Query psy3880
Match_columns 408
No_of_seqs 453 out of 3153
Neff 7.9
Searched_HMMs 46136
Date Fri Aug 16 19:45:36 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3880.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/3880hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0599|consensus 100.0 2.2E-67 4.7E-72 481.4 12.7 274 7-354 80-360 (411)
2 KOG0033|consensus 100.0 2.1E-55 4.6E-60 397.2 14.0 240 6-328 66-315 (355)
3 KOG0615|consensus 100.0 5.4E-53 1.2E-57 405.5 5.6 200 7-282 233-443 (475)
4 KOG0604|consensus 100.0 1.7E-46 3.7E-51 347.9 9.4 197 8-283 113-329 (400)
5 KOG0575|consensus 100.0 9.8E-46 2.1E-50 370.8 11.7 194 6-282 74-275 (592)
6 KOG0588|consensus 100.0 1E-45 2.3E-50 372.2 9.7 195 6-282 68-269 (786)
7 KOG0598|consensus 100.0 2.7E-44 6E-49 342.6 9.6 196 7-284 82-289 (357)
8 KOG0616|consensus 100.0 3.6E-44 7.8E-49 332.2 8.3 193 7-284 101-305 (355)
9 KOG0032|consensus 100.0 2.6E-43 5.7E-48 350.9 15.2 197 7-282 92-299 (382)
10 KOG0583|consensus 100.0 1.1E-43 2.4E-48 353.3 10.7 196 6-281 75-280 (370)
11 KOG0592|consensus 100.0 2.4E-43 5.3E-48 348.8 10.9 197 7-285 130-347 (604)
12 KOG0605|consensus 100.0 5.3E-42 1.2E-46 339.3 12.8 248 8-286 198-455 (550)
13 KOG0661|consensus 100.0 3.4E-41 7.3E-46 329.1 14.7 225 8-282 67-297 (538)
14 KOG0663|consensus 100.0 5.2E-41 1.1E-45 315.5 14.2 229 8-284 133-369 (419)
15 KOG0593|consensus 100.0 3.5E-42 7.7E-47 319.7 5.8 227 6-281 57-289 (396)
16 KOG0660|consensus 100.0 1.8E-41 3.9E-46 322.3 10.4 225 7-287 78-321 (359)
17 KOG0607|consensus 100.0 1.8E-41 3.9E-46 316.7 6.2 217 8-283 134-368 (463)
18 KOG0600|consensus 100.0 2.5E-40 5.3E-45 325.1 12.2 226 6-284 172-408 (560)
19 KOG0595|consensus 100.0 1.5E-40 3.3E-45 319.8 9.0 197 7-283 66-275 (429)
20 KOG0581|consensus 100.0 6.8E-40 1.5E-44 312.6 12.8 197 8-282 135-341 (364)
21 KOG0610|consensus 100.0 2.6E-40 5.7E-45 318.4 9.9 244 5-285 132-401 (459)
22 KOG0659|consensus 100.0 2.3E-39 4.9E-44 296.4 12.3 226 7-284 58-289 (318)
23 KOG4717|consensus 100.0 9.5E-40 2.1E-44 320.5 7.6 196 6-283 73-277 (864)
24 KOG0594|consensus 100.0 3.9E-39 8.5E-44 306.8 10.9 228 6-282 66-308 (323)
25 KOG0585|consensus 100.0 2E-39 4.3E-44 316.4 8.9 200 6-282 164-378 (576)
26 KOG0578|consensus 100.0 2.6E-39 5.7E-44 322.3 9.5 197 7-283 327-530 (550)
27 KOG0611|consensus 100.0 3.7E-39 8E-44 309.0 8.0 193 5-280 108-307 (668)
28 KOG0658|consensus 100.0 1.5E-38 3.2E-43 302.9 11.9 225 6-283 73-313 (364)
29 KOG0694|consensus 100.0 1.7E-38 3.7E-43 322.2 7.2 193 10-284 428-632 (694)
30 KOG0198|consensus 100.0 8.1E-38 1.7E-42 301.4 9.2 197 7-283 71-283 (313)
31 KOG0591|consensus 100.0 2.4E-37 5.2E-42 285.0 11.8 154 6-168 74-245 (375)
32 KOG0582|consensus 100.0 1.2E-36 2.6E-41 295.3 11.8 206 6-282 80-299 (516)
33 cd05571 STKc_PKB Catalytic dom 100.0 1E-36 2.2E-41 298.8 10.0 194 6-282 51-257 (323)
34 KOG0612|consensus 100.0 6.2E-37 1.4E-41 323.3 8.4 202 9-284 133-346 (1317)
35 cd05628 STKc_NDR1 Catalytic do 100.0 2.7E-36 5.9E-41 300.5 11.4 197 6-282 57-299 (363)
36 cd07871 STKc_PCTAIRE3 Catalyti 100.0 3.9E-36 8.4E-41 289.5 11.4 221 6-279 59-288 (288)
37 KOG0667|consensus 100.0 7.3E-36 1.6E-40 302.5 13.7 237 11-283 248-509 (586)
38 KOG0603|consensus 100.0 2.9E-36 6.2E-41 304.4 10.1 188 7-280 373-567 (612)
39 cd05585 STKc_YPK1_like Catalyt 100.0 5.9E-36 1.3E-40 291.8 11.9 194 6-282 49-253 (312)
40 KOG0690|consensus 100.0 6.2E-37 1.3E-41 286.9 4.5 191 12-284 229-432 (516)
41 cd07862 STKc_CDK6 Catalytic do 100.0 1E-35 2.2E-40 285.9 12.4 216 7-279 61-290 (290)
42 PTZ00263 protein kinase A cata 100.0 5.6E-36 1.2E-40 294.4 10.4 192 6-282 74-277 (329)
43 cd05596 STKc_ROCK Catalytic do 100.0 9.2E-36 2E-40 297.8 12.0 202 6-282 99-310 (370)
44 cd05593 STKc_PKB_gamma Catalyt 100.0 6.6E-36 1.4E-40 293.8 10.7 194 6-282 51-257 (328)
45 cd05621 STKc_ROCK2 Catalytic d 100.0 1.4E-35 3E-40 296.6 12.7 202 6-282 99-310 (370)
46 cd05625 STKc_LATS1 Catalytic d 100.0 1.1E-35 2.3E-40 298.1 11.8 243 6-282 57-311 (382)
47 PTZ00426 cAMP-dependent protei 100.0 6.5E-36 1.4E-40 295.6 9.8 192 6-282 87-290 (340)
48 cd05599 STKc_NDR_like Catalyti 100.0 1E-35 2.3E-40 295.9 11.3 235 7-282 58-302 (364)
49 KOG0597|consensus 100.0 3.4E-36 7.4E-41 298.5 7.6 193 6-282 57-257 (808)
50 KOG0614|consensus 100.0 4.4E-36 9.6E-41 294.5 8.2 197 7-283 476-684 (732)
51 cd05629 STKc_NDR_like_fungal C 100.0 1.5E-35 3.3E-40 296.5 11.3 240 7-282 58-311 (377)
52 cd05631 STKc_GRK4 Catalytic do 100.0 1.1E-35 2.3E-40 286.1 9.7 198 6-282 56-267 (285)
53 cd05612 STKc_PRKX_like Catalyt 100.0 1E-35 2.2E-40 287.2 9.1 192 6-282 57-260 (291)
54 PTZ00036 glycogen synthase kin 100.0 2.3E-35 5E-40 301.5 12.2 226 6-282 115-357 (440)
55 cd05590 STKc_nPKC_eta Catalyti 100.0 1.4E-35 2.9E-40 290.6 10.0 192 8-282 54-259 (320)
56 cd05587 STKc_cPKC Catalytic do 100.0 2.1E-35 4.6E-40 289.4 11.2 194 7-282 57-263 (324)
57 cd05626 STKc_LATS2 Catalytic d 100.0 3.8E-35 8.2E-40 294.3 13.1 242 6-283 57-312 (381)
58 KOG0580|consensus 100.0 2.9E-36 6.3E-41 272.4 4.2 193 5-281 77-278 (281)
59 cd05627 STKc_NDR2 Catalytic do 100.0 1.7E-35 3.7E-40 294.4 10.1 234 6-283 57-300 (360)
60 cd05586 STKc_Sck1_like Catalyt 100.0 1.4E-35 3.1E-40 291.2 9.1 194 8-282 54-259 (330)
61 cd07875 STKc_JNK1 Catalytic do 100.0 4E-35 8.7E-40 292.0 12.4 237 6-281 79-323 (364)
62 cd07874 STKc_JNK3 Catalytic do 100.0 9.3E-35 2E-39 288.3 14.6 238 6-282 72-317 (355)
63 cd05594 STKc_PKB_alpha Catalyt 100.0 2.3E-35 5E-40 289.3 9.6 193 7-282 52-258 (325)
64 KOG0586|consensus 100.0 4.8E-36 1E-40 301.4 4.8 195 6-282 111-312 (596)
65 cd07869 STKc_PFTAIRE1 Catalyti 100.0 6E-35 1.3E-39 283.1 12.3 226 6-282 59-294 (303)
66 cd05598 STKc_LATS Catalytic do 100.0 2.8E-35 6.1E-40 294.3 10.3 236 6-282 57-307 (376)
67 cd07859 STKc_TDY_MAPK_plant Ca 100.0 3.7E-35 8.1E-40 288.1 10.9 226 6-282 55-296 (338)
68 cd05614 STKc_MSK2_N N-terminal 100.0 2.7E-35 5.9E-40 289.3 9.6 199 7-282 61-273 (332)
69 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 4.6E-35 1E-39 287.9 11.3 195 7-282 58-263 (333)
70 cd07868 STKc_CDK8 Catalytic do 100.0 7.2E-35 1.6E-39 283.9 12.4 141 6-155 54-220 (317)
71 cd05595 STKc_PKB_beta Catalyti 100.0 2.4E-35 5.2E-40 289.2 8.9 194 6-282 51-257 (323)
72 cd07848 STKc_CDKL5 Catalytic d 100.0 4.2E-35 9E-40 281.2 10.3 225 6-279 56-287 (287)
73 cd05620 STKc_nPKC_delta Cataly 100.0 3.6E-35 7.8E-40 287.0 10.0 193 7-282 53-254 (316)
74 cd05616 STKc_cPKC_beta Catalyt 100.0 4.4E-35 9.5E-40 287.1 10.3 193 8-282 58-263 (323)
75 cd05591 STKc_nPKC_epsilon Cata 100.0 5.1E-35 1.1E-39 286.4 10.7 192 8-282 54-260 (321)
76 cd05575 STKc_SGK Catalytic dom 100.0 4.5E-35 9.8E-40 287.0 10.1 194 6-282 52-257 (323)
77 cd05584 STKc_p70S6K Catalytic 100.0 7.6E-35 1.6E-39 285.5 11.6 194 6-282 56-262 (323)
78 KOG0986|consensus 100.0 1.6E-35 3.4E-40 287.6 6.6 198 7-282 241-452 (591)
79 cd05602 STKc_SGK1 Catalytic do 100.0 5.6E-35 1.2E-39 286.6 9.9 194 6-282 52-257 (325)
80 cd05601 STKc_CRIK Catalytic do 100.0 7.3E-35 1.6E-39 286.0 10.7 202 7-282 58-269 (330)
81 cd05622 STKc_ROCK1 Catalytic d 100.0 1.1E-34 2.3E-39 290.3 12.1 202 6-282 99-310 (371)
82 cd07876 STKc_JNK2 Catalytic do 100.0 1.7E-34 3.7E-39 286.9 13.0 237 6-281 76-320 (359)
83 cd07863 STKc_CDK4 Catalytic do 100.0 1.9E-34 4.2E-39 276.5 12.7 216 7-279 59-288 (288)
84 cd05589 STKc_PKN Catalytic dom 100.0 1.1E-34 2.3E-39 284.4 10.9 194 6-282 58-263 (324)
85 cd05573 STKc_ROCK_NDR_like Cat 100.0 8.8E-35 1.9E-39 287.2 10.3 196 7-282 58-291 (350)
86 cd05604 STKc_SGK3 Catalytic do 100.0 1E-34 2.2E-39 284.7 9.0 194 6-282 52-257 (325)
87 cd05615 STKc_cPKC_alpha Cataly 100.0 1.7E-34 3.6E-39 283.2 10.5 194 7-282 57-263 (323)
88 KOG4236|consensus 100.0 4.8E-35 1E-39 288.1 6.5 196 6-282 619-825 (888)
89 cd05592 STKc_nPKC_theta_delta 100.0 1.7E-34 3.6E-39 282.3 10.1 193 7-282 53-254 (316)
90 cd05608 STKc_GRK1 Catalytic do 100.0 1.9E-34 4.2E-39 276.6 10.1 198 6-282 49-263 (280)
91 cd05603 STKc_SGK2 Catalytic do 100.0 2.1E-34 4.5E-39 281.9 10.3 194 6-282 52-257 (321)
92 cd05582 STKc_RSK_N N-terminal 100.0 1.3E-34 2.9E-39 282.9 8.7 194 6-282 54-260 (318)
93 cd05588 STKc_aPKC Catalytic do 100.0 3.4E-34 7.3E-39 281.7 11.4 201 8-282 54-268 (329)
94 cd05619 STKc_nPKC_theta Cataly 100.0 2.2E-34 4.8E-39 281.6 9.6 193 7-282 53-254 (316)
95 KOG0669|consensus 100.0 2.2E-33 4.7E-38 255.3 15.2 231 6-284 72-323 (376)
96 KOG0596|consensus 100.0 5E-34 1.1E-38 282.9 11.4 203 8-282 418-633 (677)
97 KOG0608|consensus 100.0 1.5E-34 3.3E-39 289.5 7.5 232 8-283 686-935 (1034)
98 KOG0662|consensus 100.0 1.1E-33 2.4E-38 245.9 11.8 225 7-282 58-289 (292)
99 cd05607 STKc_GRK7 Catalytic do 100.0 1.1E-33 2.3E-38 271.1 12.4 199 6-282 49-260 (277)
100 cd07872 STKc_PCTAIRE2 Catalyti 100.0 7.1E-34 1.5E-38 276.3 11.3 224 6-282 60-292 (309)
101 KOG0589|consensus 100.0 2.7E-34 5.7E-39 284.3 8.4 194 7-282 60-264 (426)
102 cd05618 STKc_aPKC_iota Catalyt 100.0 5.1E-34 1.1E-38 280.6 10.3 202 7-282 53-268 (329)
103 cd05570 STKc_PKC Catalytic dom 100.0 3.6E-34 7.9E-39 280.1 9.1 192 8-282 54-258 (318)
104 cd07878 STKc_p38beta_MAPK11 Ca 100.0 7E-34 1.5E-38 280.5 10.8 224 6-283 70-305 (343)
105 KOG0665|consensus 100.0 8.6E-34 1.9E-38 265.6 10.7 226 6-280 71-314 (369)
106 KOG0666|consensus 100.0 4.7E-34 1E-38 266.3 8.8 227 7-283 84-344 (438)
107 cd05617 STKc_aPKC_zeta Catalyt 100.0 7.6E-34 1.7E-38 279.0 10.7 199 8-282 54-266 (327)
108 PTZ00267 NIMA-related protein 100.0 8.3E-34 1.8E-38 293.0 11.1 194 6-281 121-328 (478)
109 cd05623 STKc_MRCK_alpha Cataly 100.0 1.8E-33 3.9E-38 276.8 12.9 203 7-282 58-272 (332)
110 cd07853 STKc_NLK Catalytic dom 100.0 1.9E-33 4.1E-38 280.9 12.9 226 6-282 55-294 (372)
111 KOG0577|consensus 100.0 5.7E-33 1.2E-37 276.6 15.9 201 6-285 82-287 (948)
112 cd05605 STKc_GRK4_like Catalyt 100.0 1.4E-33 2.9E-38 271.4 11.1 198 6-282 56-267 (285)
113 PHA03212 serine/threonine kina 100.0 2.2E-33 4.7E-38 282.8 13.1 222 6-282 139-382 (391)
114 PTZ00284 protein kinase; Provi 100.0 2E-33 4.3E-38 289.3 12.1 220 20-282 203-444 (467)
115 cd06649 PKc_MEK2 Catalytic dom 100.0 6.3E-33 1.4E-37 272.8 14.9 241 6-282 59-307 (331)
116 PLN00034 mitogen-activated pro 100.0 1.1E-33 2.3E-38 280.7 9.5 204 6-283 128-335 (353)
117 cd05597 STKc_DMPK_like Catalyt 100.0 3.8E-33 8.2E-38 274.5 12.9 203 7-282 58-272 (331)
118 cd07867 STKc_CDC2L6 Catalytic 100.0 3E-33 6.6E-38 272.1 12.0 141 6-155 54-220 (317)
119 cd07861 STKc_CDK1_euk Catalyti 100.0 5.8E-33 1.3E-37 265.6 12.9 220 6-279 55-285 (285)
120 KOG4645|consensus 100.0 1.2E-33 2.6E-38 301.9 8.4 200 5-282 1289-1500(1509)
121 cd05624 STKc_MRCK_beta Catalyt 100.0 4.9E-33 1.1E-37 273.7 11.3 202 7-282 58-272 (331)
122 cd07873 STKc_PCTAIRE1 Catalyti 100.0 3.7E-33 7.9E-38 270.2 9.9 224 6-282 60-292 (301)
123 cd05630 STKc_GRK6 Catalytic do 100.0 3.2E-33 6.8E-38 269.0 9.4 199 6-282 56-267 (285)
124 KOG0201|consensus 100.0 1.5E-33 3.2E-38 273.5 6.9 193 7-281 68-268 (467)
125 KOG0696|consensus 100.0 9.1E-34 2E-38 272.5 5.3 195 8-284 407-614 (683)
126 PHA03207 serine/threonine kina 100.0 1.2E-32 2.6E-37 277.3 13.7 224 6-282 142-381 (392)
127 PHA03209 serine/threonine kina 100.0 5.7E-33 1.2E-37 276.2 10.4 136 6-151 113-256 (357)
128 PHA03211 serine/threonine kina 100.0 1.7E-32 3.7E-37 281.1 12.9 221 6-281 216-460 (461)
129 KOG0579|consensus 100.0 4.3E-33 9.3E-38 278.9 7.5 202 8-282 87-295 (1187)
130 PTZ00283 serine/threonine prot 100.0 2.1E-32 4.6E-37 283.5 12.0 177 24-281 114-302 (496)
131 cd08223 STKc_Nek4 Catalytic do 100.0 1.4E-31 3.1E-36 251.9 14.5 192 6-279 55-257 (257)
132 cd05632 STKc_GRK5 Catalytic do 100.0 3.6E-32 7.7E-37 261.6 10.6 199 6-282 56-267 (285)
133 cd08227 PK_STRAD_alpha Pseudok 100.0 5.4E-32 1.2E-36 265.5 11.3 241 6-281 55-312 (327)
134 KOG0192|consensus 100.0 7.7E-32 1.7E-36 266.6 12.3 145 7-158 96-253 (362)
135 cd06625 STKc_MEKK3_like Cataly 100.0 5.7E-32 1.2E-36 255.5 10.8 193 6-279 60-263 (263)
136 KOG0983|consensus 100.0 4.3E-31 9.3E-36 242.9 16.0 201 8-282 147-355 (391)
137 cd06650 PKc_MEK1 Catalytic dom 100.0 1.6E-31 3.4E-36 263.3 14.0 237 6-282 59-305 (333)
138 cd07839 STKc_CDK5 Catalytic do 100.0 6.9E-32 1.5E-36 258.3 11.0 220 6-279 55-284 (284)
139 cd05633 STKc_GRK3 Catalytic do 100.0 5.4E-32 1.2E-36 259.7 10.2 195 8-282 55-261 (279)
140 cd07845 STKc_CDK10 Catalytic d 100.0 8.4E-32 1.8E-36 261.6 11.6 228 6-283 62-297 (309)
141 cd05611 STKc_Rim15_like Cataly 100.0 8.2E-32 1.8E-36 254.5 11.0 195 7-283 54-258 (260)
142 cd07832 STKc_CCRK Catalytic do 100.0 8.1E-32 1.8E-36 257.6 10.8 221 7-280 56-286 (286)
143 cd07850 STKc_JNK Catalytic dom 100.0 1.6E-31 3.4E-36 265.1 12.8 235 6-282 71-317 (353)
144 PHA03390 pk1 serine/threonine- 100.0 6.3E-32 1.4E-36 257.6 9.4 191 8-280 67-266 (267)
145 cd07847 STKc_CDKL1_4 Catalytic 100.0 2.4E-31 5.3E-36 254.3 13.2 223 6-279 56-286 (286)
146 PHA02988 hypothetical protein; 100.0 2.2E-31 4.8E-36 256.3 11.9 189 6-275 74-274 (283)
147 cd05572 STKc_cGK_PKG Catalytic 100.0 2.8E-31 6.1E-36 251.1 12.0 198 6-282 49-258 (262)
148 cd06643 STKc_SLK Catalytic dom 100.0 3E-31 6.5E-36 254.0 12.4 202 6-282 58-268 (282)
149 cd06637 STKc_TNIK Catalytic do 100.0 2.3E-31 5E-36 252.8 11.4 196 8-279 61-272 (272)
150 cd06636 STKc_MAP4K4_6 Catalyti 100.0 2.7E-31 5.8E-36 254.1 11.8 196 8-279 71-282 (282)
151 PHA03210 serine/threonine kina 100.0 2.6E-31 5.6E-36 275.9 12.6 223 7-282 220-460 (501)
152 cd06611 STKc_SLK_like Catalyti 100.0 5.2E-31 1.1E-35 251.9 13.6 202 6-282 58-268 (280)
153 cd06645 STKc_MAP4K3 Catalytic 100.0 2.9E-31 6.3E-36 251.7 11.5 197 6-278 62-267 (267)
154 cd06654 STKc_PAK1 Catalytic do 100.0 4.7E-31 1E-35 255.3 13.0 197 6-282 73-276 (296)
155 cd07843 STKc_CDC2L1 Catalytic 100.0 3.7E-31 8E-36 254.8 12.0 221 6-279 60-293 (293)
156 cd06610 STKc_OSR1_SPAK Catalyt 100.0 4.9E-31 1.1E-35 249.2 12.5 198 6-279 55-267 (267)
157 cd05606 STKc_beta_ARK Catalyti 100.0 3.1E-31 6.8E-36 254.1 11.3 197 7-283 54-262 (278)
158 cd07837 STKc_CdkB_plant Cataly 100.0 3.9E-31 8.5E-36 254.4 11.8 203 24-280 81-295 (295)
159 KOG0671|consensus 100.0 8.8E-32 1.9E-36 257.3 7.2 142 13-165 153-326 (415)
160 cd05102 PTKc_VEGFR3 Catalytic 100.0 6E-31 1.3E-35 258.9 13.1 103 46-154 174-280 (338)
161 PTZ00266 NIMA-related protein 100.0 2.5E-31 5.4E-36 287.4 10.8 195 6-280 68-299 (1021)
162 cd06658 STKc_PAK5 Catalytic do 100.0 2.7E-31 5.9E-36 256.6 9.9 201 6-285 75-281 (292)
163 cd06628 STKc_MAPKKK_Byr2_like 100.0 8.7E-31 1.9E-35 248.2 13.2 192 6-279 62-267 (267)
164 cd05574 STKc_phototropin_like 100.0 2.1E-31 4.5E-36 259.4 9.1 228 6-284 57-297 (316)
165 cd07860 STKc_CDK2_3 Catalytic 100.0 3E-31 6.5E-36 253.8 10.0 220 6-279 55-284 (284)
166 cd05577 STKc_GRK Catalytic dom 100.0 2.4E-31 5.2E-36 254.3 9.1 199 6-283 49-261 (277)
167 cd07844 STKc_PCTAIRE_like Cata 100.0 8.9E-31 1.9E-35 251.7 13.1 221 6-279 59-291 (291)
168 KOG0668|consensus 100.0 7.2E-31 1.6E-35 236.0 11.3 226 8-282 91-328 (338)
169 cd07849 STKc_ERK1_2_like Catal 100.0 6.5E-31 1.4E-35 258.8 11.8 226 6-283 59-299 (336)
170 cd07831 STKc_MOK Catalytic dom 100.0 8E-31 1.7E-35 250.2 12.1 217 8-279 56-282 (282)
171 cd05580 STKc_PKA Catalytic dom 100.0 4.4E-31 9.6E-36 254.2 10.2 192 6-282 57-260 (290)
172 cd07841 STKc_CDK7 Catalytic do 100.0 7.6E-31 1.6E-35 253.0 11.5 223 6-283 58-289 (298)
173 cd06619 PKc_MKK5 Catalytic dom 100.0 4.7E-31 1E-35 252.6 10.0 203 6-282 55-259 (279)
174 cd06644 STKc_STK10_LOK Catalyt 100.0 1.2E-30 2.6E-35 251.2 12.7 203 6-283 65-276 (292)
175 KOG0584|consensus 100.0 4.8E-31 1E-35 265.7 10.2 192 7-282 98-302 (632)
176 cd07855 STKc_ERK5 Catalytic do 100.0 8.7E-31 1.9E-35 257.7 11.9 223 6-284 60-302 (334)
177 cd06655 STKc_PAK2 Catalytic do 100.0 4.5E-31 9.8E-36 255.5 9.6 197 6-282 72-275 (296)
178 cd06615 PKc_MEK Catalytic doma 100.0 3E-30 6.6E-35 251.0 15.4 230 6-282 55-293 (308)
179 cd06631 STKc_YSK4 Catalytic do 100.0 1.1E-30 2.4E-35 247.4 11.9 194 6-279 58-265 (265)
180 KOG4279|consensus 100.0 6.2E-32 1.3E-36 273.0 3.4 201 5-282 627-838 (1226)
181 cd08216 PK_STRAD Pseudokinase 100.0 5.5E-31 1.2E-35 256.1 9.9 230 6-282 55-301 (314)
182 PF00069 Pkinase: Protein kina 100.0 4.6E-32 1E-36 255.2 2.1 198 7-279 55-260 (260)
183 cd06609 STKc_MST3_like Catalyt 100.0 9.6E-31 2.1E-35 249.3 11.1 195 7-282 56-257 (274)
184 cd05609 STKc_MAST Catalytic do 100.0 1.1E-30 2.3E-35 253.5 11.6 197 6-282 57-279 (305)
185 cd08226 PK_STRAD_beta Pseudoki 100.0 1.3E-30 2.8E-35 255.8 12.0 242 6-281 55-313 (328)
186 cd08529 STKc_FA2-like Catalyti 100.0 1.1E-30 2.4E-35 245.4 10.9 193 6-279 55-256 (256)
187 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 7.6E-31 1.6E-35 251.5 9.5 202 7-282 56-268 (286)
188 cd06617 PKc_MKK3_6 Catalytic d 100.0 3.2E-30 6.8E-35 246.4 13.7 200 7-282 57-267 (283)
189 cd06629 STKc_MAPKKK_Bck1_like 100.0 3E-30 6.5E-35 245.4 13.2 199 6-279 64-272 (272)
190 cd06659 STKc_PAK6 Catalytic do 100.0 8.3E-31 1.8E-35 253.8 9.3 202 6-287 74-282 (297)
191 cd07836 STKc_Pho85 Catalytic d 100.0 3.2E-30 7E-35 246.5 13.3 220 6-279 54-284 (284)
192 cd06638 STKc_myosinIIIA Cataly 100.0 2.8E-30 6E-35 247.4 12.8 197 8-279 73-286 (286)
193 cd06646 STKc_MAP4K5 Catalytic 100.0 1.2E-30 2.7E-35 247.3 10.3 198 6-278 62-267 (267)
194 cd06656 STKc_PAK3 Catalytic do 100.0 1.1E-30 2.5E-35 252.7 10.2 197 6-282 72-275 (297)
195 cd05106 PTKc_CSF-1R Catalytic 100.0 5E-30 1.1E-34 256.8 15.0 103 46-154 212-318 (374)
196 cd06639 STKc_myosinIIIB Cataly 100.0 2.4E-30 5.3E-35 248.8 12.3 197 8-280 77-291 (291)
197 cd06616 PKc_MKK4 Catalytic dom 100.0 2.2E-30 4.7E-35 248.6 11.8 202 8-282 61-273 (288)
198 cd06651 STKc_MEKK3 Catalytic d 100.0 2E-30 4.3E-35 246.3 11.4 193 6-280 60-265 (266)
199 cd07858 STKc_TEY_MAPK_plant Ca 100.0 9.4E-31 2E-35 257.9 9.5 225 6-282 60-297 (337)
200 cd07865 STKc_CDK9 Catalytic do 100.0 3.6E-30 7.7E-35 249.0 13.3 223 6-279 67-310 (310)
201 cd07842 STKc_CDK8_like Catalyt 100.0 2.1E-30 4.5E-35 251.6 11.7 145 6-156 58-221 (316)
202 PLN00009 cyclin-dependent kina 100.0 4.4E-30 9.5E-35 247.4 13.8 222 6-281 57-289 (294)
203 cd06648 STKc_PAK_II Catalytic 100.0 3.2E-30 6.9E-35 248.0 12.8 199 6-283 72-276 (285)
204 cd06612 STKc_MST1_2 Catalytic 100.0 2.9E-30 6.2E-35 242.7 12.0 193 7-279 55-256 (256)
205 KOG4721|consensus 100.0 7.7E-31 1.7E-35 260.5 8.4 190 7-277 169-365 (904)
206 PTZ00024 cyclin-dependent prot 100.0 3.9E-30 8.4E-35 252.9 13.3 225 6-285 76-322 (335)
207 cd06608 STKc_myosinIII_like Ca 100.0 1.8E-30 3.8E-35 246.2 10.4 197 8-279 61-275 (275)
208 cd08221 STKc_Nek9 Catalytic do 100.0 4.6E-30 9.9E-35 241.8 13.0 192 6-279 55-256 (256)
209 cd08220 STKc_Nek8 Catalytic do 100.0 2.7E-30 5.9E-35 242.8 11.2 192 6-279 55-256 (256)
210 cd05610 STKc_MASTL Catalytic d 100.0 8.1E-31 1.7E-35 280.7 8.5 126 6-139 60-193 (669)
211 cd07866 STKc_BUR1 Catalytic do 100.0 1.4E-30 3E-35 252.0 9.1 220 6-279 63-311 (311)
212 cd08218 STKc_Nek1 Catalytic do 100.0 4.5E-30 9.8E-35 241.8 12.1 192 6-279 55-256 (256)
213 KOG0574|consensus 100.0 1.4E-31 3.1E-36 248.7 1.5 195 9-282 86-289 (502)
214 cd08217 STKc_Nek2 Catalytic do 100.0 6.5E-30 1.4E-34 240.7 12.8 192 6-279 55-265 (265)
215 cd05576 STKc_RPK118_like Catal 100.0 1.1E-30 2.5E-35 244.4 7.5 183 8-279 43-237 (237)
216 cd06624 STKc_ASK Catalytic dom 100.0 3.8E-30 8.3E-35 244.3 11.2 196 6-279 61-268 (268)
217 cd07846 STKc_CDKL2_3 Catalytic 100.0 2.7E-30 5.8E-35 247.3 10.1 223 6-279 56-286 (286)
218 PLN03225 Serine/threonine-prot 100.0 8.8E-30 1.9E-34 267.1 14.8 183 46-283 255-457 (566)
219 cd07870 STKc_PFTAIRE2 Catalyti 100.0 3.7E-30 8E-35 247.6 11.0 142 6-156 59-209 (291)
220 KOG0197|consensus 100.0 3.7E-30 8E-35 255.9 11.2 186 7-274 258-455 (468)
221 cd07857 STKc_MPK1 Catalytic do 100.0 4.5E-30 9.7E-35 252.4 11.1 222 8-282 60-298 (332)
222 cd05118 STKc_CMGC Catalytic do 100.0 5.1E-30 1.1E-34 244.5 10.9 221 6-279 54-283 (283)
223 cd07838 STKc_CDK4_6_like Catal 100.0 1.2E-29 2.6E-34 242.5 13.4 216 7-279 58-287 (287)
224 cd07877 STKc_p38alpha_MAPK14 C 100.0 1.1E-29 2.4E-34 251.3 13.3 222 6-282 72-306 (345)
225 cd06613 STKc_MAP4K3_like Catal 100.0 6E-30 1.3E-34 241.3 10.4 198 6-278 56-262 (262)
226 cd06652 STKc_MEKK2 Catalytic d 100.0 9.4E-30 2E-34 241.3 11.8 193 6-280 60-265 (265)
227 cd07879 STKc_p38delta_MAPK13 C 100.0 5.4E-30 1.2E-34 253.1 10.3 219 6-282 70-303 (342)
228 cd06632 STKc_MEKK1_plant Catal 100.0 1.3E-29 2.8E-34 238.3 12.3 193 7-279 59-258 (258)
229 cd07851 STKc_p38 Catalytic dom 100.0 3.3E-30 7.2E-35 254.7 8.7 207 24-283 95-305 (343)
230 cd07864 STKc_CDK12 Catalytic d 100.0 1.4E-29 3E-34 244.5 12.7 221 6-279 62-302 (302)
231 cd07835 STKc_CDK1_like Catalyt 100.0 6.6E-30 1.4E-34 244.5 10.3 219 7-279 55-283 (283)
232 cd05048 PTKc_Ror Catalytic Dom 100.0 1.2E-29 2.6E-34 242.6 12.2 190 6-276 64-279 (283)
233 cd07852 STKc_MAPK15 Catalytic 100.0 3.9E-30 8.5E-35 253.2 8.9 223 8-282 65-301 (337)
234 cd05061 PTKc_InsR Catalytic do 100.0 2E-29 4.3E-34 242.5 13.6 195 6-282 65-286 (288)
235 cd05578 STKc_Yank1 Catalytic d 100.0 3.1E-30 6.8E-35 243.4 7.9 194 6-279 56-258 (258)
236 cd06607 STKc_TAO Catalytic dom 100.0 3.9E-29 8.5E-34 242.8 15.6 199 6-283 71-274 (307)
237 cd06917 STKc_NAK1_like Catalyt 100.0 7.8E-30 1.7E-34 243.2 10.4 195 8-282 60-261 (277)
238 cd08219 STKc_Nek3 Catalytic do 100.0 1E-29 2.2E-34 239.5 10.9 189 6-276 54-252 (255)
239 cd07833 STKc_CDKL Catalytic do 100.0 8.8E-30 1.9E-34 243.7 10.6 224 6-279 56-288 (288)
240 cd05104 PTKc_Kit Catalytic dom 100.0 3.4E-29 7.3E-34 250.9 15.3 103 46-154 214-320 (375)
241 cd05075 PTKc_Axl Catalytic dom 100.0 1.8E-29 3.9E-34 239.8 12.6 190 6-276 56-267 (272)
242 cd08225 STKc_Nek5 Catalytic do 100.0 1.2E-29 2.7E-34 238.5 11.2 192 6-279 55-257 (257)
243 cd07830 STKc_MAK_like Catalyti 100.0 1.2E-29 2.6E-34 242.4 11.3 218 9-279 57-283 (283)
244 cd07834 STKc_MAPK Catalytic do 100.0 6.1E-30 1.3E-34 250.6 9.4 226 6-283 55-296 (330)
245 cd06640 STKc_MST4 Catalytic do 100.0 9E-30 1.9E-34 243.4 10.3 195 6-282 58-259 (277)
246 cd05093 PTKc_TrkB Catalytic do 100.0 2.4E-29 5.1E-34 242.0 13.3 188 6-275 63-274 (288)
247 cd07880 STKc_p38gamma_MAPK12 C 100.0 1.5E-29 3.3E-34 250.1 12.1 223 6-282 70-304 (343)
248 cd06642 STKc_STK25-YSK1 Cataly 100.0 5.4E-30 1.2E-34 244.7 8.6 194 6-281 58-258 (277)
249 cd05579 STKc_MAST_like Catalyt 100.0 5E-30 1.1E-34 241.4 8.2 194 7-281 50-262 (265)
250 cd06630 STKc_MEKK1 Catalytic d 100.0 1.2E-29 2.6E-34 240.3 10.6 197 6-280 59-268 (268)
251 cd06626 STKc_MEKK4 Catalytic d 100.0 1.3E-29 2.8E-34 239.3 10.8 198 6-279 55-264 (264)
252 cd05088 PTKc_Tie2 Catalytic do 100.0 1.5E-29 3.3E-34 245.6 11.3 187 8-276 66-276 (303)
253 cd06647 STKc_PAK_I Catalytic d 100.0 7.1E-30 1.5E-34 246.7 8.7 198 6-283 72-276 (293)
254 cd05049 PTKc_Trk Catalytic dom 100.0 2.6E-29 5.6E-34 239.7 12.3 188 6-275 64-276 (280)
255 cd05096 PTKc_DDR1 Catalytic do 100.0 3.9E-29 8.5E-34 242.3 13.7 145 6-159 75-250 (304)
256 PLN03224 probable serine/threo 100.0 2.5E-29 5.4E-34 258.7 12.8 201 23-281 259-505 (507)
257 cd05089 PTKc_Tie1 Catalytic do 100.0 3E-29 6.5E-34 242.5 12.5 187 8-276 61-271 (297)
258 cd07854 STKc_MAPK4_6 Catalytic 100.0 1.3E-29 2.9E-34 250.3 10.2 206 24-282 91-306 (342)
259 cd05613 STKc_MSK1_N N-terminal 100.0 9.6E-30 2.1E-34 244.6 8.9 199 8-283 63-275 (290)
260 cd05116 PTKc_Syk Catalytic dom 100.0 3.3E-29 7.1E-34 236.7 12.3 189 6-275 52-250 (257)
261 cd07840 STKc_CDK9_like Catalyt 100.0 4.1E-29 8.9E-34 238.5 13.0 221 6-279 54-287 (287)
262 KOG0664|consensus 100.0 2E-29 4.4E-34 231.7 9.9 209 24-281 132-348 (449)
263 cd05094 PTKc_TrkC Catalytic do 100.0 4.9E-29 1.1E-33 240.1 13.1 189 5-275 62-277 (291)
264 cd05072 PTKc_Lyn Catalytic dom 100.0 4.5E-29 9.8E-34 235.9 12.5 189 6-275 57-256 (261)
265 cd05069 PTKc_Yes Catalytic dom 100.0 5.8E-29 1.2E-33 235.4 13.2 189 6-275 57-255 (260)
266 cd05062 PTKc_IGF-1R Catalytic 100.0 4.1E-29 9E-34 238.6 12.2 189 6-276 65-274 (277)
267 cd06634 STKc_TAO2 Catalytic do 100.0 8.7E-29 1.9E-33 240.7 14.7 197 6-283 71-274 (308)
268 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 6.3E-29 1.4E-33 235.0 13.2 189 6-275 57-255 (260)
269 cd06657 STKc_PAK4 Catalytic do 100.0 2E-29 4.3E-34 243.7 10.0 200 6-284 73-278 (292)
270 cd07829 STKc_CDK_like Catalyti 100.0 2.2E-29 4.8E-34 240.0 10.1 220 6-279 54-282 (282)
271 cd05108 PTKc_EGFR Catalytic do 100.0 4.4E-29 9.6E-34 243.5 12.4 190 6-276 65-264 (316)
272 cd05091 PTKc_Ror2 Catalytic do 100.0 5.6E-29 1.2E-33 238.2 12.8 189 6-276 64-279 (283)
273 cd05114 PTKc_Tec_Rlk Catalytic 100.0 6.7E-29 1.5E-33 234.2 12.7 188 6-275 55-253 (256)
274 cd05090 PTKc_Ror1 Catalytic do 100.0 6.4E-29 1.4E-33 238.0 12.7 189 6-276 63-279 (283)
275 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 3.8E-29 8.2E-34 240.4 11.2 202 6-282 55-272 (287)
276 cd06633 STKc_TAO3 Catalytic do 100.0 1E-28 2.2E-33 240.9 14.4 195 6-282 77-279 (313)
277 cd05059 PTKc_Tec_like Catalyti 100.0 7.4E-29 1.6E-33 234.1 12.9 189 6-276 55-254 (256)
278 PLN00181 protein SPA1-RELATED; 100.0 5E-29 1.1E-33 272.1 13.5 141 2-151 24-215 (793)
279 cd05052 PTKc_Abl Catalytic dom 100.0 6E-29 1.3E-33 235.7 12.3 188 6-275 58-257 (263)
280 KOG1027|consensus 100.0 1.2E-29 2.5E-34 262.0 7.9 191 8-281 561-772 (903)
281 cd05115 PTKc_Zap-70 Catalytic 100.0 6E-29 1.3E-33 235.4 12.1 189 6-275 51-250 (257)
282 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 4.8E-29 1E-33 239.2 11.2 207 6-282 59-272 (284)
283 cd06635 STKc_TAO1 Catalytic do 100.0 2.4E-28 5.2E-33 238.6 16.3 195 6-282 81-283 (317)
284 cd06605 PKc_MAPKK Catalytic do 100.0 1.4E-29 3E-34 239.5 7.0 199 7-282 56-263 (265)
285 cd05047 PTKc_Tie Catalytic dom 100.0 7.7E-29 1.7E-33 236.0 12.2 186 8-275 54-263 (270)
286 cd05109 PTKc_HER2 Catalytic do 100.0 7.6E-29 1.7E-33 237.0 12.1 189 6-275 65-263 (279)
287 cd05035 PTKc_Axl_like Catalyti 100.0 9.4E-29 2E-33 234.5 12.6 189 6-276 57-268 (273)
288 cd05054 PTKc_VEGFR Catalytic d 100.0 5.9E-29 1.3E-33 245.5 11.6 153 46-276 173-329 (337)
289 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 1.3E-28 2.8E-33 242.1 13.9 224 6-283 65-295 (328)
290 KOG1989|consensus 100.0 2.5E-29 5.5E-34 262.2 9.3 189 8-278 93-309 (738)
291 cd05064 PTKc_EphR_A10 Catalyti 100.0 8.1E-29 1.8E-33 235.5 12.0 188 6-275 62-260 (266)
292 cd05042 PTKc_Aatyk Catalytic d 100.0 1.1E-28 2.3E-33 234.5 12.6 152 6-160 51-219 (269)
293 cd05036 PTKc_ALK_LTK Catalytic 100.0 1.3E-28 2.7E-33 235.4 13.0 190 6-276 65-274 (277)
294 cd05113 PTKc_Btk_Bmx Catalytic 100.0 1.5E-28 3.2E-33 232.5 13.2 189 6-276 55-254 (256)
295 cd05060 PTKc_Syk_like Catalyti 100.0 1.5E-28 3.1E-33 232.1 13.2 189 6-275 52-250 (257)
296 cd05123 STKc_AGC Catalytic dom 100.0 4.2E-29 9.2E-34 233.9 9.1 191 6-279 49-250 (250)
297 cd05032 PTKc_InsR_like Catalyt 100.0 1.5E-28 3.3E-33 234.1 13.1 187 7-275 66-273 (277)
298 cd08222 STKc_Nek11 Catalytic d 100.0 6.2E-29 1.3E-33 234.8 10.1 191 6-279 58-260 (260)
299 cd05082 PTKc_Csk Catalytic dom 100.0 8.7E-29 1.9E-33 233.4 11.1 187 6-275 55-251 (256)
300 cd08530 STKc_CNK2-like Catalyt 100.0 1.4E-28 2.9E-33 231.0 12.4 191 6-279 55-256 (256)
301 cd06614 STKc_PAK Catalytic dom 100.0 5.7E-29 1.2E-33 238.7 10.0 198 6-283 71-277 (286)
302 cd00192 PTKc Catalytic domain 100.0 1.3E-28 2.9E-33 231.1 12.2 189 6-276 52-260 (262)
303 cd05092 PTKc_TrkA Catalytic do 100.0 1.5E-28 3.2E-33 235.5 12.6 189 6-275 63-276 (280)
304 cd08215 STKc_Nek Catalytic dom 100.0 7.7E-29 1.7E-33 232.2 10.4 193 6-279 55-258 (258)
305 cd05084 PTKc_Fes Catalytic dom 100.0 1.8E-28 3.8E-33 230.6 12.6 140 6-154 49-200 (252)
306 cd05581 STKc_PDK1 Catalytic do 100.0 5.5E-29 1.2E-33 236.8 9.2 188 9-279 61-280 (280)
307 cd05111 PTK_HER3 Pseudokinase 100.0 2.1E-28 4.5E-33 234.5 13.3 143 6-156 65-217 (279)
308 cd05071 PTKc_Src Catalytic dom 100.0 2.1E-28 4.7E-33 232.1 13.2 189 6-275 57-255 (262)
309 cd06627 STKc_Cdc7_like Catalyt 100.0 1.9E-28 4.1E-33 229.5 12.1 193 6-279 55-254 (254)
310 cd06641 STKc_MST3 Catalytic do 100.0 9.4E-29 2E-33 236.3 10.1 195 6-282 58-259 (277)
311 cd06653 STKc_MEKK3_like_1 Cata 100.0 1.3E-28 2.8E-33 233.6 10.8 193 6-279 60-264 (264)
312 cd05053 PTKc_FGFR Catalytic do 100.0 2.2E-28 4.7E-33 235.3 12.3 187 8-276 74-287 (293)
313 cd05122 PKc_STE Catalytic doma 100.0 1.8E-28 3.8E-33 228.5 11.0 192 6-278 53-253 (253)
314 cd06623 PKc_MAPKK_plant_like C 100.0 1.3E-28 2.9E-33 232.1 10.3 197 7-281 56-261 (264)
315 cd05099 PTKc_FGFR4 Catalytic d 100.0 4.2E-28 9E-33 236.5 14.0 186 8-275 76-288 (314)
316 cd06618 PKc_MKK7 Catalytic dom 100.0 1.6E-28 3.5E-33 237.1 11.0 202 8-282 72-279 (296)
317 cd05148 PTKc_Srm_Brk Catalytic 100.0 3E-28 6.5E-33 230.0 12.3 188 6-275 58-256 (261)
318 cd05058 PTKc_Met_Ron Catalytic 100.0 3.2E-28 7E-33 229.9 12.5 189 6-275 52-254 (262)
319 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 2.4E-28 5.2E-33 231.1 11.6 136 6-152 55-207 (258)
320 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 3E-28 6.5E-33 231.4 12.2 138 6-154 60-213 (262)
321 cd06606 STKc_MAPKKK Catalytic 100.0 2.4E-28 5.2E-33 228.5 11.1 193 6-279 55-260 (260)
322 cd05067 PTKc_Lck_Blk Catalytic 100.0 2.9E-28 6.4E-33 230.4 11.8 189 6-275 57-255 (260)
323 cd05101 PTKc_FGFR2 Catalytic d 100.0 2.6E-28 5.7E-33 236.5 11.6 187 8-276 79-292 (304)
324 cd05040 PTKc_Ack_like Catalyti 100.0 4.6E-28 9.9E-33 228.2 12.9 190 6-275 52-253 (257)
325 cd05583 STKc_MSK_N N-terminal 100.0 8E-29 1.7E-33 237.9 7.6 198 8-282 63-272 (288)
326 cd05055 PTKc_PDGFR Catalytic d 100.0 4.8E-28 1E-32 235.0 12.8 187 8-275 97-296 (302)
327 cd05056 PTKc_FAK Catalytic dom 100.0 3.2E-28 6.9E-33 231.4 11.2 189 6-275 63-260 (270)
328 cd05098 PTKc_FGFR1 Catalytic d 100.0 3.8E-28 8.3E-33 235.8 12.0 187 8-276 82-295 (307)
329 cd05068 PTKc_Frk_like Catalyti 100.0 1.2E-27 2.5E-32 226.4 14.5 188 6-275 57-256 (261)
330 cd05085 PTKc_Fer Catalytic dom 99.9 6.8E-28 1.5E-32 226.1 12.6 189 6-275 48-246 (250)
331 cd05086 PTKc_Aatyk2 Catalytic 99.9 7.3E-28 1.6E-32 229.2 12.9 150 6-157 51-215 (268)
332 cd05087 PTKc_Aatyk1_Aatyk3 Cat 99.9 9.1E-28 2E-32 228.3 13.4 147 6-155 51-214 (269)
333 KOG1035|consensus 99.9 1.2E-27 2.5E-32 255.2 15.5 183 22-281 669-876 (1351)
334 cd08229 STKc_Nek7 Catalytic do 99.9 2E-28 4.4E-33 231.9 8.8 191 6-275 58-260 (267)
335 cd05051 PTKc_DDR Catalytic dom 99.9 6.6E-28 1.4E-32 232.1 12.4 139 6-153 75-236 (296)
336 cd08228 STKc_Nek6 Catalytic do 99.9 2.8E-28 6.2E-33 230.9 9.5 192 6-276 58-261 (267)
337 cd05045 PTKc_RET Catalytic dom 99.9 9.1E-28 2E-32 231.0 13.1 188 6-275 59-281 (290)
338 cd05033 PTKc_EphR Catalytic do 99.9 6.7E-28 1.5E-32 228.7 11.9 189 6-276 61-261 (266)
339 cd05044 PTKc_c-ros Catalytic d 99.9 1.2E-27 2.5E-32 227.0 13.6 188 6-275 55-265 (269)
340 cd05073 PTKc_Hck Catalytic dom 99.9 7.9E-28 1.7E-32 227.6 12.2 189 6-275 57-255 (260)
341 cd05080 PTKc_Tyk2_rpt2 Catalyt 99.9 8.7E-28 1.9E-32 230.1 12.5 139 6-153 62-212 (283)
342 PHA02882 putative serine/threo 99.9 1E-27 2.3E-32 231.8 13.0 179 25-275 103-291 (294)
343 cd05039 PTKc_Csk_like Catalyti 99.9 1.2E-27 2.6E-32 225.4 12.9 187 6-275 56-251 (256)
344 KOG0670|consensus 99.9 5.8E-29 1.3E-33 245.1 3.8 211 46-281 536-751 (752)
345 cd05100 PTKc_FGFR3 Catalytic d 99.9 1.1E-27 2.4E-32 235.6 12.8 187 8-276 76-289 (334)
346 cd05050 PTKc_Musk Catalytic do 99.9 1.3E-27 2.9E-32 229.5 13.0 188 6-275 64-284 (288)
347 cd05083 PTKc_Chk Catalytic dom 99.9 9.1E-28 2E-32 226.2 11.5 187 6-275 55-249 (254)
348 KOG1151|consensus 99.9 5.3E-28 1.2E-32 234.5 9.8 203 6-283 523-748 (775)
349 cd05097 PTKc_DDR_like Catalyti 99.9 1.9E-27 4.1E-32 229.5 13.7 195 6-275 73-291 (295)
350 cd05041 PTKc_Fes_like Catalyti 99.9 1.4E-27 3.1E-32 224.0 12.5 188 6-275 48-247 (251)
351 smart00219 TyrKc Tyrosine kina 99.9 1.7E-27 3.8E-32 223.5 12.8 187 7-275 58-256 (258)
352 cd05066 PTKc_EphR_A Catalytic 99.9 1.2E-27 2.7E-32 227.2 11.9 188 6-275 61-261 (267)
353 cd05063 PTKc_EphR_A2 Catalytic 99.9 1.6E-27 3.5E-32 226.1 12.6 188 6-275 62-262 (268)
354 cd05112 PTKc_Itk Catalytic dom 99.9 1.7E-27 3.8E-32 224.2 12.6 190 6-276 55-254 (256)
355 cd05105 PTKc_PDGFR_alpha Catal 99.9 1.2E-27 2.5E-32 241.8 12.1 103 46-154 237-343 (400)
356 cd05110 PTKc_HER4 Catalytic do 99.9 2.9E-27 6.3E-32 229.4 14.4 142 6-155 65-216 (303)
357 cd08224 STKc_Nek6_Nek7 Catalyt 99.9 1.7E-27 3.6E-32 225.2 12.3 140 6-153 58-208 (267)
358 cd05079 PTKc_Jak1_rpt2 Catalyt 99.9 1.9E-27 4.1E-32 228.1 12.6 138 6-152 62-213 (284)
359 cd05034 PTKc_Src_like Catalyti 99.9 1.8E-27 3.9E-32 224.7 12.3 188 6-275 57-256 (261)
360 cd05076 PTK_Tyk2_rpt1 Pseudoki 99.9 1.5E-27 3.2E-32 228.3 11.7 138 6-154 72-225 (274)
361 cd05046 PTK_CCK4 Pseudokinase 99.9 2.2E-27 4.8E-32 226.0 12.2 190 6-276 64-272 (275)
362 cd05037 PTK_Jak_rpt1 Pseudokin 99.9 1.5E-27 3.3E-32 224.5 11.0 139 6-153 57-209 (259)
363 cd08528 STKc_Nek10 Catalytic d 99.9 2.1E-27 4.5E-32 225.5 11.9 191 6-276 65-266 (269)
364 cd05095 PTKc_DDR2 Catalytic do 99.9 3E-27 6.5E-32 228.2 13.0 143 6-157 75-240 (296)
365 cd05057 PTKc_EGFR_like Catalyt 99.9 2.8E-27 6.1E-32 226.2 12.6 189 6-275 65-263 (279)
366 cd05065 PTKc_EphR_B Catalytic 99.9 2.4E-27 5.2E-32 225.3 12.0 188 6-275 61-263 (269)
367 cd05043 PTK_Ryk Pseudokinase d 99.9 2.3E-27 5E-32 226.7 11.7 189 6-275 64-271 (280)
368 cd05103 PTKc_VEGFR2 Catalytic 99.9 2E-27 4.4E-32 234.9 11.5 103 46-154 179-285 (343)
369 KOG0695|consensus 99.9 8.5E-28 1.8E-32 226.4 7.7 200 10-283 310-523 (593)
370 PRK13184 pknD serine/threonine 99.9 8.7E-28 1.9E-32 258.9 8.6 139 6-153 58-233 (932)
371 KOG0193|consensus 99.9 1.1E-27 2.5E-32 240.2 8.7 144 9-158 447-600 (678)
372 KOG0587|consensus 99.9 7.7E-28 1.7E-32 249.7 6.6 199 8-281 74-287 (953)
373 cd05107 PTKc_PDGFR_beta Cataly 99.9 7.1E-27 1.5E-31 236.1 13.5 152 47-276 240-395 (401)
374 KOG2345|consensus 99.9 9.8E-28 2.1E-32 218.1 5.7 180 22-276 96-296 (302)
375 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 99.9 1.2E-26 2.6E-31 222.1 13.4 139 6-153 61-213 (284)
376 cd05074 PTKc_Tyro3 Catalytic d 99.9 2E-26 4.4E-31 219.0 12.2 189 6-276 57-268 (273)
377 KOG1167|consensus 99.9 6.9E-27 1.5E-31 226.4 7.8 225 20-281 106-386 (418)
378 smart00220 S_TKc Serine/Threon 99.9 1.4E-26 3.1E-31 213.9 9.0 194 7-279 44-244 (244)
379 smart00750 KIND kinase non-cat 99.9 3.5E-26 7.6E-31 203.8 10.0 94 44-155 15-108 (176)
380 PF07714 Pkinase_Tyr: Protein 99.9 1E-26 2.2E-31 220.7 6.7 188 6-275 57-257 (259)
381 KOG0194|consensus 99.9 1.2E-26 2.7E-31 233.7 6.8 189 6-275 217-415 (474)
382 KOG1026|consensus 99.9 4.8E-26 1E-30 236.9 9.8 186 6-273 545-755 (774)
383 cd05038 PTKc_Jak_rpt2 Catalyti 99.9 1.6E-25 3.4E-30 213.6 10.7 139 6-153 62-214 (284)
384 KOG1006|consensus 99.9 3.2E-26 6.9E-31 210.1 4.9 200 11-282 123-333 (361)
385 KOG4250|consensus 99.9 9.6E-26 2.1E-30 230.2 6.4 142 7-155 68-228 (732)
386 KOG1095|consensus 99.9 1E-24 2.3E-29 234.2 12.5 187 7-275 752-956 (1025)
387 KOG0590|consensus 99.9 1.7E-25 3.6E-30 235.0 4.3 203 2-282 373-591 (601)
388 KOG4257|consensus 99.9 6E-25 1.3E-29 220.7 6.1 151 7-166 448-608 (974)
389 KOG1187|consensus 99.9 1.5E-24 3.3E-29 215.5 6.2 140 6-153 127-280 (361)
390 KOG0196|consensus 99.9 2.6E-24 5.7E-29 220.9 6.0 189 6-276 686-887 (996)
391 KOG0984|consensus 99.9 1.1E-23 2.4E-28 187.2 8.3 156 8-165 102-267 (282)
392 KOG0199|consensus 99.9 8.3E-23 1.8E-27 207.6 13.2 186 7-274 168-366 (1039)
393 KOG0576|consensus 99.9 5.6E-24 1.2E-28 215.4 4.2 200 8-282 70-277 (829)
394 KOG1290|consensus 99.9 3.5E-23 7.6E-28 203.4 8.9 140 107-284 413-558 (590)
395 PLN00113 leucine-rich repeat r 99.9 1.3E-23 2.8E-28 234.3 5.7 134 6-152 739-879 (968)
396 KOG0603|consensus 99.9 1.4E-22 3.1E-27 205.3 7.5 183 11-284 57-251 (612)
397 KOG4278|consensus 99.9 1.7E-22 3.6E-27 202.9 7.7 184 7-273 320-516 (1157)
398 KOG1094|consensus 99.9 1.2E-21 2.5E-26 196.1 12.9 149 6-163 591-753 (807)
399 KOG0606|consensus 99.9 7E-22 1.5E-26 209.2 8.1 154 54-284 151-323 (1205)
400 KOG0200|consensus 99.8 1.3E-21 2.9E-26 207.2 9.5 187 8-275 360-574 (609)
401 KOG1152|consensus 99.8 3.7E-22 8.1E-27 199.4 0.9 138 9-153 628-771 (772)
402 KOG1345|consensus 99.8 1.1E-21 2.3E-26 180.9 3.3 143 5-152 75-226 (378)
403 KOG1025|consensus 99.8 1.7E-20 3.8E-25 193.7 12.1 145 5-157 753-907 (1177)
404 KOG3653|consensus 99.8 7.1E-21 1.5E-25 186.8 5.3 143 7-151 261-424 (534)
405 KOG2052|consensus 99.8 2.2E-20 4.7E-25 182.2 6.9 141 5-148 260-423 (513)
406 smart00221 STYKc Protein kinas 99.8 1.1E-19 2.5E-24 166.4 8.8 154 7-167 54-218 (225)
407 cd00180 PKc Catalytic domain o 99.8 1.2E-19 2.7E-24 162.8 8.6 109 7-118 48-166 (215)
408 KOG0965|consensus 99.8 3.7E-19 8E-24 180.6 3.9 61 347-407 878-938 (988)
409 COG0515 SPS1 Serine/threonine 99.7 3E-18 6.5E-23 162.5 8.8 141 7-152 54-212 (384)
410 KOG1024|consensus 99.7 9.8E-18 2.1E-22 161.5 10.8 151 46-275 396-550 (563)
411 KOG1033|consensus 99.7 1.6E-17 3.4E-22 166.0 6.6 113 23-146 330-457 (516)
412 KOG1240|consensus 99.7 1.4E-16 3E-21 169.7 12.9 130 19-151 91-239 (1431)
413 PRK09188 serine/threonine prot 99.7 3.1E-17 6.7E-22 162.7 4.1 124 6-135 77-210 (365)
414 KOG4158|consensus 99.6 6.3E-16 1.4E-20 149.5 10.6 161 46-279 341-516 (598)
415 KOG0590|consensus 99.6 2.8E-17 6E-22 173.1 0.1 196 9-281 80-291 (601)
416 PF14531 Kinase-like: Kinase-l 99.6 5.6E-16 1.2E-20 148.1 7.9 101 51-153 150-252 (288)
417 PRK12274 serine/threonine prot 99.6 1.4E-15 3.1E-20 138.8 4.9 139 7-156 58-212 (218)
418 KOG0606|consensus 99.5 2.9E-14 6.2E-19 152.1 7.2 228 7-286 860-1102(1205)
419 KOG1164|consensus 99.4 3.2E-13 6.8E-18 132.8 10.3 138 13-156 82-242 (322)
420 KOG1165|consensus 99.4 3.1E-13 6.7E-18 128.4 8.4 153 7-165 80-253 (449)
421 KOG1023|consensus 99.4 3.6E-13 7.9E-18 136.8 6.0 145 6-153 3-160 (484)
422 PRK10359 lipopolysaccharide co 99.4 7E-14 1.5E-18 130.0 0.3 99 23-144 117-215 (232)
423 cd05147 RIO1_euk RIO kinase fa 99.4 1.2E-13 2.5E-18 125.7 0.5 69 25-96 93-167 (190)
424 cd05145 RIO1_like RIO kinase f 99.3 2.7E-13 5.9E-18 123.1 2.4 73 24-97 92-168 (190)
425 KOG1163|consensus 99.3 2.7E-12 5.8E-17 117.4 7.7 141 22-168 84-241 (341)
426 KOG0605|consensus 99.2 9.9E-12 2.1E-16 124.6 6.1 69 103-177 346-414 (550)
427 PRK10345 hypothetical protein; 99.2 4.4E-12 9.6E-17 116.9 2.3 84 7-93 58-156 (210)
428 KOG0195|consensus 99.2 5.1E-11 1.1E-15 110.7 7.0 143 6-159 243-397 (448)
429 KOG1166|consensus 99.1 4.7E-11 1E-15 129.5 5.3 122 20-149 765-901 (974)
430 PF01585 G-patch: G-patch doma 99.1 5.3E-11 1.1E-15 81.8 3.0 32 375-406 2-33 (45)
431 smart00090 RIO RIO-like kinase 99.1 2.4E-11 5.1E-16 114.3 1.6 71 24-97 123-199 (237)
432 PRK01723 3-deoxy-D-manno-octul 99.1 3.2E-11 6.9E-16 113.6 1.8 69 25-95 122-191 (239)
433 PRK09605 bifunctional UGMP fam 99.1 4.5E-11 9.7E-16 125.5 2.4 85 6-96 392-477 (535)
434 TIGR03724 arch_bud32 Kae1-asso 99.1 3.5E-11 7.5E-16 109.4 1.2 76 15-95 63-138 (199)
435 cd05144 RIO2_C RIO kinase fami 99.1 5.2E-11 1.1E-15 108.6 2.3 72 23-97 105-176 (198)
436 PRK14879 serine/threonine prot 99.0 9.6E-11 2.1E-15 107.4 1.7 73 20-95 70-143 (211)
437 cd05119 RIO RIO kinase family, 99.0 2.1E-10 4.6E-15 103.1 1.8 72 24-97 90-165 (187)
438 smart00443 G_patch glycine ric 98.9 8E-10 1.7E-14 76.9 3.2 35 372-406 1-35 (47)
439 KOG0610|consensus 98.9 1.1E-09 2.3E-14 107.2 4.7 64 103-172 293-356 (459)
440 cd05610 STKc_MASTL Catalytic d 98.9 2.3E-09 4.9E-14 115.5 7.6 138 68-282 499-640 (669)
441 KOG1266|consensus 98.8 8.3E-10 1.8E-14 105.3 1.3 134 6-149 123-280 (458)
442 KOG0601|consensus 98.8 4E-09 8.7E-14 107.7 4.7 181 19-282 188-385 (524)
443 KOG0599|consensus 98.7 6.7E-09 1.4E-13 96.9 3.2 51 130-180 207-257 (411)
444 cd05120 APH_ChoK_like Aminogly 98.6 8.9E-09 1.9E-13 87.7 1.4 71 21-95 65-138 (155)
445 KOG2137|consensus 98.6 1.3E-07 2.9E-12 98.3 9.1 151 54-282 107-271 (700)
446 TIGR01982 UbiB 2-polyprenylphe 98.6 1.8E-08 4E-13 103.0 2.3 80 16-97 225-308 (437)
447 cd05146 RIO3_euk RIO kinase fa 98.6 2.4E-08 5.2E-13 91.0 2.6 72 23-95 98-173 (197)
448 cd05151 ChoK Choline Kinase (C 98.6 1.3E-08 2.8E-13 89.7 0.0 75 15-95 57-136 (170)
449 KOG0591|consensus 98.5 1.3E-07 2.9E-12 88.7 4.2 88 174-270 187-275 (375)
450 COG4248 Uncharacterized protei 98.4 2.7E-06 5.8E-11 84.3 13.0 108 46-154 117-225 (637)
451 smart00750 KIND kinase non-cat 98.4 2.7E-07 5.9E-12 81.7 4.8 98 177-280 66-169 (176)
452 KOG0033|consensus 98.4 3.8E-07 8.2E-12 84.2 4.9 49 131-179 192-240 (355)
453 KOG0601|consensus 98.4 2.2E-07 4.7E-12 95.2 3.1 121 22-149 339-464 (524)
454 COG3642 Mn2+-dependent serine/ 98.3 2.3E-07 5E-12 82.7 1.8 75 16-95 66-140 (204)
455 KOG0660|consensus 98.3 6.9E-07 1.5E-11 86.4 3.9 82 174-260 186-268 (359)
456 PRK04750 ubiB putative ubiquin 98.2 4E-07 8.6E-12 94.9 1.3 75 15-98 227-316 (537)
457 KOG0600|consensus 98.2 1.1E-06 2.5E-11 88.2 4.2 64 178-246 282-345 (560)
458 KOG0607|consensus 98.1 1.5E-06 3.2E-11 83.1 3.5 25 156-180 311-335 (463)
459 KOG0667|consensus 98.1 1.6E-06 3.5E-11 89.5 3.8 50 181-236 354-403 (586)
460 KOG0616|consensus 98.1 2.7E-06 6E-11 80.5 4.4 42 130-171 220-261 (355)
461 KOG0663|consensus 98.1 3E-06 6.5E-11 81.4 4.4 68 177-249 239-306 (419)
462 KOG0659|consensus 98.1 4.1E-06 8.8E-11 78.3 4.8 68 177-249 163-230 (318)
463 PTZ00284 protein kinase; Provi 98.1 2.9E-06 6.4E-11 87.6 4.1 55 176-236 306-360 (467)
464 PF06293 Kdo: Lipopolysacchari 98.1 1.7E-06 3.6E-11 79.6 2.0 70 25-95 93-170 (206)
465 KOG0604|consensus 98.0 2.3E-06 5E-11 81.1 1.9 101 64-180 189-296 (400)
466 KOG1243|consensus 98.0 5.9E-06 1.3E-10 86.0 5.0 132 6-147 65-199 (690)
467 cd07862 STKc_CDK6 Catalytic do 98.0 7.1E-06 1.5E-10 78.5 4.8 54 177-236 171-224 (290)
468 cd05623 STKc_MRCK_alpha Cataly 98.0 9.1E-06 2E-10 79.9 5.5 58 176-234 164-221 (332)
469 KOG0593|consensus 98.0 5.8E-06 1.3E-10 78.6 3.6 56 176-236 162-217 (396)
470 PHA02988 hypothetical protein; 98.0 1.1E-05 2.3E-10 77.6 5.5 49 177-229 182-230 (283)
471 PTZ00036 glycogen synthase kin 97.9 4.3E-06 9.2E-11 85.8 2.7 55 176-235 231-285 (440)
472 PRK15123 lipopolysaccharide co 97.9 3.2E-05 6.9E-10 74.1 8.3 70 24-94 110-193 (268)
473 cd07871 STKc_PCTAIRE3 Catalyti 97.9 6.8E-06 1.5E-10 78.9 3.3 64 178-246 166-229 (288)
474 KOG0615|consensus 97.9 1.4E-06 3.1E-11 85.6 -1.5 51 130-180 360-411 (475)
475 PF01163 RIO1: RIO1 family; I 97.9 3.4E-06 7.4E-11 76.4 1.0 71 24-95 81-155 (188)
476 KOG0598|consensus 97.9 1.3E-05 2.8E-10 77.9 4.7 37 133-169 207-243 (357)
477 KOG0592|consensus 97.9 1.1E-05 2.4E-10 81.9 4.2 42 131-172 267-308 (604)
478 KOG0658|consensus 97.9 1.2E-05 2.7E-10 78.0 4.0 56 176-236 186-241 (364)
479 cd07863 STKc_CDK4 Catalytic do 97.8 1.5E-05 3.3E-10 76.0 4.5 51 178-234 170-220 (288)
480 KOG0589|consensus 97.8 1.6E-05 3.5E-10 79.9 4.8 55 175-235 166-220 (426)
481 cd07875 STKc_JNK1 Catalytic do 97.8 1.3E-05 2.9E-10 79.7 4.1 55 176-236 186-240 (364)
482 cd07848 STKc_CDKL5 Catalytic d 97.8 1.7E-05 3.8E-10 75.6 4.2 52 177-234 163-214 (287)
483 KOG0588|consensus 97.8 1.6E-05 3.4E-10 82.5 4.0 40 132-171 193-232 (786)
484 KOG0582|consensus 97.8 2.1E-05 4.6E-10 78.2 4.7 63 173-239 188-250 (516)
485 PHA03212 serine/threonine kina 97.8 3.4E-05 7.4E-10 77.9 6.2 44 175-224 243-286 (391)
486 KOG0695|consensus 97.8 1.1E-05 2.4E-10 77.6 2.3 43 174-222 410-452 (593)
487 cd07874 STKc_JNK3 Catalytic do 97.8 1.7E-05 3.7E-10 78.6 3.7 54 176-235 179-232 (355)
488 KOG2384|consensus 97.8 2.4E-05 5.2E-10 69.3 4.1 44 364-407 117-160 (223)
489 cd05597 STKc_DMPK_like Catalyt 97.8 3.2E-05 6.9E-10 76.0 5.4 56 177-233 165-220 (331)
490 KOG0578|consensus 97.8 2.4E-05 5.1E-10 79.8 4.4 52 176-233 430-481 (550)
491 KOG0594|consensus 97.8 3.6E-05 7.7E-10 74.5 5.4 67 178-249 183-249 (323)
492 KOG0612|consensus 97.7 2.9E-05 6.2E-10 84.9 4.6 51 128-178 258-308 (1317)
493 KOG0201|consensus 97.7 1.5E-05 3.4E-10 79.0 2.2 129 56-226 86-216 (467)
494 KOG3087|consensus 97.7 0.00013 2.9E-09 65.2 7.8 50 46-95 113-165 (229)
495 cd07878 STKc_p38beta_MAPK11 Ca 97.7 3.4E-05 7.4E-10 76.0 4.5 54 177-235 177-230 (343)
496 cd07853 STKc_NLK Catalytic dom 97.7 2.9E-05 6.2E-10 77.6 3.8 53 178-235 167-219 (372)
497 cd06649 PKc_MEK2 Catalytic dom 97.7 2.9E-05 6.3E-10 76.2 3.8 49 176-230 163-211 (331)
498 cd07876 STKc_JNK2 Catalytic do 97.7 2.5E-05 5.5E-10 77.5 3.4 53 177-235 184-236 (359)
499 KOG0696|consensus 97.7 4E-05 8.7E-10 75.6 4.4 38 134-171 533-570 (683)
500 cd05049 PTKc_Trk Catalytic dom 97.7 3.5E-05 7.7E-10 73.1 3.9 42 179-226 188-230 (280)
No 1
>KOG0599|consensus
Probab=100.00 E-value=2.2e-67 Score=481.35 Aligned_cols=274 Identities=49% Similarity=0.839 Sum_probs=244.1
Q ss_pred cccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhCC-----HHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEE
Q psy3880 7 VAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIINS-----NPALRYIMRQLFEALEHVHNHSVVHRDLKPENILL 79 (408)
Q Consensus 7 ~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~~-----~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl 79 (408)
..||++| .+.+ +.+.+.++|+|+|..|| |||++++ ++++|.+|+|+++|++|||.++||||||||||||+
T Consensus 80 ~GHP~II-~l~D~yes~sF~FlVFdl~prGE--LFDyLts~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILl 156 (411)
T KOG0599|consen 80 MGHPYII-DLQDVYESDAFVFLVFDLMPRGE--LFDYLTSKVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILL 156 (411)
T ss_pred cCCCcEE-EeeeeccCcchhhhhhhhcccch--HHHHhhhheeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheee
Confidence 4688755 5554 67788999999999999 9999975 58999999999999999999999999999999999
Q ss_pred ecCCCEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHHH
Q psy3880 80 DDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVM 159 (408)
Q Consensus 80 ~~~~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~~ 159 (408)
+++.++||+|||+|..+.+++.+...||||+|+|||.+.++++++++
T Consensus 157 ddn~~i~isDFGFa~~l~~GekLrelCGTPgYLAPEtikC~m~e~~p--------------------------------- 203 (411)
T KOG0599|consen 157 DDNMNIKISDFGFACQLEPGEKLRELCGTPGYLAPETIKCSMYENHP--------------------------------- 203 (411)
T ss_pred ccccceEEeccceeeccCCchhHHHhcCCCcccChhheeeecccCCC---------------------------------
Confidence 99999999999999999999999999999999999999987765443
Q ss_pred HHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCCC
Q psy3880 160 LRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYS 239 (408)
Q Consensus 160 ~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~~ 239 (408)
+|+.++|+|+||||||+||.|+||||++.+..|++.|++|+|+
T Consensus 204 -------------------------------------GYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGkyq 246 (411)
T KOG0599|consen 204 -------------------------------------GYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKYQ 246 (411)
T ss_pred -------------------------------------CccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhcccc
Confidence 4666899999999999999999999999999999999999999
Q ss_pred CCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCCCCCCCcchhhhhhhHHHHHhhhhhHHHHHHHHHHHHH
Q psy3880 240 FSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQDIEPIKKDYKTASRKLSKINQLTEFQFIILVVR 319 (408)
Q Consensus 240 f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (408)
|.+|+|.++|+++||||++||++||.+|+|++|+|.||||.+....+.....+.......+++..++++.+|+.||++|+
T Consensus 247 F~speWadis~~~KdLIsrlLqVdp~~Ritake~LaHpff~q~~~~~~r~msP~~~~~~~k~qt~~~aRkrFk~ail~vr 326 (411)
T KOG0599|consen 247 FRSPEWADISATVKDLISRLLQVDPTKRITAKEALAHPFFIQIAQQQARQMSPVVEVELVKDQTSERARKRFKVAILTVR 326 (411)
T ss_pred cCCcchhhccccHHHHHHHHHeeCchhcccHHHHhcChHHHHHHHhcccccCCCcchhhhhhhhhHHhhhheeeeeehHH
Confidence 99999999999999999999999999999999999999996543222222222222344667788999999999999999
Q ss_pred HHHHHhhhcccCCccccccccccCCcchHHHHHHH
Q psy3880 320 AAVRISRLKYNHVPALSVTQGRDDPYGVKILRQYN 354 (408)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (408)
+..|+.+.++...| +..+...+|||+.|.+|+.-
T Consensus 327 a~~Ria~~~~~~~p-l~re~l~rdPyr~r~lRh~i 360 (411)
T KOG0599|consen 327 AFQRIAKYKYRVTP-LTREVLIRDPYRLRDLRHLI 360 (411)
T ss_pred HHHHHHHHhhcccc-ccHHHHhcCchhhhHHHHHH
Confidence 99999999999999 99999999999999988754
No 2
>KOG0033|consensus
Probab=100.00 E-value=2.1e-55 Score=397.24 Aligned_cols=240 Identities=37% Similarity=0.663 Sum_probs=209.0
Q ss_pred ccccCCcEEEEeccC--CcHHHHHHHHHhhchhhHHhhhC-----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEE
Q psy3880 6 MVAHSRVVVRVKEEG--DDLKHLAAQVVDKGEAAVQDIIN-----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENIL 78 (408)
Q Consensus 6 ~~~~~~~i~~~~~~~--~~~~~lv~e~~~~g~~~l~~~~~-----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NIL 78 (408)
||.||+ |+++.++. +.+.|||||+|+||+ |+.-|. ++..+..+++|||+||.|||.+||||||+||+|+|
T Consensus 66 ~LqHP~-IvrL~~ti~~~~~~ylvFe~m~G~d--l~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nll 142 (355)
T KOG0033|consen 66 KLQHPN-IVRLHDSIQEESFHYLVFDLVTGGE--LFEDIVAREFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLL 142 (355)
T ss_pred hcCCCc-EeehhhhhcccceeEEEEecccchH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhhee
Confidence 788997 66888754 456799999999999 766554 55889999999999999999999999999999999
Q ss_pred Eec---CCCEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCch
Q psy3880 79 LDD---QMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRK 155 (408)
Q Consensus 79 l~~---~~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~ 155 (408)
+.+ ...+||+|||+|..++.+.......|||+|||||+++..
T Consensus 143 LASK~~~A~vKL~~FGvAi~l~~g~~~~G~~GtP~fmaPEvvrkd----------------------------------- 187 (355)
T KOG0033|consen 143 LASKAKGAAVKLADFGLAIEVNDGEAWHGFAGTPGYLSPEVLKKD----------------------------------- 187 (355)
T ss_pred eeeccCCCceeecccceEEEeCCccccccccCCCcccCHHHhhcC-----------------------------------
Confidence 964 347999999999999866666679999999999998642
Q ss_pred hHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHh
Q psy3880 156 QMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIME 235 (408)
Q Consensus 156 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~ 235 (408)
+|+.++|||+||||+|.||.|++|||+.++..+++.|+.
T Consensus 188 -----------------------------------------py~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~ 226 (355)
T KOG0033|consen 188 -----------------------------------------PYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKA 226 (355)
T ss_pred -----------------------------------------CCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhc
Confidence 356689999999999999999999999999999999999
Q ss_pred cCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCCCCCCCcchhhhhhhHHHHHhhhhhHHHHHHHHH
Q psy3880 236 GKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQDIEPIKKDYKTASRKLSKINQLTEFQFII 315 (408)
Q Consensus 236 ~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (408)
+.|.+++++|+.+|++|+|||++||..||++|+||.|+|+|||+.... .............++++||+++++|.++
T Consensus 227 g~yd~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~HpWi~~r~----~~As~~H~~dtvd~lrkfNarRKLKgav 302 (355)
T KOG0033|consen 227 GAYDYPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALKHPWICNRE----RVASAIHRQDTVDCLKKFNARRKLKGAI 302 (355)
T ss_pred cccCCCCcccCcCCHHHHHHHHHHhccChhhhccHHHHhCCchhcchH----HHHHHhhhHHHHHHHHHhhHHHHHHHHH
Confidence 999999999999999999999999999999999999999999997642 1122344556677899999999999999
Q ss_pred HHHHHHHHHhhhc
Q psy3880 316 LVVRAAVRISRLK 328 (408)
Q Consensus 316 ~~~~~~~~~~~~~ 328 (408)
++...+.|+....
T Consensus 303 Ltav~s~r~~s~~ 315 (355)
T KOG0033|consen 303 LTTVIATRNLSTT 315 (355)
T ss_pred HHHHHhccccccC
Confidence 9998888876643
No 3
>KOG0615|consensus
Probab=100.00 E-value=5.4e-53 Score=405.46 Aligned_cols=200 Identities=38% Similarity=0.720 Sum_probs=178.2
Q ss_pred cccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhCC-----HHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEE
Q psy3880 7 VAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIINS-----NPALRYIMRQLFEALEHVHNHSVVHRDLKPENILL 79 (408)
Q Consensus 7 ~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~~-----~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl 79 (408)
|.||+ ||++++ +.++..|+||||+.||| |++.+.. +..-+.+++|||.||.|||++||+||||||+|||+
T Consensus 233 L~HP~-IV~~~d~f~~~ds~YmVlE~v~GGe--Lfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl 309 (475)
T KOG0615|consen 233 LSHPN-IVRIKDFFEVPDSSYMVLEYVEGGE--LFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILL 309 (475)
T ss_pred cCCCC-EEEEeeeeecCCceEEEEEEecCcc--HHHHHHhccccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEe
Confidence 67998 557776 55677799999999999 9999864 47789999999999999999999999999999999
Q ss_pred ecC---CCEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchh
Q psy3880 80 DDQ---MNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQ 156 (408)
Q Consensus 80 ~~~---~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~ 156 (408)
+.+ ..+||+|||+|+......-+.+.||||.|.|||++...- +
T Consensus 310 ~~~~e~~llKItDFGlAK~~g~~sfm~TlCGTpsYvAPEVl~~kg------~---------------------------- 355 (475)
T KOG0615|consen 310 SNDAEDCLLKITDFGLAKVSGEGSFMKTLCGTPSYVAPEVLASKG------V---------------------------- 355 (475)
T ss_pred ccCCcceEEEecccchhhccccceehhhhcCCccccChhheecCC------e----------------------------
Confidence 876 689999999999998888888999999999999996421 1
Q ss_pred HHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHH-HHHHHHh
Q psy3880 157 MVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMV-MLRNIME 235 (408)
Q Consensus 157 ~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~-~~~~i~~ 235 (408)
..|+.++|+||+||++|.+|+|+|||....+.. +.++|.+
T Consensus 356 ---------------------------------------~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~ 396 (475)
T KOG0615|consen 356 ---------------------------------------EYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILK 396 (475)
T ss_pred ---------------------------------------ecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhc
Confidence 123448999999999999999999998876555 8999999
Q ss_pred cCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q psy3880 236 GKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPK 282 (408)
Q Consensus 236 ~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~ 282 (408)
|.|.|.++.|..+|++++|||.+||++||++|||++|||+||||+..
T Consensus 397 G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~~~ 443 (475)
T KOG0615|consen 397 GRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALNHPWFKDA 443 (475)
T ss_pred CcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhhcc
Confidence 99999999999999999999999999999999999999999999864
No 4
>KOG0604|consensus
Probab=100.00 E-value=1.7e-46 Score=347.88 Aligned_cols=197 Identities=39% Similarity=0.692 Sum_probs=170.7
Q ss_pred ccCCcEEEEecc------CCcHHHHHHHHHhhchhhHHhhhCC-------HHHHHHHHHHHHHHHHHHHHCCCeeccCCC
Q psy3880 8 AHSRVVVRVKEE------GDDLKHLAAQVVDKGEAAVQDIINS-------NPALRYIMRQLFEALEHVHNHSVVHRDLKP 74 (408)
Q Consensus 8 ~~~~~i~~~~~~------~~~~~~lv~e~~~~g~~~l~~~~~~-------~~~~r~i~~qil~aL~~LH~~~IvHRDLKp 74 (408)
.|++ ||.+.+. +..+..+|||.++||| ||.+|.+ +.++..|++||..|+.|||+.+|.||||||
T Consensus 113 ~h~~-iV~IidVyeNs~~~rkcLLiVmE~meGGe--Lfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKp 189 (400)
T KOG0604|consen 113 GHPH-IVSIIDVYENSYQGRKCLLIVMECMEGGE--LFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKP 189 (400)
T ss_pred CCCc-eEEeehhhhhhccCceeeEeeeecccchH--HHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCCh
Confidence 5776 5565553 3445679999999999 9999864 378999999999999999999999999999
Q ss_pred CcEEEec---CCCEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCC
Q psy3880 75 ENILLDD---QMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151 (408)
Q Consensus 75 ~NILl~~---~~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf 151 (408)
||+|+.. |..+||+|||+|+.-.....+.+.|.||+|.|||++...
T Consensus 190 ENLLyt~t~~na~lKLtDfGFAK~t~~~~~L~TPc~TPyYvaPevlg~e------------------------------- 238 (400)
T KOG0604|consen 190 ENLLYTTTSPNAPLKLTDFGFAKETQEPGDLMTPCFTPYYVAPEVLGPE------------------------------- 238 (400)
T ss_pred hheeeecCCCCcceEecccccccccCCCccccCCcccccccCHHHhCch-------------------------------
Confidence 9999975 457999999999987777778899999999999998421
Q ss_pred CCchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCch----hH
Q psy3880 152 WHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRK----QM 227 (408)
Q Consensus 152 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~----~~ 227 (408)
.|+..||+||+|||||+||||+|||++.. ..
T Consensus 239 ---------------------------------------------KydkscdmwSlgVimYIlLCGyPPFYS~hg~aisp 273 (400)
T KOG0604|consen 239 ---------------------------------------------KYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISP 273 (400)
T ss_pred ---------------------------------------------hcCCCCCccchhHHHHHhhcCCCcccccCCccCCh
Confidence 35568899999999999999999997653 24
Q ss_pred HHHHHHHhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCCC
Q psy3880 228 VMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKL 283 (408)
Q Consensus 228 ~~~~~i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~~ 283 (408)
-|-++|..|.|.|+.++|+.+|+++||||++||..+|.+|+|++|+++|||+....
T Consensus 274 gMk~rI~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~~~ 329 (400)
T KOG0604|consen 274 GMKRRIRTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQYE 329 (400)
T ss_pred hHHhHhhccCccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCchhcccc
Confidence 57889999999999999999999999999999999999999999999999998753
No 5
>KOG0575|consensus
Probab=100.00 E-value=9.8e-46 Score=370.81 Aligned_cols=194 Identities=39% Similarity=0.726 Sum_probs=174.8
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC-----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEE
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN-----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENIL 78 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~-----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NIL 78 (408)
.|.|+| ||.++. |+.+..|||+|+|..|+ |-..+. +++++|++++||+.||.|||+++|||||||..|++
T Consensus 74 ~L~Hpn-IV~f~~~FEDs~nVYivLELC~~~s--L~el~Krrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlf 150 (592)
T KOG0575|consen 74 SLKHPN-IVQFYHFFEDSNNVYIVLELCHRGS--LMELLKRRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLF 150 (592)
T ss_pred hcCCCc-EEeeeeEeecCCceEEEEEecCCcc--HHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhhee
Confidence 578998 557765 77888999999999998 766554 45999999999999999999999999999999999
Q ss_pred EecCCCEEEeccccchhcccC-cccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhH
Q psy3880 79 LDDQMNVKLTDFGFARVLKKG-EKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 157 (408)
Q Consensus 79 l~~~~~iKl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~ 157 (408)
++++.++||+|||||..+... +.-.+.||||.|.|||++.. .
T Consensus 151 L~~~~~VKIgDFGLAt~le~~~Erk~TlCGTPNYIAPEVl~k------~------------------------------- 193 (592)
T KOG0575|consen 151 LNENMNVKIGDFGLATQLEYDGERKKTLCGTPNYIAPEVLNK------S------------------------------- 193 (592)
T ss_pred ecCcCcEEecccceeeeecCcccccceecCCCcccChhHhcc------C-------------------------------
Confidence 999999999999999998844 77789999999999999853 1
Q ss_pred HHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcC
Q psy3880 158 VMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 237 (408)
Q Consensus 158 ~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~ 237 (408)
+++.++||||+||+||+||+|.|||..++-.+++..|....
T Consensus 194 ---------------------------------------gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~ 234 (592)
T KOG0575|consen 194 ---------------------------------------GHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLNE 234 (592)
T ss_pred ---------------------------------------CCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhcC
Confidence 23458999999999999999999999999999999999999
Q ss_pred CCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q psy3880 238 YSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPK 282 (408)
Q Consensus 238 ~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~ 282 (408)
|.++. .+|.+|+|||.+||..||.+|||++++|.|+||+..
T Consensus 235 Y~~P~----~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff~~g 275 (592)
T KOG0575|consen 235 YSMPS----HLSAEAKDLIRKLLRPNPSERPSLDEVLDHPFFKSG 275 (592)
T ss_pred ccccc----ccCHHHHHHHHHHhcCCcccCCCHHHHhcCHhhhCC
Confidence 99986 689999999999999999999999999999999654
No 6
>KOG0588|consensus
Probab=100.00 E-value=1e-45 Score=372.23 Aligned_cols=195 Identities=34% Similarity=0.664 Sum_probs=173.0
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhCCH-----HHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEE
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIINSN-----PALRYIMRQLFEALEHVHNHSVVHRDLKPENIL 78 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~~~-----~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NIL 78 (408)
.+.|+| |+++++ +.....|+|.||+.||| ||+++.++ .+++.+++||+.||.|||..+|+||||||||+|
T Consensus 68 Li~Hpn-Vl~LydVwe~~~~lylvlEyv~gGE--LFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlL 144 (786)
T KOG0588|consen 68 LIEHPN-VLRLYDVWENKQHLYLVLEYVPGGE--LFDYLVRKGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLL 144 (786)
T ss_pred HhcCCC-eeeeeeeeccCceEEEEEEecCCch--hHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhh
Confidence 578998 557666 55567799999999999 99998764 789999999999999999999999999999999
Q ss_pred EecCCCEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHH
Q psy3880 79 LDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMV 158 (408)
Q Consensus 79 l~~~~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~ 158 (408)
++..++|||+|||+|..-.++..+.+.||+|.|.|||++.+..|.
T Consensus 145 Ld~~~nIKIADFGMAsLe~~gklLeTSCGSPHYA~PEIV~G~pYd----------------------------------- 189 (786)
T KOG0588|consen 145 LDVKNNIKIADFGMASLEVPGKLLETSCGSPHYAAPEIVSGRPYD----------------------------------- 189 (786)
T ss_pred hhcccCEeeeccceeecccCCccccccCCCcccCCchhhcCCCCC-----------------------------------
Confidence 999999999999999887788888899999999999999864321
Q ss_pred HHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCC
Q psy3880 159 MLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKY 238 (408)
Q Consensus 159 ~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~ 238 (408)
|.++|+||||||+|.||+|+.||.+++-..++.+++.|.|
T Consensus 190 ----------------------------------------G~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~f 229 (786)
T KOG0588|consen 190 ----------------------------------------GRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGVF 229 (786)
T ss_pred ----------------------------------------CCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCcc
Confidence 3378888888888888888888888888888889999998
Q ss_pred CCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q psy3880 239 SFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPK 282 (408)
Q Consensus 239 ~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~ 282 (408)
..+ ..+|++|+|||++||.+||++|+|.+|+++|||+...
T Consensus 230 ~MP----s~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~g~ 269 (786)
T KOG0588|consen 230 EMP----SNISSEAQDLLRRMLDVDPSTRITTEEILKHPFLSGY 269 (786)
T ss_pred cCC----CcCCHHHHHHHHHHhccCccccccHHHHhhCchhhcC
Confidence 887 4799999999999999999999999999999999864
No 7
>KOG0598|consensus
Probab=100.00 E-value=2.7e-44 Score=342.59 Aligned_cols=196 Identities=34% Similarity=0.645 Sum_probs=159.6
Q ss_pred cccCCcEEEEeccCCc--HHHHHHHHHhhchhhHHhhhCC-----HHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEE
Q psy3880 7 VAHSRVVVRVKEEGDD--LKHLAAQVVDKGEAAVQDIINS-----NPALRYIMRQLFEALEHVHNHSVVHRDLKPENILL 79 (408)
Q Consensus 7 ~~~~~~i~~~~~~~~~--~~~lv~e~~~~g~~~l~~~~~~-----~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl 79 (408)
+.|| +||.+.+..++ ..|||+||+.||| |+..|.+ +..+++|+.+|+.||.|||++|||||||||||||+
T Consensus 82 v~hP-Fiv~l~ysFQt~~kLylVld~~~GGe--Lf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILL 158 (357)
T KOG0598|consen 82 IKHP-FIVKLIYSFQTEEKLYLVLDYLNGGE--LFYHLQREGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILL 158 (357)
T ss_pred CCCC-cEeeeEEecccCCeEEEEEeccCCcc--HHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeee
Confidence 5555 78888876654 5799999999999 9998874 47899999999999999999999999999999999
Q ss_pred ecCCCEEEeccccchhcc-cCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHH
Q psy3880 80 DDQMNVKLTDFGFARVLK-KGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMV 158 (408)
Q Consensus 80 ~~~~~iKl~DFGla~~~~-~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~ 158 (408)
+.+|+++|+|||+|+... .+....+.|||+.|||||++... +|+
T Consensus 159 d~~GHi~LtDFgL~k~~~~~~~~t~tfcGT~eYmAPEil~~~------gy~----------------------------- 203 (357)
T KOG0598|consen 159 DEQGHIKLTDFGLCKEDLKDGDATRTFCGTPEYMAPEILLGK------GYD----------------------------- 203 (357)
T ss_pred cCCCcEEEeccccchhcccCCCccccccCCccccChHHHhcC------CCC-----------------------------
Confidence 999999999999998644 34455668999999999999752 344
Q ss_pred HHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCC
Q psy3880 159 MLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKY 238 (408)
Q Consensus 159 ~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~ 238 (408)
..||+||+||++|+||+|.|||.+.+...+.++|..++.
T Consensus 204 -----------------------------------------~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k~ 242 (357)
T KOG0598|consen 204 -----------------------------------------KAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGKL 242 (357)
T ss_pred -----------------------------------------cccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCcC
Confidence 456666666666666666666666666677777777774
Q ss_pred CCCCCcCCCCCccHHHHHHHhcccCCCCCC----CHHHHHcCCCCCCCCC
Q psy3880 239 SFSSPEWNDISEDPKDLIRKLLIVTPEDRY----SVKEALNHSFFHPKLF 284 (408)
Q Consensus 239 ~f~~~~~~~iS~~~~dLI~klL~~dP~~R~----ta~e~L~Hpwf~~~~~ 284 (408)
.+.. ..+|.+++|||+++|++||++|+ .++++.+||||.+..+
T Consensus 243 ~~~p---~~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~HpfF~~inW 289 (357)
T KOG0598|consen 243 PLPP---GYLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRHPFFKGINW 289 (357)
T ss_pred CCCC---ccCCHHHHHHHHHHhccCHHHhcCCCCChHHhhcCcccccCCH
Confidence 4332 23799999999999999999996 5899999999987644
No 8
>KOG0616|consensus
Probab=100.00 E-value=3.6e-44 Score=332.16 Aligned_cols=193 Identities=38% Similarity=0.719 Sum_probs=166.0
Q ss_pred cccCCcEEEEecc--CCcHHHHHHHHHhhchhhHHhhhCC-----HHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEE
Q psy3880 7 VAHSRVVVRVKEE--GDDLKHLAAQVVDKGEAAVQDIINS-----NPALRYIMRQLFEALEHVHNHSVVHRDLKPENILL 79 (408)
Q Consensus 7 ~~~~~~i~~~~~~--~~~~~~lv~e~~~~g~~~l~~~~~~-----~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl 79 (408)
+.|| +++.+..+ +.+..|+||||+.||| ||.++.+ ++.+|+|+.||+.||+|||+++|++|||||||||+
T Consensus 101 v~~P-Flv~l~~t~~d~~~lymvmeyv~GGE--lFS~Lrk~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLl 177 (355)
T KOG0616|consen 101 VSHP-FLVKLYGTFKDNSNLYMVMEYVPGGE--LFSYLRKSGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLL 177 (355)
T ss_pred ccCc-eeEEEEEeeccCCeEEEEEeccCCcc--HHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeee
Confidence 4566 56677754 4456799999999999 9998854 58999999999999999999999999999999999
Q ss_pred ecCCCEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHHH
Q psy3880 80 DDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVM 159 (408)
Q Consensus 80 ~~~~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~~ 159 (408)
|.+|.+||+|||+|+.+... ..+.||||.|+|||++.. .
T Consensus 178 D~~G~iKitDFGFAK~v~~r--T~TlCGTPeYLAPEii~s------k--------------------------------- 216 (355)
T KOG0616|consen 178 DQNGHIKITDFGFAKRVSGR--TWTLCGTPEYLAPEIIQS------K--------------------------------- 216 (355)
T ss_pred ccCCcEEEEeccceEEecCc--EEEecCCccccChHHhhc------C---------------------------------
Confidence 99999999999999987654 567999999999999864 2
Q ss_pred HHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCCC
Q psy3880 160 LRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYS 239 (408)
Q Consensus 160 ~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~~ 239 (408)
+|+.++|+||+||+.|+|++|+|||...+...++++|+++++.
T Consensus 217 -------------------------------------~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~v~ 259 (355)
T KOG0616|consen 217 -------------------------------------GYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGKVK 259 (355)
T ss_pred -------------------------------------CCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCccc
Confidence 3455677777777777778888888888888899999999999
Q ss_pred CCCCcCCCCCccHHHHHHHhcccCCCCCC-----CHHHHHcCCCCCCCCC
Q psy3880 240 FSSPEWNDISEDPKDLIRKLLIVTPEDRY-----SVKEALNHSFFHPKLF 284 (408)
Q Consensus 240 f~~~~~~~iS~~~~dLI~klL~~dP~~R~-----ta~e~L~Hpwf~~~~~ 284 (408)
|++ .+|++++|||+++|++|-.+|. ...++.+||||....+
T Consensus 260 fP~----~fs~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~wF~~v~W 305 (355)
T KOG0616|consen 260 FPS----YFSSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHPWFKGVDW 305 (355)
T ss_pred CCc----ccCHHHHHHHHHHHhhhhHhhhcCcCCCccccccCcccccccH
Confidence 986 5799999999999999999995 4789999999987543
No 9
>KOG0032|consensus
Probab=100.00 E-value=2.6e-43 Score=350.89 Aligned_cols=197 Identities=44% Similarity=0.801 Sum_probs=177.9
Q ss_pred cc-cCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEE
Q psy3880 7 VA-HSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILL 79 (408)
Q Consensus 7 ~~-~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl 79 (408)
|. |+| ||.+++ +..+..|+|||+|.||+ |+|.|. ++.++..+++|++.|++|||+.||+||||||||+|+
T Consensus 92 l~~hpn-iv~l~~~~e~~~~~~lvmEL~~GGe--Lfd~i~~~~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~ 168 (382)
T KOG0032|consen 92 LSGHPN-IVQLKDAFEDPDSVYLVMELCEGGE--LFDRIVKKHYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLL 168 (382)
T ss_pred ccCCCC-EEEEEEEEEcCCeEEEEEEecCCch--HHHHHHHccCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeee
Confidence 45 887 556665 56667899999999999 999874 468999999999999999999999999999999999
Q ss_pred ecC----CCEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCch
Q psy3880 80 DDQ----MNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRK 155 (408)
Q Consensus 80 ~~~----~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~ 155 (408)
... +.+|++|||+|.....+......||||+|+|||++..
T Consensus 169 ~~~~~~~~~ik~~DFGla~~~~~~~~~~~~~Gtp~y~APEvl~~------------------------------------ 212 (382)
T KOG0032|consen 169 ASKDEGSGRIKLIDFGLAKFIKPGERLHTIVGTPEYVAPEVLGG------------------------------------ 212 (382)
T ss_pred ccccCCCCcEEEeeCCCceEccCCceEeeecCCccccCchhhcC------------------------------------
Confidence 643 4799999999999888777888999999999999853
Q ss_pred hHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHh
Q psy3880 156 QMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIME 235 (408)
Q Consensus 156 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~ 235 (408)
.+|+..+||||+|||+|.||+|.+||++.+.......|..
T Consensus 213 ----------------------------------------~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~ 252 (382)
T KOG0032|consen 213 ----------------------------------------RPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILR 252 (382)
T ss_pred ----------------------------------------CCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHc
Confidence 1356689999999999999999999999999999999999
Q ss_pred cCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q psy3880 236 GKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPK 282 (408)
Q Consensus 236 ~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~ 282 (408)
+.+.|..+.|+.+|..|+|||++||.+||.+|+||.++|+|||++..
T Consensus 253 ~~~~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~HpWi~~~ 299 (382)
T KOG0032|consen 253 GDFDFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQHPWIKSI 299 (382)
T ss_pred CCCCCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcCccccCC
Confidence 99999999999999999999999999999999999999999999875
No 10
>KOG0583|consensus
Probab=100.00 E-value=1.1e-43 Score=353.33 Aligned_cols=196 Identities=36% Similarity=0.636 Sum_probs=170.2
Q ss_pred ccc-cCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhCC-----HHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcE
Q psy3880 6 MVA-HSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIINS-----NPALRYIMRQLFEALEHVHNHSVVHRDLKPENI 77 (408)
Q Consensus 6 ~~~-~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~~-----~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NI 77 (408)
.+. |+| |+++.+ +..+..|+|||||.||+ |++.+.+ +.+++.+++|++.||+|||++||+|||||||||
T Consensus 75 ~~~~Hpn-I~~l~ev~~t~~~~~ivmEy~~gGd--L~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENi 151 (370)
T KOG0583|consen 75 RLRSHPN-IIRLLEVFATPTKIYIVMEYCSGGD--LFDYIVNKGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENI 151 (370)
T ss_pred HhccCCC-EeEEEEEEecCCeEEEEEEecCCcc--HHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHE
Confidence 355 776 667776 44556899999999999 9999865 479999999999999999999999999999999
Q ss_pred EEecC-CCEEEeccccchhc-ccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCch
Q psy3880 78 LLDDQ-MNVKLTDFGFARVL-KKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRK 155 (408)
Q Consensus 78 Ll~~~-~~iKl~DFGla~~~-~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~ 155 (408)
|++.+ +++||+|||++... ..+..+.+.||||.|+|||++.+.. .|.
T Consensus 152 lld~~~~~~Kl~DFG~s~~~~~~~~~l~t~cGsp~Y~aPEvl~~~~-----~Y~-------------------------- 200 (370)
T KOG0583|consen 152 LLDGNEGNLKLSDFGLSAISPGEDGLLKTFCGSPAYAAPEVLSGKG-----TYS-------------------------- 200 (370)
T ss_pred EecCCCCCEEEeccccccccCCCCCcccCCCCCcccCCHHHhCCCC-----CcC--------------------------
Confidence 99999 99999999999988 5667788999999999999997531 021
Q ss_pred hHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHh
Q psy3880 156 QMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIME 235 (408)
Q Consensus 156 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~ 235 (408)
|.++|+|||||++|.|++|+.||...+...+++.|..
T Consensus 201 -------------------------------------------g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~ 237 (370)
T KOG0583|consen 201 -------------------------------------------GKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRK 237 (370)
T ss_pred -------------------------------------------CchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhc
Confidence 3478999999999999999999998888889999999
Q ss_pred cCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCC
Q psy3880 236 GKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHP 281 (408)
Q Consensus 236 ~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~ 281 (408)
+.+.++. |-. |+++++||++||+.||.+|+|+.++++||||+.
T Consensus 238 ~~~~~p~--~~~-S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~~~ 280 (370)
T KOG0583|consen 238 GEFKIPS--YLL-SPEARSLIEKMLVPDPSTRITLLEILEHPWFQK 280 (370)
T ss_pred CCccCCC--CcC-CHHHHHHHHHHcCCCcccCCCHHHHhhChhhcc
Confidence 9888754 333 999999999999999999999999999999997
No 11
>KOG0592|consensus
Probab=100.00 E-value=2.4e-43 Score=348.75 Aligned_cols=197 Identities=33% Similarity=0.634 Sum_probs=164.2
Q ss_pred cccCCcEEEEeccCCc--HHHHHHHHHhhchhhHHhhhCC-----HHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEE
Q psy3880 7 VAHSRVVVRVKEEGDD--LKHLAAQVVDKGEAAVQDIINS-----NPALRYIMRQLFEALEHVHNHSVVHRDLKPENILL 79 (408)
Q Consensus 7 ~~~~~~i~~~~~~~~~--~~~lv~e~~~~g~~~l~~~~~~-----~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl 79 (408)
|.+++.|++++.+++| ..|+|+||+.+|| |++.|.. +..+|+|+.||+.||+|||++|||||||||||||+
T Consensus 130 L~~hPgivkLy~TFQD~~sLYFvLe~A~nGd--ll~~i~K~Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILL 207 (604)
T KOG0592|consen 130 LSGHPGIVKLYFTFQDEESLYFVLEYAPNGD--LLDLIKKYGSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILL 207 (604)
T ss_pred hhCCCCeEEEEEEeecccceEEEEEecCCCc--HHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeE
Confidence 4344467799987766 4699999999999 9999864 47899999999999999999999999999999999
Q ss_pred ecCCCEEEeccccchhcccCccc--------------ccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHH
Q psy3880 80 DDQMNVKLTDFGFARVLKKGEKL--------------MDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLL 145 (408)
Q Consensus 80 ~~~~~iKl~DFGla~~~~~~~~~--------------~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll 145 (408)
+.++++||+|||.|+.+.+.... .+++||..|.+||+|..+
T Consensus 208 d~dmhikITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~------------------------- 262 (604)
T KOG0592|consen 208 DKDGHIKITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDS------------------------- 262 (604)
T ss_pred cCCCcEEEeeccccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCC-------------------------
Confidence 99999999999999987643211 235666666666666432
Q ss_pred hCCCCCCCchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCch
Q psy3880 146 VGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRK 225 (408)
Q Consensus 146 ~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~ 225 (408)
..+..+|+|++|||+|.|+.|.|||.+.+
T Consensus 263 ---------------------------------------------------~~~~~sDiWAlGCilyQmlaG~PPFra~N 291 (604)
T KOG0592|consen 263 ---------------------------------------------------PAGPSSDLWALGCILYQMLAGQPPFRAAN 291 (604)
T ss_pred ---------------------------------------------------CCCcccchHHHHHHHHHHhcCCCCCcccc
Confidence 12446788888888888888888888888
Q ss_pred hHHHHHHHHhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCCCCC
Q psy3880 226 QMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFD 285 (408)
Q Consensus 226 ~~~~~~~i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~~~~ 285 (408)
+..++++|+.-.|.|+. ..+++++|||+|+|+.||.+|+|++|+.+||||....++
T Consensus 292 eyliFqkI~~l~y~fp~----~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF~~Vdw~ 347 (604)
T KOG0592|consen 292 EYLIFQKIQALDYEFPE----GFPEDARDLIKKLLVRDPSDRLTSQQIKAHPFFEGVDWE 347 (604)
T ss_pred HHHHHHHHHHhcccCCC----CCCHHHHHHHHHHHccCccccccHHHHhhCcccccCChh
Confidence 88899999999999875 578999999999999999999999999999999876554
No 12
>KOG0605|consensus
Probab=100.00 E-value=5.3e-42 Score=339.30 Aligned_cols=248 Identities=29% Similarity=0.486 Sum_probs=182.7
Q ss_pred ccCCcEEEEeccCCc--HHHHHHHHHhhchhhHHhhhC-----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEe
Q psy3880 8 AHSRVVVRVKEEGDD--LKHLAAQVVDKGEAAVQDIIN-----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLD 80 (408)
Q Consensus 8 ~~~~~i~~~~~~~~~--~~~lv~e~~~~g~~~l~~~~~-----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl~ 80 (408)
.-+++||.+++.++| ..||||||+.||+ +-..|. ++..+|+|+.+++.|++.||+.|+|||||||+|+|||
T Consensus 198 ~ds~~vVKLyYsFQD~~~LYLiMEylPGGD--~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD 275 (550)
T KOG0605|consen 198 VDSPWVVKLYYSFQDKEYLYLIMEYLPGGD--MMTLLMRKDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLID 275 (550)
T ss_pred cCCCcEEEEEEEecCCCeeEEEEEecCCcc--HHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeec
Confidence 346789999986654 5789999999999 665553 5689999999999999999999999999999999999
Q ss_pred cCCCEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHHHH
Q psy3880 81 DQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVML 160 (408)
Q Consensus 81 ~~~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~~~ 160 (408)
..|++||+|||||..+....... .|.--+....... .....|.=+. ..|....+..+++
T Consensus 276 ~~GHiKLSDFGLs~gl~~~~~~~------~~~~~~~~~~~~~-----~~~~~~~~~~----------~~~~~~~~~~~~~ 334 (550)
T KOG0605|consen 276 AKGHIKLSDFGLSTGLDKKHRIE------SYRLDEQMQINLS-----EAKPSDFPKF----------NTPRSTMSRREQL 334 (550)
T ss_pred CCCCEeeccccccchhhhhhhhh------hhcchhhhhhhhc-----cCCCcccccc----------ccccchhhHHHHH
Confidence 99999999999996654322111 0110000000000 0000000000 1223333344444
Q ss_pred HHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCCCC
Q psy3880 161 RNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240 (408)
Q Consensus 161 ~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~~f 240 (408)
+........+. -...+++.|||||++..+ +|+..||+||+|||||+||.|+|||.+.++.++.++|+.....+
T Consensus 335 ~~w~~nrr~~a-~StVGTPDYiAPEVll~k------gY~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l 407 (550)
T KOG0605|consen 335 QTWKRNRRQLA-YSTVGTPDYIAPEVLLGK------GYGKECDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETL 407 (550)
T ss_pred HHHHhhhhhhh-hcccCCccccchHHHhcC------CCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhc
Confidence 43333222111 114577889999999875 78999999999999999999999999999999999999998766
Q ss_pred CCCcCCCCCccHHHHHHHhcccCCCCCCC---HHHHHcCCCCCCCCCCC
Q psy3880 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYS---VKEALNHSFFHPKLFDQ 286 (408)
Q Consensus 241 ~~~~~~~iS~~~~dLI~klL~~dP~~R~t---a~e~L~Hpwf~~~~~~~ 286 (408)
..|.-..+|++|+|||.+||+ ||++|+. ++|+..||||....++.
T Consensus 408 ~fP~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~HPfF~~v~W~~ 455 (550)
T KOG0605|consen 408 KFPEEVDLSDEAKDLITRLLC-DPENRLGSKGAEEIKKHPFFKGVDWDH 455 (550)
T ss_pred cCCCcCcccHHHHHHHHHHhc-CHHHhcCcccHHHHhcCCccccCCcch
Confidence 666667899999999999999 9999995 99999999999876543
No 13
>KOG0661|consensus
Probab=100.00 E-value=3.4e-41 Score=329.07 Aligned_cols=225 Identities=30% Similarity=0.451 Sum_probs=178.3
Q ss_pred ccCCcEEEEec---cCCcHHHHHHHHHhhchhhHHhh---hCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEec
Q psy3880 8 AHSRVVVRVKE---EGDDLKHLAAQVVDKGEAAVQDI---INSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDD 81 (408)
Q Consensus 8 ~~~~~i~~~~~---~~~~~~~lv~e~~~~g~~~l~~~---~~~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl~~ 81 (408)
+|+|+| .+.| +.+...|+|||||+-.-+.|... +.++..++.||+||++||+|+|++|+.|||+||||||+..
T Consensus 67 ~hpnii-kL~Evi~d~~~~L~fVfE~Md~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~ 145 (538)
T KOG0661|consen 67 PHPNII-KLKEVIRDNDRILYFVFEFMDCNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISG 145 (538)
T ss_pred CCCcch-hhHHHhhccCceEeeeHHhhhhhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecc
Confidence 489855 6666 33337899999998775444332 3456999999999999999999999999999999999998
Q ss_pred CCCEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHHHHH
Q psy3880 82 QMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLR 161 (408)
Q Consensus 82 ~~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~~~~ 161 (408)
+..+||+|||+|+.+......++++.|++|+|||++... ..|+.++|+||+|||++|+.+-++.|.|.++.+++.
T Consensus 146 ~~~iKiaDFGLARev~SkpPYTeYVSTRWYRAPEvLLrs-----~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~ 220 (538)
T KOG0661|consen 146 NDVIKIADFGLAREVRSKPPYTEYVSTRWYRAPEVLLRS-----GYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIY 220 (538)
T ss_pred cceeEecccccccccccCCCcchhhhcccccchHHhhhc-----cccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHH
Confidence 889999999999999888888899999999999999864 569999999999999999999999999999999999
Q ss_pred HHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCCCCC
Q psy3880 162 NIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFS 241 (408)
Q Consensus 162 ~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~~f~ 241 (408)
+|++--.++.. +.|--|--+..-+.=..|+........+
T Consensus 221 KIc~VLGtP~~------------------------------~~~~eg~~La~~mnf~~P~~~~~~l~~L----------- 259 (538)
T KOG0661|consen 221 KICEVLGTPDK------------------------------DSWPEGYNLASAMNFRFPQVKPSPLKDL----------- 259 (538)
T ss_pred HHHHHhCCCcc------------------------------ccchhHHHHHHHhccCCCcCCCCChHHh-----------
Confidence 99875444333 3333332222222222233222211111
Q ss_pred CCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q psy3880 242 SPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPK 282 (408)
Q Consensus 242 ~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~ 282 (408)
....|+++.+||.+||.+||.+||||.|||+||||+..
T Consensus 260 ---~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~pffq~~ 297 (538)
T KOG0661|consen 260 ---LPNASSEAASLIERLLAWDPDKRPTASQALQHPFFQVG 297 (538)
T ss_pred ---CcccCHHHHHHHHHHhcCCCccCccHHHHhcCcccccc
Confidence 13479999999999999999999999999999999753
No 14
>KOG0663|consensus
Probab=100.00 E-value=5.2e-41 Score=315.46 Aligned_cols=229 Identities=30% Similarity=0.456 Sum_probs=180.6
Q ss_pred ccCCcEEEEec--cC--CcHHHHHHHHHhhchhhHHhhhC---CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEe
Q psy3880 8 AHSRVVVRVKE--EG--DDLKHLAAQVVDKGEAAVQDIIN---SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLD 80 (408)
Q Consensus 8 ~~~~~i~~~~~--~~--~~~~~lv~e~~~~g~~~l~~~~~---~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl~ 80 (408)
-|+| ||++.+ .+ -|..|+|||||+..-.+|.+-.. +..+++.++.|+|.||+|||++.|+||||||+|+|++
T Consensus 133 ~H~N-IV~vkEVVvG~~~d~iy~VMe~~EhDLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~ 211 (419)
T KOG0663|consen 133 RHPN-IVEVKEVVVGSNMDKIYIVMEYVEHDLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLS 211 (419)
T ss_pred CCCC-eeeeEEEEeccccceeeeeHHHHHhhHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeec
Confidence 3676 667776 23 35589999999988666666543 3489999999999999999999999999999999999
Q ss_pred cCCCEEEeccccchhcccC-cccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHHH
Q psy3880 81 DQMNVKLTDFGFARVLKKG-EKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVM 159 (408)
Q Consensus 81 ~~~~iKl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~~ 159 (408)
+.|.+||+|||+|+.+... ..++..+.|.+|+|||++.+ +..|++++|+||+|||+.||+++++.|.+..+.++
T Consensus 212 ~~G~lKiaDFGLAR~ygsp~k~~T~lVVTLWYRaPELLLG-----~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQ 286 (419)
T KOG0663|consen 212 HKGILKIADFGLAREYGSPLKPYTPLVVTLWYRAPELLLG-----AKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQ 286 (419)
T ss_pred cCCcEEecccchhhhhcCCcccCcceEEEeeecCHHHhcC-----CcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHH
Confidence 9999999999999998754 34556788999999999987 47899999999999999999999999999999999
Q ss_pred HHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCCC
Q psy3880 160 LRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYS 239 (408)
Q Consensus 160 ~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~~ 239 (408)
+.+|..-...++...|.+++..-+--.+ -.-..|+ +.....
T Consensus 287 l~~If~llGtPte~iwpg~~~lp~~k~~---------------------------~f~~~py----------n~lr~k-- 327 (419)
T KOG0663|consen 287 LDKIFKLLGTPSEAIWPGYSELPAVKKM---------------------------TFSEHPY----------NNLRKK-- 327 (419)
T ss_pred HHHHHHHhCCCccccCCCccccchhhcc---------------------------ccCCCCc----------hhhhhh--
Confidence 9999887777777777665432110000 0000011 111111
Q ss_pred CCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCCCC
Q psy3880 240 FSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLF 284 (408)
Q Consensus 240 f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~~~ 284 (408)
|. +..+|+.+.||+.++|.+||.+|+||+|+|+|.||.....
T Consensus 328 F~---~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e~P~ 369 (419)
T KOG0663|consen 328 FG---ALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRETPL 369 (419)
T ss_pred cc---ccccchhHHHHHHHHhccCccccccHHHhhcccccccCCC
Confidence 11 1227899999999999999999999999999999987543
No 15
>KOG0593|consensus
Probab=100.00 E-value=3.5e-42 Score=319.66 Aligned_cols=227 Identities=31% Similarity=0.464 Sum_probs=173.4
Q ss_pred ccccCCcEEEEeccCC--cHHHHHHHHHhhchhhHHhh---hCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEe
Q psy3880 6 MVAHSRVVVRVKEEGD--DLKHLAAQVVDKGEAAVQDI---INSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLD 80 (408)
Q Consensus 6 ~~~~~~~i~~~~~~~~--~~~~lv~e~~~~g~~~l~~~---~~~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl~ 80 (408)
+|.|+|+| .+.|... ...|||||||+..-....+. -.....++.+++|++.|+.|||+++||||||||||||++
T Consensus 57 qLkH~NLV-nLiEVFrrkrklhLVFE~~dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit 135 (396)
T KOG0593|consen 57 QLKHENLV-NLIEVFRRKRKLHLVFEYCDHTVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILIT 135 (396)
T ss_pred hcccchHH-HHHHHHHhcceeEEEeeecchHHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEe
Confidence 57788844 7777543 45699999998764111221 124478999999999999999999999999999999999
Q ss_pred cCCCEEEeccccchhcc-cCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHHH
Q psy3880 81 DQMNVKLTDFGFARVLK-KGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVM 159 (408)
Q Consensus 81 ~~~~iKl~DFGla~~~~-~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~~ 159 (408)
.++.+||||||+|+.+. +++..++++.|.+|+|||.+.+. ..|++++||||+||++.||++|.+.|.+.++.++
T Consensus 136 ~~gvvKLCDFGFAR~L~~pgd~YTDYVATRWYRaPELLvGD-----tqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQ 210 (396)
T KOG0593|consen 136 QNGVVKLCDFGFARTLSAPGDNYTDYVATRWYRAPELLVGD-----TQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQ 210 (396)
T ss_pred cCCcEEeccchhhHhhcCCcchhhhhhhhhhccChhhhccc-----CcCCCcccchhhhHHHHHHhcCCcCCCCcchHHH
Confidence 99999999999999998 77777889999999999999864 7899999999999999999999999999999999
Q ss_pred HHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCCC
Q psy3880 160 LRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYS 239 (408)
Q Consensus 160 ~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~~ 239 (408)
+..|...-.. +.|+.. -+.+..||++.-.... + ....
T Consensus 211 Ly~I~ktLG~------------L~prhq--------------------------~iF~~N~~F~Gv~lP~---~--~~~e 247 (396)
T KOG0593|consen 211 LYLIRKTLGN------------LIPRHQ--------------------------SIFSSNPFFHGVRLPE---P--EHPE 247 (396)
T ss_pred HHHHHHHHcc------------cCHHHH--------------------------HHhccCCceeeeecCC---C--CCcc
Confidence 9888653222 122211 1222333332110000 0 0000
Q ss_pred CCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCC
Q psy3880 240 FSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHP 281 (408)
Q Consensus 240 f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~ 281 (408)
.....+..+|.-+.||+++||..||++|+|++|+|+||||+.
T Consensus 248 pLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H~yFd~ 289 (396)
T KOG0593|consen 248 PLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHHPYFDG 289 (396)
T ss_pred chhhhcccchHHHHHHHHHHhcCCccccccHHHHhcChHHHH
Confidence 001124578889999999999999999999999999999944
No 16
>KOG0660|consensus
Probab=100.00 E-value=1.8e-41 Score=322.28 Aligned_cols=225 Identities=28% Similarity=0.480 Sum_probs=172.1
Q ss_pred cccCCcEEEEecc-----CC--cHHHHHHHHHhhchhhHHhhhCC-----HHHHHHHHHHHHHHHHHHHHCCCeeccCCC
Q psy3880 7 VAHSRVVVRVKEE-----GD--DLKHLAAQVVDKGEAAVQDIINS-----NPALRYIMRQLFEALEHVHNHSVVHRDLKP 74 (408)
Q Consensus 7 ~~~~~~i~~~~~~-----~~--~~~~lv~e~~~~g~~~l~~~~~~-----~~~~r~i~~qil~aL~~LH~~~IvHRDLKp 74 (408)
+.|+|+| .+.+. .+ +..|+|+|+|+. + |...+.+ +..++++++|||.||.|+|+.+|+||||||
T Consensus 78 ~~HeNIi-~l~di~~p~~~~~f~DvYiV~elMet-D--L~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKP 153 (359)
T KOG0660|consen 78 LRHENII-GLLDIFRPPSRDKFNDVYLVFELMET-D--LHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKP 153 (359)
T ss_pred hcCCCcc-eEEeecccccccccceeEEehhHHhh-H--HHHHHHcCccccHHHHHHHHHHHHHhcchhhcccccccccch
Confidence 4599866 43331 11 346999999943 3 7666643 478999999999999999999999999999
Q ss_pred CcEEEecCCCEEEeccccchhccc---CcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCC
Q psy3880 75 ENILLDDQMNVKLTDFGFARVLKK---GEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151 (408)
Q Consensus 75 ~NILl~~~~~iKl~DFGla~~~~~---~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf 151 (408)
.|+|++.++.+||+|||+|+.... ...++.++.|.+|+|||++.. ...|++++||||+|||++||++|++.|
T Consensus 154 sNll~n~~c~lKI~DFGLAR~~~~~~~~~~mTeYVaTRWYRAPElll~-----~~~Yt~aiDiWSvGCI~AEmL~gkplF 228 (359)
T KOG0660|consen 154 SNLLLNADCDLKICDFGLARYLDKFFEDGFMTEYVATRWYRAPELLLN-----SSEYTKAIDIWSVGCILAEMLTGKPLF 228 (359)
T ss_pred hheeeccCCCEEeccccceeeccccCcccchhcceeeeeecCHHHHhc-----cccccchhhhhhhhHHHHHHHcCCCCC
Confidence 999999999999999999998864 344567899999999999975 367999999999999999999999999
Q ss_pred CCchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHH
Q psy3880 152 WHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLR 231 (408)
Q Consensus 152 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~ 231 (408)
.|.+...++..|+.--.++ ++|.+..-..+ -.+
T Consensus 229 pG~d~v~Ql~lI~~~lGtP------------~~e~l~~i~s~-----------------------------------~ar 261 (359)
T KOG0660|consen 229 PGKDYVHQLQLILELLGTP------------SEEDLQKIRSE-----------------------------------KAR 261 (359)
T ss_pred CCCchHHHHHHHHHhcCCC------------CHHHHHHhccH-----------------------------------HHH
Confidence 9999999999998754333 22222211000 000
Q ss_pred HHHhcCCCCCC----CcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCCCCCCC
Q psy3880 232 NIMEGKYSFSS----PEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQD 287 (408)
Q Consensus 232 ~i~~~~~~f~~----~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~~~~~~ 287 (408)
..++.....+. ..++.++++|.||+.|||++||.+|+||+|||+|||+.+...+.+
T Consensus 262 ~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~hdp~d 321 (359)
T KOG0660|consen 262 PYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPYHDPED 321 (359)
T ss_pred HHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhhcCCcc
Confidence 11111111111 124678999999999999999999999999999999987654433
No 17
>KOG0607|consensus
Probab=100.00 E-value=1.8e-41 Score=316.70 Aligned_cols=217 Identities=32% Similarity=0.565 Sum_probs=166.7
Q ss_pred ccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC-----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEe
Q psy3880 8 AHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN-----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLD 80 (408)
Q Consensus 8 ~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~-----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl~ 80 (408)
.|.|++ .+.+ |+++.+|||||-+.||. |..+|. ++.+++.+++.|+.||.|||.+||.||||||||||..
T Consensus 134 gh~nil-qLiefFEdd~~FYLVfEKm~GGp--lLshI~~~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~ 210 (463)
T KOG0607|consen 134 GHKNIL-QLIEFFEDDTRFYLVFEKMRGGP--LLSHIQKRKHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCE 210 (463)
T ss_pred CCccHH-HHHHHhcccceEEEEEecccCch--HHHHHHHhhhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeec
Confidence 477754 5554 77888999999999998 777765 4479999999999999999999999999999999997
Q ss_pred cC---CCEEEeccccchhcccCc--------ccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCC
Q psy3880 81 DQ---MNVKLTDFGFARVLKKGE--------KLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCP 149 (408)
Q Consensus 81 ~~---~~iKl~DFGla~~~~~~~--------~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~ 149 (408)
+. ..+|||||.++..+.... .+.+.||+..|||||+...- ..++..|++++|.||||||+|.|++|++
T Consensus 211 ~pn~vsPvKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~f-v~qA~~YDKrCDlwSLGvIlYImLsGYp 289 (463)
T KOG0607|consen 211 SPNKVSPVKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVF-VDQATFYDKRCDLWSLGVILYIMLSGYP 289 (463)
T ss_pred CCCCcCceeeeccccccccccCCCCCCCCCccccCcccchhhcchhHHhhh-ccccccccccccHHHHHHHHHHHHhCCC
Confidence 54 468999998876543221 34567888899999986431 2234556666666666666666666666
Q ss_pred CCCCchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHH
Q psy3880 150 PFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVM 229 (408)
Q Consensus 150 pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~ 229 (408)
||.+... +---|+-|-.. ..-+..+
T Consensus 290 PFvG~Cg--------------------------------------------~dCGWdrGe~C-----------r~CQ~~L 314 (463)
T KOG0607|consen 290 PFVGHCG--------------------------------------------ADCGWDRGEVC-----------RVCQNKL 314 (463)
T ss_pred CccCccC--------------------------------------------CcCCccCCCcc-----------HHHHHHH
Confidence 6654321 11134333211 1136678
Q ss_pred HHHHHhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCCC
Q psy3880 230 LRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKL 283 (408)
Q Consensus 230 ~~~i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~~ 283 (408)
++.|.+|.|.|+..+|..+|.+++|||+++|..|+.+|.+|.+.|+|||++...
T Consensus 315 FesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnhPw~~~~~ 368 (463)
T KOG0607|consen 315 FESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNHPWVQRCA 368 (463)
T ss_pred HHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCCccccccc
Confidence 999999999999999999999999999999999999999999999999998754
No 18
>KOG0600|consensus
Probab=100.00 E-value=2.5e-40 Score=325.10 Aligned_cols=226 Identities=27% Similarity=0.456 Sum_probs=176.0
Q ss_pred ccccCCcEEEEec----cCCcHHHHHHHHHhhchhhHHh---hhCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEE
Q psy3880 6 MVAHSRVVVRVKE----EGDDLKHLAAQVVDKGEAAVQD---IINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENIL 78 (408)
Q Consensus 6 ~~~~~~~i~~~~~----~~~~~~~lv~e~~~~g~~~l~~---~~~~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NIL 78 (408)
-|.|+|+| .+.+ .....+|||||||+....-|.. .-.++++++.||+||+.||+|||++||+|||||.+|||
T Consensus 172 ~l~HpNIi-kL~eivt~~~~~siYlVFeYMdhDL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiL 250 (560)
T KOG0600|consen 172 RLDHPNII-KLEEIVTSKLSGSIYLVFEYMDHDLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNIL 250 (560)
T ss_pred hcCCCccc-ceeeEEEecCCceEEEEEecccchhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceE
Confidence 37899855 6554 2235689999999876322222 23466999999999999999999999999999999999
Q ss_pred EecCCCEEEeccccchhcccCc--ccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchh
Q psy3880 79 LDDQMNVKLTDFGFARVLKKGE--KLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQ 156 (408)
Q Consensus 79 l~~~~~iKl~DFGla~~~~~~~--~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~ 156 (408)
|+++|.+||+|||||+.+.... .++..+.|.+|+|||+|++ .+.|+.++|+||+|||+.||++|++.|.+.++
T Consensus 251 idn~G~LKiaDFGLAr~y~~~~~~~~T~rVvTLWYRpPELLLG-----~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tE 325 (560)
T KOG0600|consen 251 IDNNGVLKIADFGLARFYTPSGSAPYTSRVVTLWYRPPELLLG-----ATSYGTAVDLWSVGCILAELFLGKPILQGRTE 325 (560)
T ss_pred EcCCCCEEeccccceeeccCCCCcccccceEEeeccChHHhcC-----CcccccceeehhhhHHHHHHHcCCCCcCCccH
Confidence 9999999999999999776544 4567889999999999997 47899999999999999999999999999999
Q ss_pred HHHHHHHHhccccCCCCCCc--cCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHH
Q psy3880 157 MVMLRNIMEGKYSFSSPEWN--DISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIM 234 (408)
Q Consensus 157 ~~~~~~i~~~~~~~~~~~~~--~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~ 234 (408)
.+++.+|..-..++....|. ++..+ ...-|... ....+
T Consensus 326 veQl~kIfklcGSP~e~~W~~~kLP~~----------------------------------~~~kp~~~------y~r~l 365 (560)
T KOG0600|consen 326 VEQLHKIFKLCGSPTEDYWPVSKLPHA----------------------------------TIFKPQQP------YKRRL 365 (560)
T ss_pred HHHHHHHHHHhCCCChhccccccCCcc----------------------------------cccCCCCc------ccchH
Confidence 99999998766665544444 11100 01111110 01111
Q ss_pred hcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCCCC
Q psy3880 235 EGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLF 284 (408)
Q Consensus 235 ~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~~~ 284 (408)
. +.+..+++.+.+|+.+||.+||.+|.||.++|+|+||.....
T Consensus 366 ~-------E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF~t~p~ 408 (560)
T KOG0600|consen 366 R-------ETFKDFPASALDLLEKLLSLDPDKRGTASSALQSEYFTTEPL 408 (560)
T ss_pred H-------HHhccCCHHHHHHHHHHhccCccccccHHHHhcCcccccCCC
Confidence 1 113467999999999999999999999999999999965443
No 19
>KOG0595|consensus
Probab=100.00 E-value=1.5e-40 Score=319.82 Aligned_cols=197 Identities=35% Similarity=0.640 Sum_probs=157.5
Q ss_pred cccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhCC-----HHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEE
Q psy3880 7 VAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIINS-----NPALRYIMRQLFEALEHVHNHSVVHRDLKPENILL 79 (408)
Q Consensus 7 ~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~~-----~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl 79 (408)
+.|+| ||++.+ +.+|+.|||||||+||+ |.++|.+ ++.+|.++.||+.||++||+++||||||||+|||+
T Consensus 66 l~H~n-IV~l~d~~~~~~~i~lVMEyC~gGD--Ls~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLL 142 (429)
T KOG0595|consen 66 LKHPN-IVRLLDCIEDDDFIYLVMEYCNGGD--LSDYIRRRGRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILL 142 (429)
T ss_pred cCCcc-eeeEEEEEecCCeEEEEEEeCCCCC--HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEe
Confidence 67998 457665 67889999999999999 8888754 48999999999999999999999999999999999
Q ss_pred ecC------CCEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCC
Q psy3880 80 DDQ------MNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH 153 (408)
Q Consensus 80 ~~~------~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~ 153 (408)
+.. -.+||+|||+|+.+.++....+.||||.|||||++.. ..|+.|+|+||+|+|+|++++|++|
T Consensus 143 s~~~~~~~~~~LKIADFGfAR~L~~~~~a~tlcGSplYMAPEV~~~------~~YdAKADLWSiG~Ilyq~l~g~~P--- 213 (429)
T KOG0595|consen 143 STTARNDTSPVLKIADFGFARFLQPGSMAETLCGSPLYMAPEVIMS------QQYDAKADLWSIGTILYQCLTGKPP--- 213 (429)
T ss_pred ccCCCCCCCceEEecccchhhhCCchhHHHHhhCCccccCHHHHHh------ccccchhhHHHHHHHHHHHHhCCCC---
Confidence 764 4589999999999999888889999999999999974 3455555555555555555555555
Q ss_pred chhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHH
Q psy3880 154 RKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI 233 (408)
Q Consensus 154 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i 233 (408)
|...+..+++..+
T Consensus 214 -------------------------------------------------------------------f~a~t~~eL~~~~ 226 (429)
T KOG0595|consen 214 -------------------------------------------------------------------FDAETPKELLLYI 226 (429)
T ss_pred -------------------------------------------------------------------ccccCHHHHHHHH
Confidence 4444555555555
Q ss_pred HhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCCC
Q psy3880 234 MEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKL 283 (408)
Q Consensus 234 ~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~~ 283 (408)
..+....+... ..+|+...+|+..+|+.||.+|.+..+-+.|++.....
T Consensus 227 ~k~~~~~~~~~-~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~~~~~l~~~p 275 (429)
T KOG0595|consen 227 KKGNEIVPVLP-AELSNPLRELLISLLQRNPKDRISFEDFFDHPFLAANP 275 (429)
T ss_pred hccccccCchh-hhccCchhhhhhHHHhcCccccCchHHhhhhhhcccCc
Confidence 55554433322 35788888999999999999999999999999998754
No 20
>KOG0581|consensus
Probab=100.00 E-value=6.8e-40 Score=312.64 Aligned_cols=197 Identities=24% Similarity=0.480 Sum_probs=157.7
Q ss_pred ccCCcEEEEecc--CCc-HHHHHHHHHhhchhhHHhhhC-----CHHHHHHHHHHHHHHHHHHHH-CCCeeccCCCCcEE
Q psy3880 8 AHSRVVVRVKEE--GDD-LKHLAAQVVDKGEAAVQDIIN-----SNPALRYIMRQLFEALEHVHN-HSVVHRDLKPENIL 78 (408)
Q Consensus 8 ~~~~~i~~~~~~--~~~-~~~lv~e~~~~g~~~l~~~~~-----~~~~~r~i~~qil~aL~~LH~-~~IvHRDLKp~NIL 78 (408)
.|| +||.++.. .+. ..+|+||||+||. |-+.+. .++.+..++.+|++||.|||. ++||||||||+|||
T Consensus 135 ~sp-yIV~~ygaF~~~~~~isI~mEYMDgGS--Ld~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlL 211 (364)
T KOG0581|consen 135 QSP-YIVGFYGAFYSNGEEISICMEYMDGGS--LDDILKRVGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLL 211 (364)
T ss_pred CCC-CeeeEeEEEEeCCceEEeehhhcCCCC--HHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHee
Confidence 455 57787753 233 4789999999998 666553 568899999999999999995 99999999999999
Q ss_pred EecCCCEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHH
Q psy3880 79 LDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMV 158 (408)
Q Consensus 79 l~~~~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~ 158 (408)
++..|.|||||||.++.+.++ ...+++||..|||||.+.+ ..|+.++||||||+.+.|+++|+.||....
T Consensus 212 vNskGeVKicDFGVS~~lvnS-~a~tfvGT~~YMsPERi~g------~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~--- 281 (364)
T KOG0581|consen 212 VNSKGEVKICDFGVSGILVNS-IANTFVGTSAYMSPERISG------ESYSVKSDIWSLGLSLLELAIGRFPYPPPN--- 281 (364)
T ss_pred eccCCCEEeccccccHHhhhh-hcccccccccccChhhhcC------CcCCcccceecccHHHHHHhhCCCCCCCcC---
Confidence 999999999999999988776 4567999999999999976 468899999999999999999999984320
Q ss_pred HHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCC
Q psy3880 159 MLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKY 238 (408)
Q Consensus 159 ~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~ 238 (408)
.. ..|+ .+++..|+.+..
T Consensus 282 --------------------~~--------------------~~~~----------------------~~Ll~~Iv~~pp 299 (364)
T KOG0581|consen 282 --------------------PP--------------------YLDI----------------------FELLCAIVDEPP 299 (364)
T ss_pred --------------------CC--------------------CCCH----------------------HHHHHHHhcCCC
Confidence 00 1111 123334443322
Q ss_pred -CCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q psy3880 239 -SFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPK 282 (408)
Q Consensus 239 -~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~ 282 (408)
..+.. ..|+++++||.+||++||.+|+|++|+|+|||+...
T Consensus 300 P~lP~~---~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~Hpfi~~~ 341 (364)
T KOG0581|consen 300 PRLPEG---EFSPEFRSFVSCCLRKDPSERPSAKQLLQHPFIKKF 341 (364)
T ss_pred CCCCcc---cCCHHHHHHHHHHhcCCcccCCCHHHHhcCHHHhhc
Confidence 22221 369999999999999999999999999999999764
No 21
>KOG0610|consensus
Probab=100.00 E-value=2.6e-40 Score=318.39 Aligned_cols=244 Identities=30% Similarity=0.497 Sum_probs=183.6
Q ss_pred cccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC-------CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCC
Q psy3880 5 EMVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN-------SNPALRYIMRQLFEALEHVHNHSVVHRDLKPE 75 (408)
Q Consensus 5 ~~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~-------~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~ 75 (408)
.|++|| ++..++. +.+++.+||||||.||+ |....+ ++..+|+|+.+|+.||+|||-.|||+||||||
T Consensus 132 ~~lDHP-FlPTLYa~fet~~~~cl~meyCpGGd--L~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPE 208 (459)
T KOG0610|consen 132 SLLDHP-FLPTLYASFETDKYSCLVMEYCPGGD--LHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPE 208 (459)
T ss_pred HhcCCC-ccchhhheeeccceeEEEEecCCCcc--HHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcc
Confidence 468998 6888887 44566789999999999 766554 44899999999999999999999999999999
Q ss_pred cEEEecCCCEEEeccccchhcccCccccc-----------CCCC--CcccChhhhhhccccCcCCCCcchhhhhhhHHHH
Q psy3880 76 NILLDDQMNVKLTDFGFARVLKKGEKLMD-----------LCGT--PGYLAPEVLRANMFEDATGYGQAVDVWACGVIMY 142 (408)
Q Consensus 76 NILl~~~~~iKl~DFGla~~~~~~~~~~~-----------~~gt--~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~ 142 (408)
|||+.++|+|+|+||.|+......-.+.. .|-+ +....|..+..... ..+.|.
T Consensus 209 NILvredGHIMLsDFDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~------~~k~~~-------- 274 (459)
T KOG0610|consen 209 NILVREDGHIMLSDFDLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKK------RKKKDE-------- 274 (459)
T ss_pred eeEEecCCcEEeeeccccccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccc------cccccc--------
Confidence 99999999999999999865421111100 0000 11112221111000 000000
Q ss_pred HHHhCCCCCCCchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCC
Q psy3880 143 TLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFW 222 (408)
Q Consensus 143 ~ll~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~ 222 (408)
. ....+..+........+..+.++.+|+|||+++++ +.|.++|||++||.+|+||.|..||.
T Consensus 275 ----------~--~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~------GHgsAVDWWtfGIflYEmLyG~TPFK 336 (459)
T KOG0610|consen 275 ----------S--ASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGE------GHGSAVDWWTFGIFLYEMLYGTTPFK 336 (459)
T ss_pred ----------c--ccccchhhhcCCCCccccccccccccccceeeecC------CCCchhhHHHHHHHHHHHHhCCCCcC
Confidence 0 00111122222334556778899999999999874 67889999999999999999999999
Q ss_pred CchhHHHHHHHHhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCC----HHHHHcCCCCCCCCCC
Q psy3880 223 HRKQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYS----VKEALNHSFFHPKLFD 285 (408)
Q Consensus 223 ~~~~~~~~~~i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~t----a~e~L~Hpwf~~~~~~ 285 (408)
+.+..+++.+|+.....|+.. ..+|.+|+|||+++|++||++|+. |.|+.+||||.+..|.
T Consensus 337 G~~~~~Tl~NIv~~~l~Fp~~--~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~HpFF~gVnWa 401 (459)
T KOG0610|consen 337 GSNNKETLRNIVGQPLKFPEE--PEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKRHPFFEGVNWA 401 (459)
T ss_pred CCCchhhHHHHhcCCCcCCCC--CcchhHHHHHHHHHhccChhhhhccccchHHhhcCccccCCChh
Confidence 999999999999999998654 478999999999999999999998 9999999999987654
No 22
>KOG0659|consensus
Probab=100.00 E-value=2.3e-39 Score=296.36 Aligned_cols=226 Identities=25% Similarity=0.409 Sum_probs=178.6
Q ss_pred cccCCcEEEEecc--CCcHHHHHHHHHhhchhhHH---hhhCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEec
Q psy3880 7 VAHSRVVVRVKEE--GDDLKHLAAQVVDKGEAAVQ---DIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDD 81 (408)
Q Consensus 7 ~~~~~~i~~~~~~--~~~~~~lv~e~~~~g~~~l~---~~~~~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl~~ 81 (408)
+.|+| |+.+.+. ..+..+||+||+...-+.+- ..+.+..+++.++.++++||+|||++.|+||||||.|+|++.
T Consensus 58 l~h~n-Ii~LiD~F~~~~~l~lVfEfm~tdLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~ 136 (318)
T KOG0659|consen 58 LKHPN-IIELIDVFPHKSNLSLVFEFMPTDLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISS 136 (318)
T ss_pred ccCcc-hhhhhhhccCCCceEEEEEeccccHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcC
Confidence 35776 5577764 45678999999987632221 123455899999999999999999999999999999999999
Q ss_pred CCCEEEeccccchhcccCcc-cccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHHHH
Q psy3880 82 QMNVKLTDFGFARVLKKGEK-LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVML 160 (408)
Q Consensus 82 ~~~iKl~DFGla~~~~~~~~-~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~~~ 160 (408)
+|.+||+|||+|+.+..... ....+.|.+|+|||++.+ +..|+..+|+||.|||++||+.|.+-|.+.++.+++
T Consensus 137 ~g~lKiADFGLAr~f~~p~~~~~~~V~TRWYRAPELLfG-----sr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL 211 (318)
T KOG0659|consen 137 DGQLKIADFGLARFFGSPNRIQTHQVVTRWYRAPELLFG-----SRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQL 211 (318)
T ss_pred CCcEEeecccchhccCCCCcccccceeeeeccChHHhcc-----chhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHH
Confidence 99999999999998875433 334578999999999986 468999999999999999999999999999999999
Q ss_pred HHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCCCC
Q psy3880 161 RNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240 (408)
Q Consensus 161 ~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~~f 240 (408)
..|...-.++....|.+.....+--.++ ..|- ..
T Consensus 212 ~~If~~LGTP~~~~WP~~~~lpdY~~~~-----------------------------~~P~-----------------~~ 245 (318)
T KOG0659|consen 212 SKIFRALGTPTPDQWPEMTSLPDYVKIQ-----------------------------QFPK-----------------PP 245 (318)
T ss_pred HHHHHHcCCCCcccCccccccccHHHHh-----------------------------cCCC-----------------Cc
Confidence 9999888888777776655432211111 0000 00
Q ss_pred CCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCCCC
Q psy3880 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLF 284 (408)
Q Consensus 241 ~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~~~ 284 (408)
....+...|+++.||+.+||.+||.+|+||.|+|+|+||.....
T Consensus 246 ~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~~P~ 289 (318)
T KOG0659|consen 246 LNNLFPAASSDALDLLSKMLTYNPKKRITASQALKHPYFKSLPL 289 (318)
T ss_pred cccccccccHHHHHHHHhhhccCchhcccHHHHhcchhhhcCCC
Confidence 01124567999999999999999999999999999999986543
No 23
>KOG4717|consensus
Probab=100.00 E-value=9.5e-40 Score=320.51 Aligned_cols=196 Identities=36% Similarity=0.605 Sum_probs=175.9
Q ss_pred ccccCCcEEEEeccCC--cHHHHHHHHHhhchhhHHhhhCCH------HHHHHHHHHHHHHHHHHHHCCCeeccCCCCcE
Q psy3880 6 MVAHSRVVVRVKEEGD--DLKHLAAQVVDKGEAAVQDIINSN------PALRYIMRQLFEALEHVHNHSVVHRDLKPENI 77 (408)
Q Consensus 6 ~~~~~~~i~~~~~~~~--~~~~lv~e~~~~g~~~l~~~~~~~------~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NI 77 (408)
+|-|+| ||++++..| ...|||+|+=++|+ |+|+|... ..++.|+.||+.|+.|||+..+|||||||||+
T Consensus 73 LVQHpN-iVRLYEViDTQTKlyLiLELGD~GD--l~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENV 149 (864)
T KOG4717|consen 73 LVQHPN-IVRLYEVIDTQTKLYLILELGDGGD--LFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENV 149 (864)
T ss_pred HhcCcC-eeeeeehhcccceEEEEEEecCCch--HHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCccee
Confidence 477887 669998544 56799999999999 99999754 67899999999999999999999999999998
Q ss_pred EEe-cCCCEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchh
Q psy3880 78 LLD-DQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQ 156 (408)
Q Consensus 78 Ll~-~~~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~ 156 (408)
.+- .-|-+||+||||+-.+.+++.+.+.||+..|-|||++.+..+ +
T Consensus 150 VFFEKlGlVKLTDFGFSNkf~PG~kL~TsCGSLAYSAPEILLGDsY------D--------------------------- 196 (864)
T KOG4717|consen 150 VFFEKLGLVKLTDFGFSNKFQPGKKLTTSCGSLAYSAPEILLGDSY------D--------------------------- 196 (864)
T ss_pred EEeeecCceEeeeccccccCCCcchhhcccchhhccCchhhhcCcc------C---------------------------
Confidence 774 568999999999999999999999999999999999986422 1
Q ss_pred HHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhc
Q psy3880 157 MVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEG 236 (408)
Q Consensus 157 ~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~ 236 (408)
.+++||||+|||+|.|+||.+||...+..+++..|+.+
T Consensus 197 ------------------------------------------APAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDC 234 (864)
T KOG4717|consen 197 ------------------------------------------APAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDC 234 (864)
T ss_pred ------------------------------------------CcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhcc
Confidence 13789999999999999999999999999999999999
Q ss_pred CCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCCC
Q psy3880 237 KYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKL 283 (408)
Q Consensus 237 ~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~~ 283 (408)
+|..++ .+|.+|+|||..||+.||.+|.|.+|+.+|+|++...
T Consensus 235 KYtvPs----hvS~eCrdLI~sMLvRdPkkRAslEeI~s~~Wlq~~D 277 (864)
T KOG4717|consen 235 KYTVPS----HVSKECRDLIQSMLVRDPKKRASLEEIVSTSWLQAGD 277 (864)
T ss_pred cccCch----hhhHHHHHHHHHHHhcCchhhccHHHHhccccccCCC
Confidence 999875 6899999999999999999999999999999998753
No 24
>KOG0594|consensus
Probab=100.00 E-value=3.9e-39 Score=306.75 Aligned_cols=228 Identities=29% Similarity=0.415 Sum_probs=178.0
Q ss_pred ccccCCcEEEEeccCC--c------HHHHHHHHHhhchhhHHhhhC------CHHHHHHHHHHHHHHHHHHHHCCCeecc
Q psy3880 6 MVAHSRVVVRVKEEGD--D------LKHLAAQVVDKGEAAVQDIIN------SNPALRYIMRQLFEALEHVHNHSVVHRD 71 (408)
Q Consensus 6 ~~~~~~~i~~~~~~~~--~------~~~lv~e~~~~g~~~l~~~~~------~~~~~r~i~~qil~aL~~LH~~~IvHRD 71 (408)
.|.|+|.||++.+... + ..|+||||++..-...-|.+. +...++.+|+||+.||+|||+++|+|||
T Consensus 66 ~L~~~~~iv~L~dv~~~~~~~~~~~~l~lvfe~~d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRD 145 (323)
T KOG0594|consen 66 RLSHANHIVRLHDVIHTSNNHRGIGKLYLVFEFLDRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRD 145 (323)
T ss_pred HhCCCcceEEEEeeeeecccccccceEEEEEEeecccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccc
Confidence 4788886777776322 2 567899998766322333322 1247999999999999999999999999
Q ss_pred CCCCcEEEecCCCEEEeccccchhcc-cCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCC
Q psy3880 72 LKPENILLDDQMNVKLTDFGFARVLK-KGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPP 150 (408)
Q Consensus 72 LKp~NILl~~~~~iKl~DFGla~~~~-~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~p 150 (408)
|||+|||++++|.+||+|||+|+... +.......++|.+|+|||++.+. ..|+..+||||+|||++||+++++.
T Consensus 146 LKPQNlLi~~~G~lKlaDFGlAra~~ip~~~yt~evvTlWYRaPEvLlGs-----~~Ys~~vDiWs~GcIfaEm~~~~~L 220 (323)
T KOG0594|consen 146 LKPQNLLISSSGVLKLADFGLARAFSIPMRTYTPEVVTLWYRAPEVLLGS-----TSYSTSVDIWSLGCIFAEMFTRRPL 220 (323)
T ss_pred CCcceEEECCCCcEeeeccchHHHhcCCcccccccEEEeeccCHHHhcCC-----CcCCCCcchHhHHHHHHHHHhCCCC
Confidence 99999999999999999999999877 44456678899999999999874 5699999999999999999999999
Q ss_pred CCCchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHH
Q psy3880 151 FWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVML 230 (408)
Q Consensus 151 f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~ 230 (408)
|.+.++.+++..|.+--.++....|+..... ...+++|........+
T Consensus 221 FpG~se~~ql~~If~~lGtP~e~~Wp~v~~~---------------------------------~~~k~~f~~~~~~~~l 267 (323)
T KOG0594|consen 221 FPGDSEIDQLFRIFRLLGTPNEKDWPGVSSL---------------------------------PDYKAPFPKWPGPKDL 267 (323)
T ss_pred CCCCcHHHHHHHHHHHcCCCCccCCCCcccc---------------------------------ccccccCcCCCCccch
Confidence 9999999999999887777777667654321 1112233222111111
Q ss_pred HHHHhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q psy3880 231 RNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPK 282 (408)
Q Consensus 231 ~~i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~ 282 (408)
...++..++++.||+.+||++||.+|+||+.+|.||||...
T Consensus 268 -----------~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~ 308 (323)
T KOG0594|consen 268 -----------SSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSEL 308 (323)
T ss_pred -----------HHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhccc
Confidence 11234567899999999999999999999999999999875
No 25
>KOG0585|consensus
Probab=100.00 E-value=2e-39 Score=316.42 Aligned_cols=200 Identities=32% Similarity=0.532 Sum_probs=166.1
Q ss_pred ccccCCcEEEEecc----CCcHHHHHHHHHhhchhhHHhh----h-CCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCc
Q psy3880 6 MVAHSRVVVRVKEE----GDDLKHLAAQVVDKGEAAVQDI----I-NSNPALRYIMRQLFEALEHVHNHSVVHRDLKPEN 76 (408)
Q Consensus 6 ~~~~~~~i~~~~~~----~~~~~~lv~e~~~~g~~~l~~~----~-~~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~N 76 (408)
-+.|+| ||++.|- ..+..|||+|||.+|+ +... - .++.++|.|++.++.||+|||.+|||||||||+|
T Consensus 164 kl~H~n-VV~LiEvLDDP~s~~~YlVley~s~G~--v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsN 240 (576)
T KOG0585|consen 164 KLHHPN-VVKLIEVLDDPESDKLYLVLEYCSKGE--VKWCPPDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSN 240 (576)
T ss_pred hcCCcC-eeEEEEeecCcccCceEEEEEeccCCc--cccCCCCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhh
Confidence 367876 6677764 3456799999999998 4322 1 3558999999999999999999999999999999
Q ss_pred EEEecCCCEEEeccccchhcc------cCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCC
Q psy3880 77 ILLDDQMNVKLTDFGFARVLK------KGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPP 150 (408)
Q Consensus 77 ILl~~~~~iKl~DFGla~~~~------~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~p 150 (408)
+|++++|.+||+|||.+.... ....+...+|||.|+|||.+....- .
T Consensus 241 LLl~~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~---~------------------------ 293 (576)
T KOG0585|consen 241 LLLSSDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNS---F------------------------ 293 (576)
T ss_pred eEEcCCCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCC---c------------------------
Confidence 999999999999999987652 2223455789999999999864210 0
Q ss_pred CCCchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHH
Q psy3880 151 FWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVML 230 (408)
Q Consensus 151 f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~ 230 (408)
...|.+.||||+||.+|.|+.|..||.+....+++
T Consensus 294 ---------------------------------------------~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l~ 328 (576)
T KOG0585|consen 294 ---------------------------------------------SYSGFALDIWALGVTLYCLLFGQLPFFDDFELELF 328 (576)
T ss_pred ---------------------------------------------cccchhhhhhhhhhhHHHhhhccCCcccchHHHHH
Confidence 01244789999999999999999999999999999
Q ss_pred HHHHhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q psy3880 231 RNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPK 282 (408)
Q Consensus 231 ~~i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~ 282 (408)
.+|++....|+. ..+++++++|||.+||.+||++|+|+.++..|||....
T Consensus 329 ~KIvn~pL~fP~--~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~ 378 (576)
T KOG0585|consen 329 DKIVNDPLEFPE--NPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRD 378 (576)
T ss_pred HHHhcCcccCCC--cccccHHHHHHHHHHhhcChhheeehhhheecceeccC
Confidence 999999988865 45789999999999999999999999999999999865
No 26
>KOG0578|consensus
Probab=100.00 E-value=2.6e-39 Score=322.26 Aligned_cols=197 Identities=30% Similarity=0.570 Sum_probs=163.7
Q ss_pred cccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEe
Q psy3880 7 VAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLD 80 (408)
Q Consensus 7 ~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl~ 80 (408)
+.|+|+| .+.+ -..+....||||++||. |.|.+. ++.+++.|++++|.||+|||.+||+|||||.+|||++
T Consensus 327 ~~H~NiV-nfl~Sylv~deLWVVMEym~ggs--LTDvVt~~~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~ 403 (550)
T KOG0578|consen 327 LHHPNIV-NFLDSYLVGDELWVVMEYMEGGS--LTDVVTKTRMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLT 403 (550)
T ss_pred ccchHHH-HHHHHhcccceeEEEEeecCCCc--hhhhhhcccccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEec
Confidence 3577644 5554 23467889999999999 888764 4689999999999999999999999999999999999
Q ss_pred cCCCEEEeccccchhcccCc-ccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHHH
Q psy3880 81 DQMNVKLTDFGFARVLKKGE-KLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVM 159 (408)
Q Consensus 81 ~~~~iKl~DFGla~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~~ 159 (408)
.+|.+||+|||||..+.... .-.+.+|||+|||||++.. ..|+.++||||||++++||+.|.+||..++....
T Consensus 404 ~~g~vKltDFGFcaqi~~~~~KR~TmVGTPYWMAPEVvtr------k~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrA 477 (550)
T KOG0578|consen 404 MDGSVKLTDFGFCAQISEEQSKRSTMVGTPYWMAPEVVTR------KPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA 477 (550)
T ss_pred cCCcEEEeeeeeeeccccccCccccccCCCCccchhhhhh------cccCccccchhhhhHHHHHhcCCCCccCCChHHH
Confidence 99999999999998877554 4567899999999999975 4689999999999999999999999987766655
Q ss_pred HHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCCC
Q psy3880 160 LRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYS 239 (408)
Q Consensus 160 ~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~~ 239 (408)
+..|... |.|+
T Consensus 478 lyLIa~n--------------------------------------------------g~P~------------------- 488 (550)
T KOG0578|consen 478 LYLIATN--------------------------------------------------GTPK------------------- 488 (550)
T ss_pred HHHHhhc--------------------------------------------------CCCC-------------------
Confidence 5544321 2222
Q ss_pred CCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCCC
Q psy3880 240 FSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKL 283 (408)
Q Consensus 240 f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~~ 283 (408)
+ ..+..+|++++|||.+||++|+.+|+||.|+|+||||+...
T Consensus 489 l--k~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~HpFl~~a~ 530 (550)
T KOG0578|consen 489 L--KNPEKLSPELKDFLDRCLVVDVEQRASAKELLEHPFLKMAK 530 (550)
T ss_pred c--CCccccCHHHHHHHHHHhhcchhcCCCHHHHhcChhhhhcC
Confidence 1 22457999999999999999999999999999999996543
No 27
>KOG0611|consensus
Probab=100.00 E-value=3.7e-39 Score=308.98 Aligned_cols=193 Identities=34% Similarity=0.628 Sum_probs=170.7
Q ss_pred cccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC-----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcE
Q psy3880 5 EMVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN-----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENI 77 (408)
Q Consensus 5 ~~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~-----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NI 77 (408)
+.|.||++| .+++ |..|...|||||..||| |+|+|. ++.++|.+++||+.|+.|||+++++|||||.+||
T Consensus 108 SsLNHPhII-~IyEVFENkdKIvivMEYaS~Ge--LYDYiSer~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENI 184 (668)
T KOG0611|consen 108 SSLNHPHII-QIYEVFENKDKIVIVMEYASGGE--LYDYISERGSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENI 184 (668)
T ss_pred hhcCCCcee-ehhhhhcCCceEEEEEEecCCcc--HHHHHHHhccccHHHHHHHHHHHHHHHHHHhhccceecccchhhe
Confidence 468999866 6766 66678899999999999 999985 4589999999999999999999999999999999
Q ss_pred EEecCCCEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhH
Q psy3880 78 LLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 157 (408)
Q Consensus 78 Ll~~~~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~ 157 (408)
|++.++++||+|||++-.+..+.-+.++||+|.|.+||++.+..+
T Consensus 185 LLD~N~NiKIADFGLSNly~~~kfLqTFCGSPLYASPEIvNG~PY----------------------------------- 229 (668)
T KOG0611|consen 185 LLDQNNNIKIADFGLSNLYADKKFLQTFCGSPLYASPEIVNGTPY----------------------------------- 229 (668)
T ss_pred eecCCCCeeeeccchhhhhccccHHHHhcCCcccCCccccCCCCC-----------------------------------
Confidence 999999999999999999988888899999999999999865321
Q ss_pred HHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcC
Q psy3880 158 VMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 237 (408)
Q Consensus 158 ~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~ 237 (408)
-|+++|.||+||++|+|+.|..||.+++...++++|..|.
T Consensus 230 ----------------------------------------~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~Ga 269 (668)
T KOG0611|consen 230 ----------------------------------------KGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRGA 269 (668)
T ss_pred ----------------------------------------CCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhccc
Confidence 1447888888999999999999998888888999999988
Q ss_pred CCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCC
Q psy3880 238 YSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFH 280 (408)
Q Consensus 238 ~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~ 280 (408)
|.-+ ..+.+|.-||+.||.+||++|.|++++-+|=|.+
T Consensus 270 YrEP-----~~PSdA~gLIRwmLmVNP~RRATieDiAsHWWvN 307 (668)
T KOG0611|consen 270 YREP-----ETPSDASGLIRWMLMVNPERRATIEDIASHWWVN 307 (668)
T ss_pred ccCC-----CCCchHHHHHHHHHhcCcccchhHHHHhhhheee
Confidence 7643 3477899999999999999999999999998885
No 28
>KOG0658|consensus
Probab=100.00 E-value=1.5e-38 Score=302.93 Aligned_cols=225 Identities=29% Similarity=0.444 Sum_probs=169.9
Q ss_pred ccccCCcEEEEec-----cC-CcHHHHHHHHHhhchhhHHhhhC---------CHHHHHHHHHHHHHHHHHHHHCCCeec
Q psy3880 6 MVAHSRVVVRVKE-----EG-DDLKHLAAQVVDKGEAAVQDIIN---------SNPALRYIMRQLFEALEHVHNHSVVHR 70 (408)
Q Consensus 6 ~~~~~~~i~~~~~-----~~-~~~~~lv~e~~~~g~~~l~~~~~---------~~~~~r~i~~qil~aL~~LH~~~IvHR 70 (408)
+++|+|+|.-++. +. ..+..|||||+... |.+.+. ..-+++.|++||++||.|||+.||+||
T Consensus 73 ~l~HpNIV~L~~~f~~~~~~d~~~lnlVleymP~t---L~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHR 149 (364)
T KOG0658|consen 73 KLDHPNIVRLLYFFSSSTESDEVYLNLVLEYMPET---LYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHR 149 (364)
T ss_pred hcCCcCeeeEEEEEEecCCCchhHHHHHHHhchHH---HHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccC
Confidence 7899996633332 22 12567999999865 455443 115789999999999999999999999
Q ss_pred cCCCCcEEEecC-CCEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCC
Q psy3880 71 DLKPENILLDDQ-MNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCP 149 (408)
Q Consensus 71 DLKp~NILl~~~-~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~ 149 (408)
||||.|+|+|.+ |.+||||||.|+.+..++...++..|++|+|||.+.+ +..|+.++||||.||++.||+-|++
T Consensus 150 DIKPqNlLvD~~tg~LKicDFGSAK~L~~~epniSYicSRyYRaPELifg-----a~~Yt~~IDiWSaGCV~aELl~g~p 224 (364)
T KOG0658|consen 150 DIKPQNLLVDPDTGVLKICDFGSAKVLVKGEPNISYICSRYYRAPELIFG-----ATEYTTSIDIWSAGCVMAELLKGQP 224 (364)
T ss_pred CCChheEEEcCCCCeEEeccCCcceeeccCCCceeEEEeccccCHHHHcC-----ccccCceeEEhhhhHHHHHHhcCCc
Confidence 999999999965 8999999999999999888888999999999999986 5789999999999999999999999
Q ss_pred CCCCchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHH
Q psy3880 150 PFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVM 229 (408)
Q Consensus 150 pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~ 229 (408)
.|.|.+..+++..|..--..++..+ + ..|.|+-. ...|
T Consensus 225 lFpG~s~~dQL~eIik~lG~Pt~e~---I-~~mn~~y~------------------------------~~~~-------- 262 (364)
T KOG0658|consen 225 LFPGDSSVDQLVEIIKVLGTPTRED---I-KSMNPNYT------------------------------EFKF-------- 262 (364)
T ss_pred ccCCCCHHHHHHHHHHHhCCCCHHH---H-hhcCcccc------------------------------cccC--------
Confidence 9999998888888876432221110 0 00010000 0000
Q ss_pred HHHHHhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCCC
Q psy3880 230 LRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKL 283 (408)
Q Consensus 230 ~~~i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~~ 283 (408)
.+|....+ ..-....+++++.||+.++|+++|.+|.|+.|+|.||||+...
T Consensus 263 -p~ik~~~~--~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdelr 313 (364)
T KOG0658|consen 263 -PQIKAHPW--HKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDELR 313 (364)
T ss_pred -cccccccc--eeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHhh
Confidence 01111110 0011246899999999999999999999999999999997643
No 29
>KOG0694|consensus
Probab=100.00 E-value=1.7e-38 Score=322.16 Aligned_cols=193 Identities=30% Similarity=0.568 Sum_probs=159.8
Q ss_pred CCcEEEEeccCC--cHHHHHHHHHhhchhhHHhhhC----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEecCC
Q psy3880 10 SRVVVRVKEEGD--DLKHLAAQVVDKGEAAVQDIIN----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQM 83 (408)
Q Consensus 10 ~~~i~~~~~~~~--~~~~lv~e~~~~g~~~l~~~~~----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl~~~~ 83 (408)
+++++.+....+ +..|+||||+.||+ +..++. +++.+++|+..|+.||+|||++||||||||.+|||+|.+|
T Consensus 428 HPFL~~L~~~fQT~~~l~fvmey~~Ggd--m~~~~~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eG 505 (694)
T KOG0694|consen 428 HPFLVNLFSCFQTKEHLFFVMEYVAGGD--LMHHIHTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEG 505 (694)
T ss_pred CCeEeecccccccCCeEEEEEEecCCCc--EEEEEecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccC
Confidence 458889998655 56789999999999 766654 5689999999999999999999999999999999999999
Q ss_pred CEEEeccccchhcc-cCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHHHHHH
Q psy3880 84 NVKLTDFGFARVLK-KGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRN 162 (408)
Q Consensus 84 ~iKl~DFGla~~~~-~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~~~~~ 162 (408)
.+||+|||+|+..- .+....+.||||.|+|||++.+. .|
T Consensus 506 h~kiADFGlcKe~m~~g~~TsTfCGTpey~aPEil~e~------~Y---------------------------------- 545 (694)
T KOG0694|consen 506 HVKIADFGLCKEGMGQGDRTSTFCGTPEFLAPEVLTEQ------SY---------------------------------- 545 (694)
T ss_pred cEEecccccccccCCCCCccccccCChhhcChhhhccC------cc----------------------------------
Confidence 99999999998654 55566789999999999999752 34
Q ss_pred HHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCCCCCC
Q psy3880 163 IMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSS 242 (408)
Q Consensus 163 i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~~f~~ 242 (408)
+..+|+||+||+||+||.|.+||.+++..+.+..|+...+.++.
T Consensus 546 ------------------------------------t~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d~~~yP~ 589 (694)
T KOG0694|consen 546 ------------------------------------TRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVNDEVRYPR 589 (694)
T ss_pred ------------------------------------cchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCCCCCC
Confidence 44566666666666666666666666777777788877777653
Q ss_pred CcCCCCCccHHHHHHHhcccCCCCCCC-----HHHHHcCCCCCCCCC
Q psy3880 243 PEWNDISEDPKDLIRKLLIVTPEDRYS-----VKEALNHSFFHPKLF 284 (408)
Q Consensus 243 ~~~~~iS~~~~dLI~klL~~dP~~R~t-----a~e~L~Hpwf~~~~~ 284 (408)
.+|.|+.+++++||.+||++|+. ++++..||||....+
T Consensus 590 ----~ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~hpFFr~i~w 632 (694)
T KOG0694|consen 590 ----FLSKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKHPFFRSIDW 632 (694)
T ss_pred ----cccHHHHHHHHHHhccCcccccCCCCCCchhhhhCCccccCCH
Confidence 58999999999999999999996 689999999987544
No 30
>KOG0198|consensus
Probab=100.00 E-value=8.1e-38 Score=301.44 Aligned_cols=197 Identities=31% Similarity=0.549 Sum_probs=151.5
Q ss_pred cccCCcEEEEecc--CC-c-HHHHHHHHHhhchhhHHhhhC------CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCc
Q psy3880 7 VAHSRVVVRVKEE--GD-D-LKHLAAQVVDKGEAAVQDIIN------SNPALRYIMRQLFEALEHVHNHSVVHRDLKPEN 76 (408)
Q Consensus 7 ~~~~~~i~~~~~~--~~-~-~~~lv~e~~~~g~~~l~~~~~------~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~N 76 (408)
|.|+| ||+.+.. .. + ..++.|||+.||. |.+.+. +++.++.+.+||++||+|||++|||||||||+|
T Consensus 71 l~~p~-IV~~~G~~~~~~~~~~~i~mEy~~~Gs--L~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~N 147 (313)
T KOG0198|consen 71 LNHPN-IVQYYGSSSSRENDEYNIFMEYAPGGS--LSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPAN 147 (313)
T ss_pred CCCCC-EEeeCCccccccCeeeEeeeeccCCCc--HHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccce
Confidence 55787 5566652 22 2 4789999999999 877653 568999999999999999999999999999999
Q ss_pred EEEec-CCCEEEeccccchhccc----CcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCC
Q psy3880 77 ILLDD-QMNVKLTDFGFARVLKK----GEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151 (408)
Q Consensus 77 ILl~~-~~~iKl~DFGla~~~~~----~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf 151 (408)
||++. ++.+||+|||++..... ........|||.|||||++... ...+.++||||+||++.||+||++||
T Consensus 148 iLl~~~~~~~KlaDFG~a~~~~~~~~~~~~~~~~~Gtp~~maPEvi~~g-----~~~~~~sDiWSlGCtVvEM~Tg~~PW 222 (313)
T KOG0198|consen 148 ILLDPSNGDVKLADFGLAKKLESKGTKSDSELSVQGTPNYMAPEVIRNG-----EVARRESDIWSLGCTVVEMLTGKPPW 222 (313)
T ss_pred EEEeCCCCeEEeccCccccccccccccccccccccCCccccCchhhcCC-----CcCCccchhhhcCCEEEeccCCCCcc
Confidence 99999 79999999999987663 1223457899999999999731 11235999999999999999999998
Q ss_pred CCc-hhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHH
Q psy3880 152 WHR-KQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVML 230 (408)
Q Consensus 152 ~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~ 230 (408)
... .....+..|
T Consensus 223 ~~~~~~~~~~~~i------------------------------------------------------------------- 235 (313)
T KOG0198|consen 223 SEFFEEAEALLLI------------------------------------------------------------------- 235 (313)
T ss_pred hhhcchHHHHHHH-------------------------------------------------------------------
Confidence 652 111111111
Q ss_pred HHHHhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCCC
Q psy3880 231 RNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKL 283 (408)
Q Consensus 231 ~~i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~~ 283 (408)
........-| ..+|++++|||.+||.+||++||||+++|+|||.....
T Consensus 236 ---g~~~~~P~ip--~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~~ 283 (313)
T KOG0198|consen 236 ---GREDSLPEIP--DSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQNS 283 (313)
T ss_pred ---hccCCCCCCC--cccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhccc
Confidence 1111000111 34899999999999999999999999999999997653
No 31
>KOG0591|consensus
Probab=100.00 E-value=2.4e-37 Score=284.97 Aligned_cols=154 Identities=30% Similarity=0.608 Sum_probs=132.4
Q ss_pred ccccCCcEEEEec-c---CCcHHHHHHHHHhhchhhHHhhhC---------CHHHHHHHHHHHHHHHHHHHH--CC--Ce
Q psy3880 6 MVAHSRVVVRVKE-E---GDDLKHLAAQVVDKGEAAVQDIIN---------SNPALRYIMRQLFEALEHVHN--HS--VV 68 (408)
Q Consensus 6 ~~~~~~~i~~~~~-~---~~~~~~lv~e~~~~g~~~l~~~~~---------~~~~~r~i~~qil~aL~~LH~--~~--Iv 68 (408)
+|.|+|+| +++. . +..-.+||||||.+|+ |...|. .++++..++.|++.||.+||+ .+ |+
T Consensus 74 QL~HpNIV-qYy~~~f~~~~evlnivmE~c~~GD--LsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~Vm 150 (375)
T KOG0591|consen 74 QLNHPNIV-QYYAHSFIEDNEVLNIVMELCDAGD--LSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVM 150 (375)
T ss_pred hcCCchHH-HHHHHhhhccchhhHHHHHhhcccC--HHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhcccccccee
Confidence 68999966 5554 2 2233799999999999 776653 458999999999999999999 55 99
Q ss_pred eccCCCCcEEEecCCCEEEeccccchhcccCccc-ccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhC
Q psy3880 69 HRDLKPENILLDDQMNVKLTDFGFARVLKKGEKL-MDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVG 147 (408)
Q Consensus 69 HRDLKp~NILl~~~~~iKl~DFGla~~~~~~~~~-~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G 147 (408)
||||||.||+++.+|.+||+|||+++.+...... .+++|||+||+||.+.. .+|+.++||||+||++|||..-
T Consensus 151 HRDIKPaNIFl~~~gvvKLGDfGL~r~l~s~~tfA~S~VGTPyYMSPE~i~~------~~Y~~kSDiWslGCllyEMcaL 224 (375)
T KOG0591|consen 151 HRDIKPANIFLTANGVVKLGDFGLGRFLSSKTTFAHSLVGTPYYMSPERIHE------SGYNFKSDIWSLGCLLYEMCAL 224 (375)
T ss_pred eccCcchheEEcCCCceeeccchhHhHhcchhHHHHhhcCCCcccCHHHHhc------CCCCcchhHHHHHHHHHHHHhc
Confidence 9999999999999999999999999998876544 35899999999999986 5799999999999999999999
Q ss_pred CCCCCCchhHHHHHHHHhccc
Q psy3880 148 CPPFWHRKQMVMLRNIMEGKY 168 (408)
Q Consensus 148 ~~pf~~~~~~~~~~~i~~~~~ 168 (408)
++||.+.+-.++.++|.+|.+
T Consensus 225 ~~PF~g~n~~~L~~KI~qgd~ 245 (375)
T KOG0591|consen 225 QSPFYGDNLLSLCKKIEQGDY 245 (375)
T ss_pred CCCcccccHHHHHHHHHcCCC
Confidence 999999888888888877644
No 32
>KOG0582|consensus
Probab=100.00 E-value=1.2e-36 Score=295.33 Aligned_cols=206 Identities=28% Similarity=0.499 Sum_probs=164.6
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC-------CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCc
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN-------SNPALRYIMRQLFEALEHVHNHSVVHRDLKPEN 76 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~-------~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~N 76 (408)
...||| |+.+.. ..+...++||.||.+|. +++++. ++..++.+++++|+||.|||.+|.||||||+.|
T Consensus 80 l~~HPN-Iv~~~~sFvv~~~LWvVmpfMa~GS--~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgn 156 (516)
T KOG0582|consen 80 LIDHPN-IVTYHCSFVVDSELWVVMPFMAGGS--LLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGN 156 (516)
T ss_pred hcCCCC-cceEEEEEEecceeEEeehhhcCCc--HHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceeccccccc
Confidence 467887 446665 45677899999999999 888874 458899999999999999999999999999999
Q ss_pred EEEecCCCEEEeccccchhcccCc-----ccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCC
Q psy3880 77 ILLDDQMNVKLTDFGFARVLKKGE-----KLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151 (408)
Q Consensus 77 ILl~~~~~iKl~DFGla~~~~~~~-----~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf 151 (408)
||++++|.|||+|||++..+..+. .+.+.+|||+|||||++..+ ..+|+.|+||||||++..||.+|..||
T Consensus 157 ILi~~dG~VkLadFgvsa~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~----~~GYdfKaDIwSfGITA~ELA~G~aPf 232 (516)
T KOG0582|consen 157 ILIDSDGTVKLADFGVSASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQ----LHGYDFKADIWSFGITACELAHGHAPF 232 (516)
T ss_pred EEEcCCCcEEEcCceeeeeecccCceeeEeeccccCcccccChHHhhhc----ccCccchhhhhhhhHHHHHHhcCCCCc
Confidence 999999999999999876654322 12457899999999998664 578999999999999999999999999
Q ss_pred CCchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHH
Q psy3880 152 WHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLR 231 (408)
Q Consensus 152 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~ 231 (408)
.......++..-+++ .||+....
T Consensus 233 ~k~pPmkvLl~tLqn---------------------------------------------------~pp~~~t~------ 255 (516)
T KOG0582|consen 233 SKYPPMKVLLLTLQN---------------------------------------------------DPPTLLTS------ 255 (516)
T ss_pred ccCChHHHHHHHhcC---------------------------------------------------CCCCcccc------
Confidence 877666655544443 33321100
Q ss_pred HHHhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q psy3880 232 NIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPK 282 (408)
Q Consensus 232 ~i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~ 282 (408)
.++..+....+...+.+|..||++||.+||||+++|+|+||+..
T Consensus 256 -------~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FFk~~ 299 (516)
T KOG0582|consen 256 -------GLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKHAFFKKA 299 (516)
T ss_pred -------cCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHHhhc
Confidence 01111223456689999999999999999999999999999864
No 33
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=1e-36 Score=298.82 Aligned_cols=194 Identities=33% Similarity=0.581 Sum_probs=148.3
Q ss_pred ccccCCcEEEEe--ccCCcHHHHHHHHHhhchhhHHhhhC-----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEE
Q psy3880 6 MVAHSRVVVRVK--EEGDDLKHLAAQVVDKGEAAVQDIIN-----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENIL 78 (408)
Q Consensus 6 ~~~~~~~i~~~~--~~~~~~~~lv~e~~~~g~~~l~~~~~-----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NIL 78 (408)
.+.|++++ .+. .+.++..|+||||+.||. |.+.+. ++..++.++.||+.||+|||++||+||||||+|||
T Consensus 51 ~l~hp~i~-~~~~~~~~~~~~~lv~e~~~~~~--L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIl 127 (323)
T cd05571 51 NTRHPFLT-ALKYSFQTHDRLCFVMEYANGGE--LFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLM 127 (323)
T ss_pred hCCCCCCC-CEEEEEEcCCEEEEEEeCCCCCc--HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEE
Confidence 35788755 443 355667899999999998 777653 45789999999999999999999999999999999
Q ss_pred EecCCCEEEeccccchhcc-cCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhH
Q psy3880 79 LDDQMNVKLTDFGFARVLK-KGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 157 (408)
Q Consensus 79 l~~~~~iKl~DFGla~~~~-~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~ 157 (408)
++.++.+||+|||+++... ........+||+.|+|||++.. ..|+.++|+||+||++|+|++|..||
T Consensus 128 l~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwSlG~il~elltg~~Pf------ 195 (323)
T cd05571 128 LDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLED------NDYGRAVDWWGLGVVMYEMMCGRLPF------ 195 (323)
T ss_pred ECCCCCEEEeeCCCCcccccCCCcccceecCccccChhhhcC------CCCCccccCcccchhhhhhhcCCCCC------
Confidence 9999999999999987532 2233345789999999999853 23455555555555555555555555
Q ss_pred HHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcC
Q psy3880 158 VMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 237 (408)
Q Consensus 158 ~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~ 237 (408)
...+...+...+..+.
T Consensus 196 ----------------------------------------------------------------~~~~~~~~~~~~~~~~ 211 (323)
T cd05571 196 ----------------------------------------------------------------YNQDHEKLFELILMEE 211 (323)
T ss_pred ----------------------------------------------------------------CCCCHHHHHHHHHcCC
Confidence 4433344444454444
Q ss_pred CCCCCCcCCCCCccHHHHHHHhcccCCCCCC-----CHHHHHcCCCCCCC
Q psy3880 238 YSFSSPEWNDISEDPKDLIRKLLIVTPEDRY-----SVKEALNHSFFHPK 282 (408)
Q Consensus 238 ~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~-----ta~e~L~Hpwf~~~ 282 (408)
..++ ..+++++++||++||+.||++|| ++.++++||||...
T Consensus 212 ~~~p----~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h~~f~~~ 257 (323)
T cd05571 212 IRFP----RTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHRFFASI 257 (323)
T ss_pred CCCC----CCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence 4443 35799999999999999999999 89999999999764
No 34
>KOG0612|consensus
Probab=100.00 E-value=6.2e-37 Score=323.29 Aligned_cols=202 Identities=32% Similarity=0.538 Sum_probs=169.4
Q ss_pred cCCcEEEEeccC--CcHHHHHHHHHhhchhhHHhhh-----CCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEec
Q psy3880 9 HSRVVVRVKEEG--DDLKHLAAQVVDKGEAAVQDII-----NSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDD 81 (408)
Q Consensus 9 ~~~~i~~~~~~~--~~~~~lv~e~~~~g~~~l~~~~-----~~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl~~ 81 (408)
-+.||+.+.+.+ ++..|+||||+.||+ |...+ .+++-+|+|+..|+.||.-||+.|+|||||||+|||++.
T Consensus 133 ns~Wiv~LhyAFQD~~~LYlVMdY~pGGD--lltLlSk~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~ 210 (1317)
T KOG0612|consen 133 NSEWIVQLHYAFQDERYLYLVMDYMPGGD--LLTLLSKFDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDK 210 (1317)
T ss_pred CcHHHHHHHHHhcCccceEEEEecccCch--HHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecc
Confidence 367888877654 456789999999999 65544 456899999999999999999999999999999999999
Q ss_pred CCCEEEeccccchhcccCccc--ccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHHH
Q psy3880 82 QMNVKLTDFGFARVLKKGEKL--MDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVM 159 (408)
Q Consensus 82 ~~~iKl~DFGla~~~~~~~~~--~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~~ 159 (408)
.|+|||+|||.|-.+..+... ...+|||-|.+||++....- +
T Consensus 211 ~GHikLADFGsClkm~~dG~V~s~~aVGTPDYISPEvLqs~~~------~------------------------------ 254 (1317)
T KOG0612|consen 211 SGHIKLADFGSCLKMDADGTVRSSVAVGTPDYISPEVLQSQGD------G------------------------------ 254 (1317)
T ss_pred cCcEeeccchhHHhcCCCCcEEeccccCCCCccCHHHHHhhcC------C------------------------------
Confidence 999999999999888744333 34789999999999975310 0
Q ss_pred HHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCCC
Q psy3880 160 LRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYS 239 (408)
Q Consensus 160 ~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~~ 239 (408)
...||..||+||+||++|+||+|..||+..+-.+++.+|++-+-.
T Consensus 255 -----------------------------------~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~~ 299 (1317)
T KOG0612|consen 255 -----------------------------------KGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKES 299 (1317)
T ss_pred -----------------------------------ccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhhh
Confidence 013788999999999999999999999999999999999988544
Q ss_pred CCCCcCCCCCccHHHHHHHhcccCCCCCCC---HHHHHcCCCCCCCCC
Q psy3880 240 FSSPEWNDISEDPKDLIRKLLIVTPEDRYS---VKEALNHSFFHPKLF 284 (408)
Q Consensus 240 f~~~~~~~iS~~~~dLI~klL~~dP~~R~t---a~e~L~Hpwf~~~~~ 284 (408)
|..|.-.+||++++|||+++|+ +|+.|+. ++++.+||||.+..|
T Consensus 300 l~FP~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~HpFF~g~~W 346 (1317)
T KOG0612|consen 300 LSFPDETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNHPFFEGIDW 346 (1317)
T ss_pred cCCCcccccCHHHHHHHHHHhc-ChhhhcccccHHHHHhCccccCCCh
Confidence 4444445699999999999986 8999998 999999999988765
No 35
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=2.7e-36 Score=300.53 Aligned_cols=197 Identities=31% Similarity=0.529 Sum_probs=142.8
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC-----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEE
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN-----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENIL 78 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~-----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NIL 78 (408)
.+.|+++| .+.+ ++.+..|+||||+.||+ |.+.+. ++.+++.++.|++.||+|||++||+||||||+|||
T Consensus 57 ~~~~~~iv-~~~~~~~~~~~~~lv~E~~~gg~--L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NIL 133 (363)
T cd05628 57 EADSLWVV-KMFYSFQDKLNLYLIMEFLPGGD--MMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLL 133 (363)
T ss_pred hCCCCCcc-eEEEEEecCCeEEEEEcCCCCCc--HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeE
Confidence 45788755 5443 45567899999999998 888764 35889999999999999999999999999999999
Q ss_pred EecCCCEEEeccccchhcccCcc------------------------------------cccCCCCCcccChhhhhhccc
Q psy3880 79 LDDQMNVKLTDFGFARVLKKGEK------------------------------------LMDLCGTPGYLAPEVLRANMF 122 (408)
Q Consensus 79 l~~~~~iKl~DFGla~~~~~~~~------------------------------------~~~~~gt~~y~aPE~l~~~~~ 122 (408)
++.++.+||+|||+|+.+..... ....+||+.|+|||++..
T Consensus 134 i~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~--- 210 (363)
T cd05628 134 LDSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQ--- 210 (363)
T ss_pred ECCCCCEEEeeccCcccccccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcC---
Confidence 99999999999999876532110 012345555555555432
Q ss_pred cCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcc
Q psy3880 123 EDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAV 202 (408)
Q Consensus 123 ~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~ 202 (408)
. .|+.++
T Consensus 211 ---~----------------------------------------------------------------------~~~~~~ 217 (363)
T cd05628 211 ---T----------------------------------------------------------------------GYNKLC 217 (363)
T ss_pred ---C----------------------------------------------------------------------CCCCch
Confidence 1 234456
Q ss_pred cccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCCCCCCCcCCCCCccHHHHHHHhcccCCCC---CCCHHHHHcCCCC
Q psy3880 203 DVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPED---RYSVKEALNHSFF 279 (408)
Q Consensus 203 DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~---R~ta~e~L~Hpwf 279 (408)
|+||+||++|+|++|.+||.+.+..+....+.........+.+..+|++++|||.+||. +|.+ |||++|+++||||
T Consensus 218 DvwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~~~~r~~r~~~~ei~~hp~f 296 (363)
T cd05628 218 DWWSLGVIMYEMLIGYPPFCSETPQETYKKVMNWKETLIFPPEVPISEKAKDLILRFCC-EWEHRIGAPGVEEIKTNPFF 296 (363)
T ss_pred hhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCcCcccCCCcCCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhCCCCC
Confidence 66666666666666666666655556666666544333334445689999999999886 5555 5799999999999
Q ss_pred CCC
Q psy3880 280 HPK 282 (408)
Q Consensus 280 ~~~ 282 (408)
+..
T Consensus 297 ~~~ 299 (363)
T cd05628 297 EGV 299 (363)
T ss_pred CCC
Confidence 875
No 36
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=3.9e-36 Score=289.54 Aligned_cols=221 Identities=27% Similarity=0.441 Sum_probs=159.9
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhh------CCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcE
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDII------NSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENI 77 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~------~~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NI 77 (408)
.+.|+|++ ++.+ ..++..++||||+.+ . |.+.+ .+...++.++.||+.||+|||++||+||||||+||
T Consensus 59 ~l~h~niv-~~~~~~~~~~~~~lv~e~~~~-~--l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Ni 134 (288)
T cd07871 59 NLKHANIV-TLHDIIHTERCLTLVFEYLDS-D--LKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNL 134 (288)
T ss_pred hCCCCCEe-eEEEEEcCCCeEEEEEeCCCc-C--HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHE
Confidence 46898855 6554 345567899999986 4 55544 24578899999999999999999999999999999
Q ss_pred EEecCCCEEEeccccchhcccCc-ccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchh
Q psy3880 78 LLDDQMNVKLTDFGFARVLKKGE-KLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQ 156 (408)
Q Consensus 78 Ll~~~~~iKl~DFGla~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~ 156 (408)
|++.++.+||+|||+++...... ......+|+.|+|||++.+. ..++.++|+||+||++|+|++|.+||.+.+.
T Consensus 135 l~~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-----~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~ 209 (288)
T cd07871 135 LINEKGELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGS-----TEYSTPIDMWGVGCILYEMATGRPMFPGSTV 209 (288)
T ss_pred EECCCCCEEECcCcceeeccCCCccccCceecccccChHHhcCC-----cccCcHHHHHHHHHHHHHHHhCCCCCCCCCH
Confidence 99999999999999987643222 23346789999999998642 4578899999999999999999999998887
Q ss_pred HHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhc
Q psy3880 157 MVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEG 236 (408)
Q Consensus 157 ~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~ 236 (408)
.+.+..+...........|..+. ..+.+... ..|-+...
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~---------------------------~~~~~~~~----------- 248 (288)
T cd07871 210 KEELHLIFRLLGTPTEETWPGIT---SNEEFRSY---------------------------LFPQYRAQ----------- 248 (288)
T ss_pred HHHHHHHHHHhCCCChHHhhccc---cchhhhcc---------------------------ccCccCCC-----------
Confidence 77766665543332222222110 00000000 00000000
Q ss_pred CCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q psy3880 237 KYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFF 279 (408)
Q Consensus 237 ~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf 279 (408)
........++++++|||++||++||.+||||+|+|+||||
T Consensus 249 ---~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~hp~f 288 (288)
T cd07871 249 ---PLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRHSYF 288 (288)
T ss_pred ---chHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcCCCC
Confidence 0001124578999999999999999999999999999998
No 37
>KOG0667|consensus
Probab=100.00 E-value=7.3e-36 Score=302.53 Aligned_cols=237 Identities=24% Similarity=0.362 Sum_probs=166.5
Q ss_pred CcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhCC-------HHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEec
Q psy3880 11 RVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIINS-------NPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDD 81 (408)
Q Consensus 11 ~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~~-------~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl~~ 81 (408)
..+|++++ ...+..+||+|++.-. |++.|.. -..+|.++.|||.||.+||+.||||+|||||||||.+
T Consensus 248 ~n~Vrm~d~F~fr~HlciVfELL~~N---LYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~ 324 (586)
T KOG0667|consen 248 YNIVRMLDYFYFRNHLCIVFELLSTN---LYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKD 324 (586)
T ss_pred eeEEEeeeccccccceeeeehhhhhh---HHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeecc
Confidence 34667776 5678889999999765 6777643 3899999999999999999999999999999999975
Q ss_pred C--CCEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHHH
Q psy3880 82 Q--MNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVM 159 (408)
Q Consensus 82 ~--~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~~ 159 (408)
- ..|||+|||.|...... ..+++-+++|+|||+|.+ .+|+.++||||||||++||++|.+.|.+.++.++
T Consensus 325 ~~r~~vKVIDFGSSc~~~q~--vytYiQSRfYRAPEVILG------lpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQ 396 (586)
T KOG0667|consen 325 PKRSRIKVIDFGSSCFESQR--VYTYIQSRFYRAPEVILG------LPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQ 396 (586)
T ss_pred CCcCceeEEecccccccCCc--ceeeeeccccccchhhcc------CCCCCccceeehhhhHHhHhcCccccCCCCHHHH
Confidence 3 47999999999876543 347889999999999986 5789999999999999999999999999999999
Q ss_pred HHHHHhccccCCCCCCccCCCCCchHHHhhh-----cccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHH--H
Q psy3880 160 LRNIMEGKYSFSSPEWNDISGYLAPEVLRAN-----MFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLR--N 232 (408)
Q Consensus 160 ~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~-----~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~--~ 232 (408)
+..|++-- +..+++.|... .|.....+..-+..|+. ++.. ...+..+ .
T Consensus 397 l~~I~e~l------------G~Pp~~mL~~~~~~~kff~~~~~~~~~~~~~~~------------~~~~-k~~~~~~~~~ 451 (586)
T KOG0667|consen 397 LARIIEVL------------GLPPPKMLDTAKKAHKFFTSLKGFPRLCVETSA------------PRGT-KSPEVRKYYR 451 (586)
T ss_pred HHHHHHHh------------CCCCHHHHHhccccceehhccCCceeeeeeecc------------cccc-cchhhhhhhh
Confidence 99998732 22222332211 11100111111222221 1111 0011111 1
Q ss_pred HHhcCCCC--CCCcCCC-----CCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCCC
Q psy3880 233 IMEGKYSF--SSPEWND-----ISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKL 283 (408)
Q Consensus 233 i~~~~~~f--~~~~~~~-----iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~~ 283 (408)
........ ....|.. -.....|||++||.+||.+|+|+.|+|+||||....
T Consensus 452 ~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp~qal~Hpfl~~~~ 509 (586)
T KOG0667|consen 452 KARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERITPAQALNHPFLTGTS 509 (586)
T ss_pred hhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCCHHHHhcCccccccc
Confidence 11111111 1122221 123568999999999999999999999999998653
No 38
>KOG0603|consensus
Probab=100.00 E-value=2.9e-36 Score=304.36 Aligned_cols=188 Identities=33% Similarity=0.500 Sum_probs=149.0
Q ss_pred cccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhCCH----HHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEE-
Q psy3880 7 VAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIINSN----PALRYIMRQLFEALEHVHNHSVVHRDLKPENILL- 79 (408)
Q Consensus 7 ~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~~~----~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl- 79 (408)
..|+| |+.+.+ ++....|+|||++.||+ +.+.+... .+++.|+.||+.|+.|||++|||||||||+|||+
T Consensus 373 ~~h~n-iv~~~~v~~~~~~~~~v~e~l~g~e--ll~ri~~~~~~~~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~ 449 (612)
T KOG0603|consen 373 RDHPN-IVKSHDVYEDGKEIYLVMELLDGGE--LLRRIRSKPEFCSEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLD 449 (612)
T ss_pred cCCCc-ceeecceecCCceeeeeehhccccH--HHHHHHhcchhHHHHHHHHHHHHHHHHHHHhcCeeecCCChhheeec
Confidence 46777 546655 45556799999999999 88887654 4778899999999999999999999999999999
Q ss_pred ecCCCEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHHH
Q psy3880 80 DDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVM 159 (408)
Q Consensus 80 ~~~~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~~ 159 (408)
++.++++|+|||+++.+... ..+.|-|..|.|||++.. .+|+.+|||||||+++|+||+|+.||......
T Consensus 450 ~~~g~lrltyFG~a~~~~~~--~~tp~~t~~y~APEvl~~------~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~-- 519 (612)
T KOG0603|consen 450 GSAGHLRLTYFGFWSELERS--CDTPALTLQYVAPEVLAI------QEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG-- 519 (612)
T ss_pred CCCCcEEEEEechhhhCchh--hcccchhhcccChhhhcc------CCCCcchhhHHHHHHHHHHHhCCCccccCCch--
Confidence 58899999999999887665 455678889999999863 45677777777777777777777766443221
Q ss_pred HHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCCC
Q psy3880 160 LRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYS 239 (408)
Q Consensus 160 ~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~~ 239 (408)
.++...|..+.+.
T Consensus 520 -------------------------------------------------------------------~ei~~~i~~~~~s 532 (612)
T KOG0603|consen 520 -------------------------------------------------------------------IEIHTRIQMPKFS 532 (612)
T ss_pred -------------------------------------------------------------------HHHHHhhcCCccc
Confidence 2333334333322
Q ss_pred CCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCC
Q psy3880 240 FSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFH 280 (408)
Q Consensus 240 f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~ 280 (408)
..+|++|||||++||++||.+|+|+.+++.||||.
T Consensus 533 ------~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~~ 567 (612)
T KOG0603|consen 533 ------ECVSDEAKDLLQQLLQVDPALRLGADEIGAHPWFL 567 (612)
T ss_pred ------cccCHHHHHHHHHhccCChhhCcChhhhccCcchh
Confidence 46899999999999999999999999999999993
No 39
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=5.9e-36 Score=291.83 Aligned_cols=194 Identities=37% Similarity=0.636 Sum_probs=148.2
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC-----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEE
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN-----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENIL 78 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~-----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NIL 78 (408)
.+.|+|+| .+.+ ..++..|+||||+.||+ |.+.+. ++..++.++.||+.||+|||++||+||||||+|||
T Consensus 49 ~l~h~~iv-~~~~~~~~~~~~~lv~e~~~~g~--L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nil 125 (312)
T cd05585 49 QVNCPFIV-PLKFSFQSPEKLYLVLAFINGGE--LFHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENIL 125 (312)
T ss_pred hCCCCcEe-ceeeEEecCCeEEEEEcCCCCCc--HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeE
Confidence 35788755 5443 45567899999999999 887763 45788999999999999999999999999999999
Q ss_pred EecCCCEEEeccccchhcccC-cccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhH
Q psy3880 79 LDDQMNVKLTDFGFARVLKKG-EKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 157 (408)
Q Consensus 79 l~~~~~iKl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~ 157 (408)
++.++.+||+|||+++..... ......+||+.|+|||++.. ..|+.++|+||+||++|+|++|..||
T Consensus 126 i~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DvwslGvil~el~tg~~pf------ 193 (312)
T cd05585 126 LDYQGHIALCDFGLCKLNMKDDDKTNTFCGTPEYLAPELLLG------HGYTKAVDWWTLGVLLYEMLTGLPPF------ 193 (312)
T ss_pred ECCCCcEEEEECcccccCccCCCccccccCCcccCCHHHHcC------CCCCCccceechhHHHHHHHhCCCCc------
Confidence 999999999999999754322 22345689999999998854 23455555555555555555555555
Q ss_pred HHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcC
Q psy3880 158 VMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 237 (408)
Q Consensus 158 ~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~ 237 (408)
...+..++.+.+..+.
T Consensus 194 ----------------------------------------------------------------~~~~~~~~~~~~~~~~ 209 (312)
T cd05585 194 ----------------------------------------------------------------YDENVNEMYRKILQEP 209 (312)
T ss_pred ----------------------------------------------------------------CCCCHHHHHHHHHcCC
Confidence 4444444455555554
Q ss_pred CCCCCCcCCCCCccHHHHHHHhcccCCCCCC---CHHHHHcCCCCCCC
Q psy3880 238 YSFSSPEWNDISEDPKDLIRKLLIVTPEDRY---SVKEALNHSFFHPK 282 (408)
Q Consensus 238 ~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~---ta~e~L~Hpwf~~~ 282 (408)
..++ ..+++++++||.+||..||++|+ +|.|+|+||||...
T Consensus 210 ~~~~----~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~hp~~~~~ 253 (312)
T cd05585 210 LRFP----DGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNHPFFSQL 253 (312)
T ss_pred CCCC----CcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcCCCcCCC
Confidence 4443 35789999999999999999997 58999999999764
No 40
>KOG0690|consensus
Probab=100.00 E-value=6.2e-37 Score=286.88 Aligned_cols=191 Identities=34% Similarity=0.619 Sum_probs=159.5
Q ss_pred cEEEEecc--CCcHHHHHHHHHhhchhhHHhhhC-----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEecCCC
Q psy3880 12 VVVRVKEE--GDDLKHLAAQVVDKGEAAVQDIIN-----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMN 84 (408)
Q Consensus 12 ~i~~~~~~--~~~~~~lv~e~~~~g~~~l~~~~~-----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl~~~~~ 84 (408)
++..+++. ..|...+||||+.||| ||-++. +++.+|+|-.+|+.||.|||+++||+||||.+|+|++.+|+
T Consensus 229 FLt~LKYsFQt~drlCFVMeyanGGe--Lf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDGH 306 (516)
T KOG0690|consen 229 FLTSLKYSFQTQDRLCFVMEYANGGE--LFFHLSRERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDGH 306 (516)
T ss_pred HHHHhhhhhccCceEEEEEEEccCce--EeeehhhhhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCCc
Confidence 44455553 3466789999999999 887765 44889999999999999999999999999999999999999
Q ss_pred EEEeccccchh-cccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHHHHHHH
Q psy3880 85 VKLTDFGFARV-LKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI 163 (408)
Q Consensus 85 iKl~DFGla~~-~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~~~~~i 163 (408)
|||+|||+++. +..+....++||||.|+|||++..+
T Consensus 307 IKitDFGLCKE~I~~g~t~kTFCGTPEYLAPEVleDn------------------------------------------- 343 (516)
T KOG0690|consen 307 IKITDFGLCKEEIKYGDTTKTFCGTPEYLAPEVLEDN------------------------------------------- 343 (516)
T ss_pred eEeeecccchhcccccceeccccCChhhcCchhhccc-------------------------------------------
Confidence 99999999975 4456667889999999999998532
Q ss_pred HhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCCCCCCC
Q psy3880 164 MEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSP 243 (408)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~~f~~~ 243 (408)
.||.++|+|.+||+||+|.||+.||+.+....++..|+-+...|+.
T Consensus 344 ---------------------------------DYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~ed~kFPr- 389 (516)
T KOG0690|consen 344 ---------------------------------DYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILMEDLKFPR- 389 (516)
T ss_pred ---------------------------------cccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhhhccCCc-
Confidence 2555677777777777777777777777777777788888878864
Q ss_pred cCCCCCccHHHHHHHhcccCCCCCCC-----HHHHHcCCCCCCCCC
Q psy3880 244 EWNDISEDPKDLIRKLLIVTPEDRYS-----VKEALNHSFFHPKLF 284 (408)
Q Consensus 244 ~~~~iS~~~~dLI~klL~~dP~~R~t-----a~e~L~Hpwf~~~~~ 284 (408)
.+|++|+.|+..+|.+||.+|+. |.|+.+|+||....+
T Consensus 390 ---~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~FF~~v~W 432 (516)
T KOG0690|consen 390 ---TLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRFFASVDW 432 (516)
T ss_pred ---cCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhhhhhccCCH
Confidence 68999999999999999999985 899999999987643
No 41
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=1e-35 Score=285.86 Aligned_cols=216 Identities=30% Similarity=0.455 Sum_probs=159.6
Q ss_pred cccCCcEEEEec-------cCCcHHHHHHHHHhhchhhHHhhh-------CCHHHHHHHHHHHHHHHHHHHHCCCeeccC
Q psy3880 7 VAHSRVVVRVKE-------EGDDLKHLAAQVVDKGEAAVQDII-------NSNPALRYIMRQLFEALEHVHNHSVVHRDL 72 (408)
Q Consensus 7 ~~~~~~i~~~~~-------~~~~~~~lv~e~~~~g~~~l~~~~-------~~~~~~r~i~~qil~aL~~LH~~~IvHRDL 72 (408)
+.|+|++ ++.+ +.....++|||++.++ |.+.+ .+...+..++.||+.||.|||++||+||||
T Consensus 61 ~~hpniv-~~~~~~~~~~~~~~~~~~lv~e~~~~~---l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dl 136 (290)
T cd07862 61 FEHPNVV-RLFDVCTVSRTDRETKLTLVFEHVDQD---LTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDL 136 (290)
T ss_pred cCCCCcc-eEEEEEecccCCCCCcEEEEEccCCCC---HHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCC
Confidence 4688855 5443 1334578999999754 44444 245788999999999999999999999999
Q ss_pred CCCcEEEecCCCEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCC
Q psy3880 73 KPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFW 152 (408)
Q Consensus 73 Kp~NILl~~~~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~ 152 (408)
||+|||++.++.+||+|||++.............||+.|+|||++.. ..++.++|+||+||++|+|++|.+||.
T Consensus 137 kp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~------~~~~~~~DiwslG~il~el~~g~~~f~ 210 (290)
T cd07862 137 KPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQ------SSYATPVDLWSVGCIFAEMFRRKPLFR 210 (290)
T ss_pred CHHHEEEcCCCCEEEccccceEeccCCcccccccccccccChHHHhC------CCCCCccchHHHHHHHHHHHcCCCCcC
Confidence 99999999999999999999987655444455789999999999864 357889999999999999999999999
Q ss_pred CchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHH
Q psy3880 153 HRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRN 232 (408)
Q Consensus 153 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~ 232 (408)
+.+..+.+.+|...........|...... . .. .+...++ ..+..
T Consensus 211 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~-~------------------~~----------~~~~~~~-------~~~~~ 254 (290)
T cd07862 211 GSSDVDQLGKILDVIGLPGEEDWPRDVAL-P------------------RQ----------AFHSKSA-------QPIEK 254 (290)
T ss_pred CCCHHHHHHHHHHHhCCCChhhchhhhcc-c------------------ch----------hccCCCC-------CCHHH
Confidence 99888888888764322221111110000 0 00 0000000 00001
Q ss_pred HHhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q psy3880 233 IMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFF 279 (408)
Q Consensus 233 i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf 279 (408)
....+++.+++||.+||+.||++|||+.|+|+||||
T Consensus 255 -----------~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~hp~f 290 (290)
T cd07862 255 -----------FVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 290 (290)
T ss_pred -----------HccCCCHHHHHHHHHHhccCchhcCCHHHHhcCCCC
Confidence 113578899999999999999999999999999998
No 42
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=5.6e-36 Score=294.37 Aligned_cols=192 Identities=34% Similarity=0.660 Sum_probs=147.7
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC-----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEE
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN-----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENIL 78 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~-----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NIL 78 (408)
.+.|+|+| .+.+ +.++..|+||||+.||. |.+.+. ++..++.++.||+.||+|||++||+||||||+|||
T Consensus 74 ~l~hp~iv-~~~~~~~~~~~~~lv~e~~~~~~--L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIl 150 (329)
T PTZ00263 74 ELSHPFIV-NMMCSFQDENRVYFLLEFVVGGE--LFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLL 150 (329)
T ss_pred hCCCCCCC-cEEEEEEcCCEEEEEEcCCCCCh--HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEE
Confidence 46798866 4443 45677899999999998 877764 44788999999999999999999999999999999
Q ss_pred EecCCCEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHH
Q psy3880 79 LDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMV 158 (408)
Q Consensus 79 l~~~~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~ 158 (408)
++.++.+||+|||++...... ....+||+.|+|||++... .++.++|+|||||++|+|++|..|
T Consensus 151 l~~~~~~kl~Dfg~~~~~~~~--~~~~~gt~~y~aPE~~~~~------~~~~~~DiwslG~il~elltg~~p-------- 214 (329)
T PTZ00263 151 LDNKGHVKVTDFGFAKKVPDR--TFTLCGTPEYLAPEVIQSK------GHGKAVDWWTMGVLLYEFIAGYPP-------- 214 (329)
T ss_pred ECCCCCEEEeeccCceEcCCC--cceecCChhhcCHHHHcCC------CCCCcceeechHHHHHHHHcCCCC--------
Confidence 999999999999999866432 2356899999999998642 344555555555555555555554
Q ss_pred HHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCC
Q psy3880 159 MLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKY 238 (408)
Q Consensus 159 ~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~ 238 (408)
|.+.+.....+.+..+..
T Consensus 215 --------------------------------------------------------------f~~~~~~~~~~~i~~~~~ 232 (329)
T PTZ00263 215 --------------------------------------------------------------FFDDTPFRIYEKILAGRL 232 (329)
T ss_pred --------------------------------------------------------------CCCCCHHHHHHHHhcCCc
Confidence 444444445555666554
Q ss_pred CCCCCcCCCCCccHHHHHHHhcccCCCCCCC-----HHHHHcCCCCCCC
Q psy3880 239 SFSSPEWNDISEDPKDLIRKLLIVTPEDRYS-----VKEALNHSFFHPK 282 (408)
Q Consensus 239 ~f~~~~~~~iS~~~~dLI~klL~~dP~~R~t-----a~e~L~Hpwf~~~ 282 (408)
.++. .++.++++||++||+.||.+|++ ++++++||||...
T Consensus 233 ~~p~----~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp~f~~~ 277 (329)
T PTZ00263 233 KFPN----WFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYFHGA 277 (329)
T ss_pred CCCC----CCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCccCCC
Confidence 4432 37889999999999999999997 7999999999764
No 43
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=9.2e-36 Score=297.80 Aligned_cols=202 Identities=29% Similarity=0.513 Sum_probs=157.8
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEE
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILL 79 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl 79 (408)
.+.|++++ .+.+ +.++..|+||||+.||+ |.+.+. ++..++.++.||+.||+|||++||+||||||+|||+
T Consensus 99 ~~~h~~iv-~~~~~~~~~~~~~lv~Ey~~gg~--L~~~l~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl 175 (370)
T cd05596 99 HANSEWIV-QLHYAFQDDKYLYMVMEYMPGGD--LVNLMSNYDIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLL 175 (370)
T ss_pred hCCCCCcc-eEEEEEecCCEEEEEEcCCCCCc--HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEE
Confidence 46788755 5443 55667899999999998 877663 357889999999999999999999999999999999
Q ss_pred ecCCCEEEeccccchhcccCcc--cccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhH
Q psy3880 80 DDQMNVKLTDFGFARVLKKGEK--LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 157 (408)
Q Consensus 80 ~~~~~iKl~DFGla~~~~~~~~--~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~ 157 (408)
+.++.+||+|||++........ ....+||+.|+|||++..... ..
T Consensus 176 ~~~~~~kL~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~--~~------------------------------- 222 (370)
T cd05596 176 DKSGHLKLADFGTCMKMDANGMVRCDTAVGTPDYISPEVLKSQGG--DG------------------------------- 222 (370)
T ss_pred cCCCCEEEEeccceeeccCCCcccCCCCCCCcCeECHHHhccCCC--CC-------------------------------
Confidence 9999999999999986643321 234679999999999864210 01
Q ss_pred HHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcC
Q psy3880 158 VMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 237 (408)
Q Consensus 158 ~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~ 237 (408)
.|+.++|+||+||++|+|++|.+||.+.+....+..|....
T Consensus 223 ---------------------------------------~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~ 263 (370)
T cd05596 223 ---------------------------------------YYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHK 263 (370)
T ss_pred ---------------------------------------CCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCC
Confidence 13345666666666666667777776666666677777765
Q ss_pred CCCCCCcCCCCCccHHHHHHHhcccCCCC--CCCHHHHHcCCCCCCC
Q psy3880 238 YSFSSPEWNDISEDPKDLIRKLLIVTPED--RYSVKEALNHSFFHPK 282 (408)
Q Consensus 238 ~~f~~~~~~~iS~~~~dLI~klL~~dP~~--R~ta~e~L~Hpwf~~~ 282 (408)
.....+.+..+|.++++||++||+.+|.+ |+|++|+++||||...
T Consensus 264 ~~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~~~~~~ 310 (370)
T cd05596 264 NSLTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSHPFFKND 310 (370)
T ss_pred CcCCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcCcccCCC
Confidence 55555556678999999999999999998 9999999999999864
No 44
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=6.6e-36 Score=293.85 Aligned_cols=194 Identities=34% Similarity=0.596 Sum_probs=147.6
Q ss_pred ccccCCcEEEEe--ccCCcHHHHHHHHHhhchhhHHhhhC-----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEE
Q psy3880 6 MVAHSRVVVRVK--EEGDDLKHLAAQVVDKGEAAVQDIIN-----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENIL 78 (408)
Q Consensus 6 ~~~~~~~i~~~~--~~~~~~~~lv~e~~~~g~~~l~~~~~-----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NIL 78 (408)
.+.|++++ .+. .+.++..|+||||+.+|. |.+.+. ++.+++.++.||+.||+|||++||+||||||+|||
T Consensus 51 ~l~hp~iv-~~~~~~~~~~~~~lv~Ey~~~g~--L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIl 127 (328)
T cd05593 51 NTRHPFLT-SLKYSFQTKDRLCFVMEYVNGGE--LFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLM 127 (328)
T ss_pred hCCCCCCc-ceEEEEEcCCEEEEEEeCCCCCC--HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeE
Confidence 35788755 443 356677899999999998 776653 45789999999999999999999999999999999
Q ss_pred EecCCCEEEeccccchhccc-CcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhH
Q psy3880 79 LDDQMNVKLTDFGFARVLKK-GEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 157 (408)
Q Consensus 79 l~~~~~iKl~DFGla~~~~~-~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~ 157 (408)
++.++.+||+|||+++.... .......+||+.|+|||++.. ..++.++|+||+||++|+|++|..||.+
T Consensus 128 l~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslGvil~elltG~~Pf~~---- 197 (328)
T cd05593 128 LDKDGHIKITDFGLCKEGITDAATMKTFCGTPEYLAPEVLED------NDYGRAVDWWGLGVVMYEMMCGRLPFYN---- 197 (328)
T ss_pred ECCCCcEEEecCcCCccCCCcccccccccCCcCccChhhhcC------CCCCccCCccccchHHHHHhhCCCCCCC----
Confidence 99999999999999875432 223345689999999999854 2345666666666666666666666543
Q ss_pred HHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcC
Q psy3880 158 VMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 237 (408)
Q Consensus 158 ~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~ 237 (408)
.+.......+....
T Consensus 198 ------------------------------------------------------------------~~~~~~~~~~~~~~ 211 (328)
T cd05593 198 ------------------------------------------------------------------QDHEKLFELILMED 211 (328)
T ss_pred ------------------------------------------------------------------CCHHHHHHHhccCC
Confidence 33333333444444
Q ss_pred CCCCCCcCCCCCccHHHHHHHhcccCCCCCC-----CHHHHHcCCCCCCC
Q psy3880 238 YSFSSPEWNDISEDPKDLIRKLLIVTPEDRY-----SVKEALNHSFFHPK 282 (408)
Q Consensus 238 ~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~-----ta~e~L~Hpwf~~~ 282 (408)
..++ ..+|+++++||++||+.||++|+ |++|+++||||...
T Consensus 212 ~~~p----~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~ 257 (328)
T cd05593 212 IKFP----RTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSFFTGV 257 (328)
T ss_pred ccCC----CCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence 3333 35799999999999999999998 89999999999764
No 45
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=1.4e-35 Score=296.63 Aligned_cols=202 Identities=29% Similarity=0.506 Sum_probs=156.6
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEE
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILL 79 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl 79 (408)
.+.|+++| .+.+ +.++..|+||||+.||+ |.+.+. ++..++.++.||+.||+|||++||+||||||+|||+
T Consensus 99 ~~~hp~iv-~~~~~~~~~~~~~lv~Ey~~gg~--L~~~l~~~~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl 175 (370)
T cd05621 99 FANSPWVV-QLFCAFQDDKYLYMVMEYMPGGD--LVNLMSNYDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLL 175 (370)
T ss_pred hCCCCCEe-eEEEEEEcCCEEEEEEcCCCCCc--HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEE
Confidence 46788755 5554 45567899999999998 877764 357899999999999999999999999999999999
Q ss_pred ecCCCEEEeccccchhcccCcc--cccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhH
Q psy3880 80 DDQMNVKLTDFGFARVLKKGEK--LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 157 (408)
Q Consensus 80 ~~~~~iKl~DFGla~~~~~~~~--~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~ 157 (408)
+.++.+||+|||+|..+..... ....+||+.|+|||++..... ..
T Consensus 176 ~~~~~~kL~DFG~a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~--~~------------------------------- 222 (370)
T cd05621 176 DKHGHLKLADFGTCMKMDETGMVRCDTAVGTPDYISPEVLKSQGG--DG------------------------------- 222 (370)
T ss_pred CCCCCEEEEecccceecccCCceecccCCCCcccCCHHHHhccCC--CC-------------------------------
Confidence 9999999999999987643322 235689999999999864210 01
Q ss_pred HHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcC
Q psy3880 158 VMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 237 (408)
Q Consensus 158 ~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~ 237 (408)
.|+.++|+||+||++|+|++|.+||.+.+.......|....
T Consensus 223 ---------------------------------------~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~ 263 (370)
T cd05621 223 ---------------------------------------YYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHK 263 (370)
T ss_pred ---------------------------------------CCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCC
Confidence 13346677777777777777777777666666677777665
Q ss_pred CCCCCCcCCCCCccHHHHHHHhcccCCCC--CCCHHHHHcCCCCCCC
Q psy3880 238 YSFSSPEWNDISEDPKDLIRKLLIVTPED--RYSVKEALNHSFFHPK 282 (408)
Q Consensus 238 ~~f~~~~~~~iS~~~~dLI~klL~~dP~~--R~ta~e~L~Hpwf~~~ 282 (408)
..+..+.+..+|.++++||.+||+.+|.+ |+|++|+++||||+..
T Consensus 264 ~~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp~~~~~ 310 (370)
T cd05621 264 NSLNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPFFKND 310 (370)
T ss_pred cccCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcCcccCCC
Confidence 44544555678999999999999866544 8899999999999764
No 46
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=1.1e-35 Score=298.09 Aligned_cols=243 Identities=27% Similarity=0.402 Sum_probs=155.1
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC-----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEE
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN-----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENIL 78 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~-----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NIL 78 (408)
.+.|+++| ++.+ .+++..|+|||||.||+ |.+.+. ++..++.++.||+.||+|||++||+||||||+|||
T Consensus 57 ~~~h~~iv-~~~~~~~~~~~~~lv~E~~~gg~--L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NIL 133 (382)
T cd05625 57 EADNEWVV-RLYYSFQDKDNLYFVMDYIPGGD--MMSLLIRMGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNIL 133 (382)
T ss_pred hCCCCcCC-eEEEEEEeCCEEEEEEeCCCCCc--HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEE
Confidence 35788755 5554 45567899999999998 777653 45789999999999999999999999999999999
Q ss_pred EecCCCEEEeccccchhcccCccccc-CCCCCcccChhhhhhccccCcCCCC-cchhhhhhhHHHHHHHhCCCCCCCchh
Q psy3880 79 LDDQMNVKLTDFGFARVLKKGEKLMD-LCGTPGYLAPEVLRANMFEDATGYG-QAVDVWACGVIMYTLLVGCPPFWHRKQ 156 (408)
Q Consensus 79 l~~~~~iKl~DFGla~~~~~~~~~~~-~~gt~~y~aPE~l~~~~~~~~~~~~-~~~DiwSlGvil~~ll~G~~pf~~~~~ 156 (408)
++.++.+||+|||+|..+........ ..+.. ......-..... ...+. ...+.+....-.
T Consensus 134 l~~~g~~kL~DFGla~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~--------------- 195 (382)
T cd05625 134 IDRDGHIKLTDFGLCTGFRWTHDSKYYQSGDH-VRQDSMDFSNEW--GDPANCRCGDRLKPLERR--------------- 195 (382)
T ss_pred ECCCCCEEEeECCCCccccccccccccccccc-cccccccccccc--cccccccccccccchhhh---------------
Confidence 99999999999999864321100000 00000 000000000000 00000 000000000000
Q ss_pred HHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhc
Q psy3880 157 MVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEG 236 (408)
Q Consensus 157 ~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~ 236 (408)
.......-......++..|++||++... +|+.++|+||+||++|+|++|.+||.+.+..+....+...
T Consensus 196 ------~~~~~~~~~~~~~~gt~~Y~aPE~~~~~------~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~ 263 (382)
T cd05625 196 ------AARQHQRCLAHSLVGTPNYIAPEVLLRT------GYTQLCDWWSVGVILYEMLVGQPPFLAQTPLETQMKVINW 263 (382)
T ss_pred ------hccccccccccccccCcccCCHHHhcCC------CCCCeeeEEechHHHHHHHhCCCCCCCCCHHHHHHHHHcc
Confidence 0000000000112234557777766532 4566788888888888888888888877776666677665
Q ss_pred CCCCCCCcCCCCCccHHHHHHHhcccCCCCCCC---HHHHHcCCCCCCC
Q psy3880 237 KYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYS---VKEALNHSFFHPK 282 (408)
Q Consensus 237 ~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~t---a~e~L~Hpwf~~~ 282 (408)
......+.+..+|++++|||.+|+ .||.+|++ ++|+++||||...
T Consensus 264 ~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp~f~~~ 311 (382)
T cd05625 264 QTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKAHPFFKTI 311 (382)
T ss_pred CCCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhcCCCcCCc
Confidence 555555666789999999999987 59999997 9999999999764
No 47
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=6.5e-36 Score=295.64 Aligned_cols=192 Identities=34% Similarity=0.632 Sum_probs=147.6
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC-----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEE
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN-----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENIL 78 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~-----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NIL 78 (408)
.+.|+++| .+.+ +..+..|+||||+.||+ |.+.+. ++..++.++.||+.||+|||++||+||||||+|||
T Consensus 87 ~l~hp~Iv-~~~~~~~~~~~~~lv~Ey~~~g~--L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIL 163 (340)
T PTZ00426 87 YINHPFCV-NLYGSFKDESYLYLVLEFVIGGE--FFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLL 163 (340)
T ss_pred hCCCCCCc-ceEEEEEeCCEEEEEEeCCCCCc--HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEE
Confidence 35788755 5543 45567899999999998 887764 34788999999999999999999999999999999
Q ss_pred EecCCCEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHH
Q psy3880 79 LDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMV 158 (408)
Q Consensus 79 l~~~~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~ 158 (408)
++.++.+||+|||++..+... ....+||+.|+|||++.+ ..++.++|+
T Consensus 164 l~~~~~ikL~DFG~a~~~~~~--~~~~~gt~~y~aPE~~~~------~~~~~~~Di------------------------ 211 (340)
T PTZ00426 164 LDKDGFIKMTDFGFAKVVDTR--TYTLCGTPEYIAPEILLN------VGHGKAADW------------------------ 211 (340)
T ss_pred ECCCCCEEEecCCCCeecCCC--cceecCChhhcCHHHHhC------CCCCccccc------------------------
Confidence 999999999999999865432 245689999999999853 223444454
Q ss_pred HHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCC
Q psy3880 159 MLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKY 238 (408)
Q Consensus 159 ~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~ 238 (408)
||+||++|+|++|.+||...+...+...+..+..
T Consensus 212 ----------------------------------------------wSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~ 245 (340)
T PTZ00426 212 ----------------------------------------------WTLGIFIYEILVGCPPFYANEPLLIYQKILEGII 245 (340)
T ss_pred ----------------------------------------------cchhhHHHHHhcCCCCCCCCCHHHHHHHHhcCCC
Confidence 5555555555555555555444455556666655
Q ss_pred CCCCCcCCCCCccHHHHHHHhcccCCCCCC-----CHHHHHcCCCCCCC
Q psy3880 239 SFSSPEWNDISEDPKDLIRKLLIVTPEDRY-----SVKEALNHSFFHPK 282 (408)
Q Consensus 239 ~f~~~~~~~iS~~~~dLI~klL~~dP~~R~-----ta~e~L~Hpwf~~~ 282 (408)
.++ ..+++++++||++||+.||++|+ |++|+++||||...
T Consensus 246 ~~p----~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~f~~~ 290 (340)
T PTZ00426 246 YFP----KFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPWFGNI 290 (340)
T ss_pred CCC----CCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence 443 24789999999999999999996 89999999999764
No 48
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=1e-35 Score=295.88 Aligned_cols=235 Identities=27% Similarity=0.464 Sum_probs=152.1
Q ss_pred cccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC-----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEE
Q psy3880 7 VAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN-----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILL 79 (408)
Q Consensus 7 ~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~-----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl 79 (408)
+.|++++ .+.+ +.++..|+||||+.||+ |.+.+. ++..++.++.||+.||+|||++||+||||||+|||+
T Consensus 58 l~h~~iv-~~~~~~~~~~~~~lv~E~~~~g~--L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~ 134 (364)
T cd05599 58 ADNPWVV-KLYYSFQDENYLYLIMEYLPGGD--MMTLLMKKDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLL 134 (364)
T ss_pred CCCCCCc-ceEEEEEcCCeEEEEECCCCCcH--HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEE
Confidence 5688755 5443 55677899999999998 887764 458899999999999999999999999999999999
Q ss_pred ecCCCEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHHH
Q psy3880 80 DDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVM 159 (408)
Q Consensus 80 ~~~~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~~ 159 (408)
+.++.+||+|||++..+..............+..+........ ..........|...
T Consensus 135 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~--------------------- 191 (364)
T cd05599 135 DAKGHIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISK--PMSSKRKAETWKRN--------------------- 191 (364)
T ss_pred CCCCCEEEeecccceeccccccccccccccccccccccccccc--cccccccccchhhc---------------------
Confidence 9999999999999876532211000000000000000000000 00000000000000
Q ss_pred HHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCCC
Q psy3880 160 LRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYS 239 (408)
Q Consensus 160 ~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~~ 239 (408)
+ ........++..|++||++... +|+.++|+||+||++|+|++|.+||...+.......+......
T Consensus 192 -------~-~~~~~~~~gt~~y~aPE~~~~~------~~~~~~DiwSlG~il~el~~G~~Pf~~~~~~~~~~~i~~~~~~ 257 (364)
T cd05599 192 -------R-RALAYSTVGTPDYIAPEVFLQT------GYNKECDWWSLGVIMYEMLVGYPPFCSDNPQETYRKIINWKET 257 (364)
T ss_pred -------c-cccccccccCccccCHHHHcCC------CCCCeeeeecchhHHHHhhcCCCCCCCCCHHHHHHHHHcCCCc
Confidence 0 0000001123345666655332 3556777777777777777788887777766667777665555
Q ss_pred CCCCcCCCCCccHHHHHHHhcccCCCCCCC---HHHHHcCCCCCCC
Q psy3880 240 FSSPEWNDISEDPKDLIRKLLIVTPEDRYS---VKEALNHSFFHPK 282 (408)
Q Consensus 240 f~~~~~~~iS~~~~dLI~klL~~dP~~R~t---a~e~L~Hpwf~~~ 282 (408)
+..+....+|+++++||++||. ||.+|++ ++|+|+||||...
T Consensus 258 ~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h~~~~~~ 302 (364)
T cd05599 258 LQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSHPFFKGV 302 (364)
T ss_pred cCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcCCCcCCC
Confidence 5445555789999999999997 9999998 9999999999764
No 49
>KOG0597|consensus
Probab=100.00 E-value=3.4e-36 Score=298.54 Aligned_cols=193 Identities=31% Similarity=0.572 Sum_probs=155.7
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC-----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEE
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN-----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENIL 78 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~-----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NIL 78 (408)
-|.|+|+| ++.+ |.....++|.|||.| + |+.++. .++.++.+..+++.||.|||+++|+|||+||.|||
T Consensus 57 ~lkHpniv-~m~esfEt~~~~~vVte~a~g-~--L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniL 132 (808)
T KOG0597|consen 57 SLKHPNIV-EMLESFETSAHLWVVTEYAVG-D--LFTILEQDGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNIL 132 (808)
T ss_pred hcCCcchh-hHHHhhcccceEEEEehhhhh-h--HHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceee
Confidence 37899855 6555 455667899999998 6 888774 45899999999999999999999999999999999
Q ss_pred EecCCCEEEeccccchhcccCccc-ccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhH
Q psy3880 79 LDDQMNVKLTDFGFARVLKKGEKL-MDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 157 (408)
Q Consensus 79 l~~~~~iKl~DFGla~~~~~~~~~-~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~ 157 (408)
++..+.+|+||||+|+.+..++.. ....|||.|||||++.++ .|+..+|+||+||
T Consensus 133 l~~~~~~KlcdFg~Ar~m~~~t~vltsikGtPlYmAPElv~e~------pyd~~sDlWslGc------------------ 188 (808)
T KOG0597|consen 133 LEKGGTLKLCDFGLARAMSTNTSVLTSIKGTPLYMAPELVEEQ------PYDHTSDLWSLGC------------------ 188 (808)
T ss_pred ecCCCceeechhhhhhhcccCceeeeeccCcccccCHHHHcCC------CccchhhHHHHHH------------------
Confidence 999999999999999998876654 457899999999998753 3555555555555
Q ss_pred HHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcC
Q psy3880 158 VMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 237 (408)
Q Consensus 158 ~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~ 237 (408)
|+|++..|.|||+.++-..+.+.|....
T Consensus 189 ----------------------------------------------------ilYE~~~G~PPF~a~si~~Lv~~I~~d~ 216 (808)
T KOG0597|consen 189 ----------------------------------------------------ILYELYVGQPPFYARSITQLVKSILKDP 216 (808)
T ss_pred ----------------------------------------------------HHHHHhcCCCCchHHHHHHHHHHHhcCC
Confidence 5555555555555555566777777776
Q ss_pred CCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q psy3880 238 YSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPK 282 (408)
Q Consensus 238 ~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~ 282 (408)
..+++ .+|.++++||..+|++||.+|+|-.++|.|||++..
T Consensus 217 v~~p~----~~S~~f~nfl~gLL~kdP~~RltW~~Ll~HpF~k~~ 257 (808)
T KOG0597|consen 217 VKPPS----TASSSFVNFLQGLLIKDPAQRLTWTDLLGHPFWKGK 257 (808)
T ss_pred CCCcc----cccHHHHHHHHHHhhcChhhcccHHHHhcChHHhhh
Confidence 66554 689999999999999999999999999999999754
No 50
>KOG0614|consensus
Probab=100.00 E-value=4.4e-36 Score=294.52 Aligned_cols=197 Identities=34% Similarity=0.596 Sum_probs=160.5
Q ss_pred cccCCcEEEEeccCCc--HHHHHHHHHhhchhhHHhhhCCH-----HHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEE
Q psy3880 7 VAHSRVVVRVKEEGDD--LKHLAAQVVDKGEAAVQDIINSN-----PALRYIMRQLFEALEHVHNHSVVHRDLKPENILL 79 (408)
Q Consensus 7 ~~~~~~i~~~~~~~~~--~~~lv~e~~~~g~~~l~~~~~~~-----~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl 79 (408)
-.|+++||+++.+..| ..|+.||-|-||| |...+..+ .++++|+..+++|++|||++|||+|||||||+++
T Consensus 476 ~~~s~fIvrLYrTfrd~kyvYmLmEaClGGE--lWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllL 553 (732)
T KOG0614|consen 476 ECRSDFIVRLYRTFRDSKYVYMLMEACLGGE--LWTILRDRGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLL 553 (732)
T ss_pred hcCchHHHHHHHHhccchhhhhhHHhhcCch--hhhhhhhcCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheee
Confidence 3578999999987655 5689999999999 88887543 7999999999999999999999999999999999
Q ss_pred ecCCCEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHHH
Q psy3880 80 DDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVM 159 (408)
Q Consensus 80 ~~~~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~~ 159 (408)
+.+|.+||.|||+|+.+..+....++||||.|.|||++.. .+++.++|.||||+++|||++|.+||.
T Consensus 554 d~~Gy~KLVDFGFAKki~~g~KTwTFcGTpEYVAPEIILn------KGHD~avDyWaLGIli~ELL~G~pPFs------- 620 (732)
T KOG0614|consen 554 DNRGYLKLVDFGFAKKIGSGRKTWTFCGTPEYVAPEIILN------KGHDRAVDYWALGILIYELLTGSPPFS------- 620 (732)
T ss_pred ccCCceEEeehhhHHHhccCCceeeecCCcccccchhhhc------cCcchhhHHHHHHHHHHHHHcCCCCCC-------
Confidence 9999999999999999999998899999999999999974 345555555555555555555555554
Q ss_pred HHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCCC
Q psy3880 160 LRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYS 239 (408)
Q Consensus 160 ~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~~ 239 (408)
+.+++.++..|++|--.
T Consensus 621 ---------------------------------------------------------------~~dpmktYn~ILkGid~ 637 (732)
T KOG0614|consen 621 ---------------------------------------------------------------GVDPMKTYNLILKGIDK 637 (732)
T ss_pred ---------------------------------------------------------------CCchHHHHHHHHhhhhh
Confidence 44455555555554333
Q ss_pred CCCCcCCCCCccHHHHHHHhcccCCCCCCC-----HHHHHcCCCCCCCC
Q psy3880 240 FSSPEWNDISEDPKDLIRKLLIVTPEDRYS-----VKEALNHSFFHPKL 283 (408)
Q Consensus 240 f~~~~~~~iS~~~~dLI~klL~~dP~~R~t-----a~e~L~Hpwf~~~~ 283 (408)
...| ..++..|.+||+++...+|..|+. +.++.+|.||.+..
T Consensus 638 i~~P--r~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~gfd 684 (732)
T KOG0614|consen 638 IEFP--RRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRWFEGFD 684 (732)
T ss_pred hhcc--cccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhhhhhcCC
Confidence 2222 468999999999999999999996 89999999998754
No 51
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=1.5e-35 Score=296.46 Aligned_cols=240 Identities=27% Similarity=0.461 Sum_probs=155.7
Q ss_pred cccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC-----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEE
Q psy3880 7 VAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN-----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILL 79 (408)
Q Consensus 7 ~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~-----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl 79 (408)
+.|+++| .+.+ ++++..|+||||+.||+ |.+.+. ++..++.++.|++.||+|||++||+||||||+|||+
T Consensus 58 l~hp~iv-~~~~~~~~~~~~~lv~E~~~gg~--L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll 134 (377)
T cd05629 58 SDSPWVV-SLYYSFQDAQYLYLIMEFLPGGD--LMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILI 134 (377)
T ss_pred CCCCCcc-eEEEEEEcCCeeEEEEeCCCCCc--HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEE
Confidence 6788755 5554 45667899999999998 877763 357899999999999999999999999999999999
Q ss_pred ecCCCEEEeccccchhcccCcccc---c-CCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCch
Q psy3880 80 DDQMNVKLTDFGFARVLKKGEKLM---D-LCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRK 155 (408)
Q Consensus 80 ~~~~~iKl~DFGla~~~~~~~~~~---~-~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~ 155 (408)
+.++.+||+|||+|+.+....... . ..+... ..+ ... ......+.+++- .....
T Consensus 135 ~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~-~~~--~~~-------~~~~~~~~~~~~------------~~~~~ 192 (377)
T cd05629 135 DRGGHIKLSDFGLSTGFHKQHDSAYYQKLLQGKSN-KNR--IDN-------RNSVAVDSINLT------------MSSKD 192 (377)
T ss_pred CCCCCEEEeeccccccccccccccccccccccccc-ccc--ccc-------cccccccccccc------------ccchh
Confidence 999999999999997443211000 0 000000 000 000 000000000000 00000
Q ss_pred hHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHh
Q psy3880 156 QMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIME 235 (408)
Q Consensus 156 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~ 235 (408)
...... ... ........+...|++||++... .|+.++|+||+||++|+|++|.+||.+.+....+..+..
T Consensus 193 ~~~~~~---~~~-~~~~~~~~gt~~y~aPE~~~~~------~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~ 262 (377)
T cd05629 193 QIATWK---KNR-RLMAYSTVGTPDYIAPEIFLQQ------GYGQECDWWSLGAIMFECLIGWPPFCSENSHETYRKIIN 262 (377)
T ss_pred hhhhhh---hcc-cccccccCCCccccCHHHHccC------CCCCceeeEecchhhhhhhcCCCCCCCCCHHHHHHHHHc
Confidence 000000 000 0000012234567888877542 467788999999999999999999988777777777776
Q ss_pred cCCCCCCCcCCCCCccHHHHHHHhcccCCCCC---CCHHHHHcCCCCCCC
Q psy3880 236 GKYSFSSPEWNDISEDPKDLIRKLLIVTPEDR---YSVKEALNHSFFHPK 282 (408)
Q Consensus 236 ~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R---~ta~e~L~Hpwf~~~ 282 (408)
.......+.+..+|.+++|||++||. +|.+| +|+.|+|+||||...
T Consensus 263 ~~~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~hp~~~~~ 311 (377)
T cd05629 263 WRETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSHPFFRGV 311 (377)
T ss_pred cCCccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcCCCcCCC
Confidence 54444444555789999999999998 77776 599999999999764
No 52
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=1.1e-35 Score=286.09 Aligned_cols=198 Identities=31% Similarity=0.497 Sum_probs=152.0
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhh-------CCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCc
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDII-------NSNPALRYIMRQLFEALEHVHNHSVVHRDLKPEN 76 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~-------~~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~N 76 (408)
.+.|++++ .+.+ +.++..++||||+.+|. |.+.+ .++..+..++.|++.||+|||++||+||||||+|
T Consensus 56 ~l~~~~iv-~~~~~~~~~~~~~lv~e~~~~g~--L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~N 132 (285)
T cd05631 56 KVNSRFVV-SLAYAYETKDALCLVLTIMNGGD--LKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPEN 132 (285)
T ss_pred hcCCCcEE-EEEEEEccCCeEEEEEEecCCCc--HHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHH
Confidence 35788755 5443 45667899999999998 65443 2457889999999999999999999999999999
Q ss_pred EEEecCCCEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchh
Q psy3880 77 ILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQ 156 (408)
Q Consensus 77 ILl~~~~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~ 156 (408)
||+++++.+||+|||++.............||+.|+|||++.. ..|+.++|+||+||++|+|++|+.||.+.+.
T Consensus 133 ill~~~~~~kl~Dfg~~~~~~~~~~~~~~~g~~~y~aPE~~~~------~~~~~~~DvwslGvil~el~~g~~pf~~~~~ 206 (285)
T cd05631 133 ILLDDRGHIRISDLGLAVQIPEGETVRGRVGTVGYMAPEVINN------EKYTFSPDWWGLGCLIYEMIQGQSPFRKRKE 206 (285)
T ss_pred EEECCCCCEEEeeCCCcEEcCCCCeecCCCCCCCccCHhhhcC------CCCCcccCchhHHHHHHHHHhCCCCCCCCCc
Confidence 9999999999999999987655444456789999999999864 3467788888888888888888888855322
Q ss_pred HHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhc
Q psy3880 157 MVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEG 236 (408)
Q Consensus 157 ~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~ 236 (408)
... .......+...
T Consensus 207 ~~~------------------------------------------------------------------~~~~~~~~~~~ 220 (285)
T cd05631 207 RVK------------------------------------------------------------------REEVDRRVKED 220 (285)
T ss_pred chh------------------------------------------------------------------HHHHHHHhhcc
Confidence 110 00111122222
Q ss_pred CCCCCCCcCCCCCccHHHHHHHhcccCCCCCCC-----HHHHHcCCCCCCC
Q psy3880 237 KYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYS-----VKEALNHSFFHPK 282 (408)
Q Consensus 237 ~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~t-----a~e~L~Hpwf~~~ 282 (408)
... ....+|+++++||++||+.||.+|+| ++++++||||...
T Consensus 221 ~~~----~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~~~~~ 267 (285)
T cd05631 221 QEE----YSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPIFKNI 267 (285)
T ss_pred ccc----CCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHhhcCC
Confidence 222 22467999999999999999999997 8999999999764
No 53
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=1e-35 Score=287.16 Aligned_cols=192 Identities=39% Similarity=0.680 Sum_probs=149.9
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC-----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEE
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN-----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENIL 78 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~-----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NIL 78 (408)
.+.|+|++ .+.+ ++++..|+||||+.+|. |.+++. ++..++.++.||+.||+|||++||+||||||+|||
T Consensus 57 ~l~hp~iv-~~~~~~~~~~~~~lv~e~~~~~~--L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIl 133 (291)
T cd05612 57 EVSHPFII-RLFWTEHDQRFLYMLMEYVPGGE--LFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENIL 133 (291)
T ss_pred hCCCCcHh-hhHhhhccCCeEEEEEeCCCCCC--HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeE
Confidence 46788755 5554 34566789999999998 877763 45788999999999999999999999999999999
Q ss_pred EecCCCEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHH
Q psy3880 79 LDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMV 158 (408)
Q Consensus 79 l~~~~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~ 158 (408)
++.++.+||+|||++...... ....+||+.|+|||++.. ..++.++||||+||++|+|++|..||.+.+
T Consensus 134 i~~~~~~kl~Dfg~~~~~~~~--~~~~~gt~~y~aPE~~~~------~~~~~~~DiwSlG~il~~l~~g~~pf~~~~--- 202 (291)
T cd05612 134 LDKEGHIKLTDFGFAKKLRDR--TWTLCGTPEYLAPEVIQS------KGHNKAVDWWALGILIYEMLVGYPPFFDDN--- 202 (291)
T ss_pred ECCCCCEEEEecCcchhccCC--cccccCChhhcCHHHHcC------CCCCchhhHHHHHHHHHHHHhCCCCCCCCC---
Confidence 999999999999999876432 234679999999999864 345667777777777777777776664433
Q ss_pred HHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCC
Q psy3880 159 MLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKY 238 (408)
Q Consensus 159 ~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~ 238 (408)
.......+..+..
T Consensus 203 -------------------------------------------------------------------~~~~~~~i~~~~~ 215 (291)
T cd05612 203 -------------------------------------------------------------------PFGIYEKILAGKL 215 (291)
T ss_pred -------------------------------------------------------------------HHHHHHHHHhCCc
Confidence 2333444444444
Q ss_pred CCCCCcCCCCCccHHHHHHHhcccCCCCCCC-----HHHHHcCCCCCCC
Q psy3880 239 SFSSPEWNDISEDPKDLIRKLLIVTPEDRYS-----VKEALNHSFFHPK 282 (408)
Q Consensus 239 ~f~~~~~~~iS~~~~dLI~klL~~dP~~R~t-----a~e~L~Hpwf~~~ 282 (408)
.++. .+++++++||++||+.||.+|++ ++|+++||||...
T Consensus 216 ~~~~----~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~ 260 (291)
T cd05612 216 EFPR----HLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFKSV 260 (291)
T ss_pred CCCc----cCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCccccCC
Confidence 4432 46889999999999999999995 9999999999753
No 54
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=2.3e-35 Score=301.49 Aligned_cols=226 Identities=25% Similarity=0.405 Sum_probs=158.3
Q ss_pred ccccCCcEEEEec----------cCCcHHHHHHHHHhhchhhHHhh------hCCHHHHHHHHHHHHHHHHHHHHCCCee
Q psy3880 6 MVAHSRVVVRVKE----------EGDDLKHLAAQVVDKGEAAVQDI------INSNPALRYIMRQLFEALEHVHNHSVVH 69 (408)
Q Consensus 6 ~~~~~~~i~~~~~----------~~~~~~~lv~e~~~~g~~~l~~~------~~~~~~~r~i~~qil~aL~~LH~~~IvH 69 (408)
.+.|+|+| .+.+ +.....++||||+.++...+... ..+...++.++.||+.||+|||++||+|
T Consensus 115 ~l~h~niv-~l~~~~~~~~~~~~~~~~~l~lvmE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiH 193 (440)
T PTZ00036 115 NLNHINII-FLKDYYYTECFKKNEKNIFLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICH 193 (440)
T ss_pred hcCCCCCc-ceeeeEeecccccCCCceEEEEEEecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEec
Confidence 46799866 4322 11123568999998764222211 1234788999999999999999999999
Q ss_pred ccCCCCcEEEecCC-CEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCC
Q psy3880 70 RDLKPENILLDDQM-NVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGC 148 (408)
Q Consensus 70 RDLKp~NILl~~~~-~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~ 148 (408)
|||||+|||++.++ .+||+|||+|+.+.........+||+.|+|||++.+ ...|+.++|+||+||++|+|++|.
T Consensus 194 rDLKp~NILl~~~~~~vkL~DFGla~~~~~~~~~~~~~~t~~y~aPE~~~~-----~~~~~~~~DiwSlGvil~elltG~ 268 (440)
T PTZ00036 194 RDLKPQNLLIDPNTHTLKLCDFGSAKNLLAGQRSVSYICSRFYRAPELMLG-----ATNYTTHIDLWSLGCIIAEMILGY 268 (440)
T ss_pred CCcCHHHEEEcCCCCceeeeccccchhccCCCCcccCCCCcCccCHHHhcC-----CCCCCcHHHHHHHHHHHHHHHhCC
Confidence 99999999998654 799999999987765555556789999999999864 245889999999999999999999
Q ss_pred CCCCCchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHH
Q psy3880 149 PPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMV 228 (408)
Q Consensus 149 ~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~ 228 (408)
+||.+.+..+.+.++......+. .+.+.... ..| .++ ..++.. ...
T Consensus 269 ~pf~~~~~~~~~~~i~~~~~~p~------------~~~~~~~~----~~~---~~~------------~~~~~~---~~~ 314 (440)
T PTZ00036 269 PIFSGQSSVDQLVRIIQVLGTPT------------EDQLKEMN----PNY---ADI------------KFPDVK---PKD 314 (440)
T ss_pred CCCCCCChHHHHHHHHHHhCCCC------------HHHHHHhc----hhh---hcc------------cCCccC---chh
Confidence 99999887777777655322211 11110000 000 000 000000 000
Q ss_pred HHHHHHhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q psy3880 229 MLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPK 282 (408)
Q Consensus 229 ~~~~i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~ 282 (408)
+.. .++ ...|+++++||++||++||.+|+|+.|+|+||||...
T Consensus 315 -l~~------~~p----~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~~ 357 (440)
T PTZ00036 315 -LKK------VFP----KGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDDL 357 (440)
T ss_pred -HHH------Hhc----cCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHhh
Confidence 000 011 2468899999999999999999999999999999753
No 55
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=1.4e-35 Score=290.56 Aligned_cols=192 Identities=29% Similarity=0.549 Sum_probs=146.3
Q ss_pred ccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC-----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEe
Q psy3880 8 AHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN-----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLD 80 (408)
Q Consensus 8 ~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~-----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl~ 80 (408)
.|+++ +.+.+ +..+..|+||||+.||. |.+.+. ++..+..++.|++.||+|||++||+||||||+|||++
T Consensus 54 ~h~~i-v~~~~~~~~~~~~~iv~Ey~~~g~--L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~ 130 (320)
T cd05590 54 NHPFL-TQLYCCFQTPDRLFFVMEFVNGGD--LMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLD 130 (320)
T ss_pred CCCch-hceeeEEEcCCEEEEEEcCCCCch--HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEEC
Confidence 57764 45554 45567899999999998 776653 4578899999999999999999999999999999999
Q ss_pred cCCCEEEeccccchhccc-CcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHHH
Q psy3880 81 DQMNVKLTDFGFARVLKK-GEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVM 159 (408)
Q Consensus 81 ~~~~iKl~DFGla~~~~~-~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~~ 159 (408)
.++.+||+|||++..... .......+||+.|+|||++.. ..++.++|+||+||++|+|++|..||.
T Consensus 131 ~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~el~~g~~Pf~------- 197 (320)
T cd05590 131 HEGHCKLADFGMCKEGIFNGKTTSTFCGTPDYIAPEILQE------MLYGPSVDWWAMGVLLYEMLCGHAPFE------- 197 (320)
T ss_pred CCCcEEEeeCCCCeecCcCCCcccccccCccccCHHHHcC------CCCCCccchhhhHHHHHHHhhCCCCCC-------
Confidence 999999999999875432 223345689999999998853 234555666666666666666655554
Q ss_pred HHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCCC
Q psy3880 160 LRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYS 239 (408)
Q Consensus 160 ~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~~ 239 (408)
..+...+...+..+...
T Consensus 198 ---------------------------------------------------------------~~~~~~~~~~i~~~~~~ 214 (320)
T cd05590 198 ---------------------------------------------------------------AENEDDLFEAILNDEVV 214 (320)
T ss_pred ---------------------------------------------------------------CCCHHHHHHHHhcCCCC
Confidence 33344444455544443
Q ss_pred CCCCcCCCCCccHHHHHHHhcccCCCCCCCH------HHHHcCCCCCCC
Q psy3880 240 FSSPEWNDISEDPKDLIRKLLIVTPEDRYSV------KEALNHSFFHPK 282 (408)
Q Consensus 240 f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta------~e~L~Hpwf~~~ 282 (408)
++ ..+++++++||++||+.||++|+|+ +++++||||...
T Consensus 215 ~~----~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h~~f~~~ 259 (320)
T cd05590 215 YP----TWLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHPFFKEL 259 (320)
T ss_pred CC----CCCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcCCCcCCC
Confidence 32 2478999999999999999999998 999999999764
No 56
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=2.1e-35 Score=289.39 Aligned_cols=194 Identities=27% Similarity=0.555 Sum_probs=150.2
Q ss_pred cccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC-----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEE
Q psy3880 7 VAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN-----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILL 79 (408)
Q Consensus 7 ~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~-----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl 79 (408)
+.|+++|+.+.. ...+..|+||||+.||+ |.+.+. +++.++.++.||+.||+|||++||+||||||+|||+
T Consensus 57 ~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~--L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill 134 (324)
T cd05587 57 PGKPPFLTQLHSCFQTMDRLYFVMEYVNGGD--LMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVML 134 (324)
T ss_pred cCCCCceeeeEEEEEcCCEEEEEEcCCCCCc--HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEE
Confidence 457887877764 45567899999999998 777663 458889999999999999999999999999999999
Q ss_pred ecCCCEEEeccccchhcc-cCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHH
Q psy3880 80 DDQMNVKLTDFGFARVLK-KGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMV 158 (408)
Q Consensus 80 ~~~~~iKl~DFGla~~~~-~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~ 158 (408)
+.++.+||+|||++.... ........+||+.|+|||++.+ ..++.++|+||+||++|+|++|+.||.+.
T Consensus 135 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslGvil~elltG~~pf~~~---- 204 (324)
T cd05587 135 DAEGHIKIADFGMCKENIFGGKTTRTFCGTPDYIAPEIIAY------QPYGKSVDWWAFGVLLYEMLAGQPPFDGE---- 204 (324)
T ss_pred cCCCCEEEeecCcceecCCCCCceeeecCCccccChhhhcC------CCCCcccchhhhHHHHHHHHhCCCCCCCC----
Confidence 999999999999987532 2223345689999999999864 23556666666666666666666666443
Q ss_pred HHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCC
Q psy3880 159 MLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKY 238 (408)
Q Consensus 159 ~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~ 238 (408)
+..+....+.....
T Consensus 205 ------------------------------------------------------------------~~~~~~~~i~~~~~ 218 (324)
T cd05587 205 ------------------------------------------------------------------DEDELFQSIMEHNV 218 (324)
T ss_pred ------------------------------------------------------------------CHHHHHHHHHcCCC
Confidence 33334444544444
Q ss_pred CCCCCcCCCCCccHHHHHHHhcccCCCCCCCH-----HHHHcCCCCCCC
Q psy3880 239 SFSSPEWNDISEDPKDLIRKLLIVTPEDRYSV-----KEALNHSFFHPK 282 (408)
Q Consensus 239 ~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta-----~e~L~Hpwf~~~ 282 (408)
.++ ..+|+++++||++||..||.+|+++ +++++||||...
T Consensus 219 ~~~----~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~hp~~~~~ 263 (324)
T cd05587 219 SYP----KSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREHAFFRRI 263 (324)
T ss_pred CCC----CCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence 433 3579999999999999999999986 899999999764
No 57
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=3.8e-35 Score=294.27 Aligned_cols=242 Identities=26% Similarity=0.399 Sum_probs=153.5
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC-----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEE
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN-----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENIL 78 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~-----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NIL 78 (408)
.+.|++ |+++.. ++++..|+||||+.||+ |.+.+. ++..++.++.||+.||+|||++||+||||||+|||
T Consensus 57 ~l~h~~-iv~l~~~~~~~~~~~lv~E~~~gg~--L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nil 133 (381)
T cd05626 57 EADNEW-VVKLYYSFQDKDNLYFVMDYIPGGD--MMSLLIRMEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNIL 133 (381)
T ss_pred hcCCCC-eeeeEEEEecCCEEEEEEecCCCCc--HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEE
Confidence 356776 556554 45667899999999998 877763 45788999999999999999999999999999999
Q ss_pred EecCCCEEEeccccchhcccCcccccC-----CCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCC
Q psy3880 79 LDDQMNVKLTDFGFARVLKKGEKLMDL-----CGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH 153 (408)
Q Consensus 79 l~~~~~iKl~DFGla~~~~~~~~~~~~-----~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~ 153 (408)
++.++.+||+|||++..+......... ..+.. +.|+.+....- ....+.. .-.+-......
T Consensus 134 i~~~~~~kL~DFGl~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~---------~~~~~~~~~~~-- 199 (381)
T cd05626 134 IDLDGHIKLTDFGLCTGFRWTHNSKYYQKGSHIRQDS-MEPSDLWDDVS--NCRCGDR---------LKTLEQRATKQ-- 199 (381)
T ss_pred ECCCCCEEEeeCcCCcccccccccccccccccccccc-cCccccccccc--ccccccc---------cchhhcccccc--
Confidence 999999999999998654321100000 00000 01111000000 0000000 00000000000
Q ss_pred chhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHH
Q psy3880 154 RKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI 233 (408)
Q Consensus 154 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i 233 (408)
.. .-......++..|++||.+... .|+.++|+||+||++|+|++|.+||...+..+....+
T Consensus 200 ------------~~-~~~~~~~~gt~~Y~aPE~~~~~------~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~i 260 (381)
T cd05626 200 ------------HQ-RCLAHSLVGTPNYIAPEVLLRK------GYTQLCDWWSVGVILFEMLVGQPPFLAPTPTETQLKV 260 (381)
T ss_pred ------------cc-ccccccccCCccccCHHHHcCC------CCCCccceeehhhHHHHHHhCCCCCcCCCHHHHHHHH
Confidence 00 0000011234567777776432 3566788888888888888888888777666666666
Q ss_pred HhcCCCCCCCcCCCCCccHHHHHHHhcccCCC--CCCCHHHHHcCCCCCCCC
Q psy3880 234 MEGKYSFSSPEWNDISEDPKDLIRKLLIVTPE--DRYSVKEALNHSFFHPKL 283 (408)
Q Consensus 234 ~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~--~R~ta~e~L~Hpwf~~~~ 283 (408)
.........+.+..+|++++|||.+||..+++ .|+|++|+++||||+...
T Consensus 261 ~~~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~hp~f~~~~ 312 (381)
T cd05626 261 INWENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKAHPFFSEVD 312 (381)
T ss_pred HccccccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCcccCCCC
Confidence 65444444455667899999999998766554 499999999999998643
No 58
>KOG0580|consensus
Probab=100.00 E-value=2.9e-36 Score=272.36 Aligned_cols=193 Identities=31% Similarity=0.551 Sum_probs=158.0
Q ss_pred cccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC-------CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCC
Q psy3880 5 EMVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN-------SNPALRYIMRQLFEALEHVHNHSVVHRDLKPE 75 (408)
Q Consensus 5 ~~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~-------~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~ 75 (408)
+-|-|||++ +++. -++...||++||..+|| ++..+. ++..+..|++|++.||.|||.++||||||||+
T Consensus 77 s~L~hpnil-rlY~~fhd~~riyLilEya~~ge--l~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpe 153 (281)
T KOG0580|consen 77 SHLRHPNIL-RLYGYFHDSKRIYLILEYAPRGE--LYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPE 153 (281)
T ss_pred cccCCccHH-hhhhheeccceeEEEEEecCCch--HHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHH
Confidence 457899866 5554 34456799999999999 888776 33678899999999999999999999999999
Q ss_pred cEEEecCCCEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCch
Q psy3880 76 NILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRK 155 (408)
Q Consensus 76 NILl~~~~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~ 155 (408)
|+|++..+.+|++|||-+..-. ...-.+.|||.-|++||...+ ..++.
T Consensus 154 nlLlg~~~~lkiAdfGwsV~~p-~~kR~tlcgt~dyl~pEmv~~------~~hd~------------------------- 201 (281)
T KOG0580|consen 154 NLLLGSAGELKIADFGWSVHAP-SNKRKTLCGTLDYLPPEMVEG------RGHDK------------------------- 201 (281)
T ss_pred HhccCCCCCeeccCCCceeecC-CCCceeeecccccCCHhhcCC------CCccc-------------------------
Confidence 9999999999999999886543 445578999999999998754 33444
Q ss_pred hHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHh
Q psy3880 156 QMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIME 235 (408)
Q Consensus 156 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~ 235 (408)
.+|+|++||++|++|.|.|||...+..++++.|.+
T Consensus 202 ---------------------------------------------~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k 236 (281)
T KOG0580|consen 202 ---------------------------------------------FVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRK 236 (281)
T ss_pred ---------------------------------------------hhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHH
Confidence 45555556666666666666666666778888888
Q ss_pred cCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCC
Q psy3880 236 GKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHP 281 (408)
Q Consensus 236 ~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~ 281 (408)
..+.++ ..+|.+|+|||.+||.++|.+|++..|++.|||+..
T Consensus 237 ~~~~~p----~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpwI~a 278 (281)
T KOG0580|consen 237 VDLKFP----STISGGAADLISRLLVKNPIERLALTEVMDHPWIVA 278 (281)
T ss_pred ccccCC----cccChhHHHHHHHHhccCccccccHHHHhhhHHHHh
Confidence 887776 479999999999999999999999999999999854
No 59
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=1.7e-35 Score=294.37 Aligned_cols=234 Identities=28% Similarity=0.450 Sum_probs=152.1
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC-----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEE
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN-----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENIL 78 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~-----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NIL 78 (408)
.+.|++++ .+.+ ++++..|+||||+.||+ |.+.+. ++..++.++.|++.||+|||++||+||||||+|||
T Consensus 57 ~l~~~~iv-~~~~~~~~~~~~~lv~E~~~gg~--L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIl 133 (360)
T cd05627 57 EADGAWVV-KMFYSFQDKRNLYLIMEFLPGGD--MMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLL 133 (360)
T ss_pred hCCCCCEe-eEEEEEEcCCEEEEEEeCCCCcc--HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEE
Confidence 45788755 5443 45567899999999998 887764 45789999999999999999999999999999999
Q ss_pred EecCCCEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHH
Q psy3880 79 LDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMV 158 (408)
Q Consensus 79 l~~~~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~ 158 (408)
++.++.+||+|||++..+....... .........|........ ......+.|.
T Consensus 134 i~~~~~vkL~DfG~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~----~~~~~~~~~~---------------------- 186 (360)
T cd05627 134 LDAKGHVKLSDFGLCTGLKKAHRTE-FYRNLTHNPPSDFSFQNM----NSKRKAETWK---------------------- 186 (360)
T ss_pred ECCCCCEEEeeccCCcccccccccc-cccccccCCccccccccc----cccccccccc----------------------
Confidence 9999999999999987553221100 000000000000000000 0000000000
Q ss_pred HHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCC
Q psy3880 159 MLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKY 238 (408)
Q Consensus 159 ~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~ 238 (408)
...........++..|+|||++... +|+.++|+||+||++|+|++|.+||...+.......+.....
T Consensus 187 -------~~~~~~~~~~~gt~~Y~APE~~~~~------~~~~~~DiwSlGvilyel~tG~~Pf~~~~~~~~~~~i~~~~~ 253 (360)
T cd05627 187 -------KNRRQLAYSTVGTPDYIAPEVFMQT------GYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYRKVMNWKE 253 (360)
T ss_pred -------ccccccccccCCCccccCHHHHcCC------CCCCcceeccccceeeecccCCCCCCCCCHHHHHHHHHcCCC
Confidence 0000000011233456666665432 356678888888888888888888887777777777765443
Q ss_pred CCCCCcCCCCCccHHHHHHHhcccCCCCCC---CHHHHHcCCCCCCCC
Q psy3880 239 SFSSPEWNDISEDPKDLIRKLLIVTPEDRY---SVKEALNHSFFHPKL 283 (408)
Q Consensus 239 ~f~~~~~~~iS~~~~dLI~klL~~dP~~R~---ta~e~L~Hpwf~~~~ 283 (408)
....+....+|++++|||.+|+. ||.+|+ +++|+++||||....
T Consensus 254 ~~~~p~~~~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~hp~f~~~~ 300 (360)
T cd05627 254 TLVFPPEVPISEKAKDLILRFCT-DSENRIGSNGVEEIKSHPFFEGVD 300 (360)
T ss_pred ceecCCCCCCCHHHHHHHHHhcc-ChhhcCCCCCHHHHhcCCCCCCCC
Confidence 33333344589999999999874 999998 489999999998753
No 60
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=1.4e-35 Score=291.23 Aligned_cols=194 Identities=34% Similarity=0.579 Sum_probs=152.2
Q ss_pred ccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC-----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEe
Q psy3880 8 AHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN-----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLD 80 (408)
Q Consensus 8 ~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~-----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl~ 80 (408)
.|++ |+.+.. +.++..|+||||+.+|. |.+.+. ++..++.++.||+.||+|||++||+||||||+|||++
T Consensus 54 ~~p~-i~~~~~~~~~~~~~~lv~e~~~~g~--L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~ 130 (330)
T cd05586 54 ESPF-IVGLKFSFQTDSDLYLVTDYMSGGE--LFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLD 130 (330)
T ss_pred CCCc-CcceEEEEecCCeEEEEEcCCCCCh--HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEEC
Confidence 5666 445554 45667899999999998 776653 4578999999999999999999999999999999999
Q ss_pred cCCCEEEeccccchhccc-CcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHHH
Q psy3880 81 DQMNVKLTDFGFARVLKK-GEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVM 159 (408)
Q Consensus 81 ~~~~iKl~DFGla~~~~~-~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~~ 159 (408)
.++.+||+|||++..... .......+||+.|+|||++... ..+
T Consensus 131 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~------------------------------- 174 (330)
T cd05586 131 ATGHIALCDFGLSKANLTDNKTTNTFCGTTEYLAPEVLLDE-----KGY------------------------------- 174 (330)
T ss_pred CCCCEEEecCCcCcCCCCCCCCccCccCCccccCHHHHcCC-----CCC-------------------------------
Confidence 999999999999875432 2233457899999999988531 112
Q ss_pred HHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCCC
Q psy3880 160 LRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYS 239 (408)
Q Consensus 160 ~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~~ 239 (408)
+.++|+||+||++|+|++|..||...+..++...+..+...
T Consensus 175 ---------------------------------------~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~ 215 (330)
T cd05586 175 ---------------------------------------TKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKVR 215 (330)
T ss_pred ---------------------------------------CCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcCCCC
Confidence 33566777777777777777777666666666777766665
Q ss_pred CCCCcCCCCCccHHHHHHHhcccCCCCCC----CHHHHHcCCCCCCC
Q psy3880 240 FSSPEWNDISEDPKDLIRKLLIVTPEDRY----SVKEALNHSFFHPK 282 (408)
Q Consensus 240 f~~~~~~~iS~~~~dLI~klL~~dP~~R~----ta~e~L~Hpwf~~~ 282 (408)
++. ..+++++++||++||..||++|| +++|+++||||...
T Consensus 216 ~~~---~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h~~~~~~ 259 (330)
T cd05586 216 FPK---NVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEHPFFADI 259 (330)
T ss_pred CCC---ccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcCccccCC
Confidence 543 24789999999999999999998 79999999999753
No 61
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=4e-35 Score=291.98 Aligned_cols=237 Identities=23% Similarity=0.388 Sum_probs=164.8
Q ss_pred ccccCCcEEEEecc--------CCcHHHHHHHHHhhchhhHHhhhCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcE
Q psy3880 6 MVAHSRVVVRVKEE--------GDDLKHLAAQVVDKGEAAVQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENI 77 (408)
Q Consensus 6 ~~~~~~~i~~~~~~--------~~~~~~lv~e~~~~g~~~l~~~~~~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NI 77 (408)
.+.|+|++ .+... .....|+||||+.++.......-.+...+..++.|++.||+|||++||+||||||+||
T Consensus 79 ~l~h~~ii-~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NI 157 (364)
T cd07875 79 CVNHKNII-GLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 157 (364)
T ss_pred hcCCCCcc-ccceeecccccccccCeEEEEEeCCCCCHHHHHHhcCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHE
Confidence 46788865 44321 1123589999998764222222235678899999999999999999999999999999
Q ss_pred EEecCCCEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhH
Q psy3880 78 LLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 157 (408)
Q Consensus 78 Ll~~~~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~ 157 (408)
|++.++.+||+|||+++............||+.|+|||++.+ ..++.++|+||+||++|+|++|+.||.+.+..
T Consensus 158 ll~~~~~~kL~DfG~a~~~~~~~~~~~~~~t~~y~aPE~~~~------~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~ 231 (364)
T cd07875 158 VVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG------MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHI 231 (364)
T ss_pred EECCCCcEEEEeCCCccccCCCCcccCCcccCCcCCHHHHhC------CCCCchhhHHhHHHHHHHHHhCCCCCCCCCHH
Confidence 999999999999999987655444455789999999999864 45788999999999999999999999998888
Q ss_pred HHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcC
Q psy3880 158 VMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 237 (408)
Q Consensus 158 ~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~ 237 (408)
....++......+ .|+....- . ..........+.+.......... ...
T Consensus 232 ~~~~~~~~~~~~~------------~~~~~~~~---------------~--~~~~~~~~~~~~~~~~~~~~~~~---~~~ 279 (364)
T cd07875 232 DQWNKVIEQLGTP------------CPEFMKKL---------------Q--PTVRTYVENRPKYAGYSFEKLFP---DVL 279 (364)
T ss_pred HHHHHHHHhcCCC------------CHHHHHhh---------------h--HHHHHHHhhCCCcCCCChHhhCc---ccc
Confidence 8777776532221 11211100 0 00001111222222221111111 011
Q ss_pred CCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCC
Q psy3880 238 YSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHP 281 (408)
Q Consensus 238 ~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~ 281 (408)
+......+...+.+++|||.+||+.||.+|||++|+|+||||..
T Consensus 280 ~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~~~~ 323 (364)
T cd07875 280 FPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINV 323 (364)
T ss_pred ccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCccccc
Confidence 11122223345778999999999999999999999999999975
No 62
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=9.3e-35 Score=288.26 Aligned_cols=238 Identities=24% Similarity=0.370 Sum_probs=161.4
Q ss_pred ccccCCcEEEEecc--------CCcHHHHHHHHHhhchhhHHhhhCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcE
Q psy3880 6 MVAHSRVVVRVKEE--------GDDLKHLAAQVVDKGEAAVQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENI 77 (408)
Q Consensus 6 ~~~~~~~i~~~~~~--------~~~~~~lv~e~~~~g~~~l~~~~~~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NI 77 (408)
.+.|+|+| .+.+. .....|+||||+.++.........+...++.++.|++.||+|||++||+||||||+||
T Consensus 72 ~l~h~niv-~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Ni 150 (355)
T cd07874 72 CVNHKNII-SLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 150 (355)
T ss_pred HhCCCchh-ceeeeeeccccccccceeEEEhhhhcccHHHHHhhcCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHE
Confidence 46799865 44431 1123589999998764222222245678899999999999999999999999999999
Q ss_pred EEecCCCEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhH
Q psy3880 78 LLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 157 (408)
Q Consensus 78 Ll~~~~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~ 157 (408)
|++.++.+||+|||+++............||+.|+|||++.+ ..++.++|+||+||++|+|++|..||.+.+..
T Consensus 151 ll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~------~~~~~~~DiwslG~il~el~~g~~pf~~~~~~ 224 (355)
T cd07874 151 VVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG------MGYKENVDIWSVGCIMGEMVRHKILFPGRDYI 224 (355)
T ss_pred EECCCCCEEEeeCcccccCCCccccCCccccCCccCHHHHcC------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 999999999999999987655444455789999999999864 35788999999999999999999999988876
Q ss_pred HHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcC
Q psy3880 158 VMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 237 (408)
Q Consensus 158 ~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~ 237 (408)
.....+....... .||...... -.+ -..+...+.+....... ......
T Consensus 225 ~~~~~~~~~~~~~------------~~~~~~~~~---------------~~~--~~~~~~~~~~~~~~~~~---~~~~~~ 272 (355)
T cd07874 225 DQWNKVIEQLGTP------------CPEFMKKLQ---------------PTV--RNYVENRPKYAGLTFPK---LFPDSL 272 (355)
T ss_pred HHHHHHHHHhCCC------------CHHHHHhhc---------------HHH--HHHHhcCCccccccchh---hccccc
Confidence 6666655432211 111110000 000 00000011110000000 000011
Q ss_pred CCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q psy3880 238 YSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPK 282 (408)
Q Consensus 238 ~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~ 282 (408)
+..........+.++++||.+||+.||++|||+.|+|+||||+..
T Consensus 273 ~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp~~~~~ 317 (355)
T cd07874 273 FPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPYINVW 317 (355)
T ss_pred cccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCcchhcc
Confidence 111112223457789999999999999999999999999999754
No 63
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=2.3e-35 Score=289.26 Aligned_cols=193 Identities=33% Similarity=0.596 Sum_probs=145.0
Q ss_pred cccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC-----CHHHHHHHHHHHHHHHHHHHH-CCCeeccCCCCcEE
Q psy3880 7 VAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN-----SNPALRYIMRQLFEALEHVHN-HSVVHRDLKPENIL 78 (408)
Q Consensus 7 ~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~-----~~~~~r~i~~qil~aL~~LH~-~~IvHRDLKp~NIL 78 (408)
+.|++++ .+.. +.++..|+||||+.||. |.+.+. ++.+++.++.||+.||+|||+ +||+||||||+|||
T Consensus 52 ~~hp~i~-~~~~~~~~~~~~~lv~E~~~~~~--L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIl 128 (325)
T cd05594 52 SRHPFLT-ALKYSFQTHDRLCFVMEYANGGE--LFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLM 128 (325)
T ss_pred CCCCCCC-ceEEEEEcCCEEEEEEeCCCCCc--HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEE
Confidence 5688755 4433 55667899999999998 776653 457899999999999999997 89999999999999
Q ss_pred EecCCCEEEeccccchhcc-cCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhH
Q psy3880 79 LDDQMNVKLTDFGFARVLK-KGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 157 (408)
Q Consensus 79 l~~~~~iKl~DFGla~~~~-~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~ 157 (408)
++.++.+||+|||++.... ........+||+.|+|||++.. ..++.++|+||+||++|+|++
T Consensus 129 l~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~el~t----------- 191 (325)
T cd05594 129 LDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLED------NDYGRAVDWWGLGVVMYEMMC----------- 191 (325)
T ss_pred ECCCCCEEEecCCCCeecCCCCcccccccCCcccCCHHHHcc------CCCCCccccccccceeeeecc-----------
Confidence 9999999999999987533 2233345689999999998853 234454555555555555544
Q ss_pred HHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcC
Q psy3880 158 VMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 237 (408)
Q Consensus 158 ~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~ 237 (408)
|.+||...+.......+....
T Consensus 192 -----------------------------------------------------------G~~Pf~~~~~~~~~~~i~~~~ 212 (325)
T cd05594 192 -----------------------------------------------------------GRLPFYNQDHEKLFELILMEE 212 (325)
T ss_pred -----------------------------------------------------------CCCCCCCCCHHHHHHHHhcCC
Confidence 445554444444444454444
Q ss_pred CCCCCCcCCCCCccHHHHHHHhcccCCCCCC-----CHHHHHcCCCCCCC
Q psy3880 238 YSFSSPEWNDISEDPKDLIRKLLIVTPEDRY-----SVKEALNHSFFHPK 282 (408)
Q Consensus 238 ~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~-----ta~e~L~Hpwf~~~ 282 (408)
..++ ..+++++++||++||+.||++|+ |+.++|+||||...
T Consensus 213 ~~~p----~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~ 258 (325)
T cd05594 213 IRFP----RTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKFFAGI 258 (325)
T ss_pred CCCC----CCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcCCCcCCC
Confidence 4443 25789999999999999999997 89999999999864
No 64
>KOG0586|consensus
Probab=100.00 E-value=4.8e-36 Score=301.36 Aligned_cols=195 Identities=33% Similarity=0.613 Sum_probs=171.4
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhCC-----HHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEE
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIINS-----NPALRYIMRQLFEALEHVHNHSVVHRDLKPENIL 78 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~~-----~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NIL 78 (408)
+|.|||+| +++. +.....|+||||+.+|| +++++.. +.+++.++.|++.|++|||+++|||||||++|||
T Consensus 111 ~l~HPnIv-kl~~v~~t~~~lylV~eya~~ge--~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNil 187 (596)
T KOG0586|consen 111 SLNHPNIV-KLFSVIETEATLYLVMEYASGGE--LFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENIL 187 (596)
T ss_pred hcCCccee-eeeeeeeecceeEEEEEeccCch--hHHHHHhcccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhcc
Confidence 68999855 5554 55678999999999999 9999853 4899999999999999999999999999999999
Q ss_pred EecCCCEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHH
Q psy3880 79 LDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMV 158 (408)
Q Consensus 79 l~~~~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~ 158 (408)
|+.+.++||+|||++..+..+..+.+.||++.|.|||++.+.. |
T Consensus 188 L~~~mnikIaDfgfS~~~~~~~~lqt~cgsppyAaPEl~~g~~------y------------------------------ 231 (596)
T KOG0586|consen 188 LDENMNIKIADFGFSTFFDYGLMLQTFCGSPPYAAPELFNGKK------Y------------------------------ 231 (596)
T ss_pred cccccceeeeccccceeecccccccccCCCCCccChHhhcCcc------c------------------------------
Confidence 9999999999999999999888888999999999999986421 1
Q ss_pred HHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCC
Q psy3880 159 MLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKY 238 (408)
Q Consensus 159 ~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~ 238 (408)
-|+++|+||+||++|.|++|..||.+.+-.++-...+.++|
T Consensus 232 ---------------------------------------~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~gk~ 272 (596)
T KOG0586|consen 232 ---------------------------------------DGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRGKY 272 (596)
T ss_pred ---------------------------------------CCcceehhhhhhhheeeeecccccCCcccccccchheeeee
Confidence 14478899999999999999999988887777778888888
Q ss_pred CCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q psy3880 239 SFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPK 282 (408)
Q Consensus 239 ~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~ 282 (408)
..+. .+|.++++||+++|++||.+|+++++++.|.|....
T Consensus 273 rIp~----~ms~dce~lLrk~lvl~Pskr~~~dqim~~~W~n~~ 312 (596)
T KOG0586|consen 273 RIPF----YMSCDCEDLLRKFLVLNPSKRGPCDQIMKDRWRNDL 312 (596)
T ss_pred cccc----eeechhHHHHHHhhccCccccCCHHHhhhhcccchh
Confidence 7654 479999999999999999999999999999999764
No 65
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=6e-35 Score=283.13 Aligned_cols=226 Identities=25% Similarity=0.445 Sum_probs=153.9
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC------CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcE
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN------SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENI 77 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~------~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NI 77 (408)
.+.|+|++ .+.+ ..++..++||||+.++ |.+.+. ..++++.++.||+.||+|||++||+||||||+||
T Consensus 59 ~l~h~niv-~~~~~~~~~~~~~lv~e~~~~~---l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Ni 134 (303)
T cd07869 59 GLKHANIV-LLHDIIHTKETLTLVFEYVHTD---LCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNL 134 (303)
T ss_pred hCCCCCcC-eEEEEEecCCeEEEEEECCCcC---HHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHE
Confidence 46899865 4443 4456789999999754 444442 3478999999999999999999999999999999
Q ss_pred EEecCCCEEEeccccchhccc-CcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchh
Q psy3880 78 LLDDQMNVKLTDFGFARVLKK-GEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQ 156 (408)
Q Consensus 78 Ll~~~~~iKl~DFGla~~~~~-~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~ 156 (408)
|++.++.+||+|||++..... .......+||+.|+|||++.+. ..++.++|+||+||++|+|++|..||.+...
T Consensus 135 ll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-----~~~~~~~DiwslG~il~~l~~g~~pf~~~~~ 209 (303)
T cd07869 135 LISDTGELKLADFGLARAKSVPSHTYSNEVVTLWYRPPDVLLGS-----TEYSTCLDMWGVGCIFVEMIQGVAAFPGMKD 209 (303)
T ss_pred EECCCCCEEECCCCcceeccCCCccCCCCcccCCCCChHHHcCC-----CCCCcHHHHHHHHHHHHHHHhCCCCCCCCcc
Confidence 999999999999999875432 2223446789999999998642 3578899999999999999999999987543
Q ss_pred -HHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHh
Q psy3880 157 -MVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIME 235 (408)
Q Consensus 157 -~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~ 235 (408)
...+..+...........|..... .|. + ..+-|. ...| .+ +...
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~------------~--~~~~~~----------~~~~---~~----~~~~-- 254 (303)
T cd07869 210 IQDQLERIFLVLGTPNEDTWPGVHS--LPH------------F--KPERFT----------LYSP---KN----LRQA-- 254 (303)
T ss_pred HHHHHHHHHHHhCCCChhhccchhh--ccc------------c--cccccc----------ccCC---cc----HHHH--
Confidence 233333322111111111110000 000 0 000000 0000 00 0000
Q ss_pred cCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q psy3880 236 GKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPK 282 (408)
Q Consensus 236 ~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~ 282 (408)
+. ....+++++|||++||+.||++|||++|+|+||||...
T Consensus 255 ----~~---~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f~~~ 294 (303)
T cd07869 255 ----WN---KLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEYFSDL 294 (303)
T ss_pred ----hh---ccCCChHHHHHHHHHhccCchhccCHHHHhcCcccccC
Confidence 00 01356889999999999999999999999999999764
No 66
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=2.8e-35 Score=294.34 Aligned_cols=236 Identities=26% Similarity=0.420 Sum_probs=153.5
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC-----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEE
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN-----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENIL 78 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~-----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NIL 78 (408)
.+.|++++ ++.+ ++++..|+|||||.||+ |.+.+. ++..++.++.||+.||+|||++||+||||||+|||
T Consensus 57 ~l~h~~iv-~~~~~~~~~~~~~lv~E~~~~g~--L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nil 133 (376)
T cd05598 57 EADNEWVV-KLYYSFQDKDNLYFVMDYIPGGD--MMSLLIRLGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNIL 133 (376)
T ss_pred hCCCCCcc-eEEEEEEcCCEEEEEEeCCCCCc--HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEE
Confidence 36788755 5443 45677899999999998 887763 45788999999999999999999999999999999
Q ss_pred EecCCCEEEeccccchhcccCcccccCC--CC---CcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCC
Q psy3880 79 LDDQMNVKLTDFGFARVLKKGEKLMDLC--GT---PGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH 153 (408)
Q Consensus 79 l~~~~~iKl~DFGla~~~~~~~~~~~~~--gt---~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~ 153 (408)
++.++.+||+|||+|..+.......... .. .....+..... ...+.. .+...
T Consensus 134 l~~~~~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~--------------~~~~~ 190 (376)
T cd05598 134 IDRDGHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSE---------IDRCRL--------------KPLER 190 (376)
T ss_pred ECCCCCEEEEeCCCCccccccccccccccccccccccccccccccc---------cccccc--------------cchhh
Confidence 9999999999999986432110000000 00 00000000000 000000 00000
Q ss_pred chhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHH
Q psy3880 154 RKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI 233 (408)
Q Consensus 154 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i 233 (408)
. .. ............++..|++||++... .|+.++|+||+||++|+|++|.+||.+.+..+....+
T Consensus 191 ~-------~~-~~~~~~~~~~~~gt~~y~aPE~~~~~------~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i 256 (376)
T cd05598 191 R-------RK-RQHQRCLAHSLVGTPNYIAPEVLLRT------GYTQLCDWWSVGVILYEMLVGQPPFLADTPAETQLKV 256 (376)
T ss_pred h-------hh-hhcccccccccCCCccccCHHHHcCC------CCCcceeeeeccceeeehhhCCCCCCCCCHHHHHHHH
Confidence 0 00 00000001112334456677766432 3566788888888888888888888777766666666
Q ss_pred HhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCC---CHHHHHcCCCCCCC
Q psy3880 234 MEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRY---SVKEALNHSFFHPK 282 (408)
Q Consensus 234 ~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~---ta~e~L~Hpwf~~~ 282 (408)
.........+.+..+|+++++||.+|+ .||.+|+ |+.|+++||||...
T Consensus 257 ~~~~~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h~~~~~~ 307 (376)
T cd05598 257 INWETTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKAHPFFKGI 307 (376)
T ss_pred hccCccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCCCCcCCC
Confidence 655544555556779999999999976 5999999 99999999999763
No 67
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=3.7e-35 Score=288.06 Aligned_cols=226 Identities=26% Similarity=0.412 Sum_probs=157.3
Q ss_pred ccccCCcEEEEecc-----CC--cHHHHHHHHHhhchhhHHhhhC-----CHHHHHHHHHHHHHHHHHHHHCCCeeccCC
Q psy3880 6 MVAHSRVVVRVKEE-----GD--DLKHLAAQVVDKGEAAVQDIIN-----SNPALRYIMRQLFEALEHVHNHSVVHRDLK 73 (408)
Q Consensus 6 ~~~~~~~i~~~~~~-----~~--~~~~lv~e~~~~g~~~l~~~~~-----~~~~~r~i~~qil~aL~~LH~~~IvHRDLK 73 (408)
.+.|+|++ .+.+. .. ...|+|||||.+ . |.+.+. +...++.++.||+.||.|||++||+|||||
T Consensus 55 ~l~hpniv-~~~~~~~~~~~~~~~~~~lv~e~~~~-~--L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlk 130 (338)
T cd07859 55 LLRHPDIV-EIKHIMLPPSRREFKDIYVVFELMES-D--LHQVIKANDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLK 130 (338)
T ss_pred hCCCCCEe-eecceEeccCCCCCceEEEEEecCCC-C--HHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCC
Confidence 46799854 54431 11 235899999964 4 665543 458899999999999999999999999999
Q ss_pred CCcEEEecCCCEEEeccccchhcccCc----ccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCC
Q psy3880 74 PENILLDDQMNVKLTDFGFARVLKKGE----KLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCP 149 (408)
Q Consensus 74 p~NILl~~~~~iKl~DFGla~~~~~~~----~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~ 149 (408)
|+|||++.++.+||+|||+++...... .....+||+.|+|||++... ...++.++|+||+||++|+|++|++
T Consensus 131 p~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~----~~~~~~~~DvwSlGvvl~el~tg~~ 206 (338)
T cd07859 131 PKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSF----FSKYTPAIDIWSIGCIFAEVLTGKP 206 (338)
T ss_pred HHHeEECCCCcEEEccCccccccccccCccccccCCCCCCCcCCHHHHhcc----ccccCchhHHHHHHHHHHHHHcCCC
Confidence 999999999999999999997643221 12346799999999998641 1357889999999999999999999
Q ss_pred CCCCchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHH
Q psy3880 150 PFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVM 229 (408)
Q Consensus 150 pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~ 229 (408)
||.+.+....+..+...... ..++.+..-. .......
T Consensus 207 pf~~~~~~~~~~~~~~~~~~------------~~~~~~~~i~-------------------------------~~~~~~~ 243 (338)
T cd07859 207 LFPGKNVVHQLDLITDLLGT------------PSPETISRVR-------------------------------NEKARRY 243 (338)
T ss_pred CCCCCChHHHHHHHHHHhCC------------CCHHHHHHhh-------------------------------hhhHHHH
Confidence 99887765554444321110 0111110000 0000011
Q ss_pred HHHHHhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q psy3880 230 LRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPK 282 (408)
Q Consensus 230 ~~~i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~ 282 (408)
+..+...........+..+++++++||.+||..||++|||++|+|+||||...
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~~~ 296 (338)
T cd07859 244 LSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGL 296 (338)
T ss_pred HHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCchhhhc
Confidence 11111111111112345678999999999999999999999999999999764
No 68
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=2.7e-35 Score=289.30 Aligned_cols=199 Identities=34% Similarity=0.572 Sum_probs=149.6
Q ss_pred cccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC-----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEE
Q psy3880 7 VAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN-----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILL 79 (408)
Q Consensus 7 ~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~-----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl 79 (408)
+.|+++|+.+.+ +.++..|+||||+.||+ |.+.+. ++.+++.++.||+.||+|||++||+||||||+|||+
T Consensus 61 l~~~~~i~~~~~~~~~~~~~~lv~e~~~~g~--L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili 138 (332)
T cd05614 61 VRQSPFLVTLHYAFQTEAKLHLILDYVSGGE--MFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILL 138 (332)
T ss_pred ccCCCCcccEEEEEecCCEEEEEEeCCCCCc--HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEE
Confidence 333444656654 45567789999999998 877663 458899999999999999999999999999999999
Q ss_pred ecCCCEEEeccccchhcccCc--ccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhH
Q psy3880 80 DDQMNVKLTDFGFARVLKKGE--KLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 157 (408)
Q Consensus 80 ~~~~~iKl~DFGla~~~~~~~--~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~ 157 (408)
+.++.+||+|||+++...... .....+||+.|+|||++.+. ..++.++||||+||++|+|++|..||......
T Consensus 139 ~~~~~~kl~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~~DiwslG~il~elltg~~pf~~~~~~ 213 (332)
T cd05614 139 DSEGHVVLTDFGLSKEFLSEEKERTYSFCGTIEYMAPEIIRGK-----GGHGKAVDWWSLGILIFELLTGASPFTLEGER 213 (332)
T ss_pred CCCCCEEEeeCcCCccccccCCCccccccCCccccCHHHhcCC-----CCCCCccccccchhhhhhhhcCCCCCCCCCCC
Confidence 999999999999997654322 22346899999999998642 23567788888888888888888777432100
Q ss_pred HHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcC
Q psy3880 158 VMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 237 (408)
Q Consensus 158 ~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~ 237 (408)
.........+....
T Consensus 214 ------------------------------------------------------------------~~~~~~~~~~~~~~ 227 (332)
T cd05614 214 ------------------------------------------------------------------NTQSEVSRRILKCD 227 (332)
T ss_pred ------------------------------------------------------------------CCHHHHHHHHhcCC
Confidence 01112222333333
Q ss_pred CCCCCCcCCCCCccHHHHHHHhcccCCCCCC-----CHHHHHcCCCCCCC
Q psy3880 238 YSFSSPEWNDISEDPKDLIRKLLIVTPEDRY-----SVKEALNHSFFHPK 282 (408)
Q Consensus 238 ~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~-----ta~e~L~Hpwf~~~ 282 (408)
..+ ...+++++++||.+||..||++|+ +++++++||||+..
T Consensus 228 ~~~----~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~ 273 (332)
T cd05614 228 PPF----PSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFKGL 273 (332)
T ss_pred CCC----CCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence 222 235789999999999999999999 88999999999764
No 69
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=4.6e-35 Score=287.93 Aligned_cols=195 Identities=33% Similarity=0.590 Sum_probs=148.5
Q ss_pred cccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC-----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEE
Q psy3880 7 VAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN-----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILL 79 (408)
Q Consensus 7 ~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~-----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl 79 (408)
+.|++++ ++.+ +..+..|+||||+.||. |.+.+. ++..++.++.||+.||.|||++||+||||||+|||+
T Consensus 58 ~~h~~iv-~~~~~~~~~~~~~lv~e~~~g~~--L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~ 134 (333)
T cd05600 58 TKSEWLV-KLLYAFQDDEYLYLAMEYVPGGD--FRTLLNNLGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLI 134 (333)
T ss_pred CCCCCCc-cEEEEEEcCCEEEEEEeCCCCCC--HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEE
Confidence 4588755 4443 45667899999999998 888763 457889999999999999999999999999999999
Q ss_pred ecCCCEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHHH
Q psy3880 80 DDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVM 159 (408)
Q Consensus 80 ~~~~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~~ 159 (408)
+.++.+||+|||++..... .....+||+.|+|||++.. ..++.++|+||+||++|+|++|..||.+.+
T Consensus 135 ~~~~~~kL~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~------~~~~~~~DvwslG~il~ell~g~~pf~~~~---- 202 (333)
T cd05600 135 DASGHIKLTDFGLSKGIVT--YANSVVGSPDYMAPEVLRG------KGYDFTVDYWSLGCMLYEFLCGFPPFSGST---- 202 (333)
T ss_pred CCCCCEEEEeCcCCccccc--ccCCcccCccccChhHhcC------CCCCCccceecchHHHhhhhhCCCCCCCCC----
Confidence 9999999999999976543 2345789999999999864 245566666666666666666666664433
Q ss_pred HHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCCC
Q psy3880 160 LRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYS 239 (408)
Q Consensus 160 ~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~~ 239 (408)
..+....+......
T Consensus 203 ------------------------------------------------------------------~~~~~~~i~~~~~~ 216 (333)
T cd05600 203 ------------------------------------------------------------------PNETWENLKYWKET 216 (333)
T ss_pred ------------------------------------------------------------------HHHHHHHHHhcccc
Confidence 22333333322222
Q ss_pred CCCCcC----CCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q psy3880 240 FSSPEW----NDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPK 282 (408)
Q Consensus 240 f~~~~~----~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~ 282 (408)
+..+.+ ..+|+++++||.+||..+|.+|+|++|+++||||...
T Consensus 217 ~~~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h~~~~~~ 263 (333)
T cd05600 217 LQRPVYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNHPFFKEV 263 (333)
T ss_pred ccCCCCCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhCcccCCC
Confidence 222222 2579999999999999999999999999999999763
No 70
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=7.2e-35 Score=283.94 Aligned_cols=141 Identities=31% Similarity=0.511 Sum_probs=111.1
Q ss_pred ccccCCcEEEEec----cCCcHHHHHHHHHhhchhhHHhhh--------------CCHHHHHHHHHHHHHHHHHHHHCCC
Q psy3880 6 MVAHSRVVVRVKE----EGDDLKHLAAQVVDKGEAAVQDII--------------NSNPALRYIMRQLFEALEHVHNHSV 67 (408)
Q Consensus 6 ~~~~~~~i~~~~~----~~~~~~~lv~e~~~~g~~~l~~~~--------------~~~~~~r~i~~qil~aL~~LH~~~I 67 (408)
.+.|+|+| .+.+ ..+...++||||+.++ |.+.+ .+...++.++.||+.||+|||++||
T Consensus 54 ~l~h~niv-~~~~~~~~~~~~~~~lv~e~~~~~---l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~i 129 (317)
T cd07868 54 ELKHPNVI-SLQKVFLSHADRKVWLLFDYAEHD---LWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWV 129 (317)
T ss_pred hcCCCCCc-ceeeeEecCCCcEEEEEEeccCCC---HHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence 46799865 4433 3344568999998764 43332 3457789999999999999999999
Q ss_pred eeccCCCCcEEEe----cCCCEEEeccccchhcccCc----ccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhH
Q psy3880 68 VHRDLKPENILLD----DQMNVKLTDFGFARVLKKGE----KLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGV 139 (408)
Q Consensus 68 vHRDLKp~NILl~----~~~~iKl~DFGla~~~~~~~----~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGv 139 (408)
+||||||+|||+. .++.+||+|||+|+...... .....+||+.|+|||++.+. ..|+.++|+||+||
T Consensus 130 vHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~-----~~~~~~~DiwslG~ 204 (317)
T cd07868 130 LHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGA-----RHYTKAIDIWAIGC 204 (317)
T ss_pred EcCCCCHHHEEEecCCCCcCcEEEeecCceeccCCCCccccccCCccccccccCCHHHcCC-----CCcCchhhHHHHHH
Confidence 9999999999994 55789999999998764321 22346789999999998642 35788999999999
Q ss_pred HHHHHHhCCCCCCCch
Q psy3880 140 IMYTLLVGCPPFWHRK 155 (408)
Q Consensus 140 il~~ll~G~~pf~~~~ 155 (408)
++|+|++|.+||....
T Consensus 205 il~el~~g~~~f~~~~ 220 (317)
T cd07868 205 IFAELLTSEPIFHCRQ 220 (317)
T ss_pred HHHHHHhCCCCccCCc
Confidence 9999999999997543
No 71
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=2.4e-35 Score=289.19 Aligned_cols=194 Identities=32% Similarity=0.590 Sum_probs=149.3
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC-----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEE
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN-----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENIL 78 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~-----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NIL 78 (408)
.+.|++++ .+.+ ..++..|+||||+.||. |.+.+. ++..++.++.||+.||+|||++||+||||||+|||
T Consensus 51 ~l~hp~i~-~~~~~~~~~~~~~lv~E~~~~~~--L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIl 127 (323)
T cd05595 51 NTRHPFLT-ALKYAFQTHDRLCFVMEYANGGE--LFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLM 127 (323)
T ss_pred hCCCCCCc-ceeeEEecCCEEEEEEeCCCCCc--HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEE
Confidence 35788755 4443 55567899999999998 766553 45889999999999999999999999999999999
Q ss_pred EecCCCEEEeccccchhccc-CcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhH
Q psy3880 79 LDDQMNVKLTDFGFARVLKK-GEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 157 (408)
Q Consensus 79 l~~~~~iKl~DFGla~~~~~-~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~ 157 (408)
++.++.+||+|||++..... .......+||+.|+|||++.. ..++.++|+||+||++|+|++|..||.+.+
T Consensus 128 l~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwSlGvil~ell~g~~Pf~~~~-- 199 (323)
T cd05595 128 LDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLED------NDYGRAVDWWGLGVVMYEMMCGRLPFYNQD-- 199 (323)
T ss_pred EcCCCCEEecccHHhccccCCCCccccccCCcCcCCcccccC------CCCCchhchhhhHHHHHHHHhCCCCCCCCC--
Confidence 99999999999999875322 223345789999999999854 245666777777777777777666664432
Q ss_pred HHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcC
Q psy3880 158 VMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 237 (408)
Q Consensus 158 ~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~ 237 (408)
.......+....
T Consensus 200 --------------------------------------------------------------------~~~~~~~~~~~~ 211 (323)
T cd05595 200 --------------------------------------------------------------------HERLFELILMEE 211 (323)
T ss_pred --------------------------------------------------------------------HHHHHHHHhcCC
Confidence 233333444444
Q ss_pred CCCCCCcCCCCCccHHHHHHHhcccCCCCCC-----CHHHHHcCCCCCCC
Q psy3880 238 YSFSSPEWNDISEDPKDLIRKLLIVTPEDRY-----SVKEALNHSFFHPK 282 (408)
Q Consensus 238 ~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~-----ta~e~L~Hpwf~~~ 282 (408)
..++ ..+++++++||.+||..||.+|+ ++.++++||||...
T Consensus 212 ~~~p----~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h~~~~~~ 257 (323)
T cd05595 212 IRFP----RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSI 257 (323)
T ss_pred CCCC----CCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcCCCcCCC
Confidence 3333 35799999999999999999998 89999999999764
No 72
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=4.2e-35 Score=281.24 Aligned_cols=225 Identities=30% Similarity=0.416 Sum_probs=157.9
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhh---hCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEe
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDI---INSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLD 80 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~---~~~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl~ 80 (408)
.+.|+|++ .+.+ +.++..|+||||+.+|...+... -.+...++.++.|++.||+|||++||+||||||+||+++
T Consensus 56 ~l~h~~iv-~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~ 134 (287)
T cd07848 56 TLKQENIV-ELKEAFRRRGKLYLVFEYVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLIS 134 (287)
T ss_pred hCCCcccc-chhhhEecCCEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEc
Confidence 46788855 5554 45567799999999986222211 134578899999999999999999999999999999999
Q ss_pred cCCCEEEeccccchhcccCc--ccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHH
Q psy3880 81 DQMNVKLTDFGFARVLKKGE--KLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMV 158 (408)
Q Consensus 81 ~~~~iKl~DFGla~~~~~~~--~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~ 158 (408)
.++.+||+|||++....... ......||+.|+|||++.. ..++.++|+||+||++|+|++|++||.+.+...
T Consensus 135 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~------~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~ 208 (287)
T cd07848 135 HNDVLKLCDFGFARNLSEGSNANYTEYVATRWYRSPELLLG------APYGKAVDMWSVGCILGELSDGQPLFPGESEID 208 (287)
T ss_pred CCCcEEEeeccCcccccccccccccccccccccCCcHHHcC------CCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHH
Confidence 99999999999998764332 2234679999999999864 347889999999999999999999999877666
Q ss_pred HHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCC
Q psy3880 159 MLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKY 238 (408)
Q Consensus 159 ~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~ 238 (408)
.+..+...... .+++.+..- . .+.+- .....|......
T Consensus 209 ~~~~~~~~~~~------------~~~~~~~~~-~---------~~~~~--------~~~~~~~~~~~~------------ 246 (287)
T cd07848 209 QLFTIQKVLGP------------LPAEQMKLF-Y---------SNPRF--------HGLRFPAVNHPQ------------ 246 (287)
T ss_pred HHHHHHHhhCC------------CCHHHHHhh-h---------ccchh--------cccccCcccCcc------------
Confidence 55554432111 111111100 0 00000 000001000000
Q ss_pred CCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q psy3880 239 SFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFF 279 (408)
Q Consensus 239 ~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf 279 (408)
......+..+|++++|||++||++||++|||++|+|+||||
T Consensus 247 ~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~hp~f 287 (287)
T cd07848 247 SLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHPAF 287 (287)
T ss_pred cHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 00011124578999999999999999999999999999998
No 73
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=3.6e-35 Score=287.04 Aligned_cols=193 Identities=24% Similarity=0.486 Sum_probs=146.4
Q ss_pred cccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC-----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEE
Q psy3880 7 VAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN-----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILL 79 (408)
Q Consensus 7 ~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~-----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl 79 (408)
+.|+++ +.+.+ +.++..|+||||+.||. |.+.+. +..++..++.||+.||+|||++||+||||||+|||+
T Consensus 53 ~~~~~i-~~~~~~~~~~~~~~lv~E~~~~g~--L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~ 129 (316)
T cd05620 53 WENPFL-THLYCTFQTKEHLFFVMEFLNGGD--LMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVML 129 (316)
T ss_pred cCCCCc-cCeeEEEEeCCEEEEEECCCCCCc--HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEE
Confidence 467764 45543 45567899999999998 766653 347889999999999999999999999999999999
Q ss_pred ecCCCEEEeccccchhccc-CcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHH
Q psy3880 80 DDQMNVKLTDFGFARVLKK-GEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMV 158 (408)
Q Consensus 80 ~~~~~iKl~DFGla~~~~~-~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~ 158 (408)
+.++.+||+|||+++.... .......+||+.|+|||++.. ..++.++|+||+||++|+|++|..||.+.+
T Consensus 130 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslGvil~el~~g~~Pf~~~~--- 200 (316)
T cd05620 130 DRDGHIKIADFGMCKENVFGDNRASTFCGTPDYIAPEILQG------LKYTFSVDWWSFGVLLYEMLIGQSPFHGDD--- 200 (316)
T ss_pred CCCCCEEeCccCCCeecccCCCceeccCCCcCccCHHHHcC------CCCCcccchhhhHHHHHHHHhCCCCCCCCC---
Confidence 9999999999999875322 222345789999999999864 345666777777777777777766664433
Q ss_pred HHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCC
Q psy3880 159 MLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKY 238 (408)
Q Consensus 159 ~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~ 238 (408)
...+.+.+.....
T Consensus 201 -------------------------------------------------------------------~~~~~~~~~~~~~ 213 (316)
T cd05620 201 -------------------------------------------------------------------EDELFESIRVDTP 213 (316)
T ss_pred -------------------------------------------------------------------HHHHHHHHHhCCC
Confidence 2233333333333
Q ss_pred CCCCCcCCCCCccHHHHHHHhcccCCCCCCCH-HHHHcCCCCCCC
Q psy3880 239 SFSSPEWNDISEDPKDLIRKLLIVTPEDRYSV-KEALNHSFFHPK 282 (408)
Q Consensus 239 ~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta-~e~L~Hpwf~~~ 282 (408)
.++ ..+|.++++||++||..||++|+|+ +++++||||...
T Consensus 214 ~~~----~~~~~~~~~li~~~l~~dP~~R~~~~~~~~~h~~f~~~ 254 (316)
T cd05620 214 HYP----RWITKESKDILEKLFERDPTRRLGVVGNIRGHPFFKTI 254 (316)
T ss_pred CCC----CCCCHHHHHHHHHHccCCHHHcCCChHHHHcCCCcCCC
Confidence 332 1378999999999999999999997 589999999764
No 74
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=4.4e-35 Score=287.06 Aligned_cols=193 Identities=26% Similarity=0.530 Sum_probs=148.3
Q ss_pred ccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC-----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEe
Q psy3880 8 AHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN-----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLD 80 (408)
Q Consensus 8 ~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~-----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl~ 80 (408)
.|+++|+.+.. +..+..|+||||+.+|+ |.+.+. ++.++..++.||+.||+|||++||+||||||+|||++
T Consensus 58 ~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~--L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~ 135 (323)
T cd05616 58 GKPPFLTQLHSCFQTMDRLYFVMEYVNGGD--LMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLD 135 (323)
T ss_pred cCCCeEeeEEEEEecCCEEEEEEcCCCCCC--HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEEC
Confidence 45666766654 45567899999999998 776653 4578999999999999999999999999999999999
Q ss_pred cCCCEEEeccccchhccc-CcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHHH
Q psy3880 81 DQMNVKLTDFGFARVLKK-GEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVM 159 (408)
Q Consensus 81 ~~~~iKl~DFGla~~~~~-~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~~ 159 (408)
.++.+||+|||+++.... .......+||+.|+|||++.. ..++.++|+||+||++|+|++|..||.+
T Consensus 136 ~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwSlGvil~elltg~~Pf~~------ 203 (323)
T cd05616 136 SEGHIKIADFGMCKENMWDGVTTKTFCGTPDYIAPEIIAY------QPYGKSVDWWAFGVLLYEMLAGQAPFEG------ 203 (323)
T ss_pred CCCcEEEccCCCceecCCCCCccccCCCChhhcCHHHhcC------CCCCCccchhchhHHHHHHHhCCCCCCC------
Confidence 999999999999875432 223345789999999999864 2355666666666666666666555543
Q ss_pred HHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCCC
Q psy3880 160 LRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYS 239 (408)
Q Consensus 160 ~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~~ 239 (408)
.+...+...+......
T Consensus 204 ----------------------------------------------------------------~~~~~~~~~i~~~~~~ 219 (323)
T cd05616 204 ----------------------------------------------------------------EDEDELFQSIMEHNVA 219 (323)
T ss_pred ----------------------------------------------------------------CCHHHHHHHHHhCCCC
Confidence 3334444555555544
Q ss_pred CCCCcCCCCCccHHHHHHHhcccCCCCCCC-----HHHHHcCCCCCCC
Q psy3880 240 FSSPEWNDISEDPKDLIRKLLIVTPEDRYS-----VKEALNHSFFHPK 282 (408)
Q Consensus 240 f~~~~~~~iS~~~~dLI~klL~~dP~~R~t-----a~e~L~Hpwf~~~ 282 (408)
++ ..+|+++++||.+||+.||++|++ ..++++||||...
T Consensus 220 ~p----~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~~~~~ 263 (323)
T cd05616 220 YP----KSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYI 263 (323)
T ss_pred CC----CcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcCCCcCCC
Confidence 43 257999999999999999999998 4899999999764
No 75
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=5.1e-35 Score=286.36 Aligned_cols=192 Identities=30% Similarity=0.553 Sum_probs=145.6
Q ss_pred ccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC-----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEe
Q psy3880 8 AHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN-----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLD 80 (408)
Q Consensus 8 ~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~-----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl~ 80 (408)
.|++ |+.+.+ +.++..|+||||+.||. |.+.+. ++..++.++.||+.||.|||++||+||||||+|||++
T Consensus 54 ~hp~-i~~~~~~~~~~~~~~lv~E~~~~~~--L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~ 130 (321)
T cd05591 54 KHPF-LTALHCCFQTKDRLFFVMEYVNGGD--LMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLD 130 (321)
T ss_pred CCCC-ccceeeEEEcCCeEEEEEeCCCCCc--HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEEC
Confidence 5776 556554 45567899999999998 766653 4578899999999999999999999999999999999
Q ss_pred cCCCEEEeccccchhccc-CcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHHH
Q psy3880 81 DQMNVKLTDFGFARVLKK-GEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVM 159 (408)
Q Consensus 81 ~~~~iKl~DFGla~~~~~-~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~~ 159 (408)
.++.+||+|||++..... .......+||+.|+|||++.. ..|+.++|+||+||++|+|++|..||
T Consensus 131 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DvwslG~il~el~tg~~Pf-------- 196 (321)
T cd05591 131 AEGHCKLADFGMCKEGILNGVTTTTFCGTPDYIAPEILQE------LEYGPSVDWWALGVLMYEMMAGQPPF-------- 196 (321)
T ss_pred CCCCEEEeecccceecccCCccccccccCccccCHHHHcC------CCCCCccceechhHHHHHHhcCCCCC--------
Confidence 999999999999875432 222345679999999998853 23455555555555555555555555
Q ss_pred HHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCCC
Q psy3880 160 LRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYS 239 (408)
Q Consensus 160 ~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~~ 239 (408)
...+....+..+..+...
T Consensus 197 --------------------------------------------------------------~~~~~~~~~~~i~~~~~~ 214 (321)
T cd05591 197 --------------------------------------------------------------EADNEDDLFESILHDDVL 214 (321)
T ss_pred --------------------------------------------------------------CCCCHHHHHHHHHcCCCC
Confidence 444444445555555444
Q ss_pred CCCCcCCCCCccHHHHHHHhcccCCCCCC-------CHHHHHcCCCCCCC
Q psy3880 240 FSSPEWNDISEDPKDLIRKLLIVTPEDRY-------SVKEALNHSFFHPK 282 (408)
Q Consensus 240 f~~~~~~~iS~~~~dLI~klL~~dP~~R~-------ta~e~L~Hpwf~~~ 282 (408)
++. .+|.++++||++||+.||++|+ +++++++||||...
T Consensus 215 ~p~----~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp~~~~~ 260 (321)
T cd05591 215 YPV----WLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPFFKEI 260 (321)
T ss_pred CCC----CCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCCccCCC
Confidence 332 3689999999999999999999 99999999999654
No 76
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=4.5e-35 Score=286.97 Aligned_cols=194 Identities=35% Similarity=0.578 Sum_probs=146.4
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC-----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEE
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN-----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENIL 78 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~-----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NIL 78 (408)
.+.|+++| .+.+ +.++..|+||||+.||+ |.+.+. ++..++.++.||+.||+|||++||+||||||+|||
T Consensus 52 ~l~hp~iv-~~~~~~~~~~~~~lv~e~~~~g~--L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIl 128 (323)
T cd05575 52 NVKHPFLV-GLHYSFQTADKLYFVLDYVNGGE--LFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENIL 128 (323)
T ss_pred hCCCCCCC-CeeEEEEeCCEEEEEEcCCCCCC--HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeE
Confidence 36788765 4443 45567899999999998 777653 45788999999999999999999999999999999
Q ss_pred EecCCCEEEeccccchhccc-CcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhH
Q psy3880 79 LDDQMNVKLTDFGFARVLKK-GEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 157 (408)
Q Consensus 79 l~~~~~iKl~DFGla~~~~~-~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~ 157 (408)
++.++.+||+|||++..... .......+||+.|+|||++.. ..++.++|+|||||++|+|++|..||
T Consensus 129 l~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DvwslG~il~ell~g~~pf------ 196 (323)
T cd05575 129 LDSQGHVVLTDFGLCKEGIEHSKTTSTFCGTPEYLAPEVLRK------QPYDRTVDWWCLGAVLYEMLYGLPPF------ 196 (323)
T ss_pred ECCCCcEEEeccCCCcccccCCCccccccCChhhcChhhhcC------CCCCccccccccchhhhhhhcCCCCC------
Confidence 99999999999999875432 223345689999999998753 23445555555555555555555554
Q ss_pred HHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcC
Q psy3880 158 VMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 237 (408)
Q Consensus 158 ~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~ 237 (408)
...+..++...+..+.
T Consensus 197 ----------------------------------------------------------------~~~~~~~~~~~i~~~~ 212 (323)
T cd05575 197 ----------------------------------------------------------------YSRDTAEMYDNILNKP 212 (323)
T ss_pred ----------------------------------------------------------------CCCCHHHHHHHHHcCC
Confidence 4444444455555544
Q ss_pred CCCCCCcCCCCCccHHHHHHHhcccCCCCCCCH----HHHHcCCCCCCC
Q psy3880 238 YSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSV----KEALNHSFFHPK 282 (408)
Q Consensus 238 ~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta----~e~L~Hpwf~~~ 282 (408)
.... ..+++++++||++||+.||++|+|+ .|+++||||...
T Consensus 213 ~~~~----~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~il~~~~~~~~ 257 (323)
T cd05575 213 LRLK----PNISVSARHLLEGLLQKDRTKRLGAKDDFLEIKNHVFFSSI 257 (323)
T ss_pred CCCC----CCCCHHHHHHHHHHhhcCHHhCCCCCCCHHHHHcCCCcCCC
Confidence 4332 3579999999999999999999997 699999999764
No 77
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=7.6e-35 Score=285.52 Aligned_cols=194 Identities=35% Similarity=0.604 Sum_probs=147.5
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC-----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEE
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN-----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENIL 78 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~-----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NIL 78 (408)
.+.|+|++ .+.+ +.++..|+||||+.||. |++.+. .+..++.++.||+.||+|||++||+||||||+|||
T Consensus 56 ~l~hp~iv-~~~~~~~~~~~~~lv~e~~~~~~--L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil 132 (323)
T cd05584 56 AVKHPFIV-DLIYAFQTGGKLYLILEYLSGGE--LFMHLEREGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENIL 132 (323)
T ss_pred hCCCCchh-ceeeEEecCCeEEEEEeCCCCch--HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeE
Confidence 46898865 4433 45567899999999998 887763 34788899999999999999999999999999999
Q ss_pred EecCCCEEEeccccchhccc-CcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhH
Q psy3880 79 LDDQMNVKLTDFGFARVLKK-GEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 157 (408)
Q Consensus 79 l~~~~~iKl~DFGla~~~~~-~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~ 157 (408)
++.++.+||+|||+++.... .......+||+.|+|||++.. ..++.++|+||+||++|+|++|..||.
T Consensus 133 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~ell~G~~pf~----- 201 (323)
T cd05584 133 LDAQGHVKLTDFGLCKESIHEGTVTHTFCGTIEYMAPEILMR------SGHGKAVDWWSLGALMYDMLTGAPPFT----- 201 (323)
T ss_pred ECCCCCEEEeeCcCCeecccCCCcccccCCCccccChhhccC------CCCCCcceecccHHHHHHHhcCCCCCC-----
Confidence 99999999999999875332 222334689999999998854 234555666666666666655555554
Q ss_pred HHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcC
Q psy3880 158 VMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 237 (408)
Q Consensus 158 ~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~ 237 (408)
..+.......+..+.
T Consensus 202 -----------------------------------------------------------------~~~~~~~~~~~~~~~ 216 (323)
T cd05584 202 -----------------------------------------------------------------AENRKKTIDKILKGK 216 (323)
T ss_pred -----------------------------------------------------------------CCCHHHHHHHHHcCC
Confidence 333333444455444
Q ss_pred CCCCCCcCCCCCccHHHHHHHhcccCCCCCC-----CHHHHHcCCCCCCC
Q psy3880 238 YSFSSPEWNDISEDPKDLIRKLLIVTPEDRY-----SVKEALNHSFFHPK 282 (408)
Q Consensus 238 ~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~-----ta~e~L~Hpwf~~~ 282 (408)
..++ ..+++++++||++||+.||++|+ +++++++||||...
T Consensus 217 ~~~~----~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~~~~~~ 262 (323)
T cd05584 217 LNLP----PYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPFFRHV 262 (323)
T ss_pred CCCC----CCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCCCcCCC
Confidence 4332 35789999999999999999999 89999999999764
No 78
>KOG0986|consensus
Probab=100.00 E-value=1.6e-35 Score=287.62 Aligned_cols=198 Identities=33% Similarity=0.560 Sum_probs=163.0
Q ss_pred cccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhh-------CCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcE
Q psy3880 7 VAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDII-------NSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENI 77 (408)
Q Consensus 7 ~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~-------~~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NI 77 (408)
..++++||.+.+ +..|-..||+.+|+||+ |..+| .+++.+++|+.+|+.||++||+.+||+|||||+||
T Consensus 241 kV~s~FiVslaYAfeTkd~LClVLtlMNGGD--LkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNI 318 (591)
T KOG0986|consen 241 KVSSPFIVSLAYAFETKDALCLVLTLMNGGD--LKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENI 318 (591)
T ss_pred HhccCcEEEEeeeecCCCceEEEEEeecCCc--eeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhhe
Confidence 357889998776 66678899999999999 65554 35689999999999999999999999999999999
Q ss_pred EEecCCCEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhH
Q psy3880 78 LLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 157 (408)
Q Consensus 78 Ll~~~~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~ 157 (408)
|+|+.|+|+|+|+|+|..+..++.....+||.+|||||++... .|+..+|+||+||++|+|+.|+.||......
T Consensus 319 LLDd~GhvRISDLGLAvei~~g~~~~~rvGT~GYMAPEvl~ne------~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeK 392 (591)
T KOG0986|consen 319 LLDDHGHVRISDLGLAVEIPEGKPIRGRVGTVGYMAPEVLQNE------VYDFSPDWFSLGCLLYEMIAGHSPFRQRKEK 392 (591)
T ss_pred eeccCCCeEeeccceEEecCCCCccccccCcccccCHHHHcCC------cccCCccHHHHHhHHHHHHcccCchhhhhhh
Confidence 9999999999999999999888888888999999999999753 3777778888777777777777777543321
Q ss_pred HHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcC
Q psy3880 158 VMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 237 (408)
Q Consensus 158 ~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~ 237 (408)
. ...+.-+.+++..
T Consensus 393 v------------------------------------------------------------------k~eEvdrr~~~~~ 406 (591)
T KOG0986|consen 393 V------------------------------------------------------------------KREEVDRRTLEDP 406 (591)
T ss_pred h------------------------------------------------------------------hHHHHHHHHhcch
Confidence 1 1123444555555
Q ss_pred CCCCCCcCCCCCccHHHHHHHhcccCCCCCCC-----HHHHHcCCCCCCC
Q psy3880 238 YSFSSPEWNDISEDPKDLIRKLLIVTPEDRYS-----VKEALNHSFFHPK 282 (408)
Q Consensus 238 ~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~t-----a~e~L~Hpwf~~~ 282 (408)
..++ +..|+++++|.+.+|++||++|+. ++++.+||||+..
T Consensus 407 ~ey~----~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~l 452 (591)
T KOG0986|consen 407 EEYS----DKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEHPFFKDL 452 (591)
T ss_pred hhcc----cccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhCcccccC
Confidence 5554 468999999999999999999985 7899999999865
No 79
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=5.6e-35 Score=286.56 Aligned_cols=194 Identities=35% Similarity=0.591 Sum_probs=146.5
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC-----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEE
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN-----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENIL 78 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~-----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NIL 78 (408)
.+.|++++ .+.+ +.++..|+||||+.||. |.+.+. .+..++.++.||+.||+|||++||+||||||+|||
T Consensus 52 ~~~h~~Iv-~~~~~~~~~~~~~lv~e~~~~~~--L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nil 128 (325)
T cd05602 52 NVKHPFLV-GLHFSFQTADKLYFVLDYINGGE--LFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENIL 128 (325)
T ss_pred hCCCCCCC-ceeEEEEcCCeEEEEEeCCCCCc--HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeE
Confidence 46788755 4443 45667899999999998 777663 35788999999999999999999999999999999
Q ss_pred EecCCCEEEeccccchhccc-CcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhH
Q psy3880 79 LDDQMNVKLTDFGFARVLKK-GEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 157 (408)
Q Consensus 79 l~~~~~iKl~DFGla~~~~~-~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~ 157 (408)
++.++.+||+|||+++.... .......+||+.|+|||++.+ ..++.++|+||+||++|+|++|
T Consensus 129 i~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~el~~g---------- 192 (325)
T cd05602 129 LDSQGHIVLTDFGLCKENIEHNGTTSTFCGTPEYLAPEVLHK------QPYDRTVDWWCLGAVLYEMLYG---------- 192 (325)
T ss_pred ECCCCCEEEccCCCCcccccCCCCcccccCCccccCHHHHcC------CCCCCccccccccHHHHHHhcC----------
Confidence 99999999999999875432 223345789999999998864 2344455555555555555555
Q ss_pred HHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcC
Q psy3880 158 VMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 237 (408)
Q Consensus 158 ~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~ 237 (408)
.+||...+..+++..+....
T Consensus 193 ------------------------------------------------------------~~pf~~~~~~~~~~~i~~~~ 212 (325)
T cd05602 193 ------------------------------------------------------------LPPFYSRNTAEMYDNILNKP 212 (325)
T ss_pred ------------------------------------------------------------CCCCCCCCHHHHHHHHHhCC
Confidence 44554444444555555444
Q ss_pred CCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHH----HHHcCCCCCCC
Q psy3880 238 YSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVK----EALNHSFFHPK 282 (408)
Q Consensus 238 ~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~----e~L~Hpwf~~~ 282 (408)
..+. ..+++++++||++||+.||.+|+++. ++++|+||...
T Consensus 213 ~~~~----~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~i~~~~~~~~~ 257 (325)
T cd05602 213 LQLK----PNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKNHIFFSPI 257 (325)
T ss_pred cCCC----CCCCHHHHHHHHHHcccCHHHCCCCCCCHHHHhcCcccCCC
Confidence 3332 36899999999999999999999876 89999999764
No 80
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=7.3e-35 Score=286.05 Aligned_cols=202 Identities=30% Similarity=0.470 Sum_probs=151.0
Q ss_pred cccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC------CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEE
Q psy3880 7 VAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN------SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENIL 78 (408)
Q Consensus 7 ~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~------~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NIL 78 (408)
+.|++++ .+.+ +.++..|+||||+.||. |.+.+. ++..++.++.||+.||+|||++||+||||||+|||
T Consensus 58 ~~~~~i~-~~~~~~~~~~~~~lv~e~~~~~~--L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIl 134 (330)
T cd05601 58 SNSPWIP-QLQYAFQDKDNLYLVMEYQPGGD--LLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVL 134 (330)
T ss_pred CCCCCCc-ceeeEEecCCeEEEEECCCCCCC--HHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheE
Confidence 5677654 5543 45567899999999998 777663 34788999999999999999999999999999999
Q ss_pred EecCCCEEEeccccchhcccCccc--ccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchh
Q psy3880 79 LDDQMNVKLTDFGFARVLKKGEKL--MDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQ 156 (408)
Q Consensus 79 l~~~~~iKl~DFGla~~~~~~~~~--~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~ 156 (408)
++.++.+||+|||++..+...... ...+||+.|+|||++..........
T Consensus 135 l~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~----------------------------- 185 (330)
T cd05601 135 IDRTGHIKLADFGSAARLTANKMVNSKLPVGTPDYIAPEVLTTMNGDGKGT----------------------------- 185 (330)
T ss_pred ECCCCCEEeccCCCCeECCCCCceeeecccCCccccCHHHhccccccccCC-----------------------------
Confidence 999999999999999876543322 2357999999999986321110112
Q ss_pred HHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhc
Q psy3880 157 MVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEG 236 (408)
Q Consensus 157 ~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~ 236 (408)
|+.++|+||+||++|+|++|.+||...+....+.++...
T Consensus 186 -----------------------------------------~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~ 224 (330)
T cd05601 186 -----------------------------------------YGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNF 224 (330)
T ss_pred -----------------------------------------CCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcC
Confidence 344566666666666666666666655555555555544
Q ss_pred CCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q psy3880 237 KYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPK 282 (408)
Q Consensus 237 ~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~ 282 (408)
......+....+|+++++||++||. ||++|||++++++||||...
T Consensus 225 ~~~~~~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h~~~~~~ 269 (330)
T cd05601 225 QRFLKFPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCHPFFSKI 269 (330)
T ss_pred CCccCCCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCCCCcCCC
Confidence 3222233345689999999999998 99999999999999999763
No 81
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=1.1e-34 Score=290.31 Aligned_cols=202 Identities=31% Similarity=0.521 Sum_probs=155.8
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEE
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILL 79 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl 79 (408)
.+.|++++ ++.. ..++..|+||||+.||. |.+.+. ++..++.++.||+.||+|||++||+||||||+|||+
T Consensus 99 ~~~hp~iv-~~~~~~~~~~~~~lv~Ey~~gg~--L~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll 175 (371)
T cd05622 99 FANSPWVV-QLFYAFQDDRYLYMVMEYMPGGD--LVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLL 175 (371)
T ss_pred hCCCCCCC-eEEEEEEcCCEEEEEEcCCCCCc--HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEE
Confidence 45788755 5543 45567899999999998 777663 357889999999999999999999999999999999
Q ss_pred ecCCCEEEeccccchhcccCcc--cccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhH
Q psy3880 80 DDQMNVKLTDFGFARVLKKGEK--LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 157 (408)
Q Consensus 80 ~~~~~iKl~DFGla~~~~~~~~--~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~ 157 (408)
+.++.+||+|||+|..+..... ....+||+.|+|||++..... ..
T Consensus 176 ~~~~~ikL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~--~~------------------------------- 222 (371)
T cd05622 176 DKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGG--DG------------------------------- 222 (371)
T ss_pred CCCCCEEEEeCCceeEcCcCCcccccCcccCccccCHHHHhccCC--Cc-------------------------------
Confidence 9999999999999987653321 235679999999999864210 01
Q ss_pred HHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcC
Q psy3880 158 VMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 237 (408)
Q Consensus 158 ~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~ 237 (408)
.|+.++|+||+||++|+|++|.+||...+.......|....
T Consensus 223 ---------------------------------------~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~ 263 (371)
T cd05622 223 ---------------------------------------YYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHK 263 (371)
T ss_pred ---------------------------------------cCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCC
Confidence 13346677777777777777777777766666777777766
Q ss_pred CCCCCCcCCCCCccHHHHHHHhcccCCCC--CCCHHHHHcCCCCCCC
Q psy3880 238 YSFSSPEWNDISEDPKDLIRKLLIVTPED--RYSVKEALNHSFFHPK 282 (408)
Q Consensus 238 ~~f~~~~~~~iS~~~~dLI~klL~~dP~~--R~ta~e~L~Hpwf~~~ 282 (408)
..+..+.+..+|.++++||.+||..++.+ |++++|+++||||...
T Consensus 264 ~~~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~~~~~~ 310 (371)
T cd05622 264 NSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKND 310 (371)
T ss_pred CcccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCcccCCC
Confidence 55555566789999999999999844433 7799999999999764
No 82
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=1.7e-34 Score=286.92 Aligned_cols=237 Identities=24% Similarity=0.395 Sum_probs=158.9
Q ss_pred ccccCCcEEEEeccC---C-----cHHHHHHHHHhhchhhHHhhhCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcE
Q psy3880 6 MVAHSRVVVRVKEEG---D-----DLKHLAAQVVDKGEAAVQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENI 77 (408)
Q Consensus 6 ~~~~~~~i~~~~~~~---~-----~~~~lv~e~~~~g~~~l~~~~~~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NI 77 (408)
.+.|+|+| ++.+.. + ...|+||||+.++.......-.+...++.++.||+.||+|||++||+||||||+||
T Consensus 76 ~l~h~niv-~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NI 154 (359)
T cd07876 76 CVNHKNII-SLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 154 (359)
T ss_pred hCCCCCEe-eeeeeeccCCCccccceeEEEEeCCCcCHHHHHhccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHE
Confidence 46788855 554421 1 23589999998764212111235688899999999999999999999999999999
Q ss_pred EEecCCCEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhH
Q psy3880 78 LLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 157 (408)
Q Consensus 78 Ll~~~~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~ 157 (408)
|++.++.+||+|||+++............||+.|+|||++.+ ..++.++|+||+||++|+|++|..||.+.+..
T Consensus 155 l~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~------~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~ 228 (359)
T cd07876 155 VVKSDCTLKILDFGLARTACTNFMMTPYVVTRYYRAPEVILG------MGYKENVDIWSVGCIMGELVKGSVIFQGTDHI 228 (359)
T ss_pred EECCCCCEEEecCCCccccccCccCCCCcccCCCCCchhccC------CCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH
Confidence 999999999999999986554444455788999999999864 35788999999999999999999999988776
Q ss_pred HHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcC
Q psy3880 158 VMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 237 (408)
Q Consensus 158 ~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~ 237 (408)
.....+........ .+.. ... --.........+.+.+....+..... .
T Consensus 229 ~~~~~~~~~~~~~~------------~~~~-~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 276 (359)
T cd07876 229 DQWNKVIEQLGTPS------------AEFM-NRL----------------QPTVRNYVENRPQYPGISFEELFPDW---I 276 (359)
T ss_pred HHHHHHHHhcCCCc------------HHHH-HHH----------------HHHHHHHHhhCCCCCCcchhhhcccc---c
Confidence 66555544211100 0000 000 00000001111111111111110000 0
Q ss_pred CCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCC
Q psy3880 238 YSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHP 281 (408)
Q Consensus 238 ~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~ 281 (408)
+..........++++++||.+||+.||++|||+.|+|+||||..
T Consensus 277 ~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~ 320 (359)
T cd07876 277 FPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPYITV 320 (359)
T ss_pred cccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCchhhh
Confidence 00011112245788999999999999999999999999999974
No 83
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=1.9e-34 Score=276.49 Aligned_cols=216 Identities=30% Similarity=0.441 Sum_probs=156.6
Q ss_pred cccCCcEEEEecc-------CCcHHHHHHHHHhhchhhHHhhh-------CCHHHHHHHHHHHHHHHHHHHHCCCeeccC
Q psy3880 7 VAHSRVVVRVKEE-------GDDLKHLAAQVVDKGEAAVQDII-------NSNPALRYIMRQLFEALEHVHNHSVVHRDL 72 (408)
Q Consensus 7 ~~~~~~i~~~~~~-------~~~~~~lv~e~~~~g~~~l~~~~-------~~~~~~r~i~~qil~aL~~LH~~~IvHRDL 72 (408)
+.|+|++ ++.+. ..+..++|+|++.++ |.+.+ .+.++++.++.||+.||+|||++||+||||
T Consensus 59 ~~h~ni~-~~~~~~~~~~~~~~~~~~lv~e~~~~~---l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~di 134 (288)
T cd07863 59 FDHPNIV-RLMDVCATSRTDRETKVTLVFEHVDQD---LRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDL 134 (288)
T ss_pred cCCCCee-eeeeeeccccCCCCceEEEEEcccccC---HHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCC
Confidence 4688755 55432 123468999999864 44433 245889999999999999999999999999
Q ss_pred CCCcEEEecCCCEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCC
Q psy3880 73 KPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFW 152 (408)
Q Consensus 73 Kp~NILl~~~~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~ 152 (408)
||+|||++.++.+||+|||++.............||+.|+|||++.. ..++.++|+||+||++|+|++|.+||.
T Consensus 135 kp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~------~~~~~~~DiwslG~~l~~l~~g~~~f~ 208 (288)
T cd07863 135 KPENILVTSGGQVKLADFGLARIYSCQMALTPVVVTLWYRAPEVLLQ------STYATPVDMWSVGCIFAEMFRRKPLFC 208 (288)
T ss_pred CHHHEEECCCCCEEECccCccccccCcccCCCccccccccCchHhhC------CCCCCcchhhhHHHHHHHHHhCCcCcC
Confidence 99999999999999999999987655444445678999999999864 357889999999999999999999998
Q ss_pred CchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHH
Q psy3880 153 HRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRN 232 (408)
Q Consensus 153 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~ 232 (408)
+.+....+.++...........|..... . ....|...
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------------~--~~~~~~~~-------- 245 (288)
T cd07863 209 GNSEADQLGKIFDLIGLPPEDDWPRDVT---------------------------------L--PRGAFSPR-------- 245 (288)
T ss_pred CCCHHHHHHHHHHHhCCCChhhCccccc---------------------------------c--cccccCCC--------
Confidence 8877776666654321111111110000 0 00000000
Q ss_pred HHhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q psy3880 233 IMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFF 279 (408)
Q Consensus 233 i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf 279 (408)
........+..++.+++|||.+||+.||++|||+.|+|+||||
T Consensus 246 ----~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~hp~f 288 (288)
T cd07863 246 ----GPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQHPFF 288 (288)
T ss_pred ----CCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 0000011123578899999999999999999999999999998
No 84
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=1.1e-34 Score=284.41 Aligned_cols=194 Identities=30% Similarity=0.534 Sum_probs=149.1
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEE
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILL 79 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl 79 (408)
.+.|+|++ .+.+ +..+..|+||||+.||+ |...+. +++++..++.||+.||+|||++||+||||||+|||+
T Consensus 58 ~l~hp~i~-~~~~~~~~~~~~~lv~E~~~~~~--L~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill 134 (324)
T cd05589 58 SERHPFLV-NLFACFQTEDHVCFVMEYAAGGD--LMMHIHTDVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLL 134 (324)
T ss_pred ccCCCChh-ceeeEEEcCCEEEEEEcCCCCCc--HHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEE
Confidence 45798855 5443 45567899999999998 766653 457899999999999999999999999999999999
Q ss_pred ecCCCEEEeccccchhccc-CcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHH
Q psy3880 80 DDQMNVKLTDFGFARVLKK-GEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMV 158 (408)
Q Consensus 80 ~~~~~iKl~DFGla~~~~~-~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~ 158 (408)
+.++.+||+|||++..... .......+||+.|+|||++.+ ..++.++|+||+||++|+|++|..||.+.+
T Consensus 135 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~------~~~~~~~DiwslG~il~el~~G~~pf~~~~--- 205 (324)
T cd05589 135 DTEGFVKIADFGLCKEGMGFGDRTSTFCGTPEFLAPEVLTE------TSYTRAVDWWGLGVLIYEMLVGESPFPGDD--- 205 (324)
T ss_pred CCCCcEEeCcccCCccCCCCCCcccccccCccccCHhHhcC------CCCCcccchhhHHHHHHHHHhCCCCCCCCC---
Confidence 9999999999999875332 223345789999999999864 235566677777777776666666664433
Q ss_pred HHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCC
Q psy3880 159 MLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKY 238 (408)
Q Consensus 159 ~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~ 238 (408)
..+.+..+..+..
T Consensus 206 -------------------------------------------------------------------~~~~~~~i~~~~~ 218 (324)
T cd05589 206 -------------------------------------------------------------------EEEVFDSIVNDEV 218 (324)
T ss_pred -------------------------------------------------------------------HHHHHHHHHhCCC
Confidence 3333444444444
Q ss_pred CCCCCcCCCCCccHHHHHHHhcccCCCCCC-----CHHHHHcCCCCCCC
Q psy3880 239 SFSSPEWNDISEDPKDLIRKLLIVTPEDRY-----SVKEALNHSFFHPK 282 (408)
Q Consensus 239 ~f~~~~~~~iS~~~~dLI~klL~~dP~~R~-----ta~e~L~Hpwf~~~ 282 (408)
.++ ..+|+++.+||++||+.||.+|| +++++++||||...
T Consensus 219 ~~p----~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~~f~~~ 263 (324)
T cd05589 219 RYP----RFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQPFFRDI 263 (324)
T ss_pred CCC----CCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCCCcCCC
Confidence 333 25789999999999999999999 69999999999764
No 85
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=8.8e-35 Score=287.20 Aligned_cols=196 Identities=33% Similarity=0.613 Sum_probs=145.5
Q ss_pred cccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC-----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEE
Q psy3880 7 VAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN-----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILL 79 (408)
Q Consensus 7 ~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~-----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl 79 (408)
+.|++++ .+.+ +.++..|+||||+.||. |.+.+. +...++.++.||+.||+|||++||+||||||+|||+
T Consensus 58 ~~~~~i~-~~~~~~~~~~~~~lv~e~~~~~~--L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll 134 (350)
T cd05573 58 ADSPWIV-KLYYSFQDEEHLYLVMEYMPGGD--LMNLLIRKDVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILI 134 (350)
T ss_pred cCCCCcc-chhhheecCCeEEEEEcCCCCCC--HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEE
Confidence 5577644 5554 45567899999999998 777653 457899999999999999999999999999999999
Q ss_pred ecCCCEEEeccccchhcccCc------------------------------ccccCCCCCcccChhhhhhccccCcCCCC
Q psy3880 80 DDQMNVKLTDFGFARVLKKGE------------------------------KLMDLCGTPGYLAPEVLRANMFEDATGYG 129 (408)
Q Consensus 80 ~~~~~iKl~DFGla~~~~~~~------------------------------~~~~~~gt~~y~aPE~l~~~~~~~~~~~~ 129 (408)
+.++.+||+|||++..+.... ......||+.|+|||++.
T Consensus 135 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~----------- 203 (350)
T cd05573 135 DADGHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLR----------- 203 (350)
T ss_pred CCCCCEEeecCCCCccCcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHc-----------
Confidence 999999999999997654332 111233455555555443
Q ss_pred cchhhhhhhHHHHHHHhCCCCCCCchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhh
Q psy3880 130 QAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGV 209 (408)
Q Consensus 130 ~~~DiwSlGvil~~ll~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gv 209 (408)
.. .|+.++|+||+||
T Consensus 204 -----------------------------------------------------------~~------~~~~~~DiwSlG~ 218 (350)
T cd05573 204 -----------------------------------------------------------GT------PYGLECDWWSLGV 218 (350)
T ss_pred -----------------------------------------------------------CC------CCCCceeeEecch
Confidence 22 2445666666777
Q ss_pred hHHHhhcCCCCCCCchhHHHHHHHHhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCC-HHHHHcCCCCCCC
Q psy3880 210 IMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYS-VKEALNHSFFHPK 282 (408)
Q Consensus 210 ily~ll~g~~Pf~~~~~~~~~~~i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~t-a~e~L~Hpwf~~~ 282 (408)
++|+|++|.+||...+.......+......+..+....+|+++++||.+||. ||.+|++ ++|+|+||||...
T Consensus 219 il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp~~~~~ 291 (350)
T cd05573 219 ILYEMLYGFPPFYSDTLQETYNKIINWKESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSHPFFKGI 291 (350)
T ss_pred hhhhhccCCCCCCCCCHHHHHHHHhccCCcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcCCCcCCC
Confidence 7777777777776666555566666533333333444589999999999997 9999999 9999999999864
No 86
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=1e-34 Score=284.69 Aligned_cols=194 Identities=33% Similarity=0.545 Sum_probs=145.7
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC-----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEE
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN-----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENIL 78 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~-----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NIL 78 (408)
.+.|+|+| .+.+ +.++..|+||||+.||+ |.+.+. ++.+++.++.||+.||+|||++||+||||||+|||
T Consensus 52 ~~~hp~iv-~~~~~~~~~~~~~lv~e~~~~~~--L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIl 128 (325)
T cd05604 52 NVKHPFLV-GLHYSFQTTEKLYFVLDFVNGGE--LFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENIL 128 (325)
T ss_pred hCCCCCCc-cEEEEEecCCEEEEEEcCCCCCC--HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeE
Confidence 36788765 5443 55677899999999998 776653 45789999999999999999999999999999999
Q ss_pred EecCCCEEEeccccchhccc-CcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhH
Q psy3880 79 LDDQMNVKLTDFGFARVLKK-GEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 157 (408)
Q Consensus 79 l~~~~~iKl~DFGla~~~~~-~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~ 157 (408)
++.++.+||+|||+++.... .......+||+.|+|||++.. ..++.++|+||+||++|+|
T Consensus 129 l~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DvwslG~il~el------------- 189 (325)
T cd05604 129 LDSQGHVVLTDFGLCKEGIAQSDTTTTFCGTPEYLAPEVIRK------QPYDNTVDWWCLGAVLYEM------------- 189 (325)
T ss_pred ECCCCCEEEeecCCcccCCCCCCCcccccCChhhCCHHHHcC------CCCCCcCccccccceehhh-------------
Confidence 99999999999999875322 223345689999999999854 2344445555555555554
Q ss_pred HHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcC
Q psy3880 158 VMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 237 (408)
Q Consensus 158 ~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~ 237 (408)
++|.+||...+..++...+....
T Consensus 190 ---------------------------------------------------------~~G~~pf~~~~~~~~~~~~~~~~ 212 (325)
T cd05604 190 ---------------------------------------------------------LYGLPPFYCRDVAEMYDNILHKP 212 (325)
T ss_pred ---------------------------------------------------------hcCCCCCCCCCHHHHHHHHHcCC
Confidence 44555554444444555555544
Q ss_pred CCCCCCcCCCCCccHHHHHHHhcccCCCCCCCH----HHHHcCCCCCCC
Q psy3880 238 YSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSV----KEALNHSFFHPK 282 (408)
Q Consensus 238 ~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta----~e~L~Hpwf~~~ 282 (408)
..+. ..+|.++.+||++||..||.+||++ .++++||||...
T Consensus 213 ~~~~----~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h~~f~~~ 257 (325)
T cd05604 213 LVLR----PGASLTAWSILEELLEKDRQRRLGAKEDFLEIQEHPFFESL 257 (325)
T ss_pred ccCC----CCCCHHHHHHHHHHhccCHHhcCCCCCCHHHHhcCCCcCCC
Confidence 3332 2478899999999999999999986 599999999764
No 87
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=1.7e-34 Score=283.18 Aligned_cols=194 Identities=26% Similarity=0.537 Sum_probs=149.6
Q ss_pred cccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC-----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEE
Q psy3880 7 VAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN-----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILL 79 (408)
Q Consensus 7 ~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~-----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl 79 (408)
+.|+++|+.+.. +.++..|+||||+.||+ |.+.+. ++.+++.++.||+.||+|||++||+||||||+|||+
T Consensus 57 ~~~~~~i~~~~~~~~~~~~~~lv~Ey~~~g~--L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill 134 (323)
T cd05615 57 QDKPPFLTQLHSCFQTVDRLYFVMEYVNGGD--LMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVML 134 (323)
T ss_pred ccCCCchhheeeEEecCCEEEEEEcCCCCCc--HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEE
Confidence 457777776654 45567899999999998 877653 458899999999999999999999999999999999
Q ss_pred ecCCCEEEeccccchhcccC-cccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHH
Q psy3880 80 DDQMNVKLTDFGFARVLKKG-EKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMV 158 (408)
Q Consensus 80 ~~~~~iKl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~ 158 (408)
+.++.+||+|||+++..... ......+||+.|+|||++.+ ..++.++|+||+||++|+|++|..||.+
T Consensus 135 ~~~~~ikL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslGvil~elltG~~pf~~----- 203 (323)
T cd05615 135 DSEGHIKIADFGMCKEHMVDGVTTRTFCGTPDYIAPEIIAY------QPYGKSVDWWAYGVLLYEMLAGQPPFDG----- 203 (323)
T ss_pred CCCCCEEEeccccccccCCCCccccCccCCccccCHHHHcC------CCCCCccchhhhHHHHHHHHhCCCCCCC-----
Confidence 99999999999998754322 22345679999999999864 2355666666666666666666666544
Q ss_pred HHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCC
Q psy3880 159 MLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKY 238 (408)
Q Consensus 159 ~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~ 238 (408)
.+...+...+.....
T Consensus 204 -----------------------------------------------------------------~~~~~~~~~i~~~~~ 218 (323)
T cd05615 204 -----------------------------------------------------------------EDEDELFQSIMEHNV 218 (323)
T ss_pred -----------------------------------------------------------------CCHHHHHHHHHhCCC
Confidence 333334445555444
Q ss_pred CCCCCcCCCCCccHHHHHHHhcccCCCCCCC-----HHHHHcCCCCCCC
Q psy3880 239 SFSSPEWNDISEDPKDLIRKLLIVTPEDRYS-----VKEALNHSFFHPK 282 (408)
Q Consensus 239 ~f~~~~~~~iS~~~~dLI~klL~~dP~~R~t-----a~e~L~Hpwf~~~ 282 (408)
.++ ..+|.++++||.+||..||.+|++ .+++++||||...
T Consensus 219 ~~p----~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~f~~~ 263 (323)
T cd05615 219 SYP----KSLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREHAFFRRI 263 (323)
T ss_pred CCC----ccCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcCcccCCC
Confidence 433 357899999999999999999997 5799999999864
No 88
>KOG4236|consensus
Probab=100.00 E-value=4.8e-35 Score=288.09 Aligned_cols=196 Identities=34% Similarity=0.615 Sum_probs=165.8
Q ss_pred ccccCCcEEEEe--ccCCcHHHHHHHHHhhchhhHHhhhCCH------HHHHHHHHHHHHHHHHHHHCCCeeccCCCCcE
Q psy3880 6 MVAHSRVVVRVK--EEGDDLKHLAAQVVDKGEAAVQDIINSN------PALRYIMRQLFEALEHVHNHSVVHRDLKPENI 77 (408)
Q Consensus 6 ~~~~~~~i~~~~--~~~~~~~~lv~e~~~~g~~~l~~~~~~~------~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NI 77 (408)
.+.||. ||.+. -|..+..+.|||.+.|.. |-=++.++ ...++++.|||.||.|||.+||||+||||||+
T Consensus 619 ~l~HPG-iV~le~M~ET~ervFVVMEKl~GDM--LEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENV 695 (888)
T KOG4236|consen 619 NLHHPG-IVNLECMFETPERVFVVMEKLHGDM--LEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENV 695 (888)
T ss_pred hcCCCC-eeEEEEeecCCceEEEEehhhcchH--HHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchhe
Confidence 356776 55655 467788899999998875 43334333 57899999999999999999999999999999
Q ss_pred EEecC---CCEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCc
Q psy3880 78 LLDDQ---MNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHR 154 (408)
Q Consensus 78 Ll~~~---~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~ 154 (408)
|+.+. -.+||||||+|+++....--.+.+|||.|+|||+++..
T Consensus 696 LLas~~~FPQvKlCDFGfARiIgEksFRrsVVGTPAYLaPEVLrnk---------------------------------- 741 (888)
T KOG4236|consen 696 LLASASPFPQVKLCDFGFARIIGEKSFRRSVVGTPAYLAPEVLRNK---------------------------------- 741 (888)
T ss_pred eeccCCCCCceeeccccceeecchhhhhhhhcCCccccCHHHHhhc----------------------------------
Confidence 99754 36999999999999877666778999999999999742
Q ss_pred hhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHH
Q psy3880 155 KQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIM 234 (408)
Q Consensus 155 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~ 234 (408)
+|+..-||||.|||+|.-|+|..||... .++-.+|.
T Consensus 742 ------------------------------------------GyNrSLDMWSVGVIiYVsLSGTFPFNEd--EdIndQIQ 777 (888)
T KOG4236|consen 742 ------------------------------------------GYNRSLDMWSVGVIIYVSLSGTFPFNED--EDINDQIQ 777 (888)
T ss_pred ------------------------------------------cccccccceeeeEEEEEEecccccCCCc--cchhHHhh
Confidence 3455778888999999999999998654 24556789
Q ss_pred hcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q psy3880 235 EGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPK 282 (408)
Q Consensus 235 ~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~ 282 (408)
++.+-|+...|.++|++|.|||.++|++.-.+|+|++..|.|||++..
T Consensus 778 NAaFMyPp~PW~eis~~AidlIn~LLqVkm~kRysvdk~lsh~Wlq~y 825 (888)
T KOG4236|consen 778 NAAFMYPPNPWSEISPEAIDLINNLLQVKMRKRYSVDKSLSHPWLQDY 825 (888)
T ss_pred ccccccCCCchhhcCHHHHHHHHHHHHHHHHHhcchHhhccchhhhcc
Confidence 999999999999999999999999999999999999999999999875
No 89
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=1.7e-34 Score=282.35 Aligned_cols=193 Identities=28% Similarity=0.562 Sum_probs=146.7
Q ss_pred cccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC-----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEE
Q psy3880 7 VAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN-----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILL 79 (408)
Q Consensus 7 ~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~-----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl 79 (408)
..|++++ ++.+ +..+..|+||||+.||. |.+.+. ++..++.++.||+.||+|||++||+||||||+|||+
T Consensus 53 ~~hp~i~-~~~~~~~~~~~~~lv~e~~~gg~--L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill 129 (316)
T cd05592 53 WEHPFLT-HLFCTFQTKEHLFFVMEYLNGGD--LMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLL 129 (316)
T ss_pred cCCCCcc-ceeeEEEcCCEEEEEEcCCCCCc--HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEE
Confidence 4677755 5554 34567899999999998 777653 457889999999999999999999999999999999
Q ss_pred ecCCCEEEeccccchhcccC-cccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHH
Q psy3880 80 DDQMNVKLTDFGFARVLKKG-EKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMV 158 (408)
Q Consensus 80 ~~~~~iKl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~ 158 (408)
+.++.+||+|||+|...... ......+||+.|+|||++.+ ..++.++|+||+||++|+|++|..||.+.+.
T Consensus 130 ~~~~~~kL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DvwslG~il~ell~G~~Pf~~~~~-- 201 (316)
T cd05592 130 DKDGHIKIADFGMCKENMNGEGKASTFCGTPDYIAPEILKG------QKYNESVDWWSFGVLLYEMLIGQSPFHGEDE-- 201 (316)
T ss_pred CCCCCEEEccCcCCeECCCCCCccccccCCccccCHHHHcC------CCCCCcccchhHHHHHHHHHhCCCCCCCCCH--
Confidence 99999999999999754322 22345689999999999864 2356677777777777777777777654433
Q ss_pred HHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCC
Q psy3880 159 MLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKY 238 (408)
Q Consensus 159 ~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~ 238 (408)
..++..+.....
T Consensus 202 --------------------------------------------------------------------~~~~~~i~~~~~ 213 (316)
T cd05592 202 --------------------------------------------------------------------DELFDSILNDRP 213 (316)
T ss_pred --------------------------------------------------------------------HHHHHHHHcCCC
Confidence 223333333322
Q ss_pred CCCCCcCCCCCccHHHHHHHhcccCCCCCCCH-HHHHcCCCCCCC
Q psy3880 239 SFSSPEWNDISEDPKDLIRKLLIVTPEDRYSV-KEALNHSFFHPK 282 (408)
Q Consensus 239 ~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta-~e~L~Hpwf~~~ 282 (408)
.++ ..++.++++||++||..||++|+|+ .++++||||...
T Consensus 214 ~~~----~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~h~~~~~~ 254 (316)
T cd05592 214 HFP----RWISKEAKDCLSKLFERDPTKRLGVDGDIRQHPFFRGI 254 (316)
T ss_pred CCC----CCCCHHHHHHHHHHccCCHHHcCCChHHHHcCcccCCC
Confidence 222 2478899999999999999999986 588999999764
No 90
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=1.9e-34 Score=276.63 Aligned_cols=198 Identities=29% Similarity=0.502 Sum_probs=150.1
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhh---------CCHHHHHHHHHHHHHHHHHHHHCCCeeccCCC
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDII---------NSNPALRYIMRQLFEALEHVHNHSVVHRDLKP 74 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~---------~~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp 74 (408)
.+.|++ |+.+.+ +.++..|+||||+.||. |.+.+ .++..+..++.||+.||+|||++||+||||||
T Consensus 49 ~l~~~~-i~~~~~~~~~~~~~~lv~e~~~~g~--L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp 125 (280)
T cd05608 49 KVHSRF-IVSLAYAFQTKTDLCLVMTIMNGGD--LRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKP 125 (280)
T ss_pred hCCCCc-EeeeeEEEcCCCeEEEEEeCCCCCC--HHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCH
Confidence 456766 555543 44566789999999998 65543 24578899999999999999999999999999
Q ss_pred CcEEEecCCCEEEeccccchhcccCcc-cccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCC
Q psy3880 75 ENILLDDQMNVKLTDFGFARVLKKGEK-LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH 153 (408)
Q Consensus 75 ~NILl~~~~~iKl~DFGla~~~~~~~~-~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~ 153 (408)
+||+++.++.+||+|||++..+..... .....||+.|+|||++.. ..++.++|+||+||++|+|++|..||..
T Consensus 126 ~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~------~~~~~~~DvwslG~il~el~~g~~pf~~ 199 (280)
T cd05608 126 ENVLLDNDGNVRISDLGLAVELKDGQSKTKGYAGTPGFMAPELLQG------EEYDFSVDYFALGVTLYEMIAARGPFRA 199 (280)
T ss_pred HHEEECCCCCEEEeeCccceecCCCCccccccCCCcCccCHHHhcC------CCCCccccHHHHHHHHHHHHhCCCCCCC
Confidence 999999999999999999976654322 234679999999999864 3467788999999999999888888854
Q ss_pred chhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHH
Q psy3880 154 RKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI 233 (408)
Q Consensus 154 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i 233 (408)
...... .......+
T Consensus 200 ~~~~~~------------------------------------------------------------------~~~~~~~~ 213 (280)
T cd05608 200 RGEKVE------------------------------------------------------------------NKELKQRI 213 (280)
T ss_pred CCcchh------------------------------------------------------------------HHHHHHhh
Confidence 321100 00111122
Q ss_pred HhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCC-----CHHHHHcCCCCCCC
Q psy3880 234 MEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRY-----SVKEALNHSFFHPK 282 (408)
Q Consensus 234 ~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~-----ta~e~L~Hpwf~~~ 282 (408)
...... ....+|+++++|+.+||+.||++|+ |++++++||||+..
T Consensus 214 ~~~~~~----~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h~~~~~~ 263 (280)
T cd05608 214 LNDSVT----YPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTHPLFRDL 263 (280)
T ss_pred cccCCC----CcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcChhhhcC
Confidence 222211 1245799999999999999999999 89999999999764
No 91
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=2.1e-34 Score=281.87 Aligned_cols=194 Identities=34% Similarity=0.556 Sum_probs=145.3
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC-----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEE
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN-----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENIL 78 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~-----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NIL 78 (408)
.+.|+|+| .+.+ +..+..|+||||+.||+ |.+.+. .+.+++.++.||+.||+|||++||+||||||+|||
T Consensus 52 ~~~h~~iv-~~~~~~~~~~~~~lv~e~~~~~~--L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIl 128 (321)
T cd05603 52 NLKHPFLV-GLHYSFQTAEKLYFVLDYVNGGE--LFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENIL 128 (321)
T ss_pred hCCCCCcc-ceeeEEEcCCEEEEEEcCCCCCC--HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeE
Confidence 46788755 5543 45667899999999998 766553 45788999999999999999999999999999999
Q ss_pred EecCCCEEEeccccchhccc-CcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhH
Q psy3880 79 LDDQMNVKLTDFGFARVLKK-GEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 157 (408)
Q Consensus 79 l~~~~~iKl~DFGla~~~~~-~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~ 157 (408)
++.++.+||+|||+++.... .......+||+.|+|||++.. ..++.++|+||+||++|+|++|..||
T Consensus 129 l~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~el~~g~~pf------ 196 (321)
T cd05603 129 LDSQGHVVLTDFGLCKEGVEPEETTSTFCGTPEYLAPEVLRK------EPYDRTVDWWCLGAVLYEMLYGLPPF------ 196 (321)
T ss_pred ECCCCCEEEccCCCCccCCCCCCccccccCCcccCCHHHhcC------CCCCCcCcccccchhhhhhhcCCCCC------
Confidence 99999999999999875322 222345689999999998853 23445555555555555555555555
Q ss_pred HHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcC
Q psy3880 158 VMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 237 (408)
Q Consensus 158 ~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~ 237 (408)
...+...+...+....
T Consensus 197 ----------------------------------------------------------------~~~~~~~~~~~i~~~~ 212 (321)
T cd05603 197 ----------------------------------------------------------------YSRDVSQMYDNILHKP 212 (321)
T ss_pred ----------------------------------------------------------------CCCCHHHHHHHHhcCC
Confidence 4444344444555444
Q ss_pred CCCCCCcCCCCCccHHHHHHHhcccCCCCCCCH----HHHHcCCCCCCC
Q psy3880 238 YSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSV----KEALNHSFFHPK 282 (408)
Q Consensus 238 ~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta----~e~L~Hpwf~~~ 282 (408)
..++ ...+.++.+||.+||+.||.+|+++ .|+++||||...
T Consensus 213 ~~~~----~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~~~~~~~ 257 (321)
T cd05603 213 LQLP----GGKTVAACDLLVGLLHKDQRRRLGAKADFLEIKNHVFFSPI 257 (321)
T ss_pred CCCC----CCCCHHHHHHHHHHccCCHhhcCCCCCCHHHHhCCCCcCCC
Confidence 4333 2468899999999999999999975 599999999764
No 92
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=1.3e-34 Score=282.89 Aligned_cols=194 Identities=31% Similarity=0.580 Sum_probs=149.8
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC-----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEE
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN-----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENIL 78 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~-----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NIL 78 (408)
.+.|+|++ ++.+ +.++..|+||||+.+|+ |.+.+. ++.+++.++.||+.||+|||++||+||||||+|||
T Consensus 54 ~l~h~niv-~~~~~~~~~~~~~lv~e~~~~~~--L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil 130 (318)
T cd05582 54 EVNHPFIV-KLHYAFQTEGKLYLILDFLRGGD--LFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENIL 130 (318)
T ss_pred hCCCCCcc-cEEEEEEcCCEEEEEEcCCCCCc--HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeE
Confidence 46798855 5543 45567799999999998 877763 45889999999999999999999999999999999
Q ss_pred EecCCCEEEeccccchhcccC-cccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhH
Q psy3880 79 LDDQMNVKLTDFGFARVLKKG-EKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 157 (408)
Q Consensus 79 l~~~~~iKl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~ 157 (408)
++.++.+||+|||++...... ......+||+.|+|||++... .++.
T Consensus 131 ~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~------~~~~--------------------------- 177 (318)
T cd05582 131 LDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRR------GHTQ--------------------------- 177 (318)
T ss_pred ECCCCcEEEeeccCCcccCCCCCceecccCChhhcCHHHHcCC------CCCC---------------------------
Confidence 999999999999998765443 233457899999999988532 2333
Q ss_pred HHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcC
Q psy3880 158 VMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 237 (408)
Q Consensus 158 ~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~ 237 (408)
++|+||+||++|+|++|..||...........+....
T Consensus 178 -------------------------------------------~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~~ 214 (318)
T cd05582 178 -------------------------------------------SADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAK 214 (318)
T ss_pred -------------------------------------------ccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcCC
Confidence 4555555555555555666665555555555666555
Q ss_pred CCCCCCcCCCCCccHHHHHHHhcccCCCCCCC-----HHHHHcCCCCCCC
Q psy3880 238 YSFSSPEWNDISEDPKDLIRKLLIVTPEDRYS-----VKEALNHSFFHPK 282 (408)
Q Consensus 238 ~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~t-----a~e~L~Hpwf~~~ 282 (408)
..++ ..+++++++||++||+.||++||| ++++++||||...
T Consensus 215 ~~~p----~~~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~~~~~~~ 260 (318)
T cd05582 215 LGMP----QFLSPEAQSLLRALFKRNPANRLGAGPDGVEEIKRHPFFSTI 260 (318)
T ss_pred CCCC----CCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCCCCcCCC
Confidence 5443 247899999999999999999999 7789999999764
No 93
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=3.4e-34 Score=281.75 Aligned_cols=201 Identities=27% Similarity=0.536 Sum_probs=153.5
Q ss_pred ccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC-----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEe
Q psy3880 8 AHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN-----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLD 80 (408)
Q Consensus 8 ~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~-----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl~ 80 (408)
.|++++ .+.+ +.++..|+||||+.||+ |.+.+. ++..++.++.||+.||+|||++||+||||||+|||++
T Consensus 54 ~hp~Iv-~~~~~~~~~~~~~lv~e~~~~g~--L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~ 130 (329)
T cd05588 54 NHPFLV-GLHSCFQTESRLFFVIEFVSGGD--LMFHMQRQRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLD 130 (329)
T ss_pred CCCCCC-ceEEEEEcCCEEEEEEeCCCCCC--HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEC
Confidence 577755 5554 45567799999999998 776653 4588999999999999999999999999999999999
Q ss_pred cCCCEEEeccccchhc-ccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHHH
Q psy3880 81 DQMNVKLTDFGFARVL-KKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVM 159 (408)
Q Consensus 81 ~~~~iKl~DFGla~~~-~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~~ 159 (408)
.++.+||+|||+++.. .........+||+.|+|||++.+ ..++.++|+||+||++|+|++|..||......
T Consensus 131 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~-- 202 (329)
T cd05588 131 AEGHIKLTDYGMCKEGIRPGDTTSTFCGTPNYIAPEILRG------EDYGFSVDWWALGVLMFEMMAGRSPFDIVGMS-- 202 (329)
T ss_pred CCCCEEECcCccccccccCCCccccccCCccccCHHHHcC------CCCCCccceechHHHHHHHHHCCCCccccccc--
Confidence 9999999999998753 23333445789999999999864 35678899999999999999999998431100
Q ss_pred HHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCCC
Q psy3880 160 LRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYS 239 (408)
Q Consensus 160 ~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~~ 239 (408)
. .|. ........+.+......
T Consensus 203 -----------~-----------------------------------------------~~~-~~~~~~~~~~~~~~~~~ 223 (329)
T cd05588 203 -----------D-----------------------------------------------NPD-QNTEDYLFQVILEKQIR 223 (329)
T ss_pred -----------c-----------------------------------------------ccc-ccchHHHHHHHHcCCCC
Confidence 0 000 00111223344444444
Q ss_pred CCCCcCCCCCccHHHHHHHhcccCCCCCCC------HHHHHcCCCCCCC
Q psy3880 240 FSSPEWNDISEDPKDLIRKLLIVTPEDRYS------VKEALNHSFFHPK 282 (408)
Q Consensus 240 f~~~~~~~iS~~~~dLI~klL~~dP~~R~t------a~e~L~Hpwf~~~ 282 (408)
++ ..+|.++++||++||+.||.+|+| ++++++||||...
T Consensus 224 ~p----~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~~~~~ 268 (329)
T cd05588 224 IP----RSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFRNI 268 (329)
T ss_pred CC----CCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcCCCCCCC
Confidence 33 247899999999999999999997 7899999999653
No 94
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=2.2e-34 Score=281.61 Aligned_cols=193 Identities=28% Similarity=0.546 Sum_probs=148.3
Q ss_pred cccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC-----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEE
Q psy3880 7 VAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN-----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILL 79 (408)
Q Consensus 7 ~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~-----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl 79 (408)
+.|++++ .+.+ +.++..|+||||+.||. |.+.+. +..++..++.|++.||+|||++||+||||||+|||+
T Consensus 53 ~~hp~iv-~~~~~~~~~~~~~lv~ey~~~g~--L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~ 129 (316)
T cd05619 53 WEHPFLT-HLYCTFQTKENLFFVMEYLNGGD--LMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILL 129 (316)
T ss_pred cCCCcCc-ceEEEEEeCCEEEEEEeCCCCCc--HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEE
Confidence 4788755 5443 45567889999999998 777663 347889999999999999999999999999999999
Q ss_pred ecCCCEEEeccccchhccc-CcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHH
Q psy3880 80 DDQMNVKLTDFGFARVLKK-GEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMV 158 (408)
Q Consensus 80 ~~~~~iKl~DFGla~~~~~-~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~ 158 (408)
+.++.+||+|||++..... .......+||+.|+|||++.. ..++.++|+||+||++|+|++|..||.+.+.
T Consensus 130 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DvwslG~il~el~~G~~pf~~~~~-- 201 (316)
T cd05619 130 DTDGHIKIADFGMCKENMLGDAKTCTFCGTPDYIAPEILLG------QKYNTSVDWWSFGVLLYEMLIGQSPFHGHDE-- 201 (316)
T ss_pred CCCCCEEEccCCcceECCCCCCceeeecCCccccCHHHHcC------CCCCchhhhhhHHHHHHHHHhCCCCCCCCCH--
Confidence 9999999999999875322 223345689999999999864 3466777777777777777777777754332
Q ss_pred HHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCC
Q psy3880 159 MLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKY 238 (408)
Q Consensus 159 ~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~ 238 (408)
.++.+.+.....
T Consensus 202 --------------------------------------------------------------------~~~~~~i~~~~~ 213 (316)
T cd05619 202 --------------------------------------------------------------------EELFQSIRMDNP 213 (316)
T ss_pred --------------------------------------------------------------------HHHHHHHHhCCC
Confidence 222333333322
Q ss_pred CCCCCcCCCCCccHHHHHHHhcccCCCCCCCHH-HHHcCCCCCCC
Q psy3880 239 SFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVK-EALNHSFFHPK 282 (408)
Q Consensus 239 ~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~-e~L~Hpwf~~~ 282 (408)
.++ ..++.++++||.+||+.||++|+|+. ++++||||...
T Consensus 214 ~~~----~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~h~~~~~~ 254 (316)
T cd05619 214 CYP----RWLTREAKDILVKLFVREPERRLGVKGDIRQHPFFREI 254 (316)
T ss_pred CCC----ccCCHHHHHHHHHHhccCHhhcCCChHHHHcCcccCCC
Confidence 222 13688999999999999999999996 99999999764
No 95
>KOG0669|consensus
Probab=100.00 E-value=2.2e-33 Score=255.33 Aligned_cols=231 Identities=25% Similarity=0.445 Sum_probs=174.2
Q ss_pred ccccCCcEEEEec------cCC----cHHHHHHHHHhhchhhHHhhhC------CHHHHHHHHHHHHHHHHHHHHCCCee
Q psy3880 6 MVAHSRVVVRVKE------EGD----DLKHLAAQVVDKGEAAVQDIIN------SNPALRYIMRQLFEALEHVHNHSVVH 69 (408)
Q Consensus 6 ~~~~~~~i~~~~~------~~~----~~~~lv~e~~~~g~~~l~~~~~------~~~~~r~i~~qil~aL~~LH~~~IvH 69 (408)
.|.|+|++ .+.+ +.. ..+|+||++|... |+..+. +-.+++.+|++++.||.|+|.+.|+|
T Consensus 72 ~lkHenv~-nliEic~tk~Tp~~r~r~t~ylVf~~cehD---LaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilH 147 (376)
T KOG0669|consen 72 LLKHENVV-NLIEICRTKATPTNRDRATFYLVFDFCEHD---LAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNKILH 147 (376)
T ss_pred HhcchhHH-HHHHHHhhccCCcccccceeeeeHHHhhhh---HHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhhHHh
Confidence 46788743 4443 222 3479999999875 444443 23799999999999999999999999
Q ss_pred ccCCCCcEEEecCCCEEEeccccchhcccCcc-----cccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHH
Q psy3880 70 RDLKPENILLDDQMNVKLTDFGFARVLKKGEK-----LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTL 144 (408)
Q Consensus 70 RDLKp~NILl~~~~~iKl~DFGla~~~~~~~~-----~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~l 144 (408)
||+||+|+||+.++.+||+|||+|+.+...+. ....+.|.+|++||.+.+. ..|+++.|+|+.|||+.+|
T Consensus 148 RDmKaaNvLIt~dgilklADFGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~-----r~yg~~iDiWgAgCimaeM 222 (376)
T KOG0669|consen 148 RDMKAANVLITKDGILKLADFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGD-----REYGPPIDIWGAGCIMAEM 222 (376)
T ss_pred hcccHhhEEEcCCceEEeeccccccceecccccCCCCcccceeeeecCCHHHhhcc-----cccCCcchhHhHHHHHHHH
Confidence 99999999999999999999999987654332 2345679999999999874 6799999999999999999
Q ss_pred HhCCCCCCCchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCc
Q psy3880 145 LVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHR 224 (408)
Q Consensus 145 l~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~ 224 (408)
++|.+.|.+++++.++..|..-..++....|+....+ -+|.-+.- +| ...
T Consensus 223 wtrspimqgnteqqql~~Is~LcGs~tkevWP~~d~l----------------------------pL~~sie~-eP-l~~ 272 (376)
T KOG0669|consen 223 WTRSPIMQGNTEQQQLHLISQLCGSITKEVWPNVDNL----------------------------PLYQSIEL-EP-LPK 272 (376)
T ss_pred HccCccccCChHHHHHHHHHHHhccCCcccCCCcccc----------------------------hHHHhccC-CC-CCc
Confidence 9999999999999999988776666666666543221 11111111 22 223
Q ss_pred hhHHHHHHHHhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCCCC
Q psy3880 225 KQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLF 284 (408)
Q Consensus 225 ~~~~~~~~i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~~~ 284 (408)
.+...+.++++ .| .-.+++.||+.+||.+||.+|++++++|+|.||..+..
T Consensus 273 ~~~rkv~n~~k---p~------~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~kdp~ 323 (376)
T KOG0669|consen 273 GQKRKVKNRLK---PY------VKDDEALDLLEKLLKLDPTKRIDADQALNHDFFWKDPM 323 (376)
T ss_pred chhhhhhhhcc---cc------cCChhHHHHHHHHhccCcccCcchHhhhchhhhhcCCc
Confidence 33333333332 11 12678999999999999999999999999999987653
No 96
>KOG0596|consensus
Probab=100.00 E-value=5e-34 Score=282.92 Aligned_cols=203 Identities=28% Similarity=0.514 Sum_probs=150.2
Q ss_pred ccCCcEEEEec-cCCcHHHHHHHHHhhchhhHHhhhCCH----H--HHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEe
Q psy3880 8 AHSRVVVRVKE-EGDDLKHLAAQVVDKGEAAVQDIINSN----P--ALRYIMRQLFEALEHVHNHSVVHRDLKPENILLD 80 (408)
Q Consensus 8 ~~~~~i~~~~~-~~~~~~~lv~e~~~~g~~~l~~~~~~~----~--~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl~ 80 (408)
.|.++|.-+++ .++++.|+|||+ |+..|..+|... + .+++|.+|||.|+.++|.+||||.||||.|+|+-
T Consensus 418 g~~~IIqL~DYEv~d~~lYmvmE~---Gd~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlV 494 (677)
T KOG0596|consen 418 GHDKIIQLYDYEVTDGYLYMVMEC---GDIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLV 494 (677)
T ss_pred CCceEEEEeeeeccCceEEEEeec---ccccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEE
Confidence 46776644444 467789999996 555588887654 3 7999999999999999999999999999999986
Q ss_pred cCCCEEEeccccchhcccCcc---cccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhH
Q psy3880 81 DQMNVKLTDFGFARVLKKGEK---LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 157 (408)
Q Consensus 81 ~~~~iKl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~ 157 (408)
. |.+||+|||+|..+..++. -.+.+||+.||+||.+.........+ .
T Consensus 495 k-G~LKLIDFGIA~aI~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~--~--------------------------- 544 (677)
T KOG0596|consen 495 K-GRLKLIDFGIANAIQPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENG--K--------------------------- 544 (677)
T ss_pred e-eeEEeeeechhcccCccccceeeccccCcccccCHHHHhhccccccCC--C---------------------------
Confidence 4 7899999999988876542 23589999999999997643211000 0
Q ss_pred HHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCch-hHHHHHHHHhc
Q psy3880 158 VMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRK-QMVMLRNIMEG 236 (408)
Q Consensus 158 ~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~-~~~~~~~i~~~ 236 (408)
+ --..+.++||||||||+|.|+.|++||..-. ...-+..|..-
T Consensus 545 ---------------~---------------------k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~aKl~aI~~P 588 (677)
T KOG0596|consen 545 ---------------S---------------------KIKISRKSDVWSLGCILYQMVYGKTPFGQIINQIAKLHAITDP 588 (677)
T ss_pred ---------------c---------------------ceeecCccchhhhhhHHHHHHhcCCchHHHHHHHHHHHhhcCC
Confidence 0 0123557888888888888888888886543 33444555443
Q ss_pred CCCCCCCcCCCCC--ccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q psy3880 237 KYSFSSPEWNDIS--EDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPK 282 (408)
Q Consensus 237 ~~~f~~~~~~~iS--~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~ 282 (408)
... .+++.++ .++.|+++.||.+||.+|||+.|+|+|||.+..
T Consensus 589 ~~~---Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqhpFl~~~ 633 (677)
T KOG0596|consen 589 NHE---IEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQHPFLQIQ 633 (677)
T ss_pred Ccc---ccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcCcccccc
Confidence 221 1233333 238999999999999999999999999999874
No 97
>KOG0608|consensus
Probab=100.00 E-value=1.5e-34 Score=289.49 Aligned_cols=232 Identities=29% Similarity=0.476 Sum_probs=167.0
Q ss_pred ccCCcEEEEecc--CCcHHHHHHHHHhhchhhHHhhh-----CCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEe
Q psy3880 8 AHSRVVVRVKEE--GDDLKHLAAQVVDKGEAAVQDII-----NSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLD 80 (408)
Q Consensus 8 ~~~~~i~~~~~~--~~~~~~lv~e~~~~g~~~l~~~~-----~~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl~ 80 (408)
+.++|||++++. ++|..|+||||+.||+ +-..| ..+..+|+|+.++.+|+++.|+.|+|||||||+|||||
T Consensus 686 ADn~WVVrLyySFQDkdnLYFVMdYIPGGD--mMSLLIrmgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILID 763 (1034)
T KOG0608|consen 686 ADNEWVVRLYYSFQDKDNLYFVMDYIPGGD--MMSLLIRMGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILID 763 (1034)
T ss_pred cCCcceEEEEEEeccCCceEEEEeccCCcc--HHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEc
Confidence 458899999985 5578999999999998 55543 46689999999999999999999999999999999999
Q ss_pred cCCCEEEeccccchhcccCc--ccccCCCCC---ccc--ChhhhhhccccCcCCCCcchhhhh-hhHHHHHHHhCCCCCC
Q psy3880 81 DQMNVKLTDFGFARVLKKGE--KLMDLCGTP---GYL--APEVLRANMFEDATGYGQAVDVWA-CGVIMYTLLVGCPPFW 152 (408)
Q Consensus 81 ~~~~iKl~DFGla~~~~~~~--~~~~~~gt~---~y~--aPE~l~~~~~~~~~~~~~~~DiwS-lGvil~~ll~G~~pf~ 152 (408)
.+|+|||+|||||..+.-.. .... -|.. --| +||.- |+-+ +-++.
T Consensus 764 rdGHIKLTDFGLCTGfRWTHdskYYq-~gdH~RqDSmep~~e~~---------------d~~~~lkvL~----------- 816 (1034)
T KOG0608|consen 764 RDGHIKLTDFGLCTGFRWTHDSKYYQ-EGDHHRQDSMEPSPEWA---------------DISKCLKVLE----------- 816 (1034)
T ss_pred cCCceeeeeccccccceecccccccc-CCCccccccCCCchhhc---------------cccccchHHH-----------
Confidence 99999999999997653211 1111 1110 001 11110 0000 00100
Q ss_pred CchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHH
Q psy3880 153 HRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRN 232 (408)
Q Consensus 153 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~ 232 (408)
..-+...-+.......++..|++||++.. .+|++.||+||.|||||+|+.|.+||...+.-++..+
T Consensus 817 --------~ra~~~h~r~~ahslvgt~nyiapevl~r------~g~~q~cdwws~gvil~em~~g~~pf~~~tp~~tq~k 882 (1034)
T KOG0608|consen 817 --------RRAMRQHQRILAHSLVGTPNYIAPEVLAR------TGYTQLCDWWSVGVILYEMLVGQPPFLADTPGETQYK 882 (1034)
T ss_pred --------HHHHhhhhhhhhhhhcCCCcccChHHhcc------cCccccchhhHhhHHHHHHhhCCCCccCCCCCcceee
Confidence 00001111111223345677999999865 4788899999999999999999999998887777666
Q ss_pred HHhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCC---HHHHHcCCCCCCCC
Q psy3880 233 IMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYS---VKEALNHSFFHPKL 283 (408)
Q Consensus 233 i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~t---a~e~L~Hpwf~~~~ 283 (408)
|.+-.-....+.-.++|.||.|||.+|. -+++.|+. ++|+.+||||+...
T Consensus 883 v~nw~~~l~~~~~~~ls~e~~~li~kLc-~sad~RLGkng~d~vKaHpfFkgID 935 (1034)
T KOG0608|consen 883 VINWRNFLHIPYQGNLSKEALDLIQKLC-CSADSRLGKNGADQVKAHPFFKGID 935 (1034)
T ss_pred eeehhhccccccccccCHHHHHHHHHHh-cChhhhhcccchhhhhcCccccccc
Confidence 6655444444555689999999999975 58999995 88899999998754
No 98
>KOG0662|consensus
Probab=100.00 E-value=1.1e-33 Score=245.90 Aligned_cols=225 Identities=28% Similarity=0.462 Sum_probs=175.7
Q ss_pred cccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhCCH---HHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEec
Q psy3880 7 VAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIINSN---PALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDD 81 (408)
Q Consensus 7 ~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~~~---~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl~~ 81 (408)
|.|-| ||++.+ ..+...-+|+|+|+..-...||-++-. +.+|.+|.|++.||.|||++++.||||||.|+|++.
T Consensus 58 lkhkn-ivrl~dvlhsdkkltlvfe~cdqdlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ 136 (292)
T KOG0662|consen 58 LKHKN-IVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINR 136 (292)
T ss_pred hhhcc-eeehhhhhccCceeEEeHHHhhHHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEecc
Confidence 56777 668776 345566799999998766677777644 788999999999999999999999999999999999
Q ss_pred CCCEEEeccccchhcccCc-ccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHH-hCCCCCCCchhHHH
Q psy3880 82 QMNVKLTDFGFARVLKKGE-KLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLL-VGCPPFWHRKQMVM 159 (408)
Q Consensus 82 ~~~iKl~DFGla~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll-~G~~pf~~~~~~~~ 159 (408)
+|.+|++|||+|+.+.-.- ..+..+.|.+|++|.++.+ +.-|++..|+||.|||+.|+. .|.+.|.+.+-.++
T Consensus 137 ngelkladfglarafgipvrcysaevvtlwyrppdvlfg-----akly~tsidmwsagcifaelanagrplfpg~dvddq 211 (292)
T KOG0662|consen 137 NGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFG-----AKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQ 211 (292)
T ss_pred CCcEEecccchhhhcCCceEeeeceeeeeeccCcceeee-----eehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHH
Confidence 9999999999999876443 3445678999999999875 456899999999999999999 59999999999999
Q ss_pred HHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCCC
Q psy3880 160 LRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYS 239 (408)
Q Consensus 160 ~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~~ 239 (408)
+.+|..--.++....|+.+...-+ -..| |.+... ....+|+
T Consensus 212 lkrif~~lg~p~ed~wps~t~lpd-----------yk~y---------------------p~ypat--tswsqiv----- 252 (292)
T KOG0662|consen 212 LKRIFRLLGTPTEDQWPSMTKLPD-----------YKPY---------------------PIYPAT--TSWSQIV----- 252 (292)
T ss_pred HHHHHHHhCCCccccCCccccCCC-----------Cccc---------------------CCcccc--chHHHHh-----
Confidence 999987766666666655432100 0000 111000 0011111
Q ss_pred CCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q psy3880 240 FSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPK 282 (408)
Q Consensus 240 f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~ 282 (408)
+.++...+||++++|.-+|.+|++|+++|+||||...
T Consensus 253 ------p~lns~grdllqkll~cnp~qrisaeaalqhpyf~d~ 289 (292)
T KOG0662|consen 253 ------PKLNSTGRDLLQKLLKCNPAQRISAEAALQHPYFSDF 289 (292)
T ss_pred ------hhhcchhHHHHHHHhccCcccccCHHHHhcCcccccc
Confidence 3467788999999999999999999999999999764
No 99
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=1.1e-33 Score=271.09 Aligned_cols=199 Identities=32% Similarity=0.522 Sum_probs=152.4
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhh-------CCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCc
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDII-------NSNPALRYIMRQLFEALEHVHNHSVVHRDLKPEN 76 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~-------~~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~N 76 (408)
.+.|++++ .+.+ +.++..++||||+.||. |.+.+ .+.+.+..++.|++.||+|||++||+||||||+|
T Consensus 49 ~l~hp~i~-~~~~~~~~~~~~~lv~e~~~g~~--L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~N 125 (277)
T cd05607 49 KVNSPFIV-NLAYAFESKTHLCLVMSLMNGGD--LKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPEN 125 (277)
T ss_pred hcCCCcEE-EEEEEEecCCeEEEEEecCCCCC--HHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHh
Confidence 47898855 4443 45567899999999998 76655 2346778899999999999999999999999999
Q ss_pred EEEecCCCEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchh
Q psy3880 77 ILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQ 156 (408)
Q Consensus 77 ILl~~~~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~ 156 (408)
|+++.++.++|+|||++.............||+.|+|||++.. ..++.++|+||+||++|+|++|..||.+...
T Consensus 126 ili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~------~~~~~~~DvwslGv~l~el~~g~~p~~~~~~ 199 (277)
T cd05607 126 VLLDDQGNCRLSDLGLAVELKDGKTITQRAGTNGYMAPEILKE------EPYSYPVDWFAMGCSIYEMVAGRTPFKDHKE 199 (277)
T ss_pred EEEcCCCCEEEeeceeeeecCCCceeeccCCCCCccCHHHHcc------CCCCCchhHHHHHHHHHHHHhCCCCCCCCcc
Confidence 9999999999999999987655444445679999999999864 3477889999999999999999999854322
Q ss_pred HHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhc
Q psy3880 157 MVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEG 236 (408)
Q Consensus 157 ~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~ 236 (408)
.... ....+.+...
T Consensus 200 ~~~~------------------------------------------------------------------~~~~~~~~~~ 213 (277)
T cd05607 200 KVAK------------------------------------------------------------------EELKRRTLED 213 (277)
T ss_pred hhhH------------------------------------------------------------------HHHHHHhhcc
Confidence 1100 0111112212
Q ss_pred CCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCH----HHHHcCCCCCCC
Q psy3880 237 KYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSV----KEALNHSFFHPK 282 (408)
Q Consensus 237 ~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta----~e~L~Hpwf~~~ 282 (408)
...+. ...++++++|||++||+.||++|||+ +++++||||...
T Consensus 214 ~~~~~---~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~~h~~f~~~ 260 (277)
T cd05607 214 EVKFE---HQNFTEESKDICRLFLAKKPEDRLGSREKNDDPRKHEFFKTI 260 (277)
T ss_pred ccccc---cccCCHHHHHHHHHHhccCHhhCCCCccchhhhhcChhhcCC
Confidence 21111 13578899999999999999999999 778899999764
No 100
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=7.1e-34 Score=276.33 Aligned_cols=224 Identities=24% Similarity=0.402 Sum_probs=159.6
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhh------CCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcE
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDII------NSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENI 77 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~------~~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NI 77 (408)
.+.|+|++ ++.+ ..++..++||||+.++ |.+.+ .+...++.++.||+.||+|||++||+||||||+||
T Consensus 60 ~l~h~~iv-~~~~~~~~~~~~~lv~e~~~~~---l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Ni 135 (309)
T cd07872 60 DLKHANIV-TLHDIVHTDKSLTLVFEYLDKD---LKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNL 135 (309)
T ss_pred hCCCCCcc-eEEEEEeeCCeEEEEEeCCCCC---HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHE
Confidence 36788855 5544 4456788999999864 44443 34578899999999999999999999999999999
Q ss_pred EEecCCCEEEeccccchhcccCc-ccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchh
Q psy3880 78 LLDDQMNVKLTDFGFARVLKKGE-KLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQ 156 (408)
Q Consensus 78 Ll~~~~~iKl~DFGla~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~ 156 (408)
|++.++.+||+|||++....... ......+|+.|+|||++.+. ..++.++|+||+||++|+|++|..||.+.+.
T Consensus 136 ll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-----~~~~~~~DiwslG~il~el~tg~~pf~~~~~ 210 (309)
T cd07872 136 LINERGELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGS-----SEYSTQIDMWGVGCIFFEMASGRPLFPGSTV 210 (309)
T ss_pred EECCCCCEEECccccceecCCCccccccccccccccCCHHHhCC-----CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh
Confidence 99999999999999987643322 22345789999999998642 3578899999999999999999999998877
Q ss_pred HHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhc
Q psy3880 157 MVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEG 236 (408)
Q Consensus 157 ~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~ 236 (408)
.+.+..+...........|..+.. .... .....+++...
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~--------------------------~~~~~~~~~~~------------ 249 (309)
T cd07872 211 EDELHLIFRLLGTPTEETWPGISS---NDEF--------------------------KNYNFPKYKPQ------------ 249 (309)
T ss_pred HHHHHHHHHHhCCCCHHHHhhhcc---hhhh--------------------------hhhhcCccCCC------------
Confidence 666666554322222111111100 0000 00000111000
Q ss_pred CCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q psy3880 237 KYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPK 282 (408)
Q Consensus 237 ~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~ 282 (408)
........+|++++|||.+||+.||.+|+|++|+|+||||...
T Consensus 250 ---~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~ 292 (309)
T cd07872 250 ---PLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRSL 292 (309)
T ss_pred ---chhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhhhhc
Confidence 0001124578999999999999999999999999999999864
No 101
>KOG0589|consensus
Probab=100.00 E-value=2.7e-34 Score=284.31 Aligned_cols=194 Identities=28% Similarity=0.466 Sum_probs=165.5
Q ss_pred cccCCcEEEEec--cCCcH-HHHHHHHHhhchhhHHhhhC-------CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCc
Q psy3880 7 VAHSRVVVRVKE--EGDDL-KHLAAQVVDKGEAAVQDIIN-------SNPALRYIMRQLFEALEHVHNHSVVHRDLKPEN 76 (408)
Q Consensus 7 ~~~~~~i~~~~~--~~~~~-~~lv~e~~~~g~~~l~~~~~-------~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~N 76 (408)
+-||| ||.+++ +.++. .+|||+||+||+ +.+.|. .++.+..++.|++.||+|||+++|+|||||+.|
T Consensus 60 ~~hP~-iv~y~ds~~~~~~~l~Ivm~Y~eGg~--l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~N 136 (426)
T KOG0589|consen 60 LLHPN-IVEYKDSFEEDGQLLCIVMEYCEGGD--LAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCAN 136 (426)
T ss_pred ccCCC-eeeeccchhcCCceEEEEEeecCCCC--HHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhh
Confidence 56887 556665 34455 899999999998 766653 457899999999999999999999999999999
Q ss_pred EEEecCCCEEEeccccchhcccCc-ccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCch
Q psy3880 77 ILLDDQMNVKLTDFGFARVLKKGE-KLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRK 155 (408)
Q Consensus 77 ILl~~~~~iKl~DFGla~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~ 155 (408)
|+++.++.|||.|||+|+.+.+.. ...+..|||.|++||++.+ .+|+.++|||||||++|||++-+++|.+.+
T Consensus 137 ifltk~~~VkLgDfGlaK~l~~~~~~a~tvvGTp~YmcPEil~d------~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~ 210 (426)
T KOG0589|consen 137 IFLTKDKKVKLGDFGLAKILNPEDSLASTVVGTPYYMCPEILSD------IPYNEKSDIWSLGCCLYEMCTLKPAFKASN 210 (426)
T ss_pred hhccccCceeecchhhhhhcCCchhhhheecCCCcccCHHHhCC------CCCCccCcchhhcchHHHHHhcccccCccc
Confidence 999999999999999999998776 5567899999999999975 579999999999999999999999998888
Q ss_pred hHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHh
Q psy3880 156 QMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIME 235 (408)
Q Consensus 156 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~ 235 (408)
-..++.+|..+.+.+-
T Consensus 211 m~~Li~ki~~~~~~Pl---------------------------------------------------------------- 226 (426)
T KOG0589|consen 211 MSELILKINRGLYSPL---------------------------------------------------------------- 226 (426)
T ss_pred hHHHHHHHhhccCCCC----------------------------------------------------------------
Confidence 8777777766542211
Q ss_pred cCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q psy3880 236 GKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPK 282 (408)
Q Consensus 236 ~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~ 282 (408)
-...|.+.+.||+.||..+|..||||.++|.+|.....
T Consensus 227 ---------p~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~P~l~~~ 264 (426)
T KOG0589|consen 227 ---------PSMYSSELRSLVKSMLRKNPEHRPSALELLRRPHLLRY 264 (426)
T ss_pred ---------CccccHHHHHHHHHHhhcCCccCCCHHHHhhChhhhhH
Confidence 12348899999999999999999999999999988643
No 102
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=5.1e-34 Score=280.56 Aligned_cols=202 Identities=27% Similarity=0.514 Sum_probs=153.2
Q ss_pred cccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhh-----CCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEE
Q psy3880 7 VAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDII-----NSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILL 79 (408)
Q Consensus 7 ~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~-----~~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl 79 (408)
+.|+++| .+.+ ..++..|+||||+.+|+ |.+.+ .++..++.++.||+.||+|||++||+||||||+|||+
T Consensus 53 ~~hp~iv-~~~~~~~~~~~~~lv~E~~~~~~--L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili 129 (329)
T cd05618 53 SNHPFLV-GLHSCFQTESRLFFVIEYVNGGD--LMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLL 129 (329)
T ss_pred CCCCcCC-ceeeEEEeCCEEEEEEeCCCCCC--HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEE
Confidence 3677755 5554 45567899999999998 76654 3457889999999999999999999999999999999
Q ss_pred ecCCCEEEeccccchhcc-cCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHH
Q psy3880 80 DDQMNVKLTDFGFARVLK-KGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMV 158 (408)
Q Consensus 80 ~~~~~iKl~DFGla~~~~-~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~ 158 (408)
+.++.+||+|||+++... ........+||+.|+|||++.+ ..++.++|+||+||++|+|++|..||......
T Consensus 130 ~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~- 202 (329)
T cd05618 130 DSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRG------EDYGFSVDWWALGVLMFEMMAGRSPFDIVGSS- 202 (329)
T ss_pred CCCCCEEEeeCCccccccCCCCccccccCCccccCHHHHcC------CCCCCccceecccHHHHHHhhCCCCCccCCCc-
Confidence 999999999999987532 2233345789999999999864 35678899999999999999999988421100
Q ss_pred HHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCC
Q psy3880 159 MLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKY 238 (408)
Q Consensus 159 ~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~ 238 (408)
. .| ...........+.....
T Consensus 203 ------------~-----------------------------------------------~~-~~~~~~~~~~~i~~~~~ 222 (329)
T cd05618 203 ------------D-----------------------------------------------NP-DQNTEDYLFQVILEKQI 222 (329)
T ss_pred ------------C-----------------------------------------------Cc-ccccHHHHHHHHhcCCC
Confidence 0 00 00111123334444444
Q ss_pred CCCCCcCCCCCccHHHHHHHhcccCCCCCCC------HHHHHcCCCCCCC
Q psy3880 239 SFSSPEWNDISEDPKDLIRKLLIVTPEDRYS------VKEALNHSFFHPK 282 (408)
Q Consensus 239 ~f~~~~~~~iS~~~~dLI~klL~~dP~~R~t------a~e~L~Hpwf~~~ 282 (408)
.++ ..++.++++||++||+.||++|+| ++++++||||...
T Consensus 223 ~~p----~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~f~~~ 268 (329)
T cd05618 223 RIP----RSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNV 268 (329)
T ss_pred CCC----CCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcCCCCCCC
Confidence 443 357899999999999999999998 4799999999764
No 103
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=3.6e-34 Score=280.08 Aligned_cols=192 Identities=29% Similarity=0.590 Sum_probs=148.6
Q ss_pred ccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC-----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEe
Q psy3880 8 AHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN-----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLD 80 (408)
Q Consensus 8 ~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~-----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl~ 80 (408)
.|++ |+.+.+ +..+..|+||||+.||. |.+.+. ++..+..++.||+.||.|||++||+||||||+|||++
T Consensus 54 ~h~~-i~~~~~~~~~~~~~~lv~e~~~~~~--L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~ 130 (318)
T cd05570 54 KHPF-LTQLHSCFQTKDRLFFVMEYVNGGD--LMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLD 130 (318)
T ss_pred CCCC-ccceeeEEEcCCEEEEEEcCCCCCC--HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEEC
Confidence 5776 556554 45667899999999998 766653 4578899999999999999999999999999999999
Q ss_pred cCCCEEEeccccchhcc-cCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHHH
Q psy3880 81 DQMNVKLTDFGFARVLK-KGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVM 159 (408)
Q Consensus 81 ~~~~iKl~DFGla~~~~-~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~~ 159 (408)
.++.+||+|||++.... ........+||+.|+|||++.+ ..++.++|+||+||++|+|++|..||.+.+.
T Consensus 131 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~------~~~~~~~DiwslGvil~~l~~G~~pf~~~~~--- 201 (318)
T cd05570 131 SEGHIKIADFGMCKEGILGGVTTSTFCGTPDYIAPEILSY------QPYGPAVDWWALGVLLYEMLAGQSPFEGDDE--- 201 (318)
T ss_pred CCCcEEecccCCCeecCcCCCcccceecCccccCHHHhcC------CCCCcchhhhhHHHHHHHHhhCCCCCCCCCH---
Confidence 99999999999986532 2222344679999999999864 3456677777777777777777777754332
Q ss_pred HHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCCC
Q psy3880 160 LRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYS 239 (408)
Q Consensus 160 ~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~~ 239 (408)
......+......
T Consensus 202 -------------------------------------------------------------------~~~~~~i~~~~~~ 214 (318)
T cd05570 202 -------------------------------------------------------------------DELFQSILEDEVR 214 (318)
T ss_pred -------------------------------------------------------------------HHHHHHHHcCCCC
Confidence 2233334333333
Q ss_pred CCCCcCCCCCccHHHHHHHhcccCCCCCCCH-----HHHHcCCCCCCC
Q psy3880 240 FSSPEWNDISEDPKDLIRKLLIVTPEDRYSV-----KEALNHSFFHPK 282 (408)
Q Consensus 240 f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta-----~e~L~Hpwf~~~ 282 (408)
++ ..+++++++||++||+.||++|||+ .++++||||...
T Consensus 215 ~~----~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~~~~~~~ 258 (318)
T cd05570 215 YP----RWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGHPFFREI 258 (318)
T ss_pred CC----CcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence 32 2478999999999999999999999 999999999764
No 104
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=7e-34 Score=280.52 Aligned_cols=224 Identities=27% Similarity=0.446 Sum_probs=157.5
Q ss_pred ccccCCcEEEEeccC--------CcHHHHHHHHHhhchhhHHhhh----CCHHHHHHHHHHHHHHHHHHHHCCCeeccCC
Q psy3880 6 MVAHSRVVVRVKEEG--------DDLKHLAAQVVDKGEAAVQDII----NSNPALRYIMRQLFEALEHVHNHSVVHRDLK 73 (408)
Q Consensus 6 ~~~~~~~i~~~~~~~--------~~~~~lv~e~~~~g~~~l~~~~----~~~~~~r~i~~qil~aL~~LH~~~IvHRDLK 73 (408)
.+.|+|+| .+.+.. ....|++++++ ++. |.+.+ .+..+++.++.||+.||+|||++||+|||||
T Consensus 70 ~l~h~~iv-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdik 145 (343)
T cd07878 70 HMKHENVI-GLLDVFTPATSIENFNEVYLVTNLM-GAD--LNNIVKCQKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLK 145 (343)
T ss_pred hcCCCchh-hhhhhhcccccccccCcEEEEeecC-CCC--HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecccCC
Confidence 46788755 544311 13357888887 555 55554 3568899999999999999999999999999
Q ss_pred CCcEEEecCCCEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCC
Q psy3880 74 PENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH 153 (408)
Q Consensus 74 p~NILl~~~~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~ 153 (408)
|+|||++.++.+||+|||++...... ....+||+.|+|||++... ..++.++|+||+||++|+|++|..||.+
T Consensus 146 p~Nil~~~~~~~kl~Dfg~~~~~~~~--~~~~~~t~~y~aPE~~~~~-----~~~~~~~DiwslG~il~el~~g~~pf~~ 218 (343)
T cd07878 146 PSNVAVNEDCELRILDFGLARQADDE--MTGYVATRWYRAPEIMLNW-----MHYNQTVDIWSVGCIMAELLKGKALFPG 218 (343)
T ss_pred hhhEEECCCCCEEEcCCccceecCCC--cCCccccccccCchHhcCC-----ccCCchhhhHhHHHHHHHHHHCCCCCCC
Confidence 99999999999999999999865432 3456899999999998642 3578899999999999999999999998
Q ss_pred chhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHH
Q psy3880 154 RKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI 233 (408)
Q Consensus 154 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i 233 (408)
.+....+..+....... .++.+..- .+-..--+ + ...|..... .+
T Consensus 219 ~~~~~~~~~~~~~~~~~------------~~~~~~~~--------------~~~~~~~~--~-~~~~~~~~~---~~--- 263 (343)
T cd07878 219 NDYIDQLKRIMEVVGTP------------SPEVLKKI--------------SSEHARKY--I-QSLPHMPQQ---DL--- 263 (343)
T ss_pred CCHHHHHHHHHHHhCCC------------CHHHHHhc--------------chhhHHHH--h-hccccccch---hH---
Confidence 87777666665432111 11111100 00000000 0 000000000 00
Q ss_pred HhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCCC
Q psy3880 234 MEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKL 283 (408)
Q Consensus 234 ~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~~ 283 (408)
...+...++.++|||.+||+.||++|||+.|+|+||||....
T Consensus 264 --------~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~~~~~~ 305 (343)
T cd07878 264 --------KKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPYFSQYH 305 (343)
T ss_pred --------HHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhccC
Confidence 011235678899999999999999999999999999998643
No 105
>KOG0665|consensus
Probab=100.00 E-value=8.6e-34 Score=265.64 Aligned_cols=226 Identities=25% Similarity=0.413 Sum_probs=163.8
Q ss_pred ccccCCcEEEEeccC--------CcHHHHHHHHHhhchhhHHhhhC---CHHHHHHHHHHHHHHHHHHHHCCCeeccCCC
Q psy3880 6 MVAHSRVVVRVKEEG--------DDLKHLAAQVVDKGEAAVQDIIN---SNPALRYIMRQLFEALEHVHNHSVVHRDLKP 74 (408)
Q Consensus 6 ~~~~~~~i~~~~~~~--------~~~~~lv~e~~~~g~~~l~~~~~---~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp 74 (408)
.+.|.|+| .+.... -...|+|||+|+.. |...+. ....+++++.|++.|++|||+.||+||||||
T Consensus 71 ~v~~~nii-~l~n~ftP~~~l~~~~e~y~v~e~m~~n---l~~vi~~elDH~tis~i~yq~~~~ik~lhs~~IihRdLkP 146 (369)
T KOG0665|consen 71 CVNHKNII-SLLNVFTPQKTLEEFQEVYLVMELMDAN---LCQVILMELDHETISYILYQMLCGIKHLHSAGIIHRDLKP 146 (369)
T ss_pred hhccccee-eeeeccCccccHHHHHhHHHHHHhhhhH---HHHHHHHhcchHHHHHHHHHHHHHHHHHHhcceeecccCc
Confidence 46788866 444321 12369999999876 333332 3489999999999999999999999999999
Q ss_pred CcEEEecCCCEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCc
Q psy3880 75 ENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHR 154 (408)
Q Consensus 75 ~NILl~~~~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~ 154 (408)
+||++..++.+||.|||+|+.-...-..+.++.|.+|+|||++.+ .+|...+||||+||++.||++|+..|.+.
T Consensus 147 snivv~~~~~lKi~dfg~ar~e~~~~~mtpyVvtRyyrapevil~------~~~ke~vdiwSvGci~gEli~~~Vlf~g~ 220 (369)
T KOG0665|consen 147 SNIVVNSDCTLKILDFGLARTEDTDFMMTPYVVTRYYRAPEVILG------MGYKENVDIWSVGCIMGELILGTVLFPGK 220 (369)
T ss_pred ccceecchhheeeccchhhcccCcccccCchhheeeccCchheec------cCCcccchhhhhhhHHHHHhhceEEecCc
Confidence 999999999999999999987666555677899999999999986 34889999999999999999999999999
Q ss_pred hhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHH
Q psy3880 155 KQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIM 234 (408)
Q Consensus 155 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~ 234 (408)
+..++..+|.+....++. .+...+. +.|-+... ..+-+...+-.+
T Consensus 221 d~idQ~~ki~~~lgtpd~-------------~F~~qL~-------------~~~r~yv~---~~~~y~~~~f~~------ 265 (369)
T KOG0665|consen 221 DHIDQWNKIIEQLGTPDP-------------SFMKQLQ-------------PTVRNYVE---NRPQYQAISFSE------ 265 (369)
T ss_pred hHHHHHHHHHHHhcCCCH-------------HHHHHhh-------------HHHHHHhh---cChHhhccchhh------
Confidence 999998888764333221 1111110 00101000 000000000000
Q ss_pred hcCCCCCCCcCC-------CCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCC
Q psy3880 235 EGKYSFSSPEWN-------DISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFH 280 (408)
Q Consensus 235 ~~~~~f~~~~~~-------~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~ 280 (408)
.|+...|. .-+..|+||+.+||+.||++|+|+++||+||||+
T Consensus 266 ----~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HPY~~ 314 (369)
T KOG0665|consen 266 ----LFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHPYIK 314 (369)
T ss_pred ----hCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCCeee
Confidence 12222221 2245789999999999999999999999999996
No 106
>KOG0666|consensus
Probab=100.00 E-value=4.7e-34 Score=266.33 Aligned_cols=227 Identities=30% Similarity=0.447 Sum_probs=169.2
Q ss_pred cccCCcE--EEEeccCCcHHHHHHHHHhhchhhHHhhhC----------CHHHHHHHHHHHHHHHHHHHHCCCeeccCCC
Q psy3880 7 VAHSRVV--VRVKEEGDDLKHLAAQVVDKGEAAVQDIIN----------SNPALRYIMRQLFEALEHVHNHSVVHRDLKP 74 (408)
Q Consensus 7 ~~~~~~i--~~~~~~~~~~~~lv~e~~~~g~~~l~~~~~----------~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp 74 (408)
+.|+|+| |++.-+.+...++++||++.. |..+|. ...-++.+++||+.|++|||++=|+||||||
T Consensus 84 l~h~nvi~Lv~Vfl~~d~~v~l~fdYAEhD---L~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKP 160 (438)
T KOG0666|consen 84 LKHPNVISLVKVFLSHDKKVWLLFDYAEHD---LWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKP 160 (438)
T ss_pred hcCCcchhHHHHHhccCceEEEEehhhhhh---HHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCc
Confidence 5688866 233345577789999999765 555542 1257899999999999999999999999999
Q ss_pred CcEEEecC----CCEEEeccccchhcccCc-c---cccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHh
Q psy3880 75 ENILLDDQ----MNVKLTDFGFARVLKKGE-K---LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV 146 (408)
Q Consensus 75 ~NILl~~~----~~iKl~DFGla~~~~~~~-~---~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~ 146 (408)
.|||+..+ |.+||+|||+|+.+...- . ....+.|.+|+|||.+.+ +..|++++|+||.|||+.||++
T Consensus 161 aNIlvmgdgperG~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLG-----a~hYT~AiDvWAiGCIfaElLt 235 (438)
T KOG0666|consen 161 ANILVMGDGPERGRVKIADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLG-----ARHYTKAIDVWAIGCIFAELLT 235 (438)
T ss_pred ceEEEeccCCccCeeEeecccHHHHhhccccccccCCceEEEEEecChHHhcc-----cccccchhhhHHHHHHHHHHHc
Confidence 99999877 899999999999876432 2 223677999999999986 4789999999999999999999
Q ss_pred CCCCCCCch---------hHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcC
Q psy3880 147 GCPPFWHRK---------QMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVG 217 (408)
Q Consensus 147 G~~pf~~~~---------~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g 217 (408)
-.+.|.+.. +.+++.+|.+--..++...|+++..+ ||--
T Consensus 236 l~PlF~g~E~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~--Pe~q------------------------------ 283 (438)
T KOG0666|consen 236 LEPLFKGREEKIKTKNPFQHDQLDRIFEVLGTPTDKDWPDLKKM--PEYQ------------------------------ 283 (438)
T ss_pred cCccccchhhhcccCCCchHHHHHHHHHHcCCCccccchhhhhC--cchH------------------------------
Confidence 999998753 34677777776666666666655432 2210
Q ss_pred CCCCCCchhHHHHHHHHhcCCCCC-----CCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCCC
Q psy3880 218 CPPFWHRKQMVMLRNIMEGKYSFS-----SPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKL 283 (408)
Q Consensus 218 ~~Pf~~~~~~~~~~~i~~~~~~f~-----~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~~ 283 (408)
..+..+....+.-- ...|..-|+.+.||+.+||++||.+|+||++||+|+||....
T Consensus 284 ----------~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~yF~~d~ 344 (438)
T KOG0666|consen 284 ----------TLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHPYFTEDP 344 (438)
T ss_pred ----------HHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhcccccccCC
Confidence 00000000000000 012344577799999999999999999999999999998764
No 107
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=7.6e-34 Score=278.99 Aligned_cols=199 Identities=27% Similarity=0.517 Sum_probs=151.6
Q ss_pred ccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC-----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEe
Q psy3880 8 AHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN-----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLD 80 (408)
Q Consensus 8 ~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~-----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl~ 80 (408)
.|++ |+.+.+ +..+..|+||||+.||+ |.+.+. ++.+++.++.||+.||+|||++||+||||||+|||++
T Consensus 54 ~~~~-i~~~~~~~~~~~~~~lv~e~~~~~~--L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~ 130 (327)
T cd05617 54 SNPF-LVGLHSCFQTTSRLFLVIEYVNGGD--LMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLD 130 (327)
T ss_pred CCCC-EeeEEEEEEeCCEEEEEEeCCCCCc--HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEe
Confidence 4554 666665 44566899999999998 766553 4588999999999999999999999999999999999
Q ss_pred cCCCEEEeccccchhcc-cCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHHH
Q psy3880 81 DQMNVKLTDFGFARVLK-KGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVM 159 (408)
Q Consensus 81 ~~~~iKl~DFGla~~~~-~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~~ 159 (408)
.++.+||+|||++.... ........+||+.|+|||++.. ..|+.++|+||+||++|+|++|..||......
T Consensus 131 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslGvil~ell~g~~pf~~~~~~-- 202 (327)
T cd05617 131 ADGHIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRG------EEYGFSVDWWALGVLMFEMMAGRSPFDIITDN-- 202 (327)
T ss_pred CCCCEEEeccccceeccCCCCceecccCCcccCCHHHHCC------CCCCchheeehhHHHHHHHHhCCCCCCccCCC--
Confidence 99999999999987532 2333445789999999999864 35678899999999999999998888432100
Q ss_pred HHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCCC
Q psy3880 160 LRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYS 239 (408)
Q Consensus 160 ~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~~ 239 (408)
+. ..........+......
T Consensus 203 ------------------------------------------------------------~~-~~~~~~~~~~~~~~~~~ 221 (327)
T cd05617 203 ------------------------------------------------------------PD-MNTEDYLFQVILEKPIR 221 (327)
T ss_pred ------------------------------------------------------------cc-cccHHHHHHHHHhCCCC
Confidence 00 00111223334444333
Q ss_pred CCCCcCCCCCccHHHHHHHhcccCCCCCCC------HHHHHcCCCCCCC
Q psy3880 240 FSSPEWNDISEDPKDLIRKLLIVTPEDRYS------VKEALNHSFFHPK 282 (408)
Q Consensus 240 f~~~~~~~iS~~~~dLI~klL~~dP~~R~t------a~e~L~Hpwf~~~ 282 (408)
++ ..+|.++++||++||..||++|+| .+++++||||...
T Consensus 222 ~p----~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~~f~~~ 266 (327)
T cd05617 222 IP----RFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSHTFFRSI 266 (327)
T ss_pred CC----CCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcCCCCCCC
Confidence 32 357899999999999999999998 4699999999864
No 108
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=8.3e-34 Score=292.99 Aligned_cols=194 Identities=31% Similarity=0.498 Sum_probs=156.3
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhh---------CCHHHHHHHHHHHHHHHHHHHHCCCeeccCCC
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDII---------NSNPALRYIMRQLFEALEHVHNHSVVHRDLKP 74 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~---------~~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp 74 (408)
.+.|+|+| ++.+ +.++..||||||+.||. |.+.+ .++.++..++.||+.||+|||++||+||||||
T Consensus 121 ~l~Hpniv-~~~~~~~~~~~~~lv~E~~~gg~--L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp 197 (478)
T PTZ00267 121 ACDHFGIV-KHFDDFKSDDKLLLIMEYGSGGD--LNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKS 197 (478)
T ss_pred hCCCCCEe-EEEEEEEECCEEEEEEECCCCCC--HHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCH
Confidence 47899855 5554 45567899999999998 76544 24578899999999999999999999999999
Q ss_pred CcEEEecCCCEEEeccccchhcccCcc---cccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCC
Q psy3880 75 ENILLDDQMNVKLTDFGFARVLKKGEK---LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151 (408)
Q Consensus 75 ~NILl~~~~~iKl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf 151 (408)
+|||++.++.+||+|||+++.+..... ....+||+.|+|||++.. ..++.++|+||+||++|+|++|..||
T Consensus 198 ~NIll~~~~~~kL~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~Dv~slG~~l~el~tg~~Pf 271 (478)
T PTZ00267 198 ANIFLMPTGIIKLGDFGFSKQYSDSVSLDVASSFCGTPYYLAPELWER------KRYSKKADMWSLGVILYELLTLHRPF 271 (478)
T ss_pred HhEEECCCCcEEEEeCcCceecCCccccccccccCCCccccCHhHhCC------CCCCcHHhHHHHHHHHHHHHhCCCCC
Confidence 999999999999999999987654322 234679999999999864 45788999999999999999999999
Q ss_pred CCchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHH
Q psy3880 152 WHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLR 231 (408)
Q Consensus 152 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~ 231 (408)
.+.+..+.+..+..+.
T Consensus 272 ~~~~~~~~~~~~~~~~---------------------------------------------------------------- 287 (478)
T PTZ00267 272 KGPSQREIMQQVLYGK---------------------------------------------------------------- 287 (478)
T ss_pred CCCCHHHHHHHHHhCC----------------------------------------------------------------
Confidence 7665554444443321
Q ss_pred HHHhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCC
Q psy3880 232 NIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHP 281 (408)
Q Consensus 232 ~i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~ 281 (408)
+. +....+|+++++||.+||..||++|||++++|+|||+..
T Consensus 288 ------~~---~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~~~~~~ 328 (478)
T PTZ00267 288 ------YD---PFPCPVSSGMKALLDPLLSKNPALRPTTQQLLHTEFLKY 328 (478)
T ss_pred ------CC---CCCccCCHHHHHHHHHHhccChhhCcCHHHHHhCHHHHH
Confidence 11 001246889999999999999999999999999999854
No 109
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=1.8e-33 Score=276.77 Aligned_cols=203 Identities=29% Similarity=0.520 Sum_probs=156.0
Q ss_pred cccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC------CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEE
Q psy3880 7 VAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN------SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENIL 78 (408)
Q Consensus 7 ~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~------~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NIL 78 (408)
+.|++ |+.+.+ +..+..|+||||+.||. |.+.+. ++..++.++.||+.||+|||++||+||||||+|||
T Consensus 58 ~~~~~-i~~~~~~~~~~~~~~lv~ey~~~g~--L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nil 134 (332)
T cd05623 58 GDNQW-ITTLHYAFQDENNLYLVMDYYVGGD--LLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNIL 134 (332)
T ss_pred CCCCC-EeeEEEEEecCCEEEEEEeccCCCc--HHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEE
Confidence 45665 556554 45567899999999998 877763 34688999999999999999999999999999999
Q ss_pred EecCCCEEEeccccchhcccCcc--cccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchh
Q psy3880 79 LDDQMNVKLTDFGFARVLKKGEK--LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQ 156 (408)
Q Consensus 79 l~~~~~iKl~DFGla~~~~~~~~--~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~ 156 (408)
++.++.+||+|||++..+..... ....+||+.|+|||++.... .....++.++|+||+||++|+|++|..||...+.
T Consensus 135 i~~~~~~kL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~ 213 (332)
T cd05623 135 MDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAME-DGKGKYGPECDWWSLGVCMYEMLYGETPFYAESL 213 (332)
T ss_pred ECCCCCEEEeecchheecccCCcceecccccCccccCHHHHhccc-cCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCH
Confidence 99999999999999876543222 22367999999999986421 1123578899999999999999999999987766
Q ss_pred HHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhc
Q psy3880 157 MVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEG 236 (408)
Q Consensus 157 ~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~ 236 (408)
.+...++......
T Consensus 214 ~~~~~~i~~~~~~------------------------------------------------------------------- 226 (332)
T cd05623 214 VETYGKIMNHKER------------------------------------------------------------------- 226 (332)
T ss_pred HHHHHHHhCCCcc-------------------------------------------------------------------
Confidence 5555554432110
Q ss_pred CCCCCCCcCCCCCccHHHHHHHhcccCCCC--CCCHHHHHcCCCCCCC
Q psy3880 237 KYSFSSPEWNDISEDPKDLIRKLLIVTPED--RYSVKEALNHSFFHPK 282 (408)
Q Consensus 237 ~~~f~~~~~~~iS~~~~dLI~klL~~dP~~--R~ta~e~L~Hpwf~~~ 282 (408)
..++ ..+..+|++++|||++||+.+|.+ |+|++|+++||||...
T Consensus 227 -~~~p-~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h~~f~~~ 272 (332)
T cd05623 227 -FQFP-AQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQHPFFTGI 272 (332)
T ss_pred -ccCC-CccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCCCCcCCC
Confidence 0111 112457999999999999876655 6899999999999764
No 110
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=1.9e-33 Score=280.87 Aligned_cols=226 Identities=25% Similarity=0.414 Sum_probs=158.3
Q ss_pred ccccCCcEEEEec--cCCc-----HHHHHHHHHhhchhhHHhhhC-----CHHHHHHHHHHHHHHHHHHHHCCCeeccCC
Q psy3880 6 MVAHSRVVVRVKE--EGDD-----LKHLAAQVVDKGEAAVQDIIN-----SNPALRYIMRQLFEALEHVHNHSVVHRDLK 73 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~-----~~~lv~e~~~~g~~~l~~~~~-----~~~~~r~i~~qil~aL~~LH~~~IvHRDLK 73 (408)
.+.|+|+| .+.+ ...+ ..|+|+||+.++ |.+.+. +...++.++.||+.||+|||++||+|||||
T Consensus 55 ~l~h~niv-~~~~~~~~~~~~~~~~~~lv~e~~~~~---l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlk 130 (372)
T cd07853 55 FFKHDNVL-SALDILQPPHIDPFEEIYVVTELMQSD---LHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIK 130 (372)
T ss_pred hCCCCCcC-CHhheecCCCccccceEEEEeeccccC---HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCC
Confidence 46788865 4433 1222 468999999754 555442 457899999999999999999999999999
Q ss_pred CCcEEEecCCCEEEeccccchhcccCc--ccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCC
Q psy3880 74 PENILLDDQMNVKLTDFGFARVLKKGE--KLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151 (408)
Q Consensus 74 p~NILl~~~~~iKl~DFGla~~~~~~~--~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf 151 (408)
|+|||++.++.+||+|||++....... ......+|+.|+|||++.+. ..|+.++|+||+||++|+|++|+.||
T Consensus 131 p~Nili~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-----~~~~~~~DiwslG~il~el~~g~~pf 205 (372)
T cd07853 131 PGNLLVNSNCVLKICDFGLARVEEPDESKHMTQEVVTQYYRAPEILMGS-----RHYTSAVDIWSVGCIFAELLGRRILF 205 (372)
T ss_pred hHHEEECCCCCEEeccccceeecccCccccCCCCCcCCCcCCHHHHcCC-----CCCCcHHHHHhHHHHHHHHHcCCCCC
Confidence 999999999999999999997654322 22345689999999998642 34788999999999999999999999
Q ss_pred CCchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHH
Q psy3880 152 WHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLR 231 (408)
Q Consensus 152 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~ 231 (408)
.+.+....+..|....... .++.+... .. +. ...++.. |.......
T Consensus 206 ~~~~~~~~~~~i~~~~g~~------------~~~~~~~~-----------~~----~~-~~~~~~~--~~~~~~~~---- 251 (372)
T cd07853 206 QAQSPIQQLDLITDLLGTP------------SLEAMRSA-----------CE----GA-RAHILRG--PHKPPSLP---- 251 (372)
T ss_pred CCCCHHHHHHHHHHHcCCC------------CHHHHHHh-----------hH----HH-HHHHHhC--CCCCCchH----
Confidence 9988877777765422111 11111100 00 00 0001110 00000000
Q ss_pred HHHhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q psy3880 232 NIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPK 282 (408)
Q Consensus 232 ~i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~ 282 (408)
..+ ......++++++||.+||+.||++|||++|+|+||||...
T Consensus 252 ----~~~----~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~ 294 (372)
T cd07853 252 ----VLY----TLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPYLDEG 294 (372)
T ss_pred ----Hhc----ccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHhhCCC
Confidence 000 1123468899999999999999999999999999999864
No 111
>KOG0577|consensus
Probab=100.00 E-value=5.7e-33 Score=276.57 Aligned_cols=201 Identities=27% Similarity=0.445 Sum_probs=163.4
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC---CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEe
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN---SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLD 80 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~---~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl~ 80 (408)
.|.|||.| .++. -.+...+||||||-|--..|.+... .+-++..|..+.|.||.|||+++.||||||..|||++
T Consensus 82 ~l~HPnti-eYkgCyLre~TaWLVMEYClGSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLs 160 (948)
T KOG0577|consen 82 QLRHPNTI-EYKGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLS 160 (948)
T ss_pred hccCCCcc-cccceeeccchHHHHHHHHhccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEec
Confidence 47899855 5553 3355789999999987544555543 2468899999999999999999999999999999999
Q ss_pred cCCCEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHHHH
Q psy3880 81 DQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVML 160 (408)
Q Consensus 81 ~~~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~~~ 160 (408)
+.|.|||+|||.|....+. .+++|||+|||||++... +...|+-++||||||+++.+|...++|.++.+-...+
T Consensus 161 e~g~VKLaDFGSAsi~~PA---nsFvGTPywMAPEVILAM---DEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSAL 234 (948)
T KOG0577|consen 161 EPGLVKLADFGSASIMAPA---NSFVGTPYWMAPEVILAM---DEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSAL 234 (948)
T ss_pred CCCeeeeccccchhhcCch---hcccCCccccchhHheec---cccccCCccceeeccchhhhhhhcCCCccCchHHHHH
Confidence 9999999999999887653 468999999999999753 2357899999999999999999999998887766665
Q ss_pred HHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCCCC
Q psy3880 161 RNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240 (408)
Q Consensus 161 ~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~~f 240 (408)
..|.+.. .+..
T Consensus 235 YHIAQNe---------------------------------------------------------------------sPtL 245 (948)
T KOG0577|consen 235 YHIAQNE---------------------------------------------------------------------SPTL 245 (948)
T ss_pred HHHHhcC---------------------------------------------------------------------CCCC
Confidence 5554421 1223
Q ss_pred CCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCCCCC
Q psy3880 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFD 285 (408)
Q Consensus 241 ~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~~~~ 285 (408)
.+++| |+..+.|+..||++-|.+|||++++|.|+|......+
T Consensus 246 qs~eW---S~~F~~Fvd~CLqKipqeRptse~ll~H~fv~R~Rp~ 287 (948)
T KOG0577|consen 246 QSNEW---SDYFRNFVDSCLQKIPQERPTSEELLKHRFVLRERPP 287 (948)
T ss_pred CCchh---HHHHHHHHHHHHhhCcccCCcHHHHhhcchhccCCCc
Confidence 44555 7789999999999999999999999999999876443
No 112
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=1.4e-33 Score=271.43 Aligned_cols=198 Identities=31% Similarity=0.513 Sum_probs=151.6
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhh-------CCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCc
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDII-------NSNPALRYIMRQLFEALEHVHNHSVVHRDLKPEN 76 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~-------~~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~N 76 (408)
.+.|++++ .+.+ +.++..++||||+.||. |.+.+ .+++.+..++.|++.||+|||++||+||||||+|
T Consensus 56 ~l~h~~iv-~~~~~~~~~~~~~lv~e~~~~~~--L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~N 132 (285)
T cd05605 56 KVNSRFVV-SLAYAYETKDALCLVLTLMNGGD--LKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPEN 132 (285)
T ss_pred hcCCCCEe-eeeeeecCCCeEEEEEeccCCCc--HHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHH
Confidence 46788755 5543 45567899999999998 65544 2457889999999999999999999999999999
Q ss_pred EEEecCCCEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchh
Q psy3880 77 ILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQ 156 (408)
Q Consensus 77 ILl~~~~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~ 156 (408)
|++++++.++|+|||++..+.........+|++.|+|||++.. ..++.++|+||+||++|+|++|..||.+.+.
T Consensus 133 il~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~------~~~~~~~Diws~G~~l~el~~g~~pf~~~~~ 206 (285)
T cd05605 133 ILLDDYGHIRISDLGLAVEIPEGETIRGRVGTVGYMAPEVVKN------ERYTFSPDWWGLGCLIYEMIEGKSPFRQRKE 206 (285)
T ss_pred EEECCCCCEEEeeCCCceecCCCCccccccCCCCccCcHHhcC------CCCCccccchhHHHHHHHHHHCCCCCCCCch
Confidence 9999999999999999987654444445689999999999864 3466778888888888888888888854332
Q ss_pred HHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhc
Q psy3880 157 MVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEG 236 (408)
Q Consensus 157 ~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~ 236 (408)
..... .....+...
T Consensus 207 ~~~~~------------------------------------------------------------------~~~~~~~~~ 220 (285)
T cd05605 207 KVKRE------------------------------------------------------------------EVERRVKED 220 (285)
T ss_pred hhHHH------------------------------------------------------------------HHHHHhhhc
Confidence 11110 111122222
Q ss_pred CCCCCCCcCCCCCccHHHHHHHhcccCCCCCC-----CHHHHHcCCCCCCC
Q psy3880 237 KYSFSSPEWNDISEDPKDLIRKLLIVTPEDRY-----SVKEALNHSFFHPK 282 (408)
Q Consensus 237 ~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~-----ta~e~L~Hpwf~~~ 282 (408)
...+ ...+++.+++||.+||..||++|+ |++++++||||...
T Consensus 221 ~~~~----~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~ 267 (285)
T cd05605 221 QEEY----SEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFFRTA 267 (285)
T ss_pred cccc----CcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcCcCccCC
Confidence 2222 235789999999999999999999 99999999999764
No 113
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.2e-33 Score=282.77 Aligned_cols=222 Identities=22% Similarity=0.375 Sum_probs=153.1
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC-----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEE
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN-----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENIL 78 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~-----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NIL 78 (408)
.|.|+|+| .+.+ +.++..++|+|++. |+ |.+.+. +..+++.++.||+.||+|||++|||||||||+|||
T Consensus 139 ~l~HpnIv-~~~~~~~~~~~~~lv~e~~~-~~--L~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIl 214 (391)
T PHA03212 139 AINHPSII-QLKGTFTYNKFTCLILPRYK-TD--LYCYLAAKRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIF 214 (391)
T ss_pred hCCCCCCC-CEeEEEEECCeeEEEEecCC-CC--HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEE
Confidence 47899865 5544 44566789999986 44 555543 34788999999999999999999999999999999
Q ss_pred EecCCCEEEeccccchhcccC--cccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCch-
Q psy3880 79 LDDQMNVKLTDFGFARVLKKG--EKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRK- 155 (408)
Q Consensus 79 l~~~~~iKl~DFGla~~~~~~--~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~- 155 (408)
++.++.+||+|||+|...... ......+||+.|+|||++.. ..|+.++|+||+||++|+|++|..||....
T Consensus 215 l~~~~~vkL~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwSlGvil~elltg~~p~~~~~~ 288 (391)
T PHA03212 215 INHPGDVCLGDFGAACFPVDINANKYYGWAGTIATNAPELLAR------DPYGPAVDIWSAGIVLFEMATCHDSLFEKDG 288 (391)
T ss_pred EcCCCCEEEEeCCcccccccccccccccccCccCCCChhhhcC------CCCCcHHHHHHHHHHHHHHHHCCCCcCCccc
Confidence 999999999999999754321 22335689999999999864 357899999999999999999998886532
Q ss_pred ------hHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchh-HH
Q psy3880 156 ------QMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQ-MV 228 (408)
Q Consensus 156 ------~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~-~~ 228 (408)
....+..+......... ++ |+..... ..
T Consensus 289 ~~~~~~~~~~l~~i~~~~g~~p~-~~--------------------------------------------~~~~~~~~~~ 323 (391)
T PHA03212 289 LDGDCDSDRQIKLIIRRSGTHPN-EF--------------------------------------------PIDAQANLDE 323 (391)
T ss_pred ccccCchhHHHHHHHHHhcCChh-hc--------------------------------------------CcchhHHHHH
Confidence 12223333222111100 00 0000000 00
Q ss_pred HHHHHHhcCC--CCCCCcCC---CCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q psy3880 229 MLRNIMEGKY--SFSSPEWN---DISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPK 282 (408)
Q Consensus 229 ~~~~i~~~~~--~f~~~~~~---~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~ 282 (408)
.+........ ....+.|. .++.++++||.+||++||++||||+|+|+||||+..
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~~~ 382 (391)
T PHA03212 324 IYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQDI 382 (391)
T ss_pred HHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhccC
Confidence 0000000000 01112222 357789999999999999999999999999999764
No 114
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=2e-33 Score=289.28 Aligned_cols=220 Identities=23% Similarity=0.281 Sum_probs=147.1
Q ss_pred CCcHHHHHHHHHhhchhhHHhhhC-----CHHHHHHHHHHHHHHHHHHHH-CCCeeccCCCCcEEEecCC----------
Q psy3880 20 GDDLKHLAAQVVDKGEAAVQDIIN-----SNPALRYIMRQLFEALEHVHN-HSVVHRDLKPENILLDDQM---------- 83 (408)
Q Consensus 20 ~~~~~~lv~e~~~~g~~~l~~~~~-----~~~~~r~i~~qil~aL~~LH~-~~IvHRDLKp~NILl~~~~---------- 83 (408)
.....++|||++ ||. |.+.+. ...+++.++.||+.||+|||+ .|||||||||+|||++.++
T Consensus 203 ~~~~~~iv~~~~-g~~--l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~ 279 (467)
T PTZ00284 203 ETGHMCIVMPKY-GPC--LLDWIMKHGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRA 279 (467)
T ss_pred CCceEEEEEecc-CCC--HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccc
Confidence 344567899887 555 666553 457899999999999999998 5999999999999998665
Q ss_pred ------CEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhH
Q psy3880 84 ------NVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 157 (408)
Q Consensus 84 ------~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~ 157 (408)
.+||+|||++..... .....+||+.|+|||++.+ ..|+.++|||||||++|+|++|++||.+.+..
T Consensus 280 ~~~~~~~vkl~DfG~~~~~~~--~~~~~~gt~~Y~APE~~~~------~~~~~~~DiwSlGvil~elltG~~pf~~~~~~ 351 (467)
T PTZ00284 280 LPPDPCRVRICDLGGCCDERH--SRTAIVSTRHYRSPEVVLG------LGWMYSTDMWSMGCIIYELYTGKLLYDTHDNL 351 (467)
T ss_pred cCCCCceEEECCCCccccCcc--ccccccCCccccCcHHhhc------CCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH
Confidence 499999998764322 2345789999999999975 45789999999999999999999999988877
Q ss_pred HHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcC
Q psy3880 158 VMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 237 (408)
Q Consensus 158 ~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~ 237 (408)
+.+..+......+. ..|..... .+| ..++ +.......|... .. .+..+....
T Consensus 352 ~~~~~i~~~~g~~p-~~~~~~~~--~~~---------------~~~~-------~~~~~~~~~~~~--~~-~~~~~~~~~ 403 (467)
T PTZ00284 352 EHLHLMEKTLGRLP-SEWAGRCG--TEE---------------ARLL-------YNSAGQLRPCTD--PK-HLARIARAR 403 (467)
T ss_pred HHHHHHHHHcCCCC-HHHHhhcc--chh---------------HHHH-------hhhcccccccCC--HH-HHHhhhccc
Confidence 76666554322211 01100000 000 0000 000000011110 00 111111110
Q ss_pred CCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q psy3880 238 YSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPK 282 (408)
Q Consensus 238 ~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~ 282 (408)
. +.. ...++.+.|||++||++||++||||+|+|+||||...
T Consensus 404 ~-~~~---~~~~~~~~dli~~mL~~dP~~R~ta~e~L~Hp~~~~~ 444 (467)
T PTZ00284 404 P-VRE---VIRDDLLCDLIYGLLHYDRQKRLNARQMTTHPYVLKY 444 (467)
T ss_pred c-hhh---hhchHHHHHHHHHhCCcChhhCCCHHHHhcCcccccc
Confidence 0 000 0125678899999999999999999999999999864
No 115
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=6.3e-33 Score=272.83 Aligned_cols=241 Identities=22% Similarity=0.302 Sum_probs=161.7
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC-----CHHHHHHHHHHHHHHHHHHHHC-CCeeccCCCCcE
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN-----SNPALRYIMRQLFEALEHVHNH-SVVHRDLKPENI 77 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~-----~~~~~r~i~~qil~aL~~LH~~-~IvHRDLKp~NI 77 (408)
.+.|+|++ .+.+ ..++..++||||+.||. |.+.+. ++..+..++.|++.||.|||++ +|+||||||+||
T Consensus 59 ~l~h~~iv-~~~~~~~~~~~~~lv~e~~~~~~--L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Ni 135 (331)
T cd06649 59 ECNSPYIV-GFYGAFYSDGEISICMEHMDGGS--LDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNI 135 (331)
T ss_pred HCCCCCCC-eEEEEEEECCEEEEEeecCCCCc--HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhE
Confidence 46788855 5443 44566899999999998 877763 4578899999999999999986 699999999999
Q ss_pred EEecCCCEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhH
Q psy3880 78 LLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 157 (408)
Q Consensus 78 Ll~~~~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~ 157 (408)
|++.++.+||+|||++..+... ......||+.|+|||++.+ ..++.++|+||+||++|+|++|..||...+..
T Consensus 136 l~~~~~~~kl~Dfg~~~~~~~~-~~~~~~g~~~y~aPE~~~~------~~~~~~~DiwslG~il~el~tg~~p~~~~~~~ 208 (331)
T cd06649 136 LVNSRGEIKLCDFGVSGQLIDS-MANSFVGTRSYMSPERLQG------THYSVQSDIWSMGLSLVELAIGRYPIPPPDAK 208 (331)
T ss_pred EEcCCCcEEEccCccccccccc-ccccCCCCcCcCCHhHhcC------CCCCchHhHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 9999999999999998765432 2344679999999999864 35788999999999999999999999876654
Q ss_pred HHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcC
Q psy3880 158 VMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 237 (408)
Q Consensus 158 ~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~ 237 (408)
++...+...........+........ .++..... .+...............+....
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~ 264 (331)
T cd06649 209 ELEAIFGRPVVDGEEGEPHSISPRPR-------------PPGRPVSG-----------HGMDSRPAMAIFELLDYIVNEP 264 (331)
T ss_pred HHHHHhcccccccccCCccccCcccc-------------cccccccc-----------cccccccchhHHHHHHHHHhCC
Confidence 43322211000000000000000000 00000000 0000000111222333333322
Q ss_pred CCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q psy3880 238 YSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPK 282 (408)
Q Consensus 238 ~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~ 282 (408)
... .....+++++++||++||++||++|||++|+|+||||+..
T Consensus 265 ~~~--~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~~~ 307 (331)
T cd06649 265 PPK--LPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFIKRS 307 (331)
T ss_pred CcC--CCCccccHHHHHHHHHHccCCcccCCCHHHHhcChHHhhc
Confidence 211 1123578999999999999999999999999999999764
No 116
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=1.1e-33 Score=280.68 Aligned_cols=204 Identities=26% Similarity=0.451 Sum_probs=148.8
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhh-CCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEecC
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDII-NSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQ 82 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~-~~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl~~~ 82 (408)
.+.|+|+| .+.+ +.++..|+||||+.+|. |.+.. ..+..+..++.||+.||+|||++||+||||||+|||++.+
T Consensus 128 ~l~h~~iv-~~~~~~~~~~~~~lv~e~~~~~~--L~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~ 204 (353)
T PLN00034 128 DVNHPNVV-KCHDMFDHNGEIQVLLEFMDGGS--LEGTHIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSA 204 (353)
T ss_pred hCCCCCcc-eeeeEeccCCeEEEEEecCCCCc--ccccccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCC
Confidence 46798855 5443 44566789999999998 65543 4567788999999999999999999999999999999999
Q ss_pred CCEEEeccccchhcccCc-ccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHHHHH
Q psy3880 83 MNVKLTDFGFARVLKKGE-KLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLR 161 (408)
Q Consensus 83 ~~iKl~DFGla~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~~~~ 161 (408)
+.+||+|||++..+.... ......||+.|+|||++..... ....++.++|||||||++|+|++|+.||.....
T Consensus 205 ~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~----- 278 (353)
T PLN00034 205 KNVKIADFGVSRILAQTMDPCNSSVGTIAYMSPERINTDLN-HGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQ----- 278 (353)
T ss_pred CCEEEcccccceecccccccccccccCccccCccccccccc-cCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCC-----
Confidence 999999999998765332 2234679999999998753211 112234578888888888888888887742110
Q ss_pred HHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCCCCC
Q psy3880 162 NIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFS 241 (408)
Q Consensus 162 ~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~~f~ 241 (408)
.+ | ......+... ..
T Consensus 279 ----------------------------------------~~-~---------------------~~~~~~~~~~---~~ 293 (353)
T PLN00034 279 ----------------------------------------GD-W---------------------ASLMCAICMS---QP 293 (353)
T ss_pred ----------------------------------------cc-H---------------------HHHHHHHhcc---CC
Confidence 00 0 0111111111 11
Q ss_pred CCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCCC
Q psy3880 242 SPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKL 283 (408)
Q Consensus 242 ~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~~ 283 (408)
......++.++++||.+||..||++|||+.|+|+||||....
T Consensus 294 ~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp~~~~~~ 335 (353)
T PLN00034 294 PEAPATASREFRHFISCCLQREPAKRWSAMQLLQHPFILRAQ 335 (353)
T ss_pred CCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcCcccccCC
Confidence 122346789999999999999999999999999999998753
No 117
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=3.8e-33 Score=274.50 Aligned_cols=203 Identities=29% Similarity=0.545 Sum_probs=154.6
Q ss_pred cccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC------CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEE
Q psy3880 7 VAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN------SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENIL 78 (408)
Q Consensus 7 ~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~------~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NIL 78 (408)
+.|+++ +.+.+ +.++..|+||||+.||+ |.+++. ++..++.++.||+.||+|||++||+||||||+|||
T Consensus 58 ~~~~~i-~~~~~~~~~~~~~~lv~e~~~g~~--L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil 134 (331)
T cd05597 58 GDRRWI-TNLHYAFQDENNLYLVMDYYVGGD--LLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVL 134 (331)
T ss_pred CCCCCC-CceEEEEecCCeEEEEEecCCCCc--HHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEE
Confidence 457764 45543 45667899999999998 777663 34789999999999999999999999999999999
Q ss_pred EecCCCEEEeccccchhcccCccc--ccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchh
Q psy3880 79 LDDQMNVKLTDFGFARVLKKGEKL--MDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQ 156 (408)
Q Consensus 79 l~~~~~iKl~DFGla~~~~~~~~~--~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~ 156 (408)
++.++.+||+|||++..+...... ...+||+.|+|||++.... .....++.++|+||+||++|+|++|..||.+.+.
T Consensus 135 l~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~ 213 (331)
T cd05597 135 LDKNGHIRLADFGSCLRLLADGTVQSNVAVGTPDYISPEILQAME-DGKGRYGPECDWWSLGVCMYEMLYGETPFYAESL 213 (331)
T ss_pred ECCCCCEEEEECCceeecCCCCCccccceeccccccCHHHHhhcc-ccccCCCCcceeehhhhHHHHHhhCCCCCCCCCH
Confidence 999999999999998765443322 2257999999999986421 0123467899999999999999999999977665
Q ss_pred HHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhc
Q psy3880 157 MVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEG 236 (408)
Q Consensus 157 ~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~ 236 (408)
.+....+......
T Consensus 214 ~~~~~~i~~~~~~------------------------------------------------------------------- 226 (331)
T cd05597 214 VETYGKIMNHKEH------------------------------------------------------------------- 226 (331)
T ss_pred HHHHHHHHcCCCc-------------------------------------------------------------------
Confidence 5544444321100
Q ss_pred CCCCCCCcCCCCCccHHHHHHHhcccCCCC--CCCHHHHHcCCCCCCC
Q psy3880 237 KYSFSSPEWNDISEDPKDLIRKLLIVTPED--RYSVKEALNHSFFHPK 282 (408)
Q Consensus 237 ~~~f~~~~~~~iS~~~~dLI~klL~~dP~~--R~ta~e~L~Hpwf~~~ 282 (408)
+.++ +.+..+|+++++||++||..++++ |++++++|+||||...
T Consensus 227 -~~~~-~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~hp~~~~~ 272 (331)
T cd05597 227 -FQFP-PDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDHPFFEGI 272 (331)
T ss_pred -ccCC-CccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCCCCCCC
Confidence 0111 123357999999999999875554 7899999999999764
No 118
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=3e-33 Score=272.08 Aligned_cols=141 Identities=31% Similarity=0.520 Sum_probs=110.8
Q ss_pred ccccCCcEEEEec----cCCcHHHHHHHHHhhchhhHHhhh--------------CCHHHHHHHHHHHHHHHHHHHHCCC
Q psy3880 6 MVAHSRVVVRVKE----EGDDLKHLAAQVVDKGEAAVQDII--------------NSNPALRYIMRQLFEALEHVHNHSV 67 (408)
Q Consensus 6 ~~~~~~~i~~~~~----~~~~~~~lv~e~~~~g~~~l~~~~--------------~~~~~~r~i~~qil~aL~~LH~~~I 67 (408)
.+.|+|+| .+.. ..+...++|+||+.++ |.+.+ .++..++.++.||+.||+|||++||
T Consensus 54 ~l~h~niv-~~~~~~~~~~~~~~~lv~e~~~~~---l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i 129 (317)
T cd07867 54 ELKHPNVI-ALQKVFLSHSDRKVWLLFDYAEHD---LWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWV 129 (317)
T ss_pred hCCCCCee-eEEEEEeccCCCeEEEEEeeeCCc---HHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence 46799865 4433 3445678999998765 33332 2346788999999999999999999
Q ss_pred eeccCCCCcEEE----ecCCCEEEeccccchhcccCc----ccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhH
Q psy3880 68 VHRDLKPENILL----DDQMNVKLTDFGFARVLKKGE----KLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGV 139 (408)
Q Consensus 68 vHRDLKp~NILl----~~~~~iKl~DFGla~~~~~~~----~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGv 139 (408)
+||||||+|||+ +.++.+||+|||+|+...... ......||+.|+|||++.+. ..++.++|+||+||
T Consensus 130 vH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~-----~~~~~~~DiwSlG~ 204 (317)
T cd07867 130 LHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGA-----RHYTKAIDIWAIGC 204 (317)
T ss_pred EcCCCCHHHEEEccCCCCCCcEEEeeccceeccCCCcccccccCcceecccccCcHHhcCC-----CccCcHHHHHhHHH
Confidence 999999999999 456789999999998664322 12345789999999998642 34788999999999
Q ss_pred HHHHHHhCCCCCCCch
Q psy3880 140 IMYTLLVGCPPFWHRK 155 (408)
Q Consensus 140 il~~ll~G~~pf~~~~ 155 (408)
++|+|++|.+||....
T Consensus 205 il~el~tg~~~f~~~~ 220 (317)
T cd07867 205 IFAELLTSEPIFHCRQ 220 (317)
T ss_pred HHHHHHhCCCCccccc
Confidence 9999999999997543
No 119
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=5.8e-33 Score=265.60 Aligned_cols=220 Identities=27% Similarity=0.460 Sum_probs=155.3
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhh--------CCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCC
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDII--------NSNPALRYIMRQLFEALEHVHNHSVVHRDLKPE 75 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~--------~~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~ 75 (408)
.+.|+|++ ++.+ ..++..|+||||+.+ . |.+.+ .+...++.++.||+.||+|||++||+||||||+
T Consensus 55 ~l~h~~i~-~~~~~~~~~~~~~~v~e~~~~-~--l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~ 130 (285)
T cd07861 55 ELQHPNIV-CLQDVLMQESRLYLIFEFLSM-D--LKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQ 130 (285)
T ss_pred hcCCCCEe-eeEEEEeeCCeEEEEEecCCC-C--HHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHH
Confidence 46788855 5554 345677999999985 3 44433 245788999999999999999999999999999
Q ss_pred cEEEecCCCEEEeccccchhcccCcc-cccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCc
Q psy3880 76 NILLDDQMNVKLTDFGFARVLKKGEK-LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHR 154 (408)
Q Consensus 76 NILl~~~~~iKl~DFGla~~~~~~~~-~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~ 154 (408)
|||++.++.+||+|||++........ .....+++.|+|||++... ..++.++|+||+||++|+|++|.+||.+.
T Consensus 131 nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-----~~~~~~~Dv~slG~il~~l~tg~~~~~~~ 205 (285)
T cd07861 131 NLLIDNKGVIKLADFGLARAFGIPVRVYTHEVVTLWYRAPEVLLGS-----PRYSTPVDIWSIGTIFAEMATKKPLFHGD 205 (285)
T ss_pred HEEEcCCCcEEECcccceeecCCCcccccCCcccccccChHHhcCC-----CCcCcHHHHHHHHHHHHHHHHCCCCCCCC
Confidence 99999999999999999876543221 2234678899999988642 34678999999999999999999999887
Q ss_pred hhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHH
Q psy3880 155 KQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIM 234 (408)
Q Consensus 155 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~ 234 (408)
........+.+.........|...... . .|....+.|
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------~--------~~~~~~~~~----------------------------- 242 (285)
T cd07861 206 SEIDQLFRIFRILGTPTEDVWPGVTSL------P--------DYKNTFPKW----------------------------- 242 (285)
T ss_pred CHHHHHHHHHHHhCCCChhhhhcchhh------H--------HHHhhcccc-----------------------------
Confidence 766555444332222111111110000 0 000000000
Q ss_pred hcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q psy3880 235 EGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFF 279 (408)
Q Consensus 235 ~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf 279 (408)
........+..+|+++++||++||+.||++|||+.++++||||
T Consensus 243 --~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~~~~ 285 (285)
T cd07861 243 --KKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPYF 285 (285)
T ss_pred --CcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcCCCC
Confidence 0000111234589999999999999999999999999999998
No 120
>KOG4645|consensus
Probab=100.00 E-value=1.2e-33 Score=301.88 Aligned_cols=200 Identities=31% Similarity=0.547 Sum_probs=164.2
Q ss_pred cccccCCcEEEEe--ccCCcHHHHHHHHHhhchhhHHhhh-----CCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcE
Q psy3880 5 EMVAHSRVVVRVK--EEGDDLKHLAAQVVDKGEAAVQDII-----NSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENI 77 (408)
Q Consensus 5 ~~~~~~~~i~~~~--~~~~~~~~lv~e~~~~g~~~l~~~~-----~~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NI 77 (408)
+++.|+|+| +++ +-.++..||-||||+||. |.+.+ ..+--.+.|..|++.|+.|||++|||||||||+||
T Consensus 1289 E~lnHpNlV-~YyGVEvHRekv~IFMEyC~~Gs--La~ll~~gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI 1365 (1509)
T KOG4645|consen 1289 EGLNHPNLV-RYYGVEVHREKVYIFMEYCEGGS--LASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANI 1365 (1509)
T ss_pred HhccCcccc-ccCceeecHHHHHHHHHHhccCc--HHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccce
Confidence 578999855 655 456778899999999997 65543 23356789999999999999999999999999999
Q ss_pred EEecCCCEEEeccccchhcccCc-----ccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCC
Q psy3880 78 LLDDQMNVKLTDFGFARVLKKGE-----KLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFW 152 (408)
Q Consensus 78 Ll~~~~~iKl~DFGla~~~~~~~-----~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~ 152 (408)
+++.+|.+|++|||.|..+..+. .+....|||.|||||++.+.. ..+.+.+.||||+||++.||+||+.||.
T Consensus 1366 ~Ld~~g~iK~~DFGsa~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~---~kG~~~A~DiWslGCVVlEM~tGkrPW~ 1442 (1509)
T KOG4645|consen 1366 LLDFNGLIKYGDFGSAVKIKNNAQTMPGELQSMMGTPMYMAPEVITGTK---GKGHGGAADIWSLGCVVLEMATGKRPWA 1442 (1509)
T ss_pred eeecCCcEEeecccceeEecCchhcCCHHHHhhcCCchhcCchhhcccc---cCCCCcchhhhcccceEEEeecCCCchh
Confidence 99999999999999998776542 345689999999999998742 3567889999999999999999999994
Q ss_pred CchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHH
Q psy3880 153 HRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRN 232 (408)
Q Consensus 153 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~ 232 (408)
..+. =| -|||-.-.|..|-
T Consensus 1443 ~~dn-----------------------------------------------e~---aIMy~V~~gh~Pq----------- 1461 (1509)
T KOG4645|consen 1443 ELDN-----------------------------------------------EW---AIMYHVAAGHKPQ----------- 1461 (1509)
T ss_pred hccc-----------------------------------------------hh---HHHhHHhccCCCC-----------
Confidence 3221 12 2677777776662
Q ss_pred HHhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q psy3880 233 IMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPK 282 (408)
Q Consensus 233 i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~ 282 (408)
++ ..+|.+.+|||.+||+.||++|+||.|+|.|.|-+..
T Consensus 1462 -------~P----~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~f~~~~ 1500 (1509)
T KOG4645|consen 1462 -------IP----ERLSSEGRDFLEHCLEQDPKMRWTASQLLEHAFGKSC 1500 (1509)
T ss_pred -------Cc----hhhhHhHHHHHHHHHhcCchhhhHHHHHHHhhccccc
Confidence 21 2389999999999999999999999999999997654
No 121
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=4.9e-33 Score=273.74 Aligned_cols=202 Identities=26% Similarity=0.492 Sum_probs=147.7
Q ss_pred cccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC------CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEE
Q psy3880 7 VAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN------SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENIL 78 (408)
Q Consensus 7 ~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~------~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NIL 78 (408)
+.|++ |+.+.+ +.++..|+||||+.||+ |.+.+. ++..++.++.|++.||+|||++||+||||||+|||
T Consensus 58 ~~~~~-i~~l~~~~~~~~~~~lv~Ey~~gg~--L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nil 134 (331)
T cd05624 58 GDCQW-ITTLHYAFQDENYLYLVMDYYVGGD--LLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVL 134 (331)
T ss_pred CCCCC-EeeEEEEEEcCCEEEEEEeCCCCCc--HHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEE
Confidence 46776 545554 45677899999999998 877663 34788999999999999999999999999999999
Q ss_pred EecCCCEEEeccccchhcccCccc--ccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchh
Q psy3880 79 LDDQMNVKLTDFGFARVLKKGEKL--MDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQ 156 (408)
Q Consensus 79 l~~~~~iKl~DFGla~~~~~~~~~--~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~ 156 (408)
++.++.+||+|||++......... ...+||+.|+|||++..... ....+
T Consensus 135 l~~~~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~~---------------------------- 185 (331)
T cd05624 135 LDMNGHIRLADFGSCLKMNQDGTVQSSVAVGTPDYISPEILQAMED-GMGKY---------------------------- 185 (331)
T ss_pred EcCCCCEEEEeccceeeccCCCceeeccccCCcccCCHHHHhcccc-CCCCC----------------------------
Confidence 999999999999999766543322 23579999999998853110 00112
Q ss_pred HHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhc
Q psy3880 157 MVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEG 236 (408)
Q Consensus 157 ~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~ 236 (408)
+.++|+||+||++|+|++|.+||...+..+.+..+...
T Consensus 186 ------------------------------------------~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~ 223 (331)
T cd05624 186 ------------------------------------------GPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNH 223 (331)
T ss_pred ------------------------------------------CCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcC
Confidence 33556666666666666666666655555555555544
Q ss_pred CCCCCC-CcCCCCCccHHHHHHHhcccCCCC--CCCHHHHHcCCCCCCC
Q psy3880 237 KYSFSS-PEWNDISEDPKDLIRKLLIVTPED--RYSVKEALNHSFFHPK 282 (408)
Q Consensus 237 ~~~f~~-~~~~~iS~~~~dLI~klL~~dP~~--R~ta~e~L~Hpwf~~~ 282 (408)
...++. ..+..+|++++|||.+||..++++ |++++++++||||...
T Consensus 224 ~~~~~~p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h~~f~~~ 272 (331)
T cd05624 224 EERFQFPSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAFFEGI 272 (331)
T ss_pred CCcccCCCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcCCCcCCC
Confidence 332221 234568999999999999976655 5689999999999763
No 122
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=3.7e-33 Score=270.16 Aligned_cols=224 Identities=26% Similarity=0.435 Sum_probs=158.6
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC------CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcE
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN------SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENI 77 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~------~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NI 77 (408)
.+.|+|++ .+.+ +.++..++||||+.+ . |.+.+. +...++.++.||+.||+|||++||+||||||+||
T Consensus 60 ~l~h~nI~-~~~~~~~~~~~~~lv~e~~~~-~--l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Ni 135 (301)
T cd07873 60 DLKHANIV-TLHDIIHTEKSLTLVFEYLDK-D--LKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNL 135 (301)
T ss_pred hcCCCCcc-eEEEEEecCCeEEEEEecccc-C--HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHE
Confidence 46798855 5554 445667899999985 3 554442 3478899999999999999999999999999999
Q ss_pred EEecCCCEEEeccccchhcccCc-ccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchh
Q psy3880 78 LLDDQMNVKLTDFGFARVLKKGE-KLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQ 156 (408)
Q Consensus 78 Ll~~~~~iKl~DFGla~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~ 156 (408)
|++.++.+||+|||++....... ......+++.|+|||++... ..++.++|+||+||++|+|++|++||.+.+.
T Consensus 136 l~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~-----~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~ 210 (301)
T cd07873 136 LINERGELKLADFGLARAKSIPTKTYSNEVVTLWYRPPDILLGS-----TDYSTQIDMWGVGCIFYEMSTGRPLFPGSTV 210 (301)
T ss_pred EECCCCcEEECcCcchhccCCCCCcccccceeecccCcHHHhCC-----CCCccHHHHHHHHHHHHHHHhCCCCCCCCCH
Confidence 99999999999999987644322 22345678999999998642 3567899999999999999999999988877
Q ss_pred HHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhc
Q psy3880 157 MVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEG 236 (408)
Q Consensus 157 ~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~ 236 (408)
.+....+...........|... +....+. .-..|...
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~----------------------~~~~~~~~------------- 247 (301)
T cd07873 211 EEQLHFIFRILGTPTEETWPGI--------LSNEEFK----------------------SYNYPKYR------------- 247 (301)
T ss_pred HHHHHHHHHHcCCCChhhchhh--------hcccccc----------------------ccccCccc-------------
Confidence 6666555443222222212110 0000000 00000000
Q ss_pred CCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q psy3880 237 KYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPK 282 (408)
Q Consensus 237 ~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~ 282 (408)
..........++++++|||.+||+.||.+|||++|+|+||||...
T Consensus 248 -~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~~~ 292 (301)
T cd07873 248 -ADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHCL 292 (301)
T ss_pred -cccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccc
Confidence 000001124678999999999999999999999999999999753
No 123
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=3.2e-33 Score=269.03 Aligned_cols=199 Identities=29% Similarity=0.491 Sum_probs=150.7
Q ss_pred ccccCCcEEEEec-cCCcHHHHHHHHHhhchhhHHhhh-------CCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcE
Q psy3880 6 MVAHSRVVVRVKE-EGDDLKHLAAQVVDKGEAAVQDII-------NSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENI 77 (408)
Q Consensus 6 ~~~~~~~i~~~~~-~~~~~~~lv~e~~~~g~~~l~~~~-------~~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NI 77 (408)
.+.|++++..+.. ..++..++||||+.||. |.+.+ .++.++..++.|++.||.|||++||+||||||+||
T Consensus 56 ~l~~~~i~~~~~~~~~~~~~~lv~e~~~g~~--L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Ni 133 (285)
T cd05630 56 KVNSRFVVSLAYAYETKDALCLVLTLMNGGD--LKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENI 133 (285)
T ss_pred hCCCCCeeeeeEEEecCCEEEEEEEecCCCc--HHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHE
Confidence 4678875533332 45567899999999998 76655 24478899999999999999999999999999999
Q ss_pred EEecCCCEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhH
Q psy3880 78 LLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 157 (408)
Q Consensus 78 Ll~~~~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~ 157 (408)
+++.++.++|+|||++.............||+.|+|||++.. ..++.++|+||+||++|+|++|..||......
T Consensus 134 l~~~~~~~~l~Dfg~~~~~~~~~~~~~~~g~~~y~aPE~~~~------~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~ 207 (285)
T cd05630 134 LLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKN------ERYTFSPDWWALGCLLYEMIAGQSPFQQRKKK 207 (285)
T ss_pred EECCCCCEEEeeccceeecCCCccccCCCCCccccChHHHcC------CCCCCccccHHHHHHHHHHHhCCCCCCCCCcc
Confidence 999999999999999876654444445689999999999864 34678899999999999999999988543210
Q ss_pred HHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcC
Q psy3880 158 VMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 237 (408)
Q Consensus 158 ~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~ 237 (408)
... .....+....
T Consensus 208 ~~~-------------------------------------------------------------------~~~~~~~~~~ 220 (285)
T cd05630 208 IKR-------------------------------------------------------------------EEVERLVKEV 220 (285)
T ss_pred chH-------------------------------------------------------------------HHHHhhhhhh
Confidence 000 0000000000
Q ss_pred CCCCCCcCCCCCccHHHHHHHhcccCCCCCCC-----HHHHHcCCCCCCC
Q psy3880 238 YSFSSPEWNDISEDPKDLIRKLLIVTPEDRYS-----VKEALNHSFFHPK 282 (408)
Q Consensus 238 ~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~t-----a~e~L~Hpwf~~~ 282 (408)
.......+++++++||++||+.||++|+| ++|+++||||...
T Consensus 221 ---~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~~~~~ 267 (285)
T cd05630 221 ---QEEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPLFKQI 267 (285)
T ss_pred ---hhhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcChhhhcc
Confidence 00112457889999999999999999999 9999999999763
No 124
>KOG0201|consensus
Probab=99.98 E-value=1.5e-33 Score=273.55 Aligned_cols=193 Identities=29% Similarity=0.482 Sum_probs=153.1
Q ss_pred cccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC-----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEE
Q psy3880 7 VAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN-----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILL 79 (408)
Q Consensus 7 ~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~-----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl 79 (408)
+.++|+. +++. -.+...+++||||.||. +.+.+. .+.++..++++++.||.|||+++.+|||||+.|||+
T Consensus 68 ~~~~~it-~yygsyl~g~~LwiiMey~~gGs--v~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~ 144 (467)
T KOG0201|consen 68 CDSPNIT-EYYGSYLKGTKLWIIMEYCGGGS--VLDLLKSGNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILL 144 (467)
T ss_pred cCcchHH-hhhhheeecccHHHHHHHhcCcc--hhhhhccCCCCccceeeeehHHHHHHhhhhhhcceecccccccceeE
Confidence 3455433 4443 34567899999999998 766653 557889999999999999999999999999999999
Q ss_pred ecCCCEEEeccccchhcccCccc-ccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHH
Q psy3880 80 DDQMNVKLTDFGFARVLKKGEKL-MDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMV 158 (408)
Q Consensus 80 ~~~~~iKl~DFGla~~~~~~~~~-~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~ 158 (408)
..+|.+|++|||++..+...... .+++|||+|||||++.+ .+|+.++||||||++.+||++|.+|+.......
T Consensus 145 s~~g~vkl~DfgVa~ql~~~~~rr~tfvGTPfwMAPEVI~~------~~Y~~KADIWSLGITaiEla~GePP~s~~hPmr 218 (467)
T KOG0201|consen 145 SESGDVKLADFGVAGQLTNTVKRRKTFVGTPFWMAPEVIKQ------SGYDTKADIWSLGITAIELAKGEPPHSKLHPMR 218 (467)
T ss_pred eccCcEEEEecceeeeeechhhccccccccccccchhhhcc------ccccchhhhhhhhHHHHHHhcCCCCCcccCcce
Confidence 99999999999999887755433 67899999999999984 579999999999999999999999985543211
Q ss_pred HHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCC
Q psy3880 159 MLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKY 238 (408)
Q Consensus 159 ~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~ 238 (408)
. +|.+.-..||-
T Consensus 219 v---------------------------------------------------lflIpk~~PP~----------------- 230 (467)
T KOG0201|consen 219 V---------------------------------------------------LFLIPKSAPPR----------------- 230 (467)
T ss_pred E---------------------------------------------------EEeccCCCCCc-----------------
Confidence 1 01111112221
Q ss_pred CCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCC
Q psy3880 239 SFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHP 281 (408)
Q Consensus 239 ~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~ 281 (408)
.-...|+.+++||..||.+||+.||||.++|+|+|++.
T Consensus 231 -----L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh~FIk~ 268 (467)
T KOG0201|consen 231 -----LDGDFSPPFKEFVEACLDKNPEFRPSAKELLKHKFIKR 268 (467)
T ss_pred -----cccccCHHHHHHHHHHhhcCcccCcCHHHHhhhHHHHh
Confidence 11246889999999999999999999999999999976
No 125
>KOG0696|consensus
Probab=99.98 E-value=9.1e-34 Score=272.49 Aligned_cols=195 Identities=28% Similarity=0.545 Sum_probs=154.3
Q ss_pred ccCCcEEEEeccCC--cHHHHHHHHHhhchhhHHhhhC-----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEe
Q psy3880 8 AHSRVVVRVKEEGD--DLKHLAAQVVDKGEAAVQDIIN-----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLD 80 (408)
Q Consensus 8 ~~~~~i~~~~~~~~--~~~~lv~e~~~~g~~~l~~~~~-----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl~ 80 (408)
..+++++.+..-.+ |..|+||||++||+ |-..|+ .++.+.+|+.+|+-||-|||++|||+||||.+|+|++
T Consensus 407 ~kppFL~qlHScFQTmDRLyFVMEyvnGGD--LMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd 484 (683)
T KOG0696|consen 407 GKPPFLVQLHSCFQTMDRLYFVMEYVNGGD--LMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLD 484 (683)
T ss_pred CCCchHHHHHHHhhhhhheeeEEEEecCch--hhhHHHHhcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEec
Confidence 45666666666443 67899999999999 655554 4589999999999999999999999999999999999
Q ss_pred cCCCEEEeccccchhc-ccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHHH
Q psy3880 81 DQMNVKLTDFGFARVL-KKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVM 159 (408)
Q Consensus 81 ~~~~iKl~DFGla~~~-~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~~ 159 (408)
.+|++||+|||+++.- ..+....+.||||-|+|||++..+ +|+.
T Consensus 485 ~eGHiKi~DFGmcKEni~~~~TTkTFCGTPdYiAPEIi~Yq------PYgk----------------------------- 529 (683)
T KOG0696|consen 485 SEGHIKIADFGMCKENIFDGVTTKTFCGTPDYIAPEIIAYQ------PYGK----------------------------- 529 (683)
T ss_pred cCCceEeeecccccccccCCcceeeecCCCcccccceEEec------cccc-----------------------------
Confidence 9999999999999753 344455679999999999998753 3444
Q ss_pred HHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCCC
Q psy3880 160 LRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYS 239 (408)
Q Consensus 160 ~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~~ 239 (408)
++|+||.||++|+||.|.|||.+.+..++++.|++.+..
T Consensus 530 -----------------------------------------svDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehnvs 568 (683)
T KOG0696|consen 530 -----------------------------------------SVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHNVS 568 (683)
T ss_pred -----------------------------------------chhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHccCc
Confidence 455555555555555555555566666677777777777
Q ss_pred CCCCcCCCCCccHHHHHHHhcccCCCCCCCH-----HHHHcCCCCCCCCC
Q psy3880 240 FSSPEWNDISEDPKDLIRKLLIVTPEDRYSV-----KEALNHSFFHPKLF 284 (408)
Q Consensus 240 f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta-----~e~L~Hpwf~~~~~ 284 (408)
++. .+|.+|.++++.+|.+.|.+|+.+ .++-.||||....+
T Consensus 569 yPK----slSkEAv~ickg~ltK~P~kRLGcg~~ge~di~~H~FFR~iDW 614 (683)
T KOG0696|consen 569 YPK----SLSKEAVAICKGLLTKHPGKRLGCGPEGERDIREHPFFRRIDW 614 (683)
T ss_pred Ccc----cccHHHHHHHHHHhhcCCccccCCCCccccchhhCcchhhccH
Confidence 764 689999999999999999999863 58999999986543
No 126
>PHA03207 serine/threonine kinase US3; Provisional
Probab=99.98 E-value=1.2e-32 Score=277.29 Aligned_cols=224 Identities=23% Similarity=0.350 Sum_probs=154.1
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC-----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEE
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN-----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENIL 78 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~-----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NIL 78 (408)
.+.|+++| ++.+ ..+...++|||++.+ + |.+.+. +..++..++.||+.||+|||++|||||||||+|||
T Consensus 142 ~l~h~~iv-~~~~~~~~~~~~~lv~e~~~~-~--l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nil 217 (392)
T PHA03207 142 TISHRAII-NLIHAYRWKSTVCMVMPKYKC-D--LFTYVDRSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIF 217 (392)
T ss_pred hcCCCCcc-ceeeeEeeCCEEEEEehhcCC-C--HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEE
Confidence 46798855 5543 344567899999865 3 555542 44789999999999999999999999999999999
Q ss_pred EecCCCEEEeccccchhcccCcc---cccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCch
Q psy3880 79 LDDQMNVKLTDFGFARVLKKGEK---LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRK 155 (408)
Q Consensus 79 l~~~~~iKl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~ 155 (408)
++.++.+||+|||++..+..... .....||+.|+|||++.. ..|+.++|+||+||++|+|++|..||.+..
T Consensus 218 l~~~~~~~l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DvwslGvil~el~~g~~pf~~~~ 291 (392)
T PHA03207 218 LDEPENAVLGDFGAACKLDAHPDTPQCYGWSGTLETNSPELLAL------DPYCAKTDIWSAGLVLFEMSVKNVTLFGKQ 291 (392)
T ss_pred EcCCCCEEEccCccccccCcccccccccccccccCccCHhHhcC------CCCCchhhHHHHHHHHHHHHHCCCCCCCCC
Confidence 99999999999999976554321 224679999999999864 357889999999999999999999998754
Q ss_pred h---HHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHH-h-hcCCCCCCCchhHHHH
Q psy3880 156 Q---MVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYT-L-LVGCPPFWHRKQMVML 230 (408)
Q Consensus 156 ~---~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~-l-l~g~~Pf~~~~~~~~~ 230 (408)
. ...+..+....... ..++.. -..+... .-+. . ....+|+.
T Consensus 292 ~~~~~~~l~~i~~~~~~~-~~~~~~---~~~~~~~----------------------~~~~~~~~~~~~~~~-------- 337 (392)
T PHA03207 292 VKSSSSQLRSIIRCMQVH-PLEFPQ---NGSTNLC----------------------KHFKQYAIVLRPPYT-------- 337 (392)
T ss_pred CCCcHHHHHHHHHHhccC-ccccCC---ccchhHH----------------------HHHHhhcccccCCcc--------
Confidence 2 23333333321100 000000 0000000 0000 0 00111110
Q ss_pred HHHHhcCCCCCC-CcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q psy3880 231 RNIMEGKYSFSS-PEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPK 282 (408)
Q Consensus 231 ~~i~~~~~~f~~-~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~ 282 (408)
.+. ......+.++++||++||++||++|||+.|+|+||||...
T Consensus 338 ---------~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~~~ 381 (392)
T PHA03207 338 ---------IPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLFTKE 381 (392)
T ss_pred ---------ccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCchhhcc
Confidence 000 0012457789999999999999999999999999999764
No 127
>PHA03209 serine/threonine kinase US3; Provisional
Probab=99.98 E-value=5.7e-33 Score=276.23 Aligned_cols=136 Identities=26% Similarity=0.461 Sum_probs=109.8
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC------CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcE
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN------SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENI 77 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~------~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NI 77 (408)
.+.|+|+| ++.+ ...+..++|+|++.+. |.+.+. +..++..++.||+.||.|||++|||||||||+||
T Consensus 113 ~l~h~~iv-~~~~~~~~~~~~~lv~e~~~~~---l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Ni 188 (357)
T PHA03209 113 NVNHPSVI-RMKDTLVSGAITCMVLPHYSSD---LYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENI 188 (357)
T ss_pred hCCCCCCc-ChhheEEeCCeeEEEEEccCCc---HHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHE
Confidence 47898855 5554 3445678999998654 555542 3578899999999999999999999999999999
Q ss_pred EEecCCCEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCC
Q psy3880 78 LLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151 (408)
Q Consensus 78 Ll~~~~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf 151 (408)
|++.++.+||+|||+++............||+.|+|||++.. ..|+.++|+||+||++|+|+++..|+
T Consensus 189 ll~~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwSlGvvl~ell~~~~~~ 256 (357)
T PHA03209 189 FINDVDQVCIGDLGAAQFPVVAPAFLGLAGTVETNAPEVLAR------DKYNSKADIWSAGIVLFEMLAYPSTI 256 (357)
T ss_pred EECCCCCEEEecCccccccccCcccccccccccccCCeecCC------CCCCchhhHHHHHHHHHHHHHcCCcc
Confidence 999999999999999976443333445679999999999864 35788999999999999999865554
No 128
>PHA03211 serine/threonine kinase US3; Provisional
Probab=99.98 E-value=1.7e-32 Score=281.09 Aligned_cols=221 Identities=22% Similarity=0.394 Sum_probs=151.8
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhh------CCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcE
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDII------NSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENI 77 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~------~~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NI 77 (408)
.|.|+|+| ++.+ ...+..++|||++.+ + |.+.+ .+..++..++.||+.||+|||++|||||||||+||
T Consensus 216 ~L~HpnIv-~l~~~~~~~~~~~lv~e~~~~-~--L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NI 291 (461)
T PHA03211 216 RLSHPAVL-ALLDVRVVGGLTCLVLPKYRS-D--LYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENV 291 (461)
T ss_pred HCCCCCCC-cEEEEEEECCEEEEEEEccCC-C--HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHE
Confidence 46899865 5443 345567899999864 4 55544 24578899999999999999999999999999999
Q ss_pred EEecCCCEEEeccccchhcccCcc---cccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCc
Q psy3880 78 LLDDQMNVKLTDFGFARVLKKGEK---LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHR 154 (408)
Q Consensus 78 Ll~~~~~iKl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~ 154 (408)
|++.++.+||+|||+++.+..... ....+||+.|+|||++.+ ..++.++|||||||++|+|++|..|+...
T Consensus 292 Ll~~~~~vkL~DFGla~~~~~~~~~~~~~~~~GT~~Y~APE~~~~------~~~~~~sDvwSlGviL~El~~g~~~lf~~ 365 (461)
T PHA03211 292 LVNGPEDICLGDFGAACFARGSWSTPFHYGIAGTVDTNAPEVLAG------DPYTPSVDIWSAGLVIFEAAVHTASLFSA 365 (461)
T ss_pred EECCCCCEEEcccCCceecccccccccccccCCCcCCcCHHHHcC------CCCCchHHHHHHHHHHHHHHHcCCCcccC
Confidence 999999999999999976543221 124679999999999864 35788999999999999999988766442
Q ss_pred hh-------HHHHHHHH-hccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchh
Q psy3880 155 KQ-------MVMLRNIM-EGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQ 226 (408)
Q Consensus 155 ~~-------~~~~~~i~-~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~ 226 (408)
.. ...+.+++ ...... ++ .+++.....
T Consensus 366 ~~~~~~~~~~~~l~~~i~~~~~~~--~~-------------------------------------------~~~~~~~~l 400 (461)
T PHA03211 366 SRGDERRPYDAQILRIIRQAQVHV--DE-------------------------------------------FPQHAGSRL 400 (461)
T ss_pred CcccccCCcHHHHHHHHHhhcccc--cc-------------------------------------------CCCCcchHH
Confidence 21 12222222 111110 00 001100000
Q ss_pred HHHHHHHH--hcCCCCCCCcCC---CCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCC
Q psy3880 227 MVMLRNIM--EGKYSFSSPEWN---DISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHP 281 (408)
Q Consensus 227 ~~~~~~i~--~~~~~f~~~~~~---~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~ 281 (408)
...+.... .....+..+.|. .++.++++||.+||++||.+|||+.|+|+||||+.
T Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp~f~~ 460 (461)
T PHA03211 401 VSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRLPLFQS 460 (461)
T ss_pred HHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhCcccCC
Confidence 00000000 011112223343 57789999999999999999999999999999975
No 129
>KOG0579|consensus
Probab=99.98 E-value=4.3e-33 Score=278.93 Aligned_cols=202 Identities=24% Similarity=0.454 Sum_probs=159.5
Q ss_pred ccCCcEEEEec--cCCcHHHHHHHHHhhchhh--H--HhhhCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEec
Q psy3880 8 AHSRVVVRVKE--EGDDLKHLAAQVVDKGEAA--V--QDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDD 81 (408)
Q Consensus 8 ~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~--l--~~~~~~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl~~ 81 (408)
+||++| .+.. ..++...+..|||.||-.. . .++...+++++.+++|+|.||.|||+++|||||||+.|||++.
T Consensus 87 dHP~iv-kLl~ayy~enkLwiliEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~Tl 165 (1187)
T KOG0579|consen 87 DHPVIV-KLLSAYYFENKLWILIEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTL 165 (1187)
T ss_pred CChHHH-HHHHHHhccCceEEEEeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEe
Confidence 588644 5443 4566778899999999611 1 2234567999999999999999999999999999999999999
Q ss_pred CCCEEEeccccchhccc-CcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHHHH
Q psy3880 82 QMNVKLTDFGFARVLKK-GEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVML 160 (408)
Q Consensus 82 ~~~iKl~DFGla~~~~~-~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~~~ 160 (408)
+|.|+|+|||++..... -..-.++.|||+|||||++.|..+. ..+|+.++||||||+++.+|..+.+|-..-+....+
T Consensus 166 dGdirLADFGVSAKn~~t~qkRDsFIGTPYWMAPEVvmCET~K-D~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVl 244 (1187)
T KOG0579|consen 166 DGDIRLADFGVSAKNKSTRQKRDSFIGTPYWMAPEVVMCETFK-DQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVL 244 (1187)
T ss_pred cCcEeeecccccccchhHHhhhccccCCcccccchheeecccc-CCCchhhhhHHhhhhHHHHHhccCCCccccchHHHH
Confidence 99999999998765432 2233468999999999999987765 468999999999999999999999987766666666
Q ss_pred HHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCCCC
Q psy3880 161 RNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240 (408)
Q Consensus 161 ~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~~f 240 (408)
.+|.... ||-. .
T Consensus 245 lKiaKSe---------------------------------------------------PPTL-----------------l 256 (1187)
T KOG0579|consen 245 LKIAKSE---------------------------------------------------PPTL-----------------L 256 (1187)
T ss_pred HHHhhcC---------------------------------------------------CCcc-----------------c
Confidence 6554321 1100 0
Q ss_pred CCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q psy3880 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPK 282 (408)
Q Consensus 241 ~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~ 282 (408)
.. ...|...+||+.+||++||..||++.++|+||||+..
T Consensus 257 qP---S~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hpfv~~~ 295 (1187)
T KOG0579|consen 257 QP---SHWSRSFSDFLKRCLVKNPRNRPPAAQLLKHPFVQNA 295 (1187)
T ss_pred Cc---chhhhHHHHHHHHHHhcCCccCCCHHHHhhCcccccC
Confidence 11 1336789999999999999999999999999999854
No 130
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=99.97 E-value=2.1e-32 Score=283.53 Aligned_cols=177 Identities=30% Similarity=0.513 Sum_probs=145.3
Q ss_pred HHHHHHHHhhchhhHHhhhC---------CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEecCCCEEEeccccch
Q psy3880 24 KHLAAQVVDKGEAAVQDIIN---------SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFAR 94 (408)
Q Consensus 24 ~~lv~e~~~~g~~~l~~~~~---------~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl~~~~~iKl~DFGla~ 94 (408)
.++||||+.+|+ |.+.+. ++.++..++.|++.||+|||+++|+||||||+|||++.++.+||+|||+++
T Consensus 114 i~lV~Ey~~~gs--L~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~~~vkL~DFGls~ 191 (496)
T PTZ00283 114 IALVLDYANAGD--LRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGDFGFSK 191 (496)
T ss_pred EEEEEeCCCCCc--HHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCCCCEEEEecccCe
Confidence 579999999999 877663 346889999999999999999999999999999999999999999999997
Q ss_pred hcccC---cccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHHHHHHHHhccccCC
Q psy3880 95 VLKKG---EKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFS 171 (408)
Q Consensus 95 ~~~~~---~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~~~~~i~~~~~~~~ 171 (408)
.+... ......+||+.|+|||++.. ..|+.++||||+||++|+|++|..||.+.+....+.++..+.
T Consensus 192 ~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~------~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~~~~---- 261 (496)
T PTZ00283 192 MYAATVSDDVGRTFCGTPYYVAPEIWRR------KPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLAGR---- 261 (496)
T ss_pred eccccccccccccccCCcceeCHHHhCC------CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCC----
Confidence 65432 12235789999999999864 357899999999999999999999997765544444433221
Q ss_pred CCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCCCCCCCcCCCCCcc
Q psy3880 172 SPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISED 251 (408)
Q Consensus 172 ~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~~f~~~~~~~iS~~ 251 (408)
+. +....++++
T Consensus 262 ------------------------------------------------------------------~~---~~~~~~~~~ 272 (496)
T PTZ00283 262 ------------------------------------------------------------------YD---PLPPSISPE 272 (496)
T ss_pred ------------------------------------------------------------------CC---CCCCCCCHH
Confidence 11 011346889
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHcCCCCCC
Q psy3880 252 PKDLIRKLLIVTPEDRYSVKEALNHSFFHP 281 (408)
Q Consensus 252 ~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~ 281 (408)
+++||.+||..||.+|||+.++|+|||+..
T Consensus 273 l~~li~~~L~~dP~~RPs~~ell~~p~~~~ 302 (496)
T PTZ00283 273 MQEIVTALLSSDPKRRPSSSKLLNMPICKL 302 (496)
T ss_pred HHHHHHHHcccChhhCcCHHHHHhCHHHHH
Confidence 999999999999999999999999999864
No 131
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=99.97 E-value=1.4e-31 Score=251.91 Aligned_cols=192 Identities=29% Similarity=0.469 Sum_probs=150.4
Q ss_pred ccccCCcEEEEecc---CCcHHHHHHHHHhhchhhHHhhhC-------CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCC
Q psy3880 6 MVAHSRVVVRVKEE---GDDLKHLAAQVVDKGEAAVQDIIN-------SNPALRYIMRQLFEALEHVHNHSVVHRDLKPE 75 (408)
Q Consensus 6 ~~~~~~~i~~~~~~---~~~~~~lv~e~~~~g~~~l~~~~~-------~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~ 75 (408)
.+.|++++ .+.+. .+...|+++||+.+|. |.+.+. +.+++..++.|++.||++||++||+||||||+
T Consensus 55 ~l~~~~i~-~~~~~~~~~~~~~~lv~e~~~~~~--l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~ 131 (257)
T cd08223 55 QLKHPNIV-AYRESWEGEDGLLYIVMGFCEGGD--LYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQ 131 (257)
T ss_pred hCCCCCee-eeeeeecCCCCEEEEEecccCCCc--HHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCch
Confidence 46788855 44432 3345689999999998 776653 34788999999999999999999999999999
Q ss_pred cEEEecCCCEEEeccccchhcccCc-ccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCc
Q psy3880 76 NILLDDQMNVKLTDFGFARVLKKGE-KLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHR 154 (408)
Q Consensus 76 NILl~~~~~iKl~DFGla~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~ 154 (408)
||+++.++.++|+|||++..+.... ......+++.|+|||++.. ..++.++|+||+||+++++++|..||...
T Consensus 132 nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~slG~il~~l~~g~~~~~~~ 205 (257)
T cd08223 132 NVFLTRTNIIKVGDLGIARVLENQCDMASTLIGTPYYMSPELFSN------KPYNYKSDVWALGCCVYEMATLKHAFNAK 205 (257)
T ss_pred hEEEecCCcEEEecccceEEecccCCccccccCCcCccChhHhcC------CCCCchhhhHHHHHHHHHHHcCCCCCCCC
Confidence 9999999999999999987664322 2234678999999999864 34678999999999999999999998765
Q ss_pred hhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHH
Q psy3880 155 KQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIM 234 (408)
Q Consensus 155 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~ 234 (408)
+.......+..+
T Consensus 206 ~~~~~~~~~~~~-------------------------------------------------------------------- 217 (257)
T cd08223 206 DMNSLVYRIIEG-------------------------------------------------------------------- 217 (257)
T ss_pred CHHHHHHHHHhc--------------------------------------------------------------------
Confidence 433332222221
Q ss_pred hcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q psy3880 235 EGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFF 279 (408)
Q Consensus 235 ~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf 279 (408)
... +....+++++.+||.+||..||++|||+.++++||||
T Consensus 218 --~~~---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~ 257 (257)
T cd08223 218 --KLP---PMPKDYSPELGELIATMLSKRPEKRPSVKSILRQPYI 257 (257)
T ss_pred --CCC---CCccccCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 100 0112467889999999999999999999999999997
No 132
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=99.97 E-value=3.6e-32 Score=261.56 Aligned_cols=199 Identities=31% Similarity=0.498 Sum_probs=151.5
Q ss_pred ccccCCcEEEEe-ccCCcHHHHHHHHHhhchhhHHhhh-------CCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcE
Q psy3880 6 MVAHSRVVVRVK-EEGDDLKHLAAQVVDKGEAAVQDII-------NSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENI 77 (408)
Q Consensus 6 ~~~~~~~i~~~~-~~~~~~~~lv~e~~~~g~~~l~~~~-------~~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NI 77 (408)
++.|++++.... ...++..++||||+.+|. |.+.+ .+...+..++.|++.||.|||++||+||||||+||
T Consensus 56 ~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~--L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Ni 133 (285)
T cd05632 56 KVNSQFVVNLAYAYETKDALCLVLTIMNGGD--LKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENI 133 (285)
T ss_pred HcCCcCceeEEEEEecCCEEEEEEEeccCcc--HHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHE
Confidence 567887664332 245567899999999998 65544 23578899999999999999999999999999999
Q ss_pred EEecCCCEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhH
Q psy3880 78 LLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 157 (408)
Q Consensus 78 Ll~~~~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~ 157 (408)
++++++.+||+|||++.............|++.|+|||++.. ..++.++|+||+||++|+|++|..||.+.+..
T Consensus 134 li~~~~~~kl~Dfg~~~~~~~~~~~~~~~g~~~~~aPE~~~~------~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~ 207 (285)
T cd05632 134 LLDDYGHIRISDLGLAVKIPEGESIRGRVGTVGYMAPEVLNN------QRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEK 207 (285)
T ss_pred EECCCCCEEEecCCcceecCCCCcccCCCCCcCccChHHhcC------CCCCcccchHHHHHHHHHHHhCCCCCCCCCHH
Confidence 999999999999999876554443445689999999999864 34677888888888888888888888554322
Q ss_pred HHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcC
Q psy3880 158 VMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 237 (408)
Q Consensus 158 ~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~ 237 (408)
..... +...+....
T Consensus 208 ~~~~~------------------------------------------------------------------~~~~~~~~~ 221 (285)
T cd05632 208 VKREE------------------------------------------------------------------VDRRVLETE 221 (285)
T ss_pred HHHHH------------------------------------------------------------------HHHhhhccc
Confidence 11111 111122111
Q ss_pred CCCCCCcCCCCCccHHHHHHHhcccCCCCCCC-----HHHHHcCCCCCCC
Q psy3880 238 YSFSSPEWNDISEDPKDLIRKLLIVTPEDRYS-----VKEALNHSFFHPK 282 (408)
Q Consensus 238 ~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~t-----a~e~L~Hpwf~~~ 282 (408)
.. ....+++++.+||.+||+.||++||| +.++++||||...
T Consensus 222 ~~----~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~ 267 (285)
T cd05632 222 EV----YSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHPFFRNM 267 (285)
T ss_pred cc----cCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcChhhhcC
Confidence 11 22457889999999999999999999 8899999999765
No 133
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=99.97 E-value=5.4e-32 Score=265.47 Aligned_cols=241 Identities=24% Similarity=0.321 Sum_probs=157.7
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC-------CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCc
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN-------SNPALRYIMRQLFEALEHVHNHSVVHRDLKPEN 76 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~-------~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~N 76 (408)
.+.|+|+| ++.. ..++..++||||+.+|. |.+.+. +...++.++.|++.||+|||++||+||||||+|
T Consensus 55 ~l~hpniv-~~~~~~~~~~~~~lv~e~~~~~~--l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~N 131 (327)
T cd08227 55 LFNHPNIV-PYRATFIADNELWVVTSFMAYGS--AKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASH 131 (327)
T ss_pred hcCCCCee-eEEEEEEECCEEEEEEeccCCCc--HHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhh
Confidence 36898855 5543 45567899999999998 766652 457889999999999999999999999999999
Q ss_pred EEEecCCCEEEeccccchhcccC-cc-------cccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCC
Q psy3880 77 ILLDDQMNVKLTDFGFARVLKKG-EK-------LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGC 148 (408)
Q Consensus 77 ILl~~~~~iKl~DFGla~~~~~~-~~-------~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~ 148 (408)
||++.++.++++||+.+...... .. .....++..|+|||++... ...|+.++|+||+||++|+|++|.
T Consensus 132 il~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~----~~~~~~~~DiwslG~il~el~~g~ 207 (327)
T cd08227 132 ILISVDGKVYLSGLRSNLSMINHGQRLRVVHDFPKYSVKVLPWLSPEVLQQN----LQGYDAKSDIYSVGITACELANGH 207 (327)
T ss_pred EEEecCCcEEEcccchhhccccccccccccccccccccceecccChHHhhcc----cCCCCchhhHHHHHHHHHHHHHCC
Confidence 99999999999999865433211 10 1123567789999998642 235789999999999999999999
Q ss_pred CCCCCchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHH
Q psy3880 149 PPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMV 228 (408)
Q Consensus 149 ~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~ 228 (408)
.||..............+...... + .....+|.+...... .+ .|.+-+ .+........
T Consensus 208 ~pf~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~----~~--~~~~~~--------~~~~~~~~~~--- 265 (327)
T cd08227 208 VPFKDMPATQMLLEKLNGTVPCLL----D-TTTIPAEELTMKPSR----SG--ANSGLG--------ESTTVSTPRP--- 265 (327)
T ss_pred CCCCCcchhHHHHHHhcCCccccc----c-ccchhhhhcccCCcc----cC--CcCCCC--------cccccCCcCc---
Confidence 999876655544444433221100 0 001112211110000 00 000000 0000000000
Q ss_pred HHHHHHhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCC
Q psy3880 229 MLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHP 281 (408)
Q Consensus 229 ~~~~i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~ 281 (408)
........+....+++++++||++||+.||++|||++|+|+||||+.
T Consensus 266 ------~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~~ 312 (327)
T cd08227 266 ------SNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQ 312 (327)
T ss_pred ------cccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChhhhh
Confidence 00000111122456889999999999999999999999999999965
No 134
>KOG0192|consensus
Probab=99.97 E-value=7.7e-32 Score=266.65 Aligned_cols=145 Identities=26% Similarity=0.465 Sum_probs=121.8
Q ss_pred cccCCcEEEEecc-CC-c-HHHHHHHHHhhchhhHHhhhCC-------HHHHHHHHHHHHHHHHHHHHCC-CeeccCCCC
Q psy3880 7 VAHSRVVVRVKEE-GD-D-LKHLAAQVVDKGEAAVQDIINS-------NPALRYIMRQLFEALEHVHNHS-VVHRDLKPE 75 (408)
Q Consensus 7 ~~~~~~i~~~~~~-~~-~-~~~lv~e~~~~g~~~l~~~~~~-------~~~~r~i~~qil~aL~~LH~~~-IvHRDLKp~ 75 (408)
|.|+|+| .+... .+ . ...|||||+.+|. |.+++.. ...+..++.||+.|++|||+++ ||||||||+
T Consensus 96 l~HpNIV-~f~G~~~~~~~~~~iVtEy~~~Gs--L~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~ 172 (362)
T KOG0192|consen 96 LRHPNIV-QFYGACTSPPGSLCIVTEYMPGGS--LSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSD 172 (362)
T ss_pred CCCCCee-eEEEEEcCCCCceEEEEEeCCCCc--HHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChh
Confidence 8899855 66652 22 2 4789999999999 8888855 1677889999999999999999 999999999
Q ss_pred cEEEecCC-CEEEeccccchhcccC-cccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCC
Q psy3880 76 NILLDDQM-NVKLTDFGFARVLKKG-EKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH 153 (408)
Q Consensus 76 NILl~~~~-~iKl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~ 153 (408)
|||++.++ ++||+|||+++..... .......||+.|||||++... ...|+.++||||||+++|||+||..||.+
T Consensus 173 NiLv~~~~~~~KI~DFGlsr~~~~~~~~~~~~~GT~~wMAPEv~~~~----~~~~~~K~DvySFgIvlWEl~t~~~Pf~~ 248 (362)
T KOG0192|consen 173 NILVDLKGKTLKIADFGLSREKVISKTSMTSVAGTYRWMAPEVLRGE----KSPYTEKSDVYSFGIVLWELLTGEIPFED 248 (362)
T ss_pred hEEEcCCCCEEEECCCccceeeccccccccCCCCCccccChhhhcCC----CCcCCccchhhhHHHHHHHHHHCCCCCCC
Confidence 99999997 9999999999876654 334447899999999999743 35689999999999999999999999977
Q ss_pred chhHH
Q psy3880 154 RKQMV 158 (408)
Q Consensus 154 ~~~~~ 158 (408)
....+
T Consensus 249 ~~~~~ 253 (362)
T KOG0192|consen 249 LAPVQ 253 (362)
T ss_pred CCHHH
Confidence 65533
No 135
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=99.97 E-value=5.7e-32 Score=255.51 Aligned_cols=193 Identities=30% Similarity=0.505 Sum_probs=150.2
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC-----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEE
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN-----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENIL 78 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~-----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NIL 78 (408)
.+.|++++ .+.+ +.++..++|+|++.||. |.+.+. ++..++.++.|++.||.|||++||+||||||+||+
T Consensus 60 ~l~~~~i~-~~~~~~~~~~~~~~v~e~~~~~~--l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil 136 (263)
T cd06625 60 NLQHERIV-QYYGCLRDDETLSIFMEYMPGGS--VKDQLKAYGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANIL 136 (263)
T ss_pred hCCCCCee-eeEEEEccCCeEEEEEEECCCCc--HHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEE
Confidence 46798865 5443 45567899999999997 766553 45788999999999999999999999999999999
Q ss_pred EecCCCEEEeccccchhcccCcc----cccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCc
Q psy3880 79 LDDQMNVKLTDFGFARVLKKGEK----LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHR 154 (408)
Q Consensus 79 l~~~~~iKl~DFGla~~~~~~~~----~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~ 154 (408)
++.++.++|+|||++........ .....|++.|+|||.+.+ ..++.++|+||+||++|++++|+.||...
T Consensus 137 v~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~el~~g~~p~~~~ 210 (263)
T cd06625 137 RDSAGNVKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVISG------EGYGRKADVWSVGCTVVEMLTEKPPWAEF 210 (263)
T ss_pred EcCCCCEEEeecccceeccccccccccccCCCcCccccCcceecc------CCCCchhhhHHHHHHHHHHHhCCCCcccc
Confidence 99999999999999876543211 123568889999999865 23778999999999999999999999654
Q ss_pred hhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHH
Q psy3880 155 KQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIM 234 (408)
Q Consensus 155 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~ 234 (408)
+......++..
T Consensus 211 ~~~~~~~~~~~--------------------------------------------------------------------- 221 (263)
T cd06625 211 EAMAAIFKIAT--------------------------------------------------------------------- 221 (263)
T ss_pred chHHHHHHHhc---------------------------------------------------------------------
Confidence 33322222111
Q ss_pred hcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q psy3880 235 EGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFF 279 (408)
Q Consensus 235 ~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf 279 (408)
..... .....++.++.+||++||..||.+|||+.|+|+||||
T Consensus 222 -~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 263 (263)
T cd06625 222 -QPTNP--QLPSHVSPDARNFLRRTFVENAKKRPSAEELLRHFFV 263 (263)
T ss_pred -cCCCC--CCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhCCCC
Confidence 10000 0113468899999999999999999999999999998
No 136
>KOG0983|consensus
Probab=99.97 E-value=4.3e-31 Score=242.86 Aligned_cols=201 Identities=24% Similarity=0.407 Sum_probs=161.6
Q ss_pred cc-CCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC---CHHHHHHHHHHHHHHHHHHH-HCCCeeccCCCCcEEEe
Q psy3880 8 AH-SRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN---SNPALRYIMRQLFEALEHVH-NHSVVHRDLKPENILLD 80 (408)
Q Consensus 8 ~~-~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~---~~~~~r~i~~qil~aL~~LH-~~~IvHRDLKp~NILl~ 80 (408)
.| +++||+-.. ..+....+.||+|..+-+.|..++. .+.-+-.+...++.||.||- ++||||||+||+|||+|
T Consensus 147 s~dcpyIV~c~GyFi~n~dV~IcMelMs~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlD 226 (391)
T KOG0983|consen 147 SHDCPYIVQCFGYFITNTDVFICMELMSTCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLD 226 (391)
T ss_pred ccCCCeeeeeeeEEeeCchHHHHHHHHHHHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEc
Confidence 45 778888654 4566789999999998766776664 23556677788999999997 57999999999999999
Q ss_pred cCCCEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCch-hHHH
Q psy3880 81 DQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRK-QMVM 159 (408)
Q Consensus 81 ~~~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~-~~~~ 159 (408)
+.|++|+||||++..+.++.......|-+.|||||.+.-. +...|+.++||||||++++||.||+.||.+.+ +.++
T Consensus 227 e~GniKlCDFGIsGrlvdSkAhtrsAGC~~YMaPERidp~---~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ 303 (391)
T KOG0983|consen 227 ERGNIKLCDFGISGRLVDSKAHTRSAGCAAYMAPERIDPP---DKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEV 303 (391)
T ss_pred cCCCEEeecccccceeecccccccccCCccccCccccCCC---CCCccchhhhhhhhccchhhhhcccCCCCCCCccHHH
Confidence 9999999999999988887777778899999999988632 35679999999999999999999999997754 4555
Q ss_pred HHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCCC
Q psy3880 160 LRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYS 239 (408)
Q Consensus 160 ~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~~ 239 (408)
+.+|+... +.
T Consensus 304 ltkvln~e----------------------------------------------------------------------PP 313 (391)
T KOG0983|consen 304 LTKVLNEE----------------------------------------------------------------------PP 313 (391)
T ss_pred HHHHHhcC----------------------------------------------------------------------CC
Confidence 55554421 11
Q ss_pred CCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q psy3880 240 FSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPK 282 (408)
Q Consensus 240 f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~ 282 (408)
. -+.-...|++.++|+..||++|+.+||.-.++|+|||+...
T Consensus 314 ~-L~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h~Fi~~y 355 (391)
T KOG0983|consen 314 L-LPGHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEHPFIKRY 355 (391)
T ss_pred C-CCcccCcCHHHHHHHHHHhhcCcccCcchHHHhcCcceeec
Confidence 0 01112379999999999999999999999999999999764
No 137
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.97 E-value=1.6e-31 Score=263.29 Aligned_cols=237 Identities=20% Similarity=0.314 Sum_probs=158.9
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC-----CHHHHHHHHHHHHHHHHHHHHC-CCeeccCCCCcE
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN-----SNPALRYIMRQLFEALEHVHNH-SVVHRDLKPENI 77 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~-----~~~~~r~i~~qil~aL~~LH~~-~IvHRDLKp~NI 77 (408)
.+.|+|+| .+.+ +.++..++||||+.||. |.+++. ....+..++.|++.||.|||++ +|+||||||+||
T Consensus 59 ~l~h~~iv-~~~~~~~~~~~~~lv~e~~~~~~--L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Ni 135 (333)
T cd06650 59 ECNSPYIV-GFYGAFYSDGEISICMEHMDGGS--LDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNI 135 (333)
T ss_pred HCCCCccc-ceeEEEEECCEEEEEEecCCCCc--HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhE
Confidence 46788855 5443 45567899999999998 887763 3477889999999999999975 799999999999
Q ss_pred EEecCCCEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhH
Q psy3880 78 LLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 157 (408)
Q Consensus 78 Ll~~~~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~ 157 (408)
|++.++.+||+|||++..+... .....+||+.|+|||++.+ ..++.++|+||+||++|+|++|..||......
T Consensus 136 li~~~~~~kL~Dfg~~~~~~~~-~~~~~~~~~~y~aPE~~~~------~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~ 208 (333)
T cd06650 136 LVNSRGEIKLCDFGVSGQLIDS-MANSFVGTRSYMSPERLQG------THYSVQSDIWSMGLSLVEMAIGRYPIPPPDAK 208 (333)
T ss_pred EEcCCCCEEEeeCCcchhhhhh-ccccCCCCccccCHHHhcC------CCCCcHHHHHHHHHHHHHHHHCCCCCCCcchh
Confidence 9999999999999998765432 2234679999999999864 35778999999999999999999999876543
Q ss_pred HHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCC--chhHHHHHHHHh
Q psy3880 158 VMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH--RKQMVMLRNIME 235 (408)
Q Consensus 158 ~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~--~~~~~~~~~i~~ 235 (408)
.... +......-... .... .++ ....+.. +....|-.. .........+.+
T Consensus 209 ~~~~-~~~~~~~~~~~-~~~~----~~~---------------~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~ 260 (333)
T cd06650 209 ELEL-MFGCPVEGDPA-ESET----SPR---------------PRPPGRP-------LSSYGPDSRPPMAIFELLDYIVN 260 (333)
T ss_pred HHHH-HhcCcccCCcc-cccc----Ccc---------------cCCccch-------hhhhcccccccccHHHHHHHHhc
Confidence 3322 22111100000 0000 000 0000000 000011100 011112222322
Q ss_pred cCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q psy3880 236 GKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPK 282 (408)
Q Consensus 236 ~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~ 282 (408)
....... -...+.++++||.+||++||++|||++|+|+||||+..
T Consensus 261 ~~~~~~~--~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~~~~ 305 (333)
T cd06650 261 EPPPKLP--SGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAFIKRS 305 (333)
T ss_pred CCCccCC--CCCcCHHHHHHHHHhccCCcccCcCHHHHhhCHHHhcC
Confidence 2211111 12467899999999999999999999999999999764
No 138
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=99.97 E-value=6.9e-32 Score=258.26 Aligned_cols=220 Identities=26% Similarity=0.425 Sum_probs=151.7
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhh------CCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcE
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDII------NSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENI 77 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~------~~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NI 77 (408)
.+.|++++ .+.+ .+.+..++|+||+.++ |.+.+ .+.+.++.++.||+.||.|||++||+||||||+||
T Consensus 55 ~l~h~~i~-~~~~~~~~~~~~~lv~e~~~~~---l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~ni 130 (284)
T cd07839 55 ELKHKNIV-RLYDVLHSDKKLTLVFEYCDQD---LKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNL 130 (284)
T ss_pred hcCCCCee-eHHHHhccCCceEEEEecCCCC---HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHE
Confidence 36788744 5554 3456678999999864 44433 24578999999999999999999999999999999
Q ss_pred EEecCCCEEEeccccchhcccCc-ccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCC-Cch
Q psy3880 78 LLDDQMNVKLTDFGFARVLKKGE-KLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFW-HRK 155 (408)
Q Consensus 78 Ll~~~~~iKl~DFGla~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~-~~~ 155 (408)
+++.++.+||+|||++....... ......+++.|+|||.+.+. ..++.++|+||+||++|+|++|..||. +.+
T Consensus 131 l~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-----~~~~~~~DiwslG~il~~l~tg~~p~~~~~~ 205 (284)
T cd07839 131 LINKNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGA-----KLYSTSIDMWSAGCIFAELANAGRPLFPGND 205 (284)
T ss_pred EEcCCCcEEECccchhhccCCCCCCcCCCccccCCcChHHHhCC-----cccCcHHHHHHHHHHHHHHHhcCCCCcCCCC
Confidence 99999999999999998654332 22335678999999998642 346789999999999999999888864 444
Q ss_pred hHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHh
Q psy3880 156 QMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIME 235 (408)
Q Consensus 156 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~ 235 (408)
....+..+........ .+.|+... . +.....+.......
T Consensus 206 ~~~~~~~~~~~~~~~~------------------------------~~~~~~~~---~-~~~~~~~~~~~~~~------- 244 (284)
T cd07839 206 VDDQLKRIFRLLGTPT------------------------------EESWPGVS---K-LPDYKPYPMYPATT------- 244 (284)
T ss_pred HHHHHHHHHHHhCCCC------------------------------hHHhHHhh---h-cccccccCCCCCcc-------
Confidence 4444444433211110 01111000 0 00000000000000
Q ss_pred cCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q psy3880 236 GKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFF 279 (408)
Q Consensus 236 ~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf 279 (408)
.+ ......+|++++|||++||..||.+|||++|+|+||||
T Consensus 245 ---~~-~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h~~f 284 (284)
T cd07839 245 ---SL-VNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPYF 284 (284)
T ss_pred ---hh-hhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcCCCC
Confidence 00 01123578999999999999999999999999999998
No 139
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.97 E-value=5.4e-32 Score=259.67 Aligned_cols=195 Identities=29% Similarity=0.464 Sum_probs=147.6
Q ss_pred ccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC-----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEe
Q psy3880 8 AHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN-----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLD 80 (408)
Q Consensus 8 ~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~-----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl~ 80 (408)
.|++++ .+.+ ..++..++||||+.||. |.+.+. ++..+..++.|++.||+|||+++|+||||||+|||++
T Consensus 55 ~~~~i~-~~~~~~~~~~~~~lv~e~~~~~~--L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~ 131 (279)
T cd05633 55 DCPFIV-CMTYAFHTPDKLCFILDLMNGGD--LHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLD 131 (279)
T ss_pred CCCcEe-EEEEEEecCCeEEEEEecCCCCC--HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEEC
Confidence 566654 4443 34567899999999998 766653 4578999999999999999999999999999999999
Q ss_pred cCCCEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHHHH
Q psy3880 81 DQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVML 160 (408)
Q Consensus 81 ~~~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~~~ 160 (408)
.++.++|+|||++....... .....||+.|+|||.+.. ...++.++|+||+||++|+|++|..||........
T Consensus 132 ~~~~~~l~dfg~~~~~~~~~-~~~~~~~~~y~aPE~~~~-----~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~- 204 (279)
T cd05633 132 EHGHVRISDLGLACDFSKKK-PHASVGTHGYMAPEVLQK-----GTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK- 204 (279)
T ss_pred CCCCEEEccCCcceeccccC-ccCcCCCcCccCHHHhcC-----CCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCH-
Confidence 99999999999987554332 233578999999998753 23467889999999999999999999854321000
Q ss_pred HHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCCCC
Q psy3880 161 RNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240 (408)
Q Consensus 161 ~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~~f 240 (408)
+. ...... ..
T Consensus 205 ------------------------~~------------------------------------------~~~~~~----~~ 214 (279)
T cd05633 205 ------------------------HE------------------------------------------IDRMTL----TV 214 (279)
T ss_pred ------------------------HH------------------------------------------HHHHhh----cC
Confidence 00 000000 00
Q ss_pred CCCcCCCCCccHHHHHHHhcccCCCCCC-----CHHHHHcCCCCCCC
Q psy3880 241 SSPEWNDISEDPKDLIRKLLIVTPEDRY-----SVKEALNHSFFHPK 282 (408)
Q Consensus 241 ~~~~~~~iS~~~~dLI~klL~~dP~~R~-----ta~e~L~Hpwf~~~ 282 (408)
.......+++++++||++||..||++|+ |++|+++||||...
T Consensus 215 ~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~~~~~~ 261 (279)
T cd05633 215 NVELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFFKGI 261 (279)
T ss_pred CcCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCccccCC
Confidence 1111235788999999999999999999 69999999999874
No 140
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.97 E-value=8.4e-32 Score=261.58 Aligned_cols=228 Identities=29% Similarity=0.406 Sum_probs=159.8
Q ss_pred ccccCCcEEEEec----cCCcHHHHHHHHHhhchhhHHhhh---CCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEE
Q psy3880 6 MVAHSRVVVRVKE----EGDDLKHLAAQVVDKGEAAVQDII---NSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENIL 78 (408)
Q Consensus 6 ~~~~~~~i~~~~~----~~~~~~~lv~e~~~~g~~~l~~~~---~~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NIL 78 (408)
.+.|++++ .+.+ ...+..|+||||+.++...+.... .+..++..++.||+.||+|||++|++||||||+||+
T Consensus 62 ~l~h~~i~-~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil 140 (309)
T cd07845 62 NLRHPNIV-ELKEVVVGKHLDSIFLVMEYCEQDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLL 140 (309)
T ss_pred hCCCCCCc-ceEEEEecCCCCeEEEEEecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEE
Confidence 46788855 4443 222457899999986432233322 345788999999999999999999999999999999
Q ss_pred EecCCCEEEeccccchhcccCc-ccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhH
Q psy3880 79 LDDQMNVKLTDFGFARVLKKGE-KLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 157 (408)
Q Consensus 79 l~~~~~iKl~DFGla~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~ 157 (408)
++.++.+||+|||++....... ......+++.|+|||++.+. ..++.++|+||+||++|+|++|.+||.+.+..
T Consensus 141 ~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-----~~~~~~~DvwslG~il~el~~g~~~f~~~~~~ 215 (309)
T cd07845 141 LTDKGCLKIADFGLARTYGLPAKPMTPKVVTLWYRAPELLLGC-----TTYTTAIDMWAVGCILAELLAHKPLLPGKSEI 215 (309)
T ss_pred ECCCCCEEECccceeeecCCccCCCCcccccccccChhhhcCC-----CCcCchHHHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 9999999999999998765432 22234467889999998642 34678999999999999999999999998888
Q ss_pred HHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcC
Q psy3880 158 VMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 237 (408)
Q Consensus 158 ~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~ 237 (408)
..+..+...........|.... .+- ..+.... ....
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~------------------------------~~~--~~~~~~~------------~~~~ 251 (309)
T cd07845 216 EQLDLIIQLLGTPNESIWPGFS------------------------------DLP--LVGKFTL------------PKQP 251 (309)
T ss_pred HHHHHHHHhcCCCChhhchhhh------------------------------ccc--ccccccc------------cCCC
Confidence 8777776543322211111100 000 0000000 0000
Q ss_pred CCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCCC
Q psy3880 238 YSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKL 283 (408)
Q Consensus 238 ~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~~ 283 (408)
+......+...|++++|||++||+.||++|||++|+|+||||....
T Consensus 252 ~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f~~~~ 297 (309)
T cd07845 252 YNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFKEKP 297 (309)
T ss_pred CCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcChhhccCC
Confidence 0000111233688999999999999999999999999999998653
No 141
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.97 E-value=8.2e-32 Score=254.48 Aligned_cols=195 Identities=28% Similarity=0.514 Sum_probs=148.6
Q ss_pred cccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC-----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEE
Q psy3880 7 VAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN-----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILL 79 (408)
Q Consensus 7 ~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~-----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl 79 (408)
..|+|++ ++.+ +.++..|+|+||+.||. |.+.+. +...+..++.|++.||.|||+++++||||+|+||++
T Consensus 54 ~~~~~i~-~~~~~~~~~~~~~lv~e~~~~~~--L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~ 130 (260)
T cd05611 54 GESPYVA-KLYYSFQSKDYLYLVMEYLNGGD--CASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLI 130 (260)
T ss_pred CCCCCee-eeeeeEEcCCeEEEEEeccCCCC--HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE
Confidence 4677754 5554 45567899999999998 777663 447889999999999999999999999999999999
Q ss_pred ecCCCEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHHH
Q psy3880 80 DDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVM 159 (408)
Q Consensus 80 ~~~~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~~ 159 (408)
+.++.+||+|||++..... .....+++.|+|||.+.+. .++.++|+||+|+++|+|++|..||...+.
T Consensus 131 ~~~~~~~l~dfg~~~~~~~---~~~~~~~~~y~~pe~~~~~------~~~~~~Dv~slG~il~~l~~g~~p~~~~~~--- 198 (260)
T cd05611 131 DQTGHLKLTDFGLSRNGLE---NKKFVGTPDYLAPETILGV------GDDKMSDWWSLGCVIFEFLFGYPPFHAETP--- 198 (260)
T ss_pred CCCCcEEEeecccceeccc---cccCCCCcCccChhhhcCC------CCcchhhhHHHHHHHHHHHHCCCCCCCCCH---
Confidence 9999999999999875433 2235688899999988642 256777888888888887777777744322
Q ss_pred HHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCCC
Q psy3880 160 LRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYS 239 (408)
Q Consensus 160 ~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~~ 239 (408)
..+...+..+...
T Consensus 199 -------------------------------------------------------------------~~~~~~~~~~~~~ 211 (260)
T cd05611 199 -------------------------------------------------------------------DAVFDNILSRRIN 211 (260)
T ss_pred -------------------------------------------------------------------HHHHHHHHhcccC
Confidence 2222333333333
Q ss_pred CCCCcCCCCCccHHHHHHHhcccCCCCCCC---HHHHHcCCCCCCCC
Q psy3880 240 FSSPEWNDISEDPKDLIRKLLIVTPEDRYS---VKEALNHSFFHPKL 283 (408)
Q Consensus 240 f~~~~~~~iS~~~~dLI~klL~~dP~~R~t---a~e~L~Hpwf~~~~ 283 (408)
++......+++++.++|.+||+.||++||| ++|+|+||||....
T Consensus 212 ~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~~~~~~~~ 258 (260)
T cd05611 212 WPEEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKSHPFFKSIN 258 (260)
T ss_pred CCCcccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHcChHhhcCC
Confidence 333333467899999999999999999995 57999999997643
No 142
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=99.97 E-value=8.1e-32 Score=257.57 Aligned_cols=221 Identities=27% Similarity=0.468 Sum_probs=159.2
Q ss_pred cccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhh------CCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEE
Q psy3880 7 VAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDII------NSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENIL 78 (408)
Q Consensus 7 ~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~------~~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NIL 78 (408)
+.|++++ .+.+ ..++..|+|+||+ ++. |.+.+ .++.+++.++.||+.||+|||++||+|+||||+||+
T Consensus 56 ~~~~~i~-~~~~~~~~~~~~~~v~e~~-~~~--L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~ 131 (286)
T cd07832 56 CQHPYVV-KLLDVFPHGSGFVLVMEYM-PSD--LSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLL 131 (286)
T ss_pred CCCCCCc-ceeeEEecCCeeEEEeccc-CCC--HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEE
Confidence 4688755 4444 4556789999999 888 77665 245889999999999999999999999999999999
Q ss_pred EecCCCEEEeccccchhcccCc--ccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchh
Q psy3880 79 LDDQMNVKLTDFGFARVLKKGE--KLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQ 156 (408)
Q Consensus 79 l~~~~~iKl~DFGla~~~~~~~--~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~ 156 (408)
++.++.++|+|||++....... ......|+..|+|||.+... ..++.++|+||+||++|+|++|.+||.+.+.
T Consensus 132 ~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-----~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~ 206 (286)
T cd07832 132 ISADGVLKIADFGLARLFSEEEPRLYSHQVATRWYRAPELLYGA-----RKYDPGVDLWAVGCIFAELLNGSPLFPGEND 206 (286)
T ss_pred EcCCCcEEEeeeeecccccCCCCCccccccCcccccCceeeecc-----ccCCchhHHHHHHHHHHHHHcCCcCcCCCCH
Confidence 9999999999999988765432 23346789999999987532 3467899999999999999999999988877
Q ss_pred HHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhc
Q psy3880 157 MVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEG 236 (408)
Q Consensus 157 ~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~ 236 (408)
...+..+...........|..... ..-|+- ..|...... .+.
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~-----------~~~~~~~~~-~~~----- 248 (286)
T cd07832 207 IEQLAIVFRTLGTPNEETWPGLTS---------------------LPDYNK-----------ITFPESKPI-PLE----- 248 (286)
T ss_pred HHHHHHHHHHcCCCChHHHhhccC---------------------cchhhc-----------ccCCCCCcc-hHH-----
Confidence 766666654322211111111100 000000 000000000 000
Q ss_pred CCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCC
Q psy3880 237 KYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFH 280 (408)
Q Consensus 237 ~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~ 280 (408)
..+.+.+.++.+||.+||..||++|||++++|+||||.
T Consensus 249 ------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~~~~ 286 (286)
T cd07832 249 ------EIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPYFT 286 (286)
T ss_pred ------HhCCCccHHHHHHHHHHhccChhhCCCHHHHhhCcCcC
Confidence 11235678999999999999999999999999999994
No 143
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=99.97 E-value=1.6e-31 Score=265.08 Aligned_cols=235 Identities=24% Similarity=0.399 Sum_probs=158.8
Q ss_pred ccccCCcEEEEecc--------CCcHHHHHHHHHhhchhhHHhhh---CCHHHHHHHHHHHHHHHHHHHHCCCeeccCCC
Q psy3880 6 MVAHSRVVVRVKEE--------GDDLKHLAAQVVDKGEAAVQDII---NSNPALRYIMRQLFEALEHVHNHSVVHRDLKP 74 (408)
Q Consensus 6 ~~~~~~~i~~~~~~--------~~~~~~lv~e~~~~g~~~l~~~~---~~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp 74 (408)
.+.|++++ .+.+. +....|+||||+.+. |.+.+ .+.+++..++.|++.||+|||++||+||||||
T Consensus 71 ~l~h~~iv-~~~~~~~~~~~~~~~~~~~lv~e~~~~~---l~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp 146 (353)
T cd07850 71 LVNHKNII-GLLNVFTPQKSLEEFQDVYLVMELMDAN---LCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP 146 (353)
T ss_pred hcCCCCCc-ceeeeeccCCCccccCcEEEEEeccCCC---HHHHHhhcCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCH
Confidence 46788855 44331 112358999999764 44433 46688999999999999999999999999999
Q ss_pred CcEEEecCCCEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCc
Q psy3880 75 ENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHR 154 (408)
Q Consensus 75 ~NILl~~~~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~ 154 (408)
+||+++.++.+||+|||++.............+++.|+|||.+.+ ..++.++|+||+||++|+|++|..||...
T Consensus 147 ~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~------~~~~~~~DvwslG~~l~~l~~g~~pf~~~ 220 (353)
T cd07850 147 SNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG------MGYKENVDIWSVGCIMGEMIRGTVLFPGT 220 (353)
T ss_pred HHEEECCCCCEEEccCccceeCCCCCCCCCCcccccccCHHHHhC------CCCCCchhhHhHHHHHHHHHHCCCCCCCC
Confidence 999999999999999999987655443345678999999999864 45788999999999999999999999888
Q ss_pred hhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHH
Q psy3880 155 KQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIM 234 (408)
Q Consensus 155 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~ 234 (408)
+......++....... .++.... +...+.. .....+.+...........
T Consensus 221 ~~~~~~~~~~~~~~~~------------~~~~~~~---------------~~~~~~~--~~~~~~~~~~~~~~~~~~~-- 269 (353)
T cd07850 221 DHIDQWNKIIEQLGTP------------SDEFMSR---------------LQPTVRN--YVENRPKYAGYSFEELFPD-- 269 (353)
T ss_pred CHHHHHHHHHHhcCCC------------CHHHHHH---------------hhhhhhH--HhhcCCCCCCcchhhhCcc--
Confidence 7766666664421110 0010000 0000000 0011111111110011000
Q ss_pred hcCCCC-CCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q psy3880 235 EGKYSF-SSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPK 282 (408)
Q Consensus 235 ~~~~~f-~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~ 282 (408)
..+.. ....+...++++++||.+||+.||++|||+.|+|+||||...
T Consensus 270 -~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~~~~~ 317 (353)
T cd07850 270 -VLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHPYINVW 317 (353)
T ss_pred -cccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcChhHhhc
Confidence 00000 001123457789999999999999999999999999998743
No 144
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.97 E-value=6.3e-32 Score=257.56 Aligned_cols=191 Identities=26% Similarity=0.491 Sum_probs=147.1
Q ss_pred ccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC-----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEe
Q psy3880 8 AHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN-----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLD 80 (408)
Q Consensus 8 ~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~-----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl~ 80 (408)
.|++++ .+.+ ..++..|+||||+.+|. |.+.+. +++++..++.|++.||.|||++|++||||||+||+++
T Consensus 67 ~h~~iv-~~~~~~~~~~~~~iv~e~~~~~~--L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~ 143 (267)
T PHA03390 67 DNPNFI-KLYYSVTTLKGHVLIMDYIKDGD--LFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYD 143 (267)
T ss_pred cCCCEE-EEEEEEecCCeeEEEEEcCCCCc--HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEe
Confidence 677755 5554 45567899999999998 877653 4588999999999999999999999999999999999
Q ss_pred cCC-CEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHHH
Q psy3880 81 DQM-NVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVM 159 (408)
Q Consensus 81 ~~~-~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~~ 159 (408)
.++ .++|+|||++...... ....+++.|+|||++.. ..++.++|+||+||++|+|++|..||........
T Consensus 144 ~~~~~~~l~dfg~~~~~~~~---~~~~~~~~y~aPE~~~~------~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~ 214 (267)
T PHA03390 144 RAKDRIYLCDYGLCKIIGTP---SCYDGTLDYFSPEKIKG------HNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEEL 214 (267)
T ss_pred CCCCeEEEecCccceecCCC---ccCCCCCcccChhhhcC------CCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchh
Confidence 888 9999999998765432 23568899999999864 3467889999999999999999988853221100
Q ss_pred HHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCCC
Q psy3880 160 LRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYS 239 (408)
Q Consensus 160 ~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~~ 239 (408)
.+ .... ... .
T Consensus 215 -----------------------~~------------------------------------------~~~~-~~~----~ 224 (267)
T PHA03390 215 -----------------------DL------------------------------------------ESLL-KRQ----Q 224 (267)
T ss_pred -----------------------hH------------------------------------------HHHH-Hhh----c
Confidence 00 0000 111 1
Q ss_pred CCCCcCCCCCccHHHHHHHhcccCCCCCCC-HHHHHcCCCCC
Q psy3880 240 FSSPEWNDISEDPKDLIRKLLIVTPEDRYS-VKEALNHSFFH 280 (408)
Q Consensus 240 f~~~~~~~iS~~~~dLI~klL~~dP~~R~t-a~e~L~Hpwf~ 280 (408)
...+.++.+|+.+++||.+||+.||.+|++ ++|+|+||||.
T Consensus 225 ~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h~~~~ 266 (267)
T PHA03390 225 KKLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKHPFLK 266 (267)
T ss_pred ccCCcccccCHHHHHHHHHHhccChhhCCchHHHHhcCCccc
Confidence 111223468999999999999999999996 59999999995
No 145
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=99.97 E-value=2.4e-31 Score=254.26 Aligned_cols=223 Identities=29% Similarity=0.476 Sum_probs=156.8
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhh-----CCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEE
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDII-----NSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENIL 78 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~-----~~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NIL 78 (408)
.+.|+|++ .+.+ +.++..++||||+.++. |...+ .++..++.++.||+.||+|||++||+||||||+||+
T Consensus 56 ~~~h~~i~-~~~~~~~~~~~~~~v~e~~~~~~--l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil 132 (286)
T cd07847 56 QLKHPNLV-NLIEVFRRKRKLHLVFEYCDHTV--LNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENIL 132 (286)
T ss_pred hCCCCCEe-eeeeEEeeCCEEEEEEeccCccH--HHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEE
Confidence 46788755 5444 44556789999999986 55443 245789999999999999999999999999999999
Q ss_pred EecCCCEEEeccccchhcccCc-ccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhH
Q psy3880 79 LDDQMNVKLTDFGFARVLKKGE-KLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 157 (408)
Q Consensus 79 l~~~~~iKl~DFGla~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~ 157 (408)
++.++.+||+|||++....... ......++..|+|||++.+. ..++.++|+||+||++|+|++|.+||.+.+..
T Consensus 133 ~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-----~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~ 207 (286)
T cd07847 133 ITKQGQIKLCDFGFARILTGPGDDYTDYVATRWYRAPELLVGD-----TQYGPPVDVWAIGCVFAELLTGQPLWPGKSDV 207 (286)
T ss_pred EcCCCcEEECccccceecCCCcccccCcccccccCCHHHHhCC-----CCcCchhhhHHHHHHHHHHHhCCCCCCCCChH
Confidence 9999999999999998765433 22345678899999998642 34678999999999999999999999887765
Q ss_pred HHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcC
Q psy3880 158 VMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 237 (408)
Q Consensus 158 ~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~ 237 (408)
+.+..+.........+ ...+|+.....-.+ ..++-.....
T Consensus 208 ~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~--~~~~~~~~~~----------- 247 (286)
T cd07847 208 DQLYLIRKTLGDLIPR---------------------------HQQIFSTNQFFKGL--SIPEPETREP----------- 247 (286)
T ss_pred HHHHHHHHHhCCCChH---------------------------Hhhhcccccccccc--cCCCcccccC-----------
Confidence 5554443321111000 00000000000000 0000000000
Q ss_pred CCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q psy3880 238 YSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFF 279 (408)
Q Consensus 238 ~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf 279 (408)
....+..++.++.+||.+||..||++|||+.|+|.||||
T Consensus 248 ---~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~~~f 286 (286)
T cd07847 248 ---LESKFPNISSPALSFLKGCLQMDPTERLSCEELLEHPYF 286 (286)
T ss_pred ---HHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcCCCC
Confidence 001134578999999999999999999999999999998
No 146
>PHA02988 hypothetical protein; Provisional
Probab=99.97 E-value=2.2e-31 Score=256.32 Aligned_cols=189 Identities=14% Similarity=0.211 Sum_probs=148.0
Q ss_pred ccccCCcEEEEecc------CCcHHHHHHHHHhhchhhHHhhhCC-----HHHHHHHHHHHHHHHHHHHH-CCCeeccCC
Q psy3880 6 MVAHSRVVVRVKEE------GDDLKHLAAQVVDKGEAAVQDIINS-----NPALRYIMRQLFEALEHVHN-HSVVHRDLK 73 (408)
Q Consensus 6 ~~~~~~~i~~~~~~------~~~~~~lv~e~~~~g~~~l~~~~~~-----~~~~r~i~~qil~aL~~LH~-~~IvHRDLK 73 (408)
.+.|+| |+++... .....++||||+.||. |.+.+.+ ......++.|++.||.|||+ .+++|||||
T Consensus 74 ~l~h~n-Iv~~~g~~~~~~~~~~~~~lv~Ey~~~g~--L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlk 150 (283)
T PHA02988 74 RIDSNN-ILKIYGFIIDIVDDLPRLSLILEYCTRGY--LREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLT 150 (283)
T ss_pred hcCCCC-EEEEeeeEEecccCCCceEEEEEeCCCCc--HHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCC
Confidence 467986 5566642 2245689999999998 8888753 36778899999999999998 499999999
Q ss_pred CCcEEEecCCCEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCC
Q psy3880 74 PENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH 153 (408)
Q Consensus 74 p~NILl~~~~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~ 153 (408)
|+|||+++++.+||+|||+++.+.... ....||+.|+|||++... ...|+.++|||||||++|+|++|..||.+
T Consensus 151 p~nill~~~~~~kl~dfg~~~~~~~~~--~~~~~~~~y~aPE~~~~~----~~~~~~k~Di~SlGvil~el~~g~~Pf~~ 224 (283)
T PHA02988 151 SVSFLVTENYKLKIICHGLEKILSSPP--FKNVNFMVYFSYKMLNDI----FSEYTIKDDIYSLGVVLWEIFTGKIPFEN 224 (283)
T ss_pred hhhEEECCCCcEEEcccchHhhhcccc--ccccCcccccCHHHhhhc----cccccchhhhhHHHHHHHHHHHCCCCCCC
Confidence 999999999999999999998764322 345788999999998641 14578999999999999999999999977
Q ss_pred chhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHH
Q psy3880 154 RKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI 233 (408)
Q Consensus 154 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i 233 (408)
.+..+....+..+.
T Consensus 225 ~~~~~~~~~i~~~~------------------------------------------------------------------ 238 (283)
T PHA02988 225 LTTKEIYDLIINKN------------------------------------------------------------------ 238 (283)
T ss_pred CCHHHHHHHHHhcC------------------------------------------------------------------
Confidence 65544444433221
Q ss_pred HhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHc
Q psy3880 234 MEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALN 275 (408)
Q Consensus 234 ~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~ 275 (408)
..+..+ ...++++++||.+||+.||++|||+.|+++
T Consensus 239 ----~~~~~~--~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 274 (283)
T PHA02988 239 ----NSLKLP--LDCPLEIKCIVEACTSHDSIKRPNIKEILY 274 (283)
T ss_pred ----CCCCCC--CcCcHHHHHHHHHHhcCCcccCcCHHHHHH
Confidence 111111 145788999999999999999999999985
No 147
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.97 E-value=2.8e-31 Score=251.09 Aligned_cols=198 Identities=36% Similarity=0.656 Sum_probs=151.4
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC-----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEE
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN-----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENIL 78 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~-----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NIL 78 (408)
.+.|+|++ .+.+ ++++..|+|+||+.+|. |.+.+. +...+..++.||+.||+|||+++++|+||||+||+
T Consensus 49 ~l~h~~i~-~~~~~~~~~~~~~lv~e~~~~~~--L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nil 125 (262)
T cd05572 49 ECNHPFIV-KLYRTFKDKKYIYMLMEYCLGGE--LWTILRDRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLL 125 (262)
T ss_pred hCCCCCEe-eeeeeEEcCCccEEEEecCCCCc--HHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEE
Confidence 46788855 4443 45567899999999998 877764 44788899999999999999999999999999999
Q ss_pred EecCCCEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHH
Q psy3880 79 LDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMV 158 (408)
Q Consensus 79 l~~~~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~ 158 (408)
++.++.++|+|||++.............+++.|+|||.+.. ..++.++|+||+||++|++++|..||.....
T Consensus 126 v~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~PE~~~~------~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-- 197 (262)
T cd05572 126 LDSNGYVKLVDFGFAKKLKSGQKTWTFCGTPEYVAPEIILN------KGYDFSVDYWSLGILLYELLTGRPPFGEDDE-- 197 (262)
T ss_pred EcCCCCEEEeeCCcccccCcccccccccCCcCccChhHhcC------CCCCChhhhhhhHHHHHHHHhCCCCcCCCCC--
Confidence 99999999999999987765433344678999999998753 3456778888888888888888877744321
Q ss_pred HHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCC
Q psy3880 159 MLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKY 238 (408)
Q Consensus 159 ~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~ 238 (408)
+.......+..+..
T Consensus 198 ------------------------------------------------------------------~~~~~~~~~~~~~~ 211 (262)
T cd05572 198 ------------------------------------------------------------------DPMEIYNDILKGNG 211 (262)
T ss_pred ------------------------------------------------------------------CHHHHHHHHhccCC
Confidence 02223333432222
Q ss_pred CCCCCcCCCCCccHHHHHHHhcccCCCCCCC-----HHHHHcCCCCCCC
Q psy3880 239 SFSSPEWNDISEDPKDLIRKLLIVTPEDRYS-----VKEALNHSFFHPK 282 (408)
Q Consensus 239 ~f~~~~~~~iS~~~~dLI~klL~~dP~~R~t-----a~e~L~Hpwf~~~ 282 (408)
....+ ...+++++++|.+||..||++|+| ++|+++||||+..
T Consensus 212 ~~~~~--~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~ 258 (262)
T cd05572 212 KLEFP--NYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKHKWFNGF 258 (262)
T ss_pred CCCCC--cccCHHHHHHHHHHccCChhhCcCCcccCHHHHhcChhhhCC
Confidence 22112 234889999999999999999999 9999999999864
No 148
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=99.97 E-value=3e-31 Score=254.00 Aligned_cols=202 Identities=25% Similarity=0.432 Sum_probs=151.6
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhh------CCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcE
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDII------NSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENI 77 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~------~~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NI 77 (408)
.+.|+|++ .+.+ ..++..|+|+||+.+|. |.+.+ .+++.+..++.|++.||.|||+.||+||||||+||
T Consensus 58 ~l~h~~ii-~~~~~~~~~~~~~~v~e~~~~~~--l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~ni 134 (282)
T cd06643 58 SCDHPNIV-KLLDAFYYENNLWILIEFCAGGA--VDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNI 134 (282)
T ss_pred HCCCCCee-eEEEEEeeCCEEEEEEEecCCCc--HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccE
Confidence 46899865 4443 44566789999999998 65544 24578899999999999999999999999999999
Q ss_pred EEecCCCEEEeccccchhcccC-cccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchh
Q psy3880 78 LLDDQMNVKLTDFGFARVLKKG-EKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQ 156 (408)
Q Consensus 78 Ll~~~~~iKl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~ 156 (408)
|++.++.+||+|||++...... .......+++.|+|||++..... ....++.++|+||+||++|+|++|.+||...+.
T Consensus 135 li~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~ 213 (282)
T cd06643 135 LFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETS-KDRPYDYKADVWSLGITLIEMAQIEPPHHELNP 213 (282)
T ss_pred EEccCCCEEEccccccccccccccccccccccccccCHhhccccCC-CCCCCCccchhhhHHHHHHHHccCCCCccccCH
Confidence 9999999999999998765332 12234678999999999853321 123466788888888888888888888865544
Q ss_pred HHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhc
Q psy3880 157 MVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEG 236 (408)
Q Consensus 157 ~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~ 236 (408)
.....++..+
T Consensus 214 ~~~~~~~~~~---------------------------------------------------------------------- 223 (282)
T cd06643 214 MRVLLKIAKS---------------------------------------------------------------------- 223 (282)
T ss_pred HHHHHHHhhc----------------------------------------------------------------------
Confidence 3333322211
Q ss_pred CCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q psy3880 237 KYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPK 282 (408)
Q Consensus 237 ~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~ 282 (408)
... .......++.++++||.+||..||.+|||++++++||||...
T Consensus 224 ~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 268 (282)
T cd06643 224 EPP-TLAQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHPFVTVN 268 (282)
T ss_pred CCC-CCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCCCEecc
Confidence 100 001113467899999999999999999999999999999764
No 149
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=99.97 E-value=2.3e-31 Score=252.84 Aligned_cols=196 Identities=27% Similarity=0.470 Sum_probs=146.6
Q ss_pred ccCCcEEEEeccC--------CcHHHHHHHHHhhchhhHHhhhC-------CHHHHHHHHHHHHHHHHHHHHCCCeeccC
Q psy3880 8 AHSRVVVRVKEEG--------DDLKHLAAQVVDKGEAAVQDIIN-------SNPALRYIMRQLFEALEHVHNHSVVHRDL 72 (408)
Q Consensus 8 ~~~~~i~~~~~~~--------~~~~~lv~e~~~~g~~~l~~~~~-------~~~~~r~i~~qil~aL~~LH~~~IvHRDL 72 (408)
.|+|++ .+.... ++..|+||||+.+|. |.+.+. ++..+..++.|++.||+|||+++|+||||
T Consensus 61 ~h~~i~-~~~~~~~~~~~~~~~~~~~iv~e~~~~~~--L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl 137 (272)
T cd06637 61 HHRNIA-TYYGAFIKKNPPGMDDQLWLVMEFCGAGS--VTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDI 137 (272)
T ss_pred CCCCee-eEeeEEeecCCCCCCcEEEEEEEcCCCCc--HHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCC
Confidence 577755 544321 245689999999998 766543 34778889999999999999999999999
Q ss_pred CCCcEEEecCCCEEEeccccchhcccCc-ccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCC
Q psy3880 73 KPENILLDDQMNVKLTDFGFARVLKKGE-KLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151 (408)
Q Consensus 73 Kp~NILl~~~~~iKl~DFGla~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf 151 (408)
||+||+++.++.+||+|||++....... ......|++.|+|||++..... ....|+.++|+||+||++|+|++|..||
T Consensus 138 ~~~nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~~~~~~Dv~slGv~l~el~~g~~p~ 216 (272)
T cd06637 138 KGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDEN-PDATYDFKSDLWSLGITAIEMAEGAPPL 216 (272)
T ss_pred CHHHEEECCCCCEEEccCCCceecccccccCCcccccccccCHhHhccccC-cCCCCCchhhHHHHHHHHHHHHhCCCCc
Confidence 9999999999999999999987654322 2234678999999999864321 1235778899999999999999999998
Q ss_pred CCchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHH
Q psy3880 152 WHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLR 231 (408)
Q Consensus 152 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~ 231 (408)
...........+
T Consensus 217 ~~~~~~~~~~~~-------------------------------------------------------------------- 228 (272)
T cd06637 217 CDMHPMRALFLI-------------------------------------------------------------------- 228 (272)
T ss_pred cccCHHHHHHHH--------------------------------------------------------------------
Confidence 543322111110
Q ss_pred HHHhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q psy3880 232 NIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFF 279 (408)
Q Consensus 232 ~i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf 279 (408)
... .........++.++++||.+||..||.+|||+.|++.||||
T Consensus 229 --~~~--~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~~ 272 (272)
T cd06637 229 --PRN--PAPRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKHPFI 272 (272)
T ss_pred --hcC--CCCCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhCCCC
Confidence 000 00111123467889999999999999999999999999998
No 150
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=99.97 E-value=2.7e-31 Score=254.14 Aligned_cols=196 Identities=28% Similarity=0.467 Sum_probs=145.9
Q ss_pred ccCCcEEEEecc--------CCcHHHHHHHHHhhchhhHHhhhC-------CHHHHHHHHHHHHHHHHHHHHCCCeeccC
Q psy3880 8 AHSRVVVRVKEE--------GDDLKHLAAQVVDKGEAAVQDIIN-------SNPALRYIMRQLFEALEHVHNHSVVHRDL 72 (408)
Q Consensus 8 ~~~~~i~~~~~~--------~~~~~~lv~e~~~~g~~~l~~~~~-------~~~~~r~i~~qil~aL~~LH~~~IvHRDL 72 (408)
.|+|+ +.+... ..+..+++|||+.+|. |.+.+. ++..+..++.||+.||.|||++||+||||
T Consensus 71 ~h~~i-~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~--L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl 147 (282)
T cd06636 71 HHRNI-ATYYGAFIKKSPPGHDDQLWLVMEFCGAGS--VTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDI 147 (282)
T ss_pred CCCcE-EEEeeehhcccccCCCCEEEEEEEeCCCCc--HHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCC
Confidence 57764 455432 2356689999999987 766553 34668889999999999999999999999
Q ss_pred CCCcEEEecCCCEEEeccccchhcccC-cccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCC
Q psy3880 73 KPENILLDDQMNVKLTDFGFARVLKKG-EKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151 (408)
Q Consensus 73 Kp~NILl~~~~~iKl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf 151 (408)
||+||+++.++.++|+|||++...... .......|++.|+|||.+..... ....++.++|+||+||++|+|++|..||
T Consensus 148 ~~~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~-~~~~~~~~~DvwslG~~l~el~~g~~p~ 226 (282)
T cd06636 148 KGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDEN-PDATYDYRSDIWSLGITAIEMAEGAPPL 226 (282)
T ss_pred CHHHEEECCCCCEEEeeCcchhhhhccccCCCcccccccccCHhhcCcccC-cCcCCCcccchhHHHHHHHHHHhCCCCc
Confidence 999999999999999999998765422 12234678999999998863211 1245778899999999999999999988
Q ss_pred CCchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHH
Q psy3880 152 WHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLR 231 (408)
Q Consensus 152 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~ 231 (408)
........+..+
T Consensus 227 ~~~~~~~~~~~~-------------------------------------------------------------------- 238 (282)
T cd06636 227 CDMHPMRALFLI-------------------------------------------------------------------- 238 (282)
T ss_pred cccCHHhhhhhH--------------------------------------------------------------------
Confidence 543322111110
Q ss_pred HHHhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q psy3880 232 NIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFF 279 (408)
Q Consensus 232 ~i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf 279 (408)
.... ........++.++.+||++||..||.+|||+.|+|+||||
T Consensus 239 --~~~~--~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~~~~ 282 (282)
T cd06636 239 --PRNP--PPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKHPFI 282 (282)
T ss_pred --hhCC--CCCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhcCCCC
Confidence 0000 0011123468899999999999999999999999999997
No 151
>PHA03210 serine/threonine kinase US3; Provisional
Probab=99.97 E-value=2.6e-31 Score=275.86 Aligned_cols=223 Identities=23% Similarity=0.328 Sum_probs=147.9
Q ss_pred cccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC----------CHHHHHHHHHHHHHHHHHHHHCCCeeccCCC
Q psy3880 7 VAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN----------SNPALRYIMRQLFEALEHVHNHSVVHRDLKP 74 (408)
Q Consensus 7 ~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~----------~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp 74 (408)
+.|+|+| .+.+ +..+..|+|++++.+. +++.+. ...+++.++.||+.||+|||++|||||||||
T Consensus 220 l~HpnIv-~l~~~~~~~~~~~lv~e~~~~~---l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP 295 (501)
T PHA03210 220 LNHENIL-KIEEILRSEANTYMITQKYDFD---LYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKL 295 (501)
T ss_pred CCCCCcC-cEeEEEEECCeeEEEEeccccC---HHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCH
Confidence 5798855 5543 4455678888877543 333321 1256788999999999999999999999999
Q ss_pred CcEEEecCCCEEEeccccchhcccCcc--cccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCC
Q psy3880 75 ENILLDDQMNVKLTDFGFARVLKKGEK--LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFW 152 (408)
Q Consensus 75 ~NILl~~~~~iKl~DFGla~~~~~~~~--~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~ 152 (408)
+|||++.++.+||+|||++..+..... ....+||+.|+|||++.+ ..|+.++||||+||++|+|++|..++.
T Consensus 296 ~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwSlGvil~ell~~~~~p~ 369 (501)
T PHA03210 296 ENIFLNCDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAG------DGYCEITDIWSCGLILLDMLSHDFCPI 369 (501)
T ss_pred HHEEECCCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcC------CCCCcHHHHHHHHHHHHHHHHCCCCCc
Confidence 999999999999999999987654322 224679999999999864 457889999999999999999876544
Q ss_pred Cc---hhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCC-CCCCCchhHH
Q psy3880 153 HR---KQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGC-PPFWHRKQMV 228 (408)
Q Consensus 153 ~~---~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~-~Pf~~~~~~~ 228 (408)
.. +....+.++...... ...++.+. ..++|. .+... .+........
T Consensus 370 ~~~~~~~~~~~~~~~~~~~~-~~~~~p~~----------------------~~~~~~-------~i~~~~~~~~~~~~~~ 419 (501)
T PHA03210 370 GDGGGKPGKQLLKIIDSLSV-CDEEFPDP----------------------PCKLFD-------YIDSAEIDHAGHSVPP 419 (501)
T ss_pred cCCCCCHHHHHHHHHHhccc-ChhhcCCc----------------------HHHHHH-------HhhhhhcccCccchhh
Confidence 32 223333333322110 00001000 000000 00000 0000000000
Q ss_pred HHHHHHhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q psy3880 229 MLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPK 282 (408)
Q Consensus 229 ~~~~i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~ 282 (408)
.+. ...++.++.++|.+||++||++||||.|+|+||||...
T Consensus 420 ~~~-------------~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~f~~~ 460 (501)
T PHA03210 420 LIR-------------NLGLPADFEYPLVKMLTFDWHLRPGAAELLALPLFSAE 460 (501)
T ss_pred HHH-------------hcCCChHHHHHHHHHhccCcccCcCHHHHhhChhhhcC
Confidence 010 01357788999999999999999999999999999764
No 152
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=99.97 E-value=5.2e-31 Score=251.89 Aligned_cols=202 Identities=32% Similarity=0.536 Sum_probs=155.0
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC------CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcE
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN------SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENI 77 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~------~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NI 77 (408)
.+.|++++ ++.+ ..++..|+||||+.+|. |.+.+. ++++++.++.|++.||.|||++||+|+||||+||
T Consensus 58 ~l~h~~i~-~~~~~~~~~~~~~lv~e~~~~~~--L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni 134 (280)
T cd06611 58 ECKHPNIV-GLYEAYFYENKLWILIEFCDGGA--LDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNI 134 (280)
T ss_pred hCCCCcee-EEEEEEecCCeEEEEeeccCCCc--HHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhE
Confidence 46788755 5543 45567799999999998 666542 4578999999999999999999999999999999
Q ss_pred EEecCCCEEEeccccchhcccCc-ccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchh
Q psy3880 78 LLDDQMNVKLTDFGFARVLKKGE-KLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQ 156 (408)
Q Consensus 78 Ll~~~~~iKl~DFGla~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~ 156 (408)
+++.++.++|+|||++....... ......+++.|+|||.+...... ...++.++|+||+||++|+|++|.+||...+.
T Consensus 135 li~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~-~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~ 213 (280)
T cd06611 135 LLTLDGDVKLADFGVSAKNKSTLQKRDTFIGTPYWMAPEVVACETFK-DNPYDYKADIWSLGITLIELAQMEPPHHELNP 213 (280)
T ss_pred EECCCCCEEEccCccchhhcccccccceeecchhhcCHHHHhhcccC-CCCCCccccHHHHHHHHHHHHhCCCCcccCCH
Confidence 99999999999999987654321 22335689999999998643221 23467899999999999999999999976554
Q ss_pred HHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhc
Q psy3880 157 MVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEG 236 (408)
Q Consensus 157 ~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~ 236 (408)
...+.++..+ .+|.
T Consensus 214 ~~~~~~~~~~---------------------------------------------------~~~~--------------- 227 (280)
T cd06611 214 MRVLLKILKS---------------------------------------------------EPPT--------------- 227 (280)
T ss_pred HHHHHHHhcC---------------------------------------------------CCCC---------------
Confidence 4333333221 0110
Q ss_pred CCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q psy3880 237 KYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPK 282 (408)
Q Consensus 237 ~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~ 282 (408)
+. ....++.++.+||.+||..||.+|||++++|+||||...
T Consensus 228 ---~~--~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~ 268 (280)
T cd06611 228 ---LD--QPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKHPFVSDQ 268 (280)
T ss_pred ---cC--CcccCCHHHHHHHHHHhccChhhCcCHHHHhcChhhccc
Confidence 00 012467889999999999999999999999999999764
No 153
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.97 E-value=2.9e-31 Score=251.68 Aligned_cols=197 Identities=28% Similarity=0.444 Sum_probs=143.8
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC-----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEE
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN-----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENIL 78 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~-----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NIL 78 (408)
.+.|++++ .+.+ ..++..|+|+||+.+|. |.+.+. ++.++..++.|++.||+|||++||+||||||+||+
T Consensus 62 ~l~h~~ii-~~~~~~~~~~~~~lv~e~~~~~~--L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil 138 (267)
T cd06645 62 DCKHSNIV-AYFGSYLRRDKLWICMEFCGGGS--LQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANIL 138 (267)
T ss_pred hCCCCCee-eEEEEEEeCCEEEEEEeccCCCc--HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEE
Confidence 46788865 4443 44567799999999998 877653 45889999999999999999999999999999999
Q ss_pred EecCCCEEEeccccchhcccCc-ccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhH
Q psy3880 79 LDDQMNVKLTDFGFARVLKKGE-KLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 157 (408)
Q Consensus 79 l~~~~~iKl~DFGla~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~ 157 (408)
++.++.+||+|||++....... ......|++.|+|||++... ....++.++|+||+||++|+|++|..||....
T Consensus 139 i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~-- 213 (267)
T cd06645 139 LTDNGHVKLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVE---RKGGYNQLCDIWAVGITAIELAELQPPMFDLH-- 213 (267)
T ss_pred ECCCCCEEECcceeeeEccCcccccccccCcccccChhhhccc---cCCCCCchhhhHHHHHHHHHHhcCCCCccccc--
Confidence 9999999999999987654321 12346789999999987421 11345667788888888777777777764321
Q ss_pred HHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcC
Q psy3880 158 VMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 237 (408)
Q Consensus 158 ~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~ 237 (408)
.......+....
T Consensus 214 --------------------------------------------------------------------~~~~~~~~~~~~ 225 (267)
T cd06645 214 --------------------------------------------------------------------PMRALFLMTKSN 225 (267)
T ss_pred --------------------------------------------------------------------chhhHHhhhccC
Confidence 111111111111
Q ss_pred CCCCC-CcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCC
Q psy3880 238 YSFSS-PEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSF 278 (408)
Q Consensus 238 ~~f~~-~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpw 278 (408)
+..+. ..-..++..+++||.+||..||++|||++++++|||
T Consensus 226 ~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~~~ 267 (267)
T cd06645 226 FQPPKLKDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQHPF 267 (267)
T ss_pred CCCCcccccCCCCHHHHHHHHHHccCCchhCcCHHHHhcCCC
Confidence 11110 011246788999999999999999999999999998
No 154
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.97 E-value=4.7e-31 Score=255.28 Aligned_cols=197 Identities=28% Similarity=0.481 Sum_probs=149.3
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEE
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILL 79 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl 79 (408)
.+.|+|++ .+.+ ..++..|+||||+.||. |.+++. +..++..++.|++.||+|||++||+||||||+||++
T Consensus 73 ~~~h~~v~-~~~~~~~~~~~~~lv~e~~~~~~--L~~~~~~~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill 149 (296)
T cd06654 73 ENKNPNIV-NYLDSYLVGDELWVVMEYLAGGS--LTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL 149 (296)
T ss_pred hCCCCCEe-eEEEEEEeCCEEEEeecccCCCC--HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE
Confidence 46799855 5543 34557899999999998 877763 447889999999999999999999999999999999
Q ss_pred ecCCCEEEeccccchhcccCcc-cccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHH
Q psy3880 80 DDQMNVKLTDFGFARVLKKGEK-LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMV 158 (408)
Q Consensus 80 ~~~~~iKl~DFGla~~~~~~~~-~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~ 158 (408)
+.++.+||+|||++........ .....|++.|+|||.+.. ..++.++|+||+||++|+|++|..||.......
T Consensus 150 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~ 223 (296)
T cd06654 150 GMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTR------KAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR 223 (296)
T ss_pred cCCCCEEECccccchhccccccccCcccCCccccCHHHHcC------CCCCccchHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 9999999999999876543322 233578899999998864 335678888888888888888888885533211
Q ss_pred HHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCC
Q psy3880 159 MLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKY 238 (408)
Q Consensus 159 ~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~ 238 (408)
.. ..+....
T Consensus 224 ~~----------------------------------------------------------------------~~~~~~~- 232 (296)
T cd06654 224 AL----------------------------------------------------------------------YLIATNG- 232 (296)
T ss_pred hH----------------------------------------------------------------------HHHhcCC-
Confidence 00 0000000
Q ss_pred CCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q psy3880 239 SFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPK 282 (408)
Q Consensus 239 ~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~ 282 (408)
....+....++..+++||.+||..||++|||+.|+++||||...
T Consensus 233 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~~~~~~~ 276 (296)
T cd06654 233 TPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIA 276 (296)
T ss_pred CCCCCCccccCHHHHHHHHHHCcCCcccCcCHHHHhhChhhhcc
Confidence 00001123578889999999999999999999999999999764
No 155
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=99.97 E-value=3.7e-31 Score=254.79 Aligned_cols=221 Identities=28% Similarity=0.472 Sum_probs=156.6
Q ss_pred ccccCCcEEEEec--cCC--cHHHHHHHHHhhchhhHHhhh------CCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCC
Q psy3880 6 MVAHSRVVVRVKE--EGD--DLKHLAAQVVDKGEAAVQDII------NSNPALRYIMRQLFEALEHVHNHSVVHRDLKPE 75 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~--~~~~lv~e~~~~g~~~l~~~~------~~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~ 75 (408)
.+.|+|++ .+.. .++ +..|+|+||+.+ . |.+.+ .+..+++.++.||+.||+|||++||+|+||||+
T Consensus 60 ~l~h~ni~-~~~~~~~~~~~~~~~lv~e~~~~-~--L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~ 135 (293)
T cd07843 60 KLQHPNIV-TVKEVVVGSNLDKIYMVMEYVEH-D--LKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTS 135 (293)
T ss_pred hcCCCCEE-EEEEEEEecCCCcEEEEehhcCc-C--HHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHH
Confidence 45688855 5443 333 678999999985 3 44433 245789999999999999999999999999999
Q ss_pred cEEEecCCCEEEeccccchhcccC-cccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCc
Q psy3880 76 NILLDDQMNVKLTDFGFARVLKKG-EKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHR 154 (408)
Q Consensus 76 NILl~~~~~iKl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~ 154 (408)
||+++.++.+||+|||++...... .......+++.|+|||.+... ..++.++|+||+||++|+|++|.+||...
T Consensus 136 nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-----~~~~~~~Di~slG~~l~~l~~g~~~f~~~ 210 (293)
T cd07843 136 NLLLNNRGILKICDFGLAREYGSPLKPYTQLVVTLWYRAPELLLGA-----KEYSTAIDMWSVGCIFAELLTKKPLFPGK 210 (293)
T ss_pred HEEECCCCcEEEeecCceeeccCCccccccccccccccCchhhcCC-----ccccchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 999999999999999998876543 223345678899999988642 23578999999999999999999999988
Q ss_pred hhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHH
Q psy3880 155 KQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIM 234 (408)
Q Consensus 155 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~ 234 (408)
+....+.++...........|..... +..... . .+..
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~-------~--~~~~----------- 247 (293)
T cd07843 211 SEIDQLNKIFKLLGTPTEKIWPGFSE-----------------------LPGAKK-------K--TFTK----------- 247 (293)
T ss_pred ChHHHHHHHHHHhCCCchHHHHHhhc-----------------------cchhcc-------c--cccc-----------
Confidence 87777766654332221111111100 000000 0 0000
Q ss_pred hcCCCCCCCcCCC--CCccHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q psy3880 235 EGKYSFSSPEWND--ISEDPKDLIRKLLIVTPEDRYSVKEALNHSFF 279 (408)
Q Consensus 235 ~~~~~f~~~~~~~--iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf 279 (408)
..+......+.. +++.+++||++||+.||++|||++|+|+||||
T Consensus 248 -~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~~~f 293 (293)
T cd07843 248 -YPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKHPYF 293 (293)
T ss_pred -ccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcCCCC
Confidence 000000011122 58899999999999999999999999999998
No 156
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=99.97 E-value=4.9e-31 Score=249.18 Aligned_cols=198 Identities=28% Similarity=0.522 Sum_probs=153.5
Q ss_pred ccccCCcEEEEe-ccCCcHHHHHHHHHhhchhhHHhhhC--------CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCc
Q psy3880 6 MVAHSRVVVRVK-EEGDDLKHLAAQVVDKGEAAVQDIIN--------SNPALRYIMRQLFEALEHVHNHSVVHRDLKPEN 76 (408)
Q Consensus 6 ~~~~~~~i~~~~-~~~~~~~~lv~e~~~~g~~~l~~~~~--------~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~N 76 (408)
.+.|++++..+. .+.++..|+|+|++.||. |.+.+. ++..++.++.|++.||.|||++||+||||||+|
T Consensus 55 ~l~~~~i~~~~~~~~~~~~~~iv~e~~~~~~--l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~n 132 (267)
T cd06610 55 QCNHPNVVKYYTSFVVGDELWLVMPYLSGGS--LLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGN 132 (267)
T ss_pred hcCCCCEEEEEEEEeeCCEEEEEEeccCCCc--HHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHh
Confidence 468888653332 245566789999999997 766652 346789999999999999999999999999999
Q ss_pred EEEecCCCEEEeccccchhcccCccc-----ccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCC
Q psy3880 77 ILLDDQMNVKLTDFGFARVLKKGEKL-----MDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151 (408)
Q Consensus 77 ILl~~~~~iKl~DFGla~~~~~~~~~-----~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf 151 (408)
|++++++.++|+|||++..+...... ....|++.|+|||++... ..++.++|+||+||++++|++|..||
T Consensus 133 i~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~-----~~~~~~~Dv~slG~i~~~l~~g~~p~ 207 (267)
T cd06610 133 ILLGEDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQV-----HGYDFKADIWSFGITAIELATGAAPY 207 (267)
T ss_pred EEEcCCCCEEEcccchHHHhccCccccccccccccCChhhcChHHHccc-----cCcCcccchHhHhHHHHHHHhCCCCc
Confidence 99999999999999998876543221 235689999999998642 25678999999999999999999999
Q ss_pred CCchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHH
Q psy3880 152 WHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLR 231 (408)
Q Consensus 152 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~ 231 (408)
...+....+.++.... +|
T Consensus 208 ~~~~~~~~~~~~~~~~---------------------------------------------------~~----------- 225 (267)
T cd06610 208 SKYPPMKVLMLTLQND---------------------------------------------------PP----------- 225 (267)
T ss_pred cccChhhhHHHHhcCC---------------------------------------------------CC-----------
Confidence 7654433333322210 00
Q ss_pred HHHhcCCCCC-CCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q psy3880 232 NIMEGKYSFS-SPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFF 279 (408)
Q Consensus 232 ~i~~~~~~f~-~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf 279 (408)
.+. ...+..+++++++||.+||..||++|||++|+++||||
T Consensus 226 -------~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~p~~ 267 (267)
T cd06610 226 -------SLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKHKFF 267 (267)
T ss_pred -------CcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhhCCCC
Confidence 000 01135678899999999999999999999999999998
No 157
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.97 E-value=3.1e-31 Score=254.07 Aligned_cols=197 Identities=28% Similarity=0.456 Sum_probs=148.7
Q ss_pred cccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC-----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEE
Q psy3880 7 VAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN-----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILL 79 (408)
Q Consensus 7 ~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~-----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl 79 (408)
..|++++ .+.+ +..+..++||||+.||. |.+.+. ++.+++.++.|++.||+|||+++|+||||||+||++
T Consensus 54 ~~~~~i~-~~~~~~~~~~~~~~v~e~~~g~~--L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili 130 (278)
T cd05606 54 GDCPFIV-CMSYAFHTPDKLSFILDLMNGGD--LHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILL 130 (278)
T ss_pred CCCCcEe-eeeeeeecCCEEEEEEecCCCCc--HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEE
Confidence 3567644 5544 45567899999999998 766652 458899999999999999999999999999999999
Q ss_pred ecCCCEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHHH
Q psy3880 80 DDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVM 159 (408)
Q Consensus 80 ~~~~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~~ 159 (408)
+.++.+||+|||++....... ....+|+..|+|||++... ..++.++|+||+||++|+|++|..||......
T Consensus 131 ~~~~~~kl~dfg~~~~~~~~~-~~~~~~~~~y~aPE~~~~~-----~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~-- 202 (278)
T cd05606 131 DEHGHVRISDLGLACDFSKKK-PHASVGTHGYMAPEVLQKG-----VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK-- 202 (278)
T ss_pred CCCCCEEEccCcCccccCccC-CcCcCCCcCCcCcHHhcCC-----CCCCcccchHhHHHHHHHHHhCCCCCCCCCcc--
Confidence 999999999999987654322 2346799999999998632 34677888888888888888888888542110
Q ss_pred HHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCCC
Q psy3880 160 LRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYS 239 (408)
Q Consensus 160 ~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~~ 239 (408)
........+......
T Consensus 203 -----------------------------------------------------------------~~~~~~~~~~~~~~~ 217 (278)
T cd05606 203 -----------------------------------------------------------------DKHEIDRMTLTMAVE 217 (278)
T ss_pred -----------------------------------------------------------------chHHHHHHhhccCCC
Confidence 000011111111111
Q ss_pred CCCCcCCCCCccHHHHHHHhcccCCCCCC-----CHHHHHcCCCCCCCC
Q psy3880 240 FSSPEWNDISEDPKDLIRKLLIVTPEDRY-----SVKEALNHSFFHPKL 283 (408)
Q Consensus 240 f~~~~~~~iS~~~~dLI~klL~~dP~~R~-----ta~e~L~Hpwf~~~~ 283 (408)
+ +..+|.++++||++||..||.+|+ |++++++||||....
T Consensus 218 ~----~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~~~~~~~ 262 (278)
T cd05606 218 L----PDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFFRSLD 262 (278)
T ss_pred C----CCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCccccCCC
Confidence 1 234689999999999999999999 999999999998753
No 158
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.97 E-value=3.9e-31 Score=254.44 Aligned_cols=203 Identities=29% Similarity=0.444 Sum_probs=144.7
Q ss_pred HHHHHHHHhhchhhHHhhh----------CCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEec-CCCEEEecccc
Q psy3880 24 KHLAAQVVDKGEAAVQDII----------NSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDD-QMNVKLTDFGF 92 (408)
Q Consensus 24 ~~lv~e~~~~g~~~l~~~~----------~~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl~~-~~~iKl~DFGl 92 (408)
.|+||||+.++ |.+.+ .++..++.++.||+.||.|||++||+||||||+||+++. ++.+||+|||+
T Consensus 81 ~~lv~e~~~~~---l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~~~~~kl~dfg~ 157 (295)
T cd07837 81 LYLVFEYLDSD---LKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKGLLKIADLGL 157 (295)
T ss_pred EEEEeeccCcC---HHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecCCCeEEEeeccc
Confidence 68999999864 44433 245788999999999999999999999999999999998 88999999999
Q ss_pred chhcccC-cccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHHHHHHHHhccccCC
Q psy3880 93 ARVLKKG-EKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFS 171 (408)
Q Consensus 93 a~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~~~~~i~~~~~~~~ 171 (408)
+..+... .......+++.|+|||++... ..++.++|+||+||++|+|++|..||.+.+....+.++........
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-----~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~ 232 (295)
T cd07837 158 GRAFSIPVKSYTHEIVTLWYRAPEVLLGS-----THYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPT 232 (295)
T ss_pred ceecCCCccccCCcccccCCCChHHhhCC-----CCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCC
Confidence 8765332 122234678899999988542 3467899999999999999999999998877666666544221111
Q ss_pred CCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCCCCCCCcCCCCCcc
Q psy3880 172 SPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISED 251 (408)
Q Consensus 172 ~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~~f~~~~~~~iS~~ 251 (408)
...|.... -+... .-.+.+... ........++++
T Consensus 233 ~~~~~~~~------------------------------~~~~~-~~~~~~~~~---------------~~~~~~~~~~~~ 266 (295)
T cd07837 233 EQVWPGVS------------------------------KLRDW-HEFPQWKPQ---------------DLSRAVPDLSPE 266 (295)
T ss_pred hhhCcchh------------------------------hccch-hhcCcccch---------------hHHHhccccCHH
Confidence 11110000 00000 000000000 000111357889
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHcCCCCC
Q psy3880 252 PKDLIRKLLIVTPEDRYSVKEALNHSFFH 280 (408)
Q Consensus 252 ~~dLI~klL~~dP~~R~ta~e~L~Hpwf~ 280 (408)
+++||.+||..||++|||++|+|+||||+
T Consensus 267 ~~~~i~~~l~~~P~~R~~~~eil~~~~~~ 295 (295)
T cd07837 267 GLDLLQKMLRYDPAKRISAKAALTHPYFD 295 (295)
T ss_pred HHHHHHHHccCChhhcCCHHHHhcCCCcC
Confidence 99999999999999999999999999994
No 159
>KOG0671|consensus
Probab=99.97 E-value=8.8e-32 Score=257.30 Aligned_cols=142 Identities=29% Similarity=0.469 Sum_probs=112.6
Q ss_pred EEEEeccCC--cHHHHHHHHHhhchhhHHhhhCCH-------HHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEec--
Q psy3880 13 VVRVKEEGD--DLKHLAAQVVDKGEAAVQDIINSN-------PALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDD-- 81 (408)
Q Consensus 13 i~~~~~~~~--~~~~lv~e~~~~g~~~l~~~~~~~-------~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl~~-- 81 (408)
+|.+.+..+ ....||+|++. -. ++|.+.+. +.+|.+.+|++++++|||+.+++|-||||||||+.+
T Consensus 153 cv~m~~wFdyrghiCivfellG-~S--~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~ 229 (415)
T KOG0671|consen 153 CVQMRDWFDYRGHICIVFELLG-LS--TFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSE 229 (415)
T ss_pred EEeeehhhhccCceEEEEeccC-hh--HHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccc
Confidence 344444333 33445888772 13 77877552 799999999999999999999999999999999943
Q ss_pred ------------------CCCEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHH
Q psy3880 82 ------------------QMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYT 143 (408)
Q Consensus 82 ------------------~~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ 143 (408)
+..|+|+|||.|+.-... ..+.+.|..|+|||++.+ .+++.+|||||+|||++|
T Consensus 230 ~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~--hs~iVsTRHYRAPEViLg------LGwS~pCDvWSiGCIL~E 301 (415)
T KOG0671|consen 230 YFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEH--HSTIVSTRHYRAPEVILG------LGWSQPCDVWSIGCILVE 301 (415)
T ss_pred eEEEeccCCccceeccCCCcceEEEecCCcceeccC--cceeeeccccCCchheec------cCcCCccCceeeeeEEEE
Confidence 234899999999865443 356788999999999985 789999999999999999
Q ss_pred HHhCCCCCCCchhHH---HHHHHHh
Q psy3880 144 LLVGCPPFWHRKQMV---MLRNIME 165 (408)
Q Consensus 144 ll~G~~pf~~~~~~~---~~~~i~~ 165 (408)
+.+|...|+..+..+ +.+.|++
T Consensus 302 lytG~~LFqtHen~EHLaMMerIlG 326 (415)
T KOG0671|consen 302 LYTGETLFQTHENLEHLAMMERILG 326 (415)
T ss_pred eeccceecccCCcHHHHHHHHHhhC
Confidence 999999999887555 5555544
No 160
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=99.97 E-value=6e-31 Score=258.95 Aligned_cols=103 Identities=29% Similarity=0.478 Sum_probs=86.3
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEecCCCEEEeccccchhcccCccc---ccCCCCCcccChhhhhhccc
Q psy3880 46 PALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKL---MDLCGTPGYLAPEVLRANMF 122 (408)
Q Consensus 46 ~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl~~~~~iKl~DFGla~~~~~~~~~---~~~~gt~~y~aPE~l~~~~~ 122 (408)
.++..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.+...... ....+++.|+|||++..
T Consensus 174 ~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--- 250 (338)
T cd05102 174 EDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPESIFD--- 250 (338)
T ss_pred HHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccccCcHHhhc---
Confidence 456778999999999999999999999999999999999999999999865432211 12345678999999864
Q ss_pred cCcCCCCcchhhhhhhHHHHHHHh-CCCCCCCc
Q psy3880 123 EDATGYGQAVDVWACGVIMYTLLV-GCPPFWHR 154 (408)
Q Consensus 123 ~~~~~~~~~~DiwSlGvil~~ll~-G~~pf~~~ 154 (408)
..|+.++||||+||++|+|++ |..||.+.
T Consensus 251 ---~~~~~~sDiwslG~il~el~~~g~~pf~~~ 280 (338)
T cd05102 251 ---KVYTTQSDVWSFGVLLWEIFSLGASPYPGV 280 (338)
T ss_pred ---CCCCcccCHHHHHHHHHHHHhCCCCCCCCC
Confidence 357889999999999999997 99998654
No 161
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=99.97 E-value=2.5e-31 Score=287.43 Aligned_cols=195 Identities=29% Similarity=0.473 Sum_probs=149.7
Q ss_pred ccccCCcEEEEec----cCCcHHHHHHHHHhhchhhHHhhhC---------CHHHHHHHHHHHHHHHHHHHHC-------
Q psy3880 6 MVAHSRVVVRVKE----EGDDLKHLAAQVVDKGEAAVQDIIN---------SNPALRYIMRQLFEALEHVHNH------- 65 (408)
Q Consensus 6 ~~~~~~~i~~~~~----~~~~~~~lv~e~~~~g~~~l~~~~~---------~~~~~r~i~~qil~aL~~LH~~------- 65 (408)
.|.|+++| .+.+ ......||||||+.+|+ |.+.|. ++..+..|+.||+.||.|||+.
T Consensus 68 ~L~HPNIV-rl~d~f~de~~~~lyIVMEY~~gGS--L~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k 144 (1021)
T PTZ00266 68 ELKHKNIV-RYIDRFLNKANQKLYILMEFCDAGD--LSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGE 144 (1021)
T ss_pred HcCCCCcC-eEEEEEEecCCCEEEEEEeCCCCCc--HHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccC
Confidence 47799865 5443 34456899999999998 776653 4578899999999999999984
Q ss_pred CCeeccCCCCcEEEecC-----------------CCEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCC
Q psy3880 66 SVVHRDLKPENILLDDQ-----------------MNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGY 128 (408)
Q Consensus 66 ~IvHRDLKp~NILl~~~-----------------~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~ 128 (408)
+||||||||+|||++.. ..+||+|||++..+.........+||+.|+|||++... ...+
T Consensus 145 ~IVHRDLKPeNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge----~~~~ 220 (1021)
T PTZ00266 145 RVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHE----TKSY 220 (1021)
T ss_pred CceeccCcHHHeEeecCccccccccccccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhcc----CCCC
Confidence 49999999999999642 34899999999876544444456899999999998642 2357
Q ss_pred CcchhhhhhhHHHHHHHhCCCCCCCchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchh
Q psy3880 129 GQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACG 208 (408)
Q Consensus 129 ~~~~DiwSlGvil~~ll~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~G 208 (408)
+.++|||||||++|+|++|..||...+....+...+
T Consensus 221 s~KSDVWSLG~ILYELLTGk~PF~~~~~~~qli~~l-------------------------------------------- 256 (1021)
T PTZ00266 221 DDKSDMWALGCIIYELCSGKTPFHKANNFSQLISEL-------------------------------------------- 256 (1021)
T ss_pred CchhHHHHHHHHHHHHHHCCCCCCcCCcHHHHHHHH--------------------------------------------
Confidence 889999999999999999999996543322111111
Q ss_pred hhHHHhhcCCCCCCCchhHHHHHHHHhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCC
Q psy3880 209 VIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFH 280 (408)
Q Consensus 209 vily~ll~g~~Pf~~~~~~~~~~~i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~ 280 (408)
... ..++ ....|.++.+||.+||.+||.+|||+.|+|.|||+.
T Consensus 257 -------------------------k~~-p~lp---i~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik 299 (1021)
T PTZ00266 257 -------------------------KRG-PDLP---IKGKSKELNILIKNLLNLSAKERPSALQCLGYQIIK 299 (1021)
T ss_pred -------------------------hcC-CCCC---cCCCCHHHHHHHHHHhcCChhHCcCHHHHhccHHHh
Confidence 000 0111 123578899999999999999999999999999996
No 162
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=99.97 E-value=2.7e-31 Score=256.58 Aligned_cols=201 Identities=27% Similarity=0.497 Sum_probs=152.6
Q ss_pred ccccCCcEEEEec-cCCcHHHHHHHHHhhchhhHHhhhC----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEe
Q psy3880 6 MVAHSRVVVRVKE-EGDDLKHLAAQVVDKGEAAVQDIIN----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLD 80 (408)
Q Consensus 6 ~~~~~~~i~~~~~-~~~~~~~lv~e~~~~g~~~l~~~~~----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl~ 80 (408)
++.|+|++..+.. ...+..++||||+.+|. |.+++. +..++..++.||+.||+|||++||+||||||+||+++
T Consensus 75 ~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~--L~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~ 152 (292)
T cd06658 75 DYHHENVVDMYNSYLVGDELWVVMEFLEGGA--LTDIVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLT 152 (292)
T ss_pred hCCCCcHHHHHHheecCCeEEEEEeCCCCCc--HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEc
Confidence 4678886633322 34567799999999998 776652 4578999999999999999999999999999999999
Q ss_pred cCCCEEEeccccchhcccCc-ccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHHH
Q psy3880 81 DQMNVKLTDFGFARVLKKGE-KLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVM 159 (408)
Q Consensus 81 ~~~~iKl~DFGla~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~~ 159 (408)
.++.++|+|||++....... ......|++.|+|||.+.. ..++.++|+||+||++|+|++|+.||...+....
T Consensus 153 ~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~ 226 (292)
T cd06658 153 SDGRIKLSDFGFCAQVSKEVPKRKSLVGTPYWMAPEVISR------LPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQA 226 (292)
T ss_pred CCCCEEEccCcchhhcccccccCceeecCccccCHHHHcc------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 99999999999987653322 2234578999999998854 3467889999999999999999999866543332
Q ss_pred HHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCCC
Q psy3880 160 LRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYS 239 (408)
Q Consensus 160 ~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~~ 239 (408)
+..+... ..
T Consensus 227 ~~~~~~~-----------------------------------------------------------------------~~ 235 (292)
T cd06658 227 MRRIRDN-----------------------------------------------------------------------LP 235 (292)
T ss_pred HHHHHhc-----------------------------------------------------------------------CC
Confidence 2221110 00
Q ss_pred CCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCCCCC
Q psy3880 240 FSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFD 285 (408)
Q Consensus 240 f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~~~~ 285 (408)
...+....+++.+++||.+||..||++|||++|+|+||||.....+
T Consensus 236 ~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~~~~~~~ 281 (292)
T cd06658 236 PRVKDSHKVSSVLRGFLDLMLVREPSQRATAQELLQHPFLKLAGPP 281 (292)
T ss_pred CccccccccCHHHHHHHHHHccCChhHCcCHHHHhhChhhhccCCc
Confidence 0001112468889999999999999999999999999999865433
No 163
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=99.97 E-value=8.7e-31 Score=248.20 Aligned_cols=192 Identities=28% Similarity=0.500 Sum_probs=147.6
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC-----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEE
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN-----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENIL 78 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~-----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NIL 78 (408)
.+.|++++ .+.+ ...+..++|+||+.++. |.+++. +...++.++.|++.||+|||++|++||||||+||+
T Consensus 62 ~l~h~~i~-~~~~~~~~~~~~~lv~e~~~~~~--L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil 138 (267)
T cd06628 62 ELQHENIV-QYLGSSLDADHLNIFLEYVPGGS--VAALLNNYGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANIL 138 (267)
T ss_pred hcCCCCee-eEEEEEEeCCccEEEEEecCCCC--HHHHHHhccCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEE
Confidence 36788865 4443 45567889999999987 776663 34778899999999999999999999999999999
Q ss_pred EecCCCEEEeccccchhcccCc-------ccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCC
Q psy3880 79 LDDQMNVKLTDFGFARVLKKGE-------KLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151 (408)
Q Consensus 79 l~~~~~iKl~DFGla~~~~~~~-------~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf 151 (408)
+++++.++|+|||+++...... ......|++.|+|||.+.. ..++.++|+||+||++|+|++|..||
T Consensus 139 ~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~------~~~~~~~Dv~slG~il~~l~~g~~p~ 212 (267)
T cd06628 139 VDNKGGIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQ------TSYTRKADIWSLGCLVVEMLTGKHPF 212 (267)
T ss_pred EcCCCCEEecccCCCcccccccccCCccccccccCCCcCccChhHhcc------CCCCchhhhHHHHHHHHHHhhCCCCC
Confidence 9999999999999988665211 1123468899999999864 34567889999999999999999888
Q ss_pred CCchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHH
Q psy3880 152 WHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLR 231 (408)
Q Consensus 152 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~ 231 (408)
...+....+.++..
T Consensus 213 ~~~~~~~~~~~~~~------------------------------------------------------------------ 226 (267)
T cd06628 213 PDCTQLQAIFKIGE------------------------------------------------------------------ 226 (267)
T ss_pred CCccHHHHHHHHhc------------------------------------------------------------------
Confidence 65443222222111
Q ss_pred HHHhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q psy3880 232 NIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFF 279 (408)
Q Consensus 232 ~i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf 279 (408)
.. .......++.++++||++||+.||++|||+.|+++||||
T Consensus 227 ----~~---~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 267 (267)
T cd06628 227 ----NA---SPEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLKHPFL 267 (267)
T ss_pred ----cC---CCcCCcccCHHHHHHHHHHccCCchhCcCHHHHhhCCCC
Confidence 00 000112467899999999999999999999999999998
No 164
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=99.97 E-value=2.1e-31 Score=259.44 Aligned_cols=228 Identities=27% Similarity=0.439 Sum_probs=141.7
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC-------CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCc
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN-------SNPALRYIMRQLFEALEHVHNHSVVHRDLKPEN 76 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~-------~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~N 76 (408)
.+.|++++ .+.+ +.++..|+||||+.||. |.+.+. .+..++.++.|++.||+|||++|++|+||||+|
T Consensus 57 ~l~~~~i~-~~~~~~~~~~~~~lv~e~~~~~~--L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~N 133 (316)
T cd05574 57 TLDHPFLP-TLYASFQTETYLCLVMDYCPGGE--LFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPEN 133 (316)
T ss_pred hCCCCCch-hheeeeecCCEEEEEEEecCCCC--HHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHH
Confidence 56788755 4443 45566799999999998 777653 346788899999999999999999999999999
Q ss_pred EEEecCCCEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchh
Q psy3880 77 ILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQ 156 (408)
Q Consensus 77 ILl~~~~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~ 156 (408)
|+++.++.++|+|||++.............. .......... .+.
T Consensus 134 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~-~~~~~~~~~~--------~~~--------------------------- 177 (316)
T cd05574 134 ILLHESGHIMLSDFDLSKQSDVEPPPVSKAL-RKGSRRSSVN--------SIP--------------------------- 177 (316)
T ss_pred eEEcCCCCEEEeecchhhccccccccccccc-cccccccccc--------ccc---------------------------
Confidence 9999999999999999875432211000000 0000000000 000
Q ss_pred HHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhc
Q psy3880 157 MVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEG 236 (408)
Q Consensus 157 ~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~ 236 (408)
................+...|++||.+... .++.++|+||+||++|+|++|..||...+....+..+...
T Consensus 178 ----~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~------~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~ 247 (316)
T cd05574 178 ----SETFSEEPSFRSNSFVGTEEYIAPEVISGD------GHGSAVDWWTLGILLYEMLYGTTPFKGSNRDETFSNILKK 247 (316)
T ss_pred ----hhhhcccccCCCCCCcCccCCcCHHHHcCC------CCCchHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHhcC
Confidence 000000000000111122334555544321 2334555666666666666666666555544555555544
Q ss_pred CCCCCCCcCCCCCccHHHHHHHhcccCCCCCCC----HHHHHcCCCCCCCCC
Q psy3880 237 KYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYS----VKEALNHSFFHPKLF 284 (408)
Q Consensus 237 ~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~t----a~e~L~Hpwf~~~~~ 284 (408)
...++. ...++++++++|.+||..||++||| ++|+|+||||+...+
T Consensus 248 ~~~~~~--~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~~~~~~~~ 297 (316)
T cd05574 248 EVTFPG--SPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFFRGVNW 297 (316)
T ss_pred CccCCC--ccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCchhhcCCh
Confidence 444332 2337899999999999999999999 999999999987543
No 165
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=99.97 E-value=3e-31 Score=253.85 Aligned_cols=220 Identities=28% Similarity=0.468 Sum_probs=154.3
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC-------CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCc
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN-------SNPALRYIMRQLFEALEHVHNHSVVHRDLKPEN 76 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~-------~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~N 76 (408)
.+.|+|++ ++.+ ++++..++||||+.+ . |...+. +...+..++.|++.||+|||+++++||||+|+|
T Consensus 55 ~l~h~~i~-~~~~~~~~~~~~~~v~e~~~~-~--l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~n 130 (284)
T cd07860 55 ELNHPNIV-KLLDVIHTENKLYLVFEFLHQ-D--LKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 130 (284)
T ss_pred hcCCCCCc-chhhhcccCCcEEEEeecccc-C--HHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHH
Confidence 46788855 5554 455678999999964 4 554432 347889999999999999999999999999999
Q ss_pred EEEecCCCEEEeccccchhcccCc-ccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCch
Q psy3880 77 ILLDDQMNVKLTDFGFARVLKKGE-KLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRK 155 (408)
Q Consensus 77 ILl~~~~~iKl~DFGla~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~ 155 (408)
|+++.++.+||+|||++..+.... ......+++.|+|||.+.+. ..++.++|+||+||++|+|++|+.||.+.+
T Consensus 131 ill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-----~~~~~~~Dv~slG~il~~l~tg~~p~~~~~ 205 (284)
T cd07860 131 LLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC-----KYYSTAVDIWSLGCIFAEMVTRRALFPGDS 205 (284)
T ss_pred EEECCCCCEEEeeccchhhcccCccccccccccccccCCeEEecC-----CCCCcHHHHHHHHHHHHHHHHCCCCCCCCC
Confidence 999999999999999987654322 22334578899999987542 335788999999999999999999998877
Q ss_pred hHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHh
Q psy3880 156 QMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIME 235 (408)
Q Consensus 156 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~ 235 (408)
....+.++.+...... ..+|+- +..........|.+.... +..+
T Consensus 206 ~~~~~~~~~~~~~~~~------------------------------~~~~~~-~~~~~~~~~~~~~~~~~~---~~~~-- 249 (284)
T cd07860 206 EIDQLFRIFRTLGTPD------------------------------EVVWPG-VTSLPDYKPSFPKWARQD---FSKV-- 249 (284)
T ss_pred HHHHHHHHHHHhCCCC------------------------------hhhhhh-hhHHHHHHhhcccccccC---HHHH--
Confidence 6655555443221111 111110 000000000001110000 0000
Q ss_pred cCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q psy3880 236 GKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFF 279 (408)
Q Consensus 236 ~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf 279 (408)
...+++++++||.+||..||++|||++|+|+||||
T Consensus 250 ---------~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~f 284 (284)
T cd07860 250 ---------VPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPFF 284 (284)
T ss_pred ---------cccCCHHHHHHHHHhcCCCcccCCCHHHHhcCCCC
Confidence 13478899999999999999999999999999998
No 166
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=99.97 E-value=2.4e-31 Score=254.26 Aligned_cols=199 Identities=35% Similarity=0.545 Sum_probs=149.7
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhh-------CCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCc
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDII-------NSNPALRYIMRQLFEALEHVHNHSVVHRDLKPEN 76 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~-------~~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~N 76 (408)
.+.|++++ .+.+ +.++..|+|+||+.+|. |.+.+ .++.++..++.|++.||.|||++|++||||+|+|
T Consensus 49 ~l~~~~i~-~~~~~~~~~~~~~lv~e~~~~~~--L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~N 125 (277)
T cd05577 49 KVSSRFIV-SLAYAFETKDDLCLVMTLMNGGD--LKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPEN 125 (277)
T ss_pred hCCCCCEe-eeeeEEecCCeEEEEEecCCCCc--HHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHH
Confidence 35677755 4443 45567899999999998 76554 2447888999999999999999999999999999
Q ss_pred EEEecCCCEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchh
Q psy3880 77 ILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQ 156 (408)
Q Consensus 77 ILl~~~~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~ 156 (408)
|+++.++.+||+|||++.............++..|+|||++.+. .++.++|+||+||++|+|++|..||.....
T Consensus 126 il~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~y~~PE~~~~~------~~~~~~Di~slG~il~~l~~g~~p~~~~~~ 199 (277)
T cd05577 126 VLLDDHGNVRISDLGLAVELKGGKKIKGRAGTPGYMAPEVLQGE------VYDFSVDWFALGCTLYEMIAGRSPFRQRKE 199 (277)
T ss_pred EEECCCCCEEEccCcchhhhccCCccccccCCCCcCCHHHhcCC------CCCchhhhHHHHHHHHHHhhCCCCCCCCcc
Confidence 99999999999999999876544444456788899999998642 366788888888888888888888854321
Q ss_pred HHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhc
Q psy3880 157 MVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEG 236 (408)
Q Consensus 157 ~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~ 236 (408)
.. ....+...+...
T Consensus 200 ~~------------------------------------------------------------------~~~~~~~~~~~~ 213 (277)
T cd05577 200 KV------------------------------------------------------------------EKEELKRRTLEM 213 (277)
T ss_pred cc------------------------------------------------------------------cHHHHHhccccc
Confidence 00 000111111111
Q ss_pred CCCCCCCcCCCCCccHHHHHHHhcccCCCCCC-----CHHHHHcCCCCCCCC
Q psy3880 237 KYSFSSPEWNDISEDPKDLIRKLLIVTPEDRY-----SVKEALNHSFFHPKL 283 (408)
Q Consensus 237 ~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~-----ta~e~L~Hpwf~~~~ 283 (408)
+.......++++++||++||+.||++|| |+.++++||||....
T Consensus 214 ----~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h~~~~~~~ 261 (277)
T cd05577 214 ----AVEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREHPLFKDLN 261 (277)
T ss_pred ----cccCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHhChhhhcCC
Confidence 1122245689999999999999999999 899999999997643
No 167
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=99.97 E-value=8.9e-31 Score=251.68 Aligned_cols=221 Identities=25% Similarity=0.437 Sum_probs=151.0
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC------CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcE
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN------SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENI 77 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~------~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NI 77 (408)
.+.|++++ .+.+ +.++..|+||||+.+ + |.+.+. +...++.++.|++.||.|||++||+||||||+||
T Consensus 59 ~l~h~~i~-~~~~~~~~~~~~~lv~e~~~~-~--L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~ni 134 (291)
T cd07844 59 DLKHANIV-TLHDIIHTKKTLTLVFEYLDT-D--LKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNL 134 (291)
T ss_pred hCCCccee-eEEEEEecCCeEEEEEecCCC-C--HHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHE
Confidence 46788755 5543 455678999999985 5 665542 4478999999999999999999999999999999
Q ss_pred EEecCCCEEEeccccchhcccCc-ccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCch-
Q psy3880 78 LLDDQMNVKLTDFGFARVLKKGE-KLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRK- 155 (408)
Q Consensus 78 Ll~~~~~iKl~DFGla~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~- 155 (408)
+++.++.+||+|||+++...... ......+++.|+|||++.+. ..++.++|+||+||++|+|++|..||.+..
T Consensus 135 l~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-----~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~ 209 (291)
T cd07844 135 LISERGELKLADFGLARAKSVPSKTYSNEVVTLWYRPPDVLLGS-----TEYSTSLDMWGVGCIFYEMATGRPLFPGSTD 209 (291)
T ss_pred EEcCCCCEEECccccccccCCCCccccccccccccCCcHHhhcC-----cccCcHHHHHHHHHHHHHHHhCCCCCCCCcc
Confidence 99999999999999987543211 12234568899999988642 346789999999999999999999997665
Q ss_pred hHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHh
Q psy3880 156 QMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIME 235 (408)
Q Consensus 156 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~ 235 (408)
..+.+..+...........|... ...........++..... +.
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~~~~~~~~------~~- 252 (291)
T cd07844 210 VEDQLHKIFRVLGTPTEETWPGV------------------------------SSNPEFKPYSFPFYPPRP------LI- 252 (291)
T ss_pred HHHHHHHHHHhcCCCChhhhhhh------------------------------hhccccccccccccCChh------HH-
Confidence 33333333222111111111110 000000000001111000 00
Q ss_pred cCCCCCCCcCCCCC--ccHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q psy3880 236 GKYSFSSPEWNDIS--EDPKDLIRKLLIVTPEDRYSVKEALNHSFF 279 (408)
Q Consensus 236 ~~~~f~~~~~~~iS--~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf 279 (408)
..+..++ .++.+||.+||..||++|||+.|+|+||||
T Consensus 253 -------~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~~~f 291 (291)
T cd07844 253 -------NHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKHPYF 291 (291)
T ss_pred -------HhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 0111234 789999999999999999999999999998
No 168
>KOG0668|consensus
Probab=99.97 E-value=7.2e-31 Score=236.03 Aligned_cols=226 Identities=23% Similarity=0.425 Sum_probs=159.3
Q ss_pred ccCCcEEEEec----cCCcHHHHHHHHHhhchhhHHhhhCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEecC-
Q psy3880 8 AHSRVVVRVKE----EGDDLKHLAAQVVDKGEAAVQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQ- 82 (408)
Q Consensus 8 ~~~~~i~~~~~----~~~~~~~lv~e~~~~g~~~l~~~~~~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl~~~- 82 (408)
.|+|+| .+.+ .......||+|+++.-+....-...+..++++++.|+|.||.||||+||+|||+||.|++++..
T Consensus 91 gg~NIi-~L~DiV~Dp~SktpaLiFE~v~n~Dfk~ly~tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~~ 169 (338)
T KOG0668|consen 91 GGPNII-KLLDIVKDPESKTPSLIFEYVNNTDFKQLYPTLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHEL 169 (338)
T ss_pred CCCCee-ehhhhhcCccccCchhHhhhhccccHHHHhhhhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeechhh
Confidence 478755 5544 3334568999999988733333334568999999999999999999999999999999999854
Q ss_pred CCEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCC-chhHHHHH
Q psy3880 83 MNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH-RKQMVMLR 161 (408)
Q Consensus 83 ~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~-~~~~~~~~ 161 (408)
-.++|+|+|+|..+.++....-.+.+.+|--||.+.. ...|+...|+||+||.++.|+..+.||.. .+..+++-
T Consensus 170 rkLrlIDWGLAEFYHp~~eYnVRVASRyfKGPELLVd-----y~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLV 244 (338)
T KOG0668|consen 170 RKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVD-----YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 244 (338)
T ss_pred ceeeeeecchHhhcCCCceeeeeeehhhcCCchheee-----chhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHH
Confidence 5799999999999999887777889999999999874 35688999999999999999999999864 34444444
Q ss_pred HHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcC----
Q psy3880 162 NIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK---- 237 (408)
Q Consensus 162 ~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~---- 237 (408)
+|..--. .+.+.. -...|.-.- +| .+..|+...
T Consensus 245 kIakVLG---------------t~el~~----Yl~KY~i~L----------------dp--------~~~~i~~~~~rk~ 281 (338)
T KOG0668|consen 245 KIAKVLG---------------TDELYA----YLNKYQIDL----------------DP--------QFEDILGRHSRKP 281 (338)
T ss_pred HHHHHhC---------------hHHHHH----HHHHHccCC----------------Ch--------hHhhHhhcccccc
Confidence 4432100 000000 000000000 00 001111000
Q ss_pred -CCCCCCcC-CCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q psy3880 238 -YSFSSPEW-NDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPK 282 (408)
Q Consensus 238 -~~f~~~~~-~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~ 282 (408)
..|..++. .-+|+++.|||.++|.+|-.+|+||.||+.||||.+.
T Consensus 282 w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~HpyF~~~ 328 (338)
T KOG0668|consen 282 WSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHPYFAPV 328 (338)
T ss_pred HHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcCchHHHH
Confidence 01222222 2367999999999999999999999999999999753
No 169
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=99.97 E-value=6.5e-31 Score=258.78 Aligned_cols=226 Identities=26% Similarity=0.484 Sum_probs=154.4
Q ss_pred ccccCCcEEEEecc-------CCcHHHHHHHHHhhchhhHHhhhC----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCC
Q psy3880 6 MVAHSRVVVRVKEE-------GDDLKHLAAQVVDKGEAAVQDIIN----SNPALRYIMRQLFEALEHVHNHSVVHRDLKP 74 (408)
Q Consensus 6 ~~~~~~~i~~~~~~-------~~~~~~lv~e~~~~g~~~l~~~~~----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp 74 (408)
.+.|+|++ .+.+. .....|+|+||+.+ + +.+.+. ++..++.++.|++.||+|||++||+||||||
T Consensus 59 ~l~h~niv-~~~~~~~~~~~~~~~~~~lv~e~~~~-~--l~~~~~~~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp 134 (336)
T cd07849 59 RFKHENII-GILDIIRPPSFESFNDVYIVQELMET-D--LYKLIKTQHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKP 134 (336)
T ss_pred hCCCCCcC-chhheeecccccccceEEEEehhccc-C--HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCH
Confidence 45688754 54431 12345899999975 4 555543 4578999999999999999999999999999
Q ss_pred CcEEEecCCCEEEeccccchhcccCc----ccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCC
Q psy3880 75 ENILLDDQMNVKLTDFGFARVLKKGE----KLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPP 150 (408)
Q Consensus 75 ~NILl~~~~~iKl~DFGla~~~~~~~----~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~p 150 (408)
+|||++.++.+||+|||++....... .....+||+.|+|||.+... ..++.++|+||+||++|+|++|+.|
T Consensus 135 ~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-----~~~~~~~DvwslGvil~el~~G~~~ 209 (336)
T cd07849 135 SNLLLNTNCDLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNS-----KGYTKAIDIWSVGCILAEMLSNRPL 209 (336)
T ss_pred HHEEECCCCCEEECcccceeeccccccccCCcCCcCcCCCccChHHhhCC-----CCCCcHHHHHHHHHHHHHHHhCCCC
Confidence 99999999999999999987654322 12235789999999987532 3568899999999999999999999
Q ss_pred CCCchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHH
Q psy3880 151 FWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVML 230 (408)
Q Consensus 151 f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~ 230 (408)
|.+.+.......+....... .+|.+.... +....+ + + ...|+.....
T Consensus 210 f~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~-----------~~~~~~---~--~-~~~~~~~~~~---- 256 (336)
T cd07849 210 FPGKDYLHQLNLILGVLGTP------------SQEDLNCII-----------SLRARN---Y--I-KSLPFKPKVP---- 256 (336)
T ss_pred CCCCCHHHHHHHHHHHcCCC------------CHHHHHHhh-----------chhhhh---H--H-hhcCcCCccc----
Confidence 98876555444443221110 111110000 000000 0 0 0011100000
Q ss_pred HHHHhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCCC
Q psy3880 231 RNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKL 283 (408)
Q Consensus 231 ~~i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~~ 283 (408)
+ ......+|+++.|||.+||..||++|||+.|+++||||....
T Consensus 257 ---------~-~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~ 299 (336)
T cd07849 257 ---------W-NKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYH 299 (336)
T ss_pred ---------H-HHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccC
Confidence 0 000134688999999999999999999999999999998654
No 170
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.97 E-value=8e-31 Score=250.19 Aligned_cols=217 Identities=29% Similarity=0.469 Sum_probs=152.4
Q ss_pred ccCCcEEEEec--cCC--cHHHHHHHHHhhchhhHHhhhC------CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcE
Q psy3880 8 AHSRVVVRVKE--EGD--DLKHLAAQVVDKGEAAVQDIIN------SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENI 77 (408)
Q Consensus 8 ~~~~~i~~~~~--~~~--~~~~lv~e~~~~g~~~l~~~~~------~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NI 77 (408)
.|+|++ .+.+ .++ +..++|+||+.++ +.+.+. +..++..++.|++.||+|||++||+||||||+||
T Consensus 56 ~h~~i~-~~~~~~~~~~~~~~~lv~e~~~~~---l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni 131 (282)
T cd07831 56 PHPNIL-RLIEVLFDRKTGRLALVFELMDMN---LYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENI 131 (282)
T ss_pred CCCCcc-ceEEEEecCCCCcEEEEEecCCcc---HHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHE
Confidence 488755 4443 223 5679999999754 454442 4578999999999999999999999999999999
Q ss_pred EEecCCCEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhH
Q psy3880 78 LLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 157 (408)
Q Consensus 78 Ll~~~~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~ 157 (408)
+++. +.+||+|||++..+..........+++.|+|||.+... ..++.++|+||+||++|+|++|.+||.+.+..
T Consensus 132 ~l~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-----~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~ 205 (282)
T cd07831 132 LIKD-DILKLADFGSCRGIYSKPPYTEYISTRWYRAPECLLTD-----GYYGPKMDIWAVGCVFFEILSLFPLFPGTNEL 205 (282)
T ss_pred EEcC-CCeEEEecccccccccCCCcCCCCCCcccCChhHhhcC-----CCCCcchhHHHHHHHHHHHHcCCcCCCCCCHH
Confidence 9999 99999999999876554444456788999999987532 34578999999999999999999999888776
Q ss_pred HHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcC
Q psy3880 158 VMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 237 (408)
Q Consensus 158 ~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~ 237 (408)
+.+..+....... .+++ ....... .. ....+...... .+..+
T Consensus 206 ~~~~~~~~~~~~~------------~~~~-~~~~~~~------~~--------------~~~~~~~~~~~-~~~~~---- 247 (282)
T cd07831 206 DQIAKIHDVLGTP------------DAEV-LKKFRKS------RH--------------MNYNFPSKKGT-GLRKL---- 247 (282)
T ss_pred HHHHHHHHHcCCC------------CHHH-HHhhccc------cc--------------ccccCcccccc-cHHHH----
Confidence 6665554321110 0011 0000000 00 00000000000 00000
Q ss_pred CCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q psy3880 238 YSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFF 279 (408)
Q Consensus 238 ~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf 279 (408)
-..+|.++++||.+||..||++|||++++|+||||
T Consensus 248 -------~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~~~~ 282 (282)
T cd07831 248 -------LPNASAEGLDLLKKLLAYDPDERITAKQALRHPYF 282 (282)
T ss_pred -------cccccHHHHHHHHHHhccCcccccCHHHHhhCCCC
Confidence 12468999999999999999999999999999998
No 171
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=99.97 E-value=4.4e-31 Score=254.25 Aligned_cols=192 Identities=41% Similarity=0.704 Sum_probs=148.5
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC-----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEE
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN-----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENIL 78 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~-----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NIL 78 (408)
.+.|+|++ .+.+ ...+..|+||||+.+|. |.+.+. +...+..++.||+.||.|||++||+|+||+|.|||
T Consensus 57 ~l~h~~i~-~~~~~~~~~~~~~~v~e~~~~~~--L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nil 133 (290)
T cd05580 57 SIRHPFLV-NLYGSFQDDSNLYLVMEYVPGGE--LFSHLRKSGRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLL 133 (290)
T ss_pred hCCCCCcc-ceeeEEEcCCeEEEEEecCCCCC--HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEE
Confidence 35688755 5544 45567789999999998 877763 45788899999999999999999999999999999
Q ss_pred EecCCCEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHH
Q psy3880 79 LDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMV 158 (408)
Q Consensus 79 l~~~~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~ 158 (408)
++.++.+||+|||++...... ....+|++.|+|||.+.. ..++.++|+||+|+++|+|++|..||...+
T Consensus 134 i~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~~l~~g~~p~~~~~--- 202 (290)
T cd05580 134 LDSDGYIKITDFGFAKRVKGR--TYTLCGTPEYLAPEIILS------KGYGKAVDWWALGILIYEMLAGYPPFFDDN--- 202 (290)
T ss_pred ECCCCCEEEeeCCCccccCCC--CCCCCCCccccChhhhcC------CCCCccccHHHHHHHHHHHHhCCCCCCCCC---
Confidence 999999999999999876543 345678999999998753 234566777777777777777777764432
Q ss_pred HHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCC
Q psy3880 159 MLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKY 238 (408)
Q Consensus 159 ~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~ 238 (408)
.......+..+..
T Consensus 203 -------------------------------------------------------------------~~~~~~~~~~~~~ 215 (290)
T cd05580 203 -------------------------------------------------------------------PIQIYEKILEGKV 215 (290)
T ss_pred -------------------------------------------------------------------HHHHHHHHhcCCc
Confidence 2223333333333
Q ss_pred CCCCCcCCCCCccHHHHHHHhcccCCCCCC-----CHHHHHcCCCCCCC
Q psy3880 239 SFSSPEWNDISEDPKDLIRKLLIVTPEDRY-----SVKEALNHSFFHPK 282 (408)
Q Consensus 239 ~f~~~~~~~iS~~~~dLI~klL~~dP~~R~-----ta~e~L~Hpwf~~~ 282 (408)
.++ ..++++++++|.+||..||.+|+ +++|+++||||...
T Consensus 216 ~~~----~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~ 260 (290)
T cd05580 216 RFP----SFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWFAGI 260 (290)
T ss_pred cCC----ccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcCcccccC
Confidence 332 23588999999999999999999 89999999999764
No 172
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=99.97 E-value=7.6e-31 Score=253.01 Aligned_cols=223 Identities=26% Similarity=0.470 Sum_probs=159.0
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC------CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcE
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN------SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENI 77 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~------~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NI 77 (408)
.+.|++++ .+.+ .+.+..++||||+ +|. |.+.+. +..++..++.||++||.|||++||+|+||||+||
T Consensus 58 ~~~h~~i~-~~~~~~~~~~~~~lv~e~~-~~~--L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~ni 133 (298)
T cd07841 58 ELKHPNII-GLLDVFGHKSNINLVFEFM-ETD--LEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNL 133 (298)
T ss_pred hcCCCCCh-hhhheeecCCEEEEEEccc-CCC--HHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhE
Confidence 35688755 5444 3345679999999 777 766653 3478899999999999999999999999999999
Q ss_pred EEecCCCEEEeccccchhcccCc-ccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchh
Q psy3880 78 LLDDQMNVKLTDFGFARVLKKGE-KLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQ 156 (408)
Q Consensus 78 Ll~~~~~iKl~DFGla~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~ 156 (408)
+++.++.++|+|||++....... ......+++.|+|||.+... ..++.++|+||+||++|+|++|.+||.+.+.
T Consensus 134 ll~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-----~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~ 208 (298)
T cd07841 134 LIASDGVLKLADFGLARSFGSPNRKMTHQVVTRWYRAPELLFGA-----RHYGVGVDMWSVGCIFAELLLRVPFLPGDSD 208 (298)
T ss_pred EEcCCCCEEEccceeeeeccCCCccccccccceeeeCHHHHhCC-----CCCCcHHHHHHHHHHHHHHHcCCccccCCcc
Confidence 99999999999999997665432 22334568899999988532 3467899999999999999999999988877
Q ss_pred HHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhc
Q psy3880 157 MVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEG 236 (408)
Q Consensus 157 ~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~ 236 (408)
...+.++...........|...... .+ +......++..
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~--------~~~~~~~~~~~-------------- 246 (298)
T cd07841 209 IDQLGKIFEALGTPTEENWPGVTSL--------------------PD--------YVEFKPFPPTP-------------- 246 (298)
T ss_pred HHHHHHHHHHcCCCchhhhhhcccc--------------------cc--------cccccccCCcc--------------
Confidence 6666666542111111111000000 00 00000000000
Q ss_pred CCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCCC
Q psy3880 237 KYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKL 283 (408)
Q Consensus 237 ~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~~ 283 (408)
....+..++.++++||.+||..||++|||+.|+|+||||....
T Consensus 247 ----~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~~~~~~~~ 289 (298)
T cd07841 247 ----LKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPYFSNDP 289 (298)
T ss_pred ----hhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhCccccCCC
Confidence 0011245688999999999999999999999999999998764
No 173
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=99.97 E-value=4.7e-31 Score=252.64 Aligned_cols=203 Identities=23% Similarity=0.360 Sum_probs=150.1
Q ss_pred ccccCCcEEEEec-cCCcHHHHHHHHHhhchhhHHhhh-CCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEecCC
Q psy3880 6 MVAHSRVVVRVKE-EGDDLKHLAAQVVDKGEAAVQDII-NSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQM 83 (408)
Q Consensus 6 ~~~~~~~i~~~~~-~~~~~~~lv~e~~~~g~~~l~~~~-~~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl~~~~ 83 (408)
.+.|+|++..+.. +.++..++|+||+.+|. |.... .+++.+..++.|++.||+|||++||+|+||||+|||++.++
T Consensus 55 ~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~--l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~ 132 (279)
T cd06619 55 KCDSPYIIGFYGAFFVENRISICTEFMDGGS--LDVYRKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRG 132 (279)
T ss_pred hCCCCCeeeEEEEEEECCEEEEEEecCCCCC--hHHhhcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCC
Confidence 3678886633332 45566789999999997 43322 35678899999999999999999999999999999999999
Q ss_pred CEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHHHHHHH
Q psy3880 84 NVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI 163 (408)
Q Consensus 84 ~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~~~~~i 163 (408)
.++|+|||++..+... .....+||+.|+|||++.. ..++.++|+||+||++|+|++|..||.......
T Consensus 133 ~~~l~dfg~~~~~~~~-~~~~~~~~~~y~aPE~~~~------~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~----- 200 (279)
T cd06619 133 QVKLCDFGVSTQLVNS-IAKTYVGTNAYMAPERISG------EQYGIHSDVWSLGISFMELALGRFPYPQIQKNQ----- 200 (279)
T ss_pred CEEEeeCCcceecccc-cccCCCCChhhcCceeecC------CCCCCcchHHHHHHHHHHHHhCCCCchhhcccc-----
Confidence 9999999999765432 2334689999999998864 346789999999999999999999985421100
Q ss_pred HhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCCCCCCC
Q psy3880 164 MEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSP 243 (408)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~~f~~~ 243 (408)
....++ .....+..... ...
T Consensus 201 ----------------~~~~~~------------------------------------------~~~~~~~~~~~--~~~ 220 (279)
T cd06619 201 ----------------GSLMPL------------------------------------------QLLQCIVDEDP--PVL 220 (279)
T ss_pred ----------------cccchH------------------------------------------HHHHHHhccCC--CCC
Confidence 000000 00111111100 001
Q ss_pred cCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q psy3880 244 EWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPK 282 (408)
Q Consensus 244 ~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~ 282 (408)
.....++++++||.+||+.||++|||++|+++||||...
T Consensus 221 ~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~~~~~~ 259 (279)
T cd06619 221 PVGQFSEKFVHFITQCMRKQPKERPAPENLMDHPFIVQY 259 (279)
T ss_pred CCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcCcccccc
Confidence 123468899999999999999999999999999999764
No 174
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=99.97 E-value=1.2e-30 Score=251.24 Aligned_cols=203 Identities=28% Similarity=0.470 Sum_probs=153.6
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhh------CCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcE
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDII------NSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENI 77 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~------~~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NI 77 (408)
.+.|++++ .+.+ ..+...++||||+.||. |...+ .+...+..++.|++.||+|||++||+||||||+||
T Consensus 65 ~l~h~~i~-~~~~~~~~~~~~~lv~e~~~~~~--l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Ni 141 (292)
T cd06644 65 TCNHPYIV-KLLGAFYWDGKLWIMIEFCPGGA--VDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNV 141 (292)
T ss_pred hCCCCcEe-eeEEEEEeCCeEEEEEecCCCCc--HHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceE
Confidence 57898855 5544 45567899999999997 65443 24588899999999999999999999999999999
Q ss_pred EEecCCCEEEeccccchhcccC-cccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchh
Q psy3880 78 LLDDQMNVKLTDFGFARVLKKG-EKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQ 156 (408)
Q Consensus 78 Ll~~~~~iKl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~ 156 (408)
+++.++.+||+|||++...... .......+++.|+|||++...... ...++.++|+||+||++|+|++|..||...+.
T Consensus 142 li~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~ 220 (292)
T cd06644 142 LLTLDGDIKLADFGVSAKNVKTLQRRDSFIGTPYWMAPEVVMCETMK-DTPYDYKADIWSLGITLIEMAQIEPPHHELNP 220 (292)
T ss_pred EEcCCCCEEEccCccceeccccccccceecCCccccCceeecccccc-CCCCCchhhhHhHHHHHHHHhcCCCCCccccH
Confidence 9999999999999998654322 122345688999999998543211 24477899999999999999999999966544
Q ss_pred HHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhc
Q psy3880 157 MVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEG 236 (408)
Q Consensus 157 ~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~ 236 (408)
.....++..+. +|
T Consensus 221 ~~~~~~~~~~~---------------------------------------------------~~---------------- 233 (292)
T cd06644 221 MRVLLKIAKSE---------------------------------------------------PP---------------- 233 (292)
T ss_pred HHHHHHHhcCC---------------------------------------------------Cc----------------
Confidence 33322221110 00
Q ss_pred CCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCCC
Q psy3880 237 KYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKL 283 (408)
Q Consensus 237 ~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~~ 283 (408)
.. .....++.++.+||++||..||++|||++|+++||||....
T Consensus 234 --~~--~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 276 (292)
T cd06644 234 --TL--SQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEHPFVSSVT 276 (292)
T ss_pred --cC--CCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcCccccccc
Confidence 00 01124678899999999999999999999999999997643
No 175
>KOG0584|consensus
Probab=99.97 E-value=4.8e-31 Score=265.71 Aligned_cols=192 Identities=26% Similarity=0.507 Sum_probs=155.5
Q ss_pred cccCCcEEEEec-c-C--CcHHHHHHHHHhhchhhHHhhhCCH-----HHHHHHHHHHHHHHHHHHHCC--CeeccCCCC
Q psy3880 7 VAHSRVVVRVKE-E-G--DDLKHLAAQVVDKGEAAVQDIINSN-----PALRYIMRQLFEALEHVHNHS--VVHRDLKPE 75 (408)
Q Consensus 7 ~~~~~~i~~~~~-~-~--~~~~~lv~e~~~~g~~~l~~~~~~~-----~~~r~i~~qil~aL~~LH~~~--IvHRDLKp~ 75 (408)
|.|+|+| ++++ . + .....+|.|++++|. |..++... +.++.|++|||+||.|||++. |||||||.+
T Consensus 98 L~H~NIi-rfy~SW~d~~n~~in~iTEL~TSGt--Lr~Y~kk~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCD 174 (632)
T KOG0584|consen 98 LKHPNII-RFYDSWVDTDNKTINFITELFTSGT--LREYRKKHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCD 174 (632)
T ss_pred CCCCcee-eeeeheecCCCceeeeeeecccCCc--HHHHHHHhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccc
Confidence 8999855 6664 2 2 234679999999999 87776443 789999999999999999986 999999999
Q ss_pred cEEEec-CCCEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCc
Q psy3880 76 NILLDD-QMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHR 154 (408)
Q Consensus 76 NILl~~-~~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~ 154 (408)
||+++. .|.|||+|+|||..+..... ....|||.|||||+.. ..|+..+||||||+++.||+|+.+||.--
T Consensus 175 NIFinG~~G~VKIGDLGLAtl~r~s~a-ksvIGTPEFMAPEmYE-------E~YnE~VDVYaFGMCmLEMvT~eYPYsEC 246 (632)
T KOG0584|consen 175 NIFVNGNLGEVKIGDLGLATLLRKSHA-KSVIGTPEFMAPEMYE-------ENYNELVDVYAFGMCMLEMVTSEYPYSEC 246 (632)
T ss_pred eEEEcCCcCceeecchhHHHHhhcccc-ceeccCccccChHHHh-------hhcchhhhhhhhhHHHHHHHhccCChhhh
Confidence 999985 48999999999998776543 4489999999999885 46999999999999999999999999654
Q ss_pred h-hHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHH
Q psy3880 155 K-QMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI 233 (408)
Q Consensus 155 ~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i 233 (408)
. ..++.+++.+|. -|+.|
T Consensus 247 ~n~AQIYKKV~SGi---------------KP~sl---------------------------------------------- 265 (632)
T KOG0584|consen 247 TNPAQIYKKVTSGI---------------KPAAL---------------------------------------------- 265 (632)
T ss_pred CCHHHHHHHHHcCC---------------CHHHh----------------------------------------------
Confidence 3 445555555542 11111
Q ss_pred HhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q psy3880 234 MEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPK 282 (408)
Q Consensus 234 ~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~ 282 (408)
. +--.+++++||.+||.. .+.|+||.|+|+||||+.+
T Consensus 266 -------~----kV~dPevr~fIekCl~~-~~~R~sa~eLL~d~Ff~~d 302 (632)
T KOG0584|consen 266 -------S----KVKDPEVREFIEKCLAT-KSERLSAKELLKDPFFDED 302 (632)
T ss_pred -------h----ccCCHHHHHHHHHHhcC-chhccCHHHHhhChhhccc
Confidence 1 11267899999999998 9999999999999999875
No 176
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=99.97 E-value=8.7e-31 Score=257.68 Aligned_cols=223 Identities=26% Similarity=0.437 Sum_probs=156.6
Q ss_pred ccccCCcEEEEec------cCCcHHHHHHHHHhhchhhHHhhhC-----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCC
Q psy3880 6 MVAHSRVVVRVKE------EGDDLKHLAAQVVDKGEAAVQDIIN-----SNPALRYIMRQLFEALEHVHNHSVVHRDLKP 74 (408)
Q Consensus 6 ~~~~~~~i~~~~~------~~~~~~~lv~e~~~~g~~~l~~~~~-----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp 74 (408)
.+.|++++ .+.+ ......|+|+||+.+ . |.+.+. +..+++.++.||+.||.|||++||+||||||
T Consensus 60 ~l~h~~iv-~~~~~~~~~~~~~~~~~lv~e~~~~-~--l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp 135 (334)
T cd07855 60 HFKHDNII-AIRDILRPPGADFKDVYVVMDLMES-D--LHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKP 135 (334)
T ss_pred hcCCCCcc-CHHHhccccCCCCceEEEEEehhhh-h--HHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCH
Confidence 45688754 5443 123456899999964 4 666553 4588999999999999999999999999999
Q ss_pred CcEEEecCCCEEEeccccchhcccCc-----ccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCC
Q psy3880 75 ENILLDDQMNVKLTDFGFARVLKKGE-----KLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCP 149 (408)
Q Consensus 75 ~NILl~~~~~iKl~DFGla~~~~~~~-----~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~ 149 (408)
+||+++.++.+||+|||++....... ......|+..|+|||.+... ..++.++|+||+||++|+|++|+.
T Consensus 136 ~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~-----~~~~~~~Di~slG~~l~el~~g~~ 210 (334)
T cd07855 136 SNLLVNEDCELRIGDFGMARGLSSSPTEHKYFMTEYVATRWYRAPELLLSL-----PEYTTAIDMWSVGCIFAEMLGRRQ 210 (334)
T ss_pred HHEEEcCCCcEEecccccceeecccCcCCCcccccccccccccChHHhcCC-----cccccccchHHHHHHHHHHHcCCC
Confidence 99999999999999999987654321 11235788999999998542 347889999999999999999999
Q ss_pred CCCCchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHH
Q psy3880 150 PFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVM 229 (408)
Q Consensus 150 pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~ 229 (408)
||.+.+....+..+...... ..++.+.. +|+ ..
T Consensus 211 pf~~~~~~~~~~~~~~~~g~------------~~~~~~~~--------------~~~---------------------~~ 243 (334)
T cd07855 211 LFPGKNYVHQLKLILSVLGS------------PSEEVLNR--------------IGS---------------------DR 243 (334)
T ss_pred ccCCCChHHHHHHHHHHhCC------------ChhHhhhh--------------hch---------------------hh
Confidence 99887665554444331110 00111000 000 00
Q ss_pred HHHHHhcCCCCCCC----cCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCCCC
Q psy3880 230 LRNIMEGKYSFSSP----EWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLF 284 (408)
Q Consensus 230 ~~~i~~~~~~f~~~----~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~~~ 284 (408)
+............. .+..+++++++||++||+.||++|||++++++||||.....
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~~~~~ 302 (334)
T cd07855 244 VRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLAQYHD 302 (334)
T ss_pred HHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhhhhccC
Confidence 00000000001111 12457899999999999999999999999999999976543
No 177
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.97 E-value=4.5e-31 Score=255.54 Aligned_cols=197 Identities=27% Similarity=0.485 Sum_probs=149.4
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEE
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILL 79 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl 79 (408)
.+.|+|++ .+.+ ...+..|+|+||+.+|. |.+.+. +..++..++.|++.||+|||++|++||||||+||++
T Consensus 72 ~l~h~~iv-~~~~~~~~~~~~~lv~e~~~~~~--L~~~~~~~~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili 148 (296)
T cd06655 72 ELKNPNIV-NFLDSFLVGDELFVVMEYLAGGS--LTDVVTETCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLL 148 (296)
T ss_pred hcCCCcee-eeeeeEecCceEEEEEEecCCCc--HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE
Confidence 46788855 5554 44567899999999998 666543 458899999999999999999999999999999999
Q ss_pred ecCCCEEEeccccchhcccCcc-cccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHH
Q psy3880 80 DDQMNVKLTDFGFARVLKKGEK-LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMV 158 (408)
Q Consensus 80 ~~~~~iKl~DFGla~~~~~~~~-~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~ 158 (408)
+.++.+||+|||++........ .....+++.|+|||.+.. ..++.++|+||+||++|++++|..||.+.+...
T Consensus 149 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~ 222 (296)
T cd06655 149 GMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTR------KAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR 222 (296)
T ss_pred CCCCCEEEccCccchhcccccccCCCcCCCccccCcchhcC------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 9999999999999886654322 233578899999998754 335677888888888888888888775543221
Q ss_pred HHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCC
Q psy3880 159 MLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKY 238 (408)
Q Consensus 159 ~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~ 238 (408)
. ...+.....
T Consensus 223 ~----------------------------------------------------------------------~~~~~~~~~ 232 (296)
T cd06655 223 A----------------------------------------------------------------------LYLIATNGT 232 (296)
T ss_pred H----------------------------------------------------------------------HHHHHhcCC
Confidence 1 111111110
Q ss_pred CCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q psy3880 239 SFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPK 282 (408)
Q Consensus 239 ~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~ 282 (408)
........+++.+++||++||..||++|||+.++++||||...
T Consensus 233 -~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~~~~~~~ 275 (296)
T cd06655 233 -PELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFLKLA 275 (296)
T ss_pred -cccCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhhChHhhhc
Confidence 0011224578899999999999999999999999999999764
No 178
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=99.97 E-value=3e-30 Score=251.00 Aligned_cols=230 Identities=21% Similarity=0.314 Sum_probs=157.8
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC-----CHHHHHHHHHHHHHHHHHHHH-CCCeeccCCCCcE
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN-----SNPALRYIMRQLFEALEHVHN-HSVVHRDLKPENI 77 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~-----~~~~~r~i~~qil~aL~~LH~-~~IvHRDLKp~NI 77 (408)
.+.|+|+| ++.. ..++..++|+||+.||. |.+++. ++..++.++.|++.||.|||+ ++++||||||+||
T Consensus 55 ~l~h~~iv-~~~~~~~~~~~~~lv~ey~~~~~--L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~ni 131 (308)
T cd06615 55 ECNSPYIV-GFYGAFYSDGEISICMEHMDGGS--LDQVLKKAGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNI 131 (308)
T ss_pred hCCCCCCC-eEEEEEeeCCEEEEEeeccCCCc--HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHE
Confidence 36788865 4443 45567899999999998 887763 347889999999999999997 6999999999999
Q ss_pred EEecCCCEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhH
Q psy3880 78 LLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 157 (408)
Q Consensus 78 Ll~~~~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~ 157 (408)
|++.++.+||+|||++..+... .....+|++.|+|||.+.+ ..++.++|+||+||++|+|++|..||...+..
T Consensus 132 l~~~~~~~~l~dfg~~~~~~~~-~~~~~~~~~~~~aPE~~~~------~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~ 204 (308)
T cd06615 132 LVNSRGEIKLCDFGVSGQLIDS-MANSFVGTRSYMSPERLQG------THYTVQSDIWSLGLSLVEMAIGRYPIPPPDAK 204 (308)
T ss_pred EEecCCcEEEccCCCccccccc-ccccCCCCcCccChhHhcC------CCCCccchHHHHHHHHHHHHhCCCCCCCcchh
Confidence 9999999999999998765432 2245678999999998754 34678999999999999999999999776543
Q ss_pred HHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCC-chhHHHHHHHHhc
Q psy3880 158 VMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH-RKQMVMLRNIMEG 236 (408)
Q Consensus 158 ~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~-~~~~~~~~~i~~~ 236 (408)
.....+.........+... +.. .....+... ....+....+...
T Consensus 205 ~~~~~~~~~~~~~~~~~~~--------~~~---------------------------~~~~~~~~~~~~~~~~~~~~~~~ 249 (308)
T cd06615 205 ELEAMFGRPVSEGEAKESH--------RPV---------------------------SGHPPDSPRPMAIFELLDYIVNE 249 (308)
T ss_pred hHHHhhcCccccccccCCc--------ccc---------------------------cCCCCCccchhhHHHHHHHHhcC
Confidence 3222221110000000000 000 000000000 0011122222221
Q ss_pred CCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q psy3880 237 KYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPK 282 (408)
Q Consensus 237 ~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~ 282 (408)
... ...+..+++++++||.+||..||++|||+.|+++||||...
T Consensus 250 ~~~--~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~ 293 (308)
T cd06615 250 PPP--KLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIKRA 293 (308)
T ss_pred CCc--cCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhhc
Confidence 111 11122478899999999999999999999999999999763
No 179
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=99.97 E-value=1.1e-30 Score=247.37 Aligned_cols=194 Identities=27% Similarity=0.473 Sum_probs=149.8
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC-----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEE
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN-----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENIL 78 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~-----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NIL 78 (408)
.+.|+|++ .+.. ...+..++|+||+.||. |.+.+. +++.+..++.|++.||+|||+.+|+|+||||+||+
T Consensus 58 ~l~~~~i~-~~~~~~~~~~~~~lv~e~~~~~~--L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil 134 (265)
T cd06631 58 SLKHVNIV-QYLGTCLDDNTISIFMEFVPGGS--ISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVM 134 (265)
T ss_pred hcCCCCEe-eEeeEeecCCeEEEEEecCCCCc--HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEE
Confidence 46788855 5443 34567899999999998 777663 34788899999999999999999999999999999
Q ss_pred EecCCCEEEeccccchhcccC-------cccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCC
Q psy3880 79 LDDQMNVKLTDFGFARVLKKG-------EKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151 (408)
Q Consensus 79 l~~~~~iKl~DFGla~~~~~~-------~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf 151 (408)
++.++.++|+|||++...... .......|+..|+|||.+.. ..++.++|+||+||++|+|++|..||
T Consensus 135 ~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~------~~~~~~~Dv~slG~~~~~l~~g~~p~ 208 (265)
T cd06631 135 LMPNGIIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINE------SGYGRKSDIWSIGCTVFEMATGKPPL 208 (265)
T ss_pred ECCCCeEEeccchhhHhhhhccccccccccccccCCCccccChhhhcC------CCCcchhhHHHHHHHHHHHHhCCCcc
Confidence 999999999999998764321 11234568999999999864 34678999999999999999999999
Q ss_pred CCchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHH
Q psy3880 152 WHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLR 231 (408)
Q Consensus 152 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~ 231 (408)
...+.......+...
T Consensus 209 ~~~~~~~~~~~~~~~----------------------------------------------------------------- 223 (265)
T cd06631 209 ASMDRLAAMFYIGAH----------------------------------------------------------------- 223 (265)
T ss_pred ccCChHHHHHHhhhc-----------------------------------------------------------------
Confidence 654432222111110
Q ss_pred HHHhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q psy3880 232 NIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFF 279 (408)
Q Consensus 232 ~i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf 279 (408)
....+ +....++.++++||++||..||++|||+.|+|+||||
T Consensus 224 -----~~~~~-~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~ 265 (265)
T cd06631 224 -----RGLMP-RLPDSFSAAAIDFVTSCLTRDQHERPSALQLLRHDFL 265 (265)
T ss_pred -----cCCCC-CCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 00000 0112468899999999999999999999999999997
No 180
>KOG4279|consensus
Probab=99.97 E-value=6.2e-32 Score=273.03 Aligned_cols=201 Identities=26% Similarity=0.514 Sum_probs=156.8
Q ss_pred cccccCCcEEEEeccCC-cHHHHHHHHHhhchhhHHhhhCC--------HHHHHHHHHHHHHHHHHHHHCCCeeccCCCC
Q psy3880 5 EMVAHSRVVVRVKEEGD-DLKHLAAQVVDKGEAAVQDIINS--------NPALRYIMRQLFEALEHVHNHSVVHRDLKPE 75 (408)
Q Consensus 5 ~~~~~~~~i~~~~~~~~-~~~~lv~e~~~~g~~~l~~~~~~--------~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~ 75 (408)
..|-|-|+|..+-.-+. .++-|.||-+.||. |.+.+.+ +.++.+|.+|||+||.|||++.|||||||-+
T Consensus 627 ~~LrHkNIVrYLGs~senGf~kIFMEqVPGGS--LSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGD 704 (1226)
T KOG4279|consen 627 STLRHKNIVRYLGSVSENGFFKIFMEQVPGGS--LSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGD 704 (1226)
T ss_pred HHHhhHhHHHHhhccCCCCeEEEEeecCCCCc--HHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCC
Confidence 35678886644444333 35568899999999 8877754 3789999999999999999999999999999
Q ss_pred cEEEe-cCCCEEEeccccchhcccCc-ccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCC
Q psy3880 76 NILLD-DQMNVKLTDFGFARVLKKGE-KLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH 153 (408)
Q Consensus 76 NILl~-~~~~iKl~DFGla~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~ 153 (408)
|+|++ -.|.+||+|||-++.+..-. ...++.||..|||||++..+ ..+|++++|||||||++.||.||++||..
T Consensus 705 NVLvNTySGvlKISDFGTsKRLAginP~TETFTGTLQYMAPEvIDqG----~RGYG~aADIWS~GCT~vEMATGrPPF~E 780 (1226)
T KOG4279|consen 705 NVLVNTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDQG----PRGYGKAADIWSFGCTMVEMATGRPPFVE 780 (1226)
T ss_pred cEEEeeccceEEecccccchhhccCCccccccccchhhhChHhhccC----CcCCCchhhhhhccceeEeeccCCCCeee
Confidence 99997 57899999999988765433 23468899999999999764 57899999999999999999999999842
Q ss_pred chhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHH
Q psy3880 154 RKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI 233 (408)
Q Consensus 154 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i 233 (408)
--. +.+.|+..
T Consensus 781 lgs-------------------------------------------pqAAMFkV-------------------------- 791 (1226)
T KOG4279|consen 781 LGS-------------------------------------------PQAAMFKV-------------------------- 791 (1226)
T ss_pred cCC-------------------------------------------hhHhhhhh--------------------------
Confidence 110 01111111
Q ss_pred HhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q psy3880 234 MEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPK 282 (408)
Q Consensus 234 ~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~ 282 (408)
|-|....+-...+|.+|+.||.+|+..||.+||+|.++|..||++..
T Consensus 792 --GmyKvHP~iPeelsaeak~FilrcFepd~~~R~sA~~LL~DpFlq~~ 838 (1226)
T KOG4279|consen 792 --GMYKVHPPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQDPFLQHN 838 (1226)
T ss_pred --cceecCCCCcHHHHHHHHHHHHHHcCCCcccCccHHHhccCcccccC
Confidence 22222233334689999999999999999999999999999999875
No 181
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.97 E-value=5.5e-31 Score=256.05 Aligned_cols=230 Identities=24% Similarity=0.343 Sum_probs=155.0
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC-------CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCc
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN-------SNPALRYIMRQLFEALEHVHNHSVVHRDLKPEN 76 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~-------~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~N 76 (408)
.+.|+|++ .+.. ..++..|++|||+.+|. |.+.+. ++..++.+++|++.||+|||+++|+||||||+|
T Consensus 55 ~l~h~~i~-~~~~~~~~~~~~~~~~e~~~~~~--l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~N 131 (314)
T cd08216 55 QLQHPNIL-PYVTSFIVDSELYVVSPLMAYGS--CEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASH 131 (314)
T ss_pred hcCCcchh-hhhheeecCCeEEEEEeccCCCC--HHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcce
Confidence 46788755 4443 44566799999999997 766653 347889999999999999999999999999999
Q ss_pred EEEecCCCEEEeccccchhcccCcc--------cccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCC
Q psy3880 77 ILLDDQMNVKLTDFGFARVLKKGEK--------LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGC 148 (408)
Q Consensus 77 ILl~~~~~iKl~DFGla~~~~~~~~--------~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~ 148 (408)
|+++.++.+||+|||.+..+..... .....++..|+|||++... ...|+.++|+||+||++|+|++|.
T Consensus 132 ili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~----~~~~~~~~Diws~G~il~el~~g~ 207 (314)
T cd08216 132 ILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVKNLPWLSPEVLQQN----LQGYNEKSDIYSVGITACELANGH 207 (314)
T ss_pred EEEecCCceEEecCccceeeccccccccccccccccccccccccCHHHhcCC----CCCCCcchhHHHHHHHHHHHHhCC
Confidence 9999999999999998865432211 1234577789999998642 235788999999999999999999
Q ss_pred CCCCCchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHH
Q psy3880 149 PPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMV 228 (408)
Q Consensus 149 ~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~ 228 (408)
.||.+......+.....+..... -+.. ..| .+.+...-. ..++.......
T Consensus 208 ~pf~~~~~~~~~~~~~~~~~~~~----~~~~--~~~-----------------~~~~~~~~~-------~~~~~~~~~~~ 257 (314)
T cd08216 208 VPFKDMPATQMLLEKVRGTVPCL----LDKS--TYP-----------------LYEDSMSQS-------RSSNEHPNNRD 257 (314)
T ss_pred CCCCCCCHHHHHHHHHhccCccc----cccC--chh-----------------hhcCCcCcc-------cccccccchhh
Confidence 99987655443322222211100 0000 000 000000000 00000000000
Q ss_pred HHHHHHhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q psy3880 229 MLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPK 282 (408)
Q Consensus 229 ~~~~i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~ 282 (408)
......-..+|.++++||.+||+.||++|||++|+|+||||...
T Consensus 258 ----------~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~~~ 301 (314)
T cd08216 258 ----------SVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSFFKQC 301 (314)
T ss_pred ----------hhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCchHhhh
Confidence 00001112357789999999999999999999999999999754
No 182
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=99.97 E-value=4.6e-32 Score=255.19 Aligned_cols=198 Identities=36% Similarity=0.621 Sum_probs=148.6
Q ss_pred cccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC-----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEE
Q psy3880 7 VAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN-----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILL 79 (408)
Q Consensus 7 ~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~-----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl 79 (408)
+.|++++ ++.+ ..++..++|||++.+|. |.+.+. +..++..++.||+.||.+||++||+||||||+||++
T Consensus 55 l~~~~i~-~~~~~~~~~~~~~~v~~~~~~~~--L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~ 131 (260)
T PF00069_consen 55 LRHPNIV-QILDVFQDDNYLYIVMEYCPGGS--LQDYLQKNKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILL 131 (260)
T ss_dssp HTBTTBC-HEEEEEEESSEEEEEEEEETTEB--HHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEE
T ss_pred ccccccc-ccccccccccccccccccccccc--ccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 4788865 4443 33566789999999987 776654 348899999999999999999999999999999999
Q ss_pred ecCCCEEEeccccchhc-ccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHH
Q psy3880 80 DDQMNVKLTDFGFARVL-KKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMV 158 (408)
Q Consensus 80 ~~~~~iKl~DFGla~~~-~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~ 158 (408)
+.++.++|+|||.+... ..........+|+.|+|||++.. ...++.++|+||+|+++++|++|..||...+...
T Consensus 132 ~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-----~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~ 206 (260)
T PF00069_consen 132 DENGEVKLIDFGSSVKLSENNENFNPFVGTPEYMAPEVLQQ-----GKKYTRKSDIWSLGIILYELLTGKLPFEESNSDD 206 (260)
T ss_dssp STTSEEEESSGTTTEESTSTTSEBSSSSSSGGGSCHHHHTT-----TSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccc-----cccccccccccccccccccccccccccccccchh
Confidence 99999999999998753 22334456789999999999861 2456788999999999999999888886542111
Q ss_pred HHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCC
Q psy3880 159 MLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKY 238 (408)
Q Consensus 159 ~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~ 238 (408)
. ...+........
T Consensus 207 ~-------------------------------------------------------------------~~~~~~~~~~~~ 219 (260)
T PF00069_consen 207 Q-------------------------------------------------------------------LEIIEKILKRPL 219 (260)
T ss_dssp H-------------------------------------------------------------------HHHHHHHHHTHH
T ss_pred h-------------------------------------------------------------------hhhhhhcccccc
Confidence 1 111122222111
Q ss_pred CCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q psy3880 239 SFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFF 279 (408)
Q Consensus 239 ~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf 279 (408)
......+...+.++.+||++||..||++|||+.++++||||
T Consensus 220 ~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~~~~ 260 (260)
T PF00069_consen 220 PSSSQQSREKSEELRDLIKKMLSKDPEQRPSAEELLKHPWF 260 (260)
T ss_dssp HHHTTSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTSGGG
T ss_pred cccccccchhHHHHHHHHHHHccCChhHCcCHHHHhcCCCC
Confidence 11111122234789999999999999999999999999997
No 183
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=99.97 E-value=9.6e-31 Score=249.29 Aligned_cols=195 Identities=30% Similarity=0.503 Sum_probs=152.0
Q ss_pred cccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEe
Q psy3880 7 VAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLD 80 (408)
Q Consensus 7 ~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl~ 80 (408)
+.|+|++ .+.+ .++...|+|+||+.+|. |.+.+. +...+..++.|++.||.|||+++++||||+|+||+++
T Consensus 56 l~h~~i~-~~~~~~~~~~~~~~v~e~~~~~~--L~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~ 132 (274)
T cd06609 56 CRSPYIT-KYYGSFLKGSKLWIIMEYCGGGS--CLDLLKPGKLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLS 132 (274)
T ss_pred cCCCCee-eeeEEEEECCeEEEEEEeeCCCc--HHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEC
Confidence 5799855 4443 44566789999999998 777764 3478999999999999999999999999999999999
Q ss_pred cCCCEEEeccccchhcccC-cccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHHH
Q psy3880 81 DQMNVKLTDFGFARVLKKG-EKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVM 159 (408)
Q Consensus 81 ~~~~iKl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~~ 159 (408)
+++.++|+|||++..+... .......+++.|+|||.+.+. .++.++|+||+||++|+|++|..||...+....
T Consensus 133 ~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~------~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~ 206 (274)
T cd06609 133 EEGDVKLADFGVSGQLTSTMSKRNTFVGTPFWMAPEVIKQS------GYDEKADIWSLGITAIELAKGEPPLSDLHPMRV 206 (274)
T ss_pred CCCCEEEcccccceeecccccccccccCCccccChhhhccC------CCCchhhHHHHHHHHHHHHhCCCCcccCchHHH
Confidence 9999999999999876543 223346788999999998642 367889999999999999999999865433222
Q ss_pred HHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCCC
Q psy3880 160 LRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYS 239 (408)
Q Consensus 160 ~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~~ 239 (408)
...+..+ .+| .
T Consensus 207 ~~~~~~~---------------------------------------------------~~~------------------~ 217 (274)
T cd06609 207 LFLIPKN---------------------------------------------------NPP------------------S 217 (274)
T ss_pred HHHhhhc---------------------------------------------------CCC------------------C
Confidence 2211110 000 0
Q ss_pred CCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q psy3880 240 FSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPK 282 (408)
Q Consensus 240 f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~ 282 (408)
. + ...+++++.++|.+||..||++|||++++++||||...
T Consensus 218 ~--~-~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~~~~~~~ 257 (274)
T cd06609 218 L--E-GNKFSKPFKDFVSLCLNKDPKERPSAKELLKHKFIKKA 257 (274)
T ss_pred C--c-ccccCHHHHHHHHHHhhCChhhCcCHHHHhhChhhcCC
Confidence 0 1 11267889999999999999999999999999999764
No 184
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=99.97 E-value=1.1e-30 Score=253.53 Aligned_cols=197 Identities=32% Similarity=0.578 Sum_probs=142.1
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC-----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEE
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN-----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENIL 78 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~-----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NIL 78 (408)
.+.|++++ .+.. +.++..++||||+.||. |.+.+. ++..+..++.|++.||+|||++|++||||||+||+
T Consensus 57 ~~~~~~i~-~~~~~~~~~~~~~lv~e~~~g~~--L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIl 133 (305)
T cd05609 57 FAENPFVV-SMFCSFETKRHLCMVMEYVEGGD--CATLLKNIGALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLL 133 (305)
T ss_pred hCCCCCee-eeEEEEecCCEEEEEEecCCCCc--HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEE
Confidence 46788755 5554 44556799999999998 776663 44778889999999999999999999999999999
Q ss_pred EecCCCEEEeccccchhcccCc----------------ccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHH
Q psy3880 79 LDDQMNVKLTDFGFARVLKKGE----------------KLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMY 142 (408)
Q Consensus 79 l~~~~~iKl~DFGla~~~~~~~----------------~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~ 142 (408)
++.++.+||+|||+++...... ......++..|+|||.+.. ..++.++|+||+||++|
T Consensus 134 l~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~vl~ 207 (305)
T cd05609 134 ITSMGHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILR------QGYGKPVDWWAMGIILY 207 (305)
T ss_pred ECCCCCEEEeeCCCccccCcCccccccccccccchhhccccCCccCccccCchhccC------CCCCchhhHHHHHHHHH
Confidence 9999999999999886421100 0012356677888887643 23455666666666666
Q ss_pred HHHhCCCCCCCchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCC
Q psy3880 143 TLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFW 222 (408)
Q Consensus 143 ~ll~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~ 222 (408)
++++|..||.+
T Consensus 208 el~~g~~pf~~--------------------------------------------------------------------- 218 (305)
T cd05609 208 EFLVGCVPFFG--------------------------------------------------------------------- 218 (305)
T ss_pred HHHhCCCCCCC---------------------------------------------------------------------
Confidence 66666666543
Q ss_pred CchhHHHHHHHHhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCC---HHHHHcCCCCCCC
Q psy3880 223 HRKQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYS---VKEALNHSFFHPK 282 (408)
Q Consensus 223 ~~~~~~~~~~i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~t---a~e~L~Hpwf~~~ 282 (408)
....+....+..+...++...+ .++++++++|.+||..||++||| +.++|+||||...
T Consensus 219 -~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~~~~~~ 279 (305)
T cd05609 219 -DTPEELFGQVISDDIEWPEGDE-ALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRFFLGL 279 (305)
T ss_pred -CCHHHHHHHHHhcccCCCCccc-cCCHHHHHHHHHHhccChhhccCccCHHHHHhCccccCC
Confidence 3333344444444433333332 57889999999999999999998 7999999999653
No 185
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.97 E-value=1.3e-30 Score=255.82 Aligned_cols=242 Identities=19% Similarity=0.272 Sum_probs=155.7
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC-------CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCc
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN-------SNPALRYIMRQLFEALEHVHNHSVVHRDLKPEN 76 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~-------~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~N 76 (408)
.+.|+|++ .+.+ +..+..++|+||+.+|. +.+.+. ++..++.++.|++.||+|||++||+||||||+|
T Consensus 55 ~l~h~niv-~~~~~~~~~~~~~~v~e~~~~~~--l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~N 131 (328)
T cd08226 55 FFRHPNIM-TSWTVFTTGSWLWVISPFMAYGS--ANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASH 131 (328)
T ss_pred hCCCCCcc-eEeeeEecCCceEEEEecccCCC--HHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHH
Confidence 36798855 5544 45567899999999988 666553 447788999999999999999999999999999
Q ss_pred EEEecCCCEEEeccccchhcccCc-cc-------ccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCC
Q psy3880 77 ILLDDQMNVKLTDFGFARVLKKGE-KL-------MDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGC 148 (408)
Q Consensus 77 ILl~~~~~iKl~DFGla~~~~~~~-~~-------~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~ 148 (408)
||++.++.++++||+.+....... .. ....++..|+|||++... ...++.++|+||+||++|+|++|.
T Consensus 132 ill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~----~~~~~~~~DiwslG~~l~el~~g~ 207 (328)
T cd08226 132 ILISGDGLVSLSGLSHLYSLVRNGQKAKVVYDFPQFSTSVLPWLSPELLRQD----LYGYNVKSDIYSVGITACELATGR 207 (328)
T ss_pred EEEeCCCcEEEechHHHhhhhccCccccccccccccccCccCccChhhhcCC----CCCCCchhhHHHHHHHHHHHHhCC
Confidence 999999999999998654332111 00 012345679999998653 234788999999999999999999
Q ss_pred CCCCCchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHH
Q psy3880 149 PPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMV 228 (408)
Q Consensus 149 ~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~ 228 (408)
.||.+......+..+..+....... ....|..... ... ...-+..++.--.+..+...+
T Consensus 208 ~p~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~-~~~-------~~~~~~~~~~~~~~~~~~~~~------- 266 (328)
T cd08226 208 VPFQDMLRTQMLLQKLKGPPYSPLD------ITTFPCEESR-MKN-------SQSGVDSGIGESVVAAGMTQT------- 266 (328)
T ss_pred CCCCCcChHHHHHHHhcCCCCCCcc------ccccchhhhh-hcc-------chhhhhcccccchhccccccc-------
Confidence 9998877666555554432210000 0000000000 000 000000000000000000000
Q ss_pred HHHHHHhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCC
Q psy3880 229 MLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHP 281 (408)
Q Consensus 229 ~~~~i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~ 281 (408)
+.. .....+.+...++++++||++||+.||++|||++|+|+||||..
T Consensus 267 ----~~~--~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~ 313 (328)
T cd08226 267 ----MTS--ERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQ 313 (328)
T ss_pred ----ccc--ccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHH
Confidence 000 00111223456789999999999999999999999999999954
No 186
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=99.97 E-value=1.1e-30 Score=245.44 Aligned_cols=193 Identities=25% Similarity=0.432 Sum_probs=145.7
Q ss_pred ccccCCcEEEEec-cCCcHHHHHHHHHhhchhhHHhhhCC-------HHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcE
Q psy3880 6 MVAHSRVVVRVKE-EGDDLKHLAAQVVDKGEAAVQDIINS-------NPALRYIMRQLFEALEHVHNHSVVHRDLKPENI 77 (408)
Q Consensus 6 ~~~~~~~i~~~~~-~~~~~~~lv~e~~~~g~~~l~~~~~~-------~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NI 77 (408)
.+.|+|++.-+.. ..++..|+|+||+.|+. |.+.+.+ ...+..++.|++.||.|||++||+|+||||+||
T Consensus 55 ~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~--L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~ni 132 (256)
T cd08529 55 KLDSSYIIRYYESFLDKGKLNIVMEYAENGD--LHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNL 132 (256)
T ss_pred hcCCCCeehheeeeccCCEEEEEEEeCCCCc--HHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceE
Confidence 4679986633322 44566799999999998 7776633 367788999999999999999999999999999
Q ss_pred EEecCCCEEEeccccchhcccCcc-cccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchh
Q psy3880 78 LLDDQMNVKLTDFGFARVLKKGEK-LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQ 156 (408)
Q Consensus 78 Ll~~~~~iKl~DFGla~~~~~~~~-~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~ 156 (408)
+++.++.++|+|||++..+..... ....+|++.|+|||++.. ..++.++|+|||||++++|++|..||...+.
T Consensus 133 li~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~~l~~g~~p~~~~~~ 206 (256)
T cd08529 133 FLDAYDNVKIGDLGVAKLLSDNTNFANTIVGTPYYLSPELCED------KPYNEKSDVWALGVVLYECCTGKHPFDANNQ 206 (256)
T ss_pred EEeCCCCEEEcccccceeccCccchhhccccCccccCHHHhcC------CCCCCccchHHHHHHHHHHHhCCCCCCCCCH
Confidence 999999999999999887654332 234578899999998864 2356677777777777777777777754432
Q ss_pred HHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhc
Q psy3880 157 MVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEG 236 (408)
Q Consensus 157 ~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~ 236 (408)
. .....+..+
T Consensus 207 ~----------------------------------------------------------------------~~~~~~~~~ 216 (256)
T cd08529 207 G----------------------------------------------------------------------ALILKIIRG 216 (256)
T ss_pred H----------------------------------------------------------------------HHHHHHHcC
Confidence 2 222233332
Q ss_pred CCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q psy3880 237 KYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFF 279 (408)
Q Consensus 237 ~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf 279 (408)
...... ..++.+++++|.+||+.||++||++.++++|||+
T Consensus 217 ~~~~~~---~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 256 (256)
T cd08529 217 VFPPVS---QMYSQQLAQLIDQCLTKDYRQRPDTFQLLRNPSL 256 (256)
T ss_pred CCCCCc---cccCHHHHHHHHHHccCCcccCcCHHHHhhCCCC
Confidence 221111 1467889999999999999999999999999995
No 187
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.97 E-value=7.6e-31 Score=251.55 Aligned_cols=202 Identities=23% Similarity=0.387 Sum_probs=147.3
Q ss_pred cccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC--------CHHHHHHHHHHHHHHHHHHHH-CCCeeccCCCC
Q psy3880 7 VAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN--------SNPALRYIMRQLFEALEHVHN-HSVVHRDLKPE 75 (408)
Q Consensus 7 ~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~--------~~~~~r~i~~qil~aL~~LH~-~~IvHRDLKp~ 75 (408)
+.|+|++ .+.+ ..++..|+||||+.|+. |...+. ++..++.++.|++.||.|||+ +||+||||||+
T Consensus 56 ~~~~~i~-~~~~~~~~~~~~~lv~e~~~~~~--l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~ 132 (286)
T cd06622 56 AVSPYIV-DFYGAFFIEGAVYMCMEYMDAGS--LDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPT 132 (286)
T ss_pred cCCCcHH-hhhhheecCCeEEEEEeecCCCC--HHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHH
Confidence 5687754 5554 34567899999999998 655432 457899999999999999997 59999999999
Q ss_pred cEEEecCCCEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCch
Q psy3880 76 NILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRK 155 (408)
Q Consensus 76 NILl~~~~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~ 155 (408)
||+++.++.+||+|||++..+... ......+++.|+|||.+..........++.++|+||+||++|+|++|..||....
T Consensus 133 nil~~~~~~~~l~dfg~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~ 211 (286)
T cd06622 133 NVLVNGNGQVKLCDFGVSGNLVAS-LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPET 211 (286)
T ss_pred HEEECCCCCEEEeecCCcccccCC-ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcc
Confidence 999999999999999998765432 2234568889999999865432222345667777777777777777777774322
Q ss_pred hHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHh
Q psy3880 156 QMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIME 235 (408)
Q Consensus 156 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~ 235 (408)
..... ..+..+..
T Consensus 212 ~~~~~-------------------------------------------------------------------~~~~~~~~ 224 (286)
T cd06622 212 YANIF-------------------------------------------------------------------AQLSAIVD 224 (286)
T ss_pred hhhHH-------------------------------------------------------------------HHHHHHhh
Confidence 11110 01112222
Q ss_pred cCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q psy3880 236 GKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPK 282 (408)
Q Consensus 236 ~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~ 282 (408)
+.. ......+++++++||.+||+.||++|||++++++||||...
T Consensus 225 ~~~---~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~~~~~~ 268 (286)
T cd06622 225 GDP---PTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHPWLVKY 268 (286)
T ss_pred cCC---CCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcChhhhhc
Confidence 211 11223578999999999999999999999999999999765
No 188
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=99.97 E-value=3.2e-30 Score=246.43 Aligned_cols=200 Identities=27% Similarity=0.403 Sum_probs=148.5
Q ss_pred cccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhh------CCHHHHHHHHHHHHHHHHHHHHC-CCeeccCCCCcE
Q psy3880 7 VAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDII------NSNPALRYIMRQLFEALEHVHNH-SVVHRDLKPENI 77 (408)
Q Consensus 7 ~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~------~~~~~~r~i~~qil~aL~~LH~~-~IvHRDLKp~NI 77 (408)
+.|+|+| ++.. ..++..|+||||+.|.-..++... .++..+..++.||+.||+|||++ +++||||||+||
T Consensus 57 ~~~~~iv-~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~ni 135 (283)
T cd06617 57 VDCPYTV-TFYGALFREGDVWICMEVMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNV 135 (283)
T ss_pred cCCCCee-eeeEEEecCCcEEEEhhhhcccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHE
Confidence 5678755 5443 445668999999986532233321 24578899999999999999998 999999999999
Q ss_pred EEecCCCEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCch-h
Q psy3880 78 LLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRK-Q 156 (408)
Q Consensus 78 Ll~~~~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~-~ 156 (408)
|++.++.+||+|||++.............|+..|+|||.+..... ...++.++|+||+||++|+|++|..||.... .
T Consensus 136 l~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~--~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~ 213 (283)
T cd06617 136 LINRNGQVKLCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELN--QKGYDVKSDVWSLGITMIELATGRFPYDSWKTP 213 (283)
T ss_pred EECCCCCEEEeecccccccccccccccccCCccccChhhcCCccc--ccccCccccchhhHHHHHHHHhCCCCCCccccC
Confidence 999999999999999987644332233568899999998864321 2457789999999999999999999985321 1
Q ss_pred HHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhc
Q psy3880 157 MVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEG 236 (408)
Q Consensus 157 ~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~ 236 (408)
.+.+..+ ..+
T Consensus 214 ~~~~~~~----------------------------------------------------------------------~~~ 223 (283)
T cd06617 214 FQQLKQV----------------------------------------------------------------------VEE 223 (283)
T ss_pred HHHHHHH----------------------------------------------------------------------Hhc
Confidence 1111111 111
Q ss_pred -CCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q psy3880 237 -KYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPK 282 (408)
Q Consensus 237 -~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~ 282 (408)
...++. ..+|.++++||.+||..||++|||++++++||||...
T Consensus 224 ~~~~~~~---~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 267 (283)
T cd06617 224 PSPQLPA---EKFSPEFQDFVNKCLKKNYKERPNYPELLQHPFFELH 267 (283)
T ss_pred CCCCCCc---cccCHHHHHHHHHHccCChhhCcCHHHHhcCchhhhc
Confidence 001111 2368899999999999999999999999999999764
No 189
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=99.97 E-value=3e-30 Score=245.42 Aligned_cols=199 Identities=22% Similarity=0.444 Sum_probs=150.7
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC-----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEE
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN-----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENIL 78 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~-----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NIL 78 (408)
.+.|++++ .+.. +..+..++|+||+.||. |.+.+. +...++.++.|++.||.|||++|++||||+|+||+
T Consensus 64 ~l~h~~i~-~~~~~~~~~~~~~lv~e~~~~~~--L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil 140 (272)
T cd06629 64 DLDHLNIV-QYLGFETTEEYLSIFLEYVPGGS--IGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLL 140 (272)
T ss_pred hcCCCCcc-eEEEEeccCCceEEEEecCCCCc--HHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEE
Confidence 35788865 4443 55677899999999998 777653 34778899999999999999999999999999999
Q ss_pred EecCCCEEEeccccchhcccCc---ccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCch
Q psy3880 79 LDDQMNVKLTDFGFARVLKKGE---KLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRK 155 (408)
Q Consensus 79 l~~~~~iKl~DFGla~~~~~~~---~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~ 155 (408)
++.++.++++|||++....... ......|+..|+|||.+.... ..++.++|+||+|++++++++|..||...+
T Consensus 141 ~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~----~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~ 216 (272)
T cd06629 141 VDADGICKISDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYS----QGYSAKVDIWSLGCVVLEMFAGRRPWSDEE 216 (272)
T ss_pred EcCCCeEEEeeccccccccccccccccccccCCccccCHHHhcccc----CCCCccchhHHHHHHHHHHHhCCCCCcCcc
Confidence 9999999999999987654221 123456889999999986431 246788999999999999999999986543
Q ss_pred hHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHh
Q psy3880 156 QMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIME 235 (408)
Q Consensus 156 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~ 235 (408)
....+.++... .
T Consensus 217 ~~~~~~~~~~~--------------------------------------------------------------------~ 228 (272)
T cd06629 217 AIAAMFKLGNK--------------------------------------------------------------------R 228 (272)
T ss_pred hHHHHHHhhcc--------------------------------------------------------------------c
Confidence 32222111100 0
Q ss_pred cCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q psy3880 236 GKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFF 279 (408)
Q Consensus 236 ~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf 279 (408)
....++...+..++.++++||.+||..||++|||++++|+||||
T Consensus 229 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~ 272 (272)
T cd06629 229 SAPPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQHPFI 272 (272)
T ss_pred cCCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhCCCC
Confidence 00111222234578999999999999999999999999999997
No 190
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=99.97 E-value=8.3e-31 Score=253.81 Aligned_cols=202 Identities=27% Similarity=0.506 Sum_probs=152.1
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEE
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILL 79 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl 79 (408)
.+.|++++ .+.. +.++..|+|+||+.+|. |.+.+. +...+..++.|++.||+|||++||+||||||+||++
T Consensus 74 ~l~hp~i~-~~~~~~~~~~~~~iv~e~~~~~~--L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill 150 (297)
T cd06659 74 DYQHQNVV-EMYKSYLVGEELWVLMEFLQGGA--LTDIVSQTRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILL 150 (297)
T ss_pred hCCCCchh-hhhhheeeCCeEEEEEecCCCCC--HHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEE
Confidence 46798855 4443 34567799999999987 666543 457889999999999999999999999999999999
Q ss_pred ecCCCEEEeccccchhcccCc-ccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHH
Q psy3880 80 DDQMNVKLTDFGFARVLKKGE-KLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMV 158 (408)
Q Consensus 80 ~~~~~iKl~DFGla~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~ 158 (408)
+.++.+||+|||++....... .....+|++.|+|||++.. ..++.++|+||+||++|+|++|..||.......
T Consensus 151 ~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~ 224 (297)
T cd06659 151 TLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISR------TPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQ 224 (297)
T ss_pred ccCCcEEEeechhHhhcccccccccceecCccccCHHHHcc------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 999999999999987654322 2234678999999999864 245678888888888888888888875433222
Q ss_pred HHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCC
Q psy3880 159 MLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKY 238 (408)
Q Consensus 159 ~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~ 238 (408)
.+ ..+.....
T Consensus 225 ~~----------------------------------------------------------------------~~~~~~~~ 234 (297)
T cd06659 225 AM----------------------------------------------------------------------KRLRDSPP 234 (297)
T ss_pred HH----------------------------------------------------------------------HHHhccCC
Confidence 11 11111111
Q ss_pred CCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCCCCCCC
Q psy3880 239 SFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQD 287 (408)
Q Consensus 239 ~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~~~~~~ 287 (408)
. ....+..++.++.++|++||+.||++|||++++++||||.....+..
T Consensus 235 ~-~~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~~~~~~~~~~~~ 282 (297)
T cd06659 235 P-KLKNAHKISPVLRDFLERMLTREPQERATAQELLDHPFLLQTGLPEC 282 (297)
T ss_pred C-CccccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhChhhccCCCccc
Confidence 1 11123457889999999999999999999999999999986644433
No 191
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=99.97 E-value=3.2e-30 Score=246.47 Aligned_cols=220 Identities=26% Similarity=0.441 Sum_probs=157.3
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhh--------CCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCC
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDII--------NSNPALRYIMRQLFEALEHVHNHSVVHRDLKPE 75 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~--------~~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~ 75 (408)
.+.|+|+ +++.+ .+.+..++||||+.++ |.+.+ .+.+.+..++.|++.||+|||++||+||||||+
T Consensus 54 ~l~h~~i-~~~~~~~~~~~~~~lv~e~~~~~---l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ 129 (284)
T cd07836 54 ELKHENI-VRLHDVIHTENKLMLVFEYMDKD---LKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQ 129 (284)
T ss_pred hhcCCCE-eeeeeeEeeCCcEEEEEecCCcc---HHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHH
Confidence 4678874 46554 4456679999999864 44443 245788999999999999999999999999999
Q ss_pred cEEEecCCCEEEeccccchhcccCc-ccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCc
Q psy3880 76 NILLDDQMNVKLTDFGFARVLKKGE-KLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHR 154 (408)
Q Consensus 76 NILl~~~~~iKl~DFGla~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~ 154 (408)
||++++++.++|+|||++....... ......+++.|++||.+... ..++.++|+||+||++|++++|..||.+.
T Consensus 130 ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~-----~~~~~~~Dv~slG~~l~~l~~g~~~~~~~ 204 (284)
T cd07836 130 NLLINKRGELKLADFGLARAFGIPVNTFSNEVVTLWYRAPDVLLGS-----RTYSTSIDIWSVGCIMAEMITGRPLFPGT 204 (284)
T ss_pred HEEECCCCcEEEeecchhhhhcCCccccccccccccccChHHhcCC-----CCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 9999999999999999997654322 12335678899999988642 34678999999999999999999999988
Q ss_pred hhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHH
Q psy3880 155 KQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIM 234 (408)
Q Consensus 155 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~ 234 (408)
+..+...++...........|... . ....+....|.... .....+
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~------------------------------~-~~~~~~~~~~~~~~---~~~~~~- 249 (284)
T cd07836 205 NNEDQLLKIFRIMGTPTESTWPGI------------------------------S-QLPEYKPTFPRYPP---QDLQQL- 249 (284)
T ss_pred CcHHHHHHHHHHhCCCChhhHHHH------------------------------h-cCchhcccccCCCh---HHHHHH-
Confidence 877776666554322211111110 0 00000011111100 000111
Q ss_pred hcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q psy3880 235 EGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFF 279 (408)
Q Consensus 235 ~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf 279 (408)
...++.+++++|.+||+.||.+|||+.|+++||||
T Consensus 250 ----------~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~f 284 (284)
T cd07836 250 ----------FPHADPLGIDLLHRLLQLNPELRISAHDALQHPWF 284 (284)
T ss_pred ----------hhhcCcHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 12358899999999999999999999999999998
No 192
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=99.97 E-value=2.8e-30 Score=247.40 Aligned_cols=197 Identities=32% Similarity=0.514 Sum_probs=146.1
Q ss_pred ccCCcEEEEec-------cCCcHHHHHHHHHhhchhhHHhhh---------CCHHHHHHHHHHHHHHHHHHHHCCCeecc
Q psy3880 8 AHSRVVVRVKE-------EGDDLKHLAAQVVDKGEAAVQDII---------NSNPALRYIMRQLFEALEHVHNHSVVHRD 71 (408)
Q Consensus 8 ~~~~~i~~~~~-------~~~~~~~lv~e~~~~g~~~l~~~~---------~~~~~~r~i~~qil~aL~~LH~~~IvHRD 71 (408)
.|+|++ ++.. ..++..++||||+.||. |.+.+ .++..+..++.|++.||.|||+++|+|||
T Consensus 73 ~h~~i~-~~~~~~~~~~~~~~~~~~lv~e~~~~~~--L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~d 149 (286)
T cd06638 73 DHPNVV-KFYGMYYKKDVKNGDQLWLVLELCNGGS--VTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRD 149 (286)
T ss_pred cCCCee-eeeeeeeecccCCCCeEEEEEeecCCCC--HHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccC
Confidence 688755 5443 23456799999999998 66543 23467888999999999999999999999
Q ss_pred CCCCcEEEecCCCEEEeccccchhcccCc-ccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCC
Q psy3880 72 LKPENILLDDQMNVKLTDFGFARVLKKGE-KLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPP 150 (408)
Q Consensus 72 LKp~NILl~~~~~iKl~DFGla~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~p 150 (408)
|||+||+++.++.+||+|||++..+.... ......|++.|+|||++..... ....++.++|+||+||++|+|++|..|
T Consensus 150 lkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~~~~~~Dv~slGvi~~el~~g~~p 228 (286)
T cd06638 150 VKGNNILLTTEGGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQ-LDSTYDARCDVWSLGITAIELGDGDPP 228 (286)
T ss_pred CCHHhEEECCCCCEEEccCCceeecccCCCccccccCCCcccChhhhchhhh-ccccccchhhhhhHHHHHHHHhcCCCC
Confidence 99999999999999999999987654322 2233568999999999864211 124477889999999999999999998
Q ss_pred CCCchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHH
Q psy3880 151 FWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVML 230 (408)
Q Consensus 151 f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~ 230 (408)
|...+....+.++.. +.+|
T Consensus 229 ~~~~~~~~~~~~~~~---------------------------------------------------~~~~---------- 247 (286)
T cd06638 229 LADLHPMRALFKIPR---------------------------------------------------NPPP---------- 247 (286)
T ss_pred CCCCchhHHHhhccc---------------------------------------------------cCCC----------
Confidence 865433221111100 0000
Q ss_pred HHHHhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q psy3880 231 RNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFF 279 (408)
Q Consensus 231 ~~i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf 279 (408)
....+ ...+.++++||.+||..||++|||+.|+|+|+||
T Consensus 248 --------~~~~~--~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~~~ 286 (286)
T cd06638 248 --------TLHQP--ELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVFI 286 (286)
T ss_pred --------cccCC--CCcCHHHHHHHHHHccCCcccCCCHHHHhhcccC
Confidence 00000 1246789999999999999999999999999997
No 193
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.97 E-value=1.2e-30 Score=247.35 Aligned_cols=198 Identities=28% Similarity=0.462 Sum_probs=148.1
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC-----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEE
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN-----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENIL 78 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~-----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NIL 78 (408)
.+.|++++ .+.. ..++..|+||||+.+|. |.+.+. ++..+..++.|++.||+|||++||+||||||+||+
T Consensus 62 ~~~h~~ii-~~~~~~~~~~~~~iv~e~~~~~~--L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil 138 (267)
T cd06646 62 ECKHCNIV-AYFGSYLSREKLWICMEYCGGGS--LQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANIL 138 (267)
T ss_pred hcCCCCee-eeeEEEEeCCEEEEEEeCCCCCc--HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEE
Confidence 45788866 4443 44556789999999998 777653 45788999999999999999999999999999999
Q ss_pred EecCCCEEEeccccchhcccCc-ccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhH
Q psy3880 79 LDDQMNVKLTDFGFARVLKKGE-KLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 157 (408)
Q Consensus 79 l~~~~~iKl~DFGla~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~ 157 (408)
++.++.+||+|||++..+.... ......|++.|+|||.+... ....++.++|+||+||++|+|++|..||...+..
T Consensus 139 l~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~---~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~ 215 (267)
T cd06646 139 LTDNGDVKLADFGVAAKITATIAKRKSFIGTPYWMAPEVAAVE---KNGGYNQLCDIWAVGITAIELAELQPPMFDLHPM 215 (267)
T ss_pred ECCCCCEEECcCccceeecccccccCccccCccccCHhHcccc---cCCCCcchhhHHHHHHHHHHHHhCCCCccccchh
Confidence 9999999999999998664322 22345788999999987532 1234678999999999999999999998544322
Q ss_pred HHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcC
Q psy3880 158 VMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 237 (408)
Q Consensus 158 ~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~ 237 (408)
.....+....+ .+|.
T Consensus 216 ~~~~~~~~~~~-------------------------------------------------~~~~---------------- 230 (267)
T cd06646 216 RALFLMSKSNF-------------------------------------------------QPPK---------------- 230 (267)
T ss_pred hhheeeecCCC-------------------------------------------------CCCC----------------
Confidence 11111000000 0000
Q ss_pred CCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCC
Q psy3880 238 YSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSF 278 (408)
Q Consensus 238 ~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpw 278 (408)
+ ..-..+|.++++||++||..||++|||++++|+|+|
T Consensus 231 --~--~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l~ 267 (267)
T cd06646 231 --L--KDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHLF 267 (267)
T ss_pred --C--ccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCCC
Confidence 0 001235789999999999999999999999999998
No 194
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.97 E-value=1.1e-30 Score=252.71 Aligned_cols=197 Identities=28% Similarity=0.506 Sum_probs=151.1
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEE
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILL 79 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl 79 (408)
.+.|++++ .+.+ ..++..|+||||+.||. |.+++. +..++..++.|++.||.|||+.||+||||||+|||+
T Consensus 72 ~~~h~~i~-~~~~~~~~~~~~~lv~e~~~~~~--L~~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili 148 (297)
T cd06656 72 ENKNPNIV-NYLDSYLVGDELWVVMEYLAGGS--LTDVVTETCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILL 148 (297)
T ss_pred hCCCCCEe-eEEEEEecCCEEEEeecccCCCC--HHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE
Confidence 36788755 5443 45567899999999998 777653 347889999999999999999999999999999999
Q ss_pred ecCCCEEEeccccchhcccCcc-cccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHH
Q psy3880 80 DDQMNVKLTDFGFARVLKKGEK-LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMV 158 (408)
Q Consensus 80 ~~~~~iKl~DFGla~~~~~~~~-~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~ 158 (408)
+.++.++|+|||++........ .....+++.|+|||.+.. ..++.++|+||+||++|++++|..||.+.+...
T Consensus 149 ~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~ 222 (297)
T cd06656 149 GMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTR------KAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR 222 (297)
T ss_pred CCCCCEEECcCccceEccCCccCcCcccCCccccCHHHHcC------CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcch
Confidence 9999999999999876544322 234578899999999864 346788999999999999999999996543211
Q ss_pred HHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCC
Q psy3880 159 MLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKY 238 (408)
Q Consensus 159 ~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~ 238 (408)
.+..+. ..+.++.
T Consensus 223 ~~~~~~--------------------------------------------------~~~~~~~----------------- 235 (297)
T cd06656 223 ALYLIA--------------------------------------------------TNGTPEL----------------- 235 (297)
T ss_pred heeeec--------------------------------------------------cCCCCCC-----------------
Confidence 100000 0011110
Q ss_pred CCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q psy3880 239 SFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPK 282 (408)
Q Consensus 239 ~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~ 282 (408)
.....++..+++||.+||..||++|||++++|+||||...
T Consensus 236 ----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~ 275 (297)
T cd06656 236 ----QNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFLKLA 275 (297)
T ss_pred ----CCccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhccc
Confidence 0112467889999999999999999999999999999754
No 195
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=99.97 E-value=5e-30 Score=256.84 Aligned_cols=103 Identities=24% Similarity=0.459 Sum_probs=86.3
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEecCCCEEEeccccchhcccCccc---ccCCCCCcccChhhhhhccc
Q psy3880 46 PALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKL---MDLCGTPGYLAPEVLRANMF 122 (408)
Q Consensus 46 ~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl~~~~~iKl~DFGla~~~~~~~~~---~~~~gt~~y~aPE~l~~~~~ 122 (408)
+++..++.||+.||+|||++||+||||||+|||+++++.+||+|||+++.+...... ....+++.|+|||++..
T Consensus 212 ~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--- 288 (374)
T cd05106 212 DDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFD--- 288 (374)
T ss_pred HHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccCCCCccceeCHHHhcC---
Confidence 467889999999999999999999999999999999999999999999765433221 12234567999999864
Q ss_pred cCcCCCCcchhhhhhhHHHHHHHh-CCCCCCCc
Q psy3880 123 EDATGYGQAVDVWACGVIMYTLLV-GCPPFWHR 154 (408)
Q Consensus 123 ~~~~~~~~~~DiwSlGvil~~ll~-G~~pf~~~ 154 (408)
..++.++|+||+||++|+|++ |..||...
T Consensus 289 ---~~~~~~~DvwSlGvil~ellt~G~~Pf~~~ 318 (374)
T cd05106 289 ---CVYTVQSDVWSYGILLWEIFSLGKSPYPGI 318 (374)
T ss_pred ---CCCCccccHHHHHHHHHHHHhCCCCCCccc
Confidence 357889999999999999997 99999654
No 196
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=99.97 E-value=2.4e-30 Score=248.84 Aligned_cols=197 Identities=28% Similarity=0.434 Sum_probs=140.5
Q ss_pred ccCCcEEEEecc-------CCcHHHHHHHHHhhchhhHHhhhC---------CHHHHHHHHHHHHHHHHHHHHCCCeecc
Q psy3880 8 AHSRVVVRVKEE-------GDDLKHLAAQVVDKGEAAVQDIIN---------SNPALRYIMRQLFEALEHVHNHSVVHRD 71 (408)
Q Consensus 8 ~~~~~i~~~~~~-------~~~~~~lv~e~~~~g~~~l~~~~~---------~~~~~r~i~~qil~aL~~LH~~~IvHRD 71 (408)
.|+|++ .+... ..+..++|+||+.||. |.+.+. ++..++.++.|++.||+|||++||+|||
T Consensus 77 ~h~ni~-~~~~~~~~~~~~~~~~~~lv~ey~~~~s--L~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~d 153 (291)
T cd06639 77 NHPNVV-KFYGMFYKADKLVGGQLWLVLELCNGGS--VTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRD 153 (291)
T ss_pred CCCCeE-EEEEEEEeccccCCCeeEEEEEECCCCc--HHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccC
Confidence 688755 44431 1235789999999998 766542 4478899999999999999999999999
Q ss_pred CCCCcEEEecCCCEEEeccccchhcccCc-ccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCC
Q psy3880 72 LKPENILLDDQMNVKLTDFGFARVLKKGE-KLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPP 150 (408)
Q Consensus 72 LKp~NILl~~~~~iKl~DFGla~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~p 150 (408)
|||+||+++.++.+||+|||++....... ......|++.|+|||++..... ....++.++|+||+||++|+|++|.+|
T Consensus 154 lkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~~~~~~Di~slGvi~~el~~g~~p 232 (291)
T cd06639 154 VKGNNILLTTEGGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQ-YDYSYDARCDVWSLGITAIELGDGDPP 232 (291)
T ss_pred CCHHHEEEcCCCCEEEeecccchhcccccccccCccCCccccChhhhcCCCC-cccccCCccchHHHHHHHHHHhhCCCC
Confidence 99999999999999999999988654322 1223568899999998754210 012345667777777777777777666
Q ss_pred CCCchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHH
Q psy3880 151 FWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVML 230 (408)
Q Consensus 151 f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~ 230 (408)
|...+. ...+
T Consensus 233 ~~~~~~----------------------------------------------------------------------~~~~ 242 (291)
T cd06639 233 LFDMHP----------------------------------------------------------------------VKTL 242 (291)
T ss_pred CCCCcH----------------------------------------------------------------------HHHH
Confidence 643322 1222
Q ss_pred HHHHhcCC-CCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCC
Q psy3880 231 RNIMEGKY-SFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFH 280 (408)
Q Consensus 231 ~~i~~~~~-~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~ 280 (408)
..+..... .... -...+.++++||.+||..||++|||+.|+|+||||+
T Consensus 243 ~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~ 291 (291)
T cd06639 243 FKIPRNPPPTLLH--PEKWCRSFNHFISQCLIKDFEARPSVTHLLEHPFIK 291 (291)
T ss_pred HHHhcCCCCCCCc--ccccCHHHHHHHHHHhhcChhhCcCHHHHhcCcccC
Confidence 22222111 1111 123567899999999999999999999999999994
No 197
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.97 E-value=2.2e-30 Score=248.64 Aligned_cols=202 Identities=26% Similarity=0.395 Sum_probs=146.5
Q ss_pred ccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhh-------CCHHHHHHHHHHHHHHHHHHHHC-CCeeccCCCCcE
Q psy3880 8 AHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDII-------NSNPALRYIMRQLFEALEHVHNH-SVVHRDLKPENI 77 (408)
Q Consensus 8 ~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~-------~~~~~~r~i~~qil~aL~~LH~~-~IvHRDLKp~NI 77 (408)
.|+++| .+.. ..++..+++|||+.+....+...+ .++..+..++.|++.||+|||+. +|+||||||+||
T Consensus 61 ~~~~iv-~~~~~~~~~~~~~~~~e~~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Ni 139 (288)
T cd06616 61 DCPYIV-KFYGALFREGDCWICMELMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNI 139 (288)
T ss_pred CCCCEe-eeeeEEecCCcEEEEEecccCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHE
Confidence 477744 5543 334556788999876432343322 34578899999999999999974 999999999999
Q ss_pred EEecCCCEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchh-
Q psy3880 78 LLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQ- 156 (408)
Q Consensus 78 Ll~~~~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~- 156 (408)
+++.++.+||+|||++..+..........|++.|+|||++.... ...++.++|+||+||++|+|++|..||.....
T Consensus 140 l~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~---~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~ 216 (288)
T cd06616 140 LLDRNGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSA---RDGYDVRSDVWSLGITLYEVATGKFPYPKWNSV 216 (288)
T ss_pred EEccCCcEEEeecchhHHhccCCccccccCccCccCHHHhcccc---ccCCcchhhhhHHHHHHHHHHhCCCCchhcchH
Confidence 99999999999999998765443334457899999999986421 13577889999999999999999988854321
Q ss_pred HHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhc
Q psy3880 157 MVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEG 236 (408)
Q Consensus 157 ~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~ 236 (408)
.+.+.++. .+.+|
T Consensus 217 ~~~~~~~~---------------------------------------------------~~~~~---------------- 229 (288)
T cd06616 217 FDQLTQVV---------------------------------------------------KGDPP---------------- 229 (288)
T ss_pred HHHHhhhc---------------------------------------------------CCCCC----------------
Confidence 01111110 01111
Q ss_pred CCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q psy3880 237 KYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPK 282 (408)
Q Consensus 237 ~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~ 282 (408)
......+..+|.++.+||++||+.||++|||++|+++||||...
T Consensus 230 --~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~~~~~~~ 273 (288)
T cd06616 230 --ILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEHPFIKDY 273 (288)
T ss_pred --cCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhch
Confidence 11112234578999999999999999999999999999999763
No 198
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=99.97 E-value=2e-30 Score=246.26 Aligned_cols=193 Identities=30% Similarity=0.515 Sum_probs=145.2
Q ss_pred ccccCCcEEEEec----cCCcHHHHHHHHHhhchhhHHhhhC-----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCc
Q psy3880 6 MVAHSRVVVRVKE----EGDDLKHLAAQVVDKGEAAVQDIIN-----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPEN 76 (408)
Q Consensus 6 ~~~~~~~i~~~~~----~~~~~~~lv~e~~~~g~~~l~~~~~-----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~N 76 (408)
.+.|++++ .+.. ..++..++++||+.++. |.+.+. +...+..++.|++.||+|||+++|+||||||+|
T Consensus 60 ~l~h~~i~-~~~~~~~~~~~~~~~l~~e~~~~~~--L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~n 136 (266)
T cd06651 60 NLQHERIV-QYYGCLRDRAEKTLTIFMEYMPGGS--VKDQLKAYGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGAN 136 (266)
T ss_pred HcCCCCee-eEEEEEEcCCCCEEEEEEeCCCCCc--HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHH
Confidence 46788865 4443 22456789999999987 776653 457788899999999999999999999999999
Q ss_pred EEEecCCCEEEeccccchhcccC----cccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCC
Q psy3880 77 ILLDDQMNVKLTDFGFARVLKKG----EKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFW 152 (408)
Q Consensus 77 ILl~~~~~iKl~DFGla~~~~~~----~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~ 152 (408)
|+++.++.+||+|||++..+... .......++..|+|||.+.. ..++.++|+||+||++|++++|..||.
T Consensus 137 il~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~slG~i~~el~~g~~pf~ 210 (266)
T cd06651 137 ILRDSAGNVKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVISG------EGYGRKADVWSLGCTVVEMLTEKPPWA 210 (266)
T ss_pred EEECCCCCEEEccCCCccccccccccCCccccCCccccccCHHHhCC------CCCCchhhhHHHHHHHHHHHHCCCCcc
Confidence 99999999999999998765321 11223568889999999864 346789999999999999999999996
Q ss_pred CchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHH
Q psy3880 153 HRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRN 232 (408)
Q Consensus 153 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~ 232 (408)
.......+.++... +.
T Consensus 211 ~~~~~~~~~~~~~~--------------------------------------------------~~-------------- 226 (266)
T cd06651 211 EYEAMAAIFKIATQ--------------------------------------------------PT-------------- 226 (266)
T ss_pred ccchHHHHHHHhcC--------------------------------------------------CC--------------
Confidence 54332222211100 00
Q ss_pred HHhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCC
Q psy3880 233 IMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFH 280 (408)
Q Consensus 233 i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~ 280 (408)
...++ ..+++.+++|| +||..||++|||++|+++||||+
T Consensus 227 ----~~~~~----~~~~~~~~~li-~~~~~~p~~Rp~~~eil~hp~~~ 265 (266)
T cd06651 227 ----NPQLP----SHISEHARDFL-GCIFVEARHRPSAEELLRHPFAQ 265 (266)
T ss_pred ----CCCCc----hhcCHHHHHHH-HHhcCChhhCcCHHHHhcCcccc
Confidence 00010 23578889999 46668999999999999999996
No 199
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.97 E-value=9.4e-31 Score=257.89 Aligned_cols=225 Identities=29% Similarity=0.416 Sum_probs=155.0
Q ss_pred ccccCCcEEEEeccC-------CcHHHHHHHHHhhchhhHHhhhC-----CHHHHHHHHHHHHHHHHHHHHCCCeeccCC
Q psy3880 6 MVAHSRVVVRVKEEG-------DDLKHLAAQVVDKGEAAVQDIIN-----SNPALRYIMRQLFEALEHVHNHSVVHRDLK 73 (408)
Q Consensus 6 ~~~~~~~i~~~~~~~-------~~~~~lv~e~~~~g~~~l~~~~~-----~~~~~r~i~~qil~aL~~LH~~~IvHRDLK 73 (408)
.+.|+|++ .+.+.. ....|+|+||+.+ . |.+.+. ++..+..++.|++.||.|||+++++|||||
T Consensus 60 ~l~h~ni~-~~~~~~~~~~~~~~~~~~lv~e~~~~-~--L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlk 135 (337)
T cd07858 60 HLDHENVI-AIKDIMPPPHREAFNDVYIVYELMDT-D--LHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLK 135 (337)
T ss_pred hcCCCCcc-chHHheecccccccCcEEEEEeCCCC-C--HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCC
Confidence 46788754 544311 1236899999964 4 555542 457899999999999999999999999999
Q ss_pred CCcEEEecCCCEEEeccccchhcccC-cccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCC
Q psy3880 74 PENILLDDQMNVKLTDFGFARVLKKG-EKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFW 152 (408)
Q Consensus 74 p~NILl~~~~~iKl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~ 152 (408)
|+||+++.++.+||+|||++...... .......++..|+|||.+... ..++.++|+||+||++|+|++|.+||.
T Consensus 136 p~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-----~~~~~~~DiwslG~il~~l~~g~~pf~ 210 (337)
T cd07858 136 PSNLLLNANCDLKICDFGLARTTSEKGDFMTEYVVTRWYRAPELLLNC-----SEYTTAIDVWSVGCIFAELLGRKPLFP 210 (337)
T ss_pred HHHEEEcCCCCEEECcCccccccCCCcccccccccccCccChHHHhcC-----CCCCCcccHHHHHHHHHHHHcCCCCCC
Confidence 99999999999999999999866443 222345788999999988642 247789999999999999999999998
Q ss_pred CchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHH
Q psy3880 153 HRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRN 232 (408)
Q Consensus 153 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~ 232 (408)
+.+....+..+........ ++.+.. ..+. ........
T Consensus 211 ~~~~~~~~~~~~~~~~~~~------------~~~~~~-----------~~~~--------------------~~~~~~~~ 247 (337)
T cd07858 211 GKDYVHQLKLITELLGSPS------------EEDLGF-----------IRNE--------------------KARRYIRS 247 (337)
T ss_pred CCChHHHHHHHHHHhCCCC------------hHHhhh-----------cCch--------------------hhhHHHHh
Confidence 8765544444432211110 010000 0000 00000000
Q ss_pred HHhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q psy3880 233 IMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPK 282 (408)
Q Consensus 233 i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~ 282 (408)
+...........++.+|+++++||++||+.||++|||++|+|+||||...
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~ 297 (337)
T cd07858 248 LPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASL 297 (337)
T ss_pred cCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhh
Confidence 00000000001234689999999999999999999999999999999764
No 200
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.97 E-value=3.6e-30 Score=249.03 Aligned_cols=223 Identities=25% Similarity=0.404 Sum_probs=150.8
Q ss_pred ccccCCcEEEEecc----------CCcHHHHHHHHHhhchhhHHhhh------CCHHHHHHHHHHHHHHHHHHHHCCCee
Q psy3880 6 MVAHSRVVVRVKEE----------GDDLKHLAAQVVDKGEAAVQDII------NSNPALRYIMRQLFEALEHVHNHSVVH 69 (408)
Q Consensus 6 ~~~~~~~i~~~~~~----------~~~~~~lv~e~~~~g~~~l~~~~------~~~~~~r~i~~qil~aL~~LH~~~IvH 69 (408)
.+.|++++ ++.+. ..+..++||||+.++ +.+.+ .+.+++..++.||+.||+|||++|++|
T Consensus 67 ~l~h~~iv-~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~---l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H 142 (310)
T cd07865 67 LLKHENVV-NLIEICRTKATPYNRYKGSFYLVFEFCEHD---LAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKILH 142 (310)
T ss_pred hCCCCCcc-ceEEEEecccccccCCCceEEEEEcCCCcC---HHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 56788865 44431 123348999999764 44332 355889999999999999999999999
Q ss_pred ccCCCCcEEEecCCCEEEeccccchhcccCcc-----cccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHH
Q psy3880 70 RDLKPENILLDDQMNVKLTDFGFARVLKKGEK-----LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTL 144 (408)
Q Consensus 70 RDLKp~NILl~~~~~iKl~DFGla~~~~~~~~-----~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~l 144 (408)
+||||+||+++.++.+||+|||++..+..... .....++..|+|||.+.+. ..++.++|+||+|+++|+|
T Consensus 143 ~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-----~~~~~~~Di~slG~~l~el 217 (310)
T cd07865 143 RDMKAANILITKDGILKLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGE-----RDYGPPIDMWGAGCIMAEM 217 (310)
T ss_pred cCCCHHHEEECCCCcEEECcCCCcccccCCcccCCCCccCcccCccccCcHHhcCC-----cccCchhhhHHHHHHHHHH
Confidence 99999999999999999999999976543221 1234678899999988542 3467899999999999999
Q ss_pred HhCCCCCCCchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCc
Q psy3880 145 LVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHR 224 (408)
Q Consensus 145 l~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~ 224 (408)
++|..||.+.+.......+......+..+.+.... ..+.|.. ..+...
T Consensus 218 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~-----------~~~~~~ 265 (310)
T cd07865 218 WTRSPIMQGNTEQHQLTLISQLCGSITPEVWPGVD---------------------KLELFKK-----------MELPQG 265 (310)
T ss_pred HhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccc---------------------chhhhhh-----------ccCCCc
Confidence 99999998877655555444322111111111100 0011100 000000
Q ss_pred hhHHHHHHHHhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q psy3880 225 KQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFF 279 (408)
Q Consensus 225 ~~~~~~~~i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf 279 (408)
... .+. ... .....++.++|||.+||..||++|||++|+|+||||
T Consensus 266 -~~~---~~~-~~l-----~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h~~f 310 (310)
T cd07865 266 -QKR---KVK-ERL-----KPYVKDPHALDLIDKLLVLDPAKRIDADTALNHDFF 310 (310)
T ss_pred -cch---hhH-Hhc-----ccccCCHHHHHHHHHHhcCChhhccCHHHHhcCCCC
Confidence 000 000 000 001246789999999999999999999999999998
No 201
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=99.97 E-value=2.1e-30 Score=251.57 Aligned_cols=145 Identities=30% Similarity=0.406 Sum_probs=112.1
Q ss_pred ccccCCcEEEEec--cCC--cHHHHHHHHHhhchhhHHhh-------hCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCC
Q psy3880 6 MVAHSRVVVRVKE--EGD--DLKHLAAQVVDKGEAAVQDI-------INSNPALRYIMRQLFEALEHVHNHSVVHRDLKP 74 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~--~~~~lv~e~~~~g~~~l~~~-------~~~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp 74 (408)
.+.|++++ .+.+ ... +..++||||+.++...+... -.++..++.++.||+.||+|||+++|+||||||
T Consensus 58 ~l~h~~i~-~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp 136 (316)
T cd07842 58 ELKHENVV-SLVEVFLEHADKSVYLLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKP 136 (316)
T ss_pred hcCCCCcc-ceEEEEeCCCCceEEEEEeCCCcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCH
Confidence 46898865 4443 222 56789999997653222111 124578899999999999999999999999999
Q ss_pred CcEEEec----CCCEEEeccccchhcccCcc----cccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHh
Q psy3880 75 ENILLDD----QMNVKLTDFGFARVLKKGEK----LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV 146 (408)
Q Consensus 75 ~NILl~~----~~~iKl~DFGla~~~~~~~~----~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~ 146 (408)
+||+++. ++.+||+|||++........ ....++|+.|+|||++.+. ..++.++|+||+||++|+|++
T Consensus 137 ~Nil~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-----~~~~~~~Dv~slG~~l~~l~~ 211 (316)
T cd07842 137 ANILVMGEGPERGVVKIGDLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGA-----RHYTKAIDIWAIGCIFAELLT 211 (316)
T ss_pred HHEEEcCCCCccceEEECCCccccccCCCcccccccCCccccccccCHHHHhCC-----CCCCcHHHHHHHHHHHHHHHh
Confidence 9999998 89999999999886543221 2235788999999987642 356789999999999999999
Q ss_pred CCCCCCCchh
Q psy3880 147 GCPPFWHRKQ 156 (408)
Q Consensus 147 G~~pf~~~~~ 156 (408)
|.+||.+...
T Consensus 212 ~~~~~~~~~~ 221 (316)
T cd07842 212 LEPIFKGREA 221 (316)
T ss_pred cCCCCcCCcc
Confidence 9999976543
No 202
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.97 E-value=4.4e-30 Score=247.44 Aligned_cols=222 Identities=24% Similarity=0.410 Sum_probs=154.3
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC-------CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCc
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN-------SNPALRYIMRQLFEALEHVHNHSVVHRDLKPEN 76 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~-------~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~N 76 (408)
.+.|++++ .+.. ..++..|+||||+.++ +.+.+. +...++.++.||+.||+|||++||+||||||+|
T Consensus 57 ~l~h~~i~-~~~~~~~~~~~~~lv~e~~~~~---l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~n 132 (294)
T PLN00009 57 EMQHGNIV-RLQDVVHSEKRLYLVFEYLDLD---LKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQN 132 (294)
T ss_pred hccCCCEe-eEEEEEecCCeEEEEEeccccc---HHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcce
Confidence 46798855 4443 4456778999999653 544432 346788899999999999999999999999999
Q ss_pred EEEec-CCCEEEeccccchhcccCc-ccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCc
Q psy3880 77 ILLDD-QMNVKLTDFGFARVLKKGE-KLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHR 154 (408)
Q Consensus 77 ILl~~-~~~iKl~DFGla~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~ 154 (408)
|+++. ++.+||+|||++....... ......+++.|+|||.+.+. ..++.++|+||+||++|+|++|.+||.+.
T Consensus 133 ill~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~-----~~~~~~~Dv~slG~i~~~l~tg~~pf~~~ 207 (294)
T PLN00009 133 LLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGS-----RHYSTPVDIWSVGCIFAEMVNQKPLFPGD 207 (294)
T ss_pred EEEECCCCEEEEcccccccccCCCccccccCceeecccCHHHHhCC-----CCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 99985 4579999999997653321 22335678899999988542 34678999999999999999999999887
Q ss_pred hhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHH
Q psy3880 155 KQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIM 234 (408)
Q Consensus 155 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~ 234 (408)
+..+.+.++......... .+|.-..-+-......+.+....
T Consensus 208 ~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~~~~~~~~~~~~~--------- 248 (294)
T PLN00009 208 SEIDELFKIFRILGTPNE------------------------------ETWPGVTSLPDYKSAFPKWPPKD--------- 248 (294)
T ss_pred CHHHHHHHHHHHhCCCCh------------------------------hhccccccchhhhhhcccCCCCC---------
Confidence 776666655432211111 11110000000000000000000
Q ss_pred hcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCC
Q psy3880 235 EGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHP 281 (408)
Q Consensus 235 ~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~ 281 (408)
.......+|++++++|.+||..||++|||++++|+||||..
T Consensus 249 ------~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~~~~~ 289 (294)
T PLN00009 249 ------LATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYFKD 289 (294)
T ss_pred ------HHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcCchHhH
Confidence 00012357889999999999999999999999999999975
No 203
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=99.97 E-value=3.2e-30 Score=247.99 Aligned_cols=199 Identities=26% Similarity=0.509 Sum_probs=148.8
Q ss_pred ccccCCcEEEEec-cCCcHHHHHHHHHhhchhhHHhhhC----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEe
Q psy3880 6 MVAHSRVVVRVKE-EGDDLKHLAAQVVDKGEAAVQDIIN----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLD 80 (408)
Q Consensus 6 ~~~~~~~i~~~~~-~~~~~~~lv~e~~~~g~~~l~~~~~----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl~ 80 (408)
.+.|++++..+.. ...+..++|+||+.|+. |.+.+. +..++..++.|++.||+|||++||+||||||+||+++
T Consensus 72 ~~~h~~vv~~~~~~~~~~~~~~v~e~~~~~~--L~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~ 149 (285)
T cd06648 72 DYQHPNIVEMYSSYLVGDELWVVMEFLEGGA--LTDIVTHTRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLT 149 (285)
T ss_pred HcCCCChheEEEEEEcCCeEEEEEeccCCCC--HHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEc
Confidence 4678886644432 45567799999999998 777653 4478889999999999999999999999999999999
Q ss_pred cCCCEEEeccccchhcccCc-ccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHHH
Q psy3880 81 DQMNVKLTDFGFARVLKKGE-KLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVM 159 (408)
Q Consensus 81 ~~~~iKl~DFGla~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~~ 159 (408)
.++.++|+|||++....... ......|++.|+|||.+.. ..++.++|+||+||++|+|++|..||...+..
T Consensus 150 ~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~-- 221 (285)
T cd06648 150 SDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPEVISR------LPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPL-- 221 (285)
T ss_pred CCCcEEEcccccchhhccCCcccccccCCccccCHHHhcC------CCCCCcccHHHHHHHHHHHHhCCCCCcCCCHH--
Confidence 99999999999887554322 1223568999999998754 23567788888888888888887777543322
Q ss_pred HHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCCC
Q psy3880 160 LRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYS 239 (408)
Q Consensus 160 ~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~~ 239 (408)
.....+......
T Consensus 222 --------------------------------------------------------------------~~~~~~~~~~~~ 233 (285)
T cd06648 222 --------------------------------------------------------------------QAMKRIRDNLPP 233 (285)
T ss_pred --------------------------------------------------------------------HHHHHHHhcCCC
Confidence 122222222111
Q ss_pred CCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCCC
Q psy3880 240 FSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKL 283 (408)
Q Consensus 240 f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~~ 283 (408)
. ......++.++.+||++||..||++|||+.++++||||....
T Consensus 234 ~-~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~ 276 (285)
T cd06648 234 K-LKNLHKVSPRLRSFLDRMLVRDPAQRATAAELLNHPFLAKAG 276 (285)
T ss_pred C-CcccccCCHHHHHHHHHHcccChhhCcCHHHHccCcccccCC
Confidence 1 111124788999999999999999999999999999997643
No 204
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=99.97 E-value=2.9e-30 Score=242.67 Aligned_cols=193 Identities=29% Similarity=0.498 Sum_probs=149.4
Q ss_pred cccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC------CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEE
Q psy3880 7 VAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN------SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENIL 78 (408)
Q Consensus 7 ~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~------~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NIL 78 (408)
+.|++++ .+.+ ..+...|+++|++.++. |.+.+. +...++.++.|++.||.|||+.+|+|+||+|+||+
T Consensus 55 l~~~~i~-~~~~~~~~~~~~~l~~e~~~~~~--L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~ 131 (256)
T cd06612 55 CDSPYIV-KYYGSYFKNTDLWIVMEYCGAGS--VSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNIL 131 (256)
T ss_pred CCCCcEe-eeeeeeecCCcEEEEEecCCCCc--HHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEE
Confidence 4788755 5554 34466789999999998 777653 45788999999999999999999999999999999
Q ss_pred EecCCCEEEeccccchhcccCc-ccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhH
Q psy3880 79 LDDQMNVKLTDFGFARVLKKGE-KLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 157 (408)
Q Consensus 79 l~~~~~iKl~DFGla~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~ 157 (408)
++.++.++|+|||++....... ......++..|+|||++.+ ..++.++|+||+||++|+|++|..||......
T Consensus 132 ~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~------~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~ 205 (256)
T cd06612 132 LNEEGQAKLADFGVSGQLTDTMAKRNTVIGTPFWMAPEVIQE------IGYNNKADIWSLGITAIEMAEGKPPYSDIHPM 205 (256)
T ss_pred ECCCCcEEEcccccchhcccCccccccccCCccccCHHHHhc------CCCCchhhHHHHHHHHHHHHhCCCCCCCcchh
Confidence 9999999999999998765433 2233568899999999864 35678999999999999999999999654332
Q ss_pred HHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcC
Q psy3880 158 VMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 237 (408)
Q Consensus 158 ~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~ 237 (408)
.....+.. ..++
T Consensus 206 ~~~~~~~~---------------------------------------------------~~~~----------------- 217 (256)
T cd06612 206 RAIFMIPN---------------------------------------------------KPPP----------------- 217 (256)
T ss_pred hhhhhhcc---------------------------------------------------CCCC-----------------
Confidence 21111100 0000
Q ss_pred CCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q psy3880 238 YSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFF 279 (408)
Q Consensus 238 ~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf 279 (408)
.+. ....++.++.+||.+||+.||++|||+.|+|.||||
T Consensus 218 -~~~--~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~~~~ 256 (256)
T cd06612 218 -TLS--DPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQHPFI 256 (256)
T ss_pred -CCC--chhhcCHHHHHHHHHHHhcChhhCcCHHHHhcCCCC
Confidence 000 012357789999999999999999999999999997
No 205
>KOG4721|consensus
Probab=99.97 E-value=7.7e-31 Score=260.53 Aligned_cols=190 Identities=24% Similarity=0.463 Sum_probs=156.4
Q ss_pred cccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhCCH-----HHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEE
Q psy3880 7 VAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIINSN-----PALRYIMRQLFEALEHVHNHSVVHRDLKPENILL 79 (408)
Q Consensus 7 ~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~~~-----~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl 79 (408)
|.|+|+| .|.. +..-++.||||||..|- |+..+.+. ..+..+..+|+.|++|||.+.|||||||.-||||
T Consensus 169 LkH~NII-~FkGVCtqsPcyCIiMEfCa~Gq--L~~VLka~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLI 245 (904)
T KOG4721|consen 169 LKHPNII-TFKGVCTQSPCYCIIMEFCAQGQ--LYEVLKAGRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILI 245 (904)
T ss_pred ccCccee-eEeeeecCCceeEEeeecccccc--HHHHHhccCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEe
Confidence 7899865 7776 44456789999999999 99888654 5678889999999999999999999999999999
Q ss_pred ecCCCEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHHH
Q psy3880 80 DDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVM 159 (408)
Q Consensus 80 ~~~~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~~ 159 (408)
+.+..|||+|||-++.+........++||..|||||+|+. .+.+.|+|||||||++||||||..||.+-+.
T Consensus 246 s~~d~VKIsDFGTS~e~~~~STkMSFaGTVaWMAPEvIrn------ePcsEKVDIwSfGVVLWEmLT~EiPYkdVds--- 316 (904)
T KOG4721|consen 246 SYDDVVKISDFGTSKELSDKSTKMSFAGTVAWMAPEVIRN------EPCSEKVDIWSFGVVLWEMLTGEIPYKDVDS--- 316 (904)
T ss_pred eccceEEeccccchHhhhhhhhhhhhhhhHhhhCHHHhhc------CCcccccceehhHHHHHHHHhcCCCccccch---
Confidence 9999999999999998877666678999999999999985 4567899999999999999999999854321
Q ss_pred HHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCCC
Q psy3880 160 LRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYS 239 (408)
Q Consensus 160 ~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~~ 239 (408)
.+=||-.|-=. ..
T Consensus 317 -----------------------------------------sAIIwGVGsNs--------------------------L~ 329 (904)
T KOG4721|consen 317 -----------------------------------------SAIIWGVGSNS--------------------------LH 329 (904)
T ss_pred -----------------------------------------heeEEeccCCc--------------------------cc
Confidence 34455544210 01
Q ss_pred CCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCC
Q psy3880 240 FSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHS 277 (408)
Q Consensus 240 f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hp 277 (408)
. +.....++-++-||+.|+.-.|.+|||..++|.|-
T Consensus 330 L--pvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~Hl 365 (904)
T KOG4721|consen 330 L--PVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHL 365 (904)
T ss_pred c--cCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHH
Confidence 1 11134567788999999999999999999999994
No 206
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.97 E-value=3.9e-30 Score=252.86 Aligned_cols=225 Identities=28% Similarity=0.469 Sum_probs=160.4
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC-----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEE
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN-----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENIL 78 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~-----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NIL 78 (408)
.+.|++++ .+.+ ...+..++||||+.| . |.+.+. +.+.+..++.|++.||+|||++||+|+||||+||+
T Consensus 76 ~l~h~~iv-~~~~~~~~~~~~~lv~e~~~~-~--l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nil 151 (335)
T PTZ00024 76 EIKHENIM-GLVDVYVEGDFINLVMDIMAS-D--LKKVVDRKIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIF 151 (335)
T ss_pred hCCCccee-eeeEEEecCCcEEEEEecccc-C--HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeE
Confidence 46788755 4443 455677899999975 4 666553 45788999999999999999999999999999999
Q ss_pred EecCCCEEEeccccchhcccC---------------cccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHH
Q psy3880 79 LDDQMNVKLTDFGFARVLKKG---------------EKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYT 143 (408)
Q Consensus 79 l~~~~~iKl~DFGla~~~~~~---------------~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ 143 (408)
++.++.++|+|||++...... .......+++.|+|||.+.+. ..++.++|+||+||++|+
T Consensus 152 l~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-----~~~~~~~Dv~slG~~l~e 226 (335)
T PTZ00024 152 INSKGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGA-----EKYHFAVDMWSVGCIFAE 226 (335)
T ss_pred ECCCCCEEECCccceeecccccccccccccccccccccccccccccCCCCChhcccC-----CCCCcHHHHHHHHHHHHH
Confidence 999999999999998765411 111234568899999988542 346789999999999999
Q ss_pred HHhCCCCCCCchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCC
Q psy3880 144 LLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH 223 (408)
Q Consensus 144 ll~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~ 223 (408)
|++|.+||.+.+....+..+...........|.... .+....|+..
T Consensus 227 l~tg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~----------------------------------~~~~~~~~~~ 272 (335)
T PTZ00024 227 LLTGKPLFPGENEIDQLGRIFELLGTPNEDNWPQAK----------------------------------KLPLYTEFTP 272 (335)
T ss_pred HHhCCCCCCCCCHHHHHHHHHHHhCCCchhhCcchh----------------------------------hcccccccCc
Confidence 999999999888777766665432222111111100 0000011111
Q ss_pred chhHHHHHHHHhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCCCCC
Q psy3880 224 RKQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFD 285 (408)
Q Consensus 224 ~~~~~~~~~i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~~~~ 285 (408)
..... .. ......+.++.+||.+||..||++|||++|+|.||||+.....
T Consensus 273 ~~~~~-~~-----------~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~~~~~~~~ 322 (335)
T PTZ00024 273 RKPKD-LK-----------TIFPNASDDAIDLLQSLLKLNPLERISAKEALKHEYFKSDPLP 322 (335)
T ss_pred CCccc-HH-----------HhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCcccCCCCCC
Confidence 00000 00 0113468899999999999999999999999999999876544
No 207
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=99.97 E-value=1.8e-30 Score=246.16 Aligned_cols=197 Identities=31% Similarity=0.530 Sum_probs=147.8
Q ss_pred ccCCcEEEEecc--------CCcHHHHHHHHHhhchhhHHhhhC---------CHHHHHHHHHHHHHHHHHHHHCCCeec
Q psy3880 8 AHSRVVVRVKEE--------GDDLKHLAAQVVDKGEAAVQDIIN---------SNPALRYIMRQLFEALEHVHNHSVVHR 70 (408)
Q Consensus 8 ~~~~~i~~~~~~--------~~~~~~lv~e~~~~g~~~l~~~~~---------~~~~~r~i~~qil~aL~~LH~~~IvHR 70 (408)
.|+|++ .+.+. ..+..|+||||+.++. |.+.+. ++..++.++.|++.||.|||++|++|+
T Consensus 61 ~h~~i~-~~~~~~~~~~~~~~~~~~~lv~e~~~~~~--L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~ 137 (275)
T cd06608 61 NHPNIA-TFYGAFIKKNPPGNDDQLWLVMELCGGGS--VTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHR 137 (275)
T ss_pred CCCChh-eEEEEEEecCCCCcceEEEEEEEcCCCCc--HHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccC
Confidence 688755 44432 1334689999999987 655432 347889999999999999999999999
Q ss_pred cCCCCcEEEecCCCEEEeccccchhcccCc-ccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCC
Q psy3880 71 DLKPENILLDDQMNVKLTDFGFARVLKKGE-KLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCP 149 (408)
Q Consensus 71 DLKp~NILl~~~~~iKl~DFGla~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~ 149 (408)
||+|+||+++.++.+||+|||++....... ......|++.|+|||++...... ...++.++|+||+||++|+|++|..
T Consensus 138 ~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~~~~~~Dv~slG~il~~l~~g~~ 216 (275)
T cd06608 138 DIKGQNILLTKNAEVKLVDFGVSAQLDSTLGRRNTFIGTPYWMAPEVIACDEQP-DASYDARSDVWSLGITAIELADGKP 216 (275)
T ss_pred CCCHHHEEEccCCeEEECCCccceecccchhhhcCccccccccCHhHhcccccc-cCCccccccHHHhHHHHHHHHhCCC
Confidence 999999999999999999999987654322 22346789999999998643221 3457789999999999999999999
Q ss_pred CCCCchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHH
Q psy3880 150 PFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVM 229 (408)
Q Consensus 150 pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~ 229 (408)
||........+.++..+ .+|
T Consensus 217 p~~~~~~~~~~~~~~~~---------------------------------------------------~~~--------- 236 (275)
T cd06608 217 PLCDMHPMRALFKIPRN---------------------------------------------------PPP--------- 236 (275)
T ss_pred CccccchHHHHHHhhcc---------------------------------------------------CCC---------
Confidence 99654433332222211 000
Q ss_pred HHHHHhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q psy3880 230 LRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFF 279 (408)
Q Consensus 230 ~~~i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf 279 (408)
....+ ...+.++++||.+||..||++|||++|+++|||+
T Consensus 237 ---------~~~~~--~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~~~~ 275 (275)
T cd06608 237 ---------TLKSP--ENWSKKFNDFISECLIKNYEQRPFMEELLEHPFI 275 (275)
T ss_pred ---------CCCch--hhcCHHHHHHHHHHhhcChhhCcCHHHHhcCCCC
Confidence 00000 1257789999999999999999999999999996
No 208
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=99.96 E-value=4.6e-30 Score=241.77 Aligned_cols=192 Identities=25% Similarity=0.453 Sum_probs=151.9
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC-------CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCc
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN-------SNPALRYIMRQLFEALEHVHNHSVVHRDLKPEN 76 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~-------~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~N 76 (408)
.+.|++++ .+.+ .+.+..+++|||+.+|. |.+.+. +...+..++.|++.||.|||+.|++|+||||+|
T Consensus 55 ~~~h~~i~-~~~~~~~~~~~~~~~~e~~~~~~--L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~n 131 (256)
T cd08221 55 LLQHPNII-AYYNHFMDDNTLLIEMEYANGGT--LYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLN 131 (256)
T ss_pred hCCCCCee-EEEeEEecCCeEEEEEEecCCCc--HHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHh
Confidence 35688744 5543 44567789999999998 777663 346888999999999999999999999999999
Q ss_pred EEEecCCCEEEeccccchhcccCc-ccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCch
Q psy3880 77 ILLDDQMNVKLTDFGFARVLKKGE-KLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRK 155 (408)
Q Consensus 77 ILl~~~~~iKl~DFGla~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~ 155 (408)
|+++.++.+||+|||++....... ......|++.|+|||.+.+ ..++.++|+||+||++|+|++|..||...+
T Consensus 132 i~~~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~------~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~ 205 (256)
T cd08221 132 IFLTKAGLIKLGDFGISKILGSEYSMAETVVGTPYYMSPELCQG------VKYNFKSDIWALGCVLYELLTLKRTFDATN 205 (256)
T ss_pred EEEeCCCCEEECcCcceEEcccccccccccCCCccccCHhhcCC------CCCCCcchhHHHHHHHHHHHHCCCCCCCCC
Confidence 999999999999999987664433 2334678999999998864 245678999999999999999999987655
Q ss_pred hHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHh
Q psy3880 156 QMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIME 235 (408)
Q Consensus 156 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~ 235 (408)
..+....+..+.
T Consensus 206 ~~~~~~~~~~~~-------------------------------------------------------------------- 217 (256)
T cd08221 206 PLNLVVKIVQGN-------------------------------------------------------------------- 217 (256)
T ss_pred HHHHHHHHHcCC--------------------------------------------------------------------
Confidence 444444333221
Q ss_pred cCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q psy3880 236 GKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFF 279 (408)
Q Consensus 236 ~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf 279 (408)
+... -..++.+++++|.+||..||.+|||++|+|+|||+
T Consensus 218 --~~~~---~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~~l 256 (256)
T cd08221 218 --YTPV---VSVYSSELISLVHSLLQQDPEKRPTADEVLDQPLL 256 (256)
T ss_pred --CCCC---ccccCHHHHHHHHHHcccCcccCCCHHHHhhCcCC
Confidence 1110 03467889999999999999999999999999996
No 209
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=99.96 E-value=2.7e-30 Score=242.82 Aligned_cols=192 Identities=28% Similarity=0.511 Sum_probs=149.3
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC-------CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCc
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN-------SNPALRYIMRQLFEALEHVHNHSVVHRDLKPEN 76 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~-------~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~N 76 (408)
.+.|++++ .+.+ ..++..++|+||+.||. |.+.+. ++..+..++.|++.||+|||++||+|+||||+|
T Consensus 55 ~~~~~~i~-~~~~~~~~~~~~~lv~e~~~~~~--L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~n 131 (256)
T cd08220 55 LLSHPNII-EYYENFLEDKALMIVMEYAPGGT--LAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQN 131 (256)
T ss_pred hCCCCchh-heeeeEecCCEEEEEEecCCCCC--HHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHH
Confidence 45788755 4443 44566799999999998 777653 347888999999999999999999999999999
Q ss_pred EEEecCC-CEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCch
Q psy3880 77 ILLDDQM-NVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRK 155 (408)
Q Consensus 77 ILl~~~~-~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~ 155 (408)
|+++.++ .+||+|||++.............|++.|+|||.+.. ..++.++|+||+|+++|+|++|..||...+
T Consensus 132 il~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~ 205 (256)
T cd08220 132 ILLDKHKMVVKIGDFGISKILSSKSKAYTVVGTPCYISPELCEG------KPYNQKSDIWALGCVLYELASLKRAFEAAN 205 (256)
T ss_pred EEEcCCCCEEEEccCCCceecCCCccccccccCCcccCchhccC------CCCCcccchHHHHHHHHHHHhCCCCcccCc
Confidence 9998554 589999999987665444445678999999998864 346778999999999999999999886554
Q ss_pred hHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHh
Q psy3880 156 QMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIME 235 (408)
Q Consensus 156 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~ 235 (408)
.......+..
T Consensus 206 ~~~~~~~~~~---------------------------------------------------------------------- 215 (256)
T cd08220 206 LPALVLKIMS---------------------------------------------------------------------- 215 (256)
T ss_pred hHHHHHHHHh----------------------------------------------------------------------
Confidence 3333222221
Q ss_pred cCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q psy3880 236 GKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFF 279 (408)
Q Consensus 236 ~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf 279 (408)
+... +....++.++++||.+||..||++|||+.|+|+||||
T Consensus 216 ~~~~---~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~p~~ 256 (256)
T cd08220 216 GTFA---PISDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQPIC 256 (256)
T ss_pred cCCC---CCCCCcCHHHHHHHHHHccCChhhCCCHHHHhhCCCC
Confidence 1100 0112468899999999999999999999999999997
No 210
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.96 E-value=8.1e-31 Score=280.69 Aligned_cols=126 Identities=25% Similarity=0.400 Sum_probs=97.3
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC-----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEE
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN-----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENIL 78 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~-----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NIL 78 (408)
.+.|+++| .+.. ...+..|+||||+.||. |.+++. .+..++.++.||+.||+|||++|||||||||+|||
T Consensus 60 ~l~hp~Iv-~~~~~~~~~~~~~lVmEy~~g~~--L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NIL 136 (669)
T cd05610 60 LSKSPFIV-HLYYSLQSANNVYLVMEYLIGGD--VKSLLHIYGYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNML 136 (669)
T ss_pred hcCCCCcC-eEEEEEEECCEEEEEEeCCCCCC--HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEE
Confidence 35788765 4443 44567899999999998 877764 45788999999999999999999999999999999
Q ss_pred EecCCCEEEeccccchhcccCc-ccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhH
Q psy3880 79 LDDQMNVKLTDFGFARVLKKGE-KLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGV 139 (408)
Q Consensus 79 l~~~~~iKl~DFGla~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGv 139 (408)
++.++.+||+|||+++...... ......+|+.|++||..... .+-...+++|++|+
T Consensus 137 l~~~g~vkL~DFGls~~~~~~~~~~~~~~~t~~~~~pe~~~~~-----~~~~~~s~~~s~g~ 193 (669)
T cd05610 137 ISNEGHIKLTDFGLSKVTLNRELNMMDILTTPSMAKPKNDYSR-----TPGQVLSLISSLGF 193 (669)
T ss_pred EcCCCCEEEEeCCCCccccCCcccccccccCccccCccccccC-----CCCceeeeeeecCc
Confidence 9999999999999998765432 33457899999999865321 11233455666653
No 211
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.96 E-value=1.4e-30 Score=252.00 Aligned_cols=220 Identities=25% Similarity=0.433 Sum_probs=152.8
Q ss_pred ccccCCcEEEEecc----------CCcHHHHHHHHHhhchhhHHhhh------CCHHHHHHHHHHHHHHHHHHHHCCCee
Q psy3880 6 MVAHSRVVVRVKEE----------GDDLKHLAAQVVDKGEAAVQDII------NSNPALRYIMRQLFEALEHVHNHSVVH 69 (408)
Q Consensus 6 ~~~~~~~i~~~~~~----------~~~~~~lv~e~~~~g~~~l~~~~------~~~~~~r~i~~qil~aL~~LH~~~IvH 69 (408)
.+.|++++ ++.+. .....++|+||+.+. +...+ .+..+++.++.||++||+|||++||+|
T Consensus 63 ~l~h~~i~-~~~~~~~~~~~~~~~~~~~~~lv~~~~~~~---l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H 138 (311)
T cd07866 63 KLKHPNVV-PLIDMAVERPDKSKRKRGSVYMVTPYMDHD---LSGLLENPSVKLTESQIKCYMLQLLEGINYLHENHILH 138 (311)
T ss_pred hcCCCCcc-chhhheecccccccccCceEEEEEecCCcC---HHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 46788755 54431 122458899998764 33332 345889999999999999999999999
Q ss_pred ccCCCCcEEEecCCCEEEeccccchhcccCcc------------cccCCCCCcccChhhhhhccccCcCCCCcchhhhhh
Q psy3880 70 RDLKPENILLDDQMNVKLTDFGFARVLKKGEK------------LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWAC 137 (408)
Q Consensus 70 RDLKp~NILl~~~~~iKl~DFGla~~~~~~~~------------~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSl 137 (408)
|||||+||++++++.+||+|||++........ .....+++.|+|||.+.+. ..++.++|+||+
T Consensus 139 ~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-----~~~~~~~Dv~sl 213 (311)
T cd07866 139 RDIKAANILIDNQGILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGE-----RRYTTAVDIWGI 213 (311)
T ss_pred CCCCHHHEEECCCCCEEECcCccchhccCCCcccccCCcccccccccceeccCcCChHHhhCC-----CccCchhHhHHH
Confidence 99999999999999999999999976543211 1223568889999987642 346789999999
Q ss_pred hHHHHHHHhCCCCCCCchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcC
Q psy3880 138 GVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVG 217 (408)
Q Consensus 138 Gvil~~ll~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g 217 (408)
||++|+|++|++||.+.+.......+.........+.+.... .+..
T Consensus 214 G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------~~~~ 259 (311)
T cd07866 214 GCVFAEMFTRRPILQGKSDIDQLHLIFKLCGTPTEETWPGWR----------------------------------SLPG 259 (311)
T ss_pred HHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhchhhh----------------------------------hccc
Confidence 999999999999999888777666665432222211111100 0000
Q ss_pred CCC-CCCchhHHHHHHHHhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q psy3880 218 CPP-FWHRKQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFF 279 (408)
Q Consensus 218 ~~P-f~~~~~~~~~~~i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf 279 (408)
... .........+ ...+...++++.+||.+||..||.+|||+.|+++||||
T Consensus 260 ~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~~~f 311 (311)
T cd07866 260 CEGVHSFTNYPRTL-----------EERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEHPYF 311 (311)
T ss_pred ccccccCCCCCccH-----------HHHcccCChhHHHHHHHHcccCcccCcCHHHHhcCCCC
Confidence 000 0000000000 01123467889999999999999999999999999998
No 212
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=99.96 E-value=4.5e-30 Score=241.79 Aligned_cols=192 Identities=30% Similarity=0.491 Sum_probs=150.7
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC-------CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCc
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN-------SNPALRYIMRQLFEALEHVHNHSVVHRDLKPEN 76 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~-------~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~N 76 (408)
.+.|++++ .+.+ +..+..++|+||+.+|. |.+.+. ++.++..++.|++.||.|||++|++|+||+|+|
T Consensus 55 ~l~~~~i~-~~~~~~~~~~~~~lv~e~~~~~~--l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~n 131 (256)
T cd08218 55 NMKHPNIV-QYQESFEENGNLYIVMDYCEGGD--LYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQN 131 (256)
T ss_pred hCCCCCee-eeEeeecCCCeEEEEEecCCCCc--HHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHH
Confidence 46788755 5554 45567789999999998 776653 346788899999999999999999999999999
Q ss_pred EEEecCCCEEEeccccchhcccCcc-cccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCch
Q psy3880 77 ILLDDQMNVKLTDFGFARVLKKGEK-LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRK 155 (408)
Q Consensus 77 ILl~~~~~iKl~DFGla~~~~~~~~-~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~ 155 (408)
|+++.++.++|+|||++........ .....|++.|+|||++.. ..++.++|+||+||+++++++|..||...+
T Consensus 132 il~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~------~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~ 205 (256)
T cd08218 132 IFLTKDGTIKLGDFGIARVLNSTVELARTCIGTPYYLSPEICEN------RPYNNKSDIWALGCVLYEMCTLKHAFEAGN 205 (256)
T ss_pred EEEcCCCCEEEeeccceeecCcchhhhhhccCCccccCHHHhCC------CCCCCccchhHHHHHHHHHHcCCCCccCCC
Confidence 9999999999999999876544322 223568889999999864 345678999999999999999999986554
Q ss_pred hHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHh
Q psy3880 156 QMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIME 235 (408)
Q Consensus 156 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~ 235 (408)
......++..+
T Consensus 206 ~~~~~~~~~~~--------------------------------------------------------------------- 216 (256)
T cd08218 206 MKNLVLKIIRG--------------------------------------------------------------------- 216 (256)
T ss_pred HHHHHHHHhcC---------------------------------------------------------------------
Confidence 44333333221
Q ss_pred cCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q psy3880 236 GKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFF 279 (408)
Q Consensus 236 ~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf 279 (408)
.... .-...+.+++++|.+||..||++|||+.|+|+||||
T Consensus 217 -~~~~---~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~~~~ 256 (256)
T cd08218 217 -SYPP---VSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEKNFI 256 (256)
T ss_pred -CCCC---CcccCCHHHHHHHHHHhhCChhhCcCHHHHhhCcCC
Confidence 1100 012457889999999999999999999999999998
No 213
>KOG0574|consensus
Probab=99.96 E-value=1.4e-31 Score=248.67 Aligned_cols=195 Identities=29% Similarity=0.524 Sum_probs=154.6
Q ss_pred cCCcEEEEeccC--CcHHHHHHHHHhhchhhHHhhhC------CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEe
Q psy3880 9 HSRVVVRVKEEG--DDLKHLAAQVVDKGEAAVQDIIN------SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLD 80 (408)
Q Consensus 9 ~~~~i~~~~~~~--~~~~~lv~e~~~~g~~~l~~~~~------~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl~ 80 (408)
.+.+||.++... ....++|||||-.|. +.|++. ++.++..+++..|.||+|||...-||||||..|||++
T Consensus 86 ~S~yVVKYYGSYFK~sDLWIVMEYCGAGS--iSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLN 163 (502)
T KOG0574|consen 86 KSKYVVKYYGSYFKHSDLWIVMEYCGAGS--ISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLN 163 (502)
T ss_pred CCchhhhhhhhhccCCceEeehhhcCCCc--HHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEc
Confidence 355677766432 345689999998888 888763 4589999999999999999999999999999999999
Q ss_pred cCCCEEEeccccchhcccCcc-cccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHHH
Q psy3880 81 DQMNVKLTDFGFARVLKKGEK-LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVM 159 (408)
Q Consensus 81 ~~~~iKl~DFGla~~~~~~~~-~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~~ 159 (408)
.+|..||+|||+|..+.+... -.+..|||.|||||++.. -+|++++||||||++..||..|++||.+-.....
T Consensus 164 T~G~AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI~E------IGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRA 237 (502)
T KOG0574|consen 164 TDGIAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIEE------IGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRA 237 (502)
T ss_pred ccchhhhhhccccchhhhhHHhhCccccCcccccHHHHHH------hccchhhhHhhhcchhhhhhcCCCCcccccccce
Confidence 999999999999988875432 346889999999999975 5799999999999999999999999854322110
Q ss_pred HHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCCC
Q psy3880 160 LRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYS 239 (408)
Q Consensus 160 ~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~~ 239 (408)
+ | |+-..||- .
T Consensus 238 I---------------------------------------------------F-MIPT~PPP-----------------T 248 (502)
T KOG0574|consen 238 I---------------------------------------------------F-MIPTKPPP-----------------T 248 (502)
T ss_pred e---------------------------------------------------E-eccCCCCC-----------------C
Confidence 0 0 11112221 2
Q ss_pred CCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q psy3880 240 FSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPK 282 (408)
Q Consensus 240 f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~ 282 (408)
|..|+ ..|.+..|||++||+++|++|-||-++++|||+...
T Consensus 249 F~KPE--~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H~FiknA 289 (502)
T KOG0574|consen 249 FKKPE--EWSSEFNDFIRSCLIKKPEERKTALRLCEHTFIKNA 289 (502)
T ss_pred CCChH--hhhhHHHHHHHHHhcCCHHHHHHHHHHhhhhhhcCC
Confidence 32221 237899999999999999999999999999999753
No 214
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=99.96 E-value=6.5e-30 Score=240.66 Aligned_cols=192 Identities=32% Similarity=0.569 Sum_probs=150.5
Q ss_pred ccccCCcEEEEec----cCCcHHHHHHHHHhhchhhHHhhhC---------CHHHHHHHHHHHHHHHHHHH-----HCCC
Q psy3880 6 MVAHSRVVVRVKE----EGDDLKHLAAQVVDKGEAAVQDIIN---------SNPALRYIMRQLFEALEHVH-----NHSV 67 (408)
Q Consensus 6 ~~~~~~~i~~~~~----~~~~~~~lv~e~~~~g~~~l~~~~~---------~~~~~r~i~~qil~aL~~LH-----~~~I 67 (408)
.+.|++++ .+.+ ......|+++||+.+|. |.+.+. +..++..++.||+.||.||| +.+|
T Consensus 55 ~l~~~~i~-~~~~~~~~~~~~~~~~~~e~~~~~~--L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i 131 (265)
T cd08217 55 ELKHPNIV-RYYDRIIDRSNQTLYIVMEYCEGGD--LAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTV 131 (265)
T ss_pred hcCCCccc-eeeeeeecCCCCEEEEEehhccCCC--HHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcc
Confidence 35788755 4433 23445689999999998 766653 33688999999999999999 9999
Q ss_pred eeccCCCCcEEEecCCCEEEeccccchhcccCcc-cccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHh
Q psy3880 68 VHRDLKPENILLDDQMNVKLTDFGFARVLKKGEK-LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV 146 (408)
Q Consensus 68 vHRDLKp~NILl~~~~~iKl~DFGla~~~~~~~~-~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~ 146 (408)
+|+||||+||+++.++.+||+|||++........ .....+++.|+|||.+.. ..++.++|+||+|+++++|++
T Consensus 132 ~h~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~pE~~~~------~~~~~~~Dv~slG~il~~l~~ 205 (265)
T cd08217 132 LHRDLKPANIFLDANNNVKLGDFGLAKILGHDSSFAKTYVGTPYYMSPEQLNH------MSYDEKSDIWSLGCLIYELCA 205 (265)
T ss_pred eecCCCHHHEEEecCCCEEEecccccccccCCcccccccccCCCccChhhhcC------CCCCchhHHHHHHHHHHHHHH
Confidence 9999999999999999999999999987765433 334678999999999864 346788999999999999999
Q ss_pred CCCCCCCchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchh
Q psy3880 147 GCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQ 226 (408)
Q Consensus 147 G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~ 226 (408)
|+.||...+.......+..+
T Consensus 206 g~~p~~~~~~~~~~~~~~~~------------------------------------------------------------ 225 (265)
T cd08217 206 LSPPFTARNQLQLASKIKEG------------------------------------------------------------ 225 (265)
T ss_pred CCCcccCcCHHHHHHHHhcC------------------------------------------------------------
Confidence 99999766544333333221
Q ss_pred HHHHHHHHhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q psy3880 227 MVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFF 279 (408)
Q Consensus 227 ~~~~~~i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf 279 (408)
.+... -...+.++.+|+.+||..||++|||++++|+|||+
T Consensus 226 ----------~~~~~---~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~~~~ 265 (265)
T cd08217 226 ----------KFRRI---PYRYSSELNEVIKSMLNVDPDKRPSTEELLQLPLI 265 (265)
T ss_pred ----------CCCCC---ccccCHHHHHHHHHHccCCcccCCCHHHHhhCCCC
Confidence 11000 01357889999999999999999999999999995
No 215
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.96 E-value=1.1e-30 Score=244.44 Aligned_cols=183 Identities=26% Similarity=0.408 Sum_probs=141.3
Q ss_pred ccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC-----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEe
Q psy3880 8 AHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN-----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLD 80 (408)
Q Consensus 8 ~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~-----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl~ 80 (408)
.|+| |+.+.+ ...+..++||||+.||. |.+.+. +.+.+..++.|++.||+|||++||+||||||+||+++
T Consensus 43 ~~~~-i~~~~~~~~~~~~~~lv~e~~~~~~--L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~ 119 (237)
T cd05576 43 CVPN-MVCLHKYIVSEDSVFLVLQHAEGGK--LWSHISKFLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLD 119 (237)
T ss_pred CCCc-eeehhhheecCCeEEEEEecCCCCC--HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEc
Confidence 4676 446665 34466789999999998 877763 4578899999999999999999999999999999999
Q ss_pred cCCCEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHHHH
Q psy3880 81 DQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVML 160 (408)
Q Consensus 81 ~~~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~~~ 160 (408)
.++.++++|||++..+... .....+++.|+|||.+.. ..++.++|+||+||++|+|++|..||......
T Consensus 120 ~~~~~~l~df~~~~~~~~~--~~~~~~~~~y~aPE~~~~------~~~~~~~DvwslG~il~el~~g~~~~~~~~~~--- 188 (237)
T cd05576 120 DRGHIQLTYFSRWSEVEDS--CDGEAVENMYCAPEVGGI------SEETEACDWWSLGAILFELLTGKTLVECHPSG--- 188 (237)
T ss_pred CCCCEEEecccchhccccc--cccCCcCccccCCcccCC------CCCCchhhHHHHHHHHHHHHHCcchhhcCchh---
Confidence 9999999999988665432 234556778999998753 34677899999999999999998776321100
Q ss_pred HHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCCCC
Q psy3880 161 RNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240 (408)
Q Consensus 161 ~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~~f 240 (408)
+ .....+
T Consensus 189 ------------------------------------------------------------------------~-~~~~~~ 195 (237)
T cd05576 189 ------------------------------------------------------------------------I-NTHTTL 195 (237)
T ss_pred ------------------------------------------------------------------------c-cccccc
Confidence 0 000000
Q ss_pred CCCcCCCCCccHHHHHHHhcccCCCCCCCH-----HHHHcCCCC
Q psy3880 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSV-----KEALNHSFF 279 (408)
Q Consensus 241 ~~~~~~~iS~~~~dLI~klL~~dP~~R~ta-----~e~L~Hpwf 279 (408)
..+ ..+++++++||++||+.||++|+|+ +|+++||||
T Consensus 196 ~~~--~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h~~~ 237 (237)
T cd05576 196 NIP--EWVSEEARSLLQQLLQFNPTERLGAGVAGVEDIKSHPFF 237 (237)
T ss_pred CCc--ccCCHHHHHHHHHHccCCHHHhcCCCccchHHHHcCCCC
Confidence 111 2368899999999999999999985 999999998
No 216
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=99.96 E-value=3.8e-30 Score=244.34 Aligned_cols=196 Identities=23% Similarity=0.483 Sum_probs=145.2
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC--------CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCC
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN--------SNPALRYIMRQLFEALEHVHNHSVVHRDLKPE 75 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~--------~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~ 75 (408)
.+.|+|++ .+.. ..++..++|+||+.++. |.+.+. ....+..++.||+.||+|||++||+||||||+
T Consensus 61 ~l~h~~iv-~~~~~~~~~~~~~lv~e~~~~~~--L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~ 137 (268)
T cd06624 61 YLKHRNIV-QYLGSDSENGFFKIFMEQVPGGS--LSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGD 137 (268)
T ss_pred hcCCCCee-eeeeeeccCCEEEEEEecCCCCC--HHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHH
Confidence 35788855 5543 44567889999999998 776653 34677889999999999999999999999999
Q ss_pred cEEEec-CCCEEEeccccchhcccCc-ccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCC
Q psy3880 76 NILLDD-QMNVKLTDFGFARVLKKGE-KLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH 153 (408)
Q Consensus 76 NILl~~-~~~iKl~DFGla~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~ 153 (408)
||+++. ++.++|+|||++....... ......|++.|+|||++... ...++.++|+||+||++|+|++|..||..
T Consensus 138 nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~----~~~~~~~~Dv~slGvvl~~l~~g~~p~~~ 213 (268)
T cd06624 138 NVLVNTYSGVVKISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDKG----PRGYGAPADIWSLGCTIVEMATGKPPFIE 213 (268)
T ss_pred HEEEcCCCCeEEEecchhheecccCCCccccCCCCccccChhhhccc----cccCCchhhhHHHHHHHHHHHhCCCCCcc
Confidence 999976 6789999999987654322 22335688999999998542 23467889999999999999999988843
Q ss_pred chhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHH
Q psy3880 154 RKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI 233 (408)
Q Consensus 154 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i 233 (408)
..... ..+|.. ..
T Consensus 214 ~~~~~-------------------------------------------~~~~~~------------------------~~ 226 (268)
T cd06624 214 LGEPQ-------------------------------------------AAMFKV------------------------GM 226 (268)
T ss_pred ccChh-------------------------------------------hhHhhh------------------------hh
Confidence 21100 000000 00
Q ss_pred HhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q psy3880 234 MEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFF 279 (408)
Q Consensus 234 ~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf 279 (408)
. .........+++++++||++||..||++|||+.|++.||||
T Consensus 227 ~----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 268 (268)
T cd06624 227 F----KIHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQDPFL 268 (268)
T ss_pred h----ccCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhCCCC
Confidence 0 00001123568899999999999999999999999999997
No 217
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=99.96 E-value=2.7e-30 Score=247.30 Aligned_cols=223 Identities=30% Similarity=0.466 Sum_probs=157.3
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhh-----CCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEE
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDII-----NSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENIL 78 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~-----~~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NIL 78 (408)
.+.|++++ .+.+ +.++..|+|+||+.++. +.+.. .+..++..++.||+.||.|||++||+|+||+|+||+
T Consensus 56 ~l~h~~i~-~~~~~~~~~~~~~lv~e~~~~~~--l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~ 132 (286)
T cd07846 56 QLRHENLV-NLIEVFRRKKRLYLVFEFVDHTV--LDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENIL 132 (286)
T ss_pred hcCCcchh-hHHHhcccCCeEEEEEecCCccH--HHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEE
Confidence 46788755 5544 45566799999999886 54443 245889999999999999999999999999999999
Q ss_pred EecCCCEEEeccccchhcccCc-ccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhH
Q psy3880 79 LDDQMNVKLTDFGFARVLKKGE-KLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 157 (408)
Q Consensus 79 l~~~~~iKl~DFGla~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~ 157 (408)
+++++.++|+|||++..+.... ......++..|+|||++.+. ..++.++|+||+||++|+|++|.+||...+..
T Consensus 133 ~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-----~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~ 207 (286)
T cd07846 133 VSQSGVVKLCDFGFARTLAAPGEVYTDYVATRWYRAPELLVGD-----TKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDI 207 (286)
T ss_pred ECCCCcEEEEeeeeeeeccCCccccCcccceeeccCcHHhccc-----cccCchHhHHHHHHHHHHHHcCCCCCCCCchH
Confidence 9999999999999987654432 22345688899999998642 34678899999999999999999999887766
Q ss_pred HHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcC
Q psy3880 158 VMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 237 (408)
Q Consensus 158 ~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~ 237 (408)
+....+......+..... + .+....+.-.+. .|-.... ...
T Consensus 208 ~~~~~~~~~~~~~~~~~~---------~------------------~~~~~~~~~~~~---~~~~~~~--~~~------- 248 (286)
T cd07846 208 DQLYHIIKCLGNLIPRHQ---------E------------------IFQKNPLFAGMR---LPEVKEI--EPL------- 248 (286)
T ss_pred HHHHHHHHHhCCCchhhH---------H------------------HhccchHhhccc---cccccCc--chH-------
Confidence 655555443221110000 0 000000000000 0000000 000
Q ss_pred CCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q psy3880 238 YSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFF 279 (408)
Q Consensus 238 ~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf 279 (408)
...+..++.++++||.+||..||++|||+.++|+||||
T Consensus 249 ----~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~ 286 (286)
T cd07846 249 ----EKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEFF 286 (286)
T ss_pred ----HHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcCCCC
Confidence 01134678999999999999999999999999999998
No 218
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.96 E-value=8.8e-30 Score=267.14 Aligned_cols=183 Identities=22% Similarity=0.352 Sum_probs=118.7
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEec-CCCEEEeccccchhcccCc--ccccCCCCCcccChhhhhhccc
Q psy3880 46 PALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDD-QMNVKLTDFGFARVLKKGE--KLMDLCGTPGYLAPEVLRANMF 122 (408)
Q Consensus 46 ~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl~~-~~~iKl~DFGla~~~~~~~--~~~~~~gt~~y~aPE~l~~~~~ 122 (408)
..++.++.||+.||+|||+++|+||||||+|||++. ++.+||+|||+|+.+..+. .....++|+.|+|||.+.....
T Consensus 255 ~~i~~i~~qll~aL~yLH~~gIiHRDLKP~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~ 334 (566)
T PLN03225 255 KIIQTIMRQILFALDGLHSTGIVHRDVKPQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQ 334 (566)
T ss_pred HHHHHHHHHHHHHHHHHHHCCEEeCcCCHHHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCC
Confidence 346789999999999999999999999999999985 5789999999998654332 2245789999999997643221
Q ss_pred cC----------------cCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHHHHHHHHh-ccccCCCCCCccCCCCCchH
Q psy3880 123 ED----------------ATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIME-GKYSFSSPEWNDISGYLAPE 185 (408)
Q Consensus 123 ~~----------------~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~~~~~i~~-~~~~~~~~~~~~~~~~~~PE 185 (408)
.. ...++.++||||+||++|+|+++..++. +....+..++. ..+. ..
T Consensus 335 ~~~~~~~~~~~~~sp~l~~~~~~~k~DVwSlGviL~el~~~~~~~~--~~~~~~~~~l~~~~~~--~~------------ 398 (566)
T PLN03225 335 TPSAPSAPVATALSPVLWQLNLPDRFDIYSAGLIFLQMAFPNLRSD--SNLIQFNRQLKRNDYD--LV------------ 398 (566)
T ss_pred CCCCccccccccccchhccccCCCCcccHHHHHHHHHHHhCcCCCc--hHHHHHHHHHHhcCCc--HH------------
Confidence 10 0124456789999999888887655532 22222222221 1000 00
Q ss_pred HHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCCCCCCCcCCCCCccHHHHHHHhcccCCC
Q psy3880 186 VLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPE 265 (408)
Q Consensus 186 ~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~ 265 (408)
.|. ..+... +.. + +.. .| ...+..+.++.|||++||++||+
T Consensus 399 ------------------~~~------~~~~~~--~~~----~----~~~---~~--~~~d~~~~~~~dLi~~mL~~dP~ 439 (566)
T PLN03225 399 ------------------AWR------KLVEPR--ASP----D----LRR---GF--EVLDLDGGAGWELLKSMMRFKGR 439 (566)
T ss_pred ------------------HHH------Hhhccc--cch----h----hhh---hh--hhccccchHHHHHHHHHccCCcc
Confidence 000 000000 000 0 000 00 01122345677999999999999
Q ss_pred CCCCHHHHHcCCCCCCCC
Q psy3880 266 DRYSVKEALNHSFFHPKL 283 (408)
Q Consensus 266 ~R~ta~e~L~Hpwf~~~~ 283 (408)
+|||+.|+|+||||+...
T Consensus 440 kR~ta~e~L~Hpff~~~~ 457 (566)
T PLN03225 440 QRISAKAALAHPYFDREG 457 (566)
T ss_pred cCCCHHHHhCCcCcCCCC
Confidence 999999999999998753
No 219
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=99.96 E-value=3.7e-30 Score=247.57 Aligned_cols=142 Identities=27% Similarity=0.465 Sum_probs=112.1
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC------CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcE
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN------SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENI 77 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~------~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NI 77 (408)
.+.|+|++ .+.+ ..++..++|+||+.++ +.+.+. ....++.++.|++.||+|||++||+||||||+||
T Consensus 59 ~l~h~ni~-~~~~~~~~~~~~~lv~e~~~~~---l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Ni 134 (291)
T cd07870 59 GLKHANIV-LLHDIIHTKETLTFVFEYMHTD---LAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNL 134 (291)
T ss_pred hcCCCCEe-EEEEEEecCCeEEEEEecccCC---HHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHE
Confidence 46899855 5554 3445678999999644 444332 3467889999999999999999999999999999
Q ss_pred EEecCCCEEEeccccchhcccC-cccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchh
Q psy3880 78 LLDDQMNVKLTDFGFARVLKKG-EKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQ 156 (408)
Q Consensus 78 Ll~~~~~iKl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~ 156 (408)
|++.++.+||+|||+++..... .......+++.|+|||.+.+. ..++.++|+||+||++|+|++|..||.+.+.
T Consensus 135 l~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-----~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~ 209 (291)
T cd07870 135 LISYLGELKLADFGLARAKSIPSQTYSSEVVTLWYRPPDVLLGA-----TDYSSALDIWGAGCIFIEMLQGQPAFPGVSD 209 (291)
T ss_pred EEcCCCcEEEeccccccccCCCCCCCCCccccccccCCceeecC-----CCCCcHHHHHHHHHHHHHHHhCCCCCCCchh
Confidence 9999999999999998754322 222335678999999987532 3467889999999999999999999976553
No 220
>KOG0197|consensus
Probab=99.96 E-value=3.7e-30 Score=255.95 Aligned_cols=186 Identities=25% Similarity=0.462 Sum_probs=151.0
Q ss_pred cccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhCCH-------HHHHHHHHHHHHHHHHHHHCCCeeccCCCCcE
Q psy3880 7 VAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIINSN-------PALRYIMRQLFEALEHVHNHSVVHRDLKPENI 77 (408)
Q Consensus 7 ~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~~~-------~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NI 77 (408)
|.|++ ||+++. +.+...|||||||..|. |.+++... +++..++.||++|++||+++++|||||.+.||
T Consensus 258 L~H~~-lV~l~gV~~~~~piyIVtE~m~~Gs--Ll~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNi 334 (468)
T KOG0197|consen 258 LRHEK-LVKLYGVCTKQEPIYIVTEYMPKGS--LLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNI 334 (468)
T ss_pred CcccC-eEEEEEEEecCCceEEEEEecccCc--HHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhhe
Confidence 67998 557776 44457899999999999 99998762 78899999999999999999999999999999
Q ss_pred EEecCCCEEEeccccchhcccCcccccCCC--CCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHh-CCCCCCCc
Q psy3880 78 LLDDQMNVKLTDFGFARVLKKGEKLMDLCG--TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPFWHR 154 (408)
Q Consensus 78 Ll~~~~~iKl~DFGla~~~~~~~~~~~~~g--t~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~-G~~pf~~~ 154 (408)
|++++..+||+|||+|+...++.......+ ...|.|||.+..+ .|+.+||||||||++||++| |+.|+.+.
T Consensus 335 LV~~~~~vKIsDFGLAr~~~d~~Y~~~~~~kfPIkWtAPEa~~~~------~FS~kSDVWSFGVlL~E~fT~G~~py~~m 408 (468)
T KOG0197|consen 335 LVDEDLVVKISDFGLARLIGDDEYTASEGGKFPIKWTAPEALNYG------KFSSKSDVWSFGVLLWELFTYGRVPYPGM 408 (468)
T ss_pred eeccCceEEEcccccccccCCCceeecCCCCCCceecCHHHHhhC------CcccccceeehhhhHHHHhccCCCCCCCC
Confidence 999999999999999996555443222222 2369999999864 47889999999999999997 88888887
Q ss_pred hhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHH
Q psy3880 155 KQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIM 234 (408)
Q Consensus 155 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~ 234 (408)
+..+.+..+.+|.
T Consensus 409 sn~ev~~~le~Gy------------------------------------------------------------------- 421 (468)
T KOG0197|consen 409 SNEEVLELLERGY------------------------------------------------------------------- 421 (468)
T ss_pred CHHHHHHHHhccC-------------------------------------------------------------------
Confidence 7777777766553
Q ss_pred hcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHH
Q psy3880 235 EGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEAL 274 (408)
Q Consensus 235 ~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L 274 (408)
..+.| ...+++.-+++..|...+|++|||.+.+.
T Consensus 422 ----Rlp~P--~~CP~~vY~lM~~CW~~~P~~RPtF~~L~ 455 (468)
T KOG0197|consen 422 ----RLPRP--EGCPDEVYELMKSCWHEDPEDRPTFETLR 455 (468)
T ss_pred ----cCCCC--CCCCHHHHHHHHHHhhCCcccCCCHHHHH
Confidence 12222 35788899999999999999999987543
No 221
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.96 E-value=4.5e-30 Score=252.41 Aligned_cols=222 Identities=26% Similarity=0.418 Sum_probs=155.5
Q ss_pred ccCCcEEEEec------cCCcHHHHHHHHHhhchhhHHhhhC-----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCc
Q psy3880 8 AHSRVVVRVKE------EGDDLKHLAAQVVDKGEAAVQDIIN-----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPEN 76 (408)
Q Consensus 8 ~~~~~i~~~~~------~~~~~~~lv~e~~~~g~~~l~~~~~-----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~N 76 (408)
.|+|++ .+.. ......|+++|++.+ . |.+.+. ++++++.++.||+.||+|||++||+||||||+|
T Consensus 60 ~h~~iv-~~~~~~~~~~~~~~~~~~~~e~~~~-~--L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~N 135 (332)
T cd07857 60 GHKNIT-CLYDMDIVFPGNFNELYLYEELMEA-D--LHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGN 135 (332)
T ss_pred CCCChh-eeeeeeeeccccCCcEEEEEecccC-C--HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHH
Confidence 588755 5443 122345788888864 4 666553 458899999999999999999999999999999
Q ss_pred EEEecCCCEEEeccccchhcccCc-----ccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCC
Q psy3880 77 ILLDDQMNVKLTDFGFARVLKKGE-----KLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151 (408)
Q Consensus 77 ILl~~~~~iKl~DFGla~~~~~~~-----~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf 151 (408)
|+++.++.+||+|||++..+.... ......||+.|+|||.+... ..++.++|+||+||++|++++|.+||
T Consensus 136 ili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-----~~~~~~~Di~slGv~l~~l~~g~~pf 210 (332)
T cd07857 136 LLVNADCELKICDFGLARGFSENPGENAGFMTEYVATRWYRAPEIMLSF-----QSYTKAIDVWSVGCILAELLGRKPVF 210 (332)
T ss_pred eEEcCCCCEEeCcCCCceecccccccccccccCcccCccccCcHHHhCC-----CCCCcHHHHHHHHHHHHHHHhCCcCC
Confidence 999999999999999997654321 12335789999999987542 35788999999999999999999999
Q ss_pred CCchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHH
Q psy3880 152 WHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLR 231 (408)
Q Consensus 152 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~ 231 (408)
.+.+....+..+........ ++.+..-. + ........
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~-----------~--------------------~~~~~~~~ 247 (332)
T cd07857 211 KGKDYVDQLNQILQVLGTPD------------EETLSRIG-----------S--------------------PKAQNYIR 247 (332)
T ss_pred CCCCHHHHHHHHHHHhCCCC------------HHHHHhhh-----------h--------------------hhHHHHHH
Confidence 98887777766665432111 01100000 0 00000000
Q ss_pred HHHhcC-CCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q psy3880 232 NIMEGK-YSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPK 282 (408)
Q Consensus 232 ~i~~~~-~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~ 282 (408)
...... ..+. ..+..++.++++||.+||+.||++|||+.|++.||||...
T Consensus 248 ~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~~~~~ 298 (332)
T cd07857 248 SLPNIPKKPFE-SIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPYLAIW 298 (332)
T ss_pred hccccCCcchH-hhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhhhh
Confidence 000000 0011 1234568899999999999999999999999999999643
No 222
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.96 E-value=5.1e-30 Score=244.49 Aligned_cols=221 Identities=25% Similarity=0.433 Sum_probs=157.0
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC------CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcE
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN------SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENI 77 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~------~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NI 77 (408)
.+.|++++ .+.+ ...+..++|+||+.+ . +.+.+. +...+..++.|++.||.|||+++|+|+||||+||
T Consensus 54 ~l~~~~i~-~~~~~~~~~~~~~~v~e~~~~-~--l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~ni 129 (283)
T cd05118 54 ELNHPNII-KLLDVFRHKGDLYLVFEFMDT-D--LYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENL 129 (283)
T ss_pred HhcCCCcc-hHHHhhccCCCEEEEEeccCC-C--HHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHE
Confidence 35677644 5554 345677899999976 3 444432 3478899999999999999999999999999999
Q ss_pred EEecCCCEEEeccccchhcccCc-ccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchh
Q psy3880 78 LLDDQMNVKLTDFGFARVLKKGE-KLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQ 156 (408)
Q Consensus 78 Ll~~~~~iKl~DFGla~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~ 156 (408)
+++.++.++|+|||.+....... ......++..|+|||.+... ..++.++|+||+||++|+|++|+.||.+.+.
T Consensus 130 li~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~-----~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~ 204 (283)
T cd05118 130 LINTEGVLKLADFGLARSFGSPVRPYTHYVVTRWYRAPELLLGD-----KGYSTPVDIWSVGCIFAELLSRRPLFPGKSE 204 (283)
T ss_pred EECCCCcEEEeeeeeeEecCCCcccccCccCcccccCcHHHhcC-----CCCCchhHHHHHHHHHHHHHhCCCCCCCCCH
Confidence 99999999999999987765443 22335678899999998642 3568899999999999999999999988887
Q ss_pred HHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhc
Q psy3880 157 MVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEG 236 (408)
Q Consensus 157 ~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~ 236 (408)
.+.+.++.+.........|...... .+..+ ..|. ..
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~----------~~~~------------~~ 240 (283)
T cd05118 205 IDQLFKIFRTLGTPDPEVWPKFTSL----------------------ARNYK----------FSFP------------KK 240 (283)
T ss_pred HHHHHHHHHHcCCCchHhcccchhh----------------------hhhhh----------hhhc------------cc
Confidence 7776666543222111111111000 00000 0000 00
Q ss_pred CCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q psy3880 237 KYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFF 279 (408)
Q Consensus 237 ~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf 279 (408)
........+..++.++++||.+||..||.+|||+.++++||||
T Consensus 241 ~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~~~~ 283 (283)
T cd05118 241 AGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHPYF 283 (283)
T ss_pred cccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhCCCC
Confidence 0000011234578999999999999999999999999999997
No 223
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.96 E-value=1.2e-29 Score=242.45 Aligned_cols=216 Identities=31% Similarity=0.480 Sum_probs=154.6
Q ss_pred cccCCcEEEEecc--CCc-----HHHHHHHHHhhchhhHHhhh-------CCHHHHHHHHHHHHHHHHHHHHCCCeeccC
Q psy3880 7 VAHSRVVVRVKEE--GDD-----LKHLAAQVVDKGEAAVQDII-------NSNPALRYIMRQLFEALEHVHNHSVVHRDL 72 (408)
Q Consensus 7 ~~~~~~i~~~~~~--~~~-----~~~lv~e~~~~g~~~l~~~~-------~~~~~~r~i~~qil~aL~~LH~~~IvHRDL 72 (408)
+.|++++ .+.+. ..+ ..+++||++.+ . |.+.+ .+...+..++.|++.||.|||+++++|+||
T Consensus 58 ~~h~~i~-~~~~~~~~~~~~~~~~~~l~~e~~~~-~--l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l 133 (287)
T cd07838 58 FEHPNIV-RLLDVCHGPRTDRELKLTLVFEHVDQ-D--LATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDL 133 (287)
T ss_pred cCCCCcc-eEEEEEeeccCCCCceeEEEehhccc-C--HHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccC
Confidence 3588755 54432 222 27899999975 3 44433 245788999999999999999999999999
Q ss_pred CCCcEEEecCCCEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCC
Q psy3880 73 KPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFW 152 (408)
Q Consensus 73 Kp~NILl~~~~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~ 152 (408)
+|+||+++.++.+||+|||++..+..........+++.|+|||++.. ..++.++|+||+||++|+|++|.+||.
T Consensus 134 ~~~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~PE~~~~------~~~~~~~Di~s~G~~l~~l~~~~~~~~ 207 (287)
T cd07838 134 KPQNILVTSDGQVKIADFGLARIYSFEMALTSVVVTLWYRAPEVLLQ------SSYATPVDMWSVGCIFAELFRRRPLFR 207 (287)
T ss_pred ChhhEEEccCCCEEEeccCcceeccCCcccccccccccccChHHhcc------CCCCCcchhhhHHHHHHHHHhCCCccc
Confidence 99999999999999999999987755544445568889999999864 346789999999999999999999999
Q ss_pred CchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHH
Q psy3880 153 HRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRN 232 (408)
Q Consensus 153 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~ 232 (408)
+.+..+.+.++...........|..... ... ..|.....
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~--------------~~~~~~~~------ 246 (287)
T cd07838 208 GTSEADQLDKIFDVIGLPSEEEWPRNVS---------------------LPR--------------SSFPSYTP------ 246 (287)
T ss_pred CCChHHHHHHHHHHcCCCChHhcCCCcc---------------------cch--------------hhcccccc------
Confidence 9888777777654221111010000000 000 00000000
Q ss_pred HHhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q psy3880 233 IMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFF 279 (408)
Q Consensus 233 i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf 279 (408)
.........+++++.+||.+||..||++|||++|+|+||||
T Consensus 247 ------~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~~~~ 287 (287)
T cd07838 247 ------RSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQHPYF 287 (287)
T ss_pred ------cchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcCcCC
Confidence 00001113467899999999999999999999999999998
No 224
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.96 E-value=1.1e-29 Score=251.28 Aligned_cols=222 Identities=23% Similarity=0.434 Sum_probs=155.2
Q ss_pred ccccCCcEEEEeccC--------CcHHHHHHHHHhhchhhHHhhh----CCHHHHHHHHHHHHHHHHHHHHCCCeeccCC
Q psy3880 6 MVAHSRVVVRVKEEG--------DDLKHLAAQVVDKGEAAVQDII----NSNPALRYIMRQLFEALEHVHNHSVVHRDLK 73 (408)
Q Consensus 6 ~~~~~~~i~~~~~~~--------~~~~~lv~e~~~~g~~~l~~~~----~~~~~~r~i~~qil~aL~~LH~~~IvHRDLK 73 (408)
.+.|+|++ .+.+.. .+..|++++++ |+. |.+.+ .+...++.++.|++.||+|||++||+|||||
T Consensus 72 ~l~h~~iv-~~~~~~~~~~~~~~~~~~~lv~~~~-~~~--L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlk 147 (345)
T cd07877 72 HMKHENVI-GLLDVFTPARSLEEFNDVYLVTHLM-GAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLK 147 (345)
T ss_pred HcCCCccc-ceeeeeeecccccccccEEEEehhc-ccC--HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCC
Confidence 35788754 544321 13357888887 555 65544 3457889999999999999999999999999
Q ss_pred CCcEEEecCCCEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCC
Q psy3880 74 PENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH 153 (408)
Q Consensus 74 p~NILl~~~~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~ 153 (408)
|+||+++.++.+||+|||++..... ......+++.|+|||.+.. ...++.++|+||+||++|+|++|..||..
T Consensus 148 p~NIll~~~~~~kl~dfg~~~~~~~--~~~~~~~~~~y~aPE~~~~-----~~~~~~~~DvwslG~il~el~~g~~pf~~ 220 (345)
T cd07877 148 PSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLN-----WMHYNQTVDIWSVGCIMAELLTGRTLFPG 220 (345)
T ss_pred hHHEEEcCCCCEEEecccccccccc--cccccccCCCccCHHHHhC-----ccCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 9999999999999999999876533 2234678999999998854 23577899999999999999999999988
Q ss_pred chhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHH
Q psy3880 154 RKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI 233 (408)
Q Consensus 154 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i 233 (408)
.+....+..+....... .|+.+..- ++ .........+
T Consensus 221 ~~~~~~~~~~~~~~~~~------------~~~~~~~~----------------------------~~---~~~~~~~~~~ 257 (345)
T cd07877 221 TDHIDQLKLILRLVGTP------------GAELLKKI----------------------------SS---ESARNYIQSL 257 (345)
T ss_pred CCHHHHHHHHHHHhCCC------------CHHHHhhc----------------------------cc---HhHHHHHHHh
Confidence 77766666665433211 11111000 00 0000000000
Q ss_pred Hhc-CCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q psy3880 234 MEG-KYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPK 282 (408)
Q Consensus 234 ~~~-~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~ 282 (408)
... ...+ ...+...+++++|||.+||+.||.+|+|+.++|+||||...
T Consensus 258 ~~~~~~~~-~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~f~~~ 306 (345)
T cd07877 258 TQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 306 (345)
T ss_pred cccCCcch-hhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChhhhhc
Confidence 000 0000 01123468899999999999999999999999999999864
No 225
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=99.96 E-value=6e-30 Score=241.32 Aligned_cols=198 Identities=30% Similarity=0.468 Sum_probs=150.1
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC------CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcE
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN------SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENI 77 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~------~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NI 77 (408)
.+.|++++ .+.+ ...+..|++|||+.++. |.+.+. ++.++..++.|++.||.|||++||+|+||||+||
T Consensus 56 ~~~h~~i~-~~~~~~~~~~~~~l~~e~~~~~~--l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni 132 (262)
T cd06613 56 ECRHPNIV-AYFGSYLRRDKLWIVMEYCGGGS--LQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANI 132 (262)
T ss_pred hCCCCChh-ceEEEEEeCCEEEEEEeCCCCCc--HHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhE
Confidence 46788865 4443 44566789999999987 665542 3478899999999999999999999999999999
Q ss_pred EEecCCCEEEeccccchhcccCc-ccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchh
Q psy3880 78 LLDDQMNVKLTDFGFARVLKKGE-KLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQ 156 (408)
Q Consensus 78 Ll~~~~~iKl~DFGla~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~ 156 (408)
+++.++.+||+|||++....... ......++..|+|||.+.... ...++.++|+||+||++|+|++|.+||...+.
T Consensus 133 ~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~---~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~ 209 (262)
T cd06613 133 LLTEDGDVKLADFGVSAQLTATIAKRKSFIGTPYWMAPEVAAVER---KGGYDGKCDIWALGITAIELAELQPPMFDLHP 209 (262)
T ss_pred EECCCCCEEECccccchhhhhhhhccccccCCccccCchhhcccc---cCCcCchhhhHHHHHHHHHHHhCCCCCCCCCH
Confidence 99999999999999987665432 223467889999999986421 12567899999999999999999999976554
Q ss_pred HHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhc
Q psy3880 157 MVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEG 236 (408)
Q Consensus 157 ~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~ 236 (408)
......+....+. ++.
T Consensus 210 ~~~~~~~~~~~~~-------------------------------------------------~~~--------------- 225 (262)
T cd06613 210 MRALFLISKSNFP-------------------------------------------------PPK--------------- 225 (262)
T ss_pred HHHHHHHHhccCC-------------------------------------------------Ccc---------------
Confidence 3333222211000 000
Q ss_pred CCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCC
Q psy3880 237 KYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSF 278 (408)
Q Consensus 237 ~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpw 278 (408)
. .....++.++++||++||..||.+|||+.+++.|||
T Consensus 226 ---~--~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~ 262 (262)
T cd06613 226 ---L--KDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQHPF 262 (262)
T ss_pred ---c--cchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcCCC
Confidence 0 001234678999999999999999999999999998
No 226
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=99.96 E-value=9.4e-30 Score=241.28 Aligned_cols=193 Identities=27% Similarity=0.478 Sum_probs=146.0
Q ss_pred ccccCCcEEEEecc----CCcHHHHHHHHHhhchhhHHhhhC-----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCc
Q psy3880 6 MVAHSRVVVRVKEE----GDDLKHLAAQVVDKGEAAVQDIIN-----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPEN 76 (408)
Q Consensus 6 ~~~~~~~i~~~~~~----~~~~~~lv~e~~~~g~~~l~~~~~-----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~N 76 (408)
.+.|++++ .+... ..+..|++|||+.||. |.+++. +...+..++.|++.||+|||+++|+|+||||+|
T Consensus 60 ~l~h~~i~-~~~~~~~~~~~~~~~~v~e~~~~~~--L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~n 136 (265)
T cd06652 60 NLLHERIV-QYYGCLRDPMERTLSIFMEHMPGGS--IKDQLKSYGALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGAN 136 (265)
T ss_pred hcCCCCee-eEEeEeccCCCceEEEEEEecCCCc--HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHH
Confidence 46788865 44431 2345679999999998 777652 446788899999999999999999999999999
Q ss_pred EEEecCCCEEEeccccchhcccC----cccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCC
Q psy3880 77 ILLDDQMNVKLTDFGFARVLKKG----EKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFW 152 (408)
Q Consensus 77 ILl~~~~~iKl~DFGla~~~~~~----~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~ 152 (408)
|+++.++.++|+|||++...... .......|+..|+|||.+.. ..++.++|+||+||++|+|++|..||.
T Consensus 137 il~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~slG~il~el~~g~~p~~ 210 (265)
T cd06652 137 ILRDSVGNVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVISG------EGYGRKADIWSVGCTVVEMLTEKPPWA 210 (265)
T ss_pred EEecCCCCEEECcCccccccccccccccccccCCCCccccChhhhcC------CCCCcchhHHHHHHHHHHHhhCCCCCC
Confidence 99999999999999998765321 11233568899999998864 346789999999999999999999996
Q ss_pred CchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHH
Q psy3880 153 HRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRN 232 (408)
Q Consensus 153 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~ 232 (408)
.......+.++...
T Consensus 211 ~~~~~~~~~~~~~~------------------------------------------------------------------ 224 (265)
T cd06652 211 EFEAMAAIFKIATQ------------------------------------------------------------------ 224 (265)
T ss_pred ccchHHHHHHHhcC------------------------------------------------------------------
Confidence 54332222211100
Q ss_pred HHhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCC
Q psy3880 233 IMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFH 280 (408)
Q Consensus 233 i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~ 280 (408)
.... .....++..+.++|++||. +|++|||++|+++|||+.
T Consensus 225 ----~~~~--~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~~~~~ 265 (265)
T cd06652 225 ----PTNP--VLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRHTFVH 265 (265)
T ss_pred ----CCCC--CCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcCcccC
Confidence 0000 0012467889999999995 999999999999999984
No 227
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.96 E-value=5.4e-30 Score=253.07 Aligned_cols=219 Identities=25% Similarity=0.413 Sum_probs=154.6
Q ss_pred ccccCCcEEEEeccCC--------cHHHHHHHHHhhchhhHHhh---hCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCC
Q psy3880 6 MVAHSRVVVRVKEEGD--------DLKHLAAQVVDKGEAAVQDI---INSNPALRYIMRQLFEALEHVHNHSVVHRDLKP 74 (408)
Q Consensus 6 ~~~~~~~i~~~~~~~~--------~~~~lv~e~~~~g~~~l~~~---~~~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp 74 (408)
.+.|+|++ .+.+... ...|+|+||+.. . +... ..+.+.+..++.|++.||+|||++||+||||||
T Consensus 70 ~l~h~niv-~~~~~~~~~~~~~~~~~~~lv~e~~~~-~--l~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp 145 (342)
T cd07879 70 HMQHENVI-GLLDVFTSAVSGDEFQDFYLVMPYMQT-D--LQKIMGHPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKP 145 (342)
T ss_pred hcCCCCcc-chhheecccccCCCCceEEEEeccccc-C--HHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCH
Confidence 46788755 5544211 124789998864 3 4443 235688999999999999999999999999999
Q ss_pred CcEEEecCCCEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCc
Q psy3880 75 ENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHR 154 (408)
Q Consensus 75 ~NILl~~~~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~ 154 (408)
+|||++.++.+||+|||+++.... ......+++.|+|||.+... ..++.++|+||+||++|+|++|+.||.+.
T Consensus 146 ~NIll~~~~~~kL~dfg~~~~~~~--~~~~~~~~~~y~aPE~~~~~-----~~~~~~~Dv~slGvil~el~~g~~pf~~~ 218 (342)
T cd07879 146 GNLAVNEDCELKILDFGLARHADA--EMTGYVVTRWYRAPEVILNW-----MHYNQTVDIWSVGCIMAEMLTGKTLFKGK 218 (342)
T ss_pred HHEEECCCCCEEEeeCCCCcCCCC--CCCCceeeecccChhhhcCc-----cccCchHHHHHHHHHHHHHHhCCCCCCCC
Confidence 999999999999999999876432 22345778999999998642 34678999999999999999999999988
Q ss_pred hhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHH
Q psy3880 155 KQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIM 234 (408)
Q Consensus 155 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~ 234 (408)
+....+..+...... ..|+....- +.. ......
T Consensus 219 ~~~~~~~~~~~~~~~------------~~~~~~~~~------------~~~-----------------------~~~~~~ 251 (342)
T cd07879 219 DYLDQLTQILKVTGV------------PGPEFVQKL------------EDK-----------------------AAKSYI 251 (342)
T ss_pred CHHHHHHHHHHhcCC------------CCHHHHHHh------------ccc-----------------------chHHHH
Confidence 766666665543210 111111000 000 000000
Q ss_pred hcCCCCCC----CcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q psy3880 235 EGKYSFSS----PEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPK 282 (408)
Q Consensus 235 ~~~~~f~~----~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~ 282 (408)
.....+.. ..+..+++++++||++||+.||++|||++|+|.||||...
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~ 303 (342)
T cd07879 252 KSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSF 303 (342)
T ss_pred hhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhc
Confidence 00000110 1124578899999999999999999999999999999865
No 228
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=99.96 E-value=1.3e-29 Score=238.27 Aligned_cols=193 Identities=30% Similarity=0.508 Sum_probs=150.0
Q ss_pred cccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhh-----CCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEE
Q psy3880 7 VAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDII-----NSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILL 79 (408)
Q Consensus 7 ~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~-----~~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl 79 (408)
+.|++++ .+.. +.++..|+++||+.++. |.+.+ .+...+..++.||+.||+|||+.||+|+||+|+||++
T Consensus 59 ~~h~~i~-~~~~~~~~~~~~~lv~e~~~~~~--L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~ 135 (258)
T cd06632 59 LQHPNIV-QYLGTEREEDNLYIFLELVPGGS--LAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILV 135 (258)
T ss_pred cCCCCch-heeeeEecCCeEEEEEEecCCCc--HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE
Confidence 5788755 4443 44566789999999988 77665 2457788899999999999999999999999999999
Q ss_pred ecCCCEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHHH
Q psy3880 80 DDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVM 159 (408)
Q Consensus 80 ~~~~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~~ 159 (408)
+.++.+||+|||++.............|++.|+|||.+... ..++.++|+||+||++|++++|..||........
T Consensus 136 ~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~-----~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~ 210 (258)
T cd06632 136 DTNGVVKLADFGMAKQVVEFSFAKSFKGSPYWMAPEVIAQQ-----GGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAA 210 (258)
T ss_pred CCCCCEEEccCccceeccccccccccCCCcceeCHHHhcCC-----CCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHH
Confidence 99999999999998776544333456789999999998542 1367899999999999999999999965432222
Q ss_pred HHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCCC
Q psy3880 160 LRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYS 239 (408)
Q Consensus 160 ~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~~ 239 (408)
..++... ..
T Consensus 211 ~~~~~~~---------------------------------------------------------------------~~-- 219 (258)
T cd06632 211 VFKIGRS---------------------------------------------------------------------KE-- 219 (258)
T ss_pred HHHHHhc---------------------------------------------------------------------cc--
Confidence 1111100 00
Q ss_pred CCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q psy3880 240 FSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFF 279 (408)
Q Consensus 240 f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf 279 (408)
.......+++++++||++||..||++|||+.++|.|||+
T Consensus 220 -~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~ 258 (258)
T cd06632 220 -LPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLEHPFV 258 (258)
T ss_pred -CCCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhcCCCC
Confidence 001123468899999999999999999999999999996
No 229
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.96 E-value=3.3e-30 Score=254.69 Aligned_cols=207 Identities=27% Similarity=0.499 Sum_probs=149.7
Q ss_pred HHHHHHHHhhchhhHHhhh----CCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEecCCCEEEeccccchhcccC
Q psy3880 24 KHLAAQVVDKGEAAVQDII----NSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKG 99 (408)
Q Consensus 24 ~~lv~e~~~~g~~~l~~~~----~~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl~~~~~iKl~DFGla~~~~~~ 99 (408)
.++|+|++ |+. |.+.+ .+.+++..++.|++.||+|||++||+||||||+||+++.++.+||+|||++......
T Consensus 95 ~~lv~e~~-~~~--L~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~~~~ 171 (343)
T cd07851 95 VYLVTHLM-GAD--LNNIVKCQKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARHTDDE 171 (343)
T ss_pred EEEEEecC-CCC--HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEcccccccccccc
Confidence 68999998 455 66654 345889999999999999999999999999999999999999999999999865432
Q ss_pred cccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHHHHHHHHhccccCCCCCCccCC
Q psy3880 100 EKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDIS 179 (408)
Q Consensus 100 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 179 (408)
.....+++.|+|||.+... ..++.++|+||+||++|++++|..||.+.+....+..+.+.....
T Consensus 172 --~~~~~~~~~y~aPE~~~~~-----~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~--------- 235 (343)
T cd07851 172 --MTGYVATRWYRAPEIMLNW-----MHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTP--------- 235 (343)
T ss_pred --ccCCcccccccCHHHHhCC-----CCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCC---------
Confidence 3456788999999998642 246789999999999999999999999888777777666542111
Q ss_pred CCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCCCCCCCcCCCCCccHHHHHHHh
Q psy3880 180 GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKL 259 (408)
Q Consensus 180 ~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~~f~~~~~~~iS~~~~dLI~kl 259 (408)
.++.+ ... ..+ ..+. + ....|..... .+. ..+...|+++.|||++|
T Consensus 236 ---~~~~~-~~~---------~~~--~~~~--~---~~~~~~~~~~-------------~~~-~~~~~~s~~l~dli~~~ 281 (343)
T cd07851 236 ---DEELL-QKI---------SSE--SARN--Y---IQSLPQMPKK-------------DFK-EVFSGANPLAIDLLEKM 281 (343)
T ss_pred ---CHHHH-hhc---------cch--hHHH--H---HHhccccCCC-------------CHH-HHhccCCHHHHHHHHHh
Confidence 11111 000 000 0000 0 0000110000 000 11234688999999999
Q ss_pred cccCCCCCCCHHHHHcCCCCCCCC
Q psy3880 260 LIVTPEDRYSVKEALNHSFFHPKL 283 (408)
Q Consensus 260 L~~dP~~R~ta~e~L~Hpwf~~~~ 283 (408)
|..||++|||+.|+|+||||....
T Consensus 282 l~~~P~~Rpt~~ell~h~~~~~~~ 305 (343)
T cd07851 282 LVLDPDKRITAAEALAHPYLAEYH 305 (343)
T ss_pred CCCChhhCCCHHHHhcCCCccccC
Confidence 999999999999999999998654
No 230
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.96 E-value=1.4e-29 Score=244.51 Aligned_cols=221 Identities=29% Similarity=0.443 Sum_probs=154.1
Q ss_pred ccccCCcEEEEeccC------------CcHHHHHHHHHhhchhhHHhhh------CCHHHHHHHHHHHHHHHHHHHHCCC
Q psy3880 6 MVAHSRVVVRVKEEG------------DDLKHLAAQVVDKGEAAVQDII------NSNPALRYIMRQLFEALEHVHNHSV 67 (408)
Q Consensus 6 ~~~~~~~i~~~~~~~------------~~~~~lv~e~~~~g~~~l~~~~------~~~~~~r~i~~qil~aL~~LH~~~I 67 (408)
.+.|+|++ .+.+.. ....++|+||+.++. .+.+ .+.+.++.++.|++.||+|||++||
T Consensus 62 ~l~h~~i~-~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~l---~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i 137 (302)
T cd07864 62 QLNHRNIV-NLKEIVTDKQDALDFKKDKGAFYLVFEYMDHDL---MGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKNF 137 (302)
T ss_pred hCCCCCee-eeeheecCcchhhhccccCCcEEEEEcccCccH---HHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 35788755 544321 125689999998753 3333 2458899999999999999999999
Q ss_pred eeccCCCCcEEEecCCCEEEeccccchhcccCc--ccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHH
Q psy3880 68 VHRDLKPENILLDDQMNVKLTDFGFARVLKKGE--KLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLL 145 (408)
Q Consensus 68 vHRDLKp~NILl~~~~~iKl~DFGla~~~~~~~--~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll 145 (408)
+||||||+||++++++.+||+|||++..+.... ......+++.|+|||.+... ..++.++|+||+||++++|+
T Consensus 138 ~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~-----~~~~~~~Di~slG~~~~el~ 212 (302)
T cd07864 138 LHRDIKCSNILLNNKGQIKLADFGLARLYNSEESRPYTNKVITLWYRPPELLLGE-----ERYGPAIDVWSCGCILGELF 212 (302)
T ss_pred ecCCCCHHHEEECCCCcEEeCcccccccccCCcccccccceeccCccChHHhcCC-----CCCCchhHHHHHHHHHHHHH
Confidence 999999999999999999999999998664432 11223567889999987532 34578999999999999999
Q ss_pred hCCCCCCCchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCch
Q psy3880 146 VGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRK 225 (408)
Q Consensus 146 ~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~ 225 (408)
+|++||...+....+..+...........|...... +.|....
T Consensus 213 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------------~~~~~~~ 255 (302)
T cd07864 213 TKKPIFQANQELAQLELISRLCGSPCPAVWPDVIKL-------------------------------------PYFNTMK 255 (302)
T ss_pred hCCCCCCCCChHHHHHHHHHHhCCCChhhccccccc-------------------------------------ccccccc
Confidence 999999887776666665543222221111111000 0000000
Q ss_pred hHHHHHHHHhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q psy3880 226 QMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFF 279 (408)
Q Consensus 226 ~~~~~~~i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf 279 (408)
... .........+..++.++++||.+||..||++|||+++++.||||
T Consensus 256 ~~~-------~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~ 302 (302)
T cd07864 256 PKK-------QYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNSPWL 302 (302)
T ss_pred ccc-------ccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcCCCC
Confidence 000 00000112234578899999999999999999999999999997
No 231
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=99.96 E-value=6.6e-30 Score=244.45 Aligned_cols=219 Identities=27% Similarity=0.430 Sum_probs=153.2
Q ss_pred cccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhh-------CCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcE
Q psy3880 7 VAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDII-------NSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENI 77 (408)
Q Consensus 7 ~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~-------~~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NI 77 (408)
+.|++++ .+.+ ...+..|+++||+.+ . |.+.+ .+...+..++.|++.||+|||+++++||||+|+||
T Consensus 55 l~~~~iv-~~~~~~~~~~~~~iv~e~~~~-~--l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~ni 130 (283)
T cd07835 55 LNHPNIV-RLLDVVHSENKLYLVFEFLDL-D--LKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNL 130 (283)
T ss_pred cCCCCcc-CHhheeccCCeEEEEEeccCc-C--HHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHE
Confidence 5688755 4433 445677899999954 4 55544 24578899999999999999999999999999999
Q ss_pred EEecCCCEEEeccccchhcccCc-ccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchh
Q psy3880 78 LLDDQMNVKLTDFGFARVLKKGE-KLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQ 156 (408)
Q Consensus 78 Ll~~~~~iKl~DFGla~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~ 156 (408)
+++.++.++|+|||++..+.... ......+++.|+|||++... ..++.++|+||+||++|+|++|++||...+.
T Consensus 131 l~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-----~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~ 205 (283)
T cd07835 131 LIDREGALKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGS-----RQYSTPVDIWSIGCIFAEMVNRRPLFPGDSE 205 (283)
T ss_pred EEcCCCcEEEeecccccccCCCccccCccccccCCCCCceeecC-----cccCcHHHHHHHHHHHHHHHhCCCCCCCCCH
Confidence 99999999999999987654322 22234568899999987542 3467899999999999999999999988776
Q ss_pred HHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhc
Q psy3880 157 MVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEG 236 (408)
Q Consensus 157 ~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~ 236 (408)
...+.++.......... .|..-..+..... .....
T Consensus 206 ~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~~~---------------~~~~~ 240 (283)
T cd07835 206 IDQLFRIFRTLGTPDED------------------------------VWPGVTSLPDYKP---------------TFPKW 240 (283)
T ss_pred HHHHHHHHHHhCCCChH------------------------------Hhhhhhhchhhhh---------------hcccc
Confidence 66655554432211111 1100000000000 00000
Q ss_pred CCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q psy3880 237 KYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFF 279 (408)
Q Consensus 237 ~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf 279 (408)
...........++.++.+||.+||..||++|||++|++.||||
T Consensus 241 ~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~ 283 (283)
T cd07835 241 ARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHPYF 283 (283)
T ss_pred cccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcCCCC
Confidence 0000011123578899999999999999999999999999998
No 232
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=99.96 E-value=1.2e-29 Score=242.61 Aligned_cols=190 Identities=18% Similarity=0.330 Sum_probs=146.3
Q ss_pred ccccCCcEEEEec-cCCcHHHHHHHHHhhchhhHHhhhCC---------------------HHHHHHHHHHHHHHHHHHH
Q psy3880 6 MVAHSRVVVRVKE-EGDDLKHLAAQVVDKGEAAVQDIINS---------------------NPALRYIMRQLFEALEHVH 63 (408)
Q Consensus 6 ~~~~~~~i~~~~~-~~~~~~~lv~e~~~~g~~~l~~~~~~---------------------~~~~r~i~~qil~aL~~LH 63 (408)
.+.|++++.-+.. ..+...+++|||+.+|. |.+.+.. ..++..++.|++.||.|||
T Consensus 64 ~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~--L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH 141 (283)
T cd05048 64 DLQHPNIVCLLGVCTKEQPTCMLFEYLAHGD--LHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLS 141 (283)
T ss_pred hcCCcccceEEEEEcCCCceEEEEecCCCCc--HHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 3678886533332 34556789999999998 7776632 3567889999999999999
Q ss_pred HCCCeeccCCCCcEEEecCCCEEEeccccchhcccCcc---cccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHH
Q psy3880 64 NHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEK---LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVI 140 (408)
Q Consensus 64 ~~~IvHRDLKp~NILl~~~~~iKl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvi 140 (408)
++||+||||||+||++++++.+||+|||++........ .....+++.|+|||.+.. ..++.++|+||+||+
T Consensus 142 ~~~i~H~dlkp~Nil~~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~------~~~~~~sDv~slG~i 215 (283)
T cd05048 142 SHHFVHRDLAARNCLVGEGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILY------GKFTTESDIWSFGVV 215 (283)
T ss_pred hCCeeccccccceEEEcCCCcEEECCCcceeeccccccccccCCCcccccccCHHHhcc------CcCchhhhHHHHHHH
Confidence 99999999999999999999999999999876533221 223456788999998864 346789999999999
Q ss_pred HHHHHh-CCCCCCCchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCC
Q psy3880 141 MYTLLV-GCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCP 219 (408)
Q Consensus 141 l~~ll~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~ 219 (408)
+|+|++ |..||.+.+..+....+..+
T Consensus 216 l~el~~~g~~p~~~~~~~~~~~~i~~~----------------------------------------------------- 242 (283)
T cd05048 216 LWEIFSYGLQPYYGFSNQEVIEMIRSR----------------------------------------------------- 242 (283)
T ss_pred HHHHHcCCCCCCCCCCHHHHHHHHHcC-----------------------------------------------------
Confidence 999997 99998776554443333221
Q ss_pred CCCCchhHHHHHHHHhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcC
Q psy3880 220 PFWHRKQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNH 276 (408)
Q Consensus 220 Pf~~~~~~~~~~~i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~H 276 (408)
... .. -..+++++.+|+++||..||++|||+.|+++|
T Consensus 243 -----------------~~~-~~--~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~ 279 (283)
T cd05048 243 -----------------QLL-PC--PEDCPARVYALMIECWNEIPARRPRFKDIHTR 279 (283)
T ss_pred -----------------CcC-CC--cccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 100 00 12468899999999999999999999999875
No 233
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.96 E-value=3.9e-30 Score=253.20 Aligned_cols=223 Identities=35% Similarity=0.521 Sum_probs=156.6
Q ss_pred ccCCcEEEEec----cCCcHHHHHHHHHhhchhhHHhhh----CCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEE
Q psy3880 8 AHSRVVVRVKE----EGDDLKHLAAQVVDKGEAAVQDII----NSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILL 79 (408)
Q Consensus 8 ~~~~~i~~~~~----~~~~~~~lv~e~~~~g~~~l~~~~----~~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl 79 (408)
.|+|++ .+.. ......|+||||+.+ . |...+ .+...+..++.||+.||+|||++||+||||||+||++
T Consensus 65 ~h~ni~-~~~~~~~~~~~~~~~lv~e~~~~-~--L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill 140 (337)
T cd07852 65 DHPNIV-KLLNVIKAENDKDIYLVFEYMET-D--LHAVIRANILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILL 140 (337)
T ss_pred CCCCcc-ceeeeeccCCCceEEEEeccccc-C--HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE
Confidence 788754 5544 223356899999975 4 65554 3457788899999999999999999999999999999
Q ss_pred ecCCCEEEeccccchhcccCc------ccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCC
Q psy3880 80 DDQMNVKLTDFGFARVLKKGE------KLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH 153 (408)
Q Consensus 80 ~~~~~iKl~DFGla~~~~~~~------~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~ 153 (408)
+.++.+||+|||++..+.... ......||+.|+|||.+... ..++.++|+||+||++|+|++|..||.+
T Consensus 141 ~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-----~~~~~~sDi~slG~~l~el~tg~~pf~~ 215 (337)
T cd07852 141 NSDCRVKLADFGLARSLSELEENPENPVLTDYVATRWYRAPEILLGS-----TRYTKGVDMWSVGCILGEMLLGKPLFPG 215 (337)
T ss_pred cCCCcEEEeeccchhccccccccccCcchhcccccccccCceeeecc-----ccccccchHHHHHHHHHHHHhCCCCCCC
Confidence 999999999999987654322 22335689999999987542 3467899999999999999999999988
Q ss_pred chhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHH
Q psy3880 154 RKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI 233 (408)
Q Consensus 154 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i 233 (408)
........++........ .+.+ ..+.. ++ ...++..+
T Consensus 216 ~~~~~~~~~~~~~~~~~~------------~~~~-----------------~~~~~----------~~----~~~~~~~~ 252 (337)
T cd07852 216 TSTLNQLEKIIEVIGPPS------------AEDI-----------------ESIKS----------PF----AATMLDSL 252 (337)
T ss_pred CChHHHHHHHHHHhCCCC------------HHHH-----------------HHHHh----------hh----HHHhhhhc
Confidence 877766666654321110 0000 00000 00 00011111
Q ss_pred HhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q psy3880 234 MEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPK 282 (408)
Q Consensus 234 ~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~ 282 (408)
..............++.++.+||.+||+.||++|||+.++++||||+..
T Consensus 253 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~~ 301 (337)
T cd07852 253 PSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQF 301 (337)
T ss_pred ccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhChhhhhh
Confidence 1111111111123478899999999999999999999999999999764
No 234
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=99.96 E-value=2e-29 Score=242.53 Aligned_cols=195 Identities=21% Similarity=0.376 Sum_probs=148.4
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhCC---------------HHHHHHHHHHHHHHHHHHHHCCCe
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIINS---------------NPALRYIMRQLFEALEHVHNHSVV 68 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~~---------------~~~~r~i~~qil~aL~~LH~~~Iv 68 (408)
.+.|++++ ++.. ...+..|+||||+.+|. |.+++.. ...+..++.|++.||.|||+++|+
T Consensus 65 ~l~~~~i~-~~~~~~~~~~~~~lv~e~~~~g~--L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~ 141 (288)
T cd05061 65 GFTCHHVV-RLLGVVSKGQPTLVVMELMAHGD--LKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFV 141 (288)
T ss_pred hCCCCCee-eEEEEEcCCCCcEEEEeCCCCCC--HHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 46788755 5543 45567899999999998 8887742 246788999999999999999999
Q ss_pred eccCCCCcEEEecCCCEEEeccccchhcccCccc---ccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHH
Q psy3880 69 HRDLKPENILLDDQMNVKLTDFGFARVLKKGEKL---MDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLL 145 (408)
Q Consensus 69 HRDLKp~NILl~~~~~iKl~DFGla~~~~~~~~~---~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll 145 (408)
||||||+|||++.++.+||+|||+++........ ....++..|+|||.+.. ..++.++|+||+||++|+|+
T Consensus 142 H~dikp~nili~~~~~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~------~~~~~~~DvwslG~~l~el~ 215 (288)
T cd05061 142 HRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKD------GVFTTSSDMWSFGVVLWEIT 215 (288)
T ss_pred CCCCChheEEEcCCCcEEECcCCccccccccccccccCCCcccccccCHHHhcc------CCCChHhHHHHHHHHHHHHH
Confidence 9999999999999999999999998765432211 12345678999999864 34678999999999999999
Q ss_pred h-CCCCCCCchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCc
Q psy3880 146 V-GCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHR 224 (408)
Q Consensus 146 ~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~ 224 (408)
+ |..||.+....+....+..+
T Consensus 216 ~~~~~p~~~~~~~~~~~~~~~~---------------------------------------------------------- 237 (288)
T cd05061 216 SLAEQPYQGLSNEQVLKFVMDG---------------------------------------------------------- 237 (288)
T ss_pred hCCCCCCCCCCHHHHHHHHHcC----------------------------------------------------------
Confidence 8 78888665443333322211
Q ss_pred hhHHHHHHHHhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHc------CCCCCCC
Q psy3880 225 KQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALN------HSFFHPK 282 (408)
Q Consensus 225 ~~~~~~~~i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~------Hpwf~~~ 282 (408)
.... .+ ...+++++++|.+||+.||++|||+.++++ ||||.+.
T Consensus 238 ------------~~~~-~~--~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~~~~~ 286 (288)
T cd05061 238 ------------GYLD-QP--DNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEV 286 (288)
T ss_pred ------------CCCC-CC--CCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCCCCCCC
Confidence 1000 00 134678999999999999999999999987 9999764
No 235
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=99.96 E-value=3.1e-30 Score=243.38 Aligned_cols=194 Identities=30% Similarity=0.509 Sum_probs=147.5
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC-----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEE
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN-----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENIL 78 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~-----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NIL 78 (408)
.+.|+|++ .+.+ ++.+..++|+||+.|+. |.+.+. ++.++..++.||++||.|||++|++|+||||+||+
T Consensus 56 ~l~h~~i~-~~~~~~~~~~~~~lv~e~~~~~~--L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil 132 (258)
T cd05578 56 ELNHPFLV-NLWYSFQDEENMYLVVDLLLGGD--LRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNIL 132 (258)
T ss_pred hCCCCChH-HHHHhhcCCCeEEEEEeCCCCCC--HHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeE
Confidence 56888744 5543 45567899999999998 766653 34788999999999999999999999999999999
Q ss_pred EecCCCEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHH
Q psy3880 79 LDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMV 158 (408)
Q Consensus 79 l~~~~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~ 158 (408)
+++++.++|+|||++.............|+..|+|||.+... .++.++|+||+|+++|+|++|..||...+...
T Consensus 133 ~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~------~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~ 206 (258)
T cd05578 133 LDEQGHVHITDFNIATKVTPDTLTTSTSGTPGYMAPEVLCRQ------GYSVAVDWWSLGVTAYECLRGKRPYRGHSRTI 206 (258)
T ss_pred EcCCCCEEEeecccccccCCCccccccCCChhhcCHHHHccc------CCCCcccchhhHHHHHHHHhCCCCCCCCCccH
Confidence 999999999999998876554334456788899999998642 35677888888888888888887775432100
Q ss_pred HHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCC
Q psy3880 159 MLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKY 238 (408)
Q Consensus 159 ~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~ 238 (408)
...+.........
T Consensus 207 -------------------------------------------------------------------~~~~~~~~~~~~~ 219 (258)
T cd05578 207 -------------------------------------------------------------------RDQIRAKQETADV 219 (258)
T ss_pred -------------------------------------------------------------------HHHHHHHhccccc
Confidence 0111111111111
Q ss_pred CCCCCcCCCCCccHHHHHHHhcccCCCCCCCH--HHHHcCCCC
Q psy3880 239 SFSSPEWNDISEDPKDLIRKLLIVTPEDRYSV--KEALNHSFF 279 (408)
Q Consensus 239 ~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta--~e~L~Hpwf 279 (408)
.+ ...++.++.++|++||..||.+|+|+ +|+++||||
T Consensus 220 ~~----~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~~~~~ 258 (258)
T cd05578 220 LY----PATWSTEAIDAINKLLERDPQKRLGDNLKDLKNHPYF 258 (258)
T ss_pred cC----cccCcHHHHHHHHHHccCChhHcCCccHHHHhcCCCC
Confidence 11 13467899999999999999999999 999999998
No 236
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=99.96 E-value=3.9e-29 Score=242.79 Aligned_cols=199 Identities=29% Similarity=0.461 Sum_probs=149.9
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhh---hCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEe
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDI---INSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLD 80 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~---~~~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl~ 80 (408)
.+.|+|++ .+.. ..++..|+|+||+.|+...+... -.+..++..++.|++.||.|||++||+||||+|+||+++
T Consensus 71 ~l~h~niv-~~~~~~~~~~~~~lv~e~~~g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~ 149 (307)
T cd06607 71 QLRHPNTI-EYKGCYLREHTAWLVMEYCLGSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLT 149 (307)
T ss_pred hCCCCCEE-EEEEEEEeCCeEEEEHHhhCCCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEC
Confidence 46788855 5443 45567789999998653222221 124578899999999999999999999999999999999
Q ss_pred cCCCEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHHHH
Q psy3880 81 DQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVML 160 (408)
Q Consensus 81 ~~~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~~~ 160 (408)
+++.+||+|||++...... ....+++.|+|||++... ....++.++|+||+||++|+|++|..||.+.+.....
T Consensus 150 ~~~~~kL~dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~---~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~ 223 (307)
T cd06607 150 EPGTVKLADFGSASLVSPA---NSFVGTPYWMAPEVILAM---DEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSAL 223 (307)
T ss_pred CCCCEEEeecCcceecCCC---CCccCCccccCceeeecc---CCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHH
Confidence 9999999999998765432 245788899999987431 1234778999999999999999999999776544433
Q ss_pred HHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCCCC
Q psy3880 161 RNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240 (408)
Q Consensus 161 ~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~~f 240 (408)
..+.... +| ..
T Consensus 224 ~~~~~~~---------------------------------------------------~~------------------~~ 234 (307)
T cd06607 224 YHIAQND---------------------------------------------------SP------------------TL 234 (307)
T ss_pred HHHhcCC---------------------------------------------------CC------------------CC
Confidence 3221110 00 01
Q ss_pred CCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCCC
Q psy3880 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKL 283 (408)
Q Consensus 241 ~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~~ 283 (408)
.. ...+.++++||.+||..||++|||+.+++.||||....
T Consensus 235 ~~---~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 274 (307)
T cd06607 235 SS---NDWSDYFRNFVDSCLQKIPQDRPSSEELLKHRFVLRER 274 (307)
T ss_pred Cc---hhhCHHHHHHHHHHhcCChhhCcCHHHHhcChhhcccC
Confidence 01 12467899999999999999999999999999998653
No 237
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=99.96 E-value=7.8e-30 Score=243.20 Aligned_cols=195 Identities=26% Similarity=0.464 Sum_probs=149.0
Q ss_pred ccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEec
Q psy3880 8 AHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDD 81 (408)
Q Consensus 8 ~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl~~ 81 (408)
.|++++ .+.+ +.++..++||||+.||. |.+.+. +...+..++.|++.||.|||+.||+|+||+|+||+++.
T Consensus 60 ~~~~vi-~~~~~~~~~~~~~lv~e~~~~~~--L~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~ 136 (277)
T cd06917 60 QPPNIT-KYYGSYLKGPRLWIIMEYAEGGS--VRTLMKAGPIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTN 136 (277)
T ss_pred CCCCee-eEeeeeeeCCEEEEEEecCCCCc--HHHHHHccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcC
Confidence 488765 4443 44556789999999997 766653 34788999999999999999999999999999999999
Q ss_pred CCCEEEeccccchhcccCcc-cccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHHHH
Q psy3880 82 QMNVKLTDFGFARVLKKGEK-LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVML 160 (408)
Q Consensus 82 ~~~iKl~DFGla~~~~~~~~-~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~~~ 160 (408)
++.++|+|||++..+..... .....|+..|+|||.+... ..++.++|+||+||++|+|++|..||.+.......
T Consensus 137 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-----~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~ 211 (277)
T cd06917 137 TGNVKLCDFGVAALLNQNSSKRSTFVGTPYWMAPEVITEG-----KYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAM 211 (277)
T ss_pred CCCEEEccCCceeecCCCccccccccCCcceeCHHHhccC-----CccccchhHHHHHHHHHHHHhCCCCCCCCChhhhh
Confidence 99999999999877654332 2345789999999998542 34678999999999999999999998654322111
Q ss_pred HHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCCCC
Q psy3880 161 RNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240 (408)
Q Consensus 161 ~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~~f 240 (408)
..+.. ..+
T Consensus 212 ~~~~~---------------------------------------------------~~~--------------------- 219 (277)
T cd06917 212 MLIPK---------------------------------------------------SKP--------------------- 219 (277)
T ss_pred hcccc---------------------------------------------------CCC---------------------
Confidence 10000 000
Q ss_pred CCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q psy3880 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPK 282 (408)
Q Consensus 241 ~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~ 282 (408)
+...+...+.++.++|.+||..||++|||+.|+++||||...
T Consensus 220 ~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~~~~~~~ 261 (277)
T cd06917 220 PRLEDNGYSKLLREFVAACLDEEPKERLSAEELLKSKWIKAH 261 (277)
T ss_pred CCCCcccCCHHHHHHHHHHcCCCcccCcCHHHHhhChHhhcc
Confidence 001112367889999999999999999999999999999764
No 238
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=99.96 E-value=1e-29 Score=239.51 Aligned_cols=189 Identities=28% Similarity=0.469 Sum_probs=148.0
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC-------CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCc
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN-------SNPALRYIMRQLFEALEHVHNHSVVHRDLKPEN 76 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~-------~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~N 76 (408)
.+.|+|++ .+.+ ++++..|+|+||+.+|. |.+.+. +++.+..++.|++.||.|||++||+|+||||+|
T Consensus 54 ~l~h~~i~-~~~~~~~~~~~~~lv~e~~~~~~--l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~n 130 (255)
T cd08219 54 KMKHPNIV-AFKESFEADGHLYIVMEYCDGGD--LMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKN 130 (255)
T ss_pred hCCCCCcc-eEEEEEEECCEEEEEEeeCCCCc--HHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcce
Confidence 46798865 4443 55667899999999998 766542 457888999999999999999999999999999
Q ss_pred EEEecCCCEEEeccccchhcccCcc-cccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCch
Q psy3880 77 ILLDDQMNVKLTDFGFARVLKKGEK-LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRK 155 (408)
Q Consensus 77 ILl~~~~~iKl~DFGla~~~~~~~~-~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~ 155 (408)
|++++++.++++|||++........ .....|++.|+|||++.+ ..++.++|+||+|+++|+|++|..||...+
T Consensus 131 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~------~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~ 204 (255)
T cd08219 131 IFLTQNGKVKLGDFGSARLLTSPGAYACTYVGTPYYVPPEIWEN------MPYNNKSDIWSLGCILYELCTLKHPFQANS 204 (255)
T ss_pred EEECCCCcEEEcccCcceeecccccccccccCCccccCHHHHcc------CCcCchhhhhhhchhheehhhccCCCCCCC
Confidence 9999999999999999876643222 234678899999999864 346789999999999999999999997655
Q ss_pred hHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHh
Q psy3880 156 QMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIME 235 (408)
Q Consensus 156 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~ 235 (408)
.......+..+.
T Consensus 205 ~~~~~~~~~~~~-------------------------------------------------------------------- 216 (255)
T cd08219 205 WKNLILKVCQGS-------------------------------------------------------------------- 216 (255)
T ss_pred HHHHHHHHhcCC--------------------------------------------------------------------
Confidence 443333332221
Q ss_pred cCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcC
Q psy3880 236 GKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNH 276 (408)
Q Consensus 236 ~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~H 276 (408)
+.. ....++.++++||.+||..||++|||+.|+++-
T Consensus 217 --~~~---~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 217 --YKP---LPSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred --CCC---CCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 110 012357789999999999999999999999863
No 239
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=99.96 E-value=8.8e-30 Score=243.75 Aligned_cols=224 Identities=32% Similarity=0.466 Sum_probs=156.4
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhh-----CCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEE
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDII-----NSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENIL 78 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~-----~~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NIL 78 (408)
.+.|++++ .+.+ ..++..++|+||+.++. +.... .+..++..++.||+.||.|||+++++||||+|+||+
T Consensus 56 ~l~~~~i~-~~~~~~~~~~~~~iv~e~~~~~~--l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~ 132 (288)
T cd07833 56 QLRHENIV-NLKEAFRRKGRLYLVFEYVERTL--LELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENIL 132 (288)
T ss_pred hcCCCCee-ehhheEEECCEEEEEEecCCCCH--HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeE
Confidence 46788754 5554 33456789999999876 44333 235788999999999999999999999999999999
Q ss_pred EecCCCEEEeccccchhcccCc--ccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchh
Q psy3880 79 LDDQMNVKLTDFGFARVLKKGE--KLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQ 156 (408)
Q Consensus 79 l~~~~~iKl~DFGla~~~~~~~--~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~ 156 (408)
+++++.+||+|||++....... ......+++.|+|||++... ..++.++|+||+|+++|+|++|.+||.+.+.
T Consensus 133 ~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~-----~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~ 207 (288)
T cd07833 133 VSESGVLKLCDFGFARALRARPASPLTDYVATRWYRAPELLVGD-----TNYGKPVDVWAIGCIMAELLDGEPLFPGDSD 207 (288)
T ss_pred ECCCCCEEEEeeecccccCCCccccccCcccccCCcCCchhcCC-----CCcCchhhHHHHHHHHHHHHhCCCCCCCCCH
Confidence 9999999999999988765443 23346788999999998642 2577899999999999999999999988776
Q ss_pred HHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhc
Q psy3880 157 MVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEG 236 (408)
Q Consensus 157 ~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~ 236 (408)
.+.+..+.........+..... ..+-+..+. ..|-. ........
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~--------~~~~~--~~~~~~~~---- 251 (288)
T cd07833 208 IDQLYLIQKCLGPLPPSHQELF----------------------SSNPRFAGV--------AFPEP--SQPESLER---- 251 (288)
T ss_pred HHHHHHHHHHhCCCCHHHhhhc----------------------ccCcccccc--------ccCCC--CCcHHHHH----
Confidence 6555554432222111100000 000000000 00000 00000000
Q ss_pred CCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q psy3880 237 KYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFF 279 (408)
Q Consensus 237 ~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf 279 (408)
.+ -..+++++++||++||..||++|||++++++||||
T Consensus 252 --~~----~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~f 288 (288)
T cd07833 252 --RY----PGKVSSPALDFLKACLRMDPKERLTCDELLQHPYF 288 (288)
T ss_pred --hc----CCccchHHHHHHHHHhccCchhcccHHHHhcCCCC
Confidence 00 02358899999999999999999999999999998
No 240
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=99.96 E-value=3.4e-29 Score=250.85 Aligned_cols=103 Identities=25% Similarity=0.477 Sum_probs=85.5
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEecCCCEEEeccccchhcccCcccc---cCCCCCcccChhhhhhccc
Q psy3880 46 PALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLM---DLCGTPGYLAPEVLRANMF 122 (408)
Q Consensus 46 ~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl~~~~~iKl~DFGla~~~~~~~~~~---~~~gt~~y~aPE~l~~~~~ 122 (408)
+.+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++.......... ...++..|+|||++..
T Consensus 214 ~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--- 290 (375)
T cd05104 214 EDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYVVKGNARLPVKWMAPESIFN--- 290 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCCcEEEecCccceeccCcccccccCCCCCCcceeChhHhcC---
Confidence 4567889999999999999999999999999999999999999999997654332211 2334567999999864
Q ss_pred cCcCCCCcchhhhhhhHHHHHHHh-CCCCCCCc
Q psy3880 123 EDATGYGQAVDVWACGVIMYTLLV-GCPPFWHR 154 (408)
Q Consensus 123 ~~~~~~~~~~DiwSlGvil~~ll~-G~~pf~~~ 154 (408)
..++.++|+|||||++|+|++ |..||...
T Consensus 291 ---~~~~~~sDi~slG~~l~ellt~g~~p~~~~ 320 (375)
T cd05104 291 ---CVYTFESDVWSYGILLWEIFSLGSSPYPGM 320 (375)
T ss_pred ---CCCCCCCCHHHHHHHHHHHHhcCCCCCCCC
Confidence 357889999999999999997 88888654
No 241
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=99.96 E-value=1.8e-29 Score=239.83 Aligned_cols=190 Identities=21% Similarity=0.329 Sum_probs=142.7
Q ss_pred ccccCCcEEEEecc-------CCcHHHHHHHHHhhchhhHHhhh-----------CCHHHHHHHHHHHHHHHHHHHHCCC
Q psy3880 6 MVAHSRVVVRVKEE-------GDDLKHLAAQVVDKGEAAVQDII-----------NSNPALRYIMRQLFEALEHVHNHSV 67 (408)
Q Consensus 6 ~~~~~~~i~~~~~~-------~~~~~~lv~e~~~~g~~~l~~~~-----------~~~~~~r~i~~qil~aL~~LH~~~I 67 (408)
.+.|+|++..+... .....++++||+.+|+ |.+.+ .+...+..++.||+.||+|||+++|
T Consensus 56 ~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~--l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i 133 (272)
T cd05075 56 EFDHPNVMRLIGVCLQTVESEGYPSPVVILPFMKHGD--LHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSF 133 (272)
T ss_pred hCCCCCcceEEEEEccCCcccCCCCcEEEEEeCCCCc--HHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 46899866433211 1234679999999998 66554 2347788999999999999999999
Q ss_pred eeccCCCCcEEEecCCCEEEeccccchhcccCccc---ccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHH
Q psy3880 68 VHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKL---MDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTL 144 (408)
Q Consensus 68 vHRDLKp~NILl~~~~~iKl~DFGla~~~~~~~~~---~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~l 144 (408)
+||||||+|||++.++.+||+|||+++.+...... ....+++.|+|||.+.. ..++.++|+||+||++|+|
T Consensus 134 ~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~------~~~~~~~Di~slG~il~el 207 (272)
T cd05075 134 IHRDLAARNCMLNENMNVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLAD------RVYTTKSDVWSFGVTMWEI 207 (272)
T ss_pred eccccchhheEEcCCCCEEECCCCcccccCcccceecCCcccCCcccCCHHHccC------CCcChHHHHHHHHHHHHHH
Confidence 99999999999999999999999999876543221 12345678999998864 4578899999999999999
Q ss_pred Hh-CCCCCCCchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCC
Q psy3880 145 LV-GCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH 223 (408)
Q Consensus 145 l~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~ 223 (408)
++ |..||.+.........+..+
T Consensus 208 ~~~g~~p~~~~~~~~~~~~~~~~--------------------------------------------------------- 230 (272)
T cd05075 208 ATRGQTPYPGVENSEIYDYLRQG--------------------------------------------------------- 230 (272)
T ss_pred HcCCCCCCCCCCHHHHHHHHHcC---------------------------------------------------------
Confidence 98 78888665443333322211
Q ss_pred chhHHHHHHHHhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcC
Q psy3880 224 RKQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNH 276 (408)
Q Consensus 224 ~~~~~~~~~i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~H 276 (408)
... +....++++++++|.+||..||++|||+.+++++
T Consensus 231 -------------~~~---~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 267 (272)
T cd05075 231 -------------NRL---KQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCE 267 (272)
T ss_pred -------------CCC---CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 100 0112457789999999999999999999999864
No 242
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=99.96 E-value=1.2e-29 Score=238.46 Aligned_cols=192 Identities=30% Similarity=0.522 Sum_probs=149.4
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC-------CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCc
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN-------SNPALRYIMRQLFEALEHVHNHSVVHRDLKPEN 76 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~-------~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~N 76 (408)
.+.|+|++ .+.+ +.++..|+|+||+.++. |.+.+. ++..+..++.|++.||.|||+++++|+||||+|
T Consensus 55 ~~~h~~i~-~~~~~~~~~~~~~lv~e~~~~~~--L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~n 131 (257)
T cd08225 55 KMKHPNIV-TFFASFQENGRLFIVMEYCDGGD--LMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQN 131 (257)
T ss_pred hCCCCChh-hhhheeccCCeEEEEEecCCCCc--HHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHH
Confidence 45788755 5544 45566799999999998 777653 457889999999999999999999999999999
Q ss_pred EEEecCC-CEEEeccccchhcccCccc-ccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCc
Q psy3880 77 ILLDDQM-NVKLTDFGFARVLKKGEKL-MDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHR 154 (408)
Q Consensus 77 ILl~~~~-~iKl~DFGla~~~~~~~~~-~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~ 154 (408)
|++++++ .+||+|||.+......... ....|++.|+|||.+.. ..++.++|+||+||+++++++|..||...
T Consensus 132 il~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~------~~~~~~~Dv~slG~il~~l~~g~~p~~~~ 205 (257)
T cd08225 132 IFLSKNGMVAKLGDFGIARQLNDSMELAYTCVGTPYYLSPEICQN------RPYNNKTDIWSLGCVLYELCTLKHPFEGN 205 (257)
T ss_pred EEEcCCCCeEEecccccchhccCCcccccccCCCccccCHHHHcC------CCCCchhhHHHHHHHHHHHHhCCCCCCCc
Confidence 9998876 4699999999876543322 23568899999998754 34678999999999999999999999765
Q ss_pred hhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHH
Q psy3880 155 KQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIM 234 (408)
Q Consensus 155 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~ 234 (408)
+.......+..+.
T Consensus 206 ~~~~~~~~~~~~~------------------------------------------------------------------- 218 (257)
T cd08225 206 NLHQLVLKICQGY------------------------------------------------------------------- 218 (257)
T ss_pred cHHHHHHHHhccc-------------------------------------------------------------------
Confidence 5433333222110
Q ss_pred hcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q psy3880 235 EGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFF 279 (408)
Q Consensus 235 ~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf 279 (408)
.. +.-..++.+++++|.+||..||++|||+.|+++||||
T Consensus 219 ---~~---~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~~~~ 257 (257)
T cd08225 219 ---FA---PISPNFSRDLRSLISQLFKVSPRDRPSITSILKRPFL 257 (257)
T ss_pred ---CC---CCCCCCCHHHHHHHHHHhccChhhCcCHHHHhhCCCC
Confidence 00 0012457789999999999999999999999999997
No 243
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.96 E-value=1.2e-29 Score=242.38 Aligned_cols=218 Identities=31% Similarity=0.487 Sum_probs=157.0
Q ss_pred cCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC-------CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEE
Q psy3880 9 HSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN-------SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILL 79 (408)
Q Consensus 9 ~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~-------~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl 79 (408)
|++++ .+.. +.++..|+||||+ +|. |.+.+. +..++..++.|++.||.|||++|++|+||+|+||++
T Consensus 57 h~~i~-~~~~~~~~~~~~~lv~e~~-~~~--l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i 132 (283)
T cd07830 57 HPNIV-KLKEVFRENDELYFVFEYM-EGN--LYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLV 132 (283)
T ss_pred CCCch-hHHHHhhcCCcEEEEEecC-CCC--HHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEE
Confidence 77744 5554 4466789999999 665 555432 457889999999999999999999999999999999
Q ss_pred ecCCCEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHHH
Q psy3880 80 DDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVM 159 (408)
Q Consensus 80 ~~~~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~~ 159 (408)
+.++.++|+|||++.............++..|+|||++... ..++.++|+||+|+++++|++|++||...+....
T Consensus 133 ~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-----~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~ 207 (283)
T cd07830 133 SGPEVVKIADFGLAREIRSRPPYTDYVSTRWYRAPEILLRS-----TSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQ 207 (283)
T ss_pred cCCCCEEEeecccceeccCCCCcCCCCCcccccCceeeecC-----cCcCCccchhhHHHHHHHHHhCCCccCCCChHHH
Confidence 99999999999999876554444456788999999987542 3467899999999999999999999988887777
Q ss_pred HHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCCC
Q psy3880 160 LRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYS 239 (408)
Q Consensus 160 ~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~~ 239 (408)
+.++......... +.|.-+.-+........|..... . +
T Consensus 208 ~~~~~~~~~~~~~------------------------------~~~~~~~~~~~~~~~~~~~~~~~--~-~--------- 245 (283)
T cd07830 208 LYKICSVLGTPTK------------------------------QDWPEGYKLASKLGFRFPQFAPT--S-L--------- 245 (283)
T ss_pred HHHHHHhcCCCCh------------------------------hhhhhHhhhhccccccccccccc--c-H---------
Confidence 6666553222211 12221111110000000000000 0 0
Q ss_pred CCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q psy3880 240 FSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFF 279 (408)
Q Consensus 240 f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf 279 (408)
.......++++++||++||+.||++|||++|++.||||
T Consensus 246 --~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~~~~ 283 (283)
T cd07830 246 --HQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHPYF 283 (283)
T ss_pred --HHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhCCCC
Confidence 00112347889999999999999999999999999998
No 244
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.96 E-value=6.1e-30 Score=250.64 Aligned_cols=226 Identities=27% Similarity=0.458 Sum_probs=160.3
Q ss_pred ccccCCcEEEEecc--CC-----cHHHHHHHHHhhchhhHHhhhC-----CHHHHHHHHHHHHHHHHHHHHCCCeeccCC
Q psy3880 6 MVAHSRVVVRVKEE--GD-----DLKHLAAQVVDKGEAAVQDIIN-----SNPALRYIMRQLFEALEHVHNHSVVHRDLK 73 (408)
Q Consensus 6 ~~~~~~~i~~~~~~--~~-----~~~~lv~e~~~~g~~~l~~~~~-----~~~~~r~i~~qil~aL~~LH~~~IvHRDLK 73 (408)
.+.|++++ .+.+. .. ...|+||||+.+ . |.+.+. +...+..++.||+.||+|||++||+|||||
T Consensus 55 ~l~~~~i~-~~~~~~~~~~~~~~~~~~lv~e~~~~-~--l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlk 130 (330)
T cd07834 55 HLRHENII-GLLDILRPPSPEDFNDVYIVTELMET-D--LHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLK 130 (330)
T ss_pred hcCCcchh-hhhhhhcccCcccccceEEEecchhh-h--HHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCC
Confidence 35688754 44431 11 256899999985 3 555543 457889999999999999999999999999
Q ss_pred CCcEEEecCCCEEEeccccchhcccCc----ccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCC
Q psy3880 74 PENILLDDQMNVKLTDFGFARVLKKGE----KLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCP 149 (408)
Q Consensus 74 p~NILl~~~~~iKl~DFGla~~~~~~~----~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~ 149 (408)
|+|||++.++.++|+|||++....... ......+++.|+|||.+... ..++.++|+||+||++|+|++|.+
T Consensus 131 p~nili~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-----~~~~~~sDi~slG~il~~l~~g~~ 205 (330)
T cd07834 131 PSNILVNSNCDLKICDFGLARGVDPDEDEKGFLTEYVVTRWYRAPELLLSS-----SRYTKAIDIWSVGCIFAELLTRKP 205 (330)
T ss_pred HHHEEEcCCCCEEEcccCceEeecccccccccccccccccCcCCceeeecc-----cCCCcchhHHHHHHHHHHHHcCCC
Confidence 999999999999999999998765442 23446788999999998652 257889999999999999999999
Q ss_pred CCCCchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHH
Q psy3880 150 PFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVM 229 (408)
Q Consensus 150 pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~ 229 (408)
||.+.+....+..+...........+.......+.+ .+.+..+.....
T Consensus 206 pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~~~~~---- 253 (330)
T cd07834 206 LFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEKARN----------------------------YLKSLPKKPKKP---- 253 (330)
T ss_pred CcCCCCHHHHHHHHHHhcCCCChhHhhhccccchhh----------------------------HHhhcccCCcch----
Confidence 999998887777776543222211111000000000 000000000000
Q ss_pred HHHHHhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCCC
Q psy3880 230 LRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKL 283 (408)
Q Consensus 230 ~~~i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~~ 283 (408)
. ......+++++.+||.+||..||.+|||++++|+||||....
T Consensus 254 ~-----------~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~ 296 (330)
T cd07834 254 L-----------SKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLH 296 (330)
T ss_pred h-----------HHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhc
Confidence 0 001134788999999999999999999999999999997643
No 245
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=99.96 E-value=9e-30 Score=243.36 Aligned_cols=195 Identities=27% Similarity=0.430 Sum_probs=150.3
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEE
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILL 79 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl 79 (408)
.+.|++++ .+.+ .+++..++||||+.||. |.+.+. +..++..++.|++.||+|||+++++|+||+|+||++
T Consensus 58 ~l~h~~i~-~~~~~~~~~~~~~lv~e~~~~~~--L~~~i~~~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~ 134 (277)
T cd06640 58 QCDSPYVT-KYYGSYLKGTKLWIIMEYLGGGS--ALDLLRAGPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLL 134 (277)
T ss_pred hCCCCCEe-eEEEEEEECCEEEEEEecCCCCc--HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEE
Confidence 46788755 5444 45567899999999998 887764 347788899999999999999999999999999999
Q ss_pred ecCCCEEEeccccchhcccCcc-cccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHH
Q psy3880 80 DDQMNVKLTDFGFARVLKKGEK-LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMV 158 (408)
Q Consensus 80 ~~~~~iKl~DFGla~~~~~~~~-~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~ 158 (408)
+.++.++|+|||++........ .....++..|+|||++.. ..++.++|+||+||++|+|++|..||...+...
T Consensus 135 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~apE~~~~------~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~ 208 (277)
T cd06640 135 SEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQ------SAYDSKADIWSLGITAIELAKGEPPNSDMHPMR 208 (277)
T ss_pred cCCCCEEEcccccceeccCCccccccccCcccccCHhHhcc------CCCccHHHHHHHHHHHHHHHHCCCCCCCcChHh
Confidence 9999999999999876544321 223568889999999864 346778999999999999999999986543322
Q ss_pred HHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCC
Q psy3880 159 MLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKY 238 (408)
Q Consensus 159 ~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~ 238 (408)
....+. .+.+|
T Consensus 209 ~~~~~~---------------------------------------------------~~~~~------------------ 219 (277)
T cd06640 209 VLFLIP---------------------------------------------------KNNPP------------------ 219 (277)
T ss_pred Hhhhhh---------------------------------------------------cCCCC------------------
Confidence 111110 00011
Q ss_pred CCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q psy3880 239 SFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPK 282 (408)
Q Consensus 239 ~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~ 282 (408)
.....++.++.+||.+||..||++|||++++++||||...
T Consensus 220 ----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 259 (277)
T cd06640 220 ----TLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKHKFIVKN 259 (277)
T ss_pred ----CCchhhhHHHHHHHHHHcccCcccCcCHHHHHhChHhhhc
Confidence 0112356788999999999999999999999999999664
No 246
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=99.96 E-value=2.4e-29 Score=241.96 Aligned_cols=188 Identities=19% Similarity=0.344 Sum_probs=145.6
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC------------------CHHHHHHHHHHHHHHHHHHHHC
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN------------------SNPALRYIMRQLFEALEHVHNH 65 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~------------------~~~~~r~i~~qil~aL~~LH~~ 65 (408)
.+.|++++ ++.+ ...+..++|+||+.+|. |.+.+. +...+..++.|++.||+|||++
T Consensus 63 ~l~h~~i~-~~~~~~~~~~~~~lv~e~~~~~~--L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~ 139 (288)
T cd05093 63 NLQHEHIV-KFYGVCVEGDPLIMVFEYMKHGD--LNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ 139 (288)
T ss_pred hCCCCCcc-eEEEEEecCCccEEEEEcCCCCC--HHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 46798755 5543 45577899999999998 777663 4468889999999999999999
Q ss_pred CCeeccCCCCcEEEecCCCEEEeccccchhcccCcc---cccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHH
Q psy3880 66 SVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEK---LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMY 142 (408)
Q Consensus 66 ~IvHRDLKp~NILl~~~~~iKl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~ 142 (408)
|++||||||+|||+++++.+||+|||++........ .....+++.|+|||.+.. ..++.++|+|||||++|
T Consensus 140 ~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~------~~~~~~sDiwslG~il~ 213 (288)
T cd05093 140 HFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMY------RKFTTESDVWSLGVVLW 213 (288)
T ss_pred CeeecccCcceEEEccCCcEEeccCCccccccCCceeecCCCCCccccccCHHHhcc------CCCCchhhHHHHHHHHH
Confidence 999999999999999999999999999876543221 112345778999998864 35678999999999999
Q ss_pred HHHh-CCCCCCCchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCC
Q psy3880 143 TLLV-GCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 221 (408)
Q Consensus 143 ~ll~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf 221 (408)
+|++ |..||...+....+..+..+
T Consensus 214 ~l~t~g~~p~~~~~~~~~~~~i~~~------------------------------------------------------- 238 (288)
T cd05093 214 EIFTYGKQPWYQLSNNEVIECITQG------------------------------------------------------- 238 (288)
T ss_pred HHHhCCCCCCCCCCHHHHHHHHHcC-------------------------------------------------------
Confidence 9998 88888765544444443322
Q ss_pred CCchhHHHHHHHHhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHc
Q psy3880 222 WHRKQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALN 275 (408)
Q Consensus 222 ~~~~~~~~~~~i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~ 275 (408)
.... .-...+.++++||.+||+.||.+|||++|++.
T Consensus 239 ---------------~~~~---~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~ 274 (288)
T cd05093 239 ---------------RVLQ---RPRTCPKEVYDLMLGCWQREPHMRLNIKEIHS 274 (288)
T ss_pred ---------------CcCC---CCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 1100 01235778999999999999999999999854
No 247
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.96 E-value=1.5e-29 Score=250.11 Aligned_cols=223 Identities=24% Similarity=0.412 Sum_probs=156.7
Q ss_pred ccccCCcEEEEecc---CCc-----HHHHHHHHHhhchhhHHhhhC----CHHHHHHHHHHHHHHHHHHHHCCCeeccCC
Q psy3880 6 MVAHSRVVVRVKEE---GDD-----LKHLAAQVVDKGEAAVQDIIN----SNPALRYIMRQLFEALEHVHNHSVVHRDLK 73 (408)
Q Consensus 6 ~~~~~~~i~~~~~~---~~~-----~~~lv~e~~~~g~~~l~~~~~----~~~~~r~i~~qil~aL~~LH~~~IvHRDLK 73 (408)
.+.|+|++ .+.+. +.. ..++|+|++ |+. |.+.+. +...++.++.||+.||+|||++||+|||||
T Consensus 70 ~l~h~~iv-~~~~~~~~~~~~~~~~~~~lv~e~~-~~~--l~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlk 145 (343)
T cd07880 70 HMKHENVI-GLLDVFTPDLSLDRFHDFYLVMPFM-GTD--LGKLMKHEKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLK 145 (343)
T ss_pred hcCCCCcc-ceeeeecCCccccccceEEEEEecC-CCC--HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCC
Confidence 46788855 44432 111 237899998 555 655543 458899999999999999999999999999
Q ss_pred CCcEEEecCCCEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCC
Q psy3880 74 PENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH 153 (408)
Q Consensus 74 p~NILl~~~~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~ 153 (408)
|+||+++.++.+||+|||++...... .....+++.|+|||.+... ..++.++|+||+||++|++++|..||.+
T Consensus 146 p~Nill~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~y~aPE~~~~~-----~~~~~~~Di~slG~ll~~l~~g~~pf~~ 218 (343)
T cd07880 146 PGNLAVNEDCELKILDFGLARQTDSE--MTGYVVTRWYRAPEVILNW-----MHYTQTVDIWSVGCIMAEMLTGKPLFKG 218 (343)
T ss_pred HHHEEEcCCCCEEEeecccccccccC--ccccccCCcccCHHHHhCC-----CCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 99999999999999999998765432 2345778999999998642 3467899999999999999999999998
Q ss_pred chhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHH
Q psy3880 154 RKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI 233 (408)
Q Consensus 154 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i 233 (408)
.+......+++...... |+.+..... ..+. .......+.+... .+
T Consensus 219 ~~~~~~~~~~~~~~~~~-------------~~~~~~~~~--------~~~~-------~~~~~~~~~~~~~----~~--- 263 (343)
T cd07880 219 HDHLDQLMEIMKVTGTP-------------SKEFVQKLQ--------SEDA-------KNYVKKLPRFRKK----DF--- 263 (343)
T ss_pred CCHHHHHHHHHHhcCCC-------------CHHHHHhhc--------chhH-------HHHHHhccccCcc----hH---
Confidence 87766666665432211 111110000 0000 0000000111000 00
Q ss_pred HhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q psy3880 234 MEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPK 282 (408)
Q Consensus 234 ~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~ 282 (408)
...+..+++++.+||.+||..||++|||+.++++||||+..
T Consensus 264 --------~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~ 304 (343)
T cd07880 264 --------RSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEF 304 (343)
T ss_pred --------HHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhhh
Confidence 01134678899999999999999999999999999999864
No 248
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=99.96 E-value=5.4e-30 Score=244.71 Aligned_cols=194 Identities=27% Similarity=0.449 Sum_probs=149.9
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEE
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILL 79 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl 79 (408)
.+.|+|++ .+.. ..++..|+|+||+.+|. |.+.+. ++..++.++.|++.||.|||++|++|+||+|+||++
T Consensus 58 ~l~h~~i~-~~~~~~~~~~~~~lv~e~~~~~~--L~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i 134 (277)
T cd06642 58 QCDSPYIT-RYYGSYLKGTKLWIIMEYLGGGS--ALDLLKPGPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLL 134 (277)
T ss_pred cCCCCccH-hhhcccccCCceEEEEEccCCCc--HHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEE
Confidence 46788755 4443 45667899999999998 777663 457889999999999999999999999999999999
Q ss_pred ecCCCEEEeccccchhcccCcc-cccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHH
Q psy3880 80 DDQMNVKLTDFGFARVLKKGEK-LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMV 158 (408)
Q Consensus 80 ~~~~~iKl~DFGla~~~~~~~~-~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~ 158 (408)
+.++.++++|||++..+..... .....|+..|+|||.+.. ..++.++|+||+||++|+|++|..||.......
T Consensus 135 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~ 208 (277)
T cd06642 135 SEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQ------SAYDFKADIWSLGITAIELAKGEPPNSDLHPMR 208 (277)
T ss_pred eCCCCEEEccccccccccCcchhhhcccCcccccCHHHhCc------CCCchhhhHHHHHHHHHHHHhCCCCCcccchhh
Confidence 9999999999999876654321 123568889999999864 346789999999999999999999985432211
Q ss_pred HHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCC
Q psy3880 159 MLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKY 238 (408)
Q Consensus 159 ~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~ 238 (408)
....+ ..+.+|
T Consensus 209 ~~~~~---------------------------------------------------~~~~~~------------------ 219 (277)
T cd06642 209 VLFLI---------------------------------------------------PKNSPP------------------ 219 (277)
T ss_pred HHhhh---------------------------------------------------hcCCCC------------------
Confidence 11110 000001
Q ss_pred CCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCC
Q psy3880 239 SFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHP 281 (408)
Q Consensus 239 ~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~ 281 (408)
.. -...+.++.+||.+||..||++|||+.++++||||..
T Consensus 220 ~~----~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~ 258 (277)
T cd06642 220 TL----EGQYSKPFKEFVEACLNKDPRFRPTAKELLKHKFITR 258 (277)
T ss_pred CC----CcccCHHHHHHHHHHccCCcccCcCHHHHHHhHHHHH
Confidence 00 0135778999999999999999999999999999864
No 249
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.96 E-value=5e-30 Score=241.43 Aligned_cols=194 Identities=35% Similarity=0.637 Sum_probs=144.0
Q ss_pred cccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC-----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEE
Q psy3880 7 VAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN-----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILL 79 (408)
Q Consensus 7 ~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~-----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl 79 (408)
+.|+|++ ++.+ +..+..|+++|++.||. |.+.+. ++..+..++.||+.||+|||++|++|+||+|+||++
T Consensus 50 ~~h~~i~-~~~~~~~~~~~~~lv~e~~~~~~--L~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~ 126 (265)
T cd05579 50 AQSPYVV-KLYYSFQGKKNLYLVMEYLPGGD--LASLLENVGSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILI 126 (265)
T ss_pred CCCcchh-HHHHheecCcEEEEEEecCCCCc--HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEE
Confidence 5688755 4443 44566789999999987 766543 457888999999999999999999999999999999
Q ss_pred ecCCCEEEeccccchhcccCc---------ccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCC
Q psy3880 80 DDQMNVKLTDFGFARVLKKGE---------KLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPP 150 (408)
Q Consensus 80 ~~~~~iKl~DFGla~~~~~~~---------~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~p 150 (408)
+.++.++|+|||++....... ......+++.|+|||.+... .++.++|+||+|+++|++++|..|
T Consensus 127 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~------~~~~~~Dv~slG~~~~~l~~g~~p 200 (265)
T cd05579 127 DSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVILGQ------GHSKTVDWWSLGCILYEFLVGIPP 200 (265)
T ss_pred cCCCCEEEEecccchhcccCcccccccccccccCcccCccccCHHHhcCC------CCCcchhhHHHHHHHHHHHhCCCC
Confidence 999999999999987643321 11235677889999987542 245667777777777777777666
Q ss_pred CCCchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHH
Q psy3880 151 FWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVML 230 (408)
Q Consensus 151 f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~ 230 (408)
|... ......
T Consensus 201 ~~~~----------------------------------------------------------------------~~~~~~ 210 (265)
T cd05579 201 FHGE----------------------------------------------------------------------TPEEIF 210 (265)
T ss_pred CCCC----------------------------------------------------------------------CHHHHH
Confidence 6433 222333
Q ss_pred HHHHhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCH---HHHHcCCCCCC
Q psy3880 231 RNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSV---KEALNHSFFHP 281 (408)
Q Consensus 231 ~~i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta---~e~L~Hpwf~~ 281 (408)
..+..+.+.++.. ..+++++.+||++||+.||++|||+ .++|+||||..
T Consensus 211 ~~~~~~~~~~~~~--~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~~~~~~ 262 (265)
T cd05579 211 QNILNGKIEWPED--VEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNHPFFKG 262 (265)
T ss_pred HHHhcCCcCCCcc--ccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcCccccC
Confidence 3344333333221 2358899999999999999999999 99999999975
No 250
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=99.96 E-value=1.2e-29 Score=240.33 Aligned_cols=197 Identities=27% Similarity=0.468 Sum_probs=146.9
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC-----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEE
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN-----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENIL 78 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~-----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NIL 78 (408)
++.|+++| .+.+ ...+..++|+||+.||. |.+.+. ++..+..++.||+.||+|||++|++||||||+||+
T Consensus 59 ~l~h~~iv-~~~~~~~~~~~~~~v~e~~~~~~--L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil 135 (268)
T cd06630 59 RLNHPHII-RMLGATCEDSHFNLFVEWMAGGS--VSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLL 135 (268)
T ss_pred HcCCCcee-hhhceeccCCeEEEEEeccCCCc--HHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEE
Confidence 36788855 5554 34456789999999997 766652 34788899999999999999999999999999999
Q ss_pred EecCC-CEEEeccccchhcccCcc-----cccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCC
Q psy3880 79 LDDQM-NVKLTDFGFARVLKKGEK-----LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFW 152 (408)
Q Consensus 79 l~~~~-~iKl~DFGla~~~~~~~~-----~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~ 152 (408)
++.++ .+||+|||++..+..... .....||..|+|||.+.. ..++.++|+||+||++|++++|..||.
T Consensus 136 ~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~------~~~~~~~Dv~slG~~l~~l~~g~~p~~ 209 (268)
T cd06630 136 IDSTGQRLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRG------EQYGRSCDVWSVGCVIIEMATAKPPWN 209 (268)
T ss_pred EcCCCCEEEEcccccccccccccccCCccccccccccceeCHhHhcc------CCCCcccchHHHHHHHHHHHhCCCCCC
Confidence 98765 599999999876653211 123468889999999854 346789999999999999999999985
Q ss_pred CchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHH
Q psy3880 153 HRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRN 232 (408)
Q Consensus 153 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~ 232 (408)
..........+ ..
T Consensus 210 ~~~~~~~~~~~-------------------------------------------------------------------~~ 222 (268)
T cd06630 210 AEKHSNHLALI-------------------------------------------------------------------FK 222 (268)
T ss_pred CCCCcchHHHH-------------------------------------------------------------------HH
Confidence 43211110000 00
Q ss_pred HHhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCC
Q psy3880 233 IMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFH 280 (408)
Q Consensus 233 i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~ 280 (408)
+...... ......++++++++|.+||..||++|||+.|+|+||||.
T Consensus 223 ~~~~~~~--~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~~~~~ 268 (268)
T cd06630 223 IASATTA--PSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKHPVFR 268 (268)
T ss_pred HhccCCC--CCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcCcccC
Confidence 0000000 011124688999999999999999999999999999984
No 251
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=99.96 E-value=1.3e-29 Score=239.32 Aligned_cols=198 Identities=30% Similarity=0.547 Sum_probs=147.1
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC-----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEE
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN-----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENIL 78 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~-----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NIL 78 (408)
.+.|++++ .+.+ ...+..++|+||+.++. |.+.+. +...++.++.|++.||.|||++||+|+||+|+||+
T Consensus 55 ~l~~~~i~-~~~~~~~~~~~~~lv~e~~~~~~--L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil 131 (264)
T cd06626 55 LLKHPNLV-KYYGVEVHREKVYIFMEYCSGGT--LEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIF 131 (264)
T ss_pred hCCCCChh-heeeeEecCCEEEEEEecCCCCc--HHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEE
Confidence 35788755 5443 45567899999999998 777653 44788899999999999999999999999999999
Q ss_pred EecCCCEEEeccccchhcccCcc-----cccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCC
Q psy3880 79 LDDQMNVKLTDFGFARVLKKGEK-----LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH 153 (408)
Q Consensus 79 l~~~~~iKl~DFGla~~~~~~~~-----~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~ 153 (408)
+++++.+||+|||++........ .....+++.|+|||++.... ...++.++|+||+||+++++++|..||..
T Consensus 132 ~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~---~~~~~~~~Dv~s~G~il~~l~~g~~pf~~ 208 (264)
T cd06626 132 LDHNGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGK---GKGHGRAADIWSLGCVVLEMATGKRPWSE 208 (264)
T ss_pred ECCCCCEEEcccccccccCCCCCcccccccCCcCCcCccChhhccCCC---CCCCCcccchHHHHHHHHHHHhCCCCccC
Confidence 99999999999999887643322 12356788999999986431 12356778888888888888888877743
Q ss_pred chhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHH
Q psy3880 154 RKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI 233 (408)
Q Consensus 154 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i 233 (408)
.... | .+.+....+.
T Consensus 209 ~~~~-----------------------------------------------~---~~~~~~~~~~--------------- 223 (264)
T cd06626 209 LDNE-----------------------------------------------F---QIMFHVGAGH--------------- 223 (264)
T ss_pred Ccch-----------------------------------------------H---HHHHHHhcCC---------------
Confidence 2100 0 0111111111
Q ss_pred HhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q psy3880 234 MEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFF 279 (408)
Q Consensus 234 ~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf 279 (408)
....+.+..+++.+++||.+||+.||.+|||+.|+++|||+
T Consensus 224 -----~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~ 264 (264)
T cd06626 224 -----KPPIPDSLQLSPEGKDFLDRCLESDPKKRPTASELLQHPFV 264 (264)
T ss_pred -----CCCCCcccccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 11223445678999999999999999999999999999996
No 252
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=99.96 E-value=1.5e-29 Score=245.55 Aligned_cols=187 Identities=22% Similarity=0.352 Sum_probs=139.6
Q ss_pred ccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC---------------------CHHHHHHHHHHHHHHHHHHHH
Q psy3880 8 AHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN---------------------SNPALRYIMRQLFEALEHVHN 64 (408)
Q Consensus 8 ~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~---------------------~~~~~r~i~~qil~aL~~LH~ 64 (408)
.|++++ .+.. +.++..|+||||+.+|. |.+.+. +.+++..++.||+.||+|||+
T Consensus 66 ~h~~iv-~~~~~~~~~~~~~lv~e~~~~~~--L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~ 142 (303)
T cd05088 66 HHPNII-NLLGACEHRGYLYLAIEYAPHGN--LLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ 142 (303)
T ss_pred CCCCcc-eEEEEECCCCCceEEEEeCCCCc--HHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHh
Confidence 677754 5543 55667899999999998 777653 346789999999999999999
Q ss_pred CCCeeccCCCCcEEEecCCCEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHH
Q psy3880 65 HSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTL 144 (408)
Q Consensus 65 ~~IvHRDLKp~NILl~~~~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~l 144 (408)
+||+||||||+|||++.++.+||+|||++.............++..|+|||.+.. ..++.++|+||+||++|+|
T Consensus 143 ~gi~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~el 216 (303)
T cd05088 143 KQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNY------SVYTTNSDVWSYGVLLWEI 216 (303)
T ss_pred CCccccccchheEEecCCCcEEeCccccCcccchhhhcccCCCcccccCHHHHhc------cCCcccccchhhhhHHHHH
Confidence 9999999999999999999999999999864321111111234567999998854 3467788999999999998
Q ss_pred Hh-CCCCCCCchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCC
Q psy3880 145 LV-GCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH 223 (408)
Q Consensus 145 l~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~ 223 (408)
++ |..||.+.+..+....+..
T Consensus 217 lt~g~~p~~~~~~~~~~~~~~~---------------------------------------------------------- 238 (303)
T cd05088 217 VSLGGTPYCGMTCAELYEKLPQ---------------------------------------------------------- 238 (303)
T ss_pred HhcCCCCcccCChHHHHHHHhc----------------------------------------------------------
Confidence 87 8888865443332222211
Q ss_pred chhHHHHHHHHhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcC
Q psy3880 224 RKQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNH 276 (408)
Q Consensus 224 ~~~~~~~~~i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~H 276 (408)
+ +.. +.+..+++++.+||.+||..||++|||++++|++
T Consensus 239 ------------~-~~~--~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 276 (303)
T cd05088 239 ------------G-YRL--EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS 276 (303)
T ss_pred ------------C-CcC--CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 0 000 1123467889999999999999999999999875
No 253
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=99.96 E-value=7.1e-30 Score=246.69 Aligned_cols=198 Identities=30% Similarity=0.516 Sum_probs=151.9
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEE
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILL 79 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl 79 (408)
.+.|++ |+.+.+ ..++..|+|+||+.+|. |.+.+. +..++..++.|++.||.|||++|++||||||+||++
T Consensus 72 ~l~hp~-i~~~~~~~~~~~~~~lv~e~~~~~~--L~~~~~~~~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili 148 (293)
T cd06647 72 ENKHPN-IVNYLDSYLVGDELWVVMEYLAGGS--LTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL 148 (293)
T ss_pred hcCCCC-eeehhheeeeCCcEEEEEecCCCCc--HHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEE
Confidence 357887 446554 34567799999999998 777654 347889999999999999999999999999999999
Q ss_pred ecCCCEEEeccccchhcccCc-ccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHH
Q psy3880 80 DDQMNVKLTDFGFARVLKKGE-KLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMV 158 (408)
Q Consensus 80 ~~~~~iKl~DFGla~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~ 158 (408)
+.++.++|+|||++....... ......|++.|+|||.+.. ..++.++|+||+||++|++++|..||...+...
T Consensus 149 ~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~------~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~ 222 (293)
T cd06647 149 GMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTR------KAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR 222 (293)
T ss_pred cCCCCEEEccCcceecccccccccccccCChhhcCchhhcc------CCCCchhhHHHHHHHHHHHHhCCCCCCCCChhh
Confidence 999999999999987654332 2233568899999998854 346788999999999999999999996644321
Q ss_pred HHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCC
Q psy3880 159 MLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKY 238 (408)
Q Consensus 159 ~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~ 238 (408)
.+..+. ..+.++
T Consensus 223 ~~~~~~--------------------------------------------------~~~~~~------------------ 234 (293)
T cd06647 223 ALYLIA--------------------------------------------------TNGTPE------------------ 234 (293)
T ss_pred heeehh--------------------------------------------------cCCCCC------------------
Confidence 111000 000011
Q ss_pred CCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCCC
Q psy3880 239 SFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKL 283 (408)
Q Consensus 239 ~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~~ 283 (408)
+ ..+..++..+++||++||..||++|||+.+++.||||....
T Consensus 235 -~--~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h~~~~~~~ 276 (293)
T cd06647 235 -L--QNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHPFLKIAK 276 (293)
T ss_pred -C--CCccccCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhcCc
Confidence 1 12335678899999999999999999999999999997653
No 254
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=99.96 E-value=2.6e-29 Score=239.74 Aligned_cols=188 Identities=19% Similarity=0.333 Sum_probs=145.3
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC-------------------CHHHHHHHHHHHHHHHHHHHH
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN-------------------SNPALRYIMRQLFEALEHVHN 64 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~-------------------~~~~~r~i~~qil~aL~~LH~ 64 (408)
.+.|++++ .+.. ......++||||+.||. |.+++. +...+..++.|++.||.|||+
T Consensus 64 ~l~~~~i~-~~~~~~~~~~~~~lv~e~~~~~~--L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~ 140 (280)
T cd05049 64 NFQHENIV-KFYGVCTEGDPPIMVFEYMEHGD--LNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLAS 140 (280)
T ss_pred hcCCCCch-heeeEEecCCCeEEEEecCCCCC--HHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhh
Confidence 46788755 4443 44467899999999998 877763 235778899999999999999
Q ss_pred CCCeeccCCCCcEEEecCCCEEEeccccchhcccCcc---cccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHH
Q psy3880 65 HSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEK---LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIM 141 (408)
Q Consensus 65 ~~IvHRDLKp~NILl~~~~~iKl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil 141 (408)
+|++||||||+||+++.++.+||+|||++..+..... .....+++.|+|||++.. ..++.++|+||+||++
T Consensus 141 ~~i~h~dlkp~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il 214 (280)
T cd05049 141 QHFVHRDLATRNCLVGYDLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMY------RKFTTESDVWSFGVVL 214 (280)
T ss_pred CCeeccccccceEEEcCCCeEEECCcccceecccCcceecCCCCcccceecChhhhcc------CCcchhhhHHHHHHHH
Confidence 9999999999999999999999999999875433221 122345678999999864 3578899999999999
Q ss_pred HHHHh-CCCCCCCchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCC
Q psy3880 142 YTLLV-GCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPP 220 (408)
Q Consensus 142 ~~ll~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~P 220 (408)
|+|++ |..||.+.+.......+..+
T Consensus 215 ~e~~~~g~~p~~~~~~~~~~~~~~~~------------------------------------------------------ 240 (280)
T cd05049 215 WEIFTYGKQPWYGLSNEEVIECITQG------------------------------------------------------ 240 (280)
T ss_pred HHHHhcCCCCCCCCCHHHHHHHHHcC------------------------------------------------------
Confidence 99998 99998765554443333221
Q ss_pred CCCchhHHHHHHHHhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHc
Q psy3880 221 FWHRKQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALN 275 (408)
Q Consensus 221 f~~~~~~~~~~~i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~ 275 (408)
..... ...++.++++||++||..||++|||++|+++
T Consensus 241 ----------------~~~~~---~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 276 (280)
T cd05049 241 ----------------RLLQR---PRTCPSEVYDIMLGCWKRDPQQRINIKDIHE 276 (280)
T ss_pred ----------------CcCCC---CCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 11110 1246788999999999999999999999985
No 255
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=99.96 E-value=3.9e-29 Score=242.27 Aligned_cols=145 Identities=21% Similarity=0.398 Sum_probs=113.5
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhCC------------------------HHHHHHHHHHHHHHH
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIINS------------------------NPALRYIMRQLFEAL 59 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~~------------------------~~~~r~i~~qil~aL 59 (408)
.+.|+|+| .+.+ ..++..++||||+.+|. |.+++.. ...+..++.||+.||
T Consensus 75 ~l~h~niv-~~~~~~~~~~~~~lv~e~~~~~~--L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al 151 (304)
T cd05096 75 RLKDPNII-RLLGVCVDEDPLCMITEYMENGD--LNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGM 151 (304)
T ss_pred hcCCCCee-EEEEEEecCCceEEEEecCCCCc--HHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHH
Confidence 46798855 5543 44567899999999998 8776632 245778999999999
Q ss_pred HHHHHCCCeeccCCCCcEEEecCCCEEEeccccchhcccCcc---cccCCCCCcccChhhhhhccccCcCCCCcchhhhh
Q psy3880 60 EHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEK---LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWA 136 (408)
Q Consensus 60 ~~LH~~~IvHRDLKp~NILl~~~~~iKl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwS 136 (408)
.|||++||+||||||+|||++.++.+||+|||+++.+..... .....++..|+|||++.. ..++.++|+||
T Consensus 152 ~~lH~~~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~s 225 (304)
T cd05096 152 KYLSSLNFVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILM------GKFTTASDVWA 225 (304)
T ss_pred HHHHHCCccccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhc------CCCCchhhhHH
Confidence 999999999999999999999999999999999986544322 122455788999999864 34788999999
Q ss_pred hhHHHHHHHh--CCCCCCCchhHHH
Q psy3880 137 CGVIMYTLLV--GCPPFWHRKQMVM 159 (408)
Q Consensus 137 lGvil~~ll~--G~~pf~~~~~~~~ 159 (408)
|||++|+|++ +..||.+.+..+.
T Consensus 226 lG~~l~el~~~~~~~p~~~~~~~~~ 250 (304)
T cd05096 226 FGVTLWEILMLCKEQPYGELTDEQV 250 (304)
T ss_pred HHHHHHHHHHccCCCCCCcCCHHHH
Confidence 9999999986 5567765544433
No 256
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.96 E-value=2.5e-29 Score=258.72 Aligned_cols=201 Identities=27% Similarity=0.359 Sum_probs=144.1
Q ss_pred HHHHHHHHHhhchhhHHhhhCC-----------------------------HHHHHHHHHHHHHHHHHHHHCCCeeccCC
Q psy3880 23 LKHLAAQVVDKGEAAVQDIINS-----------------------------NPALRYIMRQLFEALEHVHNHSVVHRDLK 73 (408)
Q Consensus 23 ~~~lv~e~~~~g~~~l~~~~~~-----------------------------~~~~r~i~~qil~aL~~LH~~~IvHRDLK 73 (408)
..+||+||+.+|. |.+.+.. ...++.++.|++.||.|||+++|+|||||
T Consensus 259 ~~~LV~Ey~~~gs--L~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLK 336 (507)
T PLN03224 259 SQWLVWKFESDAT--LGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIK 336 (507)
T ss_pred ceEEEEEcCCCCc--HHHHHhhccCCCcchHHHHHhcCCchhhhcccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCc
Confidence 4578888888877 6655431 24578899999999999999999999999
Q ss_pred CCcEEEecCCCEEEeccccchhcccCcccccC--CCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCC
Q psy3880 74 PENILLDDQMNVKLTDFGFARVLKKGEKLMDL--CGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151 (408)
Q Consensus 74 p~NILl~~~~~iKl~DFGla~~~~~~~~~~~~--~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf 151 (408)
|+|||++.++.+||+|||++..+..+...... .+|+.|+|||.+... .....++.++++.++.......
T Consensus 337 p~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE~l~~~------~~~~~~~~~~~~~~l~~~~~~y--- 407 (507)
T PLN03224 337 PENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPEELVMP------QSCPRAPAPAMAALLSPFAWLY--- 407 (507)
T ss_pred hHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeChhhhcCC------CCCCccchhhhhhhhhhhHHhc---
Confidence 99999999999999999999765443322222 347899999998642 2234445555444433322110
Q ss_pred CCchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCC-CCCCchh----
Q psy3880 152 WHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCP-PFWHRKQ---- 226 (408)
Q Consensus 152 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~-Pf~~~~~---- 226 (408)
+.....|+||+||++|+|++|.. ||.....
T Consensus 408 ---------------------------------------------g~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~ 442 (507)
T PLN03224 408 ---------------------------------------------GRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTE 442 (507)
T ss_pred ---------------------------------------------CCCCccchhhHHHHHHHHHhCCCCCccchhhhhhH
Confidence 01125799999999999999875 7653211
Q ss_pred -------HHHHHHHHhcCCCCCCCcCCCCCccHHHHHHHhcccCC---CCCCCHHHHHcCCCCCC
Q psy3880 227 -------MVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTP---EDRYSVKEALNHSFFHP 281 (408)
Q Consensus 227 -------~~~~~~i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP---~~R~ta~e~L~Hpwf~~ 281 (408)
....+.+....+.| +.|+.+|++++|||.+||..+| .+|+||+|+|+||||.+
T Consensus 443 ~~~~~~~~~~~r~~~~~~~~~--~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~f~~ 505 (507)
T PLN03224 443 LRQYDNDLNRWRMYKGQKYDF--SLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRFFLP 505 (507)
T ss_pred HhhccchHHHHHhhcccCCCc--ccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCCcCC
Confidence 11122233344444 3578899999999999999876 68999999999999965
No 257
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=99.96 E-value=3e-29 Score=242.46 Aligned_cols=187 Identities=19% Similarity=0.336 Sum_probs=139.8
Q ss_pred ccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC---------------------CHHHHHHHHHHHHHHHHHHHH
Q psy3880 8 AHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN---------------------SNPALRYIMRQLFEALEHVHN 64 (408)
Q Consensus 8 ~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~---------------------~~~~~r~i~~qil~aL~~LH~ 64 (408)
.|+++| .+.+ ...+..|+|+||+.+|. |.+.+. +.+.++.++.|++.||+|||+
T Consensus 61 ~hp~iv-~~~~~~~~~~~~~lv~e~~~~~~--L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~ 137 (297)
T cd05089 61 HHPNII-NLLGACENRGYLYIAIEYAPYGN--LLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSE 137 (297)
T ss_pred CCCchh-heEEEEccCCcceEEEEecCCCc--HHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 577755 5543 44567899999999998 777763 236788999999999999999
Q ss_pred CCCeeccCCCCcEEEecCCCEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHH
Q psy3880 65 HSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTL 144 (408)
Q Consensus 65 ~~IvHRDLKp~NILl~~~~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~l 144 (408)
+||+||||||+|||++.++.+||+|||++..............+..|+|||.+.. ..++.++|+|||||++|+|
T Consensus 138 ~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~------~~~~~~~DvwSlG~il~el 211 (297)
T cd05089 138 KQFIHRDLAARNVLVGENLASKIADFGLSRGEEVYVKKTMGRLPVRWMAIESLNY------SVYTTKSDVWSFGVLLWEI 211 (297)
T ss_pred CCcccCcCCcceEEECCCCeEEECCcCCCccccceeccCCCCcCccccCchhhcc------CCCCchhhHHHHHHHHHHH
Confidence 9999999999999999999999999999864322111111223457999998854 3467889999999999999
Q ss_pred Hh-CCCCCCCchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCC
Q psy3880 145 LV-GCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH 223 (408)
Q Consensus 145 l~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~ 223 (408)
++ |..||.+........++..+
T Consensus 212 ~t~g~~pf~~~~~~~~~~~~~~~--------------------------------------------------------- 234 (297)
T cd05089 212 VSLGGTPYCGMTCAELYEKLPQG--------------------------------------------------------- 234 (297)
T ss_pred HcCCCCCCCCCCHHHHHHHHhcC---------------------------------------------------------
Confidence 87 88888665443333322211
Q ss_pred chhHHHHHHHHhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcC
Q psy3880 224 RKQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNH 276 (408)
Q Consensus 224 ~~~~~~~~~i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~H 276 (408)
+.. +....++.++++||.+||..||.+|||++++++.
T Consensus 235 --------------~~~--~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~ 271 (297)
T cd05089 235 --------------YRM--EKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQ 271 (297)
T ss_pred --------------CCC--CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 001 1113468899999999999999999999999753
No 258
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.96 E-value=1.3e-29 Score=250.32 Aligned_cols=206 Identities=26% Similarity=0.448 Sum_probs=144.2
Q ss_pred HHHHHHHHhhchhhHHhhh----CCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEec-CCCEEEeccccchhccc
Q psy3880 24 KHLAAQVVDKGEAAVQDII----NSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDD-QMNVKLTDFGFARVLKK 98 (408)
Q Consensus 24 ~~lv~e~~~~g~~~l~~~~----~~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl~~-~~~iKl~DFGla~~~~~ 98 (408)
.|+|+||+.+ . |.+.+ .++..++.++.||+.||+|||++||+||||||+||+++. ++.+|++|||++..+..
T Consensus 91 ~~lv~e~~~~-~--L~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~~~~~kl~dfg~~~~~~~ 167 (342)
T cd07854 91 VYIVQEYMET-D--LANVLEQGPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTEDLVLKIGDFGLARIVDP 167 (342)
T ss_pred EEEEeecccc-c--HHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCceEEECCcccceecCC
Confidence 5799999974 4 65554 345899999999999999999999999999999999974 55789999999876543
Q ss_pred Ccc----cccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHHHHHHHHhccccCCCCC
Q psy3880 99 GEK----LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPE 174 (408)
Q Consensus 99 ~~~----~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~~~~~i~~~~~~~~~~~ 174 (408)
... .....++..|+|||.+... ..++.++|+||+||++|+|++|..||.+.+.......+........
T Consensus 168 ~~~~~~~~~~~~~~~~y~aPE~~~~~-----~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~--- 239 (342)
T cd07854 168 HYSHKGYLSEGLVTKWYRSPRLLLSP-----NNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVR--- 239 (342)
T ss_pred ccccccccccccccccccCHHHHhCc-----cccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCC---
Confidence 211 1224678899999987542 3577899999999999999999999998877766666554321100
Q ss_pred CccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhh-cCCCCCCCchhHHHHHHHHhcCCCCCCCcCCCCCccHH
Q psy3880 175 WNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLL-VGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISEDPK 253 (408)
Q Consensus 175 ~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll-~g~~Pf~~~~~~~~~~~i~~~~~~f~~~~~~~iS~~~~ 253 (408)
++... ..++ +.. ..+. ....+... ... .-..++.+++
T Consensus 240 ---------~~~~~--------------~~~~-~~~-~~~~~~~~~~~~~------~~~-----------~~~~~~~~~~ 277 (342)
T cd07854 240 ---------EEDRN--------------ELLN-VIP-SFVRNDGGEPRRP------LRD-----------LLPGVNPEAL 277 (342)
T ss_pred ---------hHHhh--------------hhhh-hhh-hhhhhcccccCCC------HHH-----------HccCCCHHHH
Confidence 00000 0000 000 0000 00000000 000 0124788999
Q ss_pred HHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q psy3880 254 DLIRKLLIVTPEDRYSVKEALNHSFFHPK 282 (408)
Q Consensus 254 dLI~klL~~dP~~R~ta~e~L~Hpwf~~~ 282 (408)
+||++||+.||.+|||++|+|+||||+..
T Consensus 278 ~li~~~L~~dP~~R~t~~ell~h~~~~~~ 306 (342)
T cd07854 278 DFLEQILTFNPMDRLTAEEALMHPYMSCY 306 (342)
T ss_pred HHHHHHhCCCchhccCHHHHhCCCccccc
Confidence 99999999999999999999999999754
No 259
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.96 E-value=9.6e-30 Score=244.57 Aligned_cols=199 Identities=32% Similarity=0.576 Sum_probs=147.0
Q ss_pred ccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC-----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEe
Q psy3880 8 AHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN-----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLD 80 (408)
Q Consensus 8 ~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~-----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl~ 80 (408)
.|++ |+.+.. +.+...|+|+||+.+|. |.+.+. ....++.++.|++.||.|||++|++||||||+|||++
T Consensus 63 ~~~~-i~~~~~~~~~~~~~~lv~e~~~~~~--L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~ 139 (290)
T cd05613 63 QSPF-LVTLHYAFQTDTKLHLILDYINGGE--LFTHLSQRERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLD 139 (290)
T ss_pred cCCC-hhceeeEeecCCeEEEEEecCCCCc--HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEC
Confidence 3555 556553 44566789999999998 887763 4578899999999999999999999999999999999
Q ss_pred cCCCEEEeccccchhcccCc--ccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHH
Q psy3880 81 DQMNVKLTDFGFARVLKKGE--KLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMV 158 (408)
Q Consensus 81 ~~~~iKl~DFGla~~~~~~~--~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~ 158 (408)
.++.+||+|||++....... ......|+..|+|||.+... ...++.++|+||+||++|+|++|..||.....
T Consensus 140 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~----~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~-- 213 (290)
T cd05613 140 SNGHVVLTDFGLSKEFHEDEVERAYSFCGTIEYMAPDIVRGG----DGGHDKAVDWWSMGVLMYELLTGASPFTVDGE-- 213 (290)
T ss_pred CCCCEEEeeCccceecccccccccccccCCcccCChhhccCC----CCCCCccccHHHHHHHHHHHhcCCCCCCcCCc--
Confidence 99999999999987654322 22346789999999988542 12356678888888888888888877732110
Q ss_pred HHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCC
Q psy3880 159 MLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKY 238 (408)
Q Consensus 159 ~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~ 238 (408)
......+...+.....
T Consensus 214 ----------------------------------------------------------------~~~~~~~~~~~~~~~~ 229 (290)
T cd05613 214 ----------------------------------------------------------------KNSQAEISRRILKSEP 229 (290)
T ss_pred ----------------------------------------------------------------cccHHHHHHHhhccCC
Confidence 0011122223332222
Q ss_pred CCCCCcCCCCCccHHHHHHHhcccCCCCCC-----CHHHHHcCCCCCCCC
Q psy3880 239 SFSSPEWNDISEDPKDLIRKLLIVTPEDRY-----SVKEALNHSFFHPKL 283 (408)
Q Consensus 239 ~f~~~~~~~iS~~~~dLI~klL~~dP~~R~-----ta~e~L~Hpwf~~~~ 283 (408)
.++ ..+++.+.+||++||..||++|+ +++++++||||+...
T Consensus 230 ~~~----~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~ 275 (290)
T cd05613 230 PYP----QEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQKIN 275 (290)
T ss_pred CCC----ccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcCcccccCC
Confidence 221 34688899999999999999997 899999999997753
No 260
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=99.96 E-value=3.3e-29 Score=236.71 Aligned_cols=189 Identities=19% Similarity=0.287 Sum_probs=144.5
Q ss_pred ccccCCcEEEEeccCCcHHHHHHHHHhhchhhHHhhhC-----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEe
Q psy3880 6 MVAHSRVVVRVKEEGDDLKHLAAQVVDKGEAAVQDIIN-----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLD 80 (408)
Q Consensus 6 ~~~~~~~i~~~~~~~~~~~~lv~e~~~~g~~~l~~~~~-----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl~ 80 (408)
.+.|++++..+....++..++||||+.+|. |.+.+. +++.+..++.|++.||+|||++||+||||||.||+++
T Consensus 52 ~l~h~~i~~~~~~~~~~~~~lv~e~~~~~~--L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~ 129 (257)
T cd05116 52 QLDNPYIVRMIGICEAESWMLVMELAELGP--LNKFLQKNKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLV 129 (257)
T ss_pred hCCCCCcceEEEEEcCCCcEEEEecCCCCc--HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEc
Confidence 468998664443334456689999999997 777663 4578899999999999999999999999999999999
Q ss_pred cCCCEEEeccccchhcccCccc----ccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHh-CCCCCCCch
Q psy3880 81 DQMNVKLTDFGFARVLKKGEKL----MDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPFWHRK 155 (408)
Q Consensus 81 ~~~~iKl~DFGla~~~~~~~~~----~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~-G~~pf~~~~ 155 (408)
.++.+||+|||++..+...... ....+++.|+|||.+.. ..++.++|+|||||++|+|++ |..||.+.+
T Consensus 130 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~~l~el~t~g~~p~~~~~ 203 (257)
T cd05116 130 TQHYAKISDFGLSKALGADENYYKAKTHGKWPVKWYAPECMNY------YKFSSKSDVWSFGVLMWEAFSYGQKPYKGMK 203 (257)
T ss_pred CCCeEEECCCccccccCCCCCeeeecCCCCCCccccCHhHhcc------CCcCchhHHHHHHHHHHHHHhCCCCCCCCCC
Confidence 9999999999999876543221 12234578999998753 346789999999999999997 999997655
Q ss_pred hHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHh
Q psy3880 156 QMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIME 235 (408)
Q Consensus 156 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~ 235 (408)
.......+..+.
T Consensus 204 ~~~~~~~i~~~~-------------------------------------------------------------------- 215 (257)
T cd05116 204 GNEVTQMIESGE-------------------------------------------------------------------- 215 (257)
T ss_pred HHHHHHHHHCCC--------------------------------------------------------------------
Confidence 444433332211
Q ss_pred cCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHc
Q psy3880 236 GKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALN 275 (408)
Q Consensus 236 ~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~ 275 (408)
. .+ ....++++++|||.+||+.||++|||+.++..
T Consensus 216 --~-~~--~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~ 250 (257)
T cd05116 216 --R-ME--CPQRCPPEMYDLMKLCWTYGVDERPGFAVVEL 250 (257)
T ss_pred --C-CC--CCCCCCHHHHHHHHHHhccCchhCcCHHHHHH
Confidence 0 00 01246889999999999999999999987753
No 261
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.96 E-value=4.1e-29 Score=238.50 Aligned_cols=221 Identities=30% Similarity=0.522 Sum_probs=156.7
Q ss_pred ccccCCcEEEEec--cCC--cHHHHHHHHHhhchhhHHhhh------CCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCC
Q psy3880 6 MVAHSRVVVRVKE--EGD--DLKHLAAQVVDKGEAAVQDII------NSNPALRYIMRQLFEALEHVHNHSVVHRDLKPE 75 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~--~~~~lv~e~~~~g~~~l~~~~------~~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~ 75 (408)
.+.|++++ .+.+ ..+ +..++|+||+.++ |.+.+ .+.+.+..++.||+.||+|||++|++|+||||+
T Consensus 54 ~l~~~~i~-~~~~~~~~~~~~~~~lv~e~~~~~---l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~ 129 (287)
T cd07840 54 KLRHPNIV-RLKEIVTSKGKGSIYMVFEYMDHD---LTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGS 129 (287)
T ss_pred hccCCCee-eheeeEecCCCCcEEEEecccccc---HHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHH
Confidence 35688755 4443 222 5689999999863 55444 345788999999999999999999999999999
Q ss_pred cEEEecCCCEEEeccccchhcccCc--ccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCC
Q psy3880 76 NILLDDQMNVKLTDFGFARVLKKGE--KLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH 153 (408)
Q Consensus 76 NILl~~~~~iKl~DFGla~~~~~~~--~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~ 153 (408)
||++++++.+||+|||++....... ......++..|+|||.+.+. ..++.++|+||+||++|+|++|..||..
T Consensus 130 nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~-----~~~~~~~Dv~slG~~l~el~t~~~p~~~ 204 (287)
T cd07840 130 NILINNDGVLKLADFGLARPYTKRNSADYTNRVITLWYRPPELLLGA-----TRYGPEVDMWSVGCILAELFLGKPIFQG 204 (287)
T ss_pred HeEEcCCCCEEEccccceeeccCCCcccccccccccccCCceeeEcc-----ccCChHHHHHHHHHHHHHHHhCCCCCCC
Confidence 9999999999999999998665432 12335678899999987542 3467899999999999999999999998
Q ss_pred chhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHH
Q psy3880 154 RKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI 233 (408)
Q Consensus 154 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i 233 (408)
.+....+..+...........|...... +.|. ......++ ...+...
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~-------~~~~~~~~-----~~~~~~~ 251 (287)
T cd07840 205 STELEQLEKIFELCGSPTDENWPGVSKL---------------------PWFE-------NLKPKKPY-----KRRLREF 251 (287)
T ss_pred CChHHHHHHHHHHhCCCchhhccccccc---------------------hhhh-------hccccccc-----hhHHHHH
Confidence 8877777766554332222222211100 0000 00000000 0011111
Q ss_pred HhcCCCCCCCcCCC-CCccHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q psy3880 234 MEGKYSFSSPEWND-ISEDPKDLIRKLLIVTPEDRYSVKEALNHSFF 279 (408)
Q Consensus 234 ~~~~~~f~~~~~~~-iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf 279 (408)
... .++++.++|++||..||.+|||+.++++||||
T Consensus 252 -----------~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~~~~ 287 (287)
T cd07840 252 -----------FKHLIDPSALDLLDKLLTLDPKKRISADQALQHEYF 287 (287)
T ss_pred -----------hcccCCHHHHHHHHHHcCCChhhCcCHHHHhhCcCC
Confidence 112 48899999999999999999999999999998
No 262
>KOG0664|consensus
Probab=99.96 E-value=2e-29 Score=231.74 Aligned_cols=209 Identities=29% Similarity=0.469 Sum_probs=155.6
Q ss_pred HHHHHHHHhhchhhHHhhhCCH-----HHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEecCCCEEEeccccchhccc
Q psy3880 24 KHLAAQVVDKGEAAVQDIINSN-----PALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKK 98 (408)
Q Consensus 24 ~~lv~e~~~~g~~~l~~~~~~~-----~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl~~~~~iKl~DFGla~~~~~ 98 (408)
.|.+.|++... |-.+|.+. +.++-+++||+.||.|||+.||.||||||.|+|++++..+||||||+|+..+.
T Consensus 132 iYV~TELmQSD---LHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~ 208 (449)
T KOG0664|consen 132 LYVLTELMQSD---LHKIIVSPQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNCILKICDFGLARTWDQ 208 (449)
T ss_pred HHHHHHHHHhh---hhheeccCCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCceEEecccccccccch
Confidence 48999999765 66777654 78999999999999999999999999999999999999999999999998765
Q ss_pred Cc--ccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHHHHHHHHhccccCCCCCCc
Q psy3880 99 GE--KLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWN 176 (408)
Q Consensus 99 ~~--~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 176 (408)
.+ .+...+.|.+|+|||++.+ +..|+.++||||.|||+.|++..+..|...+..+++..|..--.+++.
T Consensus 209 d~~~hMTqEVVTQYYRAPEiLMG-----aRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~---- 279 (449)
T KOG0664|consen 209 RDRLNMTHEVVTQYYRAPELLMG-----ARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQ---- 279 (449)
T ss_pred hhhhhhHHHHHHHHhccHHHhhc-----chhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcH----
Confidence 43 3344667899999999987 467999999999999999999999999999998888888654332221
Q ss_pred cCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcC-CCCCCCchhHHHHHHHHhcCCCCCCCcCCCCCccHHHH
Q psy3880 177 DISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVG-CPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISEDPKDL 255 (408)
Q Consensus 177 ~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g-~~Pf~~~~~~~~~~~i~~~~~~f~~~~~~~iS~~~~dL 255 (408)
|..+.. |. |.-...|-.+ ++|-.. --|...++ .+...++.++
T Consensus 280 --------EaMr~A-----------CE----GAk~H~LR~~~k~Ps~~------------vLYtlsS~--~~~~heav~~ 322 (449)
T KOG0664|consen 280 --------EAMKYA-----------CE----GAKNHVLRAGLRAPDTQ------------RLYKIASP--DDKNHEAVDL 322 (449)
T ss_pred --------HHHHHH-----------hh----hhHHHhhccCCCCCCcc------------ceeeecCC--cccchHHHHH
Confidence 111110 00 0001111111 111000 00111221 2345678899
Q ss_pred HHHhcccCCCCCCCHHHHHcCCCCCC
Q psy3880 256 IRKLLIVTPEDRYSVKEALNHSFFHP 281 (408)
Q Consensus 256 I~klL~~dP~~R~ta~e~L~Hpwf~~ 281 (408)
+.+||.+||.+|++.++++.|+|...
T Consensus 323 ~~~~l~~d~dkris~~~A~~~~~~~e 348 (449)
T KOG0664|consen 323 LQKLLHFDPDKRISVEEALQHRYLEE 348 (449)
T ss_pred HHHHhCCCCcccccHhhhcccccccc
Confidence 99999999999999999999999854
No 263
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=99.96 E-value=4.9e-29 Score=240.12 Aligned_cols=189 Identities=19% Similarity=0.337 Sum_probs=145.0
Q ss_pred cccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC---------------------CHHHHHHHHHHHHHHHHH
Q psy3880 5 EMVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN---------------------SNPALRYIMRQLFEALEH 61 (408)
Q Consensus 5 ~~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~---------------------~~~~~r~i~~qil~aL~~ 61 (408)
..+.|++++ .+.. ..++..++||||+.+|. |.+++. +...+..++.||+.||+|
T Consensus 62 ~~l~h~~i~-~~~~~~~~~~~~~lv~e~~~~~~--L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~ 138 (291)
T cd05094 62 TNLQHEHIV-KFYGVCGDGDPLIMVFEYMKHGD--LNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVY 138 (291)
T ss_pred hcCCCCCcc-eEEEEEccCCceEEEEecCCCCc--HHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence 357898855 4443 45567899999999998 877763 346789999999999999
Q ss_pred HHHCCCeeccCCCCcEEEecCCCEEEeccccchhcccCcc---cccCCCCCcccChhhhhhccccCcCCCCcchhhhhhh
Q psy3880 62 VHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEK---LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACG 138 (408)
Q Consensus 62 LH~~~IvHRDLKp~NILl~~~~~iKl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlG 138 (408)
||++||+||||||+|||++.++.++|+|||++........ .....+++.|+|||.+.. ..++.++|+||+|
T Consensus 139 lH~~~i~H~dlkp~Nil~~~~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG 212 (291)
T cd05094 139 LASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMY------RKFTTESDVWSFG 212 (291)
T ss_pred HHhCCeeecccCcceEEEccCCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhcc------CCCCchhhHHHHH
Confidence 9999999999999999999999999999999876543221 123456788999998864 3467889999999
Q ss_pred HHHHHHHh-CCCCCCCchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcC
Q psy3880 139 VIMYTLLV-GCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVG 217 (408)
Q Consensus 139 vil~~ll~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g 217 (408)
|++|+|++ |..||...+.......+..+
T Consensus 213 ~il~el~t~g~~p~~~~~~~~~~~~~~~~--------------------------------------------------- 241 (291)
T cd05094 213 VILWEIFTYGKQPWFQLSNTEVIECITQG--------------------------------------------------- 241 (291)
T ss_pred HHHHHHHhCCCCCCCCCCHHHHHHHHhCC---------------------------------------------------
Confidence 99999998 99998665544333322211
Q ss_pred CCCCCCchhHHHHHHHHhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHc
Q psy3880 218 CPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALN 275 (408)
Q Consensus 218 ~~Pf~~~~~~~~~~~i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~ 275 (408)
.... .....+.++.+||.+||+.||++|||+.++++
T Consensus 242 -------------------~~~~---~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~ 277 (291)
T cd05094 242 -------------------RVLE---RPRVCPKEVYDIMLGCWQREPQQRLNIKEIYK 277 (291)
T ss_pred -------------------CCCC---CCccCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence 1100 01235778999999999999999999999875
No 264
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=99.96 E-value=4.5e-29 Score=235.85 Aligned_cols=189 Identities=21% Similarity=0.402 Sum_probs=142.3
Q ss_pred ccccCCcEEEEe-ccCCcHHHHHHHHHhhchhhHHhhhCC-------HHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcE
Q psy3880 6 MVAHSRVVVRVK-EEGDDLKHLAAQVVDKGEAAVQDIINS-------NPALRYIMRQLFEALEHVHNHSVVHRDLKPENI 77 (408)
Q Consensus 6 ~~~~~~~i~~~~-~~~~~~~~lv~e~~~~g~~~l~~~~~~-------~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NI 77 (408)
++.|+|++..+. ...++..++++||+.+|. |.+.+.+ .+.+..++.|++.||+|||+++++||||||+||
T Consensus 57 ~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~--L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~ni 134 (261)
T cd05072 57 TLQHDKLVRLYAVVTKEEPIYIITEYMAKGS--LLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANV 134 (261)
T ss_pred hCCCCCeeeEEEEEcCCCCcEEEEecCCCCc--HHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhE
Confidence 578998664332 355567899999999998 8777632 367788999999999999999999999999999
Q ss_pred EEecCCCEEEeccccchhcccCccc--ccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHh-CCCCCCCc
Q psy3880 78 LLDDQMNVKLTDFGFARVLKKGEKL--MDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPFWHR 154 (408)
Q Consensus 78 Ll~~~~~iKl~DFGla~~~~~~~~~--~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~-G~~pf~~~ 154 (408)
+++.++.+||+|||++......... ....++..|+|||.+.. ..++.++|+||+||++|+|++ |..||.+.
T Consensus 135 li~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~~l~~l~t~g~~p~~~~ 208 (261)
T cd05072 135 LVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINF------GSFTIKSDVWSFGILLYEIVTYGKIPYPGM 208 (261)
T ss_pred EecCCCcEEECCCccceecCCCceeccCCCccceecCCHHHhcc------CCCChhhhhhhhHHHHHHHHccCCCCCCCC
Confidence 9999999999999999876543211 12345668999998854 346678888888888888887 88887654
Q ss_pred hhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHH
Q psy3880 155 KQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIM 234 (408)
Q Consensus 155 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~ 234 (408)
........+..
T Consensus 209 ~~~~~~~~~~~--------------------------------------------------------------------- 219 (261)
T cd05072 209 SNSDVMSALQR--------------------------------------------------------------------- 219 (261)
T ss_pred CHHHHHHHHHc---------------------------------------------------------------------
Confidence 43333222211
Q ss_pred hcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHc
Q psy3880 235 EGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALN 275 (408)
Q Consensus 235 ~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~ 275 (408)
+ +. .+....++.++.+||.+||..||++|||++++++
T Consensus 220 -~-~~--~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 256 (261)
T cd05072 220 -G-YR--MPRMENCPDELYDIMKTCWKEKAEERPTFDYLQS 256 (261)
T ss_pred -C-CC--CCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 1 11 1122356888999999999999999999998864
No 265
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=99.96 E-value=5.8e-29 Score=235.41 Aligned_cols=189 Identities=22% Similarity=0.374 Sum_probs=143.6
Q ss_pred ccccCCcEEEEeccCCcHHHHHHHHHhhchhhHHhhhC-------CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEE
Q psy3880 6 MVAHSRVVVRVKEEGDDLKHLAAQVVDKGEAAVQDIIN-------SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENIL 78 (408)
Q Consensus 6 ~~~~~~~i~~~~~~~~~~~~lv~e~~~~g~~~l~~~~~-------~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NIL 78 (408)
.+.|++++..+....++..++||||+.+|. |.+++. +.+.+..++.|++.||+|||++||+||||||+||+
T Consensus 57 ~l~h~~i~~~~~~~~~~~~~~v~e~~~~~~--L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nil 134 (260)
T cd05069 57 KLRHDKLVPLYAVVSEEPIYIVTEFMGKGS--LLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANIL 134 (260)
T ss_pred hCCCCCeeeEEEEEcCCCcEEEEEcCCCCC--HHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEE
Confidence 468998664444455566789999999998 777763 33678899999999999999999999999999999
Q ss_pred EecCCCEEEeccccchhcccCccc--ccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHh-CCCCCCCch
Q psy3880 79 LDDQMNVKLTDFGFARVLKKGEKL--MDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPFWHRK 155 (408)
Q Consensus 79 l~~~~~iKl~DFGla~~~~~~~~~--~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~-G~~pf~~~~ 155 (408)
+++++.++|+|||++......... ....++..|+|||.+.. ..++.++|+||+||++|+|++ |..||.+..
T Consensus 135 l~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~------~~~~~~~Di~slG~~l~el~t~g~~p~~~~~ 208 (260)
T cd05069 135 VGDNLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY------GRFTIKSDVWSFGILLTELVTKGRVPYPGMV 208 (260)
T ss_pred EcCCCeEEECCCccceEccCCcccccCCCccchhhCCHHHhcc------CCcChHHHHHHHHHHHHHHHhCCCCCCCCCC
Confidence 999999999999999765433211 12345678999998754 346778899999999999988 888886654
Q ss_pred hHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHh
Q psy3880 156 QMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIME 235 (408)
Q Consensus 156 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~ 235 (408)
.......+..
T Consensus 209 ~~~~~~~~~~---------------------------------------------------------------------- 218 (260)
T cd05069 209 NREVLEQVER---------------------------------------------------------------------- 218 (260)
T ss_pred HHHHHHHHHc----------------------------------------------------------------------
Confidence 4333332221
Q ss_pred cCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHc
Q psy3880 236 GKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALN 275 (408)
Q Consensus 236 ~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~ 275 (408)
+ +. .+.....+..+++||++||..||++|||++++++
T Consensus 219 ~-~~--~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 255 (260)
T cd05069 219 G-YR--MPCPQGCPESLHELMKLCWKKDPDERPTFEYIQS 255 (260)
T ss_pred C-CC--CCCCcccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 1 00 1112346788999999999999999999998874
No 266
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=99.96 E-value=4.1e-29 Score=238.58 Aligned_cols=189 Identities=20% Similarity=0.350 Sum_probs=143.5
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhCC---------------HHHHHHHHHHHHHHHHHHHHCCCe
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIINS---------------NPALRYIMRQLFEALEHVHNHSVV 68 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~~---------------~~~~r~i~~qil~aL~~LH~~~Iv 68 (408)
.+.|+|++ ++.+ ......++||||+.+|. |.+++.+ ...+..++.|++.||+|||++|++
T Consensus 65 ~l~~~~iv-~~~~~~~~~~~~~lv~e~~~~~~--L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~v 141 (277)
T cd05062 65 EFNCHHVV-RLLGVVSQGQPTLVIMELMTRGD--LKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFV 141 (277)
T ss_pred hCCCCCee-eEEEEEcCCCCeEEEEecCCCCC--HHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 46788755 5554 34456789999999998 8777642 246778899999999999999999
Q ss_pred eccCCCCcEEEecCCCEEEeccccchhcccCccc---ccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHH
Q psy3880 69 HRDLKPENILLDDQMNVKLTDFGFARVLKKGEKL---MDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLL 145 (408)
Q Consensus 69 HRDLKp~NILl~~~~~iKl~DFGla~~~~~~~~~---~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll 145 (408)
||||||+|||+++++.++|+|||++......... ....+++.|+|||++.. ..++.++|+|||||++|+|+
T Consensus 142 H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~~l~el~ 215 (277)
T cd05062 142 HRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKD------GVFTTYSDVWSFGVVLWEIA 215 (277)
T ss_pred cCCcchheEEEcCCCCEEECCCCCccccCCcceeecCCCCccCHhhcChhHhhc------CCcCchhHHHHHHHHHHHHH
Confidence 9999999999999999999999998765432211 12345778999999864 34678999999999999999
Q ss_pred h-CCCCCCCchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCc
Q psy3880 146 V-GCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHR 224 (408)
Q Consensus 146 ~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~ 224 (408)
+ |..||.+.+.......+..+
T Consensus 216 ~~~~~p~~~~~~~~~~~~~~~~---------------------------------------------------------- 237 (277)
T cd05062 216 TLAEQPYQGMSNEQVLRFVMEG---------------------------------------------------------- 237 (277)
T ss_pred cCCCCCCCCCCHHHHHHHHHcC----------------------------------------------------------
Confidence 8 68888665544333332221
Q ss_pred hhHHHHHHHHhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcC
Q psy3880 225 KQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNH 276 (408)
Q Consensus 225 ~~~~~~~~i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~H 276 (408)
..... + ...+++++++|.+||+.||++|||+.|++++
T Consensus 238 ------------~~~~~-~--~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 274 (277)
T cd05062 238 ------------GLLDK-P--DNCPDMLFELMRMCWQYNPKMRPSFLEIISS 274 (277)
T ss_pred ------------CcCCC-C--CCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 10000 0 2356789999999999999999999999864
No 267
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.96 E-value=8.7e-29 Score=240.74 Aligned_cols=197 Identities=26% Similarity=0.394 Sum_probs=148.3
Q ss_pred ccccCCcEEEEec-cCCcHHHHHHHHHhhchhhHHhhh------CCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEE
Q psy3880 6 MVAHSRVVVRVKE-EGDDLKHLAAQVVDKGEAAVQDII------NSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENIL 78 (408)
Q Consensus 6 ~~~~~~~i~~~~~-~~~~~~~lv~e~~~~g~~~l~~~~------~~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NIL 78 (408)
.+.|++++..... ..++..++|+||+.|. +.+.+ ....++..++.|++.||.|||+++++||||||+|||
T Consensus 71 ~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~---l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil 147 (308)
T cd06634 71 KLRHPNTIQYRGCYLREHTAWLVMEYCLGS---ASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNIL 147 (308)
T ss_pred hCCCCCcccEEEEEEcCCeeEEEEEccCCC---HHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEE
Confidence 4678876633322 4556778999999754 44333 245788999999999999999999999999999999
Q ss_pred EecCCCEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHH
Q psy3880 79 LDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMV 158 (408)
Q Consensus 79 l~~~~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~ 158 (408)
++.++.++|+|||++...... ....+++.|+|||.+.... ...++.++|+||+||++|+|++|..||...+...
T Consensus 148 ~~~~~~~kl~dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~~---~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~ 221 (308)
T cd06634 148 LSEPGLVKLGDFGSASIMAPA---NXFVGTPYWMAPEVILAMD---EGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS 221 (308)
T ss_pred ECCCCcEEECCcccceeecCc---ccccCCccccCHHHHhhcc---cCCCCcccchHHHHHHHHHHHcCCCCCccccHHH
Confidence 999999999999998765432 3457889999999985321 1346779999999999999999999986544332
Q ss_pred HHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCC
Q psy3880 159 MLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKY 238 (408)
Q Consensus 159 ~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~ 238 (408)
....+..+ ..|.
T Consensus 222 ~~~~~~~~---------------------------------------------------~~~~----------------- 233 (308)
T cd06634 222 ALYHIAQN---------------------------------------------------ESPA----------------- 233 (308)
T ss_pred HHHHHhhc---------------------------------------------------CCCC-----------------
Confidence 22222111 0000
Q ss_pred CCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCCC
Q psy3880 239 SFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKL 283 (408)
Q Consensus 239 ~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~~ 283 (408)
.. -...+..+++||++||..+|++|||++++++|||+....
T Consensus 234 -~~---~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~~~ 274 (308)
T cd06634 234 -LQ---SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRER 274 (308)
T ss_pred -cC---cccccHHHHHHHHHHhhCCcccCCCHHHHhhCccccccC
Confidence 00 124577899999999999999999999999999997753
No 268
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=99.96 E-value=6.3e-29 Score=234.97 Aligned_cols=189 Identities=22% Similarity=0.368 Sum_probs=142.9
Q ss_pred ccccCCcEEEEeccCCcHHHHHHHHHhhchhhHHhhhC-------CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEE
Q psy3880 6 MVAHSRVVVRVKEEGDDLKHLAAQVVDKGEAAVQDIIN-------SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENIL 78 (408)
Q Consensus 6 ~~~~~~~i~~~~~~~~~~~~lv~e~~~~g~~~l~~~~~-------~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NIL 78 (408)
.+.|++++..+....++..|++|||+.+|. |.+.+. +.+++..++.|++.||+|||++||+||||||+||+
T Consensus 57 ~l~~~~i~~~~~~~~~~~~~lv~e~~~~~~--L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nil 134 (260)
T cd05070 57 KLRHDKLVQLYAVVSEEPIYIVTEYMSKGS--LLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANIL 134 (260)
T ss_pred hcCCCceEEEEeEECCCCcEEEEEecCCCc--HHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEE
Confidence 478998664444445566789999999998 877663 34778999999999999999999999999999999
Q ss_pred EecCCCEEEeccccchhcccCccc--ccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHh-CCCCCCCch
Q psy3880 79 LDDQMNVKLTDFGFARVLKKGEKL--MDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPFWHRK 155 (408)
Q Consensus 79 l~~~~~iKl~DFGla~~~~~~~~~--~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~-G~~pf~~~~ 155 (408)
+++++.++|+|||++..+...... ....++..|+|||.+.. ..++.++|+|||||++|+|++ |.+||.+.+
T Consensus 135 i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~ 208 (260)
T cd05070 135 VGDGLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY------GRFTIKSDVWSFGILLTELVTKGRVPYPGMN 208 (260)
T ss_pred EeCCceEEeCCceeeeeccCcccccccCCCCCccccChHHHhc------CCCcchhhhHHHHHHHHHHHhcCCCCCCCCC
Confidence 999999999999999765443211 12334567999998754 346678899999999999888 778886554
Q ss_pred hHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHh
Q psy3880 156 QMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIME 235 (408)
Q Consensus 156 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~ 235 (408)
..+....+..
T Consensus 209 ~~~~~~~~~~---------------------------------------------------------------------- 218 (260)
T cd05070 209 NREVLEQVER---------------------------------------------------------------------- 218 (260)
T ss_pred HHHHHHHHHc----------------------------------------------------------------------
Confidence 4333332221
Q ss_pred cCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHc
Q psy3880 236 GKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALN 275 (408)
Q Consensus 236 ~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~ 275 (408)
+ ... +.....+.++++||.+||..||++|||+.++++
T Consensus 219 ~-~~~--~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 255 (260)
T cd05070 219 G-YRM--PCPQDCPISLHELMLQCWKKDPEERPTFEYLQS 255 (260)
T ss_pred C-CCC--CCCCcCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence 1 001 112356788999999999999999999998863
No 269
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.96 E-value=2e-29 Score=243.69 Aligned_cols=200 Identities=27% Similarity=0.485 Sum_probs=148.3
Q ss_pred ccccCCcEEEEe-ccCCcHHHHHHHHHhhchhhHHhhh----CCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEe
Q psy3880 6 MVAHSRVVVRVK-EEGDDLKHLAAQVVDKGEAAVQDII----NSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLD 80 (408)
Q Consensus 6 ~~~~~~~i~~~~-~~~~~~~~lv~e~~~~g~~~l~~~~----~~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl~ 80 (408)
.+.|++++..+. ....+..++||||+.++. |.+.+ .+...++.++.|++.||+|||++|++|+||||+||+++
T Consensus 73 ~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~--L~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~ 150 (292)
T cd06657 73 DYQHENVVEMYNSYLVGDELWVVMEFLEGGA--LTDIVTHTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLT 150 (292)
T ss_pred hcCCcchhheeeEEEeCCEEEEEEecCCCCc--HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC
Confidence 467887653332 244567789999999997 76664 24578899999999999999999999999999999999
Q ss_pred cCCCEEEeccccchhcccCc-ccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHHH
Q psy3880 81 DQMNVKLTDFGFARVLKKGE-KLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVM 159 (408)
Q Consensus 81 ~~~~iKl~DFGla~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~~ 159 (408)
.++.++|+|||++....... ......|++.|+|||.+.. ..++.++|+||+||++|+|++|..||.+......
T Consensus 151 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~pE~~~~------~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~ 224 (292)
T cd06657 151 HDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISR------LPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA 224 (292)
T ss_pred CCCCEEEcccccceecccccccccccccCccccCHHHhcC------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 99999999999887554322 1233578899999998753 2356678888888888888888887754332211
Q ss_pred HHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCCC
Q psy3880 160 LRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYS 239 (408)
Q Consensus 160 ~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~~ 239 (408)
...+......
T Consensus 225 ----------------------------------------------------------------------~~~~~~~~~~ 234 (292)
T cd06657 225 ----------------------------------------------------------------------MKMIRDNLPP 234 (292)
T ss_pred ----------------------------------------------------------------------HHHHHhhCCc
Confidence 1111111100
Q ss_pred CCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCCCC
Q psy3880 240 FSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLF 284 (408)
Q Consensus 240 f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~~~ 284 (408)
.......+++++.++|.+||..||.+|||+.++|+||||.....
T Consensus 235 -~~~~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~~~~~~~~~ 278 (292)
T cd06657 235 -KLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGP 278 (292)
T ss_pred -ccCCcccCCHHHHHHHHHHHhCCcccCcCHHHHhcChHHhccCC
Confidence 01112356889999999999999999999999999999987653
No 270
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.96 E-value=2.2e-29 Score=239.98 Aligned_cols=220 Identities=28% Similarity=0.435 Sum_probs=156.9
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC------CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcE
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN------SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENI 77 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~------~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NI 77 (408)
.+.|++++ .+.+ .+.+..++|+|++.+ . |.+.+. +...+..++.|++.||+|||++||+||||+|+||
T Consensus 54 ~~~~~~i~-~~~~~~~~~~~~~~v~e~~~~-~--l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni 129 (282)
T cd07829 54 ELKHPNIV-KLLDVIHTERKLYLVFEYCDM-D--LKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNI 129 (282)
T ss_pred hcCCCCHH-HHHhhhhcCCceEEEecCcCc-C--HHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheE
Confidence 34688755 4443 344678899999975 4 655553 4578899999999999999999999999999999
Q ss_pred EEecCCCEEEeccccchhcccCc-ccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchh
Q psy3880 78 LLDDQMNVKLTDFGFARVLKKGE-KLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQ 156 (408)
Q Consensus 78 Ll~~~~~iKl~DFGla~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~ 156 (408)
++++++.++|+|||++....... ......++..|+|||.+... ..++.++|+||+||+++++++|.+||.+.+.
T Consensus 130 ~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-----~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~ 204 (282)
T cd07829 130 LINRDGVLKLADFGLARAFGIPLRTYTHEVVTLWYRAPEILLGS-----KHYSTAVDIWSVGCIFAEMITGKPLFPGDSE 204 (282)
T ss_pred EEcCCCCEEEecCCcccccCCCccccCccccCcCcCChHHhcCC-----cCCCccccHHHHHHHHHHHHhCCCCCCCccH
Confidence 99999999999999987664432 22334567889999998642 3567899999999999999999999999887
Q ss_pred HHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhc
Q psy3880 157 MVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEG 236 (408)
Q Consensus 157 ~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~ 236 (408)
...+.++.+.........|.... -+. -.....|.+...
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~------------------------------~~~-~~~~~~~~~~~~----------- 242 (282)
T cd07829 205 IDQLFKIFQILGTPTEESWPGVT------------------------------KLP-DYKPTFPKFPPK----------- 242 (282)
T ss_pred HHHHHHHHHHhCCCcHHHHHhhc------------------------------ccc-cccccccccCcc-----------
Confidence 77777665432222111111100 000 000000100000
Q ss_pred CCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q psy3880 237 KYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFF 279 (408)
Q Consensus 237 ~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf 279 (408)
.....+..++.+++++|++||..||++|||++++++||||
T Consensus 243 ---~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~p~~ 282 (282)
T cd07829 243 ---DLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHPYF 282 (282)
T ss_pred ---chHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhCcCC
Confidence 0011123458899999999999999999999999999998
No 271
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=99.96 E-value=4.4e-29 Score=243.55 Aligned_cols=190 Identities=23% Similarity=0.304 Sum_probs=145.0
Q ss_pred ccccCCcEEEEeccCCcHHHHHHHHHhhchhhHHhhhCC------HHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEE
Q psy3880 6 MVAHSRVVVRVKEEGDDLKHLAAQVVDKGEAAVQDIINS------NPALRYIMRQLFEALEHVHNHSVVHRDLKPENILL 79 (408)
Q Consensus 6 ~~~~~~~i~~~~~~~~~~~~lv~e~~~~g~~~l~~~~~~------~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl 79 (408)
.+.|+|++..+.....+..++|+||+.+|. |.+.+.. ...+..++.||+.||+|||++||+||||||+|||+
T Consensus 65 ~l~h~niv~~~g~~~~~~~~~v~e~~~~g~--l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill 142 (316)
T cd05108 65 SVDNPHVCRLLGICLTSTVQLITQLMPFGC--LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLV 142 (316)
T ss_pred hCCCCCCCeEEEEEcCCCceeeeecCCCCC--HHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEe
Confidence 568998765444444456789999999998 8887643 35678889999999999999999999999999999
Q ss_pred ecCCCEEEeccccchhcccCcccc---cCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHh-CCCCCCCch
Q psy3880 80 DDQMNVKLTDFGFARVLKKGEKLM---DLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPFWHRK 155 (408)
Q Consensus 80 ~~~~~iKl~DFGla~~~~~~~~~~---~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~-G~~pf~~~~ 155 (408)
+.++.+||+|||+++.+....... ...++..|+|||.+.. ..++.++|+|||||++|++++ |..||.+..
T Consensus 143 ~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~apE~~~~------~~~~~~~Di~slGv~l~el~t~g~~p~~~~~ 216 (316)
T cd05108 143 KTPQHVKITDFGLAKLLGADEKEYHAEGGKVPIKWMALESILH------RIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 216 (316)
T ss_pred cCCCcEEEccccccccccCCCcceeccCCccceeecChHHhcc------CCCCchhhhHHHHHHHHHHHcCCCCCCCCCC
Confidence 999999999999998765433221 2334668999999864 457889999999999999997 999986644
Q ss_pred hHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHh
Q psy3880 156 QMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIME 235 (408)
Q Consensus 156 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~ 235 (408)
..+... +..
T Consensus 217 ~~~~~~-~~~---------------------------------------------------------------------- 225 (316)
T cd05108 217 ASEISS-ILE---------------------------------------------------------------------- 225 (316)
T ss_pred HHHHHH-HHh----------------------------------------------------------------------
Confidence 332211 111
Q ss_pred cCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcC
Q psy3880 236 GKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNH 276 (408)
Q Consensus 236 ~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~H 276 (408)
....++.+ ...+.++.++|.+||..||++|||+.+++.+
T Consensus 226 ~~~~~~~~--~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~ 264 (316)
T cd05108 226 KGERLPQP--PICTIDVYMIMVKCWMIDADSRPKFRELIIE 264 (316)
T ss_pred CCCCCCCC--CCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 11111111 2356788999999999999999999999986
No 272
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.96 E-value=5.6e-29 Score=238.23 Aligned_cols=189 Identities=18% Similarity=0.307 Sum_probs=144.3
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC---------------------CHHHHHHHHHHHHHHHHHH
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN---------------------SNPALRYIMRQLFEALEHV 62 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~---------------------~~~~~r~i~~qil~aL~~L 62 (408)
.+.|+++| .+.. +..+..++++||+.++. |.+.+. +...+..++.|++.||+||
T Consensus 64 ~l~h~~iv-~~~~~~~~~~~~~~~~e~~~~~~--l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~l 140 (283)
T cd05091 64 RLQHPNIV-CLLGVVTKEQPLSMIFSYCSHSD--LHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFL 140 (283)
T ss_pred cCCCCCcC-eEEEEEcCCCceEEEEEcCCCCc--HHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHH
Confidence 57799855 5443 44456788999998887 666652 3356788999999999999
Q ss_pred HHCCCeeccCCCCcEEEecCCCEEEeccccchhcccCcc---cccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhH
Q psy3880 63 HNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEK---LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGV 139 (408)
Q Consensus 63 H~~~IvHRDLKp~NILl~~~~~iKl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGv 139 (408)
|++||+||||||+|||+++++.+||+|||+++.+..... .....+++.|+|||.+.. ..++.++|+||+||
T Consensus 141 H~~gi~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~slG~ 214 (283)
T cd05091 141 SSHHVVHKDLATRNVLVFDKLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMY------GKFSIDSDIWSYGV 214 (283)
T ss_pred HHcCccccccchhheEecCCCceEecccccccccccchheeeccCccCCccccCHHHHhc------CCCCcchhHHHHHH
Confidence 999999999999999999999999999999886543321 123445778999999864 34678999999999
Q ss_pred HHHHHHh-CCCCCCCchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCC
Q psy3880 140 IMYTLLV-GCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGC 218 (408)
Q Consensus 140 il~~ll~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~ 218 (408)
++|+|++ |..||.+....+....+..+
T Consensus 215 ~l~el~~~g~~p~~~~~~~~~~~~i~~~---------------------------------------------------- 242 (283)
T cd05091 215 VLWEVFSYGLQPYCGYSNQDVIEMIRNR---------------------------------------------------- 242 (283)
T ss_pred HHHHHHcCCCCCCCCCCHHHHHHHHHcC----------------------------------------------------
Confidence 9999998 88888665544444443322
Q ss_pred CCCCCchhHHHHHHHHhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcC
Q psy3880 219 PPFWHRKQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNH 276 (408)
Q Consensus 219 ~Pf~~~~~~~~~~~i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~H 276 (408)
.... .-.+.+.++.+|+.+||+.||++|||+.++++.
T Consensus 243 ------------------~~~~---~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~ 279 (283)
T cd05091 243 ------------------QVLP---CPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSR 279 (283)
T ss_pred ------------------CcCC---CCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHH
Confidence 1110 012467789999999999999999999999864
No 273
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=99.96 E-value=6.7e-29 Score=234.22 Aligned_cols=188 Identities=23% Similarity=0.376 Sum_probs=146.1
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC------CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcE
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN------SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENI 77 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~------~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NI 77 (408)
.+.|++++ .+.+ +.++..++||||+.+|. |.+.+. +.+.+..++.|++.||+|||++||+||||||+||
T Consensus 55 ~l~h~~i~-~~~~~~~~~~~~~iv~e~~~~~~--L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni 131 (256)
T cd05114 55 KLSHPKLV-QLYGVCTQQKPLYIVTEFMENGC--LLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNC 131 (256)
T ss_pred HCCCCCce-eEEEEEccCCCEEEEEEcCCCCc--HHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceE
Confidence 35788755 4443 45567899999999998 777663 3477899999999999999999999999999999
Q ss_pred EEecCCCEEEeccccchhcccCcccc--cCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHh-CCCCCCCc
Q psy3880 78 LLDDQMNVKLTDFGFARVLKKGEKLM--DLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPFWHR 154 (408)
Q Consensus 78 Ll~~~~~iKl~DFGla~~~~~~~~~~--~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~-G~~pf~~~ 154 (408)
+++.++.+||+|||+++......... ...++..|+|||.+.. ..++.++|+||+||++|+|++ |..||...
T Consensus 132 ~i~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~s~G~~l~el~~~g~~p~~~~ 205 (256)
T cd05114 132 LVSSTGVVKVSDFGMTRYVLDDEYTSSSGAKFPVKWSPPEVFNF------SKYSSKSDVWSFGVLMWEVFTEGKMPFEKK 205 (256)
T ss_pred EEcCCCeEEECCCCCccccCCCceeccCCCCCchhhCChhhccc------CccchhhhhHHHHHHHHHHHcCCCCCCCCC
Confidence 99999999999999987654332221 2234567999999864 346789999999999999999 89999776
Q ss_pred hhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHH
Q psy3880 155 KQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIM 234 (408)
Q Consensus 155 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~ 234 (408)
+..+.+..+..+..
T Consensus 206 ~~~~~~~~i~~~~~------------------------------------------------------------------ 219 (256)
T cd05114 206 SNYEVVEMISRGFR------------------------------------------------------------------ 219 (256)
T ss_pred CHHHHHHHHHCCCC------------------------------------------------------------------
Confidence 66555555433210
Q ss_pred hcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHc
Q psy3880 235 EGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALN 275 (408)
Q Consensus 235 ~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~ 275 (408)
... + ...+.++.+||.+||..||++|||++|+++
T Consensus 220 ----~~~-~--~~~~~~~~~li~~c~~~~p~~Rps~~~l~~ 253 (256)
T cd05114 220 ----LYR-P--KLASMTVYEVMYSCWHEKPEGRPTFAELLR 253 (256)
T ss_pred ----CCC-C--CCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 000 0 124667899999999999999999999985
No 274
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.96 E-value=6.4e-29 Score=238.01 Aligned_cols=189 Identities=18% Similarity=0.360 Sum_probs=144.8
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC----------------------CHHHHHHHHHHHHHHHHH
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN----------------------SNPALRYIMRQLFEALEH 61 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~----------------------~~~~~r~i~~qil~aL~~ 61 (408)
.+.|+|+| .+.. ...+..++||||+.+|+ |.+++. +..++..++.|++.||.|
T Consensus 63 ~l~h~niv-~~~~~~~~~~~~~lv~e~~~~~~--L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~ 139 (283)
T cd05090 63 ELHHPNIV-CLLGVVTQEQPVCMLFEYLNQGD--LHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEY 139 (283)
T ss_pred hCCCCCee-eEEEEEecCCceEEEEEcCCCCc--HHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHH
Confidence 46788865 4443 45567899999999998 877762 335678899999999999
Q ss_pred HHHCCCeeccCCCCcEEEecCCCEEEeccccchhcccCc---ccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhh
Q psy3880 62 VHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGE---KLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACG 138 (408)
Q Consensus 62 LH~~~IvHRDLKp~NILl~~~~~iKl~DFGla~~~~~~~---~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlG 138 (408)
||++||+||||||+|||++.++.+||+|||+++...... ......++..|+|||.+.. ..++.++|+||+|
T Consensus 140 lH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~slG 213 (283)
T cd05090 140 LSSHFFVHKDLAARNILIGEQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMY------GKFSSDSDIWSFG 213 (283)
T ss_pred HHhcCeehhccccceEEEcCCCcEEeccccccccccCCcceecccCCCccceecChHHhcc------CCCCchhhhHHHH
Confidence 999999999999999999999999999999997654322 1223455678999998864 3467899999999
Q ss_pred HHHHHHHh-CCCCCCCchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcC
Q psy3880 139 VIMYTLLV-GCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVG 217 (408)
Q Consensus 139 vil~~ll~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g 217 (408)
|++|+|++ |..||.+.+.......+..+
T Consensus 214 ~il~el~~~g~~p~~~~~~~~~~~~~~~~--------------------------------------------------- 242 (283)
T cd05090 214 VVLWEIFSFGLQPYYGFSNQEVIEMVRKR--------------------------------------------------- 242 (283)
T ss_pred HHHHHHHcCCCCCCCCCCHHHHHHHHHcC---------------------------------------------------
Confidence 99999998 88888665443333322211
Q ss_pred CCCCCCchhHHHHHHHHhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcC
Q psy3880 218 CPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNH 276 (408)
Q Consensus 218 ~~Pf~~~~~~~~~~~i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~H 276 (408)
. .. +.+..++++++++|.+||+.||++||++.+++++
T Consensus 243 -------------------~-~~--~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~ 279 (283)
T cd05090 243 -------------------Q-LL--PCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTR 279 (283)
T ss_pred -------------------C-cC--CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence 0 00 1123467889999999999999999999999875
No 275
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.96 E-value=3.8e-29 Score=240.42 Aligned_cols=202 Identities=25% Similarity=0.387 Sum_probs=146.9
Q ss_pred ccccCCcEEEEec----cCCcHHHHHHHHHhhchhhHHhhhC---------CHHHHHHHHHHHHHHHHHHHHCCCeeccC
Q psy3880 6 MVAHSRVVVRVKE----EGDDLKHLAAQVVDKGEAAVQDIIN---------SNPALRYIMRQLFEALEHVHNHSVVHRDL 72 (408)
Q Consensus 6 ~~~~~~~i~~~~~----~~~~~~~lv~e~~~~g~~~l~~~~~---------~~~~~r~i~~qil~aL~~LH~~~IvHRDL 72 (408)
.+.|+|++ .+.+ +..+..|+||||+.||. |.+.+. +...+..++.||+.||.|||+.|++|+||
T Consensus 55 ~l~h~~iv-~~~~~~~~~~~~~~~lv~e~~~~~~--L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl 131 (287)
T cd06621 55 SCKSPYIV-KYYGAFLDESSSSIGIAMEYCEGGS--LDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDI 131 (287)
T ss_pred hCCCCCee-eeeeEEEccCCCeEEEEEEecCCCC--HHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCC
Confidence 46888855 5433 34456799999999997 655432 34678899999999999999999999999
Q ss_pred CCCcEEEecCCCEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCC
Q psy3880 73 KPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFW 152 (408)
Q Consensus 73 Kp~NILl~~~~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~ 152 (408)
+|+||+++.++.++|+|||++....... .....++..|+|||.+.. ..++.++|+||+||++|+|++|..||.
T Consensus 132 ~~~nil~~~~~~~~l~dfg~~~~~~~~~-~~~~~~~~~y~~pE~~~~------~~~~~~~Dv~slG~il~~l~~g~~p~~ 204 (287)
T cd06621 132 KPSNILLTRKGQVKLCDFGVSGELVNSL-AGTFTGTSFYMAPERIQG------KPYSITSDVWSLGLTLLEVAQNRFPFP 204 (287)
T ss_pred CHHHEEEecCCeEEEeeccccccccccc-cccccCCccccCHHHhcC------CCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 9999999999999999999987654322 224567889999998864 346788999999999999999999985
Q ss_pred CchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHH
Q psy3880 153 HRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRN 232 (408)
Q Consensus 153 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~ 232 (408)
..... .. ...+....
T Consensus 205 ~~~~~---------------------------------------------~~--------------------~~~~~~~~ 219 (287)
T cd06621 205 PEGEP---------------------------------------------PL--------------------GPIELLSY 219 (287)
T ss_pred cccCC---------------------------------------------CC--------------------ChHHHHHH
Confidence 43210 00 00011111
Q ss_pred HHhcCC-CCCC--CcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q psy3880 233 IMEGKY-SFSS--PEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPK 282 (408)
Q Consensus 233 i~~~~~-~f~~--~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~ 282 (408)
+..... .... ..-...++++++||.+||..||++|||+.|++.||||...
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~~~~~ 272 (287)
T cd06621 220 IVNMPNPELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWIKAQ 272 (287)
T ss_pred HhcCCchhhccCCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhCcccccc
Confidence 111000 0000 0001246789999999999999999999999999999543
No 276
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.96 E-value=1e-28 Score=240.91 Aligned_cols=195 Identities=26% Similarity=0.418 Sum_probs=145.5
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhh------CCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcE
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDII------NSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENI 77 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~------~~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NI 77 (408)
.+.|++++ .+.+ .+++..|+||||+.|. +.+.+ .+..++..++.||+.||.|||++||+|+||||+||
T Consensus 77 ~l~h~~iv-~~~~~~~~~~~~~lv~e~~~~~---l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~ni 152 (313)
T cd06633 77 QLKHPNTI-EYKGCYLKEHTAWLVMEYCLGS---ASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNI 152 (313)
T ss_pred hCCCCCCc-cEEEEEEeCCEEEEEEecCCCC---HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhE
Confidence 45788765 4443 4556678999999754 33333 24478888999999999999999999999999999
Q ss_pred EEecCCCEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhH
Q psy3880 78 LLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 157 (408)
Q Consensus 78 Ll~~~~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~ 157 (408)
+++.++.+||+|||++..... .....|+..|+|||++.... ...++.++|+||+||++|+|++|..||.+.+..
T Consensus 153 li~~~~~~kL~dfg~~~~~~~---~~~~~~~~~y~aPE~~~~~~---~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~ 226 (313)
T cd06633 153 LLTEPGQVKLADFGSASKSSP---ANSFVGTPYWMAPEVILAMD---EGQYDGKVDVWSLGITCIELAERKPPLFNMNAM 226 (313)
T ss_pred EECCCCCEEEeecCCCcccCC---CCCccccccccChhhccccC---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCChH
Confidence 999999999999999864322 23467889999999974311 134677889999999999998888888665443
Q ss_pred HHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcC
Q psy3880 158 VMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 237 (408)
Q Consensus 158 ~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~ 237 (408)
.....+... .
T Consensus 227 ~~~~~~~~~----------------------------------------------------------------------~ 236 (313)
T cd06633 227 SALYHIAQN----------------------------------------------------------------------D 236 (313)
T ss_pred HHHHHHHhc----------------------------------------------------------------------C
Confidence 333322211 0
Q ss_pred CCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q psy3880 238 YSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPK 282 (408)
Q Consensus 238 ~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~ 282 (408)
. +.......+..+++||.+||+.||.+|||+.++++||||...
T Consensus 237 ~--~~~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~~~~~~~ 279 (313)
T cd06633 237 S--PTLQSNEWTDSFRGFVDYCLQKIPQERPASAELLRHDFVRRD 279 (313)
T ss_pred C--CCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCcccCCC
Confidence 0 001112356779999999999999999999999999999864
No 277
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=99.96 E-value=7.4e-29 Score=234.13 Aligned_cols=189 Identities=21% Similarity=0.351 Sum_probs=143.1
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC------CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcE
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN------SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENI 77 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~------~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NI 77 (408)
.+.|++++ .+.+ +..+..|+||||+.||. |.+.+. +.+.+..++.||+.||.|||++||+||||||+||
T Consensus 55 ~l~~~~i~-~~~~~~~~~~~~~lv~e~~~~~~--L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni 131 (256)
T cd05059 55 KLSHPNLV-QLYGVCTKQRPIFIVTEYMANGC--LLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNC 131 (256)
T ss_pred hCCCCCEE-EEEEEEcCCCceEEEEecCCCCC--HHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhE
Confidence 47898855 4443 45567899999999998 877763 3468899999999999999999999999999999
Q ss_pred EEecCCCEEEeccccchhcccCcccc--cCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHh-CCCCCCCc
Q psy3880 78 LLDDQMNVKLTDFGFARVLKKGEKLM--DLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPFWHR 154 (408)
Q Consensus 78 Ll~~~~~iKl~DFGla~~~~~~~~~~--~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~-G~~pf~~~ 154 (408)
+++.++.+||+|||+++......... ...++..|+|||.+.. ..++.++|+||+||++|++++ |..||...
T Consensus 132 ~i~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~------~~~~~~~Di~slG~il~~l~~~g~~p~~~~ 205 (256)
T cd05059 132 LVGEDNVVKVSDFGLARYVLDDQYTSSQGTKFPVKWAPPEVFDY------SRFSSKSDVWSFGVLMWEVFSEGKMPYERF 205 (256)
T ss_pred EECCCCcEEECCcccceecccccccccCCCCCCccccCHHHhcc------CCCCchhhHHHHHHHHHHHhccCCCCCCCC
Confidence 99999999999999987654332111 1223347999999864 346788999999999999998 78888654
Q ss_pred hhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHH
Q psy3880 155 KQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIM 234 (408)
Q Consensus 155 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~ 234 (408)
+..+....+..
T Consensus 206 ~~~~~~~~~~~--------------------------------------------------------------------- 216 (256)
T cd05059 206 SNSEVVESVSA--------------------------------------------------------------------- 216 (256)
T ss_pred CHHHHHHHHHc---------------------------------------------------------------------
Confidence 44333322211
Q ss_pred hcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcC
Q psy3880 235 EGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNH 276 (408)
Q Consensus 235 ~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~H 276 (408)
+ ... +.....|+++.+++.+||..||++|||+.|+++.
T Consensus 217 -~-~~~--~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~ 254 (256)
T cd05059 217 -G-YRL--YRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQ 254 (256)
T ss_pred -C-CcC--CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence 1 000 1112468899999999999999999999999864
No 278
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.96 E-value=5e-29 Score=272.13 Aligned_cols=141 Identities=17% Similarity=0.233 Sum_probs=101.9
Q ss_pred ccccccccCCcEEEEec---------cCCcHHHHHHHHHhhchhhHHhhhC------CHHHHHHHHHHHHHHHHHHHHCC
Q psy3880 2 EKGEMVAHSRVVVRVKE---------EGDDLKHLAAQVVDKGEAAVQDIIN------SNPALRYIMRQLFEALEHVHNHS 66 (408)
Q Consensus 2 ~~~~~~~~~~~i~~~~~---------~~~~~~~lv~e~~~~g~~~l~~~~~------~~~~~r~i~~qil~aL~~LH~~~ 66 (408)
+|-..+.|.++|+.+.+ ..++.+.+++|++ ++. |.+++. +..+++.+++||+.||+|||++|
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~--L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~g 100 (793)
T PLN00181 24 DGSKSLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVS--LRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQG 100 (793)
T ss_pred CccchhhHHHHHHHhhcccCCccccccccchhhhhhccC-Ccc--HHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCC
Confidence 34456778666765443 2345678888876 445 888773 34789999999999999999999
Q ss_pred CeeccCCCCcEEEec-------------------CCCEEEeccccchhcccCc-----------------ccccCCCCCc
Q psy3880 67 VVHRDLKPENILLDD-------------------QMNVKLTDFGFARVLKKGE-----------------KLMDLCGTPG 110 (408)
Q Consensus 67 IvHRDLKp~NILl~~-------------------~~~iKl~DFGla~~~~~~~-----------------~~~~~~gt~~ 110 (408)
||||||||+|||++. ++.+|++|||+++...... .....+||++
T Consensus 101 IvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 180 (793)
T PLN00181 101 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSW 180 (793)
T ss_pred eeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcc
Confidence 999999999999954 3456677777765421100 0012468888
Q ss_pred ccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCC
Q psy3880 111 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151 (408)
Q Consensus 111 y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf 151 (408)
|+|||++.+ ..|+.++|||||||++|||++|.+|+
T Consensus 181 Y~APE~~~~------~~~~~~sDVwSlGviL~ELl~~~~~~ 215 (793)
T PLN00181 181 YTSPEEDNG------SSSNCASDVYRLGVLLFELFCPVSSR 215 (793)
T ss_pred eEChhhhcc------CCCCchhhhhhHHHHHHHHhhCCCch
Confidence 999998864 34677888888888888888877765
No 279
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=99.96 E-value=6e-29 Score=235.67 Aligned_cols=188 Identities=22% Similarity=0.362 Sum_probs=142.1
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC-------CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCc
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN-------SNPALRYIMRQLFEALEHVHNHSVVHRDLKPEN 76 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~-------~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~N 76 (408)
.+.|++++ ++.. ..++..++||||+.+|. |.+.+. +...+..++.|++.||+|||++|++||||||+|
T Consensus 58 ~l~h~~i~-~~~~~~~~~~~~~lv~e~~~~~~--L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~n 134 (263)
T cd05052 58 EIKHPNLV-QLLGVCTREPPFYIITEFMTYGN--LLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARN 134 (263)
T ss_pred hCCCCChh-heEEEEcCCCCcEEEEEeCCCCc--HHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcce
Confidence 36788765 4443 45567889999999998 777653 236778899999999999999999999999999
Q ss_pred EEEecCCCEEEeccccchhcccCcccc--cCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHh-CCCCCCC
Q psy3880 77 ILLDDQMNVKLTDFGFARVLKKGEKLM--DLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPFWH 153 (408)
Q Consensus 77 ILl~~~~~iKl~DFGla~~~~~~~~~~--~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~-G~~pf~~ 153 (408)
||+++++.+||+|||++.......... ...+++.|+|||.+.. ..++.++|+|||||++|+|++ |..||.+
T Consensus 135 il~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~slG~il~el~t~g~~p~~~ 208 (263)
T cd05052 135 CLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY------NKFSIKSDVWAFGVLLWEIATYGMSPYPG 208 (263)
T ss_pred EEEcCCCcEEeCCCccccccccceeeccCCCCCccccCCHHHhcc------CCCCchhHHHHHHHHHHHHHcCCCCCCCC
Confidence 999999999999999998765432211 2234567999998864 346778999999999999997 8888866
Q ss_pred chhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHH
Q psy3880 154 RKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI 233 (408)
Q Consensus 154 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i 233 (408)
.+..+....+..+
T Consensus 209 ~~~~~~~~~~~~~------------------------------------------------------------------- 221 (263)
T cd05052 209 IDLSQVYELLEKG------------------------------------------------------------------- 221 (263)
T ss_pred CCHHHHHHHHHCC-------------------------------------------------------------------
Confidence 5443332222111
Q ss_pred HhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHc
Q psy3880 234 MEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALN 275 (408)
Q Consensus 234 ~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~ 275 (408)
+.. +.-..++.++.+||.+||..||++|||+.++++
T Consensus 222 ----~~~--~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~ 257 (263)
T cd05052 222 ----YRM--ERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQ 257 (263)
T ss_pred ----CCC--CCCCCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 011 111346889999999999999999999999875
No 280
>KOG1027|consensus
Probab=99.96 E-value=1.2e-29 Score=262.01 Aligned_cols=191 Identities=34% Similarity=0.537 Sum_probs=141.2
Q ss_pred ccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhCCH---------HHHHHHHHHHHHHHHHHHHCCCeeccCCCCc
Q psy3880 8 AHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIINSN---------PALRYIMRQLFEALEHVHNHSVVHRDLKPEN 76 (408)
Q Consensus 8 ~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~~~---------~~~r~i~~qil~aL~~LH~~~IvHRDLKp~N 76 (408)
+|+|+| |++- .++.+.||+.|+|.-. |.|.+... -..+.++.|++.||++||+.+||||||||.|
T Consensus 561 ~H~Nvi-Ryyc~E~d~qF~YIalELC~~s---L~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQN 636 (903)
T KOG1027|consen 561 EHPNVI-RYYCSEQDRQFLYIALELCACS---LQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQN 636 (903)
T ss_pred CCCceE-EEEeeccCCceEEEEehHhhhh---HHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCce
Confidence 689855 7663 4556789999999743 77777551 3458899999999999999999999999999
Q ss_pred EEEec---C--CCEEEeccccchhcccCcc----cccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhC
Q psy3880 77 ILLDD---Q--MNVKLTDFGFARVLKKGEK----LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVG 147 (408)
Q Consensus 77 ILl~~---~--~~iKl~DFGla~~~~~~~~----~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G 147 (408)
|||+. + ..++|+|||+++.+..+.. ..+..||-+|+|||++.... -..++||+|+||++|+.++|
T Consensus 637 ILI~~~~~~~~~ra~iSDfglsKkl~~~~sS~~r~s~~sGt~GW~APE~L~~~~------~~~avDiFslGCvfyYvltg 710 (903)
T KOG1027|consen 637 ILISVPSADGTLRAKISDFGLSKKLAGGKSSFSRLSGGSGTSGWQAPEQLREDR------KTQAVDIFSLGCVFYYVLTG 710 (903)
T ss_pred EEEEccCCCcceeEEecccccccccCCCcchhhcccCCCCcccccCHHHHhccc------cCcccchhhcCceEEEEecC
Confidence 99976 3 3689999999998876542 34578999999999997642 23467777777777776664
Q ss_pred -CCCCCCchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchh
Q psy3880 148 -CPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQ 226 (408)
Q Consensus 148 -~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~ 226 (408)
..||-+..
T Consensus 711 G~HpFGd~~----------------------------------------------------------------------- 719 (903)
T KOG1027|consen 711 GSHPFGDSL----------------------------------------------------------------------- 719 (903)
T ss_pred CccCCCchH-----------------------------------------------------------------------
Confidence 55663322
Q ss_pred HHHHHHHHhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCC
Q psy3880 227 MVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHP 281 (408)
Q Consensus 227 ~~~~~~i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~ 281 (408)
+...+|+.+++....-+- .-..+|+|||.+||..||..||||.++|+||+|-.
T Consensus 720 -~R~~NIl~~~~~L~~L~~-~~d~eA~dLI~~ml~~dP~~RPsa~~VL~HPlFW~ 772 (903)
T KOG1027|consen 720 -ERQANILTGNYTLVHLEP-LPDCEAKDLISRMLNPDPQLRPSATDVLNHPLFWD 772 (903)
T ss_pred -HhhhhhhcCccceeeecc-CchHHHHHHHHHhcCCCcccCCCHHHHhCCCccCC
Confidence 122345555554322110 00118999999999999999999999999999964
No 281
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=99.96 E-value=6e-29 Score=235.43 Aligned_cols=189 Identities=20% Similarity=0.328 Sum_probs=144.2
Q ss_pred ccccCCcEEEEeccCCcHHHHHHHHHhhchhhHHhhhC------CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEE
Q psy3880 6 MVAHSRVVVRVKEEGDDLKHLAAQVVDKGEAAVQDIIN------SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILL 79 (408)
Q Consensus 6 ~~~~~~~i~~~~~~~~~~~~lv~e~~~~g~~~l~~~~~------~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl 79 (408)
++.|+++|..+.....+..++||||+.+|. |.+.+. +..++..++.|++.||+|||++|++||||||+|||+
T Consensus 51 ~l~h~~ii~~~~~~~~~~~~lv~e~~~~~~--L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~ 128 (257)
T cd05115 51 QLDNPYIVRMIGVCEAEALMLVMEMASGGP--LNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLL 128 (257)
T ss_pred hcCCCCeEEEEEEEcCCCeEEEEEeCCCCC--HHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEE
Confidence 478998664443334456789999999998 777653 347889999999999999999999999999999999
Q ss_pred ecCCCEEEeccccchhcccCccc----ccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHh-CCCCCCCc
Q psy3880 80 DDQMNVKLTDFGFARVLKKGEKL----MDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPFWHR 154 (408)
Q Consensus 80 ~~~~~iKl~DFGla~~~~~~~~~----~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~-G~~pf~~~ 154 (408)
+.++.+||+|||++..+...... ....+++.|+|||.+.. ..++.++|+|||||++|++++ |..||.+.
T Consensus 129 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~~l~el~~~g~~p~~~~ 202 (257)
T cd05115 129 VNQHYAKISDFGLSKALGADDSYYKARSAGKWPLKWYAPECINF------RKFSSRSDVWSYGITMWEAFSYGQKPYKKM 202 (257)
T ss_pred cCCCcEEeccCCccccccCCccceeccCCCCCCcccCCHHHHcc------CCCCchhhHHHHHHHHHHHhcCCCCCcCcC
Confidence 99999999999999765433221 11223568999998864 346789999999999999996 99999765
Q ss_pred hhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHH
Q psy3880 155 KQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIM 234 (408)
Q Consensus 155 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~ 234 (408)
+.......+..+. .
T Consensus 203 ~~~~~~~~~~~~~---------------------------------------------------~--------------- 216 (257)
T cd05115 203 KGPEVMSFIEQGK---------------------------------------------------R--------------- 216 (257)
T ss_pred CHHHHHHHHHCCC---------------------------------------------------C---------------
Confidence 5444333332221 0
Q ss_pred hcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHc
Q psy3880 235 EGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALN 275 (408)
Q Consensus 235 ~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~ 275 (408)
..++ ...++++++||.+|+..||++|||+.++.+
T Consensus 217 ---~~~~----~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~ 250 (257)
T cd05115 217 ---LDCP----AECPPEMYALMKDCWIYKWEDRPNFAKVEE 250 (257)
T ss_pred ---CCCC----CCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 0011 235789999999999999999999998865
No 282
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.96 E-value=4.8e-29 Score=239.20 Aligned_cols=207 Identities=24% Similarity=0.359 Sum_probs=151.4
Q ss_pred ccccCCcEEEEec-cCCcHHHHHHHHHhhchhhHHhhhC-----CHHHHHHHHHHHHHHHHHHHH-CCCeeccCCCCcEE
Q psy3880 6 MVAHSRVVVRVKE-EGDDLKHLAAQVVDKGEAAVQDIIN-----SNPALRYIMRQLFEALEHVHN-HSVVHRDLKPENIL 78 (408)
Q Consensus 6 ~~~~~~~i~~~~~-~~~~~~~lv~e~~~~g~~~l~~~~~-----~~~~~r~i~~qil~aL~~LH~-~~IvHRDLKp~NIL 78 (408)
.+.|++++..+.. ...+..++|+||+.+|. |.+.+. +...++.++.|++.||.|||+ ++++||||||+||+
T Consensus 59 ~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~--L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil 136 (284)
T cd06620 59 ECRSPYIVSFYGAFLNENNICMCMEFMDCGS--LDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNIL 136 (284)
T ss_pred HcCCCCcceEeeeEecCCEEEEEEecCCCCC--HHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEE
Confidence 4678886644432 34466789999999998 766553 347889999999999999997 69999999999999
Q ss_pred EecCCCEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHH
Q psy3880 79 LDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMV 158 (408)
Q Consensus 79 l~~~~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~ 158 (408)
+++++.++|+|||++....... ....+|+..|+|||++.. ..++.++|+||+||++|++++|..||.......
T Consensus 137 ~~~~~~~~l~d~gl~~~~~~~~-~~~~~~~~~~~aPE~~~~------~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~ 209 (284)
T cd06620 137 VNSRGQIKLCDFGVSGELINSI-ADTFVGTSTYMSPERIQG------GKYTVKSDVWSLGISIIELALGKFPFAFSNIDD 209 (284)
T ss_pred ECCCCcEEEccCCcccchhhhc-cCccccCcccCCHHHHcc------CCCCccchHHHHHHHHHHHHhCCCCCcccchhh
Confidence 9999999999999987553321 234678999999999864 356789999999999999999999997644321
Q ss_pred HHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCC
Q psy3880 159 MLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKY 238 (408)
Q Consensus 159 ~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~ 238 (408)
.... .+ .........+.....
T Consensus 210 ~~~~--------------------~~---------------------------------------~~~~~~~~~~~~~~~ 230 (284)
T cd06620 210 DGQD--------------------DP---------------------------------------MGILDLLQQIVQEPP 230 (284)
T ss_pred hhhh--------------------hh---------------------------------------hHHHHHHHHHhhccC
Confidence 0000 00 000011111211110
Q ss_pred CCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q psy3880 239 SFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPK 282 (408)
Q Consensus 239 ~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~ 282 (408)
. ...+..++.++.+||.+||+.||++|||++|+++||||...
T Consensus 231 ~--~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~~ 272 (284)
T cd06620 231 P--RLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQA 272 (284)
T ss_pred C--CCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccc
Confidence 0 01112367889999999999999999999999999999664
No 283
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.96 E-value=2.4e-28 Score=238.59 Aligned_cols=195 Identities=28% Similarity=0.453 Sum_probs=148.2
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhh------CCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcE
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDII------NSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENI 77 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~------~~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NI 77 (408)
.+.|+|+| .+.+ ..++..++||||+.|. +.+.+ .+..++..++.|++.||.|||++||+||||+|+||
T Consensus 81 ~l~h~~iv-~~~~~~~~~~~~~lv~e~~~g~---l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Ni 156 (317)
T cd06635 81 RIKHPNSI-EYKGCYLREHTAWLVMEYCLGS---ASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNI 156 (317)
T ss_pred hCCCCCEE-EEEEEEeeCCeEEEEEeCCCCC---HHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccE
Confidence 35788755 4443 3556678999999764 44433 23478888999999999999999999999999999
Q ss_pred EEecCCCEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhH
Q psy3880 78 LLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 157 (408)
Q Consensus 78 Ll~~~~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~ 157 (408)
+++.++.+||+|||++...... ....|++.|+|||.+... ....++.++|+||+||++|+|++|..||...+..
T Consensus 157 l~~~~~~~kl~dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~---~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~ 230 (317)
T cd06635 157 LLTEPGQVKLADFGSASIASPA---NSFVGTPYWMAPEVILAM---DEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM 230 (317)
T ss_pred EECCCCCEEEecCCCccccCCc---ccccCCccccChhhhhcC---CCCCCCccccHHHHHHHHHHHHhCCCCCCCccHH
Confidence 9999999999999998754332 345788999999997531 1234678999999999999999999998765443
Q ss_pred HHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcC
Q psy3880 158 VMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 237 (408)
Q Consensus 158 ~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~ 237 (408)
..+..+..+. .
T Consensus 231 ~~~~~~~~~~---------------------------------------------------------------------~ 241 (317)
T cd06635 231 SALYHIAQNE---------------------------------------------------------------------S 241 (317)
T ss_pred HHHHHHHhcc---------------------------------------------------------------------C
Confidence 3333332210 0
Q ss_pred CCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q psy3880 238 YSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPK 282 (408)
Q Consensus 238 ~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~ 282 (408)
... .....++.+++||.+||+.||.+|||+.++++|||+...
T Consensus 242 ~~~---~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~ 283 (317)
T cd06635 242 PTL---QSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLRE 283 (317)
T ss_pred CCC---CCccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhcc
Confidence 001 112357789999999999999999999999999999654
No 284
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=99.96 E-value=1.4e-29 Score=239.49 Aligned_cols=199 Identities=26% Similarity=0.427 Sum_probs=148.1
Q ss_pred cccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC------CHHHHHHHHHHHHHHHHHHHH-CCCeeccCCCCcE
Q psy3880 7 VAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN------SNPALRYIMRQLFEALEHVHN-HSVVHRDLKPENI 77 (408)
Q Consensus 7 ~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~------~~~~~r~i~~qil~aL~~LH~-~~IvHRDLKp~NI 77 (408)
+.|+|++ .+.. ..++..++++|++.++. |.+.+. ++..+..++.|++.||+|||+ .|++|+||||+||
T Consensus 56 ~~~~~i~-~~~~~~~~~~~~~lv~e~~~~~~--L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni 132 (265)
T cd06605 56 CNSPYIV-GFYGAFYNNGDISICMEYMDGGS--LDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNI 132 (265)
T ss_pred CCCCchh-hhheeeecCCEEEEEEEecCCCc--HHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHE
Confidence 4688755 4433 34467789999999887 777664 347788899999999999999 9999999999999
Q ss_pred EEecCCCEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhH
Q psy3880 78 LLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 157 (408)
Q Consensus 78 Ll~~~~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~ 157 (408)
+++.++.++|+|||++........ ....++..|+|||.+.. ..++.++|+||+||++|++++|..||......
T Consensus 133 ~~~~~~~~~l~d~g~~~~~~~~~~-~~~~~~~~y~~PE~~~~------~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~ 205 (265)
T cd06605 133 LVNSRGQIKLCDFGVSGQLVNSLA-KTFVGTSSYMAPERIQG------NDYSVKSDIWSLGLSLIELATGRFPYPPENDP 205 (265)
T ss_pred EECCCCCEEEeecccchhhHHHHh-hcccCChhccCHHHHcC------CCCCchhhHHHHHHHHHHHHhCCCCCCccccc
Confidence 999999999999999876643322 22678899999999864 35678899999999999999998888542210
Q ss_pred HHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcC
Q psy3880 158 VMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 237 (408)
Q Consensus 158 ~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~ 237 (408)
........+.+....
T Consensus 206 -----------------------------------------------------------------~~~~~~~~~~~~~~~ 220 (265)
T cd06605 206 -----------------------------------------------------------------PDGIFELLQYIVNEP 220 (265)
T ss_pred -----------------------------------------------------------------cccHHHHHHHHhcCC
Confidence 000111222222221
Q ss_pred CCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q psy3880 238 YSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPK 282 (408)
Q Consensus 238 ~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~ 282 (408)
..- .....+|+++++||.+||..||++|||+.|++.||||+..
T Consensus 221 ~~~--~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~~~~ 263 (265)
T cd06605 221 PPR--LPSGKFSPDFQDFVNLCLIKDPRERPSYKELLEHPFIKKY 263 (265)
T ss_pred CCC--CChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhCchhhcc
Confidence 110 0111278899999999999999999999999999999753
No 285
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=99.96 E-value=7.7e-29 Score=236.03 Aligned_cols=186 Identities=22% Similarity=0.354 Sum_probs=139.3
Q ss_pred ccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC---------------------CHHHHHHHHHHHHHHHHHHHH
Q psy3880 8 AHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN---------------------SNPALRYIMRQLFEALEHVHN 64 (408)
Q Consensus 8 ~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~---------------------~~~~~r~i~~qil~aL~~LH~ 64 (408)
.|+++| ++.+ +.++..|+||||+.+|. |.+.+. +.+++..++.|++.||+|||+
T Consensus 54 ~h~~iv-~~~~~~~~~~~~~lv~e~~~~~~--L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~ 130 (270)
T cd05047 54 HHPNII-NLLGACEHRGYLYLAIEYAPHGN--LLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ 130 (270)
T ss_pred cCCCee-eEEEEEecCCCceEEEEeCCCCc--HHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 577744 5543 45567899999999998 877663 346789999999999999999
Q ss_pred CCCeeccCCCCcEEEecCCCEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHH
Q psy3880 65 HSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTL 144 (408)
Q Consensus 65 ~~IvHRDLKp~NILl~~~~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~l 144 (408)
+|++||||||+|||++.++.+||+|||++..............++.|+|||++.. ..++.++|+|||||++|+|
T Consensus 131 ~~i~H~dikp~nili~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~y~apE~~~~------~~~~~~~Di~slG~il~el 204 (270)
T cd05047 131 KQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNY------SVYTTNSDVWSYGVLLWEI 204 (270)
T ss_pred CCEeecccccceEEEcCCCeEEECCCCCccccchhhhccCCCCccccCChHHHcc------CCCCchhhHHHHHHHHHHH
Confidence 9999999999999999999999999999864322111112234567999998854 3467889999999999999
Q ss_pred Hh-CCCCCCCchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCC
Q psy3880 145 LV-GCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH 223 (408)
Q Consensus 145 l~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~ 223 (408)
++ |..||.+.+.......+..
T Consensus 205 ~~~g~~pf~~~~~~~~~~~~~~---------------------------------------------------------- 226 (270)
T cd05047 205 VSLGGTPYCGMTCAELYEKLPQ---------------------------------------------------------- 226 (270)
T ss_pred HcCCCCCccccCHHHHHHHHhC----------------------------------------------------------
Confidence 96 8888865543333322211
Q ss_pred chhHHHHHHHHhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHc
Q psy3880 224 RKQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALN 275 (408)
Q Consensus 224 ~~~~~~~~~i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~ 275 (408)
+ +.. +....++.++.+||.+||..||.+|||+.|+++
T Consensus 227 ------------~-~~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 263 (270)
T cd05047 227 ------------G-YRL--EKPLNCDDEVYDLMRQCWREKPYERPSFAQILV 263 (270)
T ss_pred ------------C-CCC--CCCCcCCHHHHHHHHHHcccChhhCCCHHHHHH
Confidence 0 000 111246778999999999999999999999975
No 286
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=99.96 E-value=7.6e-29 Score=237.00 Aligned_cols=189 Identities=22% Similarity=0.292 Sum_probs=141.2
Q ss_pred ccccCCcEEEEeccCCcHHHHHHHHHhhchhhHHhhhC------CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEE
Q psy3880 6 MVAHSRVVVRVKEEGDDLKHLAAQVVDKGEAAVQDIIN------SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILL 79 (408)
Q Consensus 6 ~~~~~~~i~~~~~~~~~~~~lv~e~~~~g~~~l~~~~~------~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl 79 (408)
.+.|++++..+....+...++++|++.+|. |.+.+. +..++..++.||+.||+|||+++|+||||||+|||+
T Consensus 65 ~~~~~~i~~~~~~~~~~~~~l~~~~~~~g~--l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~ 142 (279)
T cd05109 65 GVGSPYVCRLLGICLTSTVQLVTQLMPYGC--LLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLV 142 (279)
T ss_pred hcCCCCCceEEEEEcCCCcEEEEEcCCCCC--HHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEE
Confidence 356887654443344456789999999998 777763 336788899999999999999999999999999999
Q ss_pred ecCCCEEEeccccchhcccCcccc---cCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHh-CCCCCCCch
Q psy3880 80 DDQMNVKLTDFGFARVLKKGEKLM---DLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPFWHRK 155 (408)
Q Consensus 80 ~~~~~iKl~DFGla~~~~~~~~~~---~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~-G~~pf~~~~ 155 (408)
++++.+||+|||+++.+....... ...+++.|+|||.+.. ..++.++|+||+||++|+|++ |..||....
T Consensus 143 ~~~~~~kL~dfG~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~------~~~~~~~Di~slG~~l~el~t~g~~p~~~~~ 216 (279)
T cd05109 143 KSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILH------RRFTHQSDVWSYGVTVWELMTFGAKPYDGIP 216 (279)
T ss_pred cCCCcEEECCCCceeecccccceeecCCCccchhhCCHHHhcc------CCCCchhHHHHHHHHHHHHHcCCCCCCCCCC
Confidence 999999999999998765332211 2234678999999854 346788999999999999987 888875543
Q ss_pred hHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHh
Q psy3880 156 QMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIME 235 (408)
Q Consensus 156 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~ 235 (408)
.......+. .
T Consensus 217 ~~~~~~~~~----------------------------------------------------------------------~ 226 (279)
T cd05109 217 AREIPDLLE----------------------------------------------------------------------K 226 (279)
T ss_pred HHHHHHHHH----------------------------------------------------------------------C
Confidence 322211111 1
Q ss_pred cCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHc
Q psy3880 236 GKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALN 275 (408)
Q Consensus 236 ~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~ 275 (408)
+. .. +.....+.++.++|.+||..||++|||+.+++.
T Consensus 227 ~~-~~--~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~ 263 (279)
T cd05109 227 GE-RL--PQPPICTIDVYMIMVKCWMIDSECRPRFRELVD 263 (279)
T ss_pred CC-cC--CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 10 01 112346788999999999999999999999985
No 287
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=99.96 E-value=9.4e-29 Score=234.54 Aligned_cols=189 Identities=21% Similarity=0.334 Sum_probs=141.6
Q ss_pred ccccCCcEEEEec---cCC-----cHHHHHHHHHhhchhhHHhhh-----------CCHHHHHHHHHHHHHHHHHHHHCC
Q psy3880 6 MVAHSRVVVRVKE---EGD-----DLKHLAAQVVDKGEAAVQDII-----------NSNPALRYIMRQLFEALEHVHNHS 66 (408)
Q Consensus 6 ~~~~~~~i~~~~~---~~~-----~~~~lv~e~~~~g~~~l~~~~-----------~~~~~~r~i~~qil~aL~~LH~~~ 66 (408)
.+.|++++ .+.. +.+ ...++++||+.+|+ |.+.+ .+...+..++.|++.||.|||+++
T Consensus 57 ~l~h~~iv-~~~~~~~~~~~~~~~~~~~~v~e~~~~~~--l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~ 133 (273)
T cd05035 57 DFDHPNVM-KLIGVCFEASSLQKIPKPMVILPFMKHGD--LHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRN 133 (273)
T ss_pred hCCCCCee-eEEeeeccCCccccCcccEEEEeccCCCC--HHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 36798855 4443 111 23589999999998 65554 234678889999999999999999
Q ss_pred CeeccCCCCcEEEecCCCEEEeccccchhcccCccc---ccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHH
Q psy3880 67 VVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKL---MDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYT 143 (408)
Q Consensus 67 IvHRDLKp~NILl~~~~~iKl~DFGla~~~~~~~~~---~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ 143 (408)
|+||||||+||++++++.+||+|||+++.+...... ....++..|+|||.+.. ..++.++|+||+||++|+
T Consensus 134 i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~------~~~~~~~Dv~SlG~il~e 207 (273)
T cd05035 134 FIHRDLAARNCMLREDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLAD------RVYTSKSDVWAFGVTMWE 207 (273)
T ss_pred eeccccchheEEECCCCeEEECCccceeeccccccccccccccCCccccCHhhccc------CCCCcccchHHHHHHHHH
Confidence 999999999999999999999999999866433211 11335678999998853 346789999999999999
Q ss_pred HHh-CCCCCCCchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCC
Q psy3880 144 LLV-GCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFW 222 (408)
Q Consensus 144 ll~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~ 222 (408)
|++ |.+||.+.+..+.+..+..+.
T Consensus 208 l~~~g~~p~~~~~~~~~~~~~~~~~------------------------------------------------------- 232 (273)
T cd05035 208 IATRGQTPYPGVENHEIYDYLRHGN------------------------------------------------------- 232 (273)
T ss_pred HHhCCCCCCCCCCHHHHHHHHHcCC-------------------------------------------------------
Confidence 998 888886655443333322110
Q ss_pred CchhHHHHHHHHhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcC
Q psy3880 223 HRKQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNH 276 (408)
Q Consensus 223 ~~~~~~~~~~i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~H 276 (408)
. .. .....++++.++|.+||+.||++|||+.|++++
T Consensus 233 ---------------~-~~--~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~ 268 (273)
T cd05035 233 ---------------R-LK--QPEDCLDELYDLMYSCWRADPKDRPTFTKLREV 268 (273)
T ss_pred ---------------C-CC--CCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 0 00 012457889999999999999999999999864
No 288
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=99.96 E-value=5.9e-29 Score=245.53 Aligned_cols=153 Identities=25% Similarity=0.386 Sum_probs=117.3
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEecCCCEEEeccccchhcccCcc---cccCCCCCcccChhhhhhccc
Q psy3880 46 PALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEK---LMDLCGTPGYLAPEVLRANMF 122 (408)
Q Consensus 46 ~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl~~~~~iKl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~l~~~~~ 122 (408)
+.+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++..+..... .....++..|+|||++..
T Consensus 173 ~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--- 249 (337)
T cd05054 173 EDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPESIFD--- 249 (337)
T ss_pred HHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccCcHHhcC---
Confidence 56788999999999999999999999999999999999999999999987643221 112345678999999864
Q ss_pred cCcCCCCcchhhhhhhHHHHHHHh-CCCCCCCchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCc
Q psy3880 123 EDATGYGQAVDVWACGVIMYTLLV-GCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQA 201 (408)
Q Consensus 123 ~~~~~~~~~~DiwSlGvil~~ll~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~ 201 (408)
..++.++|+||+||++|+|++ |..||.+....+.+....
T Consensus 250 ---~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~------------------------------------- 289 (337)
T cd05054 250 ---KVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRL------------------------------------- 289 (337)
T ss_pred ---CCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHH-------------------------------------
Confidence 457889999999999999997 999986533211111111
Q ss_pred ccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcC
Q psy3880 202 VDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNH 276 (408)
Q Consensus 202 ~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~H 276 (408)
..+. ....+ ...++++.+++.+||+.+|++|||++|+++|
T Consensus 290 --------------------------------~~~~-~~~~~--~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~ 329 (337)
T cd05054 290 --------------------------------KEGT-RMRAP--EYATPEIYSIMLDCWHNNPEDRPTFSELVEI 329 (337)
T ss_pred --------------------------------hccC-CCCCC--ccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 0000 00001 2357889999999999999999999999875
No 289
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.96 E-value=1.3e-28 Score=242.10 Aligned_cols=224 Identities=24% Similarity=0.462 Sum_probs=153.7
Q ss_pred ccccCCcEEEEecc---CCcHHHHHHHHHhhchhhHHhhhC----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEE
Q psy3880 6 MVAHSRVVVRVKEE---GDDLKHLAAQVVDKGEAAVQDIIN----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENIL 78 (408)
Q Consensus 6 ~~~~~~~i~~~~~~---~~~~~~lv~e~~~~g~~~l~~~~~----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NIL 78 (408)
.+.|+|++ .+.+. .....|+|+||+. +. |.+.+. ....++.++.|+++||+|||++||+||||||.|||
T Consensus 65 ~l~hpniv-~~~~~~~~~~~~~~lv~e~~~-~~--L~~~~~~~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nil 140 (328)
T cd07856 65 HLRHENII-SLSDIFISPLEDIYFVTELLG-TD--LHRLLTSRPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNIL 140 (328)
T ss_pred hcCCCCee-eEeeeEecCCCcEEEEeehhc-cC--HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEe
Confidence 46798855 55542 2446789999984 44 655543 34678889999999999999999999999999999
Q ss_pred EecCCCEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHH
Q psy3880 79 LDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMV 158 (408)
Q Consensus 79 l~~~~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~ 158 (408)
++.++.+||+|||++..... ......+++.|+|||.+.. ...++.++|+||+||++|+|++|..||.+.....
T Consensus 141 i~~~~~~~l~dfg~~~~~~~--~~~~~~~~~~y~aPE~~~~-----~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~ 213 (328)
T cd07856 141 INENCDLKICDFGLARIQDP--QMTGYVSTRYYRAPEIMLT-----WQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVN 213 (328)
T ss_pred ECCCCCEEeCccccccccCC--CcCCCcccccccCceeeec-----cCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 99999999999999875432 2234567889999998753 2357889999999999999999999998776544
Q ss_pred HHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCC
Q psy3880 159 MLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKY 238 (408)
Q Consensus 159 ~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~ 238 (408)
....+...... .|+.+..... ..+.............
T Consensus 214 ~~~~~~~~~~~-------------~~~~~~~~~~------------------------------~~~~~~~~~~~~~~~~ 250 (328)
T cd07856 214 QFSIITDLLGT-------------PPDDVINTIC------------------------------SENTLRFVQSLPKREP 250 (328)
T ss_pred HHHHHHHHhCC-------------CCHHHHHhcc------------------------------chhhHHHHhhccccCC
Confidence 33333221000 0111110000 0000000101000000
Q ss_pred CCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCCC
Q psy3880 239 SFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKL 283 (408)
Q Consensus 239 ~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~~ 283 (408)
.........++++++++|++||+.||++|||+++++.||||....
T Consensus 251 ~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~~~~~~~ 295 (328)
T cd07856 251 VPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPYLAPYH 295 (328)
T ss_pred CcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCCcccccc
Confidence 000011235788999999999999999999999999999997653
No 290
>KOG1989|consensus
Probab=99.96 E-value=2.5e-29 Score=262.15 Aligned_cols=189 Identities=30% Similarity=0.504 Sum_probs=139.9
Q ss_pred ccCCcEEEEec------cCCc--H-HHHHHHHHhhchhhHHhhhC-------CHHHHHHHHHHHHHHHHHHHHCC--Cee
Q psy3880 8 AHSRVVVRVKE------EGDD--L-KHLAAQVVDKGEAAVQDIIN-------SNPALRYIMRQLFEALEHVHNHS--VVH 69 (408)
Q Consensus 8 ~~~~~i~~~~~------~~~~--~-~~lv~e~~~~g~~~l~~~~~-------~~~~~r~i~~qil~aL~~LH~~~--IvH 69 (408)
.|+|+| .+.+ .++. + ..|.||||.||. |.|.++ ++.++..||.|+++||.+||... |||
T Consensus 93 gh~nIV-~yidss~~~~~~~~~~~EvllLmEyC~gg~--Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIH 169 (738)
T KOG1989|consen 93 GHKNIV-SYIDSSAINRSSNNGVWEVLLLMEYCKGGS--LVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIH 169 (738)
T ss_pred CCCcee-eEeccccccccCCCceeEEEeehhhccCCc--HHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccch
Confidence 488855 5554 1222 2 368999999877 777765 35899999999999999999998 999
Q ss_pred ccCCCCcEEEecCCCEEEeccccchhcccCc-c---------cccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhH
Q psy3880 70 RDLKPENILLDDQMNVKLTDFGFARVLKKGE-K---------LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGV 139 (408)
Q Consensus 70 RDLKp~NILl~~~~~iKl~DFGla~~~~~~~-~---------~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGv 139 (408)
||||-||+||+.++..||||||.|..-...- . .....-|+.|+|||++.-- ...+.+.|+|||||||
T Consensus 170 RDLKiENvLls~~g~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDly---sg~pI~eKsDIWALGc 246 (738)
T KOG1989|consen 170 RDLKIENVLLSADGNYKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLY---SGLPIGEKSDIWALGC 246 (738)
T ss_pred hhhhhhheEEcCCCCEEeCcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhh---cCCCCcchhHHHHHHH
Confidence 9999999999999999999999886422111 0 0123568999999998531 1234456666666666
Q ss_pred HHHHHHhCCCCCCCchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCC
Q psy3880 140 IMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCP 219 (408)
Q Consensus 140 il~~ll~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~ 219 (408)
+||-|+..+.||.+
T Consensus 247 lLYkLCy~t~PFe~------------------------------------------------------------------ 260 (738)
T KOG1989|consen 247 LLYKLCYFTTPFEE------------------------------------------------------------------ 260 (738)
T ss_pred HHHHHHHhCCCcCc------------------------------------------------------------------
Confidence 66666666666633
Q ss_pred CCCCchhHHHHHHHHhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCC
Q psy3880 220 PFWHRKQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSF 278 (408)
Q Consensus 220 Pf~~~~~~~~~~~i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpw 278 (408)
..+ ..|++++|.|+. ++..|..+++||+.||+.||.+||++-|++.+-+
T Consensus 261 ----sg~----laIlng~Y~~P~--~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~ 309 (738)
T KOG1989|consen 261 ----SGK----LAILNGNYSFPP--FPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIF 309 (738)
T ss_pred ----Ccc----eeEEeccccCCC--CccHHHHHHHHHHHHhccCcccCCCHHHHHHHHH
Confidence 211 146778888754 4678999999999999999999999998876543
No 291
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=99.96 E-value=8.1e-29 Score=235.52 Aligned_cols=188 Identities=16% Similarity=0.316 Sum_probs=142.6
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC------CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcE
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN------SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENI 77 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~------~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NI 77 (408)
.+.|+|++ ++.. ..++..++||||+.+|. |.+.+. +..++..++.||+.||+|||++|++||||||+||
T Consensus 62 ~l~h~~iv-~~~~~~~~~~~~~lv~e~~~~~~--L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~ni 138 (266)
T cd05064 62 QFDHSNIV-RLEGVITRGNTMMIVTEYMSNGA--LDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKV 138 (266)
T ss_pred cCCCCCcC-eEEEEEecCCCcEEEEEeCCCCc--HHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhE
Confidence 36799855 5554 45567899999999998 766553 3478899999999999999999999999999999
Q ss_pred EEecCCCEEEeccccchhcccCcccc--cCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHh-CCCCCCCc
Q psy3880 78 LLDDQMNVKLTDFGFARVLKKGEKLM--DLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPFWHR 154 (408)
Q Consensus 78 Ll~~~~~iKl~DFGla~~~~~~~~~~--~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~-G~~pf~~~ 154 (408)
|++.++.+|++|||.+.......... ...++..|+|||++.. ..++.++|+||+||++|++++ |..||.+.
T Consensus 139 li~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~~l~ell~~g~~p~~~~ 212 (266)
T cd05064 139 LVNSDLVCKISGFRRLQEDKSEAIYTTMSGKSPVLWAAPEAIQY------HHFSSASDVWSFGIVMWEVMSYGERPYWDM 212 (266)
T ss_pred EEcCCCcEEECCCcccccccccchhcccCCCCceeecCHHHHhh------CCccchhHHHHHHHHHHHHhcCCCCCcCcC
Confidence 99999999999999876543222111 2335678999999864 356788999999999999764 88888766
Q ss_pred hhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHH
Q psy3880 155 KQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIM 234 (408)
Q Consensus 155 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~ 234 (408)
+....+..+..+.
T Consensus 213 ~~~~~~~~~~~~~------------------------------------------------------------------- 225 (266)
T cd05064 213 SGQDVIKAVEDGF------------------------------------------------------------------- 225 (266)
T ss_pred CHHHHHHHHHCCC-------------------------------------------------------------------
Confidence 5544443332211
Q ss_pred hcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHc
Q psy3880 235 EGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALN 275 (408)
Q Consensus 235 ~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~ 275 (408)
.. +.....+..+.+++.+|+..||.+|||++|+++
T Consensus 226 ----~~--~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~ 260 (266)
T cd05064 226 ----RL--PAPRNCPNLLHQLMLDCWQKERGERPRFSQIHS 260 (266)
T ss_pred ----CC--CCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHH
Confidence 01 112346778999999999999999999999865
No 292
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=99.96 E-value=1.1e-28 Score=234.52 Aligned_cols=152 Identities=19% Similarity=0.282 Sum_probs=113.3
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhCC----------HHHHHHHHHHHHHHHHHHHHCCCeeccCC
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIINS----------NPALRYIMRQLFEALEHVHNHSVVHRDLK 73 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~~----------~~~~r~i~~qil~aL~~LH~~~IvHRDLK 73 (408)
.+.|+|++ .+.. ...+..|+||||+.+|. |.+++.+ ...+..++.||+.||+|||++||+|||||
T Consensus 51 ~l~h~nii-~~~~~~~~~~~~~lv~e~~~~g~--L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlk 127 (269)
T cd05042 51 ELNHPNVL-QCLGQCIESIPYLLVLEFCPLGD--LKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLA 127 (269)
T ss_pred hCCCCCcc-eEEEEECCCCceEEEEEeCCCCc--HHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEeccccc
Confidence 36799866 4443 44567899999999998 8777632 35678899999999999999999999999
Q ss_pred CCcEEEecCCCEEEeccccchhcccCccc---ccCCCCCcccChhhhhhcccc-CcCCCCcchhhhhhhHHHHHHHh-CC
Q psy3880 74 PENILLDDQMNVKLTDFGFARVLKKGEKL---MDLCGTPGYLAPEVLRANMFE-DATGYGQAVDVWACGVIMYTLLV-GC 148 (408)
Q Consensus 74 p~NILl~~~~~iKl~DFGla~~~~~~~~~---~~~~gt~~y~aPE~l~~~~~~-~~~~~~~~~DiwSlGvil~~ll~-G~ 148 (408)
|+|||++.++.+||+|||++......... ....+++.|+|||++...... ....++.++|+||+||++|+|++ |.
T Consensus 128 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~ 207 (269)
T cd05042 128 LRNCQLTADLSVKIGDYGLALEQYPEDYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAAD 207 (269)
T ss_pred HhheEecCCCcEEEeccccccccccchheeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCC
Confidence 99999999999999999998654332211 223456789999998642110 12345778889998888888888 67
Q ss_pred CCCCCchhHHHH
Q psy3880 149 PPFWHRKQMVML 160 (408)
Q Consensus 149 ~pf~~~~~~~~~ 160 (408)
.||......+.+
T Consensus 208 ~p~~~~~~~~~~ 219 (269)
T cd05042 208 QPYPDLSDEQVL 219 (269)
T ss_pred CCCCcCCHHHHH
Confidence 777655444333
No 293
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=99.96 E-value=1.3e-28 Score=235.44 Aligned_cols=190 Identities=18% Similarity=0.309 Sum_probs=142.9
Q ss_pred ccccCCcEEEEe-ccCCcHHHHHHHHHhhchhhHHhhhC------------CHHHHHHHHHHHHHHHHHHHHCCCeeccC
Q psy3880 6 MVAHSRVVVRVK-EEGDDLKHLAAQVVDKGEAAVQDIIN------------SNPALRYIMRQLFEALEHVHNHSVVHRDL 72 (408)
Q Consensus 6 ~~~~~~~i~~~~-~~~~~~~~lv~e~~~~g~~~l~~~~~------------~~~~~r~i~~qil~aL~~LH~~~IvHRDL 72 (408)
.+.|++++..+. ....+..++||||+.||. |.+.+. +...+..++.||+.||+|||+++++||||
T Consensus 65 ~l~~~~i~~~~~~~~~~~~~~lv~e~~~g~~--L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dl 142 (277)
T cd05036 65 KFNHQNIVRLIGVSFERLPRFILLELMAGGD--LKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDI 142 (277)
T ss_pred hCCCCCEeeEEEEEccCCCcEEEEecCCCCC--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccc
Confidence 467887653333 245566789999999998 777652 33677889999999999999999999999
Q ss_pred CCCcEEEecCC---CEEEeccccchhcccCccc---ccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHh
Q psy3880 73 KPENILLDDQM---NVKLTDFGFARVLKKGEKL---MDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV 146 (408)
Q Consensus 73 Kp~NILl~~~~---~iKl~DFGla~~~~~~~~~---~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~ 146 (408)
||+|||++.++ .+||+|||+++.+...... .....++.|+|||++.. ..++.++|+||+||++|+|++
T Consensus 143 kp~nil~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~------~~~~~~~DiwslG~il~el~~ 216 (277)
T cd05036 143 AARNCLLTCKGPGRVAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLD------GIFTSKTDVWSFGVLLWEIFS 216 (277)
T ss_pred chheEEEeccCCCcceEeccCccccccCCccceecCCCCCccHhhCCHHHHhc------CCcCchhHHHHHHHHHHHHHc
Confidence 99999998654 5899999999876332211 12233467999999864 347889999999999999996
Q ss_pred -CCCCCCCchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCch
Q psy3880 147 -GCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRK 225 (408)
Q Consensus 147 -G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~ 225 (408)
|..||.+.+.......+..+.
T Consensus 217 ~g~~pf~~~~~~~~~~~~~~~~---------------------------------------------------------- 238 (277)
T cd05036 217 LGYMPYPGRTNQEVMEFVTGGG---------------------------------------------------------- 238 (277)
T ss_pred CCCCCCCCCCHHHHHHHHHcCC----------------------------------------------------------
Confidence 999997655443333222110
Q ss_pred hHHHHHHHHhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcC
Q psy3880 226 QMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNH 276 (408)
Q Consensus 226 ~~~~~~~i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~H 276 (408)
...+ -..++.++.++|.+||+.||++|||+.++|+|
T Consensus 239 -----------~~~~----~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~ 274 (277)
T cd05036 239 -----------RLDP----PKGCPGPVYRIMTDCWQHTPEDRPNFATILER 274 (277)
T ss_pred -----------cCCC----CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 0001 02457789999999999999999999999986
No 294
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=99.96 E-value=1.5e-28 Score=232.46 Aligned_cols=189 Identities=21% Similarity=0.343 Sum_probs=145.3
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC------CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcE
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN------SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENI 77 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~------~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NI 77 (408)
++.|++++ .+.+ ...+..++||||+.+|. |.+.+. +...+..++.||+.||+|||++|++|+||||+||
T Consensus 55 ~l~h~~i~-~~~~~~~~~~~~~lv~e~~~~~~--l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni 131 (256)
T cd05113 55 KLSHEKLV-QLYGVCTKQRPIYIVTEYMSNGC--LLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNC 131 (256)
T ss_pred cCCCCCee-eEEEEEccCCCcEEEEEcCCCCc--HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceE
Confidence 57898755 5553 45566799999999997 776653 3478899999999999999999999999999999
Q ss_pred EEecCCCEEEeccccchhcccCcccc--cCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHh-CCCCCCCc
Q psy3880 78 LLDDQMNVKLTDFGFARVLKKGEKLM--DLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPFWHR 154 (408)
Q Consensus 78 Ll~~~~~iKl~DFGla~~~~~~~~~~--~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~-G~~pf~~~ 154 (408)
+++.++.+||+|||+++......... ...++..|+|||.+.. ..++.++|+|||||++|+|++ |..||...
T Consensus 132 li~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~------~~~~~~~Di~slG~~l~~l~~~g~~p~~~~ 205 (256)
T cd05113 132 LVDDQGCVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLLY------SKFSSKSDVWAFGVLMWEVYSLGKMPYERF 205 (256)
T ss_pred EEcCCCCEEECCCccceecCCCceeecCCCccChhhCCHHHHhc------CcccchhHHHHHHHHHHHHhcCCCCCcCcC
Confidence 99999999999999987654432211 2234567999999864 347789999999999999998 98898655
Q ss_pred hhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHH
Q psy3880 155 KQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIM 234 (408)
Q Consensus 155 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~ 234 (408)
+.......+..+.
T Consensus 206 ~~~~~~~~~~~~~------------------------------------------------------------------- 218 (256)
T cd05113 206 NNSETVEKVSQGL------------------------------------------------------------------- 218 (256)
T ss_pred CHHHHHHHHhcCC-------------------------------------------------------------------
Confidence 5444333332211
Q ss_pred hcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcC
Q psy3880 235 EGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNH 276 (408)
Q Consensus 235 ~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~H 276 (408)
..+.. ...+..+++++.+||..||.+|||+.+++.+
T Consensus 219 ---~~~~~---~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~ 254 (256)
T cd05113 219 ---RLYRP---HLASEKVYAIMYSCWHEKAEERPTFQQLLSS 254 (256)
T ss_pred ---CCCCC---CCCCHHHHHHHHHHcCCCcccCCCHHHHHHh
Confidence 11100 1247789999999999999999999999864
No 295
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=99.96 E-value=1.5e-28 Score=232.07 Aligned_cols=189 Identities=21% Similarity=0.343 Sum_probs=143.0
Q ss_pred ccccCCcEEEEeccCCcHHHHHHHHHhhchhhHHhhhC-----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEe
Q psy3880 6 MVAHSRVVVRVKEEGDDLKHLAAQVVDKGEAAVQDIIN-----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLD 80 (408)
Q Consensus 6 ~~~~~~~i~~~~~~~~~~~~lv~e~~~~g~~~l~~~~~-----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl~ 80 (408)
.+.|+++|--+.....+..++||||+.+|. |.+.+. ++..+..++.|++.||+|||+++++||||||+|||++
T Consensus 52 ~l~h~~iv~~~~~~~~~~~~~v~e~~~~~~--L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~ 129 (257)
T cd05060 52 QLDHPCIVRLIGVCKGEPLMLVMELAPLGP--LLKYLKKRREIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLV 129 (257)
T ss_pred hcCCCCeeeEEEEEcCCceEEEEEeCCCCc--HHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEc
Confidence 467988654333344456789999999998 887773 4578899999999999999999999999999999999
Q ss_pred cCCCEEEeccccchhcccCcccc-c---CCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHh-CCCCCCCch
Q psy3880 81 DQMNVKLTDFGFARVLKKGEKLM-D---LCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPFWHRK 155 (408)
Q Consensus 81 ~~~~iKl~DFGla~~~~~~~~~~-~---~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~-G~~pf~~~~ 155 (408)
.++.+||+|||+++.+....... . ..++..|+|||.+.. ..++.++|+|||||++|++++ |..||...+
T Consensus 130 ~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~ 203 (257)
T cd05060 130 NRHQAKISDFGMSRALGAGSDYYRATTAGRWPLKWYAPECINY------GKFSSKSDVWSYGVTLWEAFSYGAKPYGEMK 203 (257)
T ss_pred CCCcEEeccccccceeecCCcccccccCccccccccCHHHhcC------CCCCccchHHHHHHHHHHHHcCCCCCcccCC
Confidence 99999999999998765433221 1 123457999998854 346788999999999999997 888886554
Q ss_pred hHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHh
Q psy3880 156 QMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIME 235 (408)
Q Consensus 156 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~ 235 (408)
..+....+.++
T Consensus 204 ~~~~~~~~~~~--------------------------------------------------------------------- 214 (257)
T cd05060 204 GAEVIAMLESG--------------------------------------------------------------------- 214 (257)
T ss_pred HHHHHHHHHcC---------------------------------------------------------------------
Confidence 43333332211
Q ss_pred cCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHc
Q psy3880 236 GKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALN 275 (408)
Q Consensus 236 ~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~ 275 (408)
.. .+....++..++++|.+||..||++|||+.++++
T Consensus 215 -~~---~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~ 250 (257)
T cd05060 215 -ER---LPRPEECPQEIYSIMLSCWKYRPEDRPTFSELES 250 (257)
T ss_pred -Cc---CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 00 0111346788999999999999999999999875
No 296
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.96 E-value=4.2e-29 Score=233.88 Aligned_cols=191 Identities=37% Similarity=0.663 Sum_probs=145.5
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC-----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEE
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN-----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENIL 78 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~-----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NIL 78 (408)
.+.|++++ .+.. +.++..++|||++.++. |.+.+. ++..+..++.|++.||.|||+.+++|+||+|+||+
T Consensus 49 ~l~h~~i~-~~~~~~~~~~~~~~v~e~~~~~~--L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~ 125 (250)
T cd05123 49 RINHPFIV-KLHYAFQTEEKLYLVLEYAPGGE--LFSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENIL 125 (250)
T ss_pred HcCCCcHH-HHHHHeecCCeeEEEEecCCCCc--HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEE
Confidence 35688755 4433 45667899999999888 777663 45788999999999999999999999999999999
Q ss_pred EecCCCEEEeccccchhcccC-cccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhH
Q psy3880 79 LDDQMNVKLTDFGFARVLKKG-EKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 157 (408)
Q Consensus 79 l~~~~~iKl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~ 157 (408)
++.++.++|+|||++...... .......++..|+|||.+... .++.++|+||+|+++|++++|..||...+.
T Consensus 126 ~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~------~~~~~~D~~slG~~~~~l~~g~~p~~~~~~- 198 (250)
T cd05123 126 LDADGHIKLTDFGLAKELSSEGSRTNTFCGTPEYLAPEVLLGK------GYGKAVDWWSLGVLLYEMLTGKPPFYAEDR- 198 (250)
T ss_pred EcCCCcEEEeecCcceecccCCCcccCCcCCccccChHHhCCC------CCCchhhHHHHHHHHHHHHHCCCCCCCCCH-
Confidence 999999999999998765443 223346788899999987542 245667777777777777777777644322
Q ss_pred HHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcC
Q psy3880 158 VMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 237 (408)
Q Consensus 158 ~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~ 237 (408)
..+...+....
T Consensus 199 ---------------------------------------------------------------------~~~~~~~~~~~ 209 (250)
T cd05123 199 ---------------------------------------------------------------------KEIYEKILKDP 209 (250)
T ss_pred ---------------------------------------------------------------------HHHHHHHhcCC
Confidence 22233333332
Q ss_pred CCCCCCcCCCCCccHHHHHHHhcccCCCCCCCH---HHHHcCCCC
Q psy3880 238 YSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSV---KEALNHSFF 279 (408)
Q Consensus 238 ~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta---~e~L~Hpwf 279 (408)
..++ ..++.+++++|++||..||++|||+ +++++||||
T Consensus 210 ~~~~----~~~~~~l~~~i~~~l~~~p~~R~~~~~~~~l~~~~~f 250 (250)
T cd05123 210 LRFP----EFLSPEARDLISGLLQKDPTKRLGSGGAEEIKAHPFF 250 (250)
T ss_pred CCCC----CCCCHHHHHHHHHHhcCCHhhCCCcccHHHHHhCCCC
Confidence 2222 2458899999999999999999999 999999998
No 297
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=99.96 E-value=1.5e-28 Score=234.06 Aligned_cols=187 Identities=19% Similarity=0.356 Sum_probs=137.1
Q ss_pred cccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhCC---------------HHHHHHHHHHHHHHHHHHHHCCCee
Q psy3880 7 VAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIINS---------------NPALRYIMRQLFEALEHVHNHSVVH 69 (408)
Q Consensus 7 ~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~~---------------~~~~r~i~~qil~aL~~LH~~~IvH 69 (408)
+.|++++ .+.. +..+..++||||+.+|. |.+++.+ ...+..++.|++.||.|||+++|+|
T Consensus 66 ~~~~~i~-~~~~~~~~~~~~~~v~e~~~~~~--L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H 142 (277)
T cd05032 66 FNCHHVV-RLLGVVSTGQPTLVVMELMAKGD--LKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVH 142 (277)
T ss_pred CCCCcee-EEEEEEcCCCCcEEEEecCCCCC--HHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 5788755 5554 55577899999999998 8777632 3467889999999999999999999
Q ss_pred ccCCCCcEEEecCCCEEEeccccchhcccCcc---cccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHh
Q psy3880 70 RDLKPENILLDDQMNVKLTDFGFARVLKKGEK---LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV 146 (408)
Q Consensus 70 RDLKp~NILl~~~~~iKl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~ 146 (408)
|||||+|||++.++.+||+|||+++.+..... .....++..|+|||.+.. ..++.++|+|||||++|++++
T Consensus 143 ~di~p~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~el~t 216 (277)
T cd05032 143 RDLAARNCMVAEDLTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKD------GVFTTKSDVWSFGVVLWEMAT 216 (277)
T ss_pred cccChheEEEcCCCCEEECCcccchhhccCcccccCCCCCccccccCHHHHhc------CCCCcccchHHHHHHHHHhhc
Confidence 99999999999999999999999876544321 123456778999998753 235566777777777777665
Q ss_pred -CCCCCCCchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCch
Q psy3880 147 -GCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRK 225 (408)
Q Consensus 147 -G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~ 225 (408)
|..||.+. +
T Consensus 217 ~g~~p~~~~----------------------------------------------------------------------~ 226 (277)
T cd05032 217 LAEQPYQGL----------------------------------------------------------------------S 226 (277)
T ss_pred cCCCCCccC----------------------------------------------------------------------C
Confidence 66665432 2
Q ss_pred hHHHHHHHHhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHc
Q psy3880 226 QMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALN 275 (408)
Q Consensus 226 ~~~~~~~i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~ 275 (408)
.......+..+.. ...+ ...+.++++||.+||+.||++|||+.++++
T Consensus 227 ~~~~~~~~~~~~~-~~~~--~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 273 (277)
T cd05032 227 NEEVLKFVIDGGH-LDLP--ENCPDKLLELMRMCWQYNPKMRPTFLEIVS 273 (277)
T ss_pred HHHHHHHHhcCCC-CCCC--CCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 2223333332221 1111 235889999999999999999999999986
No 298
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.96 E-value=6.2e-29 Score=234.81 Aligned_cols=191 Identities=26% Similarity=0.445 Sum_probs=146.7
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhh---------CCHHHHHHHHHHHHHHHHHHHHCCCeeccCCC
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDII---------NSNPALRYIMRQLFEALEHVHNHSVVHRDLKP 74 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~---------~~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp 74 (408)
.+.|+|++ ++.+ ...+..++|+||+.++. |.+.+ .++.++..++.|++.||.|||++|++|+||||
T Consensus 58 ~l~h~~i~-~~~~~~~~~~~~~lv~e~~~~~~--l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~ 134 (260)
T cd08222 58 KLDHPAIV-KFHASFLERDAFCIITEYCEGRD--LDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKA 134 (260)
T ss_pred hCCCCcHH-HHHHHHhcCCceEEEEEeCCCCC--HHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCCh
Confidence 35688755 5544 34456789999999987 66544 24578899999999999999999999999999
Q ss_pred CcEEEecCCCEEEeccccchhcccCcc-cccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCC
Q psy3880 75 ENILLDDQMNVKLTDFGFARVLKKGEK-LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH 153 (408)
Q Consensus 75 ~NILl~~~~~iKl~DFGla~~~~~~~~-~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~ 153 (408)
+||++++ +.+||+|||++........ .....|++.|+|||.+.. ..++.++|+||+|+++|+|++|..||..
T Consensus 135 ~nili~~-~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~pe~~~~------~~~~~~~Dv~slG~~~~~l~~~~~~~~~ 207 (260)
T cd08222 135 KNIFLKN-NLLKIGDFGVSRLLMGSCDLATTFTGTPYYMSPEALKH------QGYDSKSDIWSLGCILYEMCCLAHAFEG 207 (260)
T ss_pred hheEeec-CCEeecccCceeecCCCcccccCCCCCcCccCHHHHcc------CCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 9999975 5699999999876644322 234668899999998753 3467789999999999999999999865
Q ss_pred chhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHH
Q psy3880 154 RKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI 233 (408)
Q Consensus 154 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i 233 (408)
.........+..+. .|
T Consensus 208 ~~~~~~~~~~~~~~---------------------------------------------------~~------------- 223 (260)
T cd08222 208 QNFLSVVLRIVEGP---------------------------------------------------TP------------- 223 (260)
T ss_pred ccHHHHHHHHHcCC---------------------------------------------------CC-------------
Confidence 54333322222110 00
Q ss_pred HhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q psy3880 234 MEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFF 279 (408)
Q Consensus 234 ~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf 279 (408)
.+ -...+.++.+||.+||..||++|||+.|+++||||
T Consensus 224 -----~~----~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 260 (260)
T cd08222 224 -----SL----PETYSRQLNSIMQSMLNKDPSLRPSAAEILRNPFI 260 (260)
T ss_pred -----CC----cchhcHHHHHHHHHHhcCChhhCcCHHHHhhCCCC
Confidence 00 12457789999999999999999999999999997
No 299
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=99.96 E-value=8.7e-29 Score=233.44 Aligned_cols=187 Identities=20% Similarity=0.321 Sum_probs=141.5
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC-------CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCc
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN-------SNPALRYIMRQLFEALEHVHNHSVVHRDLKPEN 76 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~-------~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~N 76 (408)
.+.|++++..+.. ..++..|+|+||+.+|. |.+.+. +.+.+..++.|++.||+|||++||+||||||+|
T Consensus 55 ~l~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~--L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~n 132 (256)
T cd05082 55 QLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGS--LVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARN 132 (256)
T ss_pred hCCCCCeeeEEEEEEcCCCceEEEEECCCCCc--HHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchhe
Confidence 4679886644432 34456799999999998 777653 236788999999999999999999999999999
Q ss_pred EEEecCCCEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHh-CCCCCCCch
Q psy3880 77 ILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPFWHRK 155 (408)
Q Consensus 77 ILl~~~~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~-G~~pf~~~~ 155 (408)
|++++++.+||+|||++....... ....++..|+|||++.. ..++.++|+||+||++|+|++ |..||...+
T Consensus 133 il~~~~~~~kl~dfg~~~~~~~~~--~~~~~~~~y~aPE~~~~------~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~ 204 (256)
T cd05082 133 VLVSEDNVAKVSDFGLTKEASSTQ--DTGKLPVKWTAPEALRE------KKFSTKSDVWSFGILLWEIYSFGRVPYPRIP 204 (256)
T ss_pred EEEcCCCcEEecCCccceeccccC--CCCccceeecCHHHHcc------CCCCchhhhHHHHHHHHHHHhCCCCCCCCCC
Confidence 999999999999999987544322 23445678999998854 346778999999999999987 888886544
Q ss_pred hHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHh
Q psy3880 156 QMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIME 235 (408)
Q Consensus 156 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~ 235 (408)
..+....+..
T Consensus 205 ~~~~~~~~~~---------------------------------------------------------------------- 214 (256)
T cd05082 205 LKDVVPRVEK---------------------------------------------------------------------- 214 (256)
T ss_pred HHHHHHHHhc----------------------------------------------------------------------
Confidence 3332222211
Q ss_pred cCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHc
Q psy3880 236 GKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALN 275 (408)
Q Consensus 236 ~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~ 275 (408)
+ +. ....+.+++.++++|.+||..||++|||+.++++
T Consensus 215 ~-~~--~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 251 (256)
T cd05082 215 G-YK--MDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLRE 251 (256)
T ss_pred C-CC--CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 1 00 0111346788999999999999999999999875
No 300
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.96 E-value=1.4e-28 Score=231.01 Aligned_cols=191 Identities=30% Similarity=0.481 Sum_probs=144.3
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhh---------CCHHHHHHHHHHHHHHHHHHHHCCCeeccCCC
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDII---------NSNPALRYIMRQLFEALEHVHNHSVVHRDLKP 74 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~---------~~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp 74 (408)
++.|++++ .+.+ ..++..|+|+||+.++. |.+.+ .+++.+..++.|++.||+|||++|++|+||+|
T Consensus 55 ~l~~~~i~-~~~~~~~~~~~~~~v~e~~~~~~--L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~ 131 (256)
T cd08530 55 SVNHPNII-SYKEAFLDGNKLCIVMEYAPFGD--LSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKS 131 (256)
T ss_pred hCCCCCch-hhhhhhccCCEEEEEehhcCCCC--HHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCc
Confidence 45688755 5543 34466789999999987 66554 23467889999999999999999999999999
Q ss_pred CcEEEecCCCEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCc
Q psy3880 75 ENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHR 154 (408)
Q Consensus 75 ~NILl~~~~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~ 154 (408)
+||+++.++.+||+|||++...... ......+++.|+|||.+.. ..++.++|+||+|+++++|++|+.||...
T Consensus 132 ~ni~~~~~~~~kl~d~g~~~~~~~~-~~~~~~~~~~~~~Pe~~~~------~~~~~~~D~~slG~~~~~l~~g~~p~~~~ 204 (256)
T cd08530 132 ANILLVANDLVKIGDLGISKVLKKN-MAKTQIGTPHYMAPEVWKG------RPYSYKSDIWSLGCLLYEMATFAPPFEAR 204 (256)
T ss_pred ceEEEecCCcEEEeeccchhhhccC-CcccccCCccccCHHHHCC------CCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 9999999999999999999876554 2334568899999999854 33566778888888888888877777543
Q ss_pred hhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHH
Q psy3880 155 KQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIM 234 (408)
Q Consensus 155 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~ 234 (408)
+.. .....+.
T Consensus 205 ~~~----------------------------------------------------------------------~~~~~~~ 214 (256)
T cd08530 205 SMQ----------------------------------------------------------------------DLRYKVQ 214 (256)
T ss_pred CHH----------------------------------------------------------------------HHHHHHh
Confidence 321 1222222
Q ss_pred hcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q psy3880 235 EGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFF 279 (408)
Q Consensus 235 ~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf 279 (408)
.+.+.-.. ...+.+++++|.+||..||++|||+.|+|+||+.
T Consensus 215 ~~~~~~~~---~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~p~~ 256 (256)
T cd08530 215 RGKYPPIP---PIYSQDLQNFIRSMLQVKPKLRPNCDKILASPAV 256 (256)
T ss_pred cCCCCCCc---hhhCHHHHHHHHHHcCCCcccCCCHHHHhcCCCC
Confidence 22221111 2467889999999999999999999999999974
No 301
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=99.96 E-value=5.7e-29 Score=238.74 Aligned_cols=198 Identities=33% Similarity=0.566 Sum_probs=146.7
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhCC------HHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcE
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIINS------NPALRYIMRQLFEALEHVHNHSVVHRDLKPENI 77 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~~------~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NI 77 (408)
.+.|+|++ .+.+ ...+..|+|+||+.|+. |.+.+.. ..++..++.|++.||.|||++||+|+||+|+||
T Consensus 71 ~l~~~~i~-~~~~~~~~~~~~~lv~e~~~~~~--L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni 147 (286)
T cd06614 71 DCKHPNIV-DYYDSYLVGDELWVVMEYMDGGS--LTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNI 147 (286)
T ss_pred HCCCCCee-EEEEEEEECCEEEEEEeccCCCc--HHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhE
Confidence 45788755 5544 34567899999999987 7777543 367888999999999999999999999999999
Q ss_pred EEecCCCEEEeccccchhcccCc-ccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchh
Q psy3880 78 LLDDQMNVKLTDFGFARVLKKGE-KLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQ 156 (408)
Q Consensus 78 Ll~~~~~iKl~DFGla~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~ 156 (408)
+++.++.++|+|||++....... ......+++.|+|||.+.. ..++.++|+||+||++|+|++|..||...+.
T Consensus 148 ~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~------~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~ 221 (286)
T cd06614 148 LLSKDGSVKLADFGFAAQLTKEKSKRNSVVGTPYWMAPEVIKR------KDYGPKVDIWSLGIMCIEMAEGEPPYLREPP 221 (286)
T ss_pred EEcCCCCEEECccchhhhhccchhhhccccCCcccCCHhHhcC------CCCCCccccHHHHHHHHHHHhCCCCCCCCCH
Confidence 99999999999999987654322 1223457889999998753 2356777888888777777777777644322
Q ss_pred HHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhc
Q psy3880 157 MVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEG 236 (408)
Q Consensus 157 ~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~ 236 (408)
. .....+...
T Consensus 222 ~----------------------------------------------------------------------~~~~~~~~~ 231 (286)
T cd06614 222 L----------------------------------------------------------------------RALFLITTK 231 (286)
T ss_pred H----------------------------------------------------------------------HHHHHHHhc
Confidence 1 111122111
Q ss_pred CCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCCC
Q psy3880 237 KYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKL 283 (408)
Q Consensus 237 ~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~~ 283 (408)
... .......++.++++||++||..||.+|||+.++|+||||....
T Consensus 232 ~~~-~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~ 277 (286)
T cd06614 232 GIP-PLKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQHPFLKKAC 277 (286)
T ss_pred CCC-CCcchhhCCHHHHHHHHHHhccChhhCcCHHHHhhChHhhccC
Confidence 111 1112234678999999999999999999999999999998744
No 302
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=99.95 E-value=1.3e-28 Score=231.09 Aligned_cols=189 Identities=23% Similarity=0.392 Sum_probs=147.5
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC--------------CHHHHHHHHHHHHHHHHHHHHCCCee
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN--------------SNPALRYIMRQLFEALEHVHNHSVVH 69 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~--------------~~~~~r~i~~qil~aL~~LH~~~IvH 69 (408)
.+.|++++ .+.+ ..++..++||||+.+|. |.+.+. ++.++..++.|++.||+|||++||+|
T Consensus 52 ~~~~~~i~-~~~~~~~~~~~~~lv~e~~~~~~--L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H 128 (262)
T cd00192 52 KLGHPNVV-RLLGVCTEEEPLYLVLEYMEGGD--LLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVH 128 (262)
T ss_pred hcCCCChh-eeeeeecCCCceEEEEEeccCCc--HHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCccc
Confidence 35688755 4443 34567899999999998 777664 34788999999999999999999999
Q ss_pred ccCCCCcEEEecCCCEEEeccccchhcccCc---ccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHh
Q psy3880 70 RDLKPENILLDDQMNVKLTDFGFARVLKKGE---KLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV 146 (408)
Q Consensus 70 RDLKp~NILl~~~~~iKl~DFGla~~~~~~~---~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~ 146 (408)
|||||+||+++.++.+||+|||.+....... ......+++.|+|||.+.. ..++.++|+||+||++|+|++
T Consensus 129 ~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~~l~~ 202 (262)
T cd00192 129 RDLAARNCLVGEDLVVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLKD------GIFTSKSDVWSFGVLLWEIFT 202 (262)
T ss_pred CccCcceEEECCCCcEEEcccccccccccccccccccCCCcCccccCHHHhcc------CCcchhhccHHHHHHHHHHHh
Confidence 9999999999999999999999998765432 1233567889999998864 257889999999999999998
Q ss_pred -CCCCCCCchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCch
Q psy3880 147 -GCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRK 225 (408)
Q Consensus 147 -G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~ 225 (408)
|..||.+....+....+..+
T Consensus 203 ~g~~p~~~~~~~~~~~~~~~~----------------------------------------------------------- 223 (262)
T cd00192 203 LGATPYPGLSNEEVLEYLRKG----------------------------------------------------------- 223 (262)
T ss_pred cCCCCCCCCCHHHHHHHHHcC-----------------------------------------------------------
Confidence 68898765444333333221
Q ss_pred hHHHHHHHHhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcC
Q psy3880 226 QMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNH 276 (408)
Q Consensus 226 ~~~~~~~i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~H 276 (408)
. ... .-..+|+++.++|.+||..||++|||++|+++|
T Consensus 224 -----------~-~~~--~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 260 (262)
T cd00192 224 -----------Y-RLP--KPEYCPDELYELMLSCWQLDPEDRPTFSELVER 260 (262)
T ss_pred -----------C-CCC--CCccCChHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 0 000 112458899999999999999999999999875
No 303
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=99.95 E-value=1.5e-28 Score=235.50 Aligned_cols=189 Identities=16% Similarity=0.305 Sum_probs=143.6
Q ss_pred ccccCCcEEEEec-cCCcHHHHHHHHHhhchhhHHhhhC--------------------CHHHHHHHHHHHHHHHHHHHH
Q psy3880 6 MVAHSRVVVRVKE-EGDDLKHLAAQVVDKGEAAVQDIIN--------------------SNPALRYIMRQLFEALEHVHN 64 (408)
Q Consensus 6 ~~~~~~~i~~~~~-~~~~~~~lv~e~~~~g~~~l~~~~~--------------------~~~~~r~i~~qil~aL~~LH~ 64 (408)
.+.|+|++.-+.. ...+..+++|||+.+|. |.+.+. +...+..++.||+.||+|||+
T Consensus 63 ~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~--L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~ 140 (280)
T cd05092 63 VLQHQHIVRFYGVCTEGRPLLMVFEYMRHGD--LNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLAS 140 (280)
T ss_pred cCCCCCCceEEEEEecCCceEEEEecCCCCC--HHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHH
Confidence 4689986533322 44567899999999998 776652 346788999999999999999
Q ss_pred CCCeeccCCCCcEEEecCCCEEEeccccchhcccCcc---cccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHH
Q psy3880 65 HSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEK---LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIM 141 (408)
Q Consensus 65 ~~IvHRDLKp~NILl~~~~~iKl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil 141 (408)
+||+||||||+|||+++++.+||+|||++........ .....+++.|+|||.+.. ..++.++|+|||||++
T Consensus 141 ~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il 214 (280)
T cd05092 141 LHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILY------RKFTTESDIWSFGVVL 214 (280)
T ss_pred CCeecccccHhhEEEcCCCCEEECCCCceeEcCCCceeecCCCccccccccCHHHhcc------CCcCchhhHHHHHHHH
Confidence 9999999999999999999999999999875533221 112335678999998864 3467899999999999
Q ss_pred HHHHh-CCCCCCCchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCC
Q psy3880 142 YTLLV-GCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPP 220 (408)
Q Consensus 142 ~~ll~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~P 220 (408)
|+|++ |.+||........+..+..+.
T Consensus 215 ~el~~~g~~p~~~~~~~~~~~~~~~~~----------------------------------------------------- 241 (280)
T cd05092 215 WEIFTYGKQPWYQLSNTEAIECITQGR----------------------------------------------------- 241 (280)
T ss_pred HHHHcCCCCCCccCCHHHHHHHHHcCc-----------------------------------------------------
Confidence 99998 888886654443333322211
Q ss_pred CCCchhHHHHHHHHhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHc
Q psy3880 221 FWHRKQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALN 275 (408)
Q Consensus 221 f~~~~~~~~~~~i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~ 275 (408)
. . .....+++++.+||.+||+.||++|||++|+++
T Consensus 242 -----------------~-~--~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~ 276 (280)
T cd05092 242 -----------------E-L--ERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHS 276 (280)
T ss_pred -----------------c-C--CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 0 0 011246788999999999999999999999875
No 304
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=99.95 E-value=7.7e-29 Score=232.17 Aligned_cols=193 Identities=28% Similarity=0.480 Sum_probs=143.7
Q ss_pred ccccCCcEEEEec-cCCcHHHHHHHHHhhchhhHHhhhC---------CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCC
Q psy3880 6 MVAHSRVVVRVKE-EGDDLKHLAAQVVDKGEAAVQDIIN---------SNPALRYIMRQLFEALEHVHNHSVVHRDLKPE 75 (408)
Q Consensus 6 ~~~~~~~i~~~~~-~~~~~~~lv~e~~~~g~~~l~~~~~---------~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~ 75 (408)
.+.|++++..+.. ...+..++|+|++.++. |.+.+. +..++..++.|++.||.|||++|++|+||+|+
T Consensus 55 ~l~~~~~~~~~~~~~~~~~~~lv~e~~~~~~--L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~ 132 (258)
T cd08215 55 KLNHPNIIKYYESFEEKGKLCIVMEYADGGD--LSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQ 132 (258)
T ss_pred hcCCCChhheEEEEecCCEEEEEEEecCCCc--HHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChH
Confidence 3568886533322 33467789999999987 766553 34788999999999999999999999999999
Q ss_pred cEEEecCCCEEEeccccchhcccCc-ccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCc
Q psy3880 76 NILLDDQMNVKLTDFGFARVLKKGE-KLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHR 154 (408)
Q Consensus 76 NILl~~~~~iKl~DFGla~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~ 154 (408)
||+++.++.++|+|||++....... ......|++.|+|||.+.. ..++.++|+||+|+++++|++|..||...
T Consensus 133 nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~------~~~~~~~Dv~slG~~~~~l~~g~~p~~~~ 206 (258)
T cd08215 133 NIFLTSNGLVKLGDFGISKVLSSTVDLAKTVVGTPYYLSPELCQN------KPYNYKSDIWSLGCVLYELCTLKHPFEGE 206 (258)
T ss_pred HeEEcCCCcEEECCccceeecccCcceecceeeeecccChhHhcc------CCCCccccHHHHHHHHHHHHcCCCCCCCC
Confidence 9999999999999999987665433 2234578899999998753 23566777777777777777777776443
Q ss_pred hhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHH
Q psy3880 155 KQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIM 234 (408)
Q Consensus 155 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~ 234 (408)
+. ......+.
T Consensus 207 ~~----------------------------------------------------------------------~~~~~~~~ 216 (258)
T cd08215 207 NL----------------------------------------------------------------------LELALKIL 216 (258)
T ss_pred cH----------------------------------------------------------------------HHHHHHHh
Confidence 22 22222222
Q ss_pred hcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q psy3880 235 EGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFF 279 (408)
Q Consensus 235 ~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf 279 (408)
....... -...+.+++++|.+||..||++|||+.|+|+||||
T Consensus 217 ~~~~~~~---~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 258 (258)
T cd08215 217 KGQYPPI---PSQYSSELRNLVSSLLQKDPEERPSIAQILQSPFI 258 (258)
T ss_pred cCCCCCC---CCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCCCC
Confidence 2221111 12567899999999999999999999999999997
No 305
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=99.95 E-value=1.8e-28 Score=230.64 Aligned_cols=140 Identities=21% Similarity=0.393 Sum_probs=109.8
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC------CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcE
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN------SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENI 77 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~------~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NI 77 (408)
.+.|++++ .+.+ ...+..++||||+.+|. |.+.+. +..++..++.|++.||+|||++||+||||||+||
T Consensus 49 ~l~h~~i~-~~~~~~~~~~~~~lv~e~~~~~~--L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~ni 125 (252)
T cd05084 49 QYSHPNIV-RLIGVCTQKQPIYIVMELVQGGD--FLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNC 125 (252)
T ss_pred hCCCCCcc-eEEEEEcCCCCeEEEEeeccCCc--HHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheE
Confidence 57899866 4443 45567889999999998 777763 3477899999999999999999999999999999
Q ss_pred EEecCCCEEEeccccchhcccCcccc---cCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHh-CCCCCCC
Q psy3880 78 LLDDQMNVKLTDFGFARVLKKGEKLM---DLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPFWH 153 (408)
Q Consensus 78 Ll~~~~~iKl~DFGla~~~~~~~~~~---~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~-G~~pf~~ 153 (408)
+++.++.+||+|||++.......... ...++..|+|||.+.. ..++.++|+||+||++|+|++ |..||..
T Consensus 126 l~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~slG~il~e~~~~~~~p~~~ 199 (252)
T cd05084 126 LVTEKNVLKISDFGMSREEEDGVYASTGGMKQIPVKWTAPEALNY------GRYSSESDVWSFGILLWEAFSLGAVPYAN 199 (252)
T ss_pred EEcCCCcEEECccccCcccccccccccCCCCCCceeecCchhhcC------CCCChHHHHHHHHHHHHHHHhCCCCCccc
Confidence 99999999999999987654322111 1122356999998854 346778999999999999997 8777754
Q ss_pred c
Q psy3880 154 R 154 (408)
Q Consensus 154 ~ 154 (408)
.
T Consensus 200 ~ 200 (252)
T cd05084 200 L 200 (252)
T ss_pred c
Confidence 3
No 306
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.95 E-value=5.5e-29 Score=236.79 Aligned_cols=188 Identities=36% Similarity=0.705 Sum_probs=148.2
Q ss_pred cCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC-----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEec
Q psy3880 9 HSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN-----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDD 81 (408)
Q Consensus 9 ~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~-----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl~~ 81 (408)
|++ |+.+.+ ++++..++|||++.+|. |.+.+. +..++..++.|++.||.|||++|++|+||+|+||+++.
T Consensus 61 ~~~-i~~~~~~~~~~~~~~lv~e~~~~~~--L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~ 137 (280)
T cd05581 61 HPG-IIKLYYTFQDEENLYFVLEYAPNGE--LLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDK 137 (280)
T ss_pred CCC-chhHHHHhcCCceEEEEEcCCCCCc--HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECC
Confidence 887 446554 45567789999999998 777663 44789999999999999999999999999999999999
Q ss_pred CCCEEEeccccchhcccCc---------------------ccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHH
Q psy3880 82 QMNVKLTDFGFARVLKKGE---------------------KLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVI 140 (408)
Q Consensus 82 ~~~iKl~DFGla~~~~~~~---------------------~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvi 140 (408)
++.++++|||++....... ......++..|+|||.+.. ..++.++|+||+||+
T Consensus 138 ~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~------~~~~~~~Di~slG~~ 211 (280)
T cd05581 138 DMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNE------KPAGKSSDLWALGCI 211 (280)
T ss_pred CCCEEecCCccccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCC------CCCChhhhHHHHHHH
Confidence 9999999999987654322 1123457889999998764 236778999999999
Q ss_pred HHHHHhCCCCCCCchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCC
Q psy3880 141 MYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPP 220 (408)
Q Consensus 141 l~~ll~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~P 220 (408)
++++++|..||...+....+..+.
T Consensus 212 l~~l~~g~~p~~~~~~~~~~~~~~-------------------------------------------------------- 235 (280)
T cd05581 212 IYQMLTGKPPFRGSNEYLTFQKIL-------------------------------------------------------- 235 (280)
T ss_pred HHHHHhCCCCCCCccHHHHHHHHH--------------------------------------------------------
Confidence 999999999986654333322222
Q ss_pred CCCchhHHHHHHHHhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCH----HHHHcCCCC
Q psy3880 221 FWHRKQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSV----KEALNHSFF 279 (408)
Q Consensus 221 f~~~~~~~~~~~i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta----~e~L~Hpwf 279 (408)
.....++ ..+++++.+||.+||..||++|||+ +++|+||||
T Consensus 236 --------------~~~~~~~----~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~~~ 280 (280)
T cd05581 236 --------------KLEYSFP----PNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPFF 280 (280)
T ss_pred --------------hcCCCCC----CccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcCCCC
Confidence 2222222 2357889999999999999999999 999999998
No 307
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=99.95 E-value=2.1e-28 Score=234.49 Aligned_cols=143 Identities=24% Similarity=0.370 Sum_probs=114.9
Q ss_pred ccccCCcEEEEeccCCcHHHHHHHHHhhchhhHHhhhC------CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEE
Q psy3880 6 MVAHSRVVVRVKEEGDDLKHLAAQVVDKGEAAVQDIIN------SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILL 79 (408)
Q Consensus 6 ~~~~~~~i~~~~~~~~~~~~lv~e~~~~g~~~l~~~~~------~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl 79 (408)
.+.|+|+|.-+........++++||+.+|. |.+.+. +.+.+..++.||+.||+|||++|++||||||+|||+
T Consensus 65 ~l~h~~iv~~~~~~~~~~~~~i~e~~~~gs--L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili 142 (279)
T cd05111 65 SLDHAYIVRLLGICPGASLQLVTQLSPLGS--LLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILL 142 (279)
T ss_pred cCCCCCcceEEEEECCCccEEEEEeCCCCc--HHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEE
Confidence 468998654343444455789999999998 887764 346889999999999999999999999999999999
Q ss_pred ecCCCEEEeccccchhcccCcc---cccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHh-CCCCCCCch
Q psy3880 80 DDQMNVKLTDFGFARVLKKGEK---LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPFWHRK 155 (408)
Q Consensus 80 ~~~~~iKl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~-G~~pf~~~~ 155 (408)
+.++.+||+|||+++.+..... .....++..|+|||.+.. ..++.++|+|||||++|++++ |..||.+..
T Consensus 143 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~------~~~~~~~Dv~slG~il~el~t~g~~p~~~~~ 216 (279)
T cd05111 143 KSDSIVQIADFGVADLLYPDDKKYFYSEHKTPIKWMALESILF------GRYTHQSDVWSYGVTVWEMMSYGAEPYAGMR 216 (279)
T ss_pred cCCCcEEEcCCccceeccCCCcccccCCCCCcccccCHHHhcc------CCcCchhhHHHHHHHHHHHHcCCCCCCCCCC
Confidence 9999999999999976543321 123456778999999864 347889999999999999998 988886654
Q ss_pred h
Q psy3880 156 Q 156 (408)
Q Consensus 156 ~ 156 (408)
.
T Consensus 217 ~ 217 (279)
T cd05111 217 P 217 (279)
T ss_pred H
Confidence 3
No 308
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=99.95 E-value=2.1e-28 Score=232.11 Aligned_cols=189 Identities=23% Similarity=0.345 Sum_probs=142.8
Q ss_pred ccccCCcEEEEeccCCcHHHHHHHHHhhchhhHHhhhC-------CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEE
Q psy3880 6 MVAHSRVVVRVKEEGDDLKHLAAQVVDKGEAAVQDIIN-------SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENIL 78 (408)
Q Consensus 6 ~~~~~~~i~~~~~~~~~~~~lv~e~~~~g~~~l~~~~~-------~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NIL 78 (408)
.+.|++++..+....++..++||||+.+|. |.+.+. +.+.+..++.|++.||+|||+++|+||||||+||+
T Consensus 57 ~l~~~~i~~~~~~~~~~~~~lv~e~~~~~~--L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nil 134 (262)
T cd05071 57 KLRHEKLVQLYAVVSEEPIYIVTEYMSKGS--LLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANIL 134 (262)
T ss_pred hCCCCCcceEEEEECCCCcEEEEEcCCCCc--HHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEE
Confidence 467888664443344556789999999998 777764 33678899999999999999999999999999999
Q ss_pred EecCCCEEEeccccchhcccCccc--ccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHh-CCCCCCCch
Q psy3880 79 LDDQMNVKLTDFGFARVLKKGEKL--MDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPFWHRK 155 (408)
Q Consensus 79 l~~~~~iKl~DFGla~~~~~~~~~--~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~-G~~pf~~~~ 155 (408)
++.++.+||+|||++..+...... ....++..|+|||.+.. ..++.++|+||+||++|++++ |..||.+..
T Consensus 135 l~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~------~~~~~~~DvwslG~~l~ellt~g~~p~~~~~ 208 (262)
T cd05071 135 VGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY------GRFTIKSDVWSFGILLTELTTKGRVPYPGMV 208 (262)
T ss_pred EcCCCcEEeccCCceeeccccccccccCCcccceecCHhHhcc------CCCCchhhHHHHHHHHHHHHcCCCCCCCCCC
Confidence 999999999999999766543321 12345678999998753 346788999999999999998 777886554
Q ss_pred hHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHh
Q psy3880 156 QMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIME 235 (408)
Q Consensus 156 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~ 235 (408)
.......+..+
T Consensus 209 ~~~~~~~~~~~--------------------------------------------------------------------- 219 (262)
T cd05071 209 NREVLDQVERG--------------------------------------------------------------------- 219 (262)
T ss_pred hHHHHHHHhcC---------------------------------------------------------------------
Confidence 43333322211
Q ss_pred cCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHc
Q psy3880 236 GKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALN 275 (408)
Q Consensus 236 ~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~ 275 (408)
. .. +.-..++.++.+||.+||..||++|||+.++++
T Consensus 220 -~-~~--~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~ 255 (262)
T cd05071 220 -Y-RM--PCPPECPESLHDLMCQCWRKEPEERPTFEYLQA 255 (262)
T ss_pred -C-CC--CCccccCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 0 00 001245778999999999999999999998865
No 309
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=99.95 E-value=1.9e-28 Score=229.53 Aligned_cols=193 Identities=30% Similarity=0.501 Sum_probs=149.4
Q ss_pred ccccCCcEEEEe-ccCCcHHHHHHHHHhhchhhHHhhhC-----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEE
Q psy3880 6 MVAHSRVVVRVK-EEGDDLKHLAAQVVDKGEAAVQDIIN-----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILL 79 (408)
Q Consensus 6 ~~~~~~~i~~~~-~~~~~~~~lv~e~~~~g~~~l~~~~~-----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl 79 (408)
.+.|++++..+. ...+...++++|++.++. |.+.+. +...+..++.|++.||.|||++||+||||||+||++
T Consensus 55 ~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~--L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i 132 (254)
T cd06627 55 NLKHPNIVKYIGSIETSDSLYIILEYAENGS--LRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILT 132 (254)
T ss_pred hCCCCCccEEEEEEEeCCEEEEEEecCCCCc--HHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEE
Confidence 357887553332 244567789999999987 777653 457888999999999999999999999999999999
Q ss_pred ecCCCEEEeccccchhcccCcc-cccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHH
Q psy3880 80 DDQMNVKLTDFGFARVLKKGEK-LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMV 158 (408)
Q Consensus 80 ~~~~~iKl~DFGla~~~~~~~~-~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~ 158 (408)
+.++.++|+|||++........ .....++..|+|||.+.. ..++.++|+||+|+++|+|++|..||...+...
T Consensus 133 ~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~------~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~ 206 (254)
T cd06627 133 TKDGVVKLADFGVATKLNDVSKDDASVVGTPYWMAPEVIEM------SGASTASDIWSLGCTVIELLTGNPPYYDLNPMA 206 (254)
T ss_pred CCCCCEEEeccccceecCCCcccccccccchhhcCHhhhcC------CCCCcchhHHHHHHHHHHHHhCCCCCCCccHHH
Confidence 9999999999999987654332 234578899999998754 236789999999999999999999986543222
Q ss_pred HHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCC
Q psy3880 159 MLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKY 238 (408)
Q Consensus 159 ~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~ 238 (408)
...++.. ....
T Consensus 207 ~~~~~~~---------------------------------------------------------------------~~~~ 217 (254)
T cd06627 207 ALFRIVQ---------------------------------------------------------------------DDHP 217 (254)
T ss_pred HHHHHhc---------------------------------------------------------------------cCCC
Confidence 1111110 0000
Q ss_pred CCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q psy3880 239 SFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFF 279 (408)
Q Consensus 239 ~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf 279 (408)
.....++++++++|.+||..||++|||+.++++||||
T Consensus 218 ----~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~~ 254 (254)
T cd06627 218 ----PLPEGISPELKDFLMQCFQKDPNLRPTAKQLLKHPWI 254 (254)
T ss_pred ----CCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhcCCCC
Confidence 1113568899999999999999999999999999998
No 310
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=99.95 E-value=9.4e-29 Score=236.30 Aligned_cols=195 Identities=28% Similarity=0.468 Sum_probs=150.9
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEE
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILL 79 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl 79 (408)
.+.|++++ .+.. ..++..|+|+||+.+|. |.+++. +...+..++.|++.|+.|||++|++|+||||+||++
T Consensus 58 ~l~h~~iv-~~~~~~~~~~~~~lv~e~~~~~~--l~~~i~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i 134 (277)
T cd06641 58 QCDSPYVT-KYYGSYLKDTKLWIIMEYLGGGS--ALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLL 134 (277)
T ss_pred hcCCCCEe-EEEEEEEeCCeEEEEEEeCCCCc--HHHHHhcCCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEE
Confidence 56788755 5543 45567899999999988 777663 457889999999999999999999999999999999
Q ss_pred ecCCCEEEeccccchhcccCc-ccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHH
Q psy3880 80 DDQMNVKLTDFGFARVLKKGE-KLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMV 158 (408)
Q Consensus 80 ~~~~~iKl~DFGla~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~ 158 (408)
+.++.++|+|||++..+.... ......++..|+|||.+.. ..++.++|+||+||++|+|++|..||.......
T Consensus 135 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~------~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~ 208 (277)
T cd06641 135 SEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQ------SAYDSKADIWSLGITAIELAKGEPPHSELHPMK 208 (277)
T ss_pred CCCCCEEEeecccceecccchhhhccccCCccccChhhhcc------CCCCchhhHHHHHHHHHHHHcCCCCCCccchHH
Confidence 999999999999987654322 1223568889999998864 345678999999999999999999986543322
Q ss_pred HHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCC
Q psy3880 159 MLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKY 238 (408)
Q Consensus 159 ~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~ 238 (408)
....+.. +.+|
T Consensus 209 ~~~~~~~---------------------------------------------------~~~~------------------ 219 (277)
T cd06641 209 VLFLIPK---------------------------------------------------NNPP------------------ 219 (277)
T ss_pred HHHHHhc---------------------------------------------------CCCC------------------
Confidence 2221111 0000
Q ss_pred CCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q psy3880 239 SFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPK 282 (408)
Q Consensus 239 ~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~ 282 (408)
.+ -..++.++.++|.+||..||.+||++.++++||||...
T Consensus 220 ~~----~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~~~~ 259 (277)
T cd06641 220 TL----EGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFIVRF 259 (277)
T ss_pred CC----CcccCHHHHHHHHHHccCChhhCcCHHHHHhCHHHhhh
Confidence 00 02357889999999999999999999999999999764
No 311
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.95 E-value=1.3e-28 Score=233.56 Aligned_cols=193 Identities=25% Similarity=0.458 Sum_probs=146.0
Q ss_pred ccccCCcEEEEec---cCCcHHHHHHHHHhhchhhHHhhhC-----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcE
Q psy3880 6 MVAHSRVVVRVKE---EGDDLKHLAAQVVDKGEAAVQDIIN-----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENI 77 (408)
Q Consensus 6 ~~~~~~~i~~~~~---~~~~~~~lv~e~~~~g~~~l~~~~~-----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NI 77 (408)
.+.|++++..+.. ......++++||+.++. |.+.+. +...++.++.|++.||.|||++|++||||||+||
T Consensus 60 ~l~h~~i~~~~~~~~~~~~~~~~~v~e~~~~~~--L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni 137 (264)
T cd06653 60 NLRHDRIVQYYGCLRDPEEKKLSIFVEYMPGGS--IKDQLKAYGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANI 137 (264)
T ss_pred HcCCCCcceEEEEEEcCCCCEEEEEEEeCCCCc--HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHE
Confidence 4689886633322 12345678999999987 766653 3578889999999999999999999999999999
Q ss_pred EEecCCCEEEeccccchhcccC----cccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCC
Q psy3880 78 LLDDQMNVKLTDFGFARVLKKG----EKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH 153 (408)
Q Consensus 78 Ll~~~~~iKl~DFGla~~~~~~----~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~ 153 (408)
+++.++.++|+|||+++..... .......|+..|+|||.+.. ..++.++|+||+||++|++++|..||..
T Consensus 138 ~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~~l~~g~~p~~~ 211 (264)
T cd06653 138 LRDSAGNVKLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPEVISG------EGYGRKADVWSVACTVVEMLTEKPPWAE 211 (264)
T ss_pred EEcCCCCEEECccccccccccccccCccccccCCcccccCHhhhcC------CCCCccccHHHHHHHHHHHHhCCCCCCc
Confidence 9999999999999999765321 11234568899999999864 3467899999999999999999999965
Q ss_pred chhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHH
Q psy3880 154 RKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI 233 (408)
Q Consensus 154 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i 233 (408)
......+.++..
T Consensus 212 ~~~~~~~~~~~~-------------------------------------------------------------------- 223 (264)
T cd06653 212 YEAMAAIFKIAT-------------------------------------------------------------------- 223 (264)
T ss_pred cCHHHHHHHHHc--------------------------------------------------------------------
Confidence 433322222111
Q ss_pred HhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q psy3880 234 MEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFF 279 (408)
Q Consensus 234 ~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf 279 (408)
... .......++++++++|.+||+ +|.+|||+.++|+|||.
T Consensus 224 --~~~--~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~~~~ 264 (264)
T cd06653 224 --QPT--KPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRHPFV 264 (264)
T ss_pred --CCC--CCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhcCCCC
Confidence 000 001123578899999999999 68999999999999984
No 312
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=99.95 E-value=2.2e-28 Score=235.28 Aligned_cols=187 Identities=20% Similarity=0.377 Sum_probs=134.3
Q ss_pred ccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC---------------------CHHHHHHHHHHHHHHHHHHHH
Q psy3880 8 AHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN---------------------SNPALRYIMRQLFEALEHVHN 64 (408)
Q Consensus 8 ~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~---------------------~~~~~r~i~~qil~aL~~LH~ 64 (408)
.|++++ .+.. ..++..+++|||+.+|. |.+++. +...+..++.|++.||+|||+
T Consensus 74 ~h~~i~-~~~~~~~~~~~~~li~e~~~~~~--L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~ 150 (293)
T cd05053 74 KHKNII-NLLGVCTQEGPLYVVVEYAAHGN--LRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLAS 150 (293)
T ss_pred CCCCee-eEEEEEcCCCCeEEEEEeCCCCc--HHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHH
Confidence 688755 5443 45566899999999998 776652 336778899999999999999
Q ss_pred CCCeeccCCCCcEEEecCCCEEEeccccchhcccCccc---ccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHH
Q psy3880 65 HSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKL---MDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIM 141 (408)
Q Consensus 65 ~~IvHRDLKp~NILl~~~~~iKl~DFGla~~~~~~~~~---~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil 141 (408)
+||+||||||+|||++.++.+||+|||+++.+...... ....++..|+|||.+.. ..++.++|+||+||++
T Consensus 151 ~~ivH~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il 224 (293)
T cd05053 151 KKCIHRDLAARNVLVTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFD------RVYTHQSDVWSFGVLL 224 (293)
T ss_pred CCccccccceeeEEEcCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhcc------CCcCcccceeehhhHH
Confidence 99999999999999999999999999999876543211 12234567999998753 2345566666666666
Q ss_pred HHHHh-CCCCCCCchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCC
Q psy3880 142 YTLLV-GCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPP 220 (408)
Q Consensus 142 ~~ll~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~P 220 (408)
|++++ |..||.
T Consensus 225 ~el~~~g~~p~~-------------------------------------------------------------------- 236 (293)
T cd05053 225 WEIFTLGGSPYP-------------------------------------------------------------------- 236 (293)
T ss_pred HHHhcCCCCCCC--------------------------------------------------------------------
Confidence 66654 555553
Q ss_pred CCCchhHHHHHHHHhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcC
Q psy3880 221 FWHRKQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNH 276 (408)
Q Consensus 221 f~~~~~~~~~~~i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~H 276 (408)
+....+....+..+. ... .....+.++.+||.+||..||++|||++|++++
T Consensus 237 --~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~ 287 (293)
T cd05053 237 --GIPVEELFKLLKEGY-RME--KPQNCTQELYHLMRDCWHEVPSQRPTFKQLVED 287 (293)
T ss_pred --CCCHHHHHHHHHcCC-cCC--CCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence 333333333333221 111 123568899999999999999999999999874
No 313
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=99.95 E-value=1.8e-28 Score=228.48 Aligned_cols=192 Identities=28% Similarity=0.519 Sum_probs=143.0
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC------CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcE
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN------SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENI 77 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~------~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NI 77 (408)
.+.|++++ .+.+ ..++..++++||+.|+. |.+.+. +...+..++.|++.||.+||++|++|+||+|+||
T Consensus 53 ~l~~~~i~-~~~~~~~~~~~~~l~~e~~~~~~--L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni 129 (253)
T cd05122 53 KCKHPNIV-KYYGSYLKKDELWIVMEFCSGGS--LKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANI 129 (253)
T ss_pred hCCCCCEe-EEEEEEecCCeEEEEEecCCCCc--HHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHE
Confidence 45688755 5444 44567789999999887 766543 4478899999999999999999999999999999
Q ss_pred EEecCCCEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhH
Q psy3880 78 LLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 157 (408)
Q Consensus 78 Ll~~~~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~ 157 (408)
+++.++.++|+|||++.............++..|+|||.+... .++.++|+||+|+++|+|++|..||...+..
T Consensus 130 ~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~------~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~ 203 (253)
T cd05122 130 LLTSDGEVKLIDFGLSAQLSDTKARNTMVGTPYWMAPEVINGK------PYDYKADIWSLGITAIELAEGKPPYSELPPM 203 (253)
T ss_pred EEccCCeEEEeeccccccccccccccceecCCcccCHHHHcCC------CCCccccHHHHHHHHHHHHhCCCCCCCCchH
Confidence 9999999999999999876654333456788999999988642 2566788888888888888877777443211
Q ss_pred HHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhc-
Q psy3880 158 VMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEG- 236 (408)
Q Consensus 158 ~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~- 236 (408)
.....+...
T Consensus 204 ----------------------------------------------------------------------~~~~~~~~~~ 213 (253)
T cd05122 204 ----------------------------------------------------------------------KALFKIATNG 213 (253)
T ss_pred ----------------------------------------------------------------------HHHHHHHhcC
Confidence 111111111
Q ss_pred CCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCC
Q psy3880 237 KYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSF 278 (408)
Q Consensus 237 ~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpw 278 (408)
..... ....++.++.++|.+||+.||++|||+.|+|+|||
T Consensus 214 ~~~~~--~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~~~ 253 (253)
T cd05122 214 PPGLR--NPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKHPF 253 (253)
T ss_pred CCCcC--cccccCHHHHHHHHHHccCChhhCCCHHHHhcCCC
Confidence 11111 11124788999999999999999999999999999
No 314
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=99.95 E-value=1.3e-28 Score=232.10 Aligned_cols=197 Identities=27% Similarity=0.513 Sum_probs=150.6
Q ss_pred cccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC-----CHHHHHHHHHHHHHHHHHHHH-CCCeeccCCCCcEE
Q psy3880 7 VAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN-----SNPALRYIMRQLFEALEHVHN-HSVVHRDLKPENIL 78 (408)
Q Consensus 7 ~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~-----~~~~~r~i~~qil~aL~~LH~-~~IvHRDLKp~NIL 78 (408)
+.|++++ .+.+ ..++..++|+||+.++. |.+.+. ++..+..++.|++.||+|||+ ++++||||+|+||+
T Consensus 56 l~~~~i~-~~~~~~~~~~~~~lv~e~~~~~~--L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~ 132 (264)
T cd06623 56 CESPYVV-KCYGAFYKEGEISIVLEYMDGGS--LADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLL 132 (264)
T ss_pred cCCCCee-eEEEEEccCCeEEEEEEecCCCc--HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEE
Confidence 4588755 5543 45567899999999998 877764 457889999999999999999 99999999999999
Q ss_pred EecCCCEEEeccccchhcccCcccc-cCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhH
Q psy3880 79 LDDQMNVKLTDFGFARVLKKGEKLM-DLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 157 (408)
Q Consensus 79 l~~~~~iKl~DFGla~~~~~~~~~~-~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~ 157 (408)
++.++.++|+|||++.......... ...++..|+|||.+.. ..++.++|+||||+++|+|++|..||......
T Consensus 133 ~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~------~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~ 206 (264)
T cd06623 133 INSKGEVKIADFGISKVLENTLDQCNTFVGTVTYMSPERIQG------ESYSYAADIWSLGLTLLECALGKFPFLPPGQP 206 (264)
T ss_pred ECCCCCEEEccCccceecccCCCcccceeecccccCHhhhCC------CCCCchhhHHHHHHHHHHHHhCCCCCcccccc
Confidence 9999999999999988765433222 4567889999998754 35678999999999999999999998654210
Q ss_pred HHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcC
Q psy3880 158 VMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 237 (408)
Q Consensus 158 ~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~ 237 (408)
. .......+....
T Consensus 207 ~-------------------------------------------------------------------~~~~~~~~~~~~ 219 (264)
T cd06623 207 S-------------------------------------------------------------------FFELMQAICDGP 219 (264)
T ss_pred C-------------------------------------------------------------------HHHHHHHHhcCC
Confidence 0 001111111111
Q ss_pred CCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCC
Q psy3880 238 YSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHP 281 (408)
Q Consensus 238 ~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~ 281 (408)
... .....++..+.++|.+||..+|++|||+.|+++||||+.
T Consensus 220 ~~~--~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~~~~~~ 261 (264)
T cd06623 220 PPS--LPAEEFSPEFRDFISACLQKDPKKRPSAAELLQHPFIKK 261 (264)
T ss_pred CCC--CCcccCCHHHHHHHHHHccCChhhCCCHHHHHhCHHHHh
Confidence 000 001126788999999999999999999999999999964
No 315
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.95 E-value=4.2e-28 Score=236.47 Aligned_cols=186 Identities=20% Similarity=0.362 Sum_probs=141.3
Q ss_pred ccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC---------------------CHHHHHHHHHHHHHHHHHHHH
Q psy3880 8 AHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN---------------------SNPALRYIMRQLFEALEHVHN 64 (408)
Q Consensus 8 ~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~---------------------~~~~~r~i~~qil~aL~~LH~ 64 (408)
.|+++| .+.+ ..++..|+||||+.+|. |.+++. +..++..++.||+.||.|||+
T Consensus 76 ~h~~iv-~~~~~~~~~~~~~lv~e~~~~g~--L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~ 152 (314)
T cd05099 76 KHKNII-NLLGVCTQEGPLYVIVEYAAKGN--LREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLES 152 (314)
T ss_pred CCCCee-eEEEEEccCCceEEEEecCCCCc--HHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHH
Confidence 588755 5554 44566789999999998 777663 235678899999999999999
Q ss_pred CCCeeccCCCCcEEEecCCCEEEeccccchhcccCcc---cccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHH
Q psy3880 65 HSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEK---LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIM 141 (408)
Q Consensus 65 ~~IvHRDLKp~NILl~~~~~iKl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil 141 (408)
+||+||||||+|||++.++.+||+|||+++....... .....+++.|+|||.+.. ..++.++|+||+||++
T Consensus 153 ~gi~H~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~------~~~~~~~DiwslG~~l 226 (314)
T cd05099 153 RRCIHRDLAARNVLVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFD------RVYTHQSDVWSFGILM 226 (314)
T ss_pred CCeeeccccceeEEEcCCCcEEEccccccccccccccccccccCCCCccccCHHHHcc------CCcCccchhhHHHHHH
Confidence 9999999999999999999999999999986543221 112234467999998864 3577899999999999
Q ss_pred HHHHh-CCCCCCCchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCC
Q psy3880 142 YTLLV-GCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPP 220 (408)
Q Consensus 142 ~~ll~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~P 220 (408)
|++++ |..||.+.+..+....+..+
T Consensus 227 ~el~~~g~~p~~~~~~~~~~~~~~~~------------------------------------------------------ 252 (314)
T cd05099 227 WEIFTLGGSPYPGIPVEELFKLLREG------------------------------------------------------ 252 (314)
T ss_pred HHHHhCCCCCCCCCCHHHHHHHHHcC------------------------------------------------------
Confidence 99998 88888665443333332211
Q ss_pred CCCchhHHHHHHHHhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHc
Q psy3880 221 FWHRKQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALN 275 (408)
Q Consensus 221 f~~~~~~~~~~~i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~ 275 (408)
. ... ....++.++++||.+||..||++|||+.|+++
T Consensus 253 ----------------~-~~~--~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~ 288 (314)
T cd05099 253 ----------------H-RMD--KPSNCTHELYMLMRECWHAVPTQRPTFKQLVE 288 (314)
T ss_pred ----------------C-CCC--CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 0 000 01245778999999999999999999999885
No 316
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.95 E-value=1.6e-28 Score=237.06 Aligned_cols=202 Identities=25% Similarity=0.353 Sum_probs=142.6
Q ss_pred ccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhh---CCHHHHHHHHHHHHHHHHHHHH-CCCeeccCCCCcEEEec
Q psy3880 8 AHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDII---NSNPALRYIMRQLFEALEHVHN-HSVVHRDLKPENILLDD 81 (408)
Q Consensus 8 ~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~---~~~~~~r~i~~qil~aL~~LH~-~~IvHRDLKp~NILl~~ 81 (408)
.|++++ .+.+ ..+...|+||||+.+....+.... .+...+..++.|++.||+|||+ +||+||||+|+||++++
T Consensus 72 ~~~~i~-~~~~~~~~~~~~~~v~e~~~~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~ 150 (296)
T cd06618 72 DCPYIV-KCYGYFITDSDVFICMELMSTCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDA 150 (296)
T ss_pred CCCchH-hhheeeecCCeEEEEeeccCcCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcC
Confidence 577754 5544 344567899999865322233332 2456778899999999999997 69999999999999999
Q ss_pred CCCEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHHHHH
Q psy3880 82 QMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLR 161 (408)
Q Consensus 82 ~~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~~~~ 161 (408)
++.+||+|||++..+..........+++.|+|||.+..... ...++.++|+||+||++|+|++|..||......
T Consensus 151 ~~~~kL~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~--~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~---- 224 (296)
T cd06618 151 SGNVKLCDFGISGRLVDSKAKTRSAGCAAYMAPERIDPPDP--NPKYDIRADVWSLGISLVELATGQFPYKNCKTE---- 224 (296)
T ss_pred CCCEEECccccchhccCCCcccCCCCCccccCHhhcCCCCC--ccccccchhHHHHHHHHHHHHhCCCCCCcchhH----
Confidence 99999999999977654333334567889999999864311 134567788888888888888888777442111
Q ss_pred HHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCCCCC
Q psy3880 162 NIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFS 241 (408)
Q Consensus 162 ~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~~f~ 241 (408)
.+.+..+.......
T Consensus 225 -----------------------------------------------------------------~~~~~~~~~~~~~~- 238 (296)
T cd06618 225 -----------------------------------------------------------------FEVLTKILQEEPPS- 238 (296)
T ss_pred -----------------------------------------------------------------HHHHHHHhcCCCCC-
Confidence 11111222111110
Q ss_pred CCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q psy3880 242 SPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPK 282 (408)
Q Consensus 242 ~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~ 282 (408)
.+....++.++++||.+||..||++|||++++++||||...
T Consensus 239 ~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 279 (296)
T cd06618 239 LPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPFIRRY 279 (296)
T ss_pred CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcChhhhcc
Confidence 11112468889999999999999999999999999999754
No 317
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=99.95 E-value=3e-28 Score=230.04 Aligned_cols=188 Identities=22% Similarity=0.397 Sum_probs=142.8
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC-------CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCc
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN-------SNPALRYIMRQLFEALEHVHNHSVVHRDLKPEN 76 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~-------~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~N 76 (408)
.+.|++++ .+.+ .+.+..++||||+.+|. |.+.+. +.+.+..++.||+.||+|||++||+||||||+|
T Consensus 58 ~l~~~~i~-~~~~~~~~~~~~~lv~e~~~~~~--L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~n 134 (261)
T cd05148 58 RLRHKHLI-SLFAVCSVGEPVYIITELMEKGS--LLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARN 134 (261)
T ss_pred cCCCcchh-heeeeEecCCCeEEEEeecccCC--HHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcce
Confidence 45788765 4443 45567899999999998 888764 347789999999999999999999999999999
Q ss_pred EEEecCCCEEEeccccchhcccCccc-ccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHh-CCCCCCCc
Q psy3880 77 ILLDDQMNVKLTDFGFARVLKKGEKL-MDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPFWHR 154 (408)
Q Consensus 77 ILl~~~~~iKl~DFGla~~~~~~~~~-~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~-G~~pf~~~ 154 (408)
|+++.++.+||+|||++......... ....++..|+|||.+.. ..++.++|+||+||++|+|++ |..||.+.
T Consensus 135 ilv~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~PE~~~~------~~~~~~~DiwslG~~l~~l~~~g~~p~~~~ 208 (261)
T cd05148 135 ILVGEDLVCKVADFGLARLIKEDVYLSSDKKIPYKWTAPEAASH------GTFSTKSDVWSFGILLYEMFTYGQVPYPGM 208 (261)
T ss_pred EEEcCCceEEEccccchhhcCCccccccCCCCceEecCHHHHcc------CCCCchhhHHHHHHHHHHHHcCCCCCCCcC
Confidence 99999999999999999776433211 12345668999998854 346678899998888888887 77887655
Q ss_pred hhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHH
Q psy3880 155 KQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIM 234 (408)
Q Consensus 155 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~ 234 (408)
+..+.+..+..
T Consensus 209 ~~~~~~~~~~~--------------------------------------------------------------------- 219 (261)
T cd05148 209 NNHEVYDQITA--------------------------------------------------------------------- 219 (261)
T ss_pred CHHHHHHHHHh---------------------------------------------------------------------
Confidence 44333333221
Q ss_pred hcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHc
Q psy3880 235 EGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALN 275 (408)
Q Consensus 235 ~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~ 275 (408)
+ +.. +.....++++.++|.+||+.||.+|||+.++++
T Consensus 220 -~-~~~--~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~ 256 (261)
T cd05148 220 -G-YRM--PCPAKCPQEIYKIMLECWAAEPEDRPSFKALRE 256 (261)
T ss_pred -C-CcC--CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 1 111 112356888999999999999999999999875
No 318
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=99.95 E-value=3.2e-28 Score=229.92 Aligned_cols=189 Identities=21% Similarity=0.355 Sum_probs=140.6
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC------CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcE
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN------SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENI 77 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~------~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NI 77 (408)
.+.|+|+|..+.. ..++..++|+||+.+|. |.+.+. +...+..++.|++.||+|||+++|+||||||+||
T Consensus 52 ~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~--L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~ni 129 (262)
T cd05058 52 DFSHPNVLSLLGICLPSEGSPLVVLPYMKHGD--LRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNC 129 (262)
T ss_pred cCCCCCcceEEEEeecCCCCcEEEEecCCCCC--HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceE
Confidence 5789986643332 34556789999999998 877763 2356778889999999999999999999999999
Q ss_pred EEecCCCEEEeccccchhcccCcc-----cccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhC-CCCC
Q psy3880 78 LLDDQMNVKLTDFGFARVLKKGEK-----LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVG-CPPF 151 (408)
Q Consensus 78 Ll~~~~~iKl~DFGla~~~~~~~~-----~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G-~~pf 151 (408)
|++.++.+||+|||+++.+..... .....+++.|+|||.+.. ..++.++|+|||||++|+|++| .+||
T Consensus 130 li~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~~l~el~~~~~~~~ 203 (262)
T cd05058 130 MLDESFTVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALESLQT------QKFTTKSDVWSFGVLLWELMTRGAPPY 203 (262)
T ss_pred EEcCCCcEEECCccccccccCCcceeecccccCcCCccccChhHhcc------CccchHHHHHHHHHHHHHHHcCCCCCC
Confidence 999999999999999876543211 112345678999998854 3577899999999999999994 5666
Q ss_pred CCchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHH
Q psy3880 152 WHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLR 231 (408)
Q Consensus 152 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~ 231 (408)
...+.......+..+
T Consensus 204 ~~~~~~~~~~~~~~~----------------------------------------------------------------- 218 (262)
T cd05058 204 PDVDSFDITVYLLQG----------------------------------------------------------------- 218 (262)
T ss_pred CCCCHHHHHHHHhcC-----------------------------------------------------------------
Confidence 544333322222111
Q ss_pred HHHhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHc
Q psy3880 232 NIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALN 275 (408)
Q Consensus 232 ~i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~ 275 (408)
.. ...+ ..+++.+++++.+||..||++|||+.|+++
T Consensus 219 -----~~-~~~~--~~~~~~~~~li~~cl~~~p~~Rp~~~~il~ 254 (262)
T cd05058 219 -----RR-LLQP--EYCPDPLYEVMLSCWHPKPEMRPTFSELVS 254 (262)
T ss_pred -----CC-CCCC--CcCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 00 0001 235778999999999999999999999986
No 319
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=99.95 E-value=2.4e-28 Score=231.11 Aligned_cols=136 Identities=19% Similarity=0.299 Sum_probs=108.6
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC------CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcE
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN------SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENI 77 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~------~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NI 77 (408)
.+.|+|+| .+.. ..++..++||||+.+|. |.+.+. +...+..++.||+.||+|||++||+||||||+||
T Consensus 55 ~~~h~~iv-~~~~~~~~~~~~~lv~e~~~~g~--L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~ni 131 (258)
T cd05078 55 QLSHKHLV-LNYGVCVCGDESIMVQEYVKFGS--LDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNV 131 (258)
T ss_pred hCCCCChh-heeeEEEeCCCcEEEEecCCCCc--HHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceE
Confidence 46899866 4443 34466789999999998 777663 3467788999999999999999999999999999
Q ss_pred EEecCCC--------EEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCC-
Q psy3880 78 LLDDQMN--------VKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGC- 148 (408)
Q Consensus 78 Ll~~~~~--------iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~- 148 (408)
|++.++. ++++|||++...... ....+++.|+|||++.. ...++.++|+||+||++|+|++|.
T Consensus 132 li~~~~~~~~~~~~~~~l~d~g~~~~~~~~---~~~~~~~~y~aPE~~~~-----~~~~~~~~DiwslG~~l~~l~~g~~ 203 (258)
T cd05078 132 LLIREEDRKTGNPPFIKLSDPGISITVLPK---EILLERIPWVPPECIEN-----PQNLSLAADKWSFGTTLWEIFSGGD 203 (258)
T ss_pred EEecccccccCCCceEEecccccccccCCc---hhccccCCccCchhccC-----CCCCCchhhHHHHHHHHHHHHcCCC
Confidence 9987654 699999998765432 23568889999999864 234678999999999999999985
Q ss_pred CCCC
Q psy3880 149 PPFW 152 (408)
Q Consensus 149 ~pf~ 152 (408)
.||.
T Consensus 204 ~~~~ 207 (258)
T cd05078 204 KPLS 207 (258)
T ss_pred CChh
Confidence 5543
No 320
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=99.95 E-value=3e-28 Score=231.42 Aligned_cols=138 Identities=22% Similarity=0.337 Sum_probs=108.8
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhh------CCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcE
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDII------NSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENI 77 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~------~~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NI 77 (408)
.+.|+|+| .+.. ..+...++||||+.+|. |...+ .+...+..++.||+.||+|||++||+||||||+||
T Consensus 60 ~l~hp~iv-~~~~~~~~~~~~~lv~e~~~~~~--l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Ni 136 (262)
T cd05077 60 QVSHKHIV-LLYGVCVRDVENIMVEEFVEFGP--LDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNI 136 (262)
T ss_pred hCCCCCEe-eEEEEEecCCCCEEEEecccCCC--HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccE
Confidence 46899855 5543 45566789999999997 43333 24478889999999999999999999999999999
Q ss_pred EEecCCC-------EEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHH-hCCC
Q psy3880 78 LLDDQMN-------VKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLL-VGCP 149 (408)
Q Consensus 78 Ll~~~~~-------iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll-~G~~ 149 (408)
|++.++. +|++|||++...... ....++..|+|||.+.. ...++.++||||+||++|+|+ .|..
T Consensus 137 ll~~~~~~~~~~~~~~l~d~g~~~~~~~~---~~~~~~~~y~aPE~~~~-----~~~~~~~~DiwslG~~l~el~~~~~~ 208 (262)
T cd05077 137 LLAREGIDGECGPFIKLSDPGIPITVLSR---QECVERIPWIAPECVED-----SKNLSIAADKWSFGTTLWEICYNGEI 208 (262)
T ss_pred EEecCCccCCCCceeEeCCCCCCccccCc---ccccccccccChhhhcC-----CCCCCchhHHHHHHHHHHHHHhCCCC
Confidence 9986653 899999998654322 23567889999998753 245788999999999999998 5877
Q ss_pred CCCCc
Q psy3880 150 PFWHR 154 (408)
Q Consensus 150 pf~~~ 154 (408)
||...
T Consensus 209 p~~~~ 213 (262)
T cd05077 209 PLKDK 213 (262)
T ss_pred CCCCc
Confidence 77543
No 321
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.95 E-value=2.4e-28 Score=228.51 Aligned_cols=193 Identities=33% Similarity=0.548 Sum_probs=148.8
Q ss_pred ccccCCcEEEEec--cCC--cHHHHHHHHHhhchhhHHhhhC-----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCc
Q psy3880 6 MVAHSRVVVRVKE--EGD--DLKHLAAQVVDKGEAAVQDIIN-----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPEN 76 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~--~~~~lv~e~~~~g~~~l~~~~~-----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~N 76 (408)
.+.|++++ .+.+ ... +..++|+|++.++. |.+.+. +..++..++.|++.||+|||++|++|+||+|+|
T Consensus 55 ~l~~~~i~-~~~~~~~~~~~~~~~lv~e~~~~~~--L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~n 131 (260)
T cd06606 55 SLQHPNIV-RYYGSERDEEKNTLNIFLEYVSGGS--LSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGAN 131 (260)
T ss_pred HcCCCCEe-eEEEEEecCCCCeEEEEEEecCCCc--HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHH
Confidence 35688755 4443 333 56789999999887 776653 447888999999999999999999999999999
Q ss_pred EEEecCCCEEEeccccchhcccCcc---cccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCC
Q psy3880 77 ILLDDQMNVKLTDFGFARVLKKGEK---LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH 153 (408)
Q Consensus 77 ILl~~~~~iKl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~ 153 (408)
|+++.++.++|+|||.+........ .....++..|+|||.+... .++.++|+||+|++++++++|..||..
T Consensus 132 i~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~------~~~~~~Dv~slG~il~~l~~g~~p~~~ 205 (260)
T cd06606 132 ILVDSDGVVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGE------EYGRAADIWSLGCTVIEMATGKPPWSE 205 (260)
T ss_pred EEEcCCCCEEEcccccEEecccccccccccCCCCCccccCHhhhcCC------CCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 9999999999999999887665442 3446788999999988642 367899999999999999999999965
Q ss_pred chh-HHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHH
Q psy3880 154 RKQ-MVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRN 232 (408)
Q Consensus 154 ~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~ 232 (408)
... ......+
T Consensus 206 ~~~~~~~~~~~--------------------------------------------------------------------- 216 (260)
T cd06606 206 LGNPMAALYKI--------------------------------------------------------------------- 216 (260)
T ss_pred CCchHHHHHhc---------------------------------------------------------------------
Confidence 431 1110000
Q ss_pred HHhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q psy3880 233 IMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFF 279 (408)
Q Consensus 233 i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf 279 (408)
....... .....++.++++||.+||..||++|||+.|+++||||
T Consensus 217 -~~~~~~~--~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 260 (260)
T cd06606 217 -GSSGEPP--EIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQHPFL 260 (260)
T ss_pred -cccCCCc--CCCcccCHHHHHHHHHhCcCChhhCCCHHHHhhCCCC
Confidence 0000000 0112457899999999999999999999999999997
No 322
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=99.95 E-value=2.9e-28 Score=230.36 Aligned_cols=189 Identities=22% Similarity=0.392 Sum_probs=142.3
Q ss_pred ccccCCcEEEEeccCCcHHHHHHHHHhhchhhHHhhhC-------CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEE
Q psy3880 6 MVAHSRVVVRVKEEGDDLKHLAAQVVDKGEAAVQDIIN-------SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENIL 78 (408)
Q Consensus 6 ~~~~~~~i~~~~~~~~~~~~lv~e~~~~g~~~l~~~~~-------~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NIL 78 (408)
.+.|++++..+....++..+++||++.+|. |.+.+. +.+++..++.|++.||+|||++|++||||||+||+
T Consensus 57 ~l~h~~i~~~~~~~~~~~~~~v~e~~~~~~--L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~ 134 (260)
T cd05067 57 QLQHPRLVRLYAVVTQEPIYIITEYMENGS--LVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANIL 134 (260)
T ss_pred hcCCcCeeeEEEEEccCCcEEEEEcCCCCC--HHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEE
Confidence 467888654443444566899999999998 877753 33678889999999999999999999999999999
Q ss_pred EecCCCEEEeccccchhcccCcc--cccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHh-CCCCCCCch
Q psy3880 79 LDDQMNVKLTDFGFARVLKKGEK--LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPFWHRK 155 (408)
Q Consensus 79 l~~~~~iKl~DFGla~~~~~~~~--~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~-G~~pf~~~~ 155 (408)
+++++.++|+|||++........ .....++..|+|||++.. ..++.++|+||+||++|++++ |.+||.+.+
T Consensus 135 i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~------~~~~~~~Di~slG~~l~el~~~g~~p~~~~~ 208 (260)
T cd05067 135 VSETLCCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINY------GTFTIKSDVWSFGILLTEIVTYGRIPYPGMT 208 (260)
T ss_pred EcCCCCEEEccCcceeecCCCCcccccCCcccccccCHHHhcc------CCcCcccchHHHHHHHHHHHhCCCCCCCCCC
Confidence 99999999999999876553221 112345678999998854 346778899998888888887 888886554
Q ss_pred hHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHh
Q psy3880 156 QMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIME 235 (408)
Q Consensus 156 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~ 235 (408)
.......+..+
T Consensus 209 ~~~~~~~~~~~--------------------------------------------------------------------- 219 (260)
T cd05067 209 NPEVIQNLERG--------------------------------------------------------------------- 219 (260)
T ss_pred hHHHHHHHHcC---------------------------------------------------------------------
Confidence 43333322111
Q ss_pred cCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHc
Q psy3880 236 GKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALN 275 (408)
Q Consensus 236 ~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~ 275 (408)
+.. +.....+.++++||.+||..||++|||++++++
T Consensus 220 --~~~--~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05067 220 --YRM--PRPDNCPEELYELMRLCWKEKPEERPTFEYLRS 255 (260)
T ss_pred --CCC--CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 001 112346778999999999999999999999875
No 323
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.95 E-value=2.6e-28 Score=236.51 Aligned_cols=187 Identities=20% Similarity=0.358 Sum_probs=142.8
Q ss_pred ccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhCC---------------------HHHHHHHHHHHHHHHHHHHH
Q psy3880 8 AHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIINS---------------------NPALRYIMRQLFEALEHVHN 64 (408)
Q Consensus 8 ~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~~---------------------~~~~r~i~~qil~aL~~LH~ 64 (408)
.|++++ .+.. ..+...|+||||+.+|. |.+++.+ ..++..++.||+.||.|||+
T Consensus 79 ~h~~i~-~~~~~~~~~~~~~lv~e~~~~~~--L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~ 155 (304)
T cd05101 79 KHKNII-NLLGACTQDGPLYVIVEYASKGN--LREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLAS 155 (304)
T ss_pred cCCCch-heeEEEecCCceEEEEecCCCCc--HHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHH
Confidence 688755 5443 45567799999999998 7776642 24678899999999999999
Q ss_pred CCCeeccCCCCcEEEecCCCEEEeccccchhcccCcc---cccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHH
Q psy3880 65 HSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEK---LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIM 141 (408)
Q Consensus 65 ~~IvHRDLKp~NILl~~~~~iKl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil 141 (408)
+||+||||||+|||++.++.+||+|||+++.+..... .....+++.|+|||++.. ..++.++|+|||||++
T Consensus 156 ~givH~dlkp~Nili~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~~l 229 (304)
T cd05101 156 QKCIHRDLAARNVLVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFD------RVYTHQSDVWSFGVLM 229 (304)
T ss_pred CCeeecccccceEEEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhcc------CCCCchhhHHHHHHHH
Confidence 9999999999999999999999999999986643221 112345678999998864 3477899999999999
Q ss_pred HHHHh-CCCCCCCchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCC
Q psy3880 142 YTLLV-GCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPP 220 (408)
Q Consensus 142 ~~ll~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~P 220 (408)
|++++ |..||.+.+..+....+..+
T Consensus 230 ~el~~~g~~p~~~~~~~~~~~~~~~~------------------------------------------------------ 255 (304)
T cd05101 230 WEIFTLGGSPYPGIPVEELFKLLKEG------------------------------------------------------ 255 (304)
T ss_pred HHHHcCCCCCcccCCHHHHHHHHHcC------------------------------------------------------
Confidence 99998 77888665444333333211
Q ss_pred CCCchhHHHHHHHHhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcC
Q psy3880 221 FWHRKQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNH 276 (408)
Q Consensus 221 f~~~~~~~~~~~i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~H 276 (408)
. ... .....+.++++||.+||..+|++|||+.|+++.
T Consensus 256 ----------------~-~~~--~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~ 292 (304)
T cd05101 256 ----------------H-RMD--KPANCTNELYMMMRDCWHAIPSHRPTFKQLVED 292 (304)
T ss_pred ----------------C-cCC--CCCCCCHHHHHHHHHHcccChhhCCCHHHHHHH
Confidence 0 000 112467899999999999999999999999863
No 324
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=99.95 E-value=4.6e-28 Score=228.24 Aligned_cols=190 Identities=22% Similarity=0.331 Sum_probs=145.4
Q ss_pred ccccCCcEEEEeccCCcHHHHHHHHHhhchhhHHhhhC-------CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEE
Q psy3880 6 MVAHSRVVVRVKEEGDDLKHLAAQVVDKGEAAVQDIIN-------SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENIL 78 (408)
Q Consensus 6 ~~~~~~~i~~~~~~~~~~~~lv~e~~~~g~~~l~~~~~-------~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NIL 78 (408)
.+.|+++|..+....++..++|+||+.+|. |.+.+. +...+..++.|++.||+|||++|++||||||+||+
T Consensus 52 ~l~h~~iv~~~~~~~~~~~~~v~e~~~~~~--L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil 129 (257)
T cd05040 52 SLDHENLIRLYGVVLTHPLMMVTELAPLGS--LLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNIL 129 (257)
T ss_pred hcCCCCccceeEEEcCCeEEEEEEecCCCc--HHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEE
Confidence 478998664333333367789999999998 777653 33678889999999999999999999999999999
Q ss_pred EecCCCEEEeccccchhcccCcc----cccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHh-CCCCCCC
Q psy3880 79 LDDQMNVKLTDFGFARVLKKGEK----LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPFWH 153 (408)
Q Consensus 79 l~~~~~iKl~DFGla~~~~~~~~----~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~-G~~pf~~ 153 (408)
++.++.+||+|||++..+..... .....++..|+|||.+.. ..++.++|+||+||++|+|++ |..||..
T Consensus 130 ~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~------~~~~~~~Di~slG~~l~el~t~g~~p~~~ 203 (257)
T cd05040 130 LASDDKVKIGDFGLMRALPQNEDHYVMEEHLKVPFAWCAPESLRT------RTFSHASDVWMFGVTLWEMFTYGEEPWAG 203 (257)
T ss_pred EecCCEEEeccccccccccccccceecccCCCCCceecCHHHhcc------cCcCchhhhHHHHHHHHHHHhCCCCCCCC
Confidence 99999999999999987654221 112456788999998864 347789999999999999998 9999876
Q ss_pred chhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHH
Q psy3880 154 RKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI 233 (408)
Q Consensus 154 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i 233 (408)
.+..+....+...
T Consensus 204 ~~~~~~~~~~~~~------------------------------------------------------------------- 216 (257)
T cd05040 204 LSGSQILKKIDKE------------------------------------------------------------------- 216 (257)
T ss_pred CCHHHHHHHHHhc-------------------------------------------------------------------
Confidence 5554444333210
Q ss_pred HhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHc
Q psy3880 234 MEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALN 275 (408)
Q Consensus 234 ~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~ 275 (408)
......+ ...+.++.+|+.+||..+|++|||+.|+++
T Consensus 217 ---~~~~~~~--~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 253 (257)
T cd05040 217 ---GERLERP--EACPQDIYNVMLQCWAHNPADRPTFAALRE 253 (257)
T ss_pred ---CCcCCCC--ccCCHHHHHHHHHHCCCCcccCCCHHHHHH
Confidence 0000001 235778999999999999999999999875
No 325
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.95 E-value=8e-29 Score=237.95 Aligned_cols=198 Identities=34% Similarity=0.561 Sum_probs=145.2
Q ss_pred ccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC-----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEe
Q psy3880 8 AHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN-----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLD 80 (408)
Q Consensus 8 ~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~-----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl~ 80 (408)
.|++ |+.+.+ +.++..|+||||+.+|. |.+.+. +...++.++.|++.||.|||+.+++||||||.||+++
T Consensus 63 ~~~~-i~~~~~~~~~~~~~~lv~e~~~~~~--L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~ 139 (288)
T cd05583 63 RCPF-LVTLHYAFQTDTKLHLILDYVNGGE--LFTHLYQREHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLD 139 (288)
T ss_pred CCcc-hhhhheeeecCCEEEEEEecCCCCc--HHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEEC
Confidence 3555 445543 44456789999999998 776653 3478889999999999999999999999999999999
Q ss_pred cCCCEEEeccccchhcccCcc--cccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHH
Q psy3880 81 DQMNVKLTDFGFARVLKKGEK--LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMV 158 (408)
Q Consensus 81 ~~~~iKl~DFGla~~~~~~~~--~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~ 158 (408)
.++.++|+|||++........ ....+|++.|+|||.+.+. ...++.++|+||+|+++|+|++|..||.......
T Consensus 140 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~----~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~ 215 (288)
T cd05583 140 SEGHVVLTDFGLSKEFLAEEEERAYSFCGTIEYMAPEVIRGG----SGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQN 215 (288)
T ss_pred CCCCEEEEECccccccccccccccccccCCccccCHHHhcCC----CCCCcchhhhHHHHHHHHHHHhCCCCcccCcccc
Confidence 999999999999876543322 1235688999999987642 1235678899999999999999988874321100
Q ss_pred HHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCC
Q psy3880 159 MLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKY 238 (408)
Q Consensus 159 ~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~ 238 (408)
. ..+..+.+.....
T Consensus 216 ~------------------------------------------------------------------~~~~~~~~~~~~~ 229 (288)
T cd05583 216 S------------------------------------------------------------------QSEISRRILKSKP 229 (288)
T ss_pred h------------------------------------------------------------------HHHHHHHHHccCC
Confidence 0 0011112222211
Q ss_pred CCCCCcCCCCCccHHHHHHHhcccCCCCCCC---HHHHHcCCCCCCC
Q psy3880 239 SFSSPEWNDISEDPKDLIRKLLIVTPEDRYS---VKEALNHSFFHPK 282 (408)
Q Consensus 239 ~f~~~~~~~iS~~~~dLI~klL~~dP~~R~t---a~e~L~Hpwf~~~ 282 (408)
.. ...++.++++||.+||+.||++||| +.++|+||||+..
T Consensus 230 ~~----~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~~~~~~ 272 (288)
T cd05583 230 PF----PKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHPFFQGI 272 (288)
T ss_pred CC----CcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCcccccC
Confidence 11 1346889999999999999999998 6788999999764
No 326
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=99.95 E-value=4.8e-28 Score=235.04 Aligned_cols=187 Identities=18% Similarity=0.314 Sum_probs=142.0
Q ss_pred ccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC-------CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEE
Q psy3880 8 AHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN-------SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENIL 78 (408)
Q Consensus 8 ~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~-------~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NIL 78 (408)
.|+|+| ++.. ...+..|+||||+.+|. |.+.+. +..++..++.|++.||+|||+++|+|+||||+|||
T Consensus 97 ~h~~iv-~~~~~~~~~~~~~lv~e~~~~~~--L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil 173 (302)
T cd05055 97 NHENIV-NLLGACTIGGPILVITEYCCYGD--LLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVL 173 (302)
T ss_pred CCCCcc-eEEEEEecCCceEEEEEcCCCCc--HHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEE
Confidence 688755 5443 45567899999999998 776653 34788899999999999999999999999999999
Q ss_pred EecCCCEEEeccccchhcccCcc---cccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHh-CCCCCCCc
Q psy3880 79 LDDQMNVKLTDFGFARVLKKGEK---LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPFWHR 154 (408)
Q Consensus 79 l~~~~~iKl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~-G~~pf~~~ 154 (408)
++.++.++++|||++..+..... .....+++.|+|||.+.. ..++.++|+||+||++|+|++ |..||.+.
T Consensus 174 ~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~------~~~~~~~DiwslGvil~el~t~g~~p~~~~ 247 (302)
T cd05055 174 LTHGKIVKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFN------CVYTFESDVWSYGILLWEIFSLGSNPYPGM 247 (302)
T ss_pred EcCCCeEEECCCcccccccCCCceeecCCCCcccccCCHhhhcc------CCCCcHhHHHHHHHHHHHHHhCCCCCcCCC
Confidence 99999999999999976543221 112345678999998864 346789999999999999998 99998654
Q ss_pred hhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHH
Q psy3880 155 KQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIM 234 (408)
Q Consensus 155 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~ 234 (408)
.....+.+...
T Consensus 248 ~~~~~~~~~~~--------------------------------------------------------------------- 258 (302)
T cd05055 248 PVDSKFYKLIK--------------------------------------------------------------------- 258 (302)
T ss_pred CchHHHHHHHH---------------------------------------------------------------------
Confidence 33222111111
Q ss_pred hcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHc
Q psy3880 235 EGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALN 275 (408)
Q Consensus 235 ~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~ 275 (408)
...... ....+++++.+||.+||..||++|||+.|+++
T Consensus 259 -~~~~~~--~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~ 296 (302)
T cd05055 259 -EGYRMA--QPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQ 296 (302)
T ss_pred -cCCcCC--CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 111111 11245788999999999999999999999985
No 327
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=99.95 E-value=3.2e-28 Score=231.40 Aligned_cols=189 Identities=24% Similarity=0.340 Sum_probs=143.0
Q ss_pred ccccCCcEEEEeccCCcHHHHHHHHHhhchhhHHhhhC------CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEE
Q psy3880 6 MVAHSRVVVRVKEEGDDLKHLAAQVVDKGEAAVQDIIN------SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILL 79 (408)
Q Consensus 6 ~~~~~~~i~~~~~~~~~~~~lv~e~~~~g~~~l~~~~~------~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl 79 (408)
.+.|+|++..+....++..|+||||+.+|. |.+.+. +...+..++.|++.||+|||++|++||||||+|||+
T Consensus 63 ~~~h~~i~~~~~~~~~~~~~lv~e~~~~~~--L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili 140 (270)
T cd05056 63 QFDHPHIVKLIGVITENPVWIVMELAPLGE--LRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLV 140 (270)
T ss_pred hCCCCchhceeEEEcCCCcEEEEEcCCCCc--HHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEE
Confidence 467988664443344566789999999998 877763 347788899999999999999999999999999999
Q ss_pred ecCCCEEEeccccchhcccCcccc--cCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHh-CCCCCCCchh
Q psy3880 80 DDQMNVKLTDFGFARVLKKGEKLM--DLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPFWHRKQ 156 (408)
Q Consensus 80 ~~~~~iKl~DFGla~~~~~~~~~~--~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~-G~~pf~~~~~ 156 (408)
+.++.+||+|||++.......... ...+++.|+|||.+.. ..++.++|+|||||++|++++ |..||.+.+.
T Consensus 141 ~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~el~~~g~~pf~~~~~ 214 (270)
T cd05056 141 SSPDCVKLGDFGLSRYLEDESYYKASKGKLPIKWMAPESINF------RRFTSASDVWMFGVCMWEILMLGVKPFQGVKN 214 (270)
T ss_pred ecCCCeEEccCceeeecccccceecCCCCccccccChhhhcc------CCCCchhhhHHHHHHHHHHHHcCCCCCCCCCH
Confidence 999999999999987654432211 2234467999998753 346788999999999999885 8888866554
Q ss_pred HHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhc
Q psy3880 157 MVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEG 236 (408)
Q Consensus 157 ~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~ 236 (408)
.+....+..+
T Consensus 215 ~~~~~~~~~~---------------------------------------------------------------------- 224 (270)
T cd05056 215 NDVIGRIENG---------------------------------------------------------------------- 224 (270)
T ss_pred HHHHHHHHcC----------------------------------------------------------------------
Confidence 4333332211
Q ss_pred CCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHc
Q psy3880 237 KYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALN 275 (408)
Q Consensus 237 ~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~ 275 (408)
... +....++.+++++|.+||..||++|||+.+++.
T Consensus 225 ~~~---~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~ 260 (270)
T cd05056 225 ERL---PMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKA 260 (270)
T ss_pred CcC---CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 100 112356889999999999999999999999875
No 328
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.95 E-value=3.8e-28 Score=235.83 Aligned_cols=187 Identities=20% Similarity=0.358 Sum_probs=140.3
Q ss_pred ccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhCC---------------------HHHHHHHHHHHHHHHHHHHH
Q psy3880 8 AHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIINS---------------------NPALRYIMRQLFEALEHVHN 64 (408)
Q Consensus 8 ~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~~---------------------~~~~r~i~~qil~aL~~LH~ 64 (408)
.|++++ .+.. ..++..|+||||+.+|+ |.+++.. ..++..++.|++.||+|||+
T Consensus 82 ~h~~i~-~~~~~~~~~~~~~lv~e~~~~~~--L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~ 158 (307)
T cd05098 82 KHKNII-NLLGACTQDGPLYVIVEYASKGN--LREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLAS 158 (307)
T ss_pred CCCCEe-eEEEEEecCCceEEEEecCCCCc--HHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHH
Confidence 588754 5543 45567899999999998 8777642 35778899999999999999
Q ss_pred CCCeeccCCCCcEEEecCCCEEEeccccchhcccCccc---ccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHH
Q psy3880 65 HSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKL---MDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIM 141 (408)
Q Consensus 65 ~~IvHRDLKp~NILl~~~~~iKl~DFGla~~~~~~~~~---~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil 141 (408)
+|++||||||+|||++.++.+||+|||++......... ....+++.|+|||.+.. ..++.++|+||+||++
T Consensus 159 ~gi~H~dlkp~Nill~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~------~~~~~~~DvwslG~~l 232 (307)
T cd05098 159 KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFD------RIYTHQSDVWSFGVLL 232 (307)
T ss_pred CCcccccccHHheEEcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhcc------CCCCcHHHHHHHHHHH
Confidence 99999999999999999999999999998765432211 11234568999998864 3467889999999999
Q ss_pred HHHHh-CCCCCCCchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCC
Q psy3880 142 YTLLV-GCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPP 220 (408)
Q Consensus 142 ~~ll~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~P 220 (408)
|+|++ |..||.+.+..+....+..
T Consensus 233 ~el~~~g~~p~~~~~~~~~~~~~~~------------------------------------------------------- 257 (307)
T cd05098 233 WEIFTLGGSPYPGVPVEELFKLLKE------------------------------------------------------- 257 (307)
T ss_pred HHHHcCCCCCCCcCCHHHHHHHHHc-------------------------------------------------------
Confidence 99987 7777755443332222211
Q ss_pred CCCchhHHHHHHHHhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcC
Q psy3880 221 FWHRKQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNH 276 (408)
Q Consensus 221 f~~~~~~~~~~~i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~H 276 (408)
+. .. +....++.++++||.+||..||++|||+.|++++
T Consensus 258 ---------------~~-~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~ 295 (307)
T cd05098 258 ---------------GH-RM--DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 295 (307)
T ss_pred ---------------CC-CC--CCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence 11 01 1113468899999999999999999999999863
No 329
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=99.95 E-value=1.2e-27 Score=226.43 Aligned_cols=188 Identities=19% Similarity=0.335 Sum_probs=143.1
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC-------CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCc
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN-------SNPALRYIMRQLFEALEHVHNHSVVHRDLKPEN 76 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~-------~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~N 76 (408)
.+.|+|++ .+.. +..+..++|||++.+|. |.+.+. +..++..++.|++.||.|||++||+||||||+|
T Consensus 57 ~l~h~~i~-~~~~~~~~~~~~~lv~e~~~~~~--L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~N 133 (261)
T cd05068 57 KLRHPKLI-QLYAVCTLEEPIYIVTELMKYGS--LLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARN 133 (261)
T ss_pred HCCCCCcc-ceeEEEecCCCeeeeeecccCCc--HHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcce
Confidence 36788765 4443 45567899999999998 777753 347889999999999999999999999999999
Q ss_pred EEEecCCCEEEeccccchhcccCcccc--cCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHh-CCCCCCC
Q psy3880 77 ILLDDQMNVKLTDFGFARVLKKGEKLM--DLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPFWH 153 (408)
Q Consensus 77 ILl~~~~~iKl~DFGla~~~~~~~~~~--~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~-G~~pf~~ 153 (408)
|+++.++.+||+|||++.......... ....+..|+|||.+.. ..++.++|+||+||++|+|++ |..||.+
T Consensus 134 il~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~~l~el~t~g~~p~~~ 207 (261)
T cd05068 134 VLVGENNICKVADFGLARVIKEDIYEAREGAKFPIKWTAPEAALY------NRFSIKSDVWSFGILLTEIVTYGRMPYPG 207 (261)
T ss_pred EEEcCCCCEEECCcceEEEccCCcccccCCCcCceeccCcccccc------CCCCchhhHHHHHHHHHHHHhcCCCCCCC
Confidence 999999999999999998765322111 1222357999998864 346789999999999999998 9999876
Q ss_pred chhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHH
Q psy3880 154 RKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI 233 (408)
Q Consensus 154 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i 233 (408)
.+.......+..+
T Consensus 208 ~~~~~~~~~~~~~------------------------------------------------------------------- 220 (261)
T cd05068 208 MTNAEVLQQVDQG------------------------------------------------------------------- 220 (261)
T ss_pred CCHHHHHHHHHcC-------------------------------------------------------------------
Confidence 5544433333221
Q ss_pred HhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHc
Q psy3880 234 MEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALN 275 (408)
Q Consensus 234 ~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~ 275 (408)
+..+. -...+.+++++|.+||..||++|||+.++++
T Consensus 221 ----~~~~~--~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~ 256 (261)
T cd05068 221 ----YRMPC--PPGCPKELYDIMLDCWKEDPDDRPTFETLQW 256 (261)
T ss_pred ----CCCCC--CCcCCHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence 00000 1245788999999999999999999999864
No 330
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=99.95 E-value=6.8e-28 Score=226.13 Aligned_cols=189 Identities=19% Similarity=0.292 Sum_probs=141.0
Q ss_pred ccccCCcEEEEe-ccCCcHHHHHHHHHhhchhhHHhhhC------CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEE
Q psy3880 6 MVAHSRVVVRVK-EEGDDLKHLAAQVVDKGEAAVQDIIN------SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENIL 78 (408)
Q Consensus 6 ~~~~~~~i~~~~-~~~~~~~~lv~e~~~~g~~~l~~~~~------~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NIL 78 (408)
.+.|+|++..+. ....+..++||||+.+|. |.+.+. +...+..++.|++.||.|||++|++||||||+||+
T Consensus 48 ~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~--L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nil 125 (250)
T cd05085 48 QYDHPNIVKLIGVCTQRQPIYIVMELVPGGD--FLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCL 125 (250)
T ss_pred hCCCCCcCeEEEEEecCCccEEEEECCCCCc--HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEE
Confidence 367998663332 245567889999999998 777653 34778889999999999999999999999999999
Q ss_pred EecCCCEEEeccccchhcccCccc--ccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHh-CCCCCCCch
Q psy3880 79 LDDQMNVKLTDFGFARVLKKGEKL--MDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPFWHRK 155 (408)
Q Consensus 79 l~~~~~iKl~DFGla~~~~~~~~~--~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~-G~~pf~~~~ 155 (408)
++.++.+||+|||++.....+... ....+++.|+|||++.. ..++.++|+||+||++|++++ |..||.+..
T Consensus 126 i~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~ 199 (250)
T cd05085 126 VGENNVLKISDFGMSRQEDDGIYSSSGLKQIPIKWTAPEALNY------GRYSSESDVWSYGILLWETFSLGVCPYPGMT 199 (250)
T ss_pred EcCCCeEEECCCccceeccccccccCCCCCCcccccCHHHhcc------CCCCchhHHHHHHHHHHHHhcCCCCCCCCCC
Confidence 999999999999998754432211 11234567999999864 345678899999999999887 888886554
Q ss_pred hHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHh
Q psy3880 156 QMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIME 235 (408)
Q Consensus 156 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~ 235 (408)
.......+..
T Consensus 200 ~~~~~~~~~~---------------------------------------------------------------------- 209 (250)
T cd05085 200 NQQAREQVEK---------------------------------------------------------------------- 209 (250)
T ss_pred HHHHHHHHHc----------------------------------------------------------------------
Confidence 3332222211
Q ss_pred cCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHc
Q psy3880 236 GKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALN 275 (408)
Q Consensus 236 ~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~ 275 (408)
+ +.. .....++.++.+|+.+||..||++|||+.|+++
T Consensus 210 ~-~~~--~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 246 (250)
T cd05085 210 G-YRM--SCPQKCPDDVYKVMQRCWDYKPENRPKFSELQK 246 (250)
T ss_pred C-CCC--CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 1 000 111346789999999999999999999999875
No 331
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=99.95 E-value=7.3e-28 Score=229.24 Aligned_cols=150 Identities=21% Similarity=0.356 Sum_probs=108.1
Q ss_pred ccccCCcEEEEec-cCCcHHHHHHHHHhhchhhHHhhhCC---------HHHHHHHHHHHHHHHHHHHHCCCeeccCCCC
Q psy3880 6 MVAHSRVVVRVKE-EGDDLKHLAAQVVDKGEAAVQDIINS---------NPALRYIMRQLFEALEHVHNHSVVHRDLKPE 75 (408)
Q Consensus 6 ~~~~~~~i~~~~~-~~~~~~~lv~e~~~~g~~~l~~~~~~---------~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~ 75 (408)
.+.|+|+|..+.. ...+..|+||||+.+|. |.+++.. ...+..++.||+.||+|||+++|+||||||+
T Consensus 51 ~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~--L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~ 128 (268)
T cd05086 51 ILQHPNILQCLGQCVEAIPYLLVFEYCELGD--LKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALR 128 (268)
T ss_pred ccCCcchhheEEEecCCCccEEEEecCCCCc--HHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccc
Confidence 4689986644432 44566799999999998 8877642 1456788999999999999999999999999
Q ss_pred cEEEecCCCEEEeccccchhcccCc---ccccCCCCCcccChhhhhhcccc-CcCCCCcchhhhhhhHHHHHHHh-CCCC
Q psy3880 76 NILLDDQMNVKLTDFGFARVLKKGE---KLMDLCGTPGYLAPEVLRANMFE-DATGYGQAVDVWACGVIMYTLLV-GCPP 150 (408)
Q Consensus 76 NILl~~~~~iKl~DFGla~~~~~~~---~~~~~~gt~~y~aPE~l~~~~~~-~~~~~~~~~DiwSlGvil~~ll~-G~~p 150 (408)
|||++.++.+||+|||++....... .....++++.|+|||++...... ....++.++|+||+||++|+|++ |..|
T Consensus 129 nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p 208 (268)
T cd05086 129 NCFLTSDLTVKVGDYGIGPSRYKEDYIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQP 208 (268)
T ss_pred eEEEcCCccEEecccccccccCcchhhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCC
Confidence 9999999999999999986432211 11245788899999987532100 01234567777777777777775 4556
Q ss_pred CCCchhH
Q psy3880 151 FWHRKQM 157 (408)
Q Consensus 151 f~~~~~~ 157 (408)
|...+..
T Consensus 209 ~~~~~~~ 215 (268)
T cd05086 209 YSHLSDR 215 (268)
T ss_pred CCCCCHH
Confidence 6544433
No 332
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=99.95 E-value=9.1e-28 Score=228.32 Aligned_cols=147 Identities=22% Similarity=0.363 Sum_probs=111.0
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhCC----------HHHHHHHHHHHHHHHHHHHHCCCeeccCC
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIINS----------NPALRYIMRQLFEALEHVHNHSVVHRDLK 73 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~~----------~~~~r~i~~qil~aL~~LH~~~IvHRDLK 73 (408)
.+.|+|+| .+.. ...+..++||||+.+|. |.+++.+ ...++.++.|++.||+|||+++++|||||
T Consensus 51 ~l~h~~iv-~~~~~~~~~~~~~lv~e~~~~g~--L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlk 127 (269)
T cd05087 51 SLQHSNLL-QCLGQCTEVTPYLLVMEFCPLGD--LKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLA 127 (269)
T ss_pred hCCCCCEe-eEEEEEcCCCCcEEEEECCCCCc--HHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccC
Confidence 46799865 5443 44566789999999998 8777632 24667889999999999999999999999
Q ss_pred CCcEEEecCCCEEEeccccchhcccCcc---cccCCCCCcccChhhhhhcccc-CcCCCCcchhhhhhhHHHHHHHh-CC
Q psy3880 74 PENILLDDQMNVKLTDFGFARVLKKGEK---LMDLCGTPGYLAPEVLRANMFE-DATGYGQAVDVWACGVIMYTLLV-GC 148 (408)
Q Consensus 74 p~NILl~~~~~iKl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~l~~~~~~-~~~~~~~~~DiwSlGvil~~ll~-G~ 148 (408)
|+||+++.++.+||+|||++........ .....+++.|+|||++...... ....++.++|+||+||++|+|++ |.
T Consensus 128 p~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~ 207 (269)
T cd05087 128 LRNCLLTADLTVKIGDYGLSHNKYKEDYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGS 207 (269)
T ss_pred cceEEEcCCCcEEECCccccccccCcceeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCC
Confidence 9999999999999999999875433221 1234577889999998532100 01235678899999988888885 88
Q ss_pred CCCCCch
Q psy3880 149 PPFWHRK 155 (408)
Q Consensus 149 ~pf~~~~ 155 (408)
.||....
T Consensus 208 ~p~~~~~ 214 (269)
T cd05087 208 QPYRHLS 214 (269)
T ss_pred CCCCCCC
Confidence 8886543
No 333
>KOG1035|consensus
Probab=99.95 E-value=1.2e-27 Score=255.16 Aligned_cols=183 Identities=30% Similarity=0.530 Sum_probs=136.5
Q ss_pred cHHHHHHHHHhhchhhHHhhhCCH------HHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEecCCCEEEeccccchh
Q psy3880 22 DLKHLAAQVVDKGEAAVQDIINSN------PALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARV 95 (408)
Q Consensus 22 ~~~~lv~e~~~~g~~~l~~~~~~~------~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl~~~~~iKl~DFGla~~ 95 (408)
...||-||||+... +.+++... ..+..+++||++||.|+|++|||||||||.||+++.++.|||+|||+|..
T Consensus 669 ~~LYIQMEyCE~~l--l~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~ 746 (1351)
T KOG1035|consen 669 LILYIQMEYCEKTL--LRDIIRRNHFNSQRDEAWRLFREILEGLAYIHDQGIIHRDLKPRNIFLDSRNSVKIGDFGLATD 746 (1351)
T ss_pred eEEEEEHhhhhhhH--HHHHHHhcccchhhHHHHHHHHHHHHHHHHHHhCceeeccCCcceeEEcCCCCeeecccccchh
Confidence 34689999999876 77766432 67889999999999999999999999999999999999999999999986
Q ss_pred cc----c---------------CcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchh
Q psy3880 96 LK----K---------------GEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQ 156 (408)
Q Consensus 96 ~~----~---------------~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~ 156 (408)
.. . ....++.+||.-|+|||++.... ...|+.|+|+||||||++||+. ||...-+
T Consensus 747 ~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~---~~~Yn~KiDmYSLGIVlFEM~y---PF~TsME 820 (1351)
T KOG1035|consen 747 LKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTS---SNKYNSKIDMYSLGIVLFEMLY---PFGTSME 820 (1351)
T ss_pred hhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccc---cccccchhhhHHHHHHHHHHhc---cCCchHH
Confidence 21 0 11334578999999999987532 1358888888888888888863 3432211
Q ss_pred HHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhc
Q psy3880 157 MVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEG 236 (408)
Q Consensus 157 ~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~ 236 (408)
. ...+.++.++
T Consensus 821 R---------------------------------------------------------------------a~iL~~LR~g 831 (1351)
T KOG1035|consen 821 R---------------------------------------------------------------------ASILTNLRKG 831 (1351)
T ss_pred H---------------------------------------------------------------------HHHHHhcccC
Confidence 1 1122233333
Q ss_pred CCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCC
Q psy3880 237 KYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHP 281 (408)
Q Consensus 237 ~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~ 281 (408)
...++...|..--+..+.+|+.||..||++||||.|+|++.||.+
T Consensus 832 ~iP~~~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~s~llpp 876 (1351)
T KOG1035|consen 832 SIPEPADFFDPEHPEEASLIRWLLSHDPSKRPTATELLNSELLPP 876 (1351)
T ss_pred CCCCCcccccccchHHHHHHHHHhcCCCccCCCHHHHhhccCCCc
Confidence 333332233344456678999999999999999999999999976
No 334
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=99.95 E-value=2e-28 Score=231.94 Aligned_cols=191 Identities=26% Similarity=0.490 Sum_probs=142.4
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC---------CHHHHHHHHHHHHHHHHHHHHCCCeeccCCC
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN---------SNPALRYIMRQLFEALEHVHNHSVVHRDLKP 74 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~---------~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp 74 (408)
.+.|+|++ .+.. ..++..++++||+.||. |.+.+. ++..+..++.||+.||.|||++|++|+||||
T Consensus 58 ~~~h~~i~-~~~~~~~~~~~~~~v~e~~~~~~--L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p 134 (267)
T cd08229 58 QLNHPNVI-KYYASFIEDNELNIVLELADAGD--LSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKP 134 (267)
T ss_pred HccCCchh-hhhheeEeCCeEEEEEEecCCCC--HHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCH
Confidence 46788855 4443 34567789999999988 766542 4477889999999999999999999999999
Q ss_pred CcEEEecCCCEEEeccccchhcccCcc-cccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCC
Q psy3880 75 ENILLDDQMNVKLTDFGFARVLKKGEK-LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH 153 (408)
Q Consensus 75 ~NILl~~~~~iKl~DFGla~~~~~~~~-~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~ 153 (408)
+||+++.++.++|+|||++........ ....+|++.|+|||.+.. ..++.++|+||+|+++|+|++|..||.+
T Consensus 135 ~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~ape~~~~------~~~~~~~Dv~slG~il~~l~~g~~p~~~ 208 (267)
T cd08229 135 ANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHE------NGYNFKSDIWSLGCLLYEMAALQSPFYG 208 (267)
T ss_pred HHEEEcCCCCEEECcchhhhccccCCcccccccCCcCccCHHHhcC------CCccchhhHHHHHHHHHHHHhCCCCccc
Confidence 999999999999999999877654322 234578999999998864 3456788999999999999888888754
Q ss_pred chhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHH
Q psy3880 154 RKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI 233 (408)
Q Consensus 154 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i 233 (408)
.... .....+.+
T Consensus 209 ~~~~--------------------------------------------------------------------~~~~~~~~ 220 (267)
T cd08229 209 DKMN--------------------------------------------------------------------LYSLCKKI 220 (267)
T ss_pred ccch--------------------------------------------------------------------HHHHhhhh
Confidence 2210 00111122
Q ss_pred HhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHc
Q psy3880 234 MEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALN 275 (408)
Q Consensus 234 ~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~ 275 (408)
.... ++...+...++++++||.+||..||++|||+.++++
T Consensus 221 ~~~~--~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~ 260 (267)
T cd08229 221 EQCD--YPPLPSDHYSEELRQLVNMCINPDPEKRPDITYVYD 260 (267)
T ss_pred hcCC--CCCCCcccccHHHHHHHHHhcCCCcccCCCHHHHHH
Confidence 2211 122223457889999999999999999999997764
No 335
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=99.95 E-value=6.6e-28 Score=232.07 Aligned_cols=139 Identities=22% Similarity=0.378 Sum_probs=108.2
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhh----------------CCHHHHHHHHHHHHHHHHHHHHCCC
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDII----------------NSNPALRYIMRQLFEALEHVHNHSV 67 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~----------------~~~~~~r~i~~qil~aL~~LH~~~I 67 (408)
.+.|++++ .+.. ..++..++|+|++.+|. |.+.+ .+...+..++.|++.||+|||++||
T Consensus 75 ~l~~~~i~-~~~~~~~~~~~~~lv~e~~~~~~--L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i 151 (296)
T cd05051 75 RLSDPNIA-RLLGVCTVDPPLCMIMEYMENGD--LNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNF 151 (296)
T ss_pred hcCCCCEe-EEEEEEecCCCcEEEEecCCCCC--HHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Confidence 46788855 4443 34467899999999987 76654 2346788999999999999999999
Q ss_pred eeccCCCCcEEEecCCCEEEeccccchhcccCcc---cccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHH
Q psy3880 68 VHRDLKPENILLDDQMNVKLTDFGFARVLKKGEK---LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTL 144 (408)
Q Consensus 68 vHRDLKp~NILl~~~~~iKl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~l 144 (408)
+||||||+||+++.++.++|+|||+++....... .....+++.|+|||.+.. ..++.++|+||+||++|+|
T Consensus 152 ~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~slG~~l~el 225 (296)
T cd05051 152 VHRDLATRNCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLL------GKFTTKSDVWAFGVTLWEI 225 (296)
T ss_pred cccccchhceeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhc------CCCCccchhhhhHHHHHHH
Confidence 9999999999999999999999999876543321 123456778999998864 2467788888888888888
Q ss_pred Hh--CCCCCCC
Q psy3880 145 LV--GCPPFWH 153 (408)
Q Consensus 145 l~--G~~pf~~ 153 (408)
++ |..||..
T Consensus 226 ~~~~~~~p~~~ 236 (296)
T cd05051 226 LTLCREQPYEH 236 (296)
T ss_pred HhcCCCCCCCC
Confidence 87 5556543
No 336
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=99.95 E-value=2.8e-28 Score=230.95 Aligned_cols=192 Identities=24% Similarity=0.471 Sum_probs=142.6
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhh---------CCHHHHHHHHHHHHHHHHHHHHCCCeeccCCC
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDII---------NSNPALRYIMRQLFEALEHVHNHSVVHRDLKP 74 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~---------~~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp 74 (408)
.+.|++++ .+.+ ...+..|+|+||+.+|. |.+.+ .++..+..++.|++.||.|||++||+|+||||
T Consensus 58 ~l~h~~i~-~~~~~~~~~~~~~~v~e~~~~~~--L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~ 134 (267)
T cd08228 58 QLNHPNVI-KYLDSFIEDNELNIVLELADAGD--LSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKP 134 (267)
T ss_pred hCCCccee-eeeeeEEECCeEEEEEEecCCCc--HHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCH
Confidence 45788855 4443 34567789999999998 66554 24477889999999999999999999999999
Q ss_pred CcEEEecCCCEEEeccccchhcccCcc-cccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCC
Q psy3880 75 ENILLDDQMNVKLTDFGFARVLKKGEK-LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH 153 (408)
Q Consensus 75 ~NILl~~~~~iKl~DFGla~~~~~~~~-~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~ 153 (408)
+||+++.++.++|+|||++........ .....|++.|+|||.+.. ..++.++|+||+|+++|+|++|..||..
T Consensus 135 ~nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~------~~~~~~~Di~slG~~l~el~~g~~p~~~ 208 (267)
T cd08228 135 ANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHE------NGYNFKSDIWSLGCLLYEMAALQSPFYG 208 (267)
T ss_pred HHEEEcCCCCEEECccccceeccchhHHHhcCCCCccccChhhhcc------CCCCchhhHHHHHHHHHHHhcCCCCCcc
Confidence 999999999999999999876643322 224578899999998864 3456788999999999999988888743
Q ss_pred chhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHH
Q psy3880 154 RKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI 233 (408)
Q Consensus 154 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i 233 (408)
.... .......+
T Consensus 209 ~~~~--------------------------------------------------------------------~~~~~~~~ 220 (267)
T cd08228 209 DKMN--------------------------------------------------------------------LFSLCQKI 220 (267)
T ss_pred cccc--------------------------------------------------------------------HHHHHHHH
Confidence 2110 00111112
Q ss_pred HhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcC
Q psy3880 234 MEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNH 276 (408)
Q Consensus 234 ~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~H 276 (408)
.... ++.......+.++++||++||..||++|||+.++|+.
T Consensus 221 ~~~~--~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~ 261 (267)
T cd08228 221 EQCD--YPPLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQI 261 (267)
T ss_pred hcCC--CCCCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHH
Confidence 1111 1111123467889999999999999999999999873
No 337
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=99.95 E-value=9.1e-28 Score=230.99 Aligned_cols=188 Identities=20% Similarity=0.317 Sum_probs=141.9
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC-----------------------------CHHHHHHHHHH
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN-----------------------------SNPALRYIMRQ 54 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~-----------------------------~~~~~r~i~~q 54 (408)
.+.|+++| ++.+ ..++..++++||+.+|. |.+++. +...+..++.|
T Consensus 59 ~l~h~~iv-~~~~~~~~~~~~~lv~e~~~~~~--L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ 135 (290)
T cd05045 59 QVNHPHVI-KLYGACSQDGPLLLIVEYAKYGS--LRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQ 135 (290)
T ss_pred hCCCCCEe-eEEEEEecCCCcEEEEEecCCCC--HHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHH
Confidence 46799855 5554 45567889999999998 776653 23567899999
Q ss_pred HHHHHHHHHHCCCeeccCCCCcEEEecCCCEEEeccccchhcccCcc---cccCCCCCcccChhhhhhccccCcCCCCcc
Q psy3880 55 LFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEK---LMDLCGTPGYLAPEVLRANMFEDATGYGQA 131 (408)
Q Consensus 55 il~aL~~LH~~~IvHRDLKp~NILl~~~~~iKl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~ 131 (408)
++.||+|||+++|+||||||+|||+++++.+||+|||+++....... .....++..|+|||.+.. ..++.+
T Consensus 136 i~~~l~~LH~~~ivH~dikp~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~------~~~~~~ 209 (290)
T cd05045 136 ISRGMQYLAEMKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFD------HIYTTQ 209 (290)
T ss_pred HHHHHHHHHHCCeehhhhhhheEEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHcc------CCcchH
Confidence 99999999999999999999999999999999999999976533221 122345678999998754 346788
Q ss_pred hhhhhhhHHHHHHHh-CCCCCCCchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhh
Q psy3880 132 VDVWACGVIMYTLLV-GCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVI 210 (408)
Q Consensus 132 ~DiwSlGvil~~ll~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvi 210 (408)
+|+||+||++|+|++ |..||.+.........+.
T Consensus 210 ~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~---------------------------------------------- 243 (290)
T cd05045 210 SDVWSFGVLLWEIVTLGGNPYPGIAPERLFNLLK---------------------------------------------- 243 (290)
T ss_pred hHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHh----------------------------------------------
Confidence 999999999999998 888886544332221111
Q ss_pred HHHhhcCCCCCCCchhHHHHHHHHhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHc
Q psy3880 211 MYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALN 275 (408)
Q Consensus 211 ly~ll~g~~Pf~~~~~~~~~~~i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~ 275 (408)
..+... .....+.++.+||.+||..||++|||+.|+++
T Consensus 244 -------------------------~~~~~~--~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~ 281 (290)
T cd05045 244 -------------------------TGYRME--RPENCSEEMYNLMLTCWKQEPDKRPTFADISK 281 (290)
T ss_pred -------------------------CCCCCC--CCCCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 111111 11346789999999999999999999999875
No 338
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=99.95 E-value=6.7e-28 Score=228.69 Aligned_cols=189 Identities=20% Similarity=0.407 Sum_probs=142.1
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC------CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcE
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN------SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENI 77 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~------~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NI 77 (408)
.+.|++++ .+.. +..+..++||||+.+|. |.+++. +..++..++.|++.||+|||+++|+||||||+||
T Consensus 61 ~l~h~~i~-~~~~~~~~~~~~~iv~e~~~~~~--L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~ni 137 (266)
T cd05033 61 QFDHPNII-RLEGVVTKSRPVMIITEYMENGS--LDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNI 137 (266)
T ss_pred hCCCCCcc-eEeEEEecCCceEEEEEcCCCCC--HHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceE
Confidence 45788755 5543 44566789999999998 877763 3478889999999999999999999999999999
Q ss_pred EEecCCCEEEeccccchhcccCc-ccc--cCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHh-CCCCCCC
Q psy3880 78 LLDDQMNVKLTDFGFARVLKKGE-KLM--DLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPFWH 153 (408)
Q Consensus 78 Ll~~~~~iKl~DFGla~~~~~~~-~~~--~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~-G~~pf~~ 153 (408)
|++.++.++|+|||++..+.... ... ...+++.|+|||.+.. ..++.++|+|||||++|++++ |..||..
T Consensus 138 li~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~------~~~~~~~Dv~slG~~l~~l~~~g~~p~~~ 211 (266)
T cd05033 138 LVNSNLVCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIAY------RKFTSASDVWSFGIVMWEVMSYGERPYWD 211 (266)
T ss_pred EEcCCCCEEECccchhhcccccccceeccCCCCCccccChhhhcc------CCCccccchHHHHHHHHHHHccCCCCCCC
Confidence 99999999999999998765211 111 2334578999998864 346778888888888888886 8777755
Q ss_pred chhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHH
Q psy3880 154 RKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI 233 (408)
Q Consensus 154 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i 233 (408)
.........+..
T Consensus 212 ~~~~~~~~~~~~-------------------------------------------------------------------- 223 (266)
T cd05033 212 MSNQDVIKAVED-------------------------------------------------------------------- 223 (266)
T ss_pred CCHHHHHHHHHc--------------------------------------------------------------------
Confidence 443333322221
Q ss_pred HhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcC
Q psy3880 234 MEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNH 276 (408)
Q Consensus 234 ~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~H 276 (408)
+ +..+ .....++++.+|+.+||..||++|||+.|++++
T Consensus 224 --~-~~~~--~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~ 261 (266)
T cd05033 224 --G-YRLP--PPMDCPSALYQLMLDCWQKDRNERPTFSQIVST 261 (266)
T ss_pred --C-CCCC--CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 1 1111 112467889999999999999999999999874
No 339
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=99.95 E-value=1.2e-27 Score=226.99 Aligned_cols=188 Identities=20% Similarity=0.336 Sum_probs=141.7
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC------------CHHHHHHHHHHHHHHHHHHHHCCCeecc
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN------------SNPALRYIMRQLFEALEHVHNHSVVHRD 71 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~------------~~~~~r~i~~qil~aL~~LH~~~IvHRD 71 (408)
.+.|++++ .+.+ ..++..++||||+.+|. |.+.+. +..++..++.|++.||+|||+++++|+|
T Consensus 55 ~l~h~~i~-~~~~~~~~~~~~~~v~e~~~~~~--L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~d 131 (269)
T cd05044 55 NFNHPNIV-KLLGVCLLNEPQYIIMELMEGGD--LLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRD 131 (269)
T ss_pred hcCCCCee-eEeeeecCCCCeEEEEeccCCCc--HHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence 46799866 4443 45567899999999998 877763 2367788999999999999999999999
Q ss_pred CCCCcEEEecCC-----CEEEeccccchhcccCccc---ccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHH
Q psy3880 72 LKPENILLDDQM-----NVKLTDFGFARVLKKGEKL---MDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYT 143 (408)
Q Consensus 72 LKp~NILl~~~~-----~iKl~DFGla~~~~~~~~~---~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ 143 (408)
|||+||+++.++ .++++|||++......... ....++..|+|||.+.. ..++.++|+|||||++|+
T Consensus 132 l~p~nil~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~slG~il~e 205 (269)
T cd05044 132 LAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLD------GKFTTQSDVWSFGVLMWE 205 (269)
T ss_pred CChheEEEecCCCCCCcceEECCcccccccccccccccCcccCCCccccCHHHHcc------CCcccchhHHHHHHHHHH
Confidence 999999999877 8999999998765432211 12345678999999864 346788999999999999
Q ss_pred HHh-CCCCCCCchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCC
Q psy3880 144 LLV-GCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFW 222 (408)
Q Consensus 144 ll~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~ 222 (408)
|++ |..||...+.......+..+
T Consensus 206 llt~g~~p~~~~~~~~~~~~~~~~-------------------------------------------------------- 229 (269)
T cd05044 206 ILTLGQQPYPALNNQEVLQHVTAG-------------------------------------------------------- 229 (269)
T ss_pred HHHcCCCCCcccCHHHHHHHHhcC--------------------------------------------------------
Confidence 987 88888655443333322111
Q ss_pred CchhHHHHHHHHhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHc
Q psy3880 223 HRKQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALN 275 (408)
Q Consensus 223 ~~~~~~~~~~i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~ 275 (408)
. .+ ..+..+++++.+||.+||..||++|||++++++
T Consensus 230 --------------~-~~--~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 265 (269)
T cd05044 230 --------------G-RL--QKPENCPDKIYQLMTNCWAQDPSERPTFDRIQE 265 (269)
T ss_pred --------------C-cc--CCcccchHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 0 00 112346788999999999999999999999875
No 340
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=99.95 E-value=7.9e-28 Score=227.61 Aligned_cols=189 Identities=22% Similarity=0.396 Sum_probs=140.6
Q ss_pred ccccCCcEEEEeccCCcHHHHHHHHHhhchhhHHhhhCC-------HHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEE
Q psy3880 6 MVAHSRVVVRVKEEGDDLKHLAAQVVDKGEAAVQDIINS-------NPALRYIMRQLFEALEHVHNHSVVHRDLKPENIL 78 (408)
Q Consensus 6 ~~~~~~~i~~~~~~~~~~~~lv~e~~~~g~~~l~~~~~~-------~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NIL 78 (408)
.+.|++++.......+...+++|||+.+|. |.+++.+ ..++..++.|++.||+|||++|++||||||+||+
T Consensus 57 ~l~~~~i~~~~~~~~~~~~~~v~e~~~~~~--L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~ 134 (260)
T cd05073 57 TLQHDKLVKLHAVVTKEPIYIITEFMAKGS--LLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANIL 134 (260)
T ss_pred hcCCCCcceEEEEEcCCCeEEEEEeCCCCc--HHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEE
Confidence 467887653333333466789999999998 8777643 3677889999999999999999999999999999
Q ss_pred EecCCCEEEeccccchhcccCccc--ccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHh-CCCCCCCch
Q psy3880 79 LDDQMNVKLTDFGFARVLKKGEKL--MDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPFWHRK 155 (408)
Q Consensus 79 l~~~~~iKl~DFGla~~~~~~~~~--~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~-G~~pf~~~~ 155 (408)
++.++.+||+|||++......... ....++..|+|||++.. ..++.++|+||+||++|++++ |..||.+.+
T Consensus 135 i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~------~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~ 208 (260)
T cd05073 135 VSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINF------GSFTIKSDVWSFGILLMEIVTYGRIPYPGMS 208 (260)
T ss_pred EcCCCcEEECCCcceeeccCCCcccccCCcccccccCHhHhcc------CCcCccccchHHHHHHHHHHhcCCCCCCCCC
Confidence 999999999999998765443221 12335567999999864 345678888888888888887 788876554
Q ss_pred hHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHh
Q psy3880 156 QMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIME 235 (408)
Q Consensus 156 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~ 235 (408)
.......+.+
T Consensus 209 ~~~~~~~~~~---------------------------------------------------------------------- 218 (260)
T cd05073 209 NPEVIRALER---------------------------------------------------------------------- 218 (260)
T ss_pred HHHHHHHHhC----------------------------------------------------------------------
Confidence 4333322221
Q ss_pred cCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHc
Q psy3880 236 GKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALN 275 (408)
Q Consensus 236 ~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~ 275 (408)
+ +.. +.....+.++.+++.+||..||++|||+.++++
T Consensus 219 ~-~~~--~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05073 219 G-YRM--PRPENCPEELYNIMMRCWKNRPEERPTFEYIQS 255 (260)
T ss_pred C-CCC--CCcccCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence 1 111 112356788999999999999999999988764
No 341
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=99.95 E-value=8.7e-28 Score=230.14 Aligned_cols=139 Identities=29% Similarity=0.496 Sum_probs=112.4
Q ss_pred ccccCCcEEEEec----cCCcHHHHHHHHHhhchhhHHhhhC----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcE
Q psy3880 6 MVAHSRVVVRVKE----EGDDLKHLAAQVVDKGEAAVQDIIN----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENI 77 (408)
Q Consensus 6 ~~~~~~~i~~~~~----~~~~~~~lv~e~~~~g~~~l~~~~~----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NI 77 (408)
.+.|++++ .+.. ......++||||+.+|. |.+.+. +..++..++.|++.||+|||++||+||||||+||
T Consensus 62 ~l~h~~i~-~~~~~~~~~~~~~~~lv~e~~~~~~--l~~~~~~~~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Ni 138 (283)
T cd05080 62 TLYHENIV-KYKGCCSEQGGKGLQLIMEYVPLGS--LRDYLPKHKLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNV 138 (283)
T ss_pred hCCCCCEe-eEEEEEecCCCceEEEEecCCCCCC--HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheE
Confidence 46899866 4443 22345789999999998 777654 4588999999999999999999999999999999
Q ss_pred EEecCCCEEEeccccchhcccCccc----ccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCC
Q psy3880 78 LLDDQMNVKLTDFGFARVLKKGEKL----MDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH 153 (408)
Q Consensus 78 Ll~~~~~iKl~DFGla~~~~~~~~~----~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~ 153 (408)
|++.++.+||+|||++..+...... ....++..|+|||.+.. ..++.++|+||+||++|+|++|+.||..
T Consensus 139 li~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~------~~~~~~~Di~slG~~l~el~tg~~p~~~ 212 (283)
T cd05080 139 LLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVECLKE------NKFSYASDVWSFGVTLYELLTHCDSKQS 212 (283)
T ss_pred EEcCCCcEEEeecccccccCCcchhhccCCCCCCCceeeCHhHhcc------cCCCcccccHHHHHHHHHHHhCCCCCCC
Confidence 9999999999999999866543221 12345667999998864 3467899999999999999999999854
No 342
>PHA02882 putative serine/threonine kinase; Provisional
Probab=99.95 E-value=1e-27 Score=231.76 Aligned_cols=179 Identities=18% Similarity=0.218 Sum_probs=129.6
Q ss_pred HHHHHHHhhchhhHHhhh--CCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEecCCCEEEeccccchhcccCc--
Q psy3880 25 HLAAQVVDKGEAAVQDII--NSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGE-- 100 (408)
Q Consensus 25 ~lv~e~~~~g~~~l~~~~--~~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl~~~~~iKl~DFGla~~~~~~~-- 100 (408)
++++|++......+...+ .+++.++.++.|++.||+|||+++|+||||||+|||++.++.++|+|||+|+.+....
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~~~~~l~DFGla~~~~~~~~~ 182 (294)
T PHA02882 103 FILLEKLVENTKEIFKRIKCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGNNRGYIIDYGIASHFIIHGKH 182 (294)
T ss_pred EEEEehhccCHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCcEEEEEcCCceeeccCCcc
Confidence 456666543322244433 2457788999999999999999999999999999999999999999999998654221
Q ss_pred ------ccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHHHHHHHHhccccCCCCC
Q psy3880 101 ------KLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPE 174 (408)
Q Consensus 101 ------~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~~~~~i~~~~~~~~~~~ 174 (408)
......||+.|+|||+..+ ..|+.++|+||+||++|+|++|..||.+......+.....
T Consensus 183 ~~~~~~~~~~~~gt~~y~ape~~~~------~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~--------- 247 (294)
T PHA02882 183 IEYSKEQKDLHRGTLYYAGLDAHNG------ACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAK--------- 247 (294)
T ss_pred cccccccccccCCCccccCHHHhCC------CCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHhH---------
Confidence 1123579999999998864 4578899999999999999999999976532111111000
Q ss_pred CccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCCCCCCCcCCCCCccHHH
Q psy3880 175 WNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISEDPKD 254 (408)
Q Consensus 175 ~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~~f~~~~~~~iS~~~~d 254 (408)
......+..+...+ ...++++.+
T Consensus 248 ----------------------------------------------------~~~~~~~~~~~~~~-----~~~~~~~~~ 270 (294)
T PHA02882 248 ----------------------------------------------------CDFIKRLHEGKIKI-----KNANKFIYD 270 (294)
T ss_pred ----------------------------------------------------HHHHHHhhhhhhcc-----CCCCHHHHH
Confidence 01112222222222 234778999
Q ss_pred HHHHhcccCCCCCCCHHHHHc
Q psy3880 255 LIRKLLIVTPEDRYSVKEALN 275 (408)
Q Consensus 255 LI~klL~~dP~~R~ta~e~L~ 275 (408)
+++.|+..||++||+.+++++
T Consensus 271 ~~~~~~~~~~~~rp~~~~l~~ 291 (294)
T PHA02882 271 FIECVTKLSYEEKPDYDALIK 291 (294)
T ss_pred HHHHHHhCCCCCCCCHHHHHH
Confidence 999999999999999999875
No 343
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=99.95 E-value=1.2e-27 Score=225.43 Aligned_cols=187 Identities=19% Similarity=0.354 Sum_probs=141.5
Q ss_pred ccccCCcEEEEec-cCCcHHHHHHHHHhhchhhHHhhhC-------CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcE
Q psy3880 6 MVAHSRVVVRVKE-EGDDLKHLAAQVVDKGEAAVQDIIN-------SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENI 77 (408)
Q Consensus 6 ~~~~~~~i~~~~~-~~~~~~~lv~e~~~~g~~~l~~~~~-------~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NI 77 (408)
.+.|++++.-+.. ...+..++|||++.+|. |.+.+. +...+..++.|++.||.|||++||+||||||+||
T Consensus 56 ~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~--L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Ni 133 (256)
T cd05039 56 TLRHPNLVQLLGVVLQGNPLYIVTEYMAKGS--LVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNV 133 (256)
T ss_pred hcCCcceeeeEEEEcCCCCeEEEEEecCCCc--HHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceE
Confidence 4678886533322 44677899999999998 777652 4578899999999999999999999999999999
Q ss_pred EEecCCCEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHh-CCCCCCCchh
Q psy3880 78 LLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPFWHRKQ 156 (408)
Q Consensus 78 Ll~~~~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~-G~~pf~~~~~ 156 (408)
+++.++.+||+|||+++...... ....++..|+|||.+.. ..++.++|+||+||++|++++ |..||...+.
T Consensus 134 li~~~~~~~l~d~g~~~~~~~~~--~~~~~~~~~~ape~~~~------~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~ 205 (256)
T cd05039 134 LVSEDLVAKVSDFGLAKEASQGQ--DSGKLPVKWTAPEALRE------KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL 205 (256)
T ss_pred EEeCCCCEEEccccccccccccc--ccCCCcccccCchhhcC------CcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCH
Confidence 99999999999999998764322 23344567999998854 346778999999999999987 8888855443
Q ss_pred HHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhc
Q psy3880 157 MVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEG 236 (408)
Q Consensus 157 ~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~ 236 (408)
......+.. +
T Consensus 206 ~~~~~~~~~----------------------------------------------------------------------~ 215 (256)
T cd05039 206 KDVVPHVEK----------------------------------------------------------------------G 215 (256)
T ss_pred HHHHHHHhc----------------------------------------------------------------------C
Confidence 332222211 1
Q ss_pred CCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHc
Q psy3880 237 KYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALN 275 (408)
Q Consensus 237 ~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~ 275 (408)
+.... -...++++.+||.+||..||++|||++|+++
T Consensus 216 -~~~~~--~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 251 (256)
T cd05039 216 -YRMEA--PEGCPPEVYKVMKDCWELDPAKRPTFKQLRE 251 (256)
T ss_pred -CCCCC--ccCCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence 01111 1245788999999999999999999999985
No 344
>KOG0670|consensus
Probab=99.95 E-value=5.8e-29 Score=245.13 Aligned_cols=211 Identities=29% Similarity=0.422 Sum_probs=145.9
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEecC-CCEEEeccccchhcccCcccccCCCCCcccChhhhhhccccC
Q psy3880 46 PALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQ-MNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFED 124 (408)
Q Consensus 46 ~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl~~~-~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~ 124 (408)
..+|.|+.|++.||..|-..||+|.||||.|||+++. ..+||||||.|.....++ .+.+..+..|.|||++.+
T Consensus 536 kaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~~ene-itPYLVSRFYRaPEIiLG----- 609 (752)
T KOG0670|consen 536 KAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESKNILKLCDFGSASFASENE-ITPYLVSRFYRAPEIILG----- 609 (752)
T ss_pred hHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCcceeeeccCcccccccccc-ccHHHHHHhccCcceeec-----
Confidence 7899999999999999999999999999999999865 468999999998776554 345666789999999986
Q ss_pred cCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhccccccc-CCCccc
Q psy3880 125 ATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATG-YGQAVD 203 (408)
Q Consensus 125 ~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~-y~~~~D 203 (408)
..|+...|+||.||++|||.||+..|.+.+..+|+.-.+..+..|+..-.. .-++.+..|.+... |-..+|
T Consensus 610 -~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~KmlR-------KgqF~dqHFD~d~nf~~~e~D 681 (752)
T KOG0670|consen 610 -LPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKMLR-------KGQFKDQHFDQDLNFLYIEVD 681 (752)
T ss_pred -CcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHhh-------hcchhhhhcccccceEEEecc
Confidence 578999999999999999999999999999999998887765544321100 01111222221110 111111
Q ss_pred ccchhhhHHHhhcCCC---CCCCchhHHHHHHHHhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCC
Q psy3880 204 VWACGVIMYTLLVGCP---PFWHRKQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFH 280 (408)
Q Consensus 204 iWs~Gvily~ll~g~~---Pf~~~~~~~~~~~i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~ 280 (408)
- +++.. +...-.+..-+...+.+...++..+ ..+-..++|||.+||.+||++|+|+.|||.||||+
T Consensus 682 ~----------vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq-~~~~~~~rdLLdkml~LdP~KRit~nqAL~HpFi~ 750 (752)
T KOG0670|consen 682 K----------VTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQ-PKIVQQLRDLLDKMLILDPEKRITVNQALKHPFIT 750 (752)
T ss_pred c----------cccceeEEEecccCcchhHHHHHhccCCCCchh-HHHHHHHHHHHHHHhccChhhcCCHHHHhcCCccc
Confidence 1 11110 0000011111222333332232222 23445789999999999999999999999999997
Q ss_pred C
Q psy3880 281 P 281 (408)
Q Consensus 281 ~ 281 (408)
.
T Consensus 751 ~ 751 (752)
T KOG0670|consen 751 E 751 (752)
T ss_pred C
Confidence 4
No 345
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.95 E-value=1.1e-27 Score=235.64 Aligned_cols=187 Identities=20% Similarity=0.357 Sum_probs=140.5
Q ss_pred ccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhCC---------------------HHHHHHHHHHHHHHHHHHHH
Q psy3880 8 AHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIINS---------------------NPALRYIMRQLFEALEHVHN 64 (408)
Q Consensus 8 ~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~~---------------------~~~~r~i~~qil~aL~~LH~ 64 (408)
.|+|++ .+.. ..++..++++||+.+|. |.+++.+ ..++..++.|++.||.|||+
T Consensus 76 ~h~~iv-~~~~~~~~~~~~~lv~e~~~~g~--L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~ 152 (334)
T cd05100 76 KHKNII-NLLGACTQDGPLYVLVEYASKGN--LREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLAS 152 (334)
T ss_pred CCCCee-eeeEEEccCCceEEEEecCCCCc--HHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHH
Confidence 688755 5554 44556789999999998 8777632 25667789999999999999
Q ss_pred CCCeeccCCCCcEEEecCCCEEEeccccchhcccCccc---ccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHH
Q psy3880 65 HSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKL---MDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIM 141 (408)
Q Consensus 65 ~~IvHRDLKp~NILl~~~~~iKl~DFGla~~~~~~~~~---~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil 141 (408)
+||+||||||+|||++.++.+||+|||+++........ ....++..|+|||++.. ..++.++|+||+||++
T Consensus 153 ~givH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il 226 (334)
T cd05100 153 QKCIHRDLAARNVLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFD------RVYTHQSDVWSFGVLL 226 (334)
T ss_pred CCeeccccccceEEEcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhcc------CCcCchhhhHHHHHHH
Confidence 99999999999999999999999999999765432211 12234567999999864 3467789999999999
Q ss_pred HHHHh-CCCCCCCchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCC
Q psy3880 142 YTLLV-GCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPP 220 (408)
Q Consensus 142 ~~ll~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~P 220 (408)
|+|++ |..||.+.+.......+..+
T Consensus 227 ~el~~~g~~p~~~~~~~~~~~~~~~~------------------------------------------------------ 252 (334)
T cd05100 227 WEIFTLGGSPYPGIPVEELFKLLKEG------------------------------------------------------ 252 (334)
T ss_pred HHHHhcCCCCCCCCCHHHHHHHHHcC------------------------------------------------------
Confidence 99887 77787665444333332211
Q ss_pred CCCchhHHHHHHHHhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcC
Q psy3880 221 FWHRKQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNH 276 (408)
Q Consensus 221 f~~~~~~~~~~~i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~H 276 (408)
. .. +.....+.++.+||.+||..+|++|||+.|++++
T Consensus 253 ----------------~-~~--~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~ 289 (334)
T cd05100 253 ----------------H-RM--DKPANCTHELYMIMRECWHAVPSQRPTFKQLVED 289 (334)
T ss_pred ----------------C-CC--CCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence 0 00 0112457789999999999999999999999875
No 346
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=99.95 E-value=1.3e-27 Score=229.47 Aligned_cols=188 Identities=22% Similarity=0.376 Sum_probs=142.0
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC---------------------------CHHHHHHHHHHHH
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN---------------------------SNPALRYIMRQLF 56 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~---------------------------~~~~~r~i~~qil 56 (408)
.+.|++++ ++.. +.++..++|+||+.+|. |.+.+. +..++..++.|++
T Consensus 64 ~l~h~~iv-~~~~~~~~~~~~~lv~e~~~~~~--L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~ 140 (288)
T cd05050 64 EFDHPNIV-KLLGVCAVGKPMCLLFEYMAYGD--LNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVA 140 (288)
T ss_pred hcCCCchh-eEEEEEcCCCccEEEEecCCCCC--HHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHH
Confidence 46798765 4443 44567899999999998 776663 2356788999999
Q ss_pred HHHHHHHHCCCeeccCCCCcEEEecCCCEEEeccccchhcccCcc---cccCCCCCcccChhhhhhccccCcCCCCcchh
Q psy3880 57 EALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEK---LMDLCGTPGYLAPEVLRANMFEDATGYGQAVD 133 (408)
Q Consensus 57 ~aL~~LH~~~IvHRDLKp~NILl~~~~~iKl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~D 133 (408)
.||+|||+++++||||||+||+++.++.++|+|||++..+..... .....++..|+|||.+.+ ..++.++|
T Consensus 141 ~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~------~~~~~~~D 214 (288)
T cd05050 141 AGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFY------NRYTTESD 214 (288)
T ss_pred HHHHHHHhCCeecccccHhheEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhc------CCCCchhH
Confidence 999999999999999999999999999999999999876533221 112334667999998864 35788999
Q ss_pred hhhhhHHHHHHHh-CCCCCCCchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHH
Q psy3880 134 VWACGVIMYTLLV-GCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMY 212 (408)
Q Consensus 134 iwSlGvil~~ll~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily 212 (408)
+|||||++|+|++ |..||.+.+..+....+..
T Consensus 215 v~slG~il~el~~~~~~p~~~~~~~~~~~~~~~----------------------------------------------- 247 (288)
T cd05050 215 VWAYGVVLWEIFSYGMQPYYGMAHEEVIYYVRD----------------------------------------------- 247 (288)
T ss_pred HHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhc-----------------------------------------------
Confidence 9999999999997 8788865544333332221
Q ss_pred HhhcCCCCCCCchhHHHHHHHHhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHc
Q psy3880 213 TLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALN 275 (408)
Q Consensus 213 ~ll~g~~Pf~~~~~~~~~~~i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~ 275 (408)
+... +.+ ...+.++.+||.+||+.||++|||+.|+++
T Consensus 248 -----------------------~~~~-~~~--~~~~~~l~~li~~~l~~~p~~Rpt~~el~~ 284 (288)
T cd05050 248 -----------------------GNVL-SCP--DNCPLELYNLMRLCWSKLPSDRPSFASINR 284 (288)
T ss_pred -----------------------CCCC-CCC--CCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 1110 001 235778999999999999999999999874
No 347
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=99.95 E-value=9.1e-28 Score=226.23 Aligned_cols=187 Identities=22% Similarity=0.339 Sum_probs=140.3
Q ss_pred ccccCCcEEEEeccCCcHHHHHHHHHhhchhhHHhhhC-------CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEE
Q psy3880 6 MVAHSRVVVRVKEEGDDLKHLAAQVVDKGEAAVQDIIN-------SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENIL 78 (408)
Q Consensus 6 ~~~~~~~i~~~~~~~~~~~~lv~e~~~~g~~~l~~~~~-------~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NIL 78 (408)
.+.|++++..+.....+..++||||+.+|. |.+.+. ....+..++.|++.||.|||++|++||||||+||+
T Consensus 55 ~~~~~~i~~~~~~~~~~~~~~v~e~~~~~~--L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nil 132 (254)
T cd05083 55 KLHHKNLVRLLGVILHNGLYIVMELMSKGN--LVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNIL 132 (254)
T ss_pred hCCCCCcCeEEEEEcCCCcEEEEECCCCCC--HHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEE
Confidence 467888765544444556799999999998 777653 23677889999999999999999999999999999
Q ss_pred EecCCCEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHh-CCCCCCCchhH
Q psy3880 79 LDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPFWHRKQM 157 (408)
Q Consensus 79 l~~~~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~-G~~pf~~~~~~ 157 (408)
++.++.+||+|||++...... ......+..|+|||.+.. ..++.++|+||+||++|+|++ |..||...+..
T Consensus 133 i~~~~~~kl~Dfg~~~~~~~~--~~~~~~~~~y~~pe~~~~------~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~ 204 (254)
T cd05083 133 VSEDGVAKVSDFGLARVGSMG--VDNSKLPVKWTAPEALKH------KKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLK 204 (254)
T ss_pred EcCCCcEEECCCccceecccc--CCCCCCCceecCHHHhcc------CCcCchhhHHHHHHHHHHHHhCCCCCCccCCHH
Confidence 999999999999998754322 122334568999998854 346778899999999999887 88887654433
Q ss_pred HHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcC
Q psy3880 158 VMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 237 (408)
Q Consensus 158 ~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~ 237 (408)
+....+ ..+
T Consensus 205 ~~~~~~----------------------------------------------------------------------~~~- 213 (254)
T cd05083 205 EVKECV----------------------------------------------------------------------EKG- 213 (254)
T ss_pred HHHHHH----------------------------------------------------------------------hCC-
Confidence 222222 111
Q ss_pred CCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHc
Q psy3880 238 YSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALN 275 (408)
Q Consensus 238 ~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~ 275 (408)
+... ....+++++++||++||..||++|||+++++.
T Consensus 214 ~~~~--~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 249 (254)
T cd05083 214 YRME--PPEGCPADVYVLMTSCWETEPKKRPSFHKLRE 249 (254)
T ss_pred CCCC--CCCcCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 1111 11356888999999999999999999999875
No 348
>KOG1151|consensus
Probab=99.95 E-value=5.3e-28 Score=234.52 Aligned_cols=203 Identities=29% Similarity=0.483 Sum_probs=153.6
Q ss_pred ccccCCcEEEEec---cCCcHHHHHHHHHhhchhhH---HhhhCCHHHHHHHHHHHHHHHHHHHHC--CCeeccCCCCcE
Q psy3880 6 MVAHSRVVVRVKE---EGDDLKHLAAQVVDKGEAAV---QDIINSNPALRYIMRQLFEALEHVHNH--SVVHRDLKPENI 77 (408)
Q Consensus 6 ~~~~~~~i~~~~~---~~~~~~~lv~e~~~~g~~~l---~~~~~~~~~~r~i~~qil~aL~~LH~~--~IvHRDLKp~NI 77 (408)
-|+|+++| .+++ -+.+.+.-|+|||.|.+..+ +..+.+++++|.|+-||+.||.||... -|||-||||.||
T Consensus 523 eLDHpRIV-KlYDyfslDtdsFCTVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNI 601 (775)
T KOG1151|consen 523 ELDHPRIV-KLYDYFSLDTDSFCTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNI 601 (775)
T ss_pred ccCcceee-eeeeeeeeccccceeeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccE
Confidence 48999965 5554 45677889999999998322 234568899999999999999999976 499999999999
Q ss_pred EEec---CCCEEEeccccchhcccCcc-------c-ccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHh
Q psy3880 78 LLDD---QMNVKLTDFGFARVLKKGEK-------L-MDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV 146 (408)
Q Consensus 78 Ll~~---~~~iKl~DFGla~~~~~~~~-------~-~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~ 146 (408)
|+.+ .|.|||+|||+++++..... + ....||.+|++||.+.... +.+.
T Consensus 602 LLv~GtacGeIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgk--ePPK------------------- 660 (775)
T KOG1151|consen 602 LLVNGTACGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGK--EPPK------------------- 660 (775)
T ss_pred EEecCcccceeEeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCC--CCCc-------------------
Confidence 9964 47899999999999875332 2 2367999999999875321 0111
Q ss_pred CCCCCCCchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCc-h
Q psy3880 147 GCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHR-K 225 (408)
Q Consensus 147 G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~-~ 225 (408)
.+.++|+||+|||+|..+.|+-||-+. +
T Consensus 661 ---------------------------------------------------IsnKVDVWSvGVIFyQClYGrKPFGhnqs 689 (775)
T KOG1151|consen 661 ---------------------------------------------------ISNKVDVWSVGVIFYQCLYGRKPFGHNQS 689 (775)
T ss_pred ---------------------------------------------------cccceeeEeeehhhhhhhccCCCCCCchh
Confidence 234778888888888888888888654 2
Q ss_pred hHHHHH--HHHh-cCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCCC
Q psy3880 226 QMVMLR--NIME-GKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKL 283 (408)
Q Consensus 226 ~~~~~~--~i~~-~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~~ 283 (408)
+..++. .|++ ....|+. -+.+|++|++||++||.+--++|+.+.++-.||||.+..
T Consensus 690 QQdILqeNTIlkAtEVqFP~--KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~dpyllPh~ 748 (775)
T KOG1151|consen 690 QQDILQENTILKATEVQFPP--KPVVSSEAKAFIRRCLAYRKEDRIDVQQLACDPYLLPHI 748 (775)
T ss_pred HHHHHhhhchhcceeccCCC--CCccCHHHHHHHHHHHHhhhhhhhhHHHHccCccccchh
Confidence 333332 2333 3345543 357999999999999999999999999999999998753
No 349
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=99.95 E-value=1.9e-27 Score=229.49 Aligned_cols=195 Identities=21% Similarity=0.316 Sum_probs=142.2
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC-----------------CHHHHHHHHHHHHHHHHHHHHCC
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN-----------------SNPALRYIMRQLFEALEHVHNHS 66 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~-----------------~~~~~r~i~~qil~aL~~LH~~~ 66 (408)
.+.|++++ .+.+ ..++..++||||+.+|. |.+.+. +...+..++.|++.||+|||++|
T Consensus 73 ~l~h~~i~-~~~~~~~~~~~~~lv~e~~~~~~--L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ 149 (295)
T cd05097 73 RLKNPNII-RLLGVCVSDDPLCMITEYMENGD--LNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLN 149 (295)
T ss_pred hCCCCCcC-eEEEEEcCCCccEEEEecCCCCc--HHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcC
Confidence 46798855 4443 45667899999999998 777652 23567789999999999999999
Q ss_pred CeeccCCCCcEEEecCCCEEEeccccchhcccCccc---ccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHH
Q psy3880 67 VVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKL---MDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYT 143 (408)
Q Consensus 67 IvHRDLKp~NILl~~~~~iKl~DFGla~~~~~~~~~---~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ 143 (408)
++||||||+||+++.++.+||+|||++..+...... ....+++.|+|||++.. ..++.++|+|||||++|+
T Consensus 150 i~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~------~~~~~~~DvwSlG~~l~e 223 (295)
T cd05097 150 FVHRDLATRNCLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILL------GKFTTASDVWAFGVTLWE 223 (295)
T ss_pred eeccccChhhEEEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhcc------CCcCchhhHHHHHHHHHH
Confidence 999999999999999999999999998765433211 12345678999998864 346789999999999999
Q ss_pred HHh--CCCCCCCchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCC
Q psy3880 144 LLV--GCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 221 (408)
Q Consensus 144 ll~--G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf 221 (408)
|++ |..||...+....+..+..-.
T Consensus 224 l~~~~~~~p~~~~~~~~~~~~~~~~~------------------------------------------------------ 249 (295)
T cd05097 224 MFTLCKEQPYSLLSDEQVIENTGEFF------------------------------------------------------ 249 (295)
T ss_pred HHHcCCCCCCcccChHHHHHHHHHhh------------------------------------------------------
Confidence 987 566776554444333321100
Q ss_pred CCchhHHHHHHHHhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHc
Q psy3880 222 WHRKQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALN 275 (408)
Q Consensus 222 ~~~~~~~~~~~i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~ 275 (408)
... +...+. ......++.+++||.+||..||++|||++++++
T Consensus 250 ---------~~~--~~~~~~-~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~ 291 (295)
T cd05097 250 ---------RNQ--GRQIYL-SQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHH 291 (295)
T ss_pred ---------hhc--cccccC-CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 000 000000 112246788999999999999999999999875
No 350
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=99.95 E-value=1.4e-27 Score=224.05 Aligned_cols=188 Identities=22% Similarity=0.330 Sum_probs=140.1
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC------CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcE
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN------SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENI 77 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~------~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NI 77 (408)
.+.|++++ .+.+ ...+..++|+||+.|+. |.+.+. +...+..++.|++.||+|||+++++||||||+||
T Consensus 48 ~l~~~~i~-~~~~~~~~~~~~~~v~e~~~~~~--l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~ni 124 (251)
T cd05041 48 QYDHPNIV-KLIGVCVQKQPIYIVMELVPGGS--LLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNC 124 (251)
T ss_pred hCCCCCeE-EEEEEEecCCCeEEEEEcCCCCc--HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceE
Confidence 46798855 4433 45567799999999998 777662 3367788999999999999999999999999999
Q ss_pred EEecCCCEEEeccccchhcccCcccc---cCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHh-CCCCCCC
Q psy3880 78 LLDDQMNVKLTDFGFARVLKKGEKLM---DLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPFWH 153 (408)
Q Consensus 78 Ll~~~~~iKl~DFGla~~~~~~~~~~---~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~-G~~pf~~ 153 (408)
|++.++.+||+|||++.......... ...++..|+|||.+.. ..++.++|+||+||++|+|++ |..||.+
T Consensus 125 li~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~------~~~~~~~Di~slG~i~~~l~t~~~~p~~~ 198 (251)
T cd05041 125 LVGENNVLKISDFGMSREEEGGIYTVSDGLKQIPIKWTAPEALNY------GRYTSESDVWSYGILLWETFSLGDTPYPG 198 (251)
T ss_pred EEcCCCcEEEeeccccccccCCcceeccccCcceeccCChHhhcc------CCCCcchhHHHHHHHHHHHHhccCCCCcc
Confidence 99999999999999987654222111 1233557999998864 346788999999999999998 7777755
Q ss_pred chhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHH
Q psy3880 154 RKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI 233 (408)
Q Consensus 154 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i 233 (408)
.........+..
T Consensus 199 ~~~~~~~~~~~~-------------------------------------------------------------------- 210 (251)
T cd05041 199 MSNQQTRERIES-------------------------------------------------------------------- 210 (251)
T ss_pred CCHHHHHHHHhc--------------------------------------------------------------------
Confidence 443222222111
Q ss_pred HhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHc
Q psy3880 234 MEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALN 275 (408)
Q Consensus 234 ~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~ 275 (408)
. ... +.....+.++.++|.+||+.||++|||++|+|+
T Consensus 211 --~-~~~--~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~ 247 (251)
T cd05041 211 --G-YRM--PAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYN 247 (251)
T ss_pred --C-CCC--CCCccCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence 0 011 112346788999999999999999999999986
No 351
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=99.95 E-value=1.7e-27 Score=223.48 Aligned_cols=187 Identities=22% Similarity=0.388 Sum_probs=137.0
Q ss_pred cccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhh-------CCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcE
Q psy3880 7 VAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDII-------NSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENI 77 (408)
Q Consensus 7 ~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~-------~~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NI 77 (408)
+.|++++ .+.+ ..++..+++||++.+|. |.+.+ .++..+..++.|++.||+|||++|++||||||+||
T Consensus 58 l~~~~i~-~~~~~~~~~~~~~~i~e~~~~~~--l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~ni 134 (258)
T smart00219 58 LDHPNIV-KLLGVCTEEEPLMIVMEYMEGGD--LLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNC 134 (258)
T ss_pred cCCCchh-eEEEEEcCCCeeEEEEeccCCCC--HHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceE
Confidence 5788754 5553 34467899999999987 76655 34577899999999999999999999999999999
Q ss_pred EEecCCCEEEeccccchhcccCcccc--cCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHh-CCCCCCCc
Q psy3880 78 LLDDQMNVKLTDFGFARVLKKGEKLM--DLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPFWHR 154 (408)
Q Consensus 78 Ll~~~~~iKl~DFGla~~~~~~~~~~--~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~-G~~pf~~~ 154 (408)
++++++.++|+|||++.......... ...+++.|+|||.+.. ..++.++|+||+||++++|++ |.+||..
T Consensus 135 l~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~------~~~~~~~Di~slG~i~~~l~~~g~~p~~~- 207 (258)
T smart00219 135 LVGENLVVKISDFGLSRDLYDDDYYKKKGGKLPIRWMAPESLKD------GKFTSKSDVWSFGVLLWEIFTLGESPYPG- 207 (258)
T ss_pred EEccCCeEEEcccCCceecccccccccccCCCcccccChHHhcc------CCCCcchhHHHHHHHHHHHHhCCCCCCCC-
Confidence 99999999999999997665432211 1236678999998743 335566777777777777766 5555533
Q ss_pred hhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHH
Q psy3880 155 KQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIM 234 (408)
Q Consensus 155 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~ 234 (408)
.+.......+.
T Consensus 208 ---------------------------------------------------------------------~~~~~~~~~~~ 218 (258)
T smart00219 208 ---------------------------------------------------------------------MSNEEVLEYLK 218 (258)
T ss_pred ---------------------------------------------------------------------CCHHHHHHHHh
Confidence 22233333333
Q ss_pred hcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHc
Q psy3880 235 EGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALN 275 (408)
Q Consensus 235 ~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~ 275 (408)
.+.... .+ ...+.++.+++.+||..||++|||+.|+++
T Consensus 219 ~~~~~~-~~--~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 256 (258)
T smart00219 219 KGYRLP-KP--ENCPPEIYKLMLQCWAEDPEDRPTFSELVE 256 (258)
T ss_pred cCCCCC-CC--CcCCHHHHHHHHHHCcCChhhCcCHHHHHh
Confidence 332211 11 237889999999999999999999999986
No 352
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=99.95 E-value=1.2e-27 Score=227.19 Aligned_cols=188 Identities=21% Similarity=0.427 Sum_probs=141.6
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC------CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcE
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN------SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENI 77 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~------~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NI 77 (408)
.+.|+|++ .+.. +.++..++||||+.||. |.+++. +..++..++.|++.||+|||++|++||||||+||
T Consensus 61 ~l~h~~i~-~~~~~~~~~~~~~lv~e~~~~~~--L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~ni 137 (267)
T cd05066 61 QFDHPNII-HLEGVVTKSKPVMIVTEYMENGS--LDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNI 137 (267)
T ss_pred hCCCCCcc-eEEEEEecCCccEEEEEcCCCCC--HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcE
Confidence 36798855 5543 45567899999999998 777763 3467889999999999999999999999999999
Q ss_pred EEecCCCEEEeccccchhcccCcc-cc---cCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHh-CCCCCC
Q psy3880 78 LLDDQMNVKLTDFGFARVLKKGEK-LM---DLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPFW 152 (408)
Q Consensus 78 Ll~~~~~iKl~DFGla~~~~~~~~-~~---~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~-G~~pf~ 152 (408)
|++.++.++++|||++..+..... .. ...++..|+|||.+.. ..++.++|+||+||++|++++ |..||.
T Consensus 138 li~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~------~~~~~~~Dv~slG~~l~ell~~g~~p~~ 211 (267)
T cd05066 138 LVNSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAY------RKFTSASDVWSYGIVMWEVMSYGERPYW 211 (267)
T ss_pred EECCCCeEEeCCCCcccccccccceeeecCCCccceeecCHhHhcc------CccCchhhhHHHHHHHHHHhcCCCCCcc
Confidence 999999999999999987653321 11 1223467999999864 346778899999999998775 888886
Q ss_pred CchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHH
Q psy3880 153 HRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRN 232 (408)
Q Consensus 153 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~ 232 (408)
..+..+....+.+
T Consensus 212 ~~~~~~~~~~~~~------------------------------------------------------------------- 224 (267)
T cd05066 212 EMSNQDVIKAIEE------------------------------------------------------------------- 224 (267)
T ss_pred cCCHHHHHHHHhC-------------------------------------------------------------------
Confidence 5544333333221
Q ss_pred HHhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHc
Q psy3880 233 IMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALN 275 (408)
Q Consensus 233 i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~ 275 (408)
+ +.+ +....+++++++++.+||+.||.+|||+.++++
T Consensus 225 ---~-~~~--~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 261 (267)
T cd05066 225 ---G-YRL--PAPMDCPAALHQLMLDCWQKDRNERPKFEQIVS 261 (267)
T ss_pred ---C-CcC--CCCCCCCHHHHHHHHHHcccCchhCCCHHHHHH
Confidence 1 111 111246788999999999999999999999875
No 353
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=99.95 E-value=1.6e-27 Score=226.09 Aligned_cols=188 Identities=21% Similarity=0.396 Sum_probs=140.4
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC------CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcE
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN------SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENI 77 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~------~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NI 77 (408)
.+.|++++ .+.. ...+..|+||||+.+|. |.+.+. +..++..++.|++.||+|||++|++||||||+||
T Consensus 62 ~l~h~~i~-~~~~~~~~~~~~~lv~e~~~~~~--L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Ni 138 (268)
T cd05063 62 QFSHHNII-RLEGVVTKFKPAMIITEYMENGA--LDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNI 138 (268)
T ss_pred cCCCCCee-EEEEEEccCCCcEEEEEcCCCCC--HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhE
Confidence 46788755 5544 44567799999999998 766653 3467888999999999999999999999999999
Q ss_pred EEecCCCEEEeccccchhcccCccc--cc--CCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHh-CCCCCC
Q psy3880 78 LLDDQMNVKLTDFGFARVLKKGEKL--MD--LCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPFW 152 (408)
Q Consensus 78 Ll~~~~~iKl~DFGla~~~~~~~~~--~~--~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~-G~~pf~ 152 (408)
+++.++.+||+|||++......... .. ...++.|+|||++.. ..++.++|+||+||++|++++ |..||.
T Consensus 139 li~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~------~~~~~~~Dv~slG~il~ell~~g~~p~~ 212 (268)
T cd05063 139 LVNSNLECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAY------RKFTSASDVWSFGIVMWEVMSFGERPYW 212 (268)
T ss_pred EEcCCCcEEECCCccceecccccccceeccCCCcCceecCHHHhhc------CCcChHhHHHHHHHHHHHHHhCCCCCCC
Confidence 9999999999999998765432211 11 123457999998864 346778899999999998886 888886
Q ss_pred CchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHH
Q psy3880 153 HRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRN 232 (408)
Q Consensus 153 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~ 232 (408)
..+.......+..
T Consensus 213 ~~~~~~~~~~i~~------------------------------------------------------------------- 225 (268)
T cd05063 213 DMSNHEVMKAIND------------------------------------------------------------------- 225 (268)
T ss_pred cCCHHHHHHHHhc-------------------------------------------------------------------
Confidence 5544333333321
Q ss_pred HHhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHc
Q psy3880 233 IMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALN 275 (408)
Q Consensus 233 i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~ 275 (408)
+. ..+...+.+.++.+||.+||..||++||++.++++
T Consensus 226 ---~~---~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~ 262 (268)
T cd05063 226 ---GF---RLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVN 262 (268)
T ss_pred ---CC---CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 10 00111246778999999999999999999999975
No 354
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=99.95 E-value=1.7e-27 Score=224.17 Aligned_cols=190 Identities=24% Similarity=0.382 Sum_probs=144.0
Q ss_pred ccccCCcEEEEec-cCCcHHHHHHHHHhhchhhHHhhhC------CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEE
Q psy3880 6 MVAHSRVVVRVKE-EGDDLKHLAAQVVDKGEAAVQDIIN------SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENIL 78 (408)
Q Consensus 6 ~~~~~~~i~~~~~-~~~~~~~lv~e~~~~g~~~l~~~~~------~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NIL 78 (408)
.+.|++++..+.. +.....++|+||+.+|. |.+++. +.+.+..++.|++.||+|||+++++||||||+||+
T Consensus 55 ~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~--L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~ 132 (256)
T cd05112 55 KLSHPKLVQLYGVCTERSPICLVFEFMEHGC--LSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCL 132 (256)
T ss_pred hCCCCCeeeEEEEEccCCceEEEEEcCCCCc--HHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEE
Confidence 4678885533332 44566789999999998 777663 34678899999999999999999999999999999
Q ss_pred EecCCCEEEeccccchhcccCcc--cccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHh-CCCCCCCch
Q psy3880 79 LDDQMNVKLTDFGFARVLKKGEK--LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPFWHRK 155 (408)
Q Consensus 79 l~~~~~iKl~DFGla~~~~~~~~--~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~-G~~pf~~~~ 155 (408)
++.++.+||+|||++........ .....++..|+|||.+.. ..++.++|+||+||++|+|++ |..||....
T Consensus 133 i~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~------~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~ 206 (256)
T cd05112 133 VGENQVVKVSDFGMTRFVLDDQYTSSTGTKFPVKWSSPEVFSF------SKYSSKSDVWSFGVLMWEVFSEGKTPYENRS 206 (256)
T ss_pred EcCCCeEEECCCcceeecccCcccccCCCccchhhcCHhHhcc------CCcChHHHHHHHHHHHHHHHcCCCCCCCcCC
Confidence 99999999999999875533211 112334568999998864 346789999999999999998 899987655
Q ss_pred hHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHh
Q psy3880 156 QMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIME 235 (408)
Q Consensus 156 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~ 235 (408)
....+..+..+.
T Consensus 207 ~~~~~~~~~~~~-------------------------------------------------------------------- 218 (256)
T cd05112 207 NSEVVETINAGF-------------------------------------------------------------------- 218 (256)
T ss_pred HHHHHHHHhCCC--------------------------------------------------------------------
Confidence 444443332210
Q ss_pred cCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcC
Q psy3880 236 GKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNH 276 (408)
Q Consensus 236 ~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~H 276 (408)
..+. + ...+.++.+|+.+||..||++|||++|++++
T Consensus 219 --~~~~-~--~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~ 254 (256)
T cd05112 219 --RLYK-P--RLASQSVYELMQHCWKERPEDRPSFSLLLHQ 254 (256)
T ss_pred --CCCC-C--CCCCHHHHHHHHHHcccChhhCCCHHHHHHh
Confidence 0000 0 1247789999999999999999999999874
No 355
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=99.95 E-value=1.2e-27 Score=241.80 Aligned_cols=103 Identities=27% Similarity=0.450 Sum_probs=85.8
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEecCCCEEEeccccchhcccCcc---cccCCCCCcccChhhhhhccc
Q psy3880 46 PALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEK---LMDLCGTPGYLAPEVLRANMF 122 (408)
Q Consensus 46 ~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl~~~~~iKl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~l~~~~~ 122 (408)
.++..++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++....... .....+++.|+|||.+..
T Consensus 237 ~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--- 313 (400)
T cd05105 237 LDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFD--- 313 (400)
T ss_pred HHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEEeCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcC---
Confidence 44577999999999999999999999999999999999999999999976543221 122456788999998864
Q ss_pred cCcCCCCcchhhhhhhHHHHHHHh-CCCCCCCc
Q psy3880 123 EDATGYGQAVDVWACGVIMYTLLV-GCPPFWHR 154 (408)
Q Consensus 123 ~~~~~~~~~~DiwSlGvil~~ll~-G~~pf~~~ 154 (408)
..++.++|||||||++|+|++ |..||.+.
T Consensus 314 ---~~~~~~~DiwSlGvil~ellt~g~~P~~~~ 343 (400)
T cd05105 314 ---NLYTTLSDVWSYGILLWEIFSLGGTPYPGM 343 (400)
T ss_pred ---CCCCchhhHHHHHHHHHHHHHCCCCCCccc
Confidence 346789999999999999997 88888653
No 356
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=99.95 E-value=2.9e-27 Score=229.37 Aligned_cols=142 Identities=25% Similarity=0.374 Sum_probs=112.1
Q ss_pred ccccCCcEEEEeccCCcHHHHHHHHHhhchhhHHhhhCC------HHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEE
Q psy3880 6 MVAHSRVVVRVKEEGDDLKHLAAQVVDKGEAAVQDIINS------NPALRYIMRQLFEALEHVHNHSVVHRDLKPENILL 79 (408)
Q Consensus 6 ~~~~~~~i~~~~~~~~~~~~lv~e~~~~g~~~l~~~~~~------~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl 79 (408)
.+.|+|++..+........++++||+.+|. |.+.+.+ .+.+..++.|++.||.|||++||+||||||+|||+
T Consensus 65 ~l~h~niv~~~~~~~~~~~~~v~e~~~~g~--l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill 142 (303)
T cd05110 65 SMDHPHLVRLLGVCLSPTIQLVTQLMPHGC--LLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLV 142 (303)
T ss_pred hCCCCCcccEEEEEcCCCceeeehhcCCCC--HHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeee
Confidence 367988664443333445679999999998 8777643 36788999999999999999999999999999999
Q ss_pred ecCCCEEEeccccchhcccCccc---ccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHh-CCCCCCCch
Q psy3880 80 DDQMNVKLTDFGFARVLKKGEKL---MDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPFWHRK 155 (408)
Q Consensus 80 ~~~~~iKl~DFGla~~~~~~~~~---~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~-G~~pf~~~~ 155 (408)
+.++.+||+|||+++.+...... ....++..|+|||.+.. ..++.++|+||+||++|++++ |..||.+..
T Consensus 143 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~------~~~~~~~DiwslG~~l~el~t~g~~p~~~~~ 216 (303)
T cd05110 143 KSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHY------RKFTHQSDVWSYGVTIWELMTFGGKPYDGIP 216 (303)
T ss_pred cCCCceEEccccccccccCcccccccCCCccccccCCHHHhcc------CCCChHHHHHHHHHHHHHHHhCCCCCCCCCC
Confidence 99999999999999866433221 12345678999998854 346788999999999999987 888886543
No 357
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=99.95 E-value=1.7e-27 Score=225.23 Aligned_cols=140 Identities=28% Similarity=0.575 Sum_probs=113.4
Q ss_pred ccccCCcEEEEec-cCCcHHHHHHHHHhhchhhHHhhhC---------CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCC
Q psy3880 6 MVAHSRVVVRVKE-EGDDLKHLAAQVVDKGEAAVQDIIN---------SNPALRYIMRQLFEALEHVHNHSVVHRDLKPE 75 (408)
Q Consensus 6 ~~~~~~~i~~~~~-~~~~~~~lv~e~~~~g~~~l~~~~~---------~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~ 75 (408)
.+.|++++..+.. ..++..++||||+.+|. |.+.+. +..++..++.|++.||.|||++||+||||||+
T Consensus 58 ~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~--L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ 135 (267)
T cd08224 58 QLDHPNVIKYLASFIENNELNIVLELADAGD--LSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPA 135 (267)
T ss_pred hCCCCCeeeeeeeeecCCeEEEEEecCCCCC--HHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChh
Confidence 3578875533322 44566799999999998 766552 44788999999999999999999999999999
Q ss_pred cEEEecCCCEEEeccccchhcccCc-ccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCC
Q psy3880 76 NILLDDQMNVKLTDFGFARVLKKGE-KLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH 153 (408)
Q Consensus 76 NILl~~~~~iKl~DFGla~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~ 153 (408)
||+++.++.++|+|||++..+.... ......+++.|+|||.+.. ..++.++|+||+||++|+|++|..||..
T Consensus 136 nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~------~~~~~~~Di~slG~il~~l~~g~~p~~~ 208 (267)
T cd08224 136 NVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHE------NGYNFKSDIWSLGCLLYEMAALQSPFYG 208 (267)
T ss_pred hEEECCCCcEEEeccceeeeccCCCcccceecCCccccCHHHhcc------CCCCchhcHHHHHHHHHHHHHCCCCccc
Confidence 9999999999999999987654332 2234578899999998864 3467899999999999999999999854
No 358
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=99.95 E-value=1.9e-27 Score=228.13 Aligned_cols=138 Identities=25% Similarity=0.439 Sum_probs=110.8
Q ss_pred ccccCCcEEEEec----cCCcHHHHHHHHHhhchhhHHhhhC------CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCC
Q psy3880 6 MVAHSRVVVRVKE----EGDDLKHLAAQVVDKGEAAVQDIIN------SNPALRYIMRQLFEALEHVHNHSVVHRDLKPE 75 (408)
Q Consensus 6 ~~~~~~~i~~~~~----~~~~~~~lv~e~~~~g~~~l~~~~~------~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~ 75 (408)
.+.|+|++ .+.. .+....++||||+.||. |.+++. +..++..++.|++.||+|||++||+||||||+
T Consensus 62 ~l~h~~i~-~~~~~~~~~~~~~~~lv~e~~~g~~--L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~ 138 (284)
T cd05079 62 NLYHENIV-KYKGICTEDGGNGIKLIMEFLPSGS--LKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAAR 138 (284)
T ss_pred hCCCCCee-eeeeEEecCCCCceEEEEEccCCCC--HHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchh
Confidence 46798865 4432 22356789999999998 777653 34778899999999999999999999999999
Q ss_pred cEEEecCCCEEEeccccchhcccCcc----cccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCC
Q psy3880 76 NILLDDQMNVKLTDFGFARVLKKGEK----LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151 (408)
Q Consensus 76 NILl~~~~~iKl~DFGla~~~~~~~~----~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf 151 (408)
||+++.++.++|+|||++..+..... .....++..|+|||++.. ..++.++|+||+||++|+|++++.|+
T Consensus 139 Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~------~~~~~~~Di~slG~il~ellt~~~~~ 212 (284)
T cd05079 139 NVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQ------SKFYIASDVWSFGVTLYELLTYCDSE 212 (284)
T ss_pred eEEEcCCCCEEECCCccccccccCccceeecCCCCCCccccCHHHhcc------CCCCccccchhhhhhhhhhhcCCCCC
Confidence 99999999999999999987654322 123456778999998864 34678999999999999999987765
Q ss_pred C
Q psy3880 152 W 152 (408)
Q Consensus 152 ~ 152 (408)
.
T Consensus 213 ~ 213 (284)
T cd05079 213 S 213 (284)
T ss_pred c
Confidence 3
No 359
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=99.95 E-value=1.8e-27 Score=224.68 Aligned_cols=188 Identities=22% Similarity=0.394 Sum_probs=142.4
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC-------CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCc
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN-------SNPALRYIMRQLFEALEHVHNHSVVHRDLKPEN 76 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~-------~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~N 76 (408)
.+.|++++ .+.. +.+...++|||++.+|. |.+.+. +.+++..++.|++.||.|||++||+|+||||+|
T Consensus 57 ~l~h~~i~-~~~~~~~~~~~~~~v~e~~~~~~--L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~n 133 (261)
T cd05034 57 KLRHDKLV-QLYAVCSEEEPIYIVTEYMSKGS--LLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARN 133 (261)
T ss_pred hCCCCCEe-eeeeeeecCCceEEEEeccCCCC--HHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchhe
Confidence 46788855 5543 34467899999999998 777763 347889999999999999999999999999999
Q ss_pred EEEecCCCEEEeccccchhcccCccc--ccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHh-CCCCCCC
Q psy3880 77 ILLDDQMNVKLTDFGFARVLKKGEKL--MDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPFWH 153 (408)
Q Consensus 77 ILl~~~~~iKl~DFGla~~~~~~~~~--~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~-G~~pf~~ 153 (408)
|++++++.+||+|||++..+...... ....++..|+|||.+.+ ..++.++|+||+||++|++++ |..||.+
T Consensus 134 ili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~------~~~~~~~Di~slG~il~~l~t~g~~p~~~ 207 (261)
T cd05034 134 ILVGENLVCKIADFGLARLIEDDEYTAREGAKFPIKWTAPEAANY------GRFTIKSDVWSFGILLTEIVTYGRVPYPG 207 (261)
T ss_pred EEEcCCCCEEECccccceeccchhhhhhhccCCCccccCHHHhcc------CCcCchhHHHHHHHHHHHHHhCCCCCCCC
Confidence 99999999999999998766432211 12234568999998864 346778999999999999998 8888866
Q ss_pred chhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHH
Q psy3880 154 RKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI 233 (408)
Q Consensus 154 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i 233 (408)
.+....+.++..+
T Consensus 208 ~~~~~~~~~~~~~------------------------------------------------------------------- 220 (261)
T cd05034 208 MTNREVLEQVERG------------------------------------------------------------------- 220 (261)
T ss_pred CCHHHHHHHHHcC-------------------------------------------------------------------
Confidence 5544443333221
Q ss_pred HhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHc
Q psy3880 234 MEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALN 275 (408)
Q Consensus 234 ~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~ 275 (408)
+. .+.....+.++.+++.+||..||++|||++++++
T Consensus 221 ----~~--~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~ 256 (261)
T cd05034 221 ----YR--MPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQS 256 (261)
T ss_pred ----CC--CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 00 0111234778999999999999999999998864
No 360
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=99.95 E-value=1.5e-27 Score=228.33 Aligned_cols=138 Identities=21% Similarity=0.292 Sum_probs=108.4
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC------CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcE
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN------SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENI 77 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~------~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NI 77 (408)
.+.|+|++ ++.. ..++..++||||+.+|. |.+.+. +...+..++.||+.||+|||++||+||||||+||
T Consensus 72 ~l~h~niv-~~~~~~~~~~~~~lv~ey~~~g~--L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Ni 148 (274)
T cd05076 72 QVSHIHLA-FVHGVCVRGSENIMVEEFVEHGP--LDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNI 148 (274)
T ss_pred cCCCCCee-eEEEEEEeCCceEEEEecCCCCc--HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccE
Confidence 46798855 5554 44567889999999998 666653 3477888999999999999999999999999999
Q ss_pred EEecCC-------CEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHH-hCCC
Q psy3880 78 LLDDQM-------NVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLL-VGCP 149 (408)
Q Consensus 78 Ll~~~~-------~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll-~G~~ 149 (408)
|++..+ .+|++|||++...... ....+++.|+|||.+... ..++.++|+|||||++|+++ +|..
T Consensus 149 ll~~~~~~~~~~~~~kl~d~g~~~~~~~~---~~~~~~~~~~aPe~~~~~-----~~~~~~~Dv~slG~~l~el~~~g~~ 220 (274)
T cd05076 149 LLARLGLAEGTSPFIKLSDPGVSFTALSR---EERVERIPWIAPECVPGG-----NSLSTAADKWSFGTTLLEICFDGEV 220 (274)
T ss_pred EEeccCcccCccceeeecCCccccccccc---cccccCCcccCchhhcCC-----CCCCcHHHHHHHHHHHHHHHhCCCC
Confidence 997543 4899999987644322 234578889999988642 35788999999999999985 6888
Q ss_pred CCCCc
Q psy3880 150 PFWHR 154 (408)
Q Consensus 150 pf~~~ 154 (408)
||...
T Consensus 221 p~~~~ 225 (274)
T cd05076 221 PLKER 225 (274)
T ss_pred Ccccc
Confidence 88553
No 361
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=99.95 E-value=2.2e-27 Score=226.03 Aligned_cols=190 Identities=24% Similarity=0.409 Sum_probs=144.0
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC--------------CHHHHHHHHHHHHHHHHHHHHCCCee
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN--------------SNPALRYIMRQLFEALEHVHNHSVVH 69 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~--------------~~~~~r~i~~qil~aL~~LH~~~IvH 69 (408)
.+.|++++ .+.. .+.+..++||||+.+|. |.+.+. +...+..++.||+.||+|||+++|+|
T Consensus 64 ~l~h~~iv-~~~~~~~~~~~~~lv~e~~~~~~--L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H 140 (275)
T cd05046 64 KLSHKNVV-RLLGLCREAEPHYMILEYTDLGD--LKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVH 140 (275)
T ss_pred hcCCccee-eeEEEECCCCcceEEEEecCCCc--HHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCccc
Confidence 46788855 5543 44567899999999998 776652 35778999999999999999999999
Q ss_pred ccCCCCcEEEecCCCEEEeccccchhcccCc--ccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHh-
Q psy3880 70 RDLKPENILLDDQMNVKLTDFGFARVLKKGE--KLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV- 146 (408)
Q Consensus 70 RDLKp~NILl~~~~~iKl~DFGla~~~~~~~--~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~- 146 (408)
|||||+|||++.++.++++|||++....... ......+++.|+|||.+.. ..++.++|+||+||++|++++
T Consensus 141 ~dlkp~Nili~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~------~~~~~~~Di~slG~~l~~l~~~ 214 (275)
T cd05046 141 RDLAARNCLVSSQREVKVSLLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQE------DDFSTKSDVWSFGVLMWEVFTQ 214 (275)
T ss_pred CcCccceEEEeCCCcEEEcccccccccCcccccccCCceeEEeecChhhhcc------CCCCchhhHHHHHHHHHHHHhC
Confidence 9999999999999999999999986543221 1223456678999998864 235688999999999999998
Q ss_pred CCCCCCCchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchh
Q psy3880 147 GCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQ 226 (408)
Q Consensus 147 G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~ 226 (408)
|..||........+..+.
T Consensus 215 ~~~p~~~~~~~~~~~~~~-------------------------------------------------------------- 232 (275)
T cd05046 215 GELPFYGLSDEEVLNRLQ-------------------------------------------------------------- 232 (275)
T ss_pred CCCCccccchHHHHHHHH--------------------------------------------------------------
Confidence 777885544333322222
Q ss_pred HHHHHHHHhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcC
Q psy3880 227 MVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNH 276 (408)
Q Consensus 227 ~~~~~~i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~H 276 (408)
.+...+.. ....+..++++|.+||+.||++|||+.|++++
T Consensus 233 --------~~~~~~~~--~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~ 272 (275)
T cd05046 233 --------AGKLELPV--PEGCPSRLYKLMTRCWAVNPKDRPSFSELVSA 272 (275)
T ss_pred --------cCCcCCCC--CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence 11111111 12467789999999999999999999999874
No 362
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=99.95 E-value=1.5e-27 Score=224.48 Aligned_cols=139 Identities=21% Similarity=0.269 Sum_probs=108.1
Q ss_pred ccccCCcEEEEeccCCcHHHHHHHHHhhchhhHHhhhC------CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEE
Q psy3880 6 MVAHSRVVVRVKEEGDDLKHLAAQVVDKGEAAVQDIIN------SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILL 79 (408)
Q Consensus 6 ~~~~~~~i~~~~~~~~~~~~lv~e~~~~g~~~l~~~~~------~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl 79 (408)
.+.|++++..+.....+..++||||+.+|. |.+++. +...+..++.||+.||+|||++||+||||||+|||+
T Consensus 57 ~l~h~~i~~~~~~~~~~~~~lv~e~~~~~~--L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill 134 (259)
T cd05037 57 QLSHKHLVKLYGVCVRDENIMVEEYVKFGP--LDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILV 134 (259)
T ss_pred cCCCcchhheeeEEecCCcEEEEEcCCCCc--HHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEE
Confidence 467998663333222256789999999998 777664 336788899999999999999999999999999999
Q ss_pred ecCC-------CEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHh-CCCCC
Q psy3880 80 DDQM-------NVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPF 151 (408)
Q Consensus 80 ~~~~-------~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~-G~~pf 151 (408)
+.++ .+||+|||++..+... ....++..|+|||++... ...++.++|+||+||++|++++ |..||
T Consensus 135 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~~y~aPE~~~~~----~~~~~~~~Di~slG~~~~~l~~~~~~p~ 207 (259)
T cd05037 135 ARYGLNEGYVPFIKLSDPGIPITVLSR---EERVERIPWIAPECIRNG----QASLTIAADKWSFGTTLLEICSNGEEPL 207 (259)
T ss_pred ecCccccCCceeEEeCCCCcccccccc---cccccCCCccChhhhcCC----CCCcchhhHHHHHHHHHHHHHhCCCCCc
Confidence 9877 7999999999865432 234567789999998642 1356788899999999999888 45666
Q ss_pred CC
Q psy3880 152 WH 153 (408)
Q Consensus 152 ~~ 153 (408)
..
T Consensus 208 ~~ 209 (259)
T cd05037 208 ST 209 (259)
T ss_pred cc
Confidence 43
No 363
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=99.94 E-value=2.1e-27 Score=225.48 Aligned_cols=191 Identities=28% Similarity=0.464 Sum_probs=145.5
Q ss_pred ccccCCcEEEEe-ccCCcHHHHHHHHHhhchhhHHhhh---------CCHHHHHHHHHHHHHHHHHHHH-CCCeeccCCC
Q psy3880 6 MVAHSRVVVRVK-EEGDDLKHLAAQVVDKGEAAVQDII---------NSNPALRYIMRQLFEALEHVHN-HSVVHRDLKP 74 (408)
Q Consensus 6 ~~~~~~~i~~~~-~~~~~~~~lv~e~~~~g~~~l~~~~---------~~~~~~r~i~~qil~aL~~LH~-~~IvHRDLKp 74 (408)
.+.|+|++..+. ...++..++||||+.|+. |.+.+ .+...+..++.|++.||.|||+ .+++|+||||
T Consensus 65 ~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~--l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~ 142 (269)
T cd08528 65 QLRHPNIVRYYKTFLENDRLYIVMDLIEGAP--LGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTP 142 (269)
T ss_pred cCCCCCeeeEEeeEccCCeEEEEEecCCCCc--HHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCH
Confidence 367888654333 245667899999999987 65554 2346788999999999999996 7899999999
Q ss_pred CcEEEecCCCEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCc
Q psy3880 75 ENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHR 154 (408)
Q Consensus 75 ~NILl~~~~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~ 154 (408)
+||+++.++.+||+|||++.............|+..|+|||.+.. ..++.++|+||+|+++|+|++|..||...
T Consensus 143 ~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~Pe~~~~------~~~~~~~Dv~slG~ll~~l~~g~~p~~~~ 216 (269)
T cd08528 143 NNIMLGEDDKVTITDFGLAKQKQPESKLTSVVGTILYSCPEIVKN------EPYGEKADVWAFGCILYQMCTLQPPFYST 216 (269)
T ss_pred HHEEECCCCcEEEecccceeecccccccccccCcccCcChhhhcC------CCCchHHHHHHHHHHHHHHHhCCCccccc
Confidence 999999999999999999987655444445678999999999864 33678899999999999999998888654
Q ss_pred hhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHH
Q psy3880 155 KQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIM 234 (408)
Q Consensus 155 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~ 234 (408)
+.......+..
T Consensus 217 ~~~~~~~~~~~--------------------------------------------------------------------- 227 (269)
T cd08528 217 NMLSLATKIVE--------------------------------------------------------------------- 227 (269)
T ss_pred CHHHHHHHHhh---------------------------------------------------------------------
Confidence 43332222221
Q ss_pred hcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcC
Q psy3880 235 EGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNH 276 (408)
Q Consensus 235 ~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~H 276 (408)
+.+. .......++++.+||.+||+.||++|||+.|+..+
T Consensus 228 -~~~~--~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~ 266 (269)
T cd08528 228 -AVYE--PLPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAM 266 (269)
T ss_pred -ccCC--cCCcccCCHHHHHHHHHHCCCCCccCCCHHHHHHH
Confidence 1111 11112467889999999999999999999998754
No 364
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=99.94 E-value=3e-27 Score=228.23 Aligned_cols=143 Identities=20% Similarity=0.394 Sum_probs=112.4
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhCC----------------HHHHHHHHHHHHHHHHHHHHCCC
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIINS----------------NPALRYIMRQLFEALEHVHNHSV 67 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~~----------------~~~~r~i~~qil~aL~~LH~~~I 67 (408)
.+.|++++ .+.+ ..++..++||||+.+|. |.+++.. ..++..++.|++.||+|||++||
T Consensus 75 ~l~~~~i~-~~~~~~~~~~~~~lv~e~~~~~~--L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i 151 (296)
T cd05095 75 RLKDPNII-RLLAVCITSDPLCMITEYMENGD--LNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNF 151 (296)
T ss_pred hCCCCCcc-eEEEEEecCCccEEEEEeCCCCc--HHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 46788765 4443 44567899999999998 8777643 24789999999999999999999
Q ss_pred eeccCCCCcEEEecCCCEEEeccccchhcccCccc---ccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHH
Q psy3880 68 VHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKL---MDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTL 144 (408)
Q Consensus 68 vHRDLKp~NILl~~~~~iKl~DFGla~~~~~~~~~---~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~l 144 (408)
+||||||+|||++.++.++|+|||++..+...... ....+++.|+|||.... ..++.++|+||+||++|+|
T Consensus 152 ~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~------~~~~~~~DiwSlG~~l~el 225 (296)
T cd05095 152 VHRDLATRNCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILL------GKFTTASDVWAFGVTLWEI 225 (296)
T ss_pred ecccCChheEEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhc------CCccchhhhhHHHHHHHHH
Confidence 99999999999999999999999998765433211 12334568999998754 3477899999999999999
Q ss_pred Hh--CCCCCCCchhH
Q psy3880 145 LV--GCPPFWHRKQM 157 (408)
Q Consensus 145 l~--G~~pf~~~~~~ 157 (408)
++ |..||...+..
T Consensus 226 ~~~~~~~p~~~~~~~ 240 (296)
T cd05095 226 LTLCKEQPYSQLSDE 240 (296)
T ss_pred HHhCCCCCccccChH
Confidence 98 66788654433
No 365
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=99.94 E-value=2.8e-27 Score=226.18 Aligned_cols=189 Identities=25% Similarity=0.347 Sum_probs=143.4
Q ss_pred ccccCCcEEEEeccCCcHHHHHHHHHhhchhhHHhhhCC------HHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEE
Q psy3880 6 MVAHSRVVVRVKEEGDDLKHLAAQVVDKGEAAVQDIINS------NPALRYIMRQLFEALEHVHNHSVVHRDLKPENILL 79 (408)
Q Consensus 6 ~~~~~~~i~~~~~~~~~~~~lv~e~~~~g~~~l~~~~~~------~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl 79 (408)
.+.|+|++..+....+...++|+||+.+|. |.+.+.+ +..+..++.||+.||+|||++||+||||||+|||+
T Consensus 65 ~l~h~~i~~~~~~~~~~~~~~v~e~~~~g~--L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~ 142 (279)
T cd05057 65 SVDHPHVVRLLGICLSSQVQLITQLMPLGC--LLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLV 142 (279)
T ss_pred hCCCCCcceEEEEEecCceEEEEecCCCCc--HHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEE
Confidence 467998664443333467789999999998 8777643 57889999999999999999999999999999999
Q ss_pred ecCCCEEEeccccchhcccCcccc---cCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHh-CCCCCCCch
Q psy3880 80 DDQMNVKLTDFGFARVLKKGEKLM---DLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPFWHRK 155 (408)
Q Consensus 80 ~~~~~iKl~DFGla~~~~~~~~~~---~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~-G~~pf~~~~ 155 (408)
+.++.+||+|||+++.+....... ...++..|+|||.+.. ..++.++|+||+||++|++++ |..||.+.+
T Consensus 143 ~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~------~~~~~~~Di~slG~~l~el~~~g~~p~~~~~ 216 (279)
T cd05057 143 KTPQHVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESILH------RIYTHKSDVWSYGVTVWELMTFGAKPYEGIP 216 (279)
T ss_pred cCCCeEEECCCcccccccCcccceecCCCcccccccCHHHhhc------CCcCchhhHHHHHHHHHHHhcCCCCCCCCCC
Confidence 999999999999998765432211 1223567999998753 356789999999999999998 999986654
Q ss_pred hHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHh
Q psy3880 156 QMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIME 235 (408)
Q Consensus 156 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~ 235 (408)
..+....+..+
T Consensus 217 ~~~~~~~~~~~--------------------------------------------------------------------- 227 (279)
T cd05057 217 AVEIPDLLEKG--------------------------------------------------------------------- 227 (279)
T ss_pred HHHHHHHHhCC---------------------------------------------------------------------
Confidence 43333322211
Q ss_pred cCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHc
Q psy3880 236 GKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALN 275 (408)
Q Consensus 236 ~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~ 275 (408)
. .++.+ ...+.++.+++.+||..||++|||+.++++
T Consensus 228 -~-~~~~~--~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~ 263 (279)
T cd05057 228 -E-RLPQP--PICTIDVYMVLVKCWMIDAESRPTFKELIN 263 (279)
T ss_pred -C-CCCCC--CCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 0 01111 134678899999999999999999998864
No 366
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=99.94 E-value=2.4e-27 Score=225.26 Aligned_cols=188 Identities=19% Similarity=0.390 Sum_probs=139.5
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC------CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcE
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN------SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENI 77 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~------~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NI 77 (408)
.+.|+|++ .+.. ..++..++||||+.+|. |.+.+. +..++..++.|++.||+|||++|++||||||+||
T Consensus 61 ~l~h~ni~-~~~~~~~~~~~~~lv~e~~~~~~--L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~ni 137 (269)
T cd05065 61 QFDHPNII-HLEGVVTKSRPVMIITEFMENGA--LDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNI 137 (269)
T ss_pred hCCCcCcc-eEEEEECCCCceEEEEecCCCCc--HHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheE
Confidence 46799866 4443 44556789999999997 766653 3367899999999999999999999999999999
Q ss_pred EEecCCCEEEeccccchhcccCccc---ccCC---CCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHh-CCCC
Q psy3880 78 LLDDQMNVKLTDFGFARVLKKGEKL---MDLC---GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPP 150 (408)
Q Consensus 78 Ll~~~~~iKl~DFGla~~~~~~~~~---~~~~---gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~-G~~p 150 (408)
+++.++.+||+|||++..+...... .... .+..|+|||.+.. ..++.++|+||+||++|++++ |..|
T Consensus 138 li~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~------~~~~~~~DvwslG~~l~e~l~~g~~p 211 (269)
T cd05065 138 LVNSNLVCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAY------RKFTSASDVWSYGIVMWEVMSYGERP 211 (269)
T ss_pred EEcCCCcEEECCCccccccccCccccccccccCCCcceeecCHhHhcc------CcccchhhhhhhHHHHHHHhcCCCCC
Confidence 9999999999999998765432211 1111 2347999999864 346778899999988888775 8888
Q ss_pred CCCchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHH
Q psy3880 151 FWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVML 230 (408)
Q Consensus 151 f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~ 230 (408)
|...+.......+..
T Consensus 212 ~~~~~~~~~~~~i~~----------------------------------------------------------------- 226 (269)
T cd05065 212 YWDMSNQDVINAIEQ----------------------------------------------------------------- 226 (269)
T ss_pred CCCCCHHHHHHHHHc-----------------------------------------------------------------
Confidence 766544333333211
Q ss_pred HHHHhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHc
Q psy3880 231 RNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALN 275 (408)
Q Consensus 231 ~~i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~ 275 (408)
. ... +.....+.++.+++.+||..||++|||+++++.
T Consensus 227 -----~-~~~--~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 263 (269)
T cd05065 227 -----D-YRL--PPPMDCPTALHQLMLDCWQKDRNARPKFGQIVS 263 (269)
T ss_pred -----C-CcC--CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 0 111 112346778999999999999999999999875
No 367
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=99.94 E-value=2.3e-27 Score=226.65 Aligned_cols=189 Identities=20% Similarity=0.338 Sum_probs=141.2
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC-------------CHHHHHHHHHHHHHHHHHHHHCCCeec
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN-------------SNPALRYIMRQLFEALEHVHNHSVVHR 70 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~-------------~~~~~r~i~~qil~aL~~LH~~~IvHR 70 (408)
.+.|+|++..+.. +.+...++++|++.+|. |.+.+. +..++..++.|++.||+|||+++++||
T Consensus 64 ~l~h~ni~~~~~~~~~~~~~~~~~~~~~~~~~--L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~ 141 (280)
T cd05043 64 GLSHQNILPILHVCIEDGEPPFVLYPYMNWGN--LKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHK 141 (280)
T ss_pred hCCCCCCCeEEEEEecCCCCCEEEEEcCCCCc--HHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeec
Confidence 3589987643332 33467789999999887 766653 346788999999999999999999999
Q ss_pred cCCCCcEEEecCCCEEEeccccchhcccCccc---ccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHh-
Q psy3880 71 DLKPENILLDDQMNVKLTDFGFARVLKKGEKL---MDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV- 146 (408)
Q Consensus 71 DLKp~NILl~~~~~iKl~DFGla~~~~~~~~~---~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~- 146 (408)
||||+||++++++.+||+|||+++.+...... ....++..|+|||.+.. ..++.++|+||+||++|++++
T Consensus 142 di~p~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~------~~~~~~~Di~slG~~l~el~~~ 215 (280)
T cd05043 142 DIAARNCVIDEELQVKITDNALSRDLFPMDYHCLGDNENRPVKWMALESLVN------KEYSSASDVWSFGVLLWELMTL 215 (280)
T ss_pred ccCHhhEEEcCCCcEEECCCCCcccccCCceEEeCCCCCcchhccCHHHHhc------CCCCchhhHHHhHHHHHHHhcC
Confidence 99999999999999999999999866433211 12345668999998864 346788999999999999988
Q ss_pred CCCCCCCchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchh
Q psy3880 147 GCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQ 226 (408)
Q Consensus 147 G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~ 226 (408)
|..||...+..+....+.
T Consensus 216 g~~p~~~~~~~~~~~~~~-------------------------------------------------------------- 233 (280)
T cd05043 216 GQTPYVEIDPFEMAAYLK-------------------------------------------------------------- 233 (280)
T ss_pred CCCCcCcCCHHHHHHHHH--------------------------------------------------------------
Confidence 888886544333222111
Q ss_pred HHHHHHHHhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHc
Q psy3880 227 MVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALN 275 (408)
Q Consensus 227 ~~~~~~i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~ 275 (408)
. .+.+ +.+..+++++++++.+||..||++|||+.|+++
T Consensus 234 --------~-~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 271 (280)
T cd05043 234 --------D-GYRL--AQPINCPDELFAVMACCWALDPEERPSFSQLVQ 271 (280)
T ss_pred --------c-CCCC--CCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 1 1111 112345788999999999999999999999985
No 368
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=99.94 E-value=2e-27 Score=234.90 Aligned_cols=103 Identities=30% Similarity=0.483 Sum_probs=84.7
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEecCCCEEEeccccchhcccCcc---cccCCCCCcccChhhhhhccc
Q psy3880 46 PALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEK---LMDLCGTPGYLAPEVLRANMF 122 (408)
Q Consensus 46 ~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl~~~~~iKl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~l~~~~~ 122 (408)
..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||++........ .....+++.|+|||.+..
T Consensus 179 ~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--- 255 (343)
T cd05103 179 EDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFD--- 255 (343)
T ss_pred HHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCCCcceECcHHhcC---
Confidence 45677899999999999999999999999999999999999999999876533211 112345667999999854
Q ss_pred cCcCCCCcchhhhhhhHHHHHHHh-CCCCCCCc
Q psy3880 123 EDATGYGQAVDVWACGVIMYTLLV-GCPPFWHR 154 (408)
Q Consensus 123 ~~~~~~~~~~DiwSlGvil~~ll~-G~~pf~~~ 154 (408)
..++.++|+||+||++|++++ |..||.+.
T Consensus 256 ---~~~~~~~Di~slG~~l~el~~~g~~p~~~~ 285 (343)
T cd05103 256 ---RVYTIQSDVWSFGVLLWEIFSLGASPYPGV 285 (343)
T ss_pred ---CCCCchhhHHHHHHHHHHHHHCCCCCCCCc
Confidence 357789999999999999997 88888553
No 369
>KOG0695|consensus
Probab=99.94 E-value=8.5e-28 Score=226.35 Aligned_cols=200 Identities=27% Similarity=0.528 Sum_probs=154.0
Q ss_pred CCcEEEEecc--CCcHHHHHHHHHhhchhhHHhhh-----CCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEecC
Q psy3880 10 SRVVVRVKEE--GDDLKHLAAQVVDKGEAAVQDII-----NSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQ 82 (408)
Q Consensus 10 ~~~i~~~~~~--~~~~~~lv~e~~~~g~~~l~~~~-----~~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl~~~ 82 (408)
.+++|-+..- .....++|.||++||+ |-... ..++.+|+|..+|..||.|||++|||+||||.+|+|++..
T Consensus 310 ~pflvglhscfqtesrlffvieyv~ggd--lmfhmqrqrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldae 387 (593)
T KOG0695|consen 310 NPFLVGLHSCFQTESRLFFVIEYVNGGD--LMFHMQRQRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAE 387 (593)
T ss_pred CCeEEehhhhhcccceEEEEEEEecCcc--eeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccC
Confidence 3466777653 3456788999999998 53333 3558999999999999999999999999999999999999
Q ss_pred CCEEEeccccchh-cccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHHHHH
Q psy3880 83 MNVKLTDFGFARV-LKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLR 161 (408)
Q Consensus 83 ~~iKl~DFGla~~-~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~~~~ 161 (408)
|.+||+|+|.++. +.++...+++||||.|.|||++++ ..|+..+|+|+|||+++||+.|+.||.-.-
T Consensus 388 ghikltdygmcke~l~~gd~tstfcgtpnyiapeilrg------eeygfsvdwwalgvlmfemmagrspfdivg------ 455 (593)
T KOG0695|consen 388 GHIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRG------EEYGFSVDWWALGVLMFEMMAGRSPFDIVG------ 455 (593)
T ss_pred CceeecccchhhcCCCCCcccccccCCCcccchhhhcc------cccCceehHHHHHHHHHHHHcCCCCcceec------
Confidence 9999999999875 456667778999999999999986 468888899999999999999988884210
Q ss_pred HHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCCCCC
Q psy3880 162 NIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFS 241 (408)
Q Consensus 162 ~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~~f~ 241 (408)
...|+ ..+..-+++-|++.....+
T Consensus 456 -------------------m~n~d-------------------------------------~ntedylfqvilekqirip 479 (593)
T KOG0695|consen 456 -------------------MDNPD-------------------------------------MNTEDYLFQVILEKQIRIP 479 (593)
T ss_pred -------------------CCCcc-------------------------------------cchhHHHHHHHhhhccccc
Confidence 00000 0011123444555554443
Q ss_pred CCcCCCCCccHHHHHHHhcccCCCCCCC------HHHHHcCCCCCCCC
Q psy3880 242 SPEWNDISEDPKDLIRKLLIVTPEDRYS------VKEALNHSFFHPKL 283 (408)
Q Consensus 242 ~~~~~~iS~~~~dLI~klL~~dP~~R~t------a~e~L~Hpwf~~~~ 283 (408)
..+|-.|...++..|.+||..|+. ..++..|+||....
T Consensus 480 ----rslsvkas~vlkgflnkdp~erlgc~~~~g~~dik~h~ffr~id 523 (593)
T KOG0695|consen 480 ----RSLSVKASHVLKGFLNKDPKERLGCRPQTGFSDIKSHAFFRSID 523 (593)
T ss_pred ----ceeehhhHHHHHHhhcCCcHHhcCCCcccchhhhhcchhhhhCC
Confidence 246778889999999999999985 67999999998543
No 370
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=99.94 E-value=8.7e-28 Score=258.93 Aligned_cols=139 Identities=31% Similarity=0.456 Sum_probs=110.5
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhCC----------------HHHHHHHHHHHHHHHHHHHHCCC
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIINS----------------NPALRYIMRQLFEALEHVHNHSV 67 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~~----------------~~~~r~i~~qil~aL~~LH~~~I 67 (408)
.+.|+|++ .+.. +.++..|+||||+.||. |.+.+.+ ...+..++.||+.||+|||++||
T Consensus 58 ~L~HPNIV-kl~~v~~d~~~lyLVMEY~eGGS--L~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GI 134 (932)
T PRK13184 58 DLIHPGIV-PVYSICSDGDPVYYTMPYIEGYT--LKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGV 134 (932)
T ss_pred hCCCcCcC-eEEEEEeeCCEEEEEEEcCCCCC--HHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 46799866 4443 45567899999999998 7766532 13567789999999999999999
Q ss_pred eeccCCCCcEEEecCCCEEEeccccchhcccCc-------------------ccccCCCCCcccChhhhhhccccCcCCC
Q psy3880 68 VHRDLKPENILLDDQMNVKLTDFGFARVLKKGE-------------------KLMDLCGTPGYLAPEVLRANMFEDATGY 128 (408)
Q Consensus 68 vHRDLKp~NILl~~~~~iKl~DFGla~~~~~~~-------------------~~~~~~gt~~y~aPE~l~~~~~~~~~~~ 128 (408)
+||||||+|||++.++.+||+|||+|....... .....+||+.|+|||++.+ ..+
T Consensus 135 IHRDLKPeNILLd~dg~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g------~~~ 208 (932)
T PRK13184 135 LHRDLKPDNILLGLFGEVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLG------VPA 208 (932)
T ss_pred cccCCchheEEEcCCCCEEEEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcC------CCC
Confidence 999999999999999999999999997652110 0112469999999998864 346
Q ss_pred CcchhhhhhhHHHHHHHhCCCCCCC
Q psy3880 129 GQAVDVWACGVIMYTLLVGCPPFWH 153 (408)
Q Consensus 129 ~~~~DiwSlGvil~~ll~G~~pf~~ 153 (408)
+.++|+||+||++|+|++|..||..
T Consensus 209 S~kSDIWSLGVILyELLTG~~PF~~ 233 (932)
T PRK13184 209 SESTDIYALGVILYQMLTLSFPYRR 233 (932)
T ss_pred CcHhHHHHHHHHHHHHHHCCCCCCC
Confidence 7889999999999999999988855
No 371
>KOG0193|consensus
Probab=99.94 E-value=1.1e-27 Score=240.24 Aligned_cols=144 Identities=26% Similarity=0.443 Sum_probs=117.8
Q ss_pred cCCcEEEEe-ccCCcHHHHHHHHHhhchhhHHhhhCCH------HHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEec
Q psy3880 9 HSRVVVRVK-EEGDDLKHLAAQVVDKGEAAVQDIINSN------PALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDD 81 (408)
Q Consensus 9 ~~~~i~~~~-~~~~~~~~lv~e~~~~g~~~l~~~~~~~------~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl~~ 81 (408)
|.|++ -+. +--.+...||..+|+|-. |+.++.-. .+++.|++||++|+.|||.++|||||||..||++.+
T Consensus 447 H~NIl-LFMG~~~~p~~AIiTqwCeGsS--LY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~ 523 (678)
T KOG0193|consen 447 HENIL-LFMGACMNPPLAIITQWCEGSS--LYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHE 523 (678)
T ss_pred hhhhe-eeehhhcCCceeeeehhccCch--hhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEcc
Confidence 77755 444 333334489999999988 88887532 578999999999999999999999999999999999
Q ss_pred CCCEEEeccccchhcc---cCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHH
Q psy3880 82 QMNVKLTDFGFARVLK---KGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMV 158 (408)
Q Consensus 82 ~~~iKl~DFGla~~~~---~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~ 158 (408)
++.|||+|||++..-. ....+....|+..|||||+++.+ +..+|+..+|||||||++|||++|..||...+..+
T Consensus 524 ~~kVkIgDFGLatvk~~w~g~~q~~qp~gsilwmAPEvIRmq---d~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dq 600 (678)
T KOG0193|consen 524 DLKVKIGDFGLATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQ---DDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQ 600 (678)
T ss_pred CCcEEEecccceeeeeeeccccccCCCccchhhhcHHHHhhc---ccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhh
Confidence 9999999999986432 23344556788899999999843 35789999999999999999999999997555443
No 372
>KOG0587|consensus
Probab=99.94 E-value=7.7e-28 Score=249.66 Aligned_cols=199 Identities=30% Similarity=0.489 Sum_probs=155.8
Q ss_pred ccCCcEEEEecc-------CCcHHHHHHHHHhhchhhHHhhhC-------CHHHHHHHHHHHHHHHHHHHHCCCeeccCC
Q psy3880 8 AHSRVVVRVKEE-------GDDLKHLAAQVVDKGEAAVQDIIN-------SNPALRYIMRQLFEALEHVHNHSVVHRDLK 73 (408)
Q Consensus 8 ~~~~~i~~~~~~-------~~~~~~lv~e~~~~g~~~l~~~~~-------~~~~~r~i~~qil~aL~~LH~~~IvHRDLK 73 (408)
.|+| ++.++.. .+|-..||||||.||. +-|.+. +++.+.+|++.++.|+.+||.+.++|||+|
T Consensus 74 ~hpn-v~~fyg~~~k~~~~~~DqLWLVMEfC~gGS--VTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDik 150 (953)
T KOG0587|consen 74 HHPN-VATFYGAFIKKDPGNGDQLWLVMEFCGGGS--VTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIK 150 (953)
T ss_pred CCCC-cceEEEEEEEecCCCCCeEEEEeeccCCcc--HHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeeccc
Confidence 4555 6566652 4677899999999998 555542 458899999999999999999999999999
Q ss_pred CCcEEEecCCCEEEeccccchhcccCc-ccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCC
Q psy3880 74 PENILLDDQMNVKLTDFGFARVLKKGE-KLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFW 152 (408)
Q Consensus 74 p~NILl~~~~~iKl~DFGla~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~ 152 (408)
-.|||++.++.||++|||++..++... .-.+..|||+|||||++.+..-. ...|+..+|+||||++..||..|.+|+.
T Consensus 151 G~NiLLT~e~~VKLvDFGvSaQldsT~grRnT~iGtP~WMAPEViac~e~~-d~tyd~R~D~WsLGITaIEladG~PPl~ 229 (953)
T KOG0587|consen 151 GQNVLLTENAEVKLVDFGVSAQLDSTVGRRNTFIGTPYWMAPEVIACDESP-DATYDYRSDLWSLGITAIEMAEGAPPLC 229 (953)
T ss_pred CceEEEeccCcEEEeeeeeeeeeecccccccCcCCCcccccceeeecccCC-CCCcccccchhhccceeehhcCCCCCcc
Confidence 999999999999999999998876432 23467899999999999876433 3467889999999999999999998886
Q ss_pred CchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHH
Q psy3880 153 HRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRN 232 (408)
Q Consensus 153 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~ 232 (408)
+.-....+-+|- ..||-
T Consensus 230 DmHPmraLF~Ip----------------------------------------------------RNPPP----------- 246 (953)
T KOG0587|consen 230 DMHPMRALFLIP----------------------------------------------------RNPPP----------- 246 (953)
T ss_pred CcchhhhhccCC----------------------------------------------------CCCCc-----------
Confidence 544322221111 11111
Q ss_pred HHhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCC
Q psy3880 233 IMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHP 281 (408)
Q Consensus 233 i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~ 281 (408)
....|..-|.+..|||..||.+|-.+||+..++|.|||+..
T Consensus 247 --------kLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~hpFi~e 287 (953)
T KOG0587|consen 247 --------KLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKHPFITE 287 (953)
T ss_pred --------cccchhhHHHHHHHHHHHHHhhccccCcchhhhccCCcccc
Confidence 11234556889999999999999999999999999999973
No 373
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=99.94 E-value=7.1e-27 Score=236.09 Aligned_cols=152 Identities=22% Similarity=0.355 Sum_probs=115.9
Q ss_pred HHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEecCCCEEEeccccchhcccCcc---cccCCCCCcccChhhhhhcccc
Q psy3880 47 ALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEK---LMDLCGTPGYLAPEVLRANMFE 123 (408)
Q Consensus 47 ~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl~~~~~iKl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~l~~~~~~ 123 (408)
.+..++.||+.||+|||+++|+||||||+|||+++++.+||+|||+++....... .....+++.|+|||.+..
T Consensus 240 ~~~~~~~qi~~aL~~LH~~~ivHrdlkp~NiLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~---- 315 (401)
T cd05107 240 DLVGFSYQVANGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFN---- 315 (401)
T ss_pred HHHHHHHHHHHHHHHHhcCCcCcccCCcceEEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcC----
Confidence 4567889999999999999999999999999999999999999999976533221 123456788999999864
Q ss_pred CcCCCCcchhhhhhhHHHHHHHh-CCCCCCCchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcc
Q psy3880 124 DATGYGQAVDVWACGVIMYTLLV-GCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAV 202 (408)
Q Consensus 124 ~~~~~~~~~DiwSlGvil~~ll~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~ 202 (408)
..++.++|+||+||++|+|++ |..||......+.+.....
T Consensus 316 --~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~~~~~~------------------------------------- 356 (401)
T cd05107 316 --NLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYNAIK------------------------------------- 356 (401)
T ss_pred --CCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHHHHHHH-------------------------------------
Confidence 346789999999999999998 8888855432222111111
Q ss_pred cccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcC
Q psy3880 203 DVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNH 276 (408)
Q Consensus 203 DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~H 276 (408)
.+ ... +....++.++.+||.+|+..||.+|||+.|+++.
T Consensus 357 --------------------------------~~-~~~--~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~ 395 (401)
T cd05107 357 --------------------------------RG-YRM--AKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHL 395 (401)
T ss_pred --------------------------------cC-CCC--CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 00 011 1113468899999999999999999999999863
No 374
>KOG2345|consensus
Probab=99.94 E-value=9.8e-28 Score=218.09 Aligned_cols=180 Identities=27% Similarity=0.409 Sum_probs=136.1
Q ss_pred cHHHHHHHHHhhchhhHHhhhC---------CHHHHHHHHHHHHHHHHHHHHCC--CeeccCCCCcEEEecCCCEEEecc
Q psy3880 22 DLKHLAAQVVDKGEAAVQDIIN---------SNPALRYIMRQLFEALEHVHNHS--VVHRDLKPENILLDDQMNVKLTDF 90 (408)
Q Consensus 22 ~~~~lv~e~~~~g~~~l~~~~~---------~~~~~r~i~~qil~aL~~LH~~~--IvHRDLKp~NILl~~~~~iKl~DF 90 (408)
...||++.|...|. |.|.+. ++.++..++.+|++||++||+.. ..||||||.|||+++++.+++.||
T Consensus 96 ~~~yll~Pyy~~Gs--l~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D~ 173 (302)
T KOG2345|consen 96 HEAYLLLPYYKRGS--LLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMDL 173 (302)
T ss_pred eeEEEEeehhcccc--HHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEec
Confidence 34689999999998 777664 45789999999999999999999 999999999999999999999999
Q ss_pred ccchhccc----Cc---cc---ccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHHHH
Q psy3880 91 GFARVLKK----GE---KL---MDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVML 160 (408)
Q Consensus 91 Gla~~~~~----~~---~~---~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~~~ 160 (408)
|.+....- .. .+ .....|..|+|||.+.... ....+.++|||||||++|+|+.|..||...-+
T Consensus 174 GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~---~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~---- 246 (302)
T KOG2345|consen 174 GSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKS---HCTITERTDIWSLGCTLYAMMFGESPFERIYQ---- 246 (302)
T ss_pred cCccccceEeechHHHHHHHHHHHHhCCCcccCchheeccc---CcccccccchhhhhHHHHHHHHcCCcchHHhh----
Confidence 99865421 11 01 1234688999999997643 23356788999999999999988888832110
Q ss_pred HHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCCCC
Q psy3880 161 RNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240 (408)
Q Consensus 161 ~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~~f 240 (408)
+.|--++ .+.++++.+
T Consensus 247 ----------------------------------------~GgSlaL------------------------Av~n~q~s~ 262 (302)
T KOG2345|consen 247 ----------------------------------------QGGSLAL------------------------AVQNAQISI 262 (302)
T ss_pred ----------------------------------------cCCeEEE------------------------eeecccccc
Confidence 0010011 233444555
Q ss_pred CCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcC
Q psy3880 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNH 276 (408)
Q Consensus 241 ~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~H 276 (408)
+.. ...|+....||+.||++||.+|||+.+++++
T Consensus 263 P~~--~~yse~l~~lik~mlqvdP~qRP~i~~ll~~ 296 (302)
T KOG2345|consen 263 PNS--SRYSEALHQLIKSMLQVDPNQRPTIPELLSK 296 (302)
T ss_pred CCC--CCccHHHHHHHHHHhcCCcccCCCHHHHHHH
Confidence 432 3489999999999999999999999999875
No 375
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=99.94 E-value=1.2e-26 Score=222.15 Aligned_cols=139 Identities=27% Similarity=0.450 Sum_probs=110.2
Q ss_pred ccccCCcEEEEec----cCCcHHHHHHHHHhhchhhHHhhhC------CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCC
Q psy3880 6 MVAHSRVVVRVKE----EGDDLKHLAAQVVDKGEAAVQDIIN------SNPALRYIMRQLFEALEHVHNHSVVHRDLKPE 75 (408)
Q Consensus 6 ~~~~~~~i~~~~~----~~~~~~~lv~e~~~~g~~~l~~~~~------~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~ 75 (408)
.+.|+|++ .+.. .++...++|+||+.+|. |.+.+. +...+..++.|++.||+|||++||+||||||+
T Consensus 61 ~l~h~~iv-~~~~~~~~~~~~~~~lv~e~~~~~~--L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~ 137 (284)
T cd05081 61 SLQHDNIV-KYKGVCYSAGRRNLRLVMEYLPYGS--LRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATR 137 (284)
T ss_pred hCCCCCee-EEEEEEccCCCCceEEEEEecCCCC--HHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHh
Confidence 47899855 5433 33456789999999998 877763 34778899999999999999999999999999
Q ss_pred cEEEecCCCEEEeccccchhcccCcccc----cCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCC
Q psy3880 76 NILLDDQMNVKLTDFGFARVLKKGEKLM----DLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151 (408)
Q Consensus 76 NILl~~~~~iKl~DFGla~~~~~~~~~~----~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf 151 (408)
||+++.++.+||+|||++..+....... ...++..|+|||.+.. ..++.++|+||+||++|+|++|..|+
T Consensus 138 nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~~l~el~~~~~~~ 211 (284)
T cd05081 138 NILVESENRVKIGDFGLTKVLPQDKEYYKVREPGESPIFWYAPESLTE------SKFSVASDVWSFGVVLYELFTYSDKS 211 (284)
T ss_pred hEEECCCCeEEECCCcccccccCCCcceeecCCCCCceEeeCHHHhcc------CCcChHHHHHHHHHHHHHHhhcCCcC
Confidence 9999999999999999998764432211 1223446999998864 34678999999999999999988776
Q ss_pred CC
Q psy3880 152 WH 153 (408)
Q Consensus 152 ~~ 153 (408)
..
T Consensus 212 ~~ 213 (284)
T cd05081 212 CS 213 (284)
T ss_pred CC
Confidence 43
No 376
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=99.94 E-value=2e-26 Score=218.96 Aligned_cols=189 Identities=22% Similarity=0.383 Sum_probs=138.8
Q ss_pred ccccCCcEEEEeccC-----Cc---HHHHHHHHHhhchhhHHhhh-----------CCHHHHHHHHHHHHHHHHHHHHCC
Q psy3880 6 MVAHSRVVVRVKEEG-----DD---LKHLAAQVVDKGEAAVQDII-----------NSNPALRYIMRQLFEALEHVHNHS 66 (408)
Q Consensus 6 ~~~~~~~i~~~~~~~-----~~---~~~lv~e~~~~g~~~l~~~~-----------~~~~~~r~i~~qil~aL~~LH~~~ 66 (408)
.+.|++++ .+.+.. .+ ..+++++|+.+|. |.+.+ .+...+..++.|++.||+|||++|
T Consensus 57 ~l~h~~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~ 133 (273)
T cd05074 57 EFDHPNVI-KLIGVSLRSRAKGRLPIPMVILPFMKHGD--LHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKN 133 (273)
T ss_pred cCCCCCcc-eEEEEEccCCCCCcccceEEEEecCCCCc--HHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 46888755 555421 11 2357788998887 65443 234678999999999999999999
Q ss_pred CeeccCCCCcEEEecCCCEEEeccccchhcccCccc---ccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHH
Q psy3880 67 VVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKL---MDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYT 143 (408)
Q Consensus 67 IvHRDLKp~NILl~~~~~iKl~DFGla~~~~~~~~~---~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ 143 (408)
|+||||||+||+++.++.+||+|||+++........ ....+++.|++||.+.. ..++.++|+|||||++|+
T Consensus 134 i~H~dikp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~------~~~~~~sDi~slG~il~e 207 (273)
T cd05074 134 FIHRDLAARNCMLNENMTVCVADFGLSKKIYSGDYYRQGCASKLPVKWLALESLAD------NVYTTHSDVWAFGVTMWE 207 (273)
T ss_pred EeecccchhhEEEcCCCCEEECcccccccccCCcceecCCCccCchhhcCHhHHhc------CccchhhhhHHHHHHHHH
Confidence 999999999999999999999999999866433211 12345678999998864 346789999999999999
Q ss_pred HHh-CCCCCCCchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCC
Q psy3880 144 LLV-GCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFW 222 (408)
Q Consensus 144 ll~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~ 222 (408)
|++ |.+||.+.+.......+..+
T Consensus 208 l~~~g~~p~~~~~~~~~~~~~~~~-------------------------------------------------------- 231 (273)
T cd05074 208 IMTRGQTPYAGVENSEIYNYLIKG-------------------------------------------------------- 231 (273)
T ss_pred HhhCCCCCCCCCCHHHHHHHHHcC--------------------------------------------------------
Confidence 998 88888665443332222211
Q ss_pred CchhHHHHHHHHhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcC
Q psy3880 223 HRKQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNH 276 (408)
Q Consensus 223 ~~~~~~~~~~i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~H 276 (408)
.. ...+ ...+.++.+++.+||..+|++|||+.|++.+
T Consensus 232 --------------~~-~~~~--~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~ 268 (273)
T cd05074 232 --------------NR-LKQP--PDCLEDVYELMCQCWSPEPKCRPSFQHLRDQ 268 (273)
T ss_pred --------------Cc-CCCC--CCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 00 0000 2357789999999999999999999998763
No 377
>KOG1167|consensus
Probab=99.93 E-value=6.9e-27 Score=226.36 Aligned_cols=225 Identities=28% Similarity=0.449 Sum_probs=144.6
Q ss_pred CCcHHHHHHHHHhhchhhHHhhh--CCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEec-CCCEEEeccccchhc
Q psy3880 20 GDDLKHLAAQVVDKGEAAVQDII--NSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDD-QMNVKLTDFGFARVL 96 (408)
Q Consensus 20 ~~~~~~lv~e~~~~g~~~l~~~~--~~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl~~-~~~iKl~DFGla~~~ 96 (408)
..|...+|+||....+ .-++. .+-++++.|++.++.||.++|++|||||||||.|+|.+. .+.-.|+|||+|...
T Consensus 106 nnd~v~ivlp~~~H~~--f~~l~~~l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~ 183 (418)
T KOG1167|consen 106 NNDQVAIVLPYFEHDR--FRDLYRSLSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRY 183 (418)
T ss_pred cCCeeEEEecccCccC--HHHHHhcCCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccccccCCceEEechhHHHH
Confidence 3455678888887776 43333 345899999999999999999999999999999999984 456789999998721
Q ss_pred c-----------------c--Cc--------------------------ccccCCCCCcccChhhhhhccccCcCCCCcc
Q psy3880 97 K-----------------K--GE--------------------------KLMDLCGTPGYLAPEVLRANMFEDATGYGQA 131 (408)
Q Consensus 97 ~-----------------~--~~--------------------------~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~ 131 (408)
+ + +. ......||++|+|||++..- ...+++
T Consensus 184 d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~-----~~Qtta 258 (418)
T KOG1167|consen 184 DGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRC-----PRQTTA 258 (418)
T ss_pred HhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhc-----cCcCCc
Confidence 1 0 00 00124699999999999752 445789
Q ss_pred hhhhhhhHHHHHHHhCCCCCCCch-hHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCC-----ccccc
Q psy3880 132 VDVWACGVIMYTLLVGCPPFWHRK-QMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQ-----AVDVW 205 (408)
Q Consensus 132 ~DiwSlGvil~~ll~G~~pf~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~-----~~DiW 205 (408)
+|+||.|||+..++++..||.... +...+..|..... ++.++.- +.-+|. ++-+-
T Consensus 259 iDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG---------------~~~mrk~----A~l~g~~~l~~ksn~~ 319 (418)
T KOG1167|consen 259 IDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFG---------------SAEMRKC----AALPGRILLWQKSNIP 319 (418)
T ss_pred cceeeccceeehhhccccccccCccccchHHHHHHHhC---------------hHHHHHH----hhcCCceeeecccccc
Confidence 999999999999999999997654 3344444432111 0000000 000000 00011
Q ss_pred chhhhHHHhhcCCCCCCCchhHHHHHHHHhcCC-CCCCCcCCCC-CccHHHHHHHhcccCCCCCCCHHHHHcCCCCCC
Q psy3880 206 ACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKY-SFSSPEWNDI-SEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHP 281 (408)
Q Consensus 206 s~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~-~f~~~~~~~i-S~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~ 281 (408)
+++.+.. .|.... ...+.++.. ......|.++ +..+.||++|||..||.+|+||+|+|+||||..
T Consensus 320 ~~~e~~~-------~f~s~~----~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF~~ 386 (418)
T KOG1167|consen 320 TIPELRV-------NFETLH----IESIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFFDE 386 (418)
T ss_pred ccHHHHh-------chhccC----hhhcccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCcCCcc
Confidence 1111110 011000 112222111 1223345444 458999999999999999999999999999984
No 378
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.93 E-value=1.4e-26 Score=213.85 Aligned_cols=194 Identities=46% Similarity=0.789 Sum_probs=145.9
Q ss_pred cccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhh-----CCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEE
Q psy3880 7 VAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDII-----NSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILL 79 (408)
Q Consensus 7 ~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~-----~~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl 79 (408)
+.|++++ .+.+ ..++..++++|++.++. |.+.+ .+...+..++.+++.++.+||+.+|+|+||+|.||++
T Consensus 44 l~~~~i~-~~~~~~~~~~~~~l~~e~~~~~~--L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~ 120 (244)
T smart00220 44 LKHPNIV-RLYDVFEDEDKLYLVMEYCDGGD--LFDLLKKRGRLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILL 120 (244)
T ss_pred CCCCcHH-HHHhheeeCCEEEEEEeCCCCCC--HHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEE
Confidence 4677654 4443 23356789999999887 77665 3557888999999999999999999999999999999
Q ss_pred ecCCCEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHHH
Q psy3880 80 DDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVM 159 (408)
Q Consensus 80 ~~~~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~~ 159 (408)
+.++.++++|||++.............++..|++||.+.. ..++.++|+||+|++++++++|..||....
T Consensus 121 ~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~------~~~~~~~Di~slG~~l~~l~~~~~p~~~~~---- 190 (244)
T smart00220 121 DEDGHVKLADFGLARQLDPGGLLTTFVGTPEYMAPEVLLG------KGYGKAVDVWSLGVILYELLTGKPPFPGDD---- 190 (244)
T ss_pred CCCCcEEEccccceeeeccccccccccCCcCCCCHHHHcc------CCCCchhhHHHHHHHHHHHHhCCCCCCCCC----
Confidence 9999999999999987765444456778899999998853 345667888888888888888877774421
Q ss_pred HHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCCC
Q psy3880 160 LRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYS 239 (408)
Q Consensus 160 ~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~~ 239 (408)
........+......
T Consensus 191 -----------------------------------------------------------------~~~~~~~~~~~~~~~ 205 (244)
T smart00220 191 -----------------------------------------------------------------QLLELFKKIGKPKPP 205 (244)
T ss_pred -----------------------------------------------------------------cHHHHHHHHhccCCC
Confidence 111122222222222
Q ss_pred CCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q psy3880 240 FSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFF 279 (408)
Q Consensus 240 f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf 279 (408)
.. ..+..++.++.+++.+||..||++|||+.++++||||
T Consensus 206 ~~-~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~~~~~ 244 (244)
T smart00220 206 FP-PPEWKISPEAKDLIRKLLVKDPEKRLTAEEALQHPFF 244 (244)
T ss_pred Cc-cccccCCHHHHHHHHHHccCCchhccCHHHHhhCCCC
Confidence 21 2222378899999999999999999999999999997
No 379
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.93 E-value=3.5e-26 Score=203.81 Aligned_cols=94 Identities=24% Similarity=0.367 Sum_probs=82.3
Q ss_pred CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEecCCCEEEeccccchhcccCcccccCCCCCcccChhhhhhcccc
Q psy3880 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFE 123 (408)
Q Consensus 44 ~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl~~~~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~ 123 (408)
++++++.++.||+.||+|||+++ ||+|||++.++.+|+ ||++...... ...||+.|+|||++.+
T Consensus 15 ~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~~~~~~--fG~~~~~~~~----~~~g~~~y~aPE~~~~---- 78 (176)
T smart00750 15 NEEEIWAVCLQCLRALRELHRQA------KSGNILLTWDGLLKL--DGSVAFKTPE----QSRVDPYFMAPEVIQG---- 78 (176)
T ss_pred CHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCccceee--ccceEeeccc----cCCCcccccChHHhcC----
Confidence 56889999999999999999999 999999999999999 9998765442 2368999999999965
Q ss_pred CcCCCCcchhhhhhhHHHHHHHhCCCCCCCch
Q psy3880 124 DATGYGQAVDVWACGVIMYTLLVGCPPFWHRK 155 (408)
Q Consensus 124 ~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~ 155 (408)
..|+.++||||+||++|+|++|..||....
T Consensus 79 --~~~~~~~DiwSlG~il~elltg~~p~~~~~ 108 (176)
T smart00750 79 --QSYTEKADIYSLGITLYEALDYELPYNEER 108 (176)
T ss_pred --CCCcchhhHHHHHHHHHHHHhCCCCccccc
Confidence 357889999999999999999999996543
No 380
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=99.93 E-value=1e-26 Score=220.71 Aligned_cols=188 Identities=29% Similarity=0.462 Sum_probs=137.5
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhCC-------HHHHHHHHHHHHHHHHHHHHCCCeeccCCCCc
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIINS-------NPALRYIMRQLFEALEHVHNHSVVHRDLKPEN 76 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~~-------~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~N 76 (408)
.+.|+|++ .+.. ...+..++|+||+.+|. |.+.+.. ......++.||+.||.|||+++|+|++|++.|
T Consensus 57 ~l~h~ni~-~~~g~~~~~~~~~lv~e~~~~g~--L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~n 133 (259)
T PF07714_consen 57 KLRHPNIV-KLYGFCIENEPLFLVMEYCPGGS--LDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSN 133 (259)
T ss_dssp THSBTTBE--EEEEEESSSSEEEEEE--TTEB--HHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGG
T ss_pred cccccccc-ccccccccccccccccccccccc--cccccccccccccccccccccccccccccccccccccccccccccc
Confidence 35899866 4443 23445789999999997 7766533 37788899999999999999999999999999
Q ss_pred EEEecCCCEEEeccccchhcccCccc---ccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHh-CCCCCC
Q psy3880 77 ILLDDQMNVKLTDFGFARVLKKGEKL---MDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPFW 152 (408)
Q Consensus 77 ILl~~~~~iKl~DFGla~~~~~~~~~---~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~-G~~pf~ 152 (408)
||+++++.+||+|||++......... ....+...|+|||.+... .++.++||||||+++||+++ |..||.
T Consensus 134 ill~~~~~~Kl~~f~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~------~~~~ksDVysfG~~l~ei~~~~~~p~~ 207 (259)
T PF07714_consen 134 ILLDSNGQVKLSDFGLSRPISEKSKYKNDSSQQLPLRYLAPEVLKDG------EYTKKSDVYSFGMLLYEILTLGKFPFS 207 (259)
T ss_dssp EEEETTTEEEEESTTTGEETTTSSSEEESTTSESGGGGS-HHHHHHS------EESHHHHHHHHHHHHHHHHTTSSGTTT
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccc------ccccccccccccccccccccccccccc
Confidence 99999999999999998776322211 224456789999998763 36889999999999999999 778887
Q ss_pred CchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHH
Q psy3880 153 HRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRN 232 (408)
Q Consensus 153 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~ 232 (408)
+.+..+...++..+..
T Consensus 208 ~~~~~~~~~~~~~~~~---------------------------------------------------------------- 223 (259)
T PF07714_consen 208 DYDNEEIIEKLKQGQR---------------------------------------------------------------- 223 (259)
T ss_dssp TSCHHHHHHHHHTTEE----------------------------------------------------------------
T ss_pred cccccccccccccccc----------------------------------------------------------------
Confidence 6655554444432211
Q ss_pred HHhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHc
Q psy3880 233 IMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALN 275 (408)
Q Consensus 233 i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~ 275 (408)
.. .-...+.+..++|.+|+..||++|||+.++++
T Consensus 224 -------~~--~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~ 257 (259)
T PF07714_consen 224 -------LP--IPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQ 257 (259)
T ss_dssp -------TT--SBTTSBHHHHHHHHHHT-SSGGGS--HHHHHH
T ss_pred -------ce--eccchhHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 00 01245778999999999999999999999875
No 381
>KOG0194|consensus
Probab=99.93 E-value=1.2e-26 Score=233.66 Aligned_cols=189 Identities=23% Similarity=0.365 Sum_probs=147.1
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhCCH------HHHHHHHHHHHHHHHHHHHCCCeeccCCCCcE
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIINSN------PALRYIMRQLFEALEHVHNHSVVHRDLKPENI 77 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~~~------~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NI 77 (408)
++.|+| ||+++. ..+...|||||+|.||. |.+++... .+-..++.+.+.||+|||++++|||||...|+
T Consensus 217 ~l~H~N-VVr~yGVa~~~~Pl~ivmEl~~gGs--L~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNc 293 (474)
T KOG0194|consen 217 QLNHPN-VVRFYGVAVLEEPLMLVMELCNGGS--LDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNC 293 (474)
T ss_pred hCCCCC-EEEEEEEEcCCCccEEEEEecCCCc--HHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHh
Confidence 489998 568886 66678899999999998 99998653 56677889999999999999999999999999
Q ss_pred EEecCCCEEEeccccchhcccCcccccCC-CCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHh-CCCCCCCch
Q psy3880 78 LLDDQMNVKLTDFGFARVLKKGEKLMDLC-GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPFWHRK 155 (408)
Q Consensus 78 Ll~~~~~iKl~DFGla~~~~~~~~~~~~~-gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~-G~~pf~~~~ 155 (408)
|++.++.+||+|||+++.-..-......+ -...|+|||.+.. .-|+.++||||+||++||+++ |..||.+..
T Consensus 294 L~~~~~~vKISDFGLs~~~~~~~~~~~~~klPirWLAPEtl~~------~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~ 367 (474)
T KOG0194|consen 294 LYSKKGVVKISDFGLSRAGSQYVMKKFLKKLPIRWLAPETLNT------GIFSFKTDVWSFGVLLWEIFENGAEPYPGMK 367 (474)
T ss_pred eecCCCeEEeCccccccCCcceeeccccccCcceecChhhhcc------CccccccchhheeeeEEeeeccCCCCCCCCC
Confidence 99999999999999987543111111122 2347999999974 368899999999999999997 788887776
Q ss_pred hHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHh
Q psy3880 156 QMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIME 235 (408)
Q Consensus 156 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~ 235 (408)
..+...+|....
T Consensus 368 ~~~v~~kI~~~~-------------------------------------------------------------------- 379 (474)
T KOG0194|consen 368 NYEVKAKIVKNG-------------------------------------------------------------------- 379 (474)
T ss_pred HHHHHHHHHhcC--------------------------------------------------------------------
Confidence 666555553322
Q ss_pred cCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHc
Q psy3880 236 GKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALN 275 (408)
Q Consensus 236 ~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~ 275 (408)
+..+.+ ...+++...++.+|...||++|+|+.++.+
T Consensus 380 --~r~~~~--~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~ 415 (474)
T KOG0194|consen 380 --YRMPIP--SKTPKELAKVMKQCWKKDPEDRPTMSTIKK 415 (474)
T ss_pred --ccCCCC--CCCHHHHHHHHHHhccCChhhccCHHHHHH
Confidence 222211 134667788999999999999999887754
No 382
>KOG1026|consensus
Probab=99.93 E-value=4.8e-26 Score=236.94 Aligned_cols=186 Identities=23% Similarity=0.443 Sum_probs=151.9
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhCC-------------------HHHHHHHHHHHHHHHHHHHH
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIINS-------------------NPALRYIMRQLFEALEHVHN 64 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~~-------------------~~~~r~i~~qil~aL~~LH~ 64 (408)
.+.|+| ||++.. ..++..++|||||..|+ |-++|.. ..+...|+.||+.|++||-+
T Consensus 545 ~l~H~n-IVrLlGVC~~~~P~~MvFEYm~~GD--L~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~ 621 (774)
T KOG1026|consen 545 ELQHPN-IVRLLGVCREGDPLCMVFEYMDHGD--LHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSS 621 (774)
T ss_pred hccCCC-eEEEEEEEccCCeeEEEEEeccccc--HHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 478998 557665 56678999999999999 8777642 25778899999999999999
Q ss_pred CCCeeccCCCCcEEEecCCCEEEeccccchhcccCcccccCCCC---CcccChhhhhhccccCcCCCCcchhhhhhhHHH
Q psy3880 65 HSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGT---PGYLAPEVLRANMFEDATGYGQAVDVWACGVIM 141 (408)
Q Consensus 65 ~~IvHRDLKp~NILl~~~~~iKl~DFGla~~~~~~~~~~~~~gt---~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil 141 (408)
+.+|||||...|+|+.++..|||+|||+++..-..+.......| ..|||||.|..+ .|+++|||||+||++
T Consensus 622 ~~FVHRDLATRNCLVge~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~------kFTteSDVWs~GVvL 695 (774)
T KOG1026|consen 622 HHFVHRDLATRNCLVGENLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYG------KFTTESDVWSFGVVL 695 (774)
T ss_pred CcccccchhhhhceeccceEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcC------cccchhhhhhhhhhh
Confidence 99999999999999999999999999999876544433222122 479999999864 578999999999999
Q ss_pred HHHHh-CCCCCCCchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCC
Q psy3880 142 YTLLV-GCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPP 220 (408)
Q Consensus 142 ~~ll~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~P 220 (408)
||+++ |..|+.+.+.++.+..|.+|..
T Consensus 696 WEIFsyG~QPy~glSn~EVIe~i~~g~l---------------------------------------------------- 723 (774)
T KOG1026|consen 696 WEIFSYGKQPYYGLSNQEVIECIRAGQL---------------------------------------------------- 723 (774)
T ss_pred hhhhccccCcccccchHHHHHHHHcCCc----------------------------------------------------
Confidence 99996 8888888888887777766542
Q ss_pred CCCchhHHHHHHHHhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHH
Q psy3880 221 FWHRKQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEA 273 (408)
Q Consensus 221 f~~~~~~~~~~~i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~ 273 (408)
.+-| .+.+.++.+|+..|.+.+|++|||..|+
T Consensus 724 -------------------L~~P--e~CP~~vY~LM~~CW~~~P~~RPsF~eI 755 (774)
T KOG1026|consen 724 -------------------LSCP--ENCPTEVYSLMLECWNENPKRRPSFKEI 755 (774)
T ss_pred -------------------ccCC--CCCCHHHHHHHHHHhhcCcccCCCHHHH
Confidence 1111 2567889999999999999999998886
No 383
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=99.92 E-value=1.6e-25 Score=213.63 Aligned_cols=139 Identities=27% Similarity=0.464 Sum_probs=110.9
Q ss_pred ccccCCcEEEEec----cCCcHHHHHHHHHhhchhhHHhhhC------CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCC
Q psy3880 6 MVAHSRVVVRVKE----EGDDLKHLAAQVVDKGEAAVQDIIN------SNPALRYIMRQLFEALEHVHNHSVVHRDLKPE 75 (408)
Q Consensus 6 ~~~~~~~i~~~~~----~~~~~~~lv~e~~~~g~~~l~~~~~------~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~ 75 (408)
.+.|++++ .+.. .+....++||||+.+|. |.+++. +...+..++.|++.||+|||++||+||||||+
T Consensus 62 ~l~~~~i~-~~~~~~~~~~~~~~~lv~e~~~~~~--l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ 138 (284)
T cd05038 62 TLDHENIV-KYKGVCEKPGGRSLRLIMEYLPSGS--LRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAAR 138 (284)
T ss_pred hCCCCChh-eEEeeeecCCCCceEEEEecCCCCC--HHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHH
Confidence 46788865 4432 23457899999999998 777763 34678899999999999999999999999999
Q ss_pred cEEEecCCCEEEeccccchhcccCccc----ccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCC
Q psy3880 76 NILLDDQMNVKLTDFGFARVLKKGEKL----MDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151 (408)
Q Consensus 76 NILl~~~~~iKl~DFGla~~~~~~~~~----~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf 151 (408)
||+++.++.++|+|||++......... ....++..|+|||.+.. ..++.++|+||+||++++|++|..||
T Consensus 139 nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~------~~~~~~~Di~slG~~l~el~tg~~p~ 212 (284)
T cd05038 139 NILVESEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRT------SKFSSASDVWSFGVTLYELFTYGDPS 212 (284)
T ss_pred hEEEcCCCCEEEcccccccccccCCcceeccCCCCCcccccCcHHHcc------CCCCcccchHHHhhhhheeeccCCCc
Confidence 999999999999999999876532211 11234557999998864 34678899999999999999999887
Q ss_pred CC
Q psy3880 152 WH 153 (408)
Q Consensus 152 ~~ 153 (408)
..
T Consensus 213 ~~ 214 (284)
T cd05038 213 QS 214 (284)
T ss_pred cc
Confidence 44
No 384
>KOG1006|consensus
Probab=99.92 E-value=3.2e-26 Score=210.08 Aligned_cols=200 Identities=25% Similarity=0.370 Sum_probs=146.2
Q ss_pred CcEEEEecc-C-CcHHHHHHHHHhhchhhHHhhhC-------CHHHHHHHHHHHHHHHHHHH-HCCCeeccCCCCcEEEe
Q psy3880 11 RVVVRVKEE-G-DDLKHLAAQVVDKGEAAVQDIIN-------SNPALRYIMRQLFEALEHVH-NHSVVHRDLKPENILLD 80 (408)
Q Consensus 11 ~~i~~~~~~-~-~~~~~lv~e~~~~g~~~l~~~~~-------~~~~~r~i~~qil~aL~~LH-~~~IvHRDLKp~NILl~ 80 (408)
++||+++.. + ....++.||+|+---..|+.++- .+.-+-.+....+.||.||- ...|||||+||+|||++
T Consensus 123 p~IVkfyGa~F~EGdcWiCMELMd~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILld 202 (361)
T KOG1006|consen 123 PNIVKFYGALFSEGDCWICMELMDISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLD 202 (361)
T ss_pred cHHHHHhhhhhcCCceeeeHHHHhhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEe
Confidence 345555531 1 12346788888765433444332 23445556666789999997 46899999999999999
Q ss_pred cCCCEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchh-HHH
Q psy3880 81 DQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQ-MVM 159 (408)
Q Consensus 81 ~~~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~-~~~ 159 (408)
..|.+||||||++..+..+-..+.-.|...|||||.+..+ ..+|+-++|+||||+++||+.||..|+..-+. .++
T Consensus 203 r~G~vKLCDFGIcGqLv~SiAkT~daGCrpYmAPERi~p~----~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeq 278 (361)
T KOG1006|consen 203 RHGDVKLCDFGICGQLVDSIAKTVDAGCRPYMAPERIDPS----DKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQ 278 (361)
T ss_pred cCCCEeeecccchHhHHHHHHhhhccCCccccChhccCCc----cCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHH
Confidence 9999999999999888766544556788999999998643 34799999999999999999999999865432 233
Q ss_pred HHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCCC
Q psy3880 160 LRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYS 239 (408)
Q Consensus 160 ~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~~ 239 (408)
+..+ ..|.||-...+
T Consensus 279 l~~V---------------------------------------------------v~gdpp~l~~~-------------- 293 (361)
T KOG1006|consen 279 LCQV---------------------------------------------------VIGDPPILLFD-------------- 293 (361)
T ss_pred HHHH---------------------------------------------------HcCCCCeecCc--------------
Confidence 3332 23444421110
Q ss_pred CCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q psy3880 240 FSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPK 282 (408)
Q Consensus 240 f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~ 282 (408)
.+--+.|...+.+|.-||.+|-.+||+-.+++.|||+...
T Consensus 294 ---~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~~fyr~y 333 (361)
T KOG1006|consen 294 ---KECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKFPFYRMY 333 (361)
T ss_pred ---ccccccCHHHHHHHHHHhhcccccCcchhhhhcCchhhhh
Confidence 1112468899999999999999999999999999999765
No 385
>KOG4250|consensus
Probab=99.92 E-value=9.6e-26 Score=230.17 Aligned_cols=142 Identities=34% Similarity=0.563 Sum_probs=120.9
Q ss_pred cccCCcEEEEeccCCc-------HHHHHHHHHhhchhhHHhhhCCH--------HHHHHHHHHHHHHHHHHHHCCCeecc
Q psy3880 7 VAHSRVVVRVKEEGDD-------LKHLAAQVVDKGEAAVQDIINSN--------PALRYIMRQLFEALEHVHNHSVVHRD 71 (408)
Q Consensus 7 ~~~~~~i~~~~~~~~~-------~~~lv~e~~~~g~~~l~~~~~~~--------~~~r~i~~qil~aL~~LH~~~IvHRD 71 (408)
|.|+|+|.-+.-++++ ...+|||||.||+ |...+.+. .++..++..+..||.|||.+||||||
T Consensus 68 Lnh~NIVk~f~iee~~~~~~~~~~~vlvmEyC~gGs--L~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRD 145 (732)
T KOG4250|consen 68 LNHPNIVKLFDIEETKFLGLVTRLPVLVMEYCSGGS--LRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRD 145 (732)
T ss_pred cCchhhhhhcccCCccccCcccccceEEEeecCCCc--HHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceecc
Confidence 6699876544433333 3568999999999 99988753 68899999999999999999999999
Q ss_pred CCCCcEEEe--cCC--CEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhC
Q psy3880 72 LKPENILLD--DQM--NVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVG 147 (408)
Q Consensus 72 LKp~NILl~--~~~--~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G 147 (408)
|||.||++. .+| --||+|||.|+.+.+++...+.+||+.|++||+...+ ..|+..+|.||+||++|+.+||
T Consensus 146 lKP~NIvl~~Gedgq~IyKLtDfG~Arel~d~s~~~S~vGT~~YLhPel~E~q-----~~y~~tVDLWS~GvtlY~caTG 220 (732)
T KOG4250|consen 146 LKPGNIVLQIGEDGQSIYKLTDFGAARELDDNSLFTSLVGTEEYLHPELYERQ-----KKYTATVDLWSFGVTLYECATG 220 (732)
T ss_pred CCCCcEEEeecCCCceEEeeecccccccCCCCCeeeeecCchhhcChHHHhhc-----cCcCceeehhhhhhHHHHHhcc
Confidence 999999984 334 3599999999999999988899999999999998642 4688999999999999999999
Q ss_pred CCCCCCch
Q psy3880 148 CPPFWHRK 155 (408)
Q Consensus 148 ~~pf~~~~ 155 (408)
..||...-
T Consensus 221 ~lPF~p~~ 228 (732)
T KOG4250|consen 221 ELPFIPFG 228 (732)
T ss_pred CCCCCcCC
Confidence 99996543
No 386
>KOG1095|consensus
Probab=99.91 E-value=1e-24 Score=234.22 Aligned_cols=187 Identities=22% Similarity=0.414 Sum_probs=148.0
Q ss_pred cccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhCCH------------HHHHHHHHHHHHHHHHHHHCCCeeccC
Q psy3880 7 VAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIINSN------------PALRYIMRQLFEALEHVHNHSVVHRDL 72 (408)
Q Consensus 7 ~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~~~------------~~~r~i~~qil~aL~~LH~~~IvHRDL 72 (408)
++|+|+| .+.. -.....+|++|||.||+ |..+|.+. .++..++.||++|++||++++.|||||
T Consensus 752 f~HpNiv-~liGv~l~~~~~~i~leyM~gGD--L~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDL 828 (1025)
T KOG1095|consen 752 FDHPNIV-SLIGVCLDSGPPLILLEYMEGGD--LLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDL 828 (1025)
T ss_pred CCCccee-eEEEeecCCCCcEEEehhcccCc--HHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcch
Confidence 6899965 4443 22456789999999999 98887543 688899999999999999999999999
Q ss_pred CCCcEEEecCCCEEEeccccchhcccCccccc-CCCC--CcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHh-CC
Q psy3880 73 KPENILLDDQMNVKLTDFGFARVLKKGEKLMD-LCGT--PGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GC 148 (408)
Q Consensus 73 Kp~NILl~~~~~iKl~DFGla~~~~~~~~~~~-~~gt--~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~-G~ 148 (408)
...|+|++....+||+|||+|+.+...+.... -.+. ..|||||.+... .|+.++|||||||++||+++ |.
T Consensus 829 AaRNCLL~~~r~VKIaDFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~------iFtskSDvWsFGVllWEifslG~ 902 (1025)
T KOG1095|consen 829 AARNCLLDERRVVKIADFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDG------IFTSKSDVWSFGVLLWEIFSLGA 902 (1025)
T ss_pred hhhheeecccCcEEEcccchhHhhhhchheeccCccccceecCCHHHHhhc------ccccccchhhhHHHHHHHHhCCC
Confidence 99999999999999999999995544332221 1122 379999999863 46899999999999999997 88
Q ss_pred CCCCCchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHH
Q psy3880 149 PPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMV 228 (408)
Q Consensus 149 ~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~ 228 (408)
.||.+.+..+.+..+++|. +...|
T Consensus 903 ~PY~~~~n~~v~~~~~~gg-RL~~P------------------------------------------------------- 926 (1025)
T KOG1095|consen 903 TPYPSRSNFEVLLDVLEGG-RLDPP------------------------------------------------------- 926 (1025)
T ss_pred CCCCCcchHHHHHHHHhCC-ccCCC-------------------------------------------------------
Confidence 8888877766665554442 22211
Q ss_pred HHHHHHhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHc
Q psy3880 229 MLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALN 275 (408)
Q Consensus 229 ~~~~i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~ 275 (408)
...++...+++..|+.-||++||+...+++
T Consensus 927 -----------------~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~ 956 (1025)
T KOG1095|consen 927 -----------------SYCPEKLYQLMLQCWKHDPEDRPSFRTIVE 956 (1025)
T ss_pred -----------------CCCChHHHHHHHHHccCChhhCccHHHHHh
Confidence 235667789999999999999999999987
No 387
>KOG0590|consensus
Probab=99.91 E-value=1.7e-25 Score=234.98 Aligned_cols=203 Identities=23% Similarity=0.413 Sum_probs=143.4
Q ss_pred ccccccccCCcEEEEec-cCCcHHHHHHHHHhhchhhHHhhhCCH-----HHHHHHHHHHHHHHHHHHHCCCeeccCCCC
Q psy3880 2 EKGEMVAHSRVVVRVKE-EGDDLKHLAAQVVDKGEAAVQDIINSN-----PALRYIMRQLFEALEHVHNHSVVHRDLKPE 75 (408)
Q Consensus 2 ~~~~~~~~~~~i~~~~~-~~~~~~~lv~e~~~~g~~~l~~~~~~~-----~~~r~i~~qil~aL~~LH~~~IvHRDLKp~ 75 (408)
.++..+.|++++-.+.- ...+..+-+||||.+ + |+..+.+. .++..+++|++.||+|+|++||.|||+||+
T Consensus 373 ~i~~~l~h~~~~e~l~~~~~~~~~~~~mE~~~~-D--lf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~e 449 (601)
T KOG0590|consen 373 CIGSSLSHPNIIETLDIVQEIDGILQSMEYCPY-D--LFSLVMSNGKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLE 449 (601)
T ss_pred eecccccCCchhhhHHHHhhcccchhhhhcccH-H--HHHHHhcccccchhhhhHHHHHHHHHHHHHHhcCceeccCccc
Confidence 35778899986533222 122233344999999 8 88888763 789999999999999999999999999999
Q ss_pred cEEEecCCCEEEeccccchhcccC-----cccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCC
Q psy3880 76 NILLDDQMNVKLTDFGFARVLKKG-----EKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPP 150 (408)
Q Consensus 76 NILl~~~~~iKl~DFGla~~~~~~-----~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~p 150 (408)
|+++..+|.+||+|||.+...... ......+|+..|+|||++....++ ...+||||+|++++.|.+|+.|
T Consensus 450 nll~~~~g~lki~Dfg~~~vf~~~~e~~~~~~~g~~gS~pY~apE~~~~~~yd-----pr~vDiwS~~ii~~~m~~~~~~ 524 (601)
T KOG0590|consen 450 NLLVTENGILKIIDFGAASVFRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYD-----PRAVDVWSCGIIYICMILGRFP 524 (601)
T ss_pred cEEEecCCceEEeecCcceeeccCcchhhhhhcCcccCCcCcCcccccccccC-----cchhhhhhccceEEEEecCCCc
Confidence 999999999999999998765432 123468999999999998754322 2345555555555555555555
Q ss_pred CCCchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHH
Q psy3880 151 FWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVML 230 (408)
Q Consensus 151 f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~ 230 (408)
|.- ..+.+..
T Consensus 525 Wk~----------------------------------------------------------------------a~~~~~~ 534 (601)
T KOG0590|consen 525 WKV----------------------------------------------------------------------AKKSDNS 534 (601)
T ss_pred ccc----------------------------------------------------------------------ccccccc
Confidence 532 2111100
Q ss_pred -HHHH--hc--CCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q psy3880 231 -RNIM--EG--KYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPK 282 (408)
Q Consensus 231 -~~i~--~~--~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~ 282 (408)
.... .. ...-+..-|..++.+.+.+|.+||++||.+|+|++++++.+||+..
T Consensus 535 ~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~~i 591 (601)
T KOG0590|consen 535 FKTNNYSDQRNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILNDEWIRSI 591 (601)
T ss_pred hhhhccccccccccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhhChHhhhc
Confidence 0000 00 0001112356788899999999999999999999999999999764
No 388
>KOG4257|consensus
Probab=99.91 E-value=6e-25 Score=220.68 Aligned_cols=151 Identities=27% Similarity=0.471 Sum_probs=124.9
Q ss_pred cccCCcEEEEec-cCCcHHHHHHHHHhhchhhHHhhhCCH------HHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEE
Q psy3880 7 VAHSRVVVRVKE-EGDDLKHLAAQVVDKGEAAVQDIINSN------PALRYIMRQLFEALEHVHNHSVVHRDLKPENILL 79 (408)
Q Consensus 7 ~~~~~~i~~~~~-~~~~~~~lv~e~~~~g~~~l~~~~~~~------~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl 79 (408)
++||++| ++.. -.+....||||++.-|| |..++..+ ..+..|+.||+.||.|||+.+.|||||...|||+
T Consensus 448 fdHphIi-kLIGv~~e~P~WivmEL~~~GE--Lr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLV 524 (974)
T KOG4257|consen 448 FDHPHII-KLIGVCVEQPMWIVMELAPLGE--LREYLQQNKDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILV 524 (974)
T ss_pred CCCcchh-heeeeeeccceeEEEecccchh--HHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheee
Confidence 6899866 4443 44557899999999999 98888644 5778899999999999999999999999999999
Q ss_pred ecCCCEEEeccccchhcccCcccccCCCCC--cccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHh-CCCCCCCchh
Q psy3880 80 DDQMNVKLTDFGFARVLKKGEKLMDLCGTP--GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPFWHRKQ 156 (408)
Q Consensus 80 ~~~~~iKl~DFGla~~~~~~~~~~~~~gt~--~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~-G~~pf~~~~~ 156 (408)
.+...+||+|||+++.+.+........|.. .|||||.+.. ..++.++|||-|||++||++. |..||.+-..
T Consensus 525 sSp~CVKLaDFGLSR~~ed~~yYkaS~~kLPIKWmaPESINf------RrFTtASDVWMFgVCmWEIl~lGvkPfqgvkN 598 (974)
T KOG4257|consen 525 SSPQCVKLADFGLSRYLEDDAYYKASRGKLPIKWMAPESINF------RRFTTASDVWMFGVCMWEILSLGVKPFQGVKN 598 (974)
T ss_pred cCcceeeecccchhhhccccchhhccccccceeecCccccch------hcccchhhHHHHHHHHHHHHHhcCCccccccc
Confidence 999999999999999998776655544543 6999999865 457889999999999999985 9999988766
Q ss_pred HHHHHHHHhc
Q psy3880 157 MVMLRNIMEG 166 (408)
Q Consensus 157 ~~~~~~i~~~ 166 (408)
.+.+..|..|
T Consensus 599 sDVI~~iEnG 608 (974)
T KOG4257|consen 599 SDVIGHIENG 608 (974)
T ss_pred cceEEEecCC
Confidence 5555555444
No 389
>KOG1187|consensus
Probab=99.90 E-value=1.5e-24 Score=215.48 Aligned_cols=140 Identities=27% Similarity=0.428 Sum_probs=113.2
Q ss_pred ccccCCcEEEEec-cCCc-HHHHHHHHHhhchhhHHhhhCCH-------HHHHHHHHHHHHHHHHHHHCC---CeeccCC
Q psy3880 6 MVAHSRVVVRVKE-EGDD-LKHLAAQVVDKGEAAVQDIINSN-------PALRYIMRQLFEALEHVHNHS---VVHRDLK 73 (408)
Q Consensus 6 ~~~~~~~i~~~~~-~~~~-~~~lv~e~~~~g~~~l~~~~~~~-------~~~r~i~~qil~aL~~LH~~~---IvHRDLK 73 (408)
++.|+|+|.-+-. .+.+ ...||+||+..|. |.+++... ..-..|+.+++.||+|||... |||||||
T Consensus 127 ~l~H~Nlv~LlGyC~e~~~~~~LVYEym~nGs--L~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiK 204 (361)
T KOG1187|consen 127 RLRHPNLVKLLGYCLEGGEHRLLVYEYMPNGS--LEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIK 204 (361)
T ss_pred cCCCcCcccEEEEEecCCceEEEEEEccCCCC--HHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCC
Confidence 5679986633333 3333 4799999999998 98887543 456789999999999999854 9999999
Q ss_pred CCcEEEecCCCEEEeccccchhccc-CcccccC-CCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCC
Q psy3880 74 PENILLDDQMNVKLTDFGFARVLKK-GEKLMDL-CGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151 (408)
Q Consensus 74 p~NILl~~~~~iKl~DFGla~~~~~-~~~~~~~-~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf 151 (408)
|+|||+|++.+.||+|||+|+.... .....+. .||.+|+|||++.. ...+.++|||||||++.|+++|+.|.
T Consensus 205 ssNILLD~~~~aKlsDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~------g~lt~KsDVySFGVvllElitgr~~~ 278 (361)
T KOG1187|consen 205 SSNILLDEDFNAKLSDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYAST------GKLTEKSDVYSFGVVLLELITGRKAV 278 (361)
T ss_pred HHHeeECCCCCEEccCccCcccCCccccceeeecCCCCccCChhhhcc------CCcCcccccccchHHHHHHHhCCccc
Confidence 9999999999999999999965543 3333333 89999999999864 23578999999999999999999877
Q ss_pred CC
Q psy3880 152 WH 153 (408)
Q Consensus 152 ~~ 153 (408)
..
T Consensus 279 d~ 280 (361)
T KOG1187|consen 279 DQ 280 (361)
T ss_pred CC
Confidence 54
No 390
>KOG0196|consensus
Probab=99.90 E-value=2.6e-24 Score=220.91 Aligned_cols=189 Identities=22% Similarity=0.451 Sum_probs=150.2
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhCCH------HHHHHHHHHHHHHHHHHHHCCCeeccCCCCcE
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIINSN------PALRYIMRQLFEALEHVHNHSVVHRDLKPENI 77 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~~~------~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NI 77 (408)
+.+|||+| ++.. +-.....||.|||+.|. |-.+|... -++..+++.|+.|++||-++|+|||||.+.||
T Consensus 686 QFdHPNII-rLEGVVTks~PvMIiTEyMENGs--LDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNI 762 (996)
T KOG0196|consen 686 QFDHPNII-RLEGVVTKSKPVMIITEYMENGS--LDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNI 762 (996)
T ss_pred cCCCCcEE-EEEEEEecCceeEEEhhhhhCCc--HHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhhe
Confidence 47899855 7776 33455689999999998 65555332 57888999999999999999999999999999
Q ss_pred EEecCCCEEEeccccchhcccCc-c-cccCCCC--CcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHh-CCCCCC
Q psy3880 78 LLDDQMNVKLTDFGFARVLKKGE-K-LMDLCGT--PGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPFW 152 (408)
Q Consensus 78 Ll~~~~~iKl~DFGla~~~~~~~-~-~~~~~gt--~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~-G~~pf~ 152 (408)
|++.+..||++|||+++.+.++. . ..+..|. ..|.|||.|.. ..++.++||||+||++||.++ |..|++
T Consensus 763 LVNsnLvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~------RKFTsASDVWSyGIVmWEVmSyGERPYW 836 (996)
T KOG0196|consen 763 LVNSNLVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAY------RKFTSASDVWSYGIVMWEVMSYGERPYW 836 (996)
T ss_pred eeccceEEEeccccceeecccCCCccccccCCccceeecChhHhhh------cccCchhhccccceEEEEecccCCCccc
Confidence 99999999999999999886554 2 2223333 37999999975 457889999999999999774 888988
Q ss_pred CchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHH
Q psy3880 153 HRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRN 232 (408)
Q Consensus 153 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~ 232 (408)
+.+.++.+..|.+|.
T Consensus 837 dmSNQdVIkaIe~gy----------------------------------------------------------------- 851 (996)
T KOG0196|consen 837 DMSNQDVIKAIEQGY----------------------------------------------------------------- 851 (996)
T ss_pred ccchHHHHHHHHhcc-----------------------------------------------------------------
Confidence 888888888877652
Q ss_pred HHhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcC
Q psy3880 233 IMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNH 276 (408)
Q Consensus 233 i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~H 276 (408)
..+.| .+.+..+..|+..|.++|-++||+..|++++
T Consensus 852 ------RLPpP--mDCP~aL~qLMldCWqkdR~~RP~F~qiV~~ 887 (996)
T KOG0196|consen 852 ------RLPPP--MDCPAALYQLMLDCWQKDRNRRPKFAQIVST 887 (996)
T ss_pred ------CCCCC--CCCcHHHHHHHHHHHHHHhhcCCCHHHHHHH
Confidence 11111 2456677889999999999999998887663
No 391
>KOG0984|consensus
Probab=99.89 E-value=1.1e-23 Score=187.23 Aligned_cols=156 Identities=25% Similarity=0.397 Sum_probs=122.2
Q ss_pred ccCCcEEEEecc--CCcHHHHHHHHHhhchhhHHhh------hCCHHHHHHHHHHHHHHHHHHHH-CCCeeccCCCCcEE
Q psy3880 8 AHSRVVVRVKEE--GDDLKHLAAQVVDKGEAAVQDI------INSNPALRYIMRQLFEALEHVHN-HSVVHRDLKPENIL 78 (408)
Q Consensus 8 ~~~~~i~~~~~~--~~~~~~lv~e~~~~g~~~l~~~------~~~~~~~r~i~~qil~aL~~LH~-~~IvHRDLKp~NIL 78 (408)
+.++++|+++.. .....++.||.|+--...+... ...+.-+-.++-.++.||.|||+ ..|||||+||+|||
T Consensus 102 ~~CPf~V~FyGa~~regdvwIcME~M~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiL 181 (282)
T KOG0984|consen 102 VDCPFTVHFYGALFREGDVWICMELMDTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNIL 181 (282)
T ss_pred CCCCeEEEeehhhhccccEEEeHHHhhhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEE
Confidence 356788898852 2234678899887543223222 22446677888899999999997 47999999999999
Q ss_pred EecCCCEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCC-chhH
Q psy3880 79 LDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH-RKQM 157 (408)
Q Consensus 79 l~~~~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~-~~~~ 157 (408)
++.+|++|+||||.+..+.++-..+--.|...|||||.+..+. +..+|+.++||||||+++.||.+++.|+.. .+..
T Consensus 182 In~~GqVKiCDFGIsG~L~dSiAkt~daGCkpYmaPEri~~e~--n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF 259 (282)
T KOG0984|consen 182 INYDGQVKICDFGISGYLVDSIAKTMDAGCKPYMAPERINPEL--NQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPF 259 (282)
T ss_pred EccCCcEEEcccccceeehhhhHHHHhcCCCccCChhhcCccc--CcccceeehhhhhhhhhhhhhhhccccccccCCHH
Confidence 9999999999999999887765444467888999999987543 234899999999999999999999999965 4567
Q ss_pred HHHHHHHh
Q psy3880 158 VMLRNIME 165 (408)
Q Consensus 158 ~~~~~i~~ 165 (408)
+++.++.+
T Consensus 260 ~qLkqvVe 267 (282)
T KOG0984|consen 260 QQLKQVVE 267 (282)
T ss_pred HHHHHHhc
Confidence 77777765
No 392
>KOG0199|consensus
Probab=99.89 E-value=8.3e-23 Score=207.61 Aligned_cols=186 Identities=25% Similarity=0.421 Sum_probs=150.3
Q ss_pred cccCCcEEEEecc-CCcHHHHHHHHHhhchhhHHhhhCCH-------HHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEE
Q psy3880 7 VAHSRVVVRVKEE-GDDLKHLAAQVVDKGEAAVQDIINSN-------PALRYIMRQLFEALEHVHNHSVVHRDLKPENIL 78 (408)
Q Consensus 7 ~~~~~~i~~~~~~-~~~~~~lv~e~~~~g~~~l~~~~~~~-------~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NIL 78 (408)
|.|+++| +++.- -+...-+|||++..|. |.+.+... ..+..|+.||+.|+.||.+++.|||||...|+|
T Consensus 168 L~H~hli-RLyGvVl~qp~mMV~ELaplGS--LldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNll 244 (1039)
T KOG0199|consen 168 LQHPHLI-RLYGVVLDQPAMMVFELAPLGS--LLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLL 244 (1039)
T ss_pred ccCccee-EEeeeeccchhhHHhhhcccch--HHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhe
Confidence 6899855 77764 3356789999999999 99988652 577899999999999999999999999999999
Q ss_pred EecCCCEEEeccccchhcccCcccccCCC----CCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHh-CCCCCCC
Q psy3880 79 LDDQMNVKLTDFGFARVLKKGEKLMDLCG----TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPFWH 153 (408)
Q Consensus 79 l~~~~~iKl~DFGla~~~~~~~~~~~~~g----t~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~-G~~pf~~ 153 (408)
+.....|||+||||.+-+..++......+ ...|.|||.|.. ..|+.++|+|++||++|||++ |..||.+
T Consensus 245 lasprtVKI~DFGLmRaLg~ned~Yvm~p~rkvPfAWCaPEsLrh------~kFShaSDvWmyGVTiWEMFtyGEePW~G 318 (1039)
T KOG0199|consen 245 LASPRTVKICDFGLMRALGENEDMYVMAPQRKVPFAWCAPESLRH------RKFSHASDVWMYGVTIWEMFTYGEEPWVG 318 (1039)
T ss_pred ecccceeeeecccceeccCCCCcceEecCCCcCcccccCHhHhcc------ccccccchhhhhhhhHHhhhccCCCCCCC
Confidence 99988999999999998877665443222 236999999975 467899999999999999997 7778877
Q ss_pred chhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHH
Q psy3880 154 RKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI 233 (408)
Q Consensus 154 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i 233 (408)
.+..+++++|-.+.
T Consensus 319 ~~g~qIL~~iD~~e------------------------------------------------------------------ 332 (1039)
T KOG0199|consen 319 CRGIQILKNIDAGE------------------------------------------------------------------ 332 (1039)
T ss_pred CCHHHHHHhccccc------------------------------------------------------------------
Confidence 77766666664321
Q ss_pred HhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHH
Q psy3880 234 MEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEAL 274 (408)
Q Consensus 234 ~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L 274 (408)
..+. -+..|++..+++..|...+|++|||...+.
T Consensus 333 -----rLpR--Pk~csedIY~imk~cWah~paDRptFsair 366 (1039)
T KOG0199|consen 333 -----RLPR--PKYCSEDIYQIMKNCWAHNPADRPTFSAIR 366 (1039)
T ss_pred -----cCCC--CCCChHHHHHHHHHhccCCccccccHHHHH
Confidence 1111 134688899999999999999999987664
No 393
>KOG0576|consensus
Probab=99.89 E-value=5.6e-24 Score=215.41 Aligned_cols=200 Identities=28% Similarity=0.445 Sum_probs=154.0
Q ss_pred ccCCcEEEEec-cCCcHHHHHHHHHhhchhhHHhhh-----CCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEec
Q psy3880 8 AHSRVVVRVKE-EGDDLKHLAAQVVDKGEAAVQDII-----NSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDD 81 (408)
Q Consensus 8 ~~~~~i~~~~~-~~~~~~~lv~e~~~~g~~~l~~~~-----~~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl~~ 81 (408)
.|+|+|..+.. -.++...++||||.||. |+|+- .++.++.++.+..+.||+|||++|-+|||||-.|||+++
T Consensus 70 ~h~nivay~gsylr~dklwicMEycgggs--lQdiy~~TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd 147 (829)
T KOG0576|consen 70 RHPNIVAYFGSYLRRDKLWICMEYCGGGS--LQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTD 147 (829)
T ss_pred CCcChHHHHhhhhhhcCcEEEEEecCCCc--ccceeeecccchhHHHHHHHhhhhccchhhhcCCcccccccccceeecc
Confidence 58886644443 34566789999999998 88863 467899999999999999999999999999999999999
Q ss_pred CCCEEEeccccchhcccC-cccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHHHH
Q psy3880 82 QMNVKLTDFGFARVLKKG-EKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVML 160 (408)
Q Consensus 82 ~~~iKl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~~~ 160 (408)
.|.+|++|||.+..+... .+-.+..|||+|||||+-... ...+|+..||+|++|+...|+..-++|..+.-+...+
T Consensus 148 ~gDvklaDfgvsaqitati~KrksfiGtpywmapEvaave---rkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l 224 (829)
T KOG0576|consen 148 EGDVKLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVE---RKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRAL 224 (829)
T ss_pred cCceeecccCchhhhhhhhhhhhcccCCccccchhHHHHH---hcccccccccccccccchhhhhhcCCcccccchHHHH
Confidence 999999999998776532 233568999999999987543 3567889999999998888888777776554433322
Q ss_pred HHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCCCC
Q psy3880 161 RNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240 (408)
Q Consensus 161 ~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~~f 240 (408)
.... +..|..
T Consensus 225 ~LmT----------------------------------------------------------------------kS~~qp 234 (829)
T KOG0576|consen 225 FLMT----------------------------------------------------------------------KSGFQP 234 (829)
T ss_pred HHhh----------------------------------------------------------------------ccCCCC
Confidence 2221 111111
Q ss_pred CC-CcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q psy3880 241 SS-PEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPK 282 (408)
Q Consensus 241 ~~-~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~ 282 (408)
+. .+-..-|+...+|++.+|.++|++|||++.+|.|||.+..
T Consensus 235 p~lkDk~kws~~fh~fvK~altknpKkRptaeklL~h~fvs~~ 277 (829)
T KOG0576|consen 235 PTLKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQT 277 (829)
T ss_pred CcccCCccchHHHHHHHHHHhcCCCccCCChhhheeceeeccc
Confidence 10 1112347788999999999999999999999999999754
No 394
>KOG1290|consensus
Probab=99.88 E-value=3.5e-23 Score=203.45 Aligned_cols=140 Identities=21% Similarity=0.369 Sum_probs=86.4
Q ss_pred CCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCc------hhHHHHHHHHhccccCCCCCCccCCC
Q psy3880 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHR------KQMVMLRNIMEGKYSFSSPEWNDISG 180 (408)
Q Consensus 107 gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~------~~~~~~~~i~~~~~~~~~~~~~~~~~ 180 (408)
.|..|+|||++.+ .+|+..+||||++|+++||+||...|.-. .+.+-+..|++--.
T Consensus 413 QTRQYRapEVllG------sgY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rDEDHiA~i~ELLG------------ 474 (590)
T KOG1290|consen 413 QTRQYRAPEVLLG------SGYSTSADIWSTACMAFELATGDYLFEPHSGENYSRDEDHIALIMELLG------------ 474 (590)
T ss_pred hhhhccCcceeec------CCCCCchhHHHHHHHHHHhhcCceeecCCCCCCCCccHHHHHHHHHHHh------------
Confidence 4667999999986 57999999999999999999999999543 23455555544211
Q ss_pred CCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCCCCCCCcCCCCCccHHHHHHHhc
Q psy3880 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLL 260 (408)
Q Consensus 181 ~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~~f~~~~~~~iS~~~~dLI~klL 260 (408)
-|++-......+... -|....+ +.. ..+.-|| -+..++..+|.|+..+ ..+.-|||.-||
T Consensus 475 ~iPr~ia~~Gk~SRd-FFnr~G~------Lrh---I~~LK~W------pL~~VL~eKY~~s~e~----A~~fsdFL~PmL 534 (590)
T KOG1290|consen 475 KIPRKIALGGKYSRD-FFNRRGE------LRH---IRRLKPW------PLYEVLIEKYEWSEED----AQQFSDFLSPML 534 (590)
T ss_pred hccHHHHhcCcchHh-hhccccc------eec---ccccCCC------cHHHHHHHHhCCCHHH----HHHHHHHHHHHH
Confidence 111111111000000 0000000 000 0011111 1345666677775432 456679999999
Q ss_pred ccCCCCCCCHHHHHcCCCCCCCCC
Q psy3880 261 IVTPEDRYSVKEALNHSFFHPKLF 284 (408)
Q Consensus 261 ~~dP~~R~ta~e~L~Hpwf~~~~~ 284 (408)
+++|++|+||.++|+|||+.+...
T Consensus 535 ef~PeKR~tA~~cl~hPwLn~~~~ 558 (590)
T KOG1290|consen 535 EFDPEKRPTAAQCLKHPWLNPVAG 558 (590)
T ss_pred hcCccccccHHHHhcCccccCCCC
Confidence 999999999999999999987643
No 395
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.88 E-value=1.3e-23 Score=234.35 Aligned_cols=134 Identities=22% Similarity=0.362 Sum_probs=109.0
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhC--CHHHHHHHHHHHHHHHHHHH---HCCCeeccCCCCcEE
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN--SNPALRYIMRQLFEALEHVH---NHSVVHRDLKPENIL 78 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~--~~~~~r~i~~qil~aL~~LH---~~~IvHRDLKp~NIL 78 (408)
.+.|+|+| ++.+ ..++..|+||||+.+|. |.+.+. +..+...++.|++.||+||| +.+|+||||||+||+
T Consensus 739 ~l~HpnIv-~~~~~~~~~~~~~lv~Ey~~~g~--L~~~l~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil 815 (968)
T PLN00113 739 KLQHPNIV-KLIGLCRSEKGAYLIHEYIEGKN--LSEVLRNLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKII 815 (968)
T ss_pred hCCCCCcc-eEEEEEEcCCCCEEEEeCCCCCc--HHHHHhcCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEE
Confidence 46799855 5554 44567799999999999 888774 45788899999999999999 679999999999999
Q ss_pred EecCCCEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCC
Q psy3880 79 LDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFW 152 (408)
Q Consensus 79 l~~~~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~ 152 (408)
++.++..++. ||.+...... ....||+.|+|||++.. ..|+.++||||+||++|||++|+.||.
T Consensus 816 ~~~~~~~~~~-~~~~~~~~~~---~~~~~t~~y~aPE~~~~------~~~~~~sDv~S~Gvvl~el~tg~~p~~ 879 (968)
T PLN00113 816 IDGKDEPHLR-LSLPGLLCTD---TKCFISSAYVAPETRET------KDITEKSDIYGFGLILIELLTGKSPAD 879 (968)
T ss_pred ECCCCceEEE-eccccccccC---CCccccccccCcccccC------CCCCcccchhhHHHHHHHHHhCCCCCC
Confidence 9988887775 6655443221 23468899999998864 457889999999999999999999984
No 396
>KOG0603|consensus
Probab=99.87 E-value=1.4e-22 Score=205.33 Aligned_cols=183 Identities=29% Similarity=0.510 Sum_probs=146.1
Q ss_pred CcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhCCH-----HHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEecCC
Q psy3880 11 RVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIINSN-----PALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQM 83 (408)
Q Consensus 11 ~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~~~-----~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl~~~~ 83 (408)
.++|++.+ +.+...|+++++..||+ ++..+... ...+.+...++.|++++|+.+|+|||+|++||+++.+|
T Consensus 57 ~f~v~lhyafqt~~kl~l~ld~~rgg~--lft~l~~~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~G 134 (612)
T KOG0603|consen 57 PFLVKLHYAFQTDGKLYLILDFLRGGD--LFTRLSKEVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLEG 134 (612)
T ss_pred CceeeeeeeeccccchhHhhhhcccch--hhhccccCCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecccC
Confidence 35667665 56678899999999999 88877543 67888999999999999999999999999999999999
Q ss_pred CEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHHHHHHH
Q psy3880 84 NVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI 163 (408)
Q Consensus 84 ~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~~~~~i 163 (408)
.+++.|||+++..-..+. .|||..|||||++.+ +..
T Consensus 135 hi~~tdfglske~v~~~~---~cgt~eymApEI~~g--------h~~--------------------------------- 170 (612)
T KOG0603|consen 135 HIKLTDFGLSKEAVKEKI---ACGTYEYRAPEIING--------HLS--------------------------------- 170 (612)
T ss_pred ccccCCchhhhHhHhhhh---cccchhhhhhHhhhc--------cCC---------------------------------
Confidence 999999999987654432 299999999999852 233
Q ss_pred HhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCCCCCCC
Q psy3880 164 MEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSP 243 (408)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~~f~~~ 243 (408)
.+|+||+||++|+|++|..||.. ++.+.|+.....++.
T Consensus 171 -------------------------------------a~D~ws~gvl~felltg~~pf~~----~~~~~Il~~~~~~p~- 208 (612)
T KOG0603|consen 171 -------------------------------------AADWWSFGVLAFELLTGTLPFGG----DTMKRILKAELEMPR- 208 (612)
T ss_pred -------------------------------------cccchhhhhhHHHHhhCCCCCch----HHHHHHhhhccCCch-
Confidence 45555666666666666666655 455667766665553
Q ss_pred cCCCCCccHHHHHHHhcccCCCCCCC-----HHHHHcCCCCCCCCC
Q psy3880 244 EWNDISEDPKDLIRKLLIVTPEDRYS-----VKEALNHSFFHPKLF 284 (408)
Q Consensus 244 ~~~~iS~~~~dLI~klL~~dP~~R~t-----a~e~L~Hpwf~~~~~ 284 (408)
.++.++++++..|+..+|.+|.. +.|+++|+||+...+
T Consensus 209 ---~l~~~a~~~~~~l~~r~p~nrLg~~~~~~~eik~h~f~~~i~~ 251 (612)
T KOG0603|consen 209 ---ELSAEARSLFRQLFKRNPENRLGAGPDGVDEIKQHEFFQSIDW 251 (612)
T ss_pred ---hhhHHHHHHHHHHHhhCHHHHhccCcchhHHHhccchheeeeH
Confidence 57899999999999999999986 589999999987543
No 397
>KOG4278|consensus
Probab=99.87 E-value=1.7e-22 Score=202.95 Aligned_cols=184 Identities=24% Similarity=0.428 Sum_probs=142.9
Q ss_pred cccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhCCH-------HHHHHHHHHHHHHHHHHHHCCCeeccCCCCcE
Q psy3880 7 VAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIINSN-------PALRYIMRQLFEALEHVHNHSVVHRDLKPENI 77 (408)
Q Consensus 7 ~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~~~-------~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NI 77 (408)
+.|+|+| ++-. +..-.+|||.|||..|. |.|++... --+.+++.||..|++||..+++|||||...|+
T Consensus 320 ikHpNLV-qLLGVCT~EpPFYIiTEfM~yGN--LLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNC 396 (1157)
T KOG4278|consen 320 IKHPNLV-QLLGVCTHEPPFYIITEFMCYGN--LLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNC 396 (1157)
T ss_pred hcCccHH-HHhhhhccCCCeEEEEecccCcc--HHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhc
Confidence 5688866 4433 44557899999999999 99998543 24577889999999999999999999999999
Q ss_pred EEecCCCEEEeccccchhcccCcccccCCCC---CcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHh-CCCCCCC
Q psy3880 78 LLDDQMNVKLTDFGFARVLKKGEKLMDLCGT---PGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPFWH 153 (408)
Q Consensus 78 Ll~~~~~iKl~DFGla~~~~~~~~~~~~~gt---~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~-G~~pf~~ 153 (408)
|+.++..+|++|||+++.+..+.. ....|. ..|.|||.+..+ .++.++|||+|||++||+.| |-.||.+
T Consensus 397 LVgEnhiVKvADFGLsRlMtgDTY-TAHAGAKFPIKWTAPEsLAyN------tFSiKSDVWAFGVLLWEIATYGMsPYPG 469 (1157)
T KOG4278|consen 397 LVGENHIVKVADFGLSRLMTGDTY-TAHAGAKFPIKWTAPESLAYN------TFSIKSDVWAFGVLLWEIATYGMSPYPG 469 (1157)
T ss_pred cccccceEEeeccchhhhhcCCce-ecccCccCcccccCccccccc------ccccchhhHHHHHHHHHHHhcCCCCCCC
Confidence 999999999999999999876543 333443 369999999764 46789999999999999997 8788866
Q ss_pred chhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHH
Q psy3880 154 RKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI 233 (408)
Q Consensus 154 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i 233 (408)
-+..+.. . +
T Consensus 470 idlSqVY-~----------------------------------------------------------------------L 478 (1157)
T KOG4278|consen 470 IDLSQVY-G----------------------------------------------------------------------L 478 (1157)
T ss_pred ccHHHHH-H----------------------------------------------------------------------H
Confidence 5433222 1 2
Q ss_pred HhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHH
Q psy3880 234 MEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEA 273 (408)
Q Consensus 234 ~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~ 273 (408)
++..|....| ...++.+..|++.|.+++|.+||+..|+
T Consensus 479 LEkgyRM~~P--eGCPpkVYeLMraCW~WsPsDRPsFaei 516 (1157)
T KOG4278|consen 479 LEKGYRMDGP--EGCPPKVYELMRACWNWSPSDRPSFAEI 516 (1157)
T ss_pred HhccccccCC--CCCCHHHHHHHHHHhcCCcccCccHHHH
Confidence 2223333333 2467778899999999999999997765
No 398
>KOG1094|consensus
Probab=99.86 E-value=1.2e-21 Score=196.13 Aligned_cols=149 Identities=22% Similarity=0.396 Sum_probs=119.4
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhCCH-------HHHHHHHHHHHHHHHHHHHCCCeeccCCCCc
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIINSN-------PALRYIMRQLFEALEHVHNHSVVHRDLKPEN 76 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~~~-------~~~r~i~~qil~aL~~LH~~~IvHRDLKp~N 76 (408)
.|.|||+| ++.. ..|+...+|+||++.|+ |..++... +....++.||+.|++||.+.++|||||.+.|
T Consensus 591 qLkhPNIv-eLvGVC~~DePicmI~EYmEnGD--LnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rN 667 (807)
T KOG1094|consen 591 RLKHPNIV-ELLGVCVQDDPLCMITEYMENGD--LNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRN 667 (807)
T ss_pred ccCCCCee-EEEeeeecCCchHHHHHHHhcCc--HHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccc
Confidence 57899854 6665 57788999999999999 88877544 2345599999999999999999999999999
Q ss_pred EEEecCCCEEEeccccchhcccCccccc---CCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHh--CCCCC
Q psy3880 77 ILLDDQMNVKLTDFGFARVLKKGEKLMD---LCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV--GCPPF 151 (408)
Q Consensus 77 ILl~~~~~iKl~DFGla~~~~~~~~~~~---~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~--G~~pf 151 (408)
+|++.++++||+|||.++.+-.+..... .+-...|||+|.+..+ .+++++|+|++|+++||+++ ...||
T Consensus 668 cLv~~e~~iKiadfgmsR~lysg~yy~vqgr~vlpiRwmawEsillg------kFttaSDvWafgvTlwE~~~~C~e~Py 741 (807)
T KOG1094|consen 668 CLVDGEFTIKIADFGMSRNLYSGDYYRVQGRAVLPIRWMAWESILLG------KFTTASDVWAFGVTLWEVFMLCREQPY 741 (807)
T ss_pred eeecCcccEEecCcccccccccCCceeeecceeeeeeehhHHHHHhc------cccchhhhhhhHHHHHHHHHHHhhCch
Confidence 9999999999999999997665543221 2233589999998764 46899999999999999874 66788
Q ss_pred CCchhHHHHHHH
Q psy3880 152 WHRKQMVMLRNI 163 (408)
Q Consensus 152 ~~~~~~~~~~~i 163 (408)
....+.+...+.
T Consensus 742 ~~lt~e~vven~ 753 (807)
T KOG1094|consen 742 SQLTDEQVVENA 753 (807)
T ss_pred hhhhHHHHHHhh
Confidence 776665555443
No 399
>KOG0606|consensus
Probab=99.85 E-value=7e-22 Score=209.20 Aligned_cols=154 Identities=35% Similarity=0.680 Sum_probs=119.8
Q ss_pred HHHHHHHHHHHCCCeeccCCCCcEEEecCCCEEEeccccchhcccC--------------cc--cccCCCCCcccChhhh
Q psy3880 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKG--------------EK--LMDLCGTPGYLAPEVL 117 (408)
Q Consensus 54 qil~aL~~LH~~~IvHRDLKp~NILl~~~~~iKl~DFGla~~~~~~--------------~~--~~~~~gt~~y~aPE~l 117 (408)
+++.+++|||+.||+|||+||+|.|+..-|.+|++|||+++..... .. -...||||.|.|||++
T Consensus 151 dmvla~Eylh~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVi 230 (1205)
T KOG0606|consen 151 DMVLAVEYLHSYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVI 230 (1205)
T ss_pred hhhHHhHhhccCCeecCCCCCCcceeeecccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChhhh
Confidence 3478999999999999999999999999999999999998642110 01 1246899999999988
Q ss_pred hhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhccccccc
Q psy3880 118 RANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATG 197 (408)
Q Consensus 118 ~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~ 197 (408)
.. . +
T Consensus 231 lr------q----------------------------------------------------------------------g 234 (1205)
T KOG0606|consen 231 LR------Q----------------------------------------------------------------------G 234 (1205)
T ss_pred hh------h----------------------------------------------------------------------c
Confidence 64 2 3
Q ss_pred CCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCC---CHHHHH
Q psy3880 198 YGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRY---SVKEAL 274 (408)
Q Consensus 198 y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~---ta~e~L 274 (408)
||+++|||++|+|+|+.|.|+.||.++++.+++..++.....|+...| .+.+|++|+|.+||+.+|..|. .+-++.
T Consensus 235 ygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~wpE~de-a~p~Ea~dli~~LL~qnp~~Rlgt~ga~evk 313 (1205)
T KOG0606|consen 235 YGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEEDE-ALPPEAQDLIEQLLRQNPLCRLGTGGALEVK 313 (1205)
T ss_pred cCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhccccccCc-CCCHHHHHHHHHHHHhChHhhcccchhhhhh
Confidence 555666666666666666666777777777777777776666766543 4789999999999999999997 478999
Q ss_pred cCCCCCCCCC
Q psy3880 275 NHSFFHPKLF 284 (408)
Q Consensus 275 ~Hpwf~~~~~ 284 (408)
+|+||+...+
T Consensus 314 ~h~ff~~LDw 323 (1205)
T KOG0606|consen 314 QHGFFQLLDW 323 (1205)
T ss_pred hccceeeccc
Confidence 9999987644
No 400
>KOG0200|consensus
Probab=99.85 E-value=1.3e-21 Score=207.17 Aligned_cols=187 Identities=24% Similarity=0.421 Sum_probs=138.9
Q ss_pred ccCCcEEEEec-cCCcHHHHHHHHHhhchhhHHhhhC---------------------CHHHHHHHHHHHHHHHHHHHHC
Q psy3880 8 AHSRVVVRVKE-EGDDLKHLAAQVVDKGEAAVQDIIN---------------------SNPALRYIMRQLFEALEHVHNH 65 (408)
Q Consensus 8 ~~~~~i~~~~~-~~~~~~~lv~e~~~~g~~~l~~~~~---------------------~~~~~r~i~~qil~aL~~LH~~ 65 (408)
.|+|+|-.+-. ..+...++|.|||..|+ |.+++. ...++-.+..||+.|++||++.
T Consensus 360 ~H~niv~llG~~t~~~~~~~v~Ey~~~G~--L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~ 437 (609)
T KOG0200|consen 360 KHPNIVNLLGACTQDGPLYVIVEYAEHGD--LLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASV 437 (609)
T ss_pred CCcchhhheeeeccCCceEEEEEeccCCc--HHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhC
Confidence 47776533433 23567789999999998 766553 2246788999999999999999
Q ss_pred CCeeccCCCCcEEEecCCCEEEeccccchhcccCccccc--CCCCC--cccChhhhhhccccCcCCCCcchhhhhhhHHH
Q psy3880 66 SVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMD--LCGTP--GYLAPEVLRANMFEDATGYGQAVDVWACGVIM 141 (408)
Q Consensus 66 ~IvHRDLKp~NILl~~~~~iKl~DFGla~~~~~~~~~~~--~~gt~--~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil 141 (408)
.+|||||.+.|||+..+..+||+|||+|+.......... ..|+. .|||||.+.. ..|+.++||||+||++
T Consensus 438 ~~vHRDLAaRNVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~------~~ft~kSDVWSfGI~L 511 (609)
T KOG0200|consen 438 PCVHRDLAARNVLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFD------RVFTSKSDVWSFGILL 511 (609)
T ss_pred CccchhhhhhhEEecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhcc------CcccccchhhHHHHHH
Confidence 999999999999999999999999999986554443321 22222 4999999974 4578999999999999
Q ss_pred HHHHh-CCCCCCCch-hHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCC
Q psy3880 142 YTLLV-GCPPFWHRK-QMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCP 219 (408)
Q Consensus 142 ~~ll~-G~~pf~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~ 219 (408)
||+++ |..|+.+-. ..+.+..+
T Consensus 512 ~EifsLG~~PYp~~~~~~~l~~~l-------------------------------------------------------- 535 (609)
T KOG0200|consen 512 WEIFTLGGTPYPGIPPTEELLEFL-------------------------------------------------------- 535 (609)
T ss_pred HHHhhCCCCCCCCCCcHHHHHHHH--------------------------------------------------------
Confidence 99997 778875522 22222222
Q ss_pred CCCCchhHHHHHHHHhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHc
Q psy3880 220 PFWHRKQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALN 275 (408)
Q Consensus 220 Pf~~~~~~~~~~~i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~ 275 (408)
..| +....| ...+++..++++.|...+|++|||..|+..
T Consensus 536 --------------~~G-~r~~~P--~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~ 574 (609)
T KOG0200|consen 536 --------------KEG-NRMEQP--EHCSDEIYDLMKSCWNADPEDRPTFSECVE 574 (609)
T ss_pred --------------hcC-CCCCCC--CCCCHHHHHHHHHHhCCCcccCCCHHHHHH
Confidence 111 222223 245889999999999999999999888764
No 401
>KOG1152|consensus
Probab=99.84 E-value=3.7e-22 Score=199.44 Aligned_cols=138 Identities=33% Similarity=0.633 Sum_probs=118.8
Q ss_pred cCCcEEEEe-ccCCcHHHHHHHHHhhchhhHHhhhC-----CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEecC
Q psy3880 9 HSRVVVRVK-EEGDDLKHLAAQVVDKGEAAVQDIIN-----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQ 82 (408)
Q Consensus 9 ~~~~i~~~~-~~~~~~~~lv~e~~~~g~~~l~~~~~-----~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl~~~ 82 (408)
|+|+|..+. .|+++..||+||-=.-| ..|||+|. ++++++.|++||+.|+++||+.||||||||-||+.++.+
T Consensus 628 H~NIlKlLdfFEddd~yyl~te~hg~g-IDLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~ 706 (772)
T KOG1152|consen 628 HENILKLLDFFEDDDYYYLETEVHGEG-IDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSN 706 (772)
T ss_pred ccchhhhhheeecCCeeEEEecCCCCC-cchhhhhhccCccchHHHHHHHHHHHhccccccccCceecccccccEEEecC
Confidence 999775555 38888999999965445 45999985 458999999999999999999999999999999999999
Q ss_pred CCEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCC
Q psy3880 83 MNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH 153 (408)
Q Consensus 83 ~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~ 153 (408)
|-+||+|||.|..... .....+.||..|.|||++.++.+ -++.-|||++|+++|.+.....||++
T Consensus 707 g~~klidfgsaa~~ks-gpfd~f~gtv~~aapevl~g~~y-----~gk~qdiwalgillytivykenpyyn 771 (772)
T KOG1152|consen 707 GFVKLIDFGSAAYTKS-GPFDVFVGTVDYAAPEVLGGEKY-----LGKPQDIWALGILLYTIVYKENPYYN 771 (772)
T ss_pred CeEEEeeccchhhhcC-CCcceeeeeccccchhhhCCCcc-----CCCcchhhhhhheeeEEEeccCCCcC
Confidence 9999999999876554 35667899999999999987644 36788999999999999999888864
No 402
>KOG1345|consensus
Probab=99.83 E-value=1.1e-21 Score=180.89 Aligned_cols=143 Identities=27% Similarity=0.465 Sum_probs=99.5
Q ss_pred cccccCCcEEEEec---cCCcHHHHHHHHHhhchhhHHhhhCC----HHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcE
Q psy3880 5 EMVAHSRVVVRVKE---EGDDLKHLAAQVVDKGEAAVQDIINS----NPALRYIMRQLFEALEHVHNHSVVHRDLKPENI 77 (408)
Q Consensus 5 ~~~~~~~~i~~~~~---~~~~~~~lv~e~~~~g~~~l~~~~~~----~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NI 77 (408)
+-|.|++.|+.-++ +..|...+++||+..|+ |..-+.. +...+.++.|+++|+.|+|++++||||||.+||
T Consensus 75 ~~Ls~H~hIi~tY~vaFqt~d~YvF~qE~aP~gd--L~snv~~~GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNi 152 (378)
T KOG1345|consen 75 FFLSPHQHIIDTYEVAFQTSDAYVFVQEFAPRGD--LRSNVEAAGIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENI 152 (378)
T ss_pred eeeccchhhhHHHHHHhhcCceEEEeeccCccch--hhhhcCcccccHHHHHHHHHHHHHHHHHhhccchhhcccccceE
Confidence 34556665655443 44456668999999999 7665543 467899999999999999999999999999999
Q ss_pred EEe--cCCCEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCC
Q psy3880 78 LLD--DQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFW 152 (408)
Q Consensus 78 Ll~--~~~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~ 152 (408)
|+- +...+||||||+.+..+.. ....--+..|-+||++..- .++.....+.+|+|.||+++|..++|++||+
T Consensus 153 Lif~~df~rvKlcDFG~t~k~g~t--V~~~~~~~~y~~pe~~~~~-~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQ 226 (378)
T KOG1345|consen 153 LIFDADFYRVKLCDFGLTRKVGTT--VKYLEYVNNYHAPELCDTV-VNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQ 226 (378)
T ss_pred EEecCCccEEEeeecccccccCce--ehhhhhhcccCCcHHHhhc-cccceEecccccchheeeeeeeeecCCCcch
Confidence 994 3458999999988654322 1222334568899887542 2222333555666666666666666666664
No 403
>KOG1025|consensus
Probab=99.83 E-value=1.7e-20 Score=193.66 Aligned_cols=145 Identities=26% Similarity=0.410 Sum_probs=118.3
Q ss_pred cccccCCcEEEEeccCCcHHHHHHHHHhhchhhHHhhhCCH------HHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEE
Q psy3880 5 EMVAHSRVVVRVKEEGDDLKHLAAQVVDKGEAAVQDIINSN------PALRYIMRQLFEALEHVHNHSVVHRDLKPENIL 78 (408)
Q Consensus 5 ~~~~~~~~i~~~~~~~~~~~~lv~e~~~~g~~~l~~~~~~~------~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NIL 78 (408)
+.|+|+|++.-+.---.+..-||++|+.+|. |.|++..+ +.+..+..||++|+.|||.+++|||||...|+|
T Consensus 753 asldHpnl~RLLgvc~~s~~qlvtq~mP~G~--LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVL 830 (1177)
T KOG1025|consen 753 ASLDHPNLLRLLGVCMLSTLQLVTQLMPLGC--LLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVL 830 (1177)
T ss_pred hcCCCchHHHHhhhcccchHHHHHHhcccch--HHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhhee
Confidence 3589999774444333445889999999999 99987544 678889999999999999999999999999999
Q ss_pred EecCCCEEEeccccchhcccCcccccC-CC--CCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHh-CCCCCCCc
Q psy3880 79 LDDQMNVKLTDFGFARVLKKGEKLMDL-CG--TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPFWHR 154 (408)
Q Consensus 79 l~~~~~iKl~DFGla~~~~~~~~~~~~-~g--t~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~-G~~pf~~~ 154 (408)
+..-..+||.|||+|+.+......... .| .+.|||-|.+.. ..|+.++||||+||++||++| |..|+.+.
T Consensus 831 VksP~hvkitdfgla~ll~~d~~ey~~~~gK~pikwmale~i~~------~~~thqSDVWsfGVtiWElmTFGa~Py~gi 904 (1177)
T KOG1025|consen 831 VKSPNHVKITDFGLAKLLAPDEKEYSAPGGKVPIKWMALESIRI------RKYTHQSDVWSFGVTIWELMTFGAKPYDGI 904 (1177)
T ss_pred ecCCCeEEEEecchhhccCcccccccccccccCcHHHHHHHhhc------cCCCchhhhhhhhhhHHHHHhcCCCccCCC
Confidence 999999999999999988765543332 22 246888888864 568899999999999999997 88888765
Q ss_pred hhH
Q psy3880 155 KQM 157 (408)
Q Consensus 155 ~~~ 157 (408)
...
T Consensus 905 ~~~ 907 (1177)
T KOG1025|consen 905 PAE 907 (1177)
T ss_pred CHH
Confidence 543
No 404
>KOG3653|consensus
Probab=99.82 E-value=7.1e-21 Score=186.84 Aligned_cols=143 Identities=27% Similarity=0.474 Sum_probs=113.0
Q ss_pred cccCCcEEEEecc-CCc----HHHHHHHHHhhchhhHHhhhCCH----HHHHHHHHHHHHHHHHHHH---------CCCe
Q psy3880 7 VAHSRVVVRVKEE-GDD----LKHLAAQVVDKGEAAVQDIINSN----PALRYIMRQLFEALEHVHN---------HSVV 68 (408)
Q Consensus 7 ~~~~~~i~~~~~~-~~~----~~~lv~e~~~~g~~~l~~~~~~~----~~~r~i~~qil~aL~~LH~---------~~Iv 68 (408)
+.|+|++.-+-.+ ..+ ...||++|-..|. |.+++... .++..++..|+.||+|||+ ..|+
T Consensus 261 m~h~nIl~Fi~~ekr~t~~~~eywLVt~fh~kGs--L~dyL~~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~Ia 338 (534)
T KOG3653|consen 261 MKHENILQFIGAEKRGTADRMEYWLVTEFHPKGS--LCDYLKANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIA 338 (534)
T ss_pred ccchhHHHhhchhccCCccccceeEEeeeccCCc--HHHHHHhccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccc
Confidence 5688865333332 222 3459999999999 99998543 8999999999999999995 4699
Q ss_pred eccCCCCcEEEecCCCEEEeccccchhcccCccc---ccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHH
Q psy3880 69 HRDLKPENILLDDQMNVKLTDFGFARVLKKGEKL---MDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLL 145 (408)
Q Consensus 69 HRDLKp~NILl~~~~~iKl~DFGla~~~~~~~~~---~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll 145 (408)
|||||..|||+.+|+++-|+|||||..+.++... ...+||..|||||++.+..--.....-++.||||+|.++||++
T Consensus 339 HRDlkSkNVLvK~DlTccIaDFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~ 418 (534)
T KOG3653|consen 339 HRDLKSKNVLVKNDLTCCIADFGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIA 418 (534)
T ss_pred cccccccceEEccCCcEEeeccceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999988765432 3478999999999997643111122235799999999999999
Q ss_pred hCCCCC
Q psy3880 146 VGCPPF 151 (408)
Q Consensus 146 ~G~~pf 151 (408)
+++.-+
T Consensus 419 SRC~~~ 424 (534)
T KOG3653|consen 419 SRCTDA 424 (534)
T ss_pred hhcccc
Confidence 988755
No 405
>KOG2052|consensus
Probab=99.81 E-value=2.2e-20 Score=182.23 Aligned_cols=141 Identities=24% Similarity=0.404 Sum_probs=112.4
Q ss_pred cccccCCcEEEEeccC-Cc-----HHHHHHHHHhhchhhHHhhhCCH----HHHHHHHHHHHHHHHHHHH--------CC
Q psy3880 5 EMVAHSRVVVRVKEEG-DD-----LKHLAAQVVDKGEAAVQDIINSN----PALRYIMRQLFEALEHVHN--------HS 66 (408)
Q Consensus 5 ~~~~~~~~i~~~~~~~-~~-----~~~lv~e~~~~g~~~l~~~~~~~----~~~r~i~~qil~aL~~LH~--------~~ 66 (408)
-||-|+|++ .+.+.+ .+ ..+||.||=+.|. |+|++++. ..+..++..++.||+|||. -.
T Consensus 260 vmLRHENIL-gFIaaD~~~~gs~TQLwLvTdYHe~GS--L~DyL~r~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPa 336 (513)
T KOG2052|consen 260 VMLRHENIL-GFIAADNKDNGSWTQLWLVTDYHEHGS--LYDYLNRNTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPA 336 (513)
T ss_pred HHhccchhh-hhhhccccCCCceEEEEEeeecccCCc--HHHHHhhccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCch
Confidence 489999965 555422 11 2589999999999 99999765 7788899999999999994 35
Q ss_pred CeeccCCCCcEEEecCCCEEEeccccchhcccCc-----ccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHH
Q psy3880 67 VVHRDLKPENILLDDQMNVKLTDFGFARVLKKGE-----KLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIM 141 (408)
Q Consensus 67 IvHRDLKp~NILl~~~~~iKl~DFGla~~~~~~~-----~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil 141 (408)
|.|||||..|||+..++.+-|+|+|||....... .....+||..|||||++...+-.+...--+.+||||||.++
T Consensus 337 IAHRDlKSKNILVKkn~~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVl 416 (513)
T KOG2052|consen 337 IAHRDLKSKNILVKKNGTCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVL 416 (513)
T ss_pred hhccccccccEEEccCCcEEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHH
Confidence 9999999999999999999999999997654432 23457999999999999765433222233579999999999
Q ss_pred HHHHhCC
Q psy3880 142 YTLLVGC 148 (408)
Q Consensus 142 ~~ll~G~ 148 (408)
||++..+
T Consensus 417 WEiarRc 423 (513)
T KOG2052|consen 417 WEIARRC 423 (513)
T ss_pred HHHHHHh
Confidence 9998654
No 406
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.80 E-value=1.1e-19 Score=166.40 Aligned_cols=154 Identities=41% Similarity=0.620 Sum_probs=122.3
Q ss_pred cccCCcEEEEec-cCCcHHHHHHHHHhhchhhHHhhh------CCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEE
Q psy3880 7 VAHSRVVVRVKE-EGDDLKHLAAQVVDKGEAAVQDII------NSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILL 79 (408)
Q Consensus 7 ~~~~~~i~~~~~-~~~~~~~lv~e~~~~g~~~l~~~~------~~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl 79 (408)
+.|++++..+.. ..++..++++|++.++. |.+.+ .+...+..++.|++.++.+||+++++|+|++|.||++
T Consensus 54 ~~~~~i~~~~~~~~~~~~~~~v~e~~~~~~--L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v 131 (225)
T smart00221 54 LKHPNIVKLYGVFEDPEPLYLVMEYCEGGD--LFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILL 131 (225)
T ss_pred CCCCChhhheeeeecCCceEEEEeccCCCC--HHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE
Confidence 467765533332 34467789999999987 76665 3446788999999999999999999999999999999
Q ss_pred ecCCCEEEeccccchhcccCc--ccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCC--ch
Q psy3880 80 DDQMNVKLTDFGFARVLKKGE--KLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH--RK 155 (408)
Q Consensus 80 ~~~~~iKl~DFGla~~~~~~~--~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~--~~ 155 (408)
+.++.++|+|||++....... ......++..|++||.+. ....++.++|+||+|+++++|++|+.||.+ ++
T Consensus 132 ~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~~pe~~~-----~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~~~~~ 206 (225)
T smart00221 132 GMDGLVKLADFGLARFIHRDLAALLKTVKGTPFYLAPEVLL-----GGKGYGEAVDIWSLGVILYELLWGPEPFSGEGEF 206 (225)
T ss_pred cCCCCEEEeeCceeeEecCcccccccceeccCCcCCHhHhc-----CCCCCCchhhHHHHHHHHHHHHHCCCCccccchh
Confidence 999999999999988765442 334567888999999884 124567799999999999999999999988 44
Q ss_pred hHHHHHHHHhcc
Q psy3880 156 QMVMLRNIMEGK 167 (408)
Q Consensus 156 ~~~~~~~i~~~~ 167 (408)
..++.+.|..+.
T Consensus 207 ~~~~~~~~~~~~ 218 (225)
T smart00221 207 TSLLSDVWSFGV 218 (225)
T ss_pred HHHHHHHHhcCC
Confidence 446667776654
No 407
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.80 E-value=1.2e-19 Score=162.80 Aligned_cols=109 Identities=38% Similarity=0.675 Sum_probs=84.8
Q ss_pred cccCCcEEEEecc--CCcHHHHHHHHHhhchhhHHhhh------CCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEE
Q psy3880 7 VAHSRVVVRVKEE--GDDLKHLAAQVVDKGEAAVQDII------NSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENIL 78 (408)
Q Consensus 7 ~~~~~~i~~~~~~--~~~~~~lv~e~~~~g~~~l~~~~------~~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NIL 78 (408)
+.|++ |+.+... ..+..++++|++.|+. |.+.+ .+...+..++.+++.++++||++|++|+||+|.||+
T Consensus 48 l~~~~-i~~~~~~~~~~~~~~~~~e~~~~~~--l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~ 124 (215)
T cd00180 48 LNHPN-IVKLYGVFEDENHLYLVMEYCEGGS--LKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENIL 124 (215)
T ss_pred cCCCC-eeeEeeeeecCCeEEEEEecCCCCc--HHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEE
Confidence 46665 4455543 3357789999999887 66655 344788999999999999999999999999999999
Q ss_pred Eec-CCCEEEeccccchhcccCc-ccccCCCCCcccChhhhh
Q psy3880 79 LDD-QMNVKLTDFGFARVLKKGE-KLMDLCGTPGYLAPEVLR 118 (408)
Q Consensus 79 l~~-~~~iKl~DFGla~~~~~~~-~~~~~~gt~~y~aPE~l~ 118 (408)
++. ++.++|+|||.+....... ......+...|++||.+.
T Consensus 125 ~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 166 (215)
T cd00180 125 LDSDNGKVKLADFGLSKLLTSDKSLLKTIVGTPAYMAPEVLL 166 (215)
T ss_pred EeCCCCcEEEecCCceEEccCCcchhhcccCCCCccChhHhc
Confidence 998 8999999999987654432 123355777889998774
No 408
>KOG0965|consensus
Probab=99.75 E-value=3.7e-19 Score=180.61 Aligned_cols=61 Identities=57% Similarity=0.993 Sum_probs=59.5
Q ss_pred hHHHHHHHhhhcCCCCCccccccccccccchhHHHHHhcCCCCCCCCCCCCCCcccccccc
Q psy3880 347 VKILRQYNALKEGREPDLSDYKEFKLKEDNVGFKMLQKLGWQEGSGLGTDGGGIQEPVNKI 407 (408)
Q Consensus 347 ~~~~~~~~a~k~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (408)
-+||+++++++++++||+|+|+++||+++||||||||||||+||+|||++|.||++|||+.
T Consensus 878 ~KFme~~~a~k~~rkpd~sdyke~KLt~dNiGfQMLqKMGWKEGeGLGS~gkGI~dPVnkg 938 (988)
T KOG0965|consen 878 AKFMERGRAMKKKRKPDDSDYKEQKLTDDNIGFQMLQKMGWKEGEGLGSLGKGIRDPVNKG 938 (988)
T ss_pred HHHHHhhhhhhhccCCChHHHHHhhccccchHHHHHHHhCccccccccccCcccccchhhc
Confidence 4899999999999999999999999999999999999999999999999999999999985
No 409
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.74 E-value=3e-18 Score=162.46 Aligned_cols=141 Identities=38% Similarity=0.636 Sum_probs=106.2
Q ss_pred cccCCcEEEEeccC--CcHHHHHHHHHhhchhhHHhhh--------CCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCc
Q psy3880 7 VAHSRVVVRVKEEG--DDLKHLAAQVVDKGEAAVQDII--------NSNPALRYIMRQLFEALEHVHNHSVVHRDLKPEN 76 (408)
Q Consensus 7 ~~~~~~i~~~~~~~--~~~~~lv~e~~~~g~~~l~~~~--------~~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~N 76 (408)
+.|++.|+.+.... ....+++++++.++. +.+.+ .....+..++.|++.++.|+|+.+++|||+||+|
T Consensus 54 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~--l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~n 131 (384)
T COG0515 54 LNHPPNIVKLYDFFQDEGSLYLVMEYVDGGS--LEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPEN 131 (384)
T ss_pred ccCCcceeeEEEEEecCCEEEEEEecCCCCc--HHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHH
Confidence 45553354555433 223589999999998 54433 3347899999999999999999999999999999
Q ss_pred EEEecCC-CEEEeccccchhcccCc-------ccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCC
Q psy3880 77 ILLDDQM-NVKLTDFGFARVLKKGE-------KLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGC 148 (408)
Q Consensus 77 ILl~~~~-~iKl~DFGla~~~~~~~-------~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~ 148 (408)
|+++..+ .++++|||++..+.... .....+||+.|+|||.+.... ...+....|+||+|++++++++|.
T Consensus 132 il~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~---~~~~~~~~D~~s~g~~~~~~~~~~ 208 (384)
T COG0515 132 ILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLS---LAYASSSSDIWSLGITLYELLTGL 208 (384)
T ss_pred eeecCCCCeEEEeccCcceecCCCCccccccccccccccccccCCHHHhcCCC---CCCCCchHhHHHHHHHHHHHHhCC
Confidence 9999888 79999999998654432 235678999999999986420 024566788888888888877777
Q ss_pred CCCC
Q psy3880 149 PPFW 152 (408)
Q Consensus 149 ~pf~ 152 (408)
.||.
T Consensus 209 ~p~~ 212 (384)
T COG0515 209 PPFE 212 (384)
T ss_pred CCCC
Confidence 7753
No 410
>KOG1024|consensus
Probab=99.74 E-value=9.8e-18 Score=161.47 Aligned_cols=151 Identities=30% Similarity=0.496 Sum_probs=116.8
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEecCCCEEEeccccchhcccCcc--cccC-CCCCcccChhhhhhccc
Q psy3880 46 PALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEK--LMDL-CGTPGYLAPEVLRANMF 122 (408)
Q Consensus 46 ~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl~~~~~iKl~DFGla~~~~~~~~--~~~~-~gt~~y~aPE~l~~~~~ 122 (408)
-++..++.|+..|++|||++||||.||...|++|++...+||+|=.+++-+.+... +.+. -....||+||.+..
T Consensus 396 ~qlV~masQla~am~hlh~~~ViHkDiAaRNCvIdd~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n--- 472 (563)
T KOG1024|consen 396 IQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVIDDQLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQN--- 472 (563)
T ss_pred HHHHHHHHHHHHHHHHHHhcCcccchhhhhcceehhheeEEeccchhccccCcccccccCCCCCCcccccCHHHHhh---
Confidence 56778899999999999999999999999999999999999999999987766542 2221 12347999999975
Q ss_pred cCcCCCCcchhhhhhhHHHHHHHh-CCCCCCCchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCc
Q psy3880 123 EDATGYGQAVDVWACGVIMYTLLV-GCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQA 201 (408)
Q Consensus 123 ~~~~~~~~~~DiwSlGvil~~ll~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~ 201 (408)
..|+.++|+|||||++|||++ |+.|+..-+..++..-+
T Consensus 473 ---~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~yl-------------------------------------- 511 (563)
T KOG1024|consen 473 ---SHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYL-------------------------------------- 511 (563)
T ss_pred ---hhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHH--------------------------------------
Confidence 457899999999999999997 87777544433333222
Q ss_pred ccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHc
Q psy3880 202 VDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALN 275 (408)
Q Consensus 202 ~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~ 275 (408)
+. .|....| .+.++++-..+.-|...+|++|||.+|+..
T Consensus 512 --------------------------------kd-GyRlaQP--~NCPDeLf~vMacCWallpeeRPsf~Qlv~ 550 (563)
T KOG1024|consen 512 --------------------------------KD-GYRLAQP--FNCPDELFTVMACCWALLPEERPSFSQLVI 550 (563)
T ss_pred --------------------------------hc-cceecCC--CCCcHHHHHHHHHHHhcCcccCCCHHHHHH
Confidence 22 2222222 256888999999999999999999988753
No 411
>KOG1033|consensus
Probab=99.70 E-value=1.6e-17 Score=166.03 Aligned_cols=113 Identities=31% Similarity=0.561 Sum_probs=97.7
Q ss_pred HHHHHHHHHhhchhhHHhhhCCH--------HHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEecCCCEEEeccccch
Q psy3880 23 LKHLAAQVVDKGEAAVQDIINSN--------PALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFAR 94 (408)
Q Consensus 23 ~~~lv~e~~~~g~~~l~~~~~~~--------~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl~~~~~iKl~DFGla~ 94 (408)
..||.|++|..+. |.|+|... -.+..++.|+..|++| ++.+|||+||.||....+..+||.|||+..
T Consensus 330 ~lyI~Mn~c~~~t--ledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~~d~q~kIgDFgl~t 404 (516)
T KOG1033|consen 330 YLYIQMNLCEKET--LEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFSDDDQLKIGDFGLVT 404 (516)
T ss_pred chhhhhhhhhhhh--HHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhccccccccccchhhhhhhhhhee
Confidence 4789999999888 99998632 5788999999999999 999999999999999999999999999987
Q ss_pred hcccCc-------ccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHh
Q psy3880 95 VLKKGE-------KLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV 146 (408)
Q Consensus 95 ~~~~~~-------~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~ 146 (408)
...... ......||+.||+||.+.++ .|+.++||||||++++|++.
T Consensus 405 s~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~------~y~~kvdIyaLGlil~EL~~ 457 (516)
T KOG1033|consen 405 SQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQ------QYSEKVDIYALGLILAELLI 457 (516)
T ss_pred ecccCCcccchhhhhhhcccccccCCHHHHhhh------hhhhhcchhhHHHHHHHHHH
Confidence 665444 34457899999999999864 57889999999999999886
No 412
>KOG1240|consensus
Probab=99.69 E-value=1.4e-16 Score=169.72 Aligned_cols=130 Identities=28% Similarity=0.407 Sum_probs=90.4
Q ss_pred cCCcHHHHHHHHHhhchhhHHhhhCCH-----HHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEecCCCEEEeccccc
Q psy3880 19 EGDDLKHLAAQVVDKGEAAVQDIINSN-----PALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFA 93 (408)
Q Consensus 19 ~~~~~~~lv~e~~~~g~~~l~~~~~~~-----~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl~~~~~iKl~DFGla 93 (408)
+.+.-.|||=+|+... |+|++..+ -+-++|+.||+.||.-||..||+|+|||.||||++.-..+.|+||..-
T Consensus 91 ~t~kAAylvRqyvkhn---LyDRlSTRPFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSWNW~~LtDFAsF 167 (1431)
T KOG1240|consen 91 VTDKAAYLVRQYVKHN---LYDRLSTRPFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITSWNWLYLTDFASF 167 (1431)
T ss_pred HhhHHHHHHHHHHhhh---hhhhhccchHHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEeeechhhhhccccc
Confidence 4445579999999876 89999776 477999999999999999999999999999999999999999999643
Q ss_pred hh--cccCc--cc----ccCCCCCcccChhhhhhcc-----ccCcCCCCcchhhhhhhHHHHHHHh-CCCCC
Q psy3880 94 RV--LKKGE--KL----MDLCGTPGYLAPEVLRANM-----FEDATGYGQAVDVWACGVIMYTLLV-GCPPF 151 (408)
Q Consensus 94 ~~--~~~~~--~~----~~~~gt~~y~aPE~l~~~~-----~~~~~~~~~~~DiwSlGvil~~ll~-G~~pf 151 (408)
+- +..+. .. .+...-..|.|||.+.... ........++-||+|+||+++|+++ |.+||
T Consensus 168 KPtYLPeDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF 239 (1431)
T KOG1240|consen 168 KPTYLPEDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLF 239 (1431)
T ss_pred CCccCCCCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcc
Confidence 31 11111 01 1111223699999886421 0001113445666666666666664 55555
No 413
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.66 E-value=3.1e-17 Score=162.72 Aligned_cols=124 Identities=21% Similarity=0.265 Sum_probs=92.2
Q ss_pred ccccCCcEEEEeccCCcHHHHHHHHHhhchhhHHhhhCCHHHHHHHHHHHHHHHHHHHHCCCeeccC-CCCcEEEecCCC
Q psy3880 6 MVAHSRVVVRVKEEGDDLKHLAAQVVDKGEAAVQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDL-KPENILLDDQMN 84 (408)
Q Consensus 6 ~~~~~~~i~~~~~~~~~~~~lv~e~~~~g~~~l~~~~~~~~~~r~i~~qil~aL~~LH~~~IvHRDL-Kp~NILl~~~~~ 84 (408)
.|.|+++|..+.+.+ ..||||||+.|+. |... .... ...++.|++.||.|||++||+|||| ||+|||++.++.
T Consensus 77 ~L~h~~iv~~l~~~~--~~~LVmE~~~G~~--L~~~-~~~~-~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~~~~~ 150 (365)
T PRK09188 77 TVRGIGVVPQLLATG--KDGLVRGWTEGVP--LHLA-RPHG-DPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMGPDGE 150 (365)
T ss_pred hccCCCCCcEEEEcC--CcEEEEEccCCCC--HHHh-Cccc-hHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEcCCCC
Confidence 467998876666543 4699999999998 6532 2222 2568899999999999999999999 999999998899
Q ss_pred EEEeccccchhcccCcc---------cccCCCCCcccChhhhhhccccCcCCCCcchhhh
Q psy3880 85 VKLTDFGFARVLKKGEK---------LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVW 135 (408)
Q Consensus 85 iKl~DFGla~~~~~~~~---------~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~Diw 135 (408)
+||+|||+|+.+..... +...++++.|+|||.+...........+...|-|
T Consensus 151 ikLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~~dgW 210 (365)
T PRK09188 151 AAVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPRERKILARKSLPSRIW 210 (365)
T ss_pred EEEEECccceecccCcchhhhhhhhhhhhhhccCccCCcccCChhhhccccccccccCcE
Confidence 99999999986654321 2346788899999998654322223334456666
No 414
>KOG4158|consensus
Probab=99.64 E-value=6.3e-16 Score=149.51 Aligned_cols=161 Identities=32% Similarity=0.533 Sum_probs=101.7
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEe--cCC--CEEEeccccchhccc-------CcccccCCCCCcccCh
Q psy3880 46 PALRYIMRQLFEALEHVHNHSVVHRDLKPENILLD--DQM--NVKLTDFGFARVLKK-------GEKLMDLCGTPGYLAP 114 (408)
Q Consensus 46 ~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl~--~~~--~iKl~DFGla~~~~~-------~~~~~~~~gt~~y~aP 114 (408)
...+-++.|+|+|+.|||++||.|||+|.+|||+. +++ .+.|+|||+|---+. .....+..|.-.-|||
T Consensus 341 r~~~~~laQlLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAP 420 (598)
T KOG4158|consen 341 RTGRVILAQLLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAP 420 (598)
T ss_pred HHHHHHHHHHHHHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecch
Confidence 56788899999999999999999999999999995 333 578999998743211 1112235577778999
Q ss_pred hhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccc
Q psy3880 115 EVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFED 194 (408)
Q Consensus 115 E~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~ 194 (408)
|+.....-..+.
T Consensus 421 Ei~ta~PGp~av-------------------------------------------------------------------- 432 (598)
T KOG4158|consen 421 EIATAVPGPNAV-------------------------------------------------------------------- 432 (598)
T ss_pred hhhhcCCCCcee--------------------------------------------------------------------
Confidence 987532100000
Q ss_pred cccCCCcccccchhhhHHHhhcCCCCCCCchhHHH-HHHHHhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCC---H
Q psy3880 195 ATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVM-LRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYS---V 270 (408)
Q Consensus 195 ~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~-~~~i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~t---a 270 (408)
..|+ ++|.|++|-+.|+++....||+++..+.+ .+...+.+.. +--+.+++.+++|+..+|+.||++|+| |
T Consensus 433 -vny~-kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yqe~qLP---alp~~vpp~~rqlV~~lL~r~pskRvsp~iA 507 (598)
T KOG4158|consen 433 -VNYE-KADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQESQLP---ALPSRVPPVARQLVFDLLKRDPSKRVSPNIA 507 (598)
T ss_pred -eccc-hhhhhhhhhhHHHHhccCCcccccchheechhhhhhhhCC---CCcccCChHHHHHHHHHhcCCccccCCccHH
Confidence 0011 44555555555555555555554332211 1111222211 122468899999999999999999999 4
Q ss_pred HHHHcCCCC
Q psy3880 271 KEALNHSFF 279 (408)
Q Consensus 271 ~e~L~Hpwf 279 (408)
..+|+-.-|
T Consensus 508 ANvl~LsLw 516 (598)
T KOG4158|consen 508 ANVLNLSLW 516 (598)
T ss_pred HhHHHHHHh
Confidence 556654433
No 415
>KOG0590|consensus
Probab=99.63 E-value=2.8e-17 Score=173.06 Aligned_cols=196 Identities=31% Similarity=0.508 Sum_probs=147.6
Q ss_pred cCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhh-CCH------HHHHHHHHHHHHHHHHHH-HCCCeeccCCCCcEE
Q psy3880 9 HSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDII-NSN------PALRYIMRQLFEALEHVH-NHSVVHRDLKPENIL 78 (408)
Q Consensus 9 ~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~-~~~------~~~r~i~~qil~aL~~LH-~~~IvHRDLKp~NIL 78 (408)
|+|.+ .+.+ ......++++++..||+ +++.+ ... ..+..++.|+..++.|+| ..++.|||+||+|.+
T Consensus 80 h~n~~-~~~~~~~~~~~~~~~~~~s~g~~--~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~ 156 (601)
T KOG0590|consen 80 HSNTV-HMIEPSSSPRSYLLSLSYSDGGS--LFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSL 156 (601)
T ss_pred ccccc-ccCCccCCCcccccccCcccccc--cccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccch
Confidence 78755 5554 45567889999999999 99888 332 678999999999999999 999999999999999
Q ss_pred EecCC-CEEEeccccchhccc-Cc---ccccCCC-CCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCC
Q psy3880 79 LDDQM-NVKLTDFGFARVLKK-GE---KLMDLCG-TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFW 152 (408)
Q Consensus 79 l~~~~-~iKl~DFGla~~~~~-~~---~~~~~~g-t~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~ 152 (408)
++..+ .+|++|||+|..+.. .. .+...+| ++.|+|||...+. ...+...|+||+|+++..+++|..|+.
T Consensus 157 l~~s~~~l~~~df~~At~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~-----~~~~~~~d~~S~g~~l~~~~~g~~p~~ 231 (601)
T KOG0590|consen 157 LDESGSALKIADFGLATAYRNKNGAERSLKDRCGSSPPYGAPEHLSGK-----AYRGPSVDVWSLGIVLSAMLTGELPWD 231 (601)
T ss_pred hccCCCcccCCCchhhccccccCCcceeeecccCCCCCCCCcccccch-----hhcCCCcccccccccccccccCCCCcc
Confidence 99999 999999999987765 22 2345789 9999999987642 123455666666666666666666653
Q ss_pred CchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHH
Q psy3880 153 HRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRN 232 (408)
Q Consensus 153 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~ 232 (408)
...... .....
T Consensus 232 ~~~~~~---------------------------------------------------------------------~~~~~ 242 (601)
T KOG0590|consen 232 FPSRKD---------------------------------------------------------------------GRYSS 242 (601)
T ss_pred cccccc---------------------------------------------------------------------cccee
Confidence 211100 00001
Q ss_pred HHhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCC
Q psy3880 233 IMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHP 281 (408)
Q Consensus 233 i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~ 281 (408)
.......+....|..++..+.+++.++|..+|..|.|.+++-.+||+..
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d~~~~~ 291 (601)
T KOG0590|consen 243 WKSNKGRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKLDNWLSS 291 (601)
T ss_pred ecccccccccCccccCChhhhhcccccccCCchhccccccccccccccc
Confidence 1111123345668999999999999999999999999999999999987
No 416
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.63 E-value=5.6e-16 Score=148.15 Aligned_cols=101 Identities=28% Similarity=0.414 Sum_probs=70.1
Q ss_pred HHHHHHHHHHHHHHCCCeeccCCCCcEEEecCCCEEEeccccchhcccCcccccCCCCCcccChhhhhhccc--cCcCCC
Q psy3880 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMF--EDATGY 128 (408)
Q Consensus 51 i~~qil~aL~~LH~~~IvHRDLKp~NILl~~~~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~--~~~~~~ 128 (408)
+..|++..+++||+.|+||+||||+|++++.+|.+.|+||+.....+. .......+..|.+||....... .....+
T Consensus 150 lT~Q~I~lvA~Lh~~GlVHgdi~~~nfll~~~G~v~Lg~F~~~~r~g~--~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~ 227 (288)
T PF14531_consen 150 LTVQMIRLVANLHSYGLVHGDIKPENFLLDQDGGVFLGDFSSLVRAGT--RYRCSEFPVAFTPPELESCAGQFGQNNAPY 227 (288)
T ss_dssp HHHHHHHHHHHHHHTTEEEST-SGGGEEE-TTS-EEE--GGGEEETTE--EEEGGGS-TTTS-HHHHHHHTSCHHSEEEE
T ss_pred HHHHHHHHHHHHhhcceEecccceeeEEEcCCCCEEEcChHHHeecCc--eeeccCCCcccCChhhhhhhcccCccccee
Confidence 348999999999999999999999999999999999999986654332 2222344578999998754210 012346
Q ss_pred CcchhhhhhhHHHHHHHhCCCCCCC
Q psy3880 129 GQAVDVWACGVIMYTLLVGCPPFWH 153 (408)
Q Consensus 129 ~~~~DiwSlGvil~~ll~G~~pf~~ 153 (408)
+.+.|.|++|+++|.+++|..||..
T Consensus 228 t~~~DaW~LG~~ly~lWC~~lPf~~ 252 (288)
T PF14531_consen 228 TFATDAWQLGITLYSLWCGRLPFGL 252 (288)
T ss_dssp -HHHHHHHHHHHHHHHHHSS-STCC
T ss_pred eeccCHHHHHHHHHHHHHccCCCCC
Confidence 7788999999999999999888854
No 417
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.57 E-value=1.4e-15 Score=138.82 Aligned_cols=139 Identities=18% Similarity=0.164 Sum_probs=101.3
Q ss_pred cccCCcEEEEeccCCcHHHHHHHHHhhchhhHHhhhCCHHHHHHHHHHHHHHHHHHHHCCCeeccC-CCCcEEEecCCCE
Q psy3880 7 VAHSRVVVRVKEEGDDLKHLAAQVVDKGEAAVQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDL-KPENILLDDQMNV 85 (408)
Q Consensus 7 ~~~~~~i~~~~~~~~~~~~lv~e~~~~g~~~l~~~~~~~~~~r~i~~qil~aL~~LH~~~IvHRDL-Kp~NILl~~~~~i 85 (408)
|.|+..|..+.+. +..+++|||+.|++ |...+... ...++.|++.+|++||++||+|||| ||+|||++.++.+
T Consensus 58 L~~~~~vP~ll~~--~~~~lvmeyI~G~~--L~~~~~~~--~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~~~g~i 131 (218)
T PRK12274 58 LDGLPRTPRLLHW--DGRHLDRSYLAGAA--MYQRPPRG--DLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQEDGSP 131 (218)
T ss_pred cCCCCCCCEEEEE--cCEEEEEeeecCcc--HHhhhhhh--hHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEcCCCCE
Confidence 5554555565543 23589999999988 76544222 2457889999999999999999999 7999999999999
Q ss_pred EEeccccchhcccCccc----c----------cCCCCCcccChhhhhhccccCcCCCC-cchhhhhhhHHHHHHHhCCCC
Q psy3880 86 KLTDFGFARVLKKGEKL----M----------DLCGTPGYLAPEVLRANMFEDATGYG-QAVDVWACGVIMYTLLVGCPP 150 (408)
Q Consensus 86 Kl~DFGla~~~~~~~~~----~----------~~~gt~~y~aPE~l~~~~~~~~~~~~-~~~DiwSlGvil~~ll~G~~p 150 (408)
+|+|||+|......... . -...++.|++|+.-..- ...+ ...++.+.|+-+|.++|+..+
T Consensus 132 ~LIDFG~A~~~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l-----~~~~~~~~~w~~~g~~~~~~~~~~~~ 206 (218)
T PRK12274 132 AVIDFQLAVRGNPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVL-----KRTSWIRELWFATGKPVYRFVTRRVL 206 (218)
T ss_pred EEEECCCceecCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhh-----ccchhHHHHHHHhcchHHHHHhccCC
Confidence 99999999854433211 0 02367889999754321 1112 456788999999999999999
Q ss_pred CCCchh
Q psy3880 151 FWHRKQ 156 (408)
Q Consensus 151 f~~~~~ 156 (408)
++++++
T Consensus 207 ~~~~~~ 212 (218)
T PRK12274 207 HWEDNE 212 (218)
T ss_pred ccccCC
Confidence 877653
No 418
>KOG0606|consensus
Probab=99.49 E-value=2.9e-14 Score=152.05 Aligned_cols=228 Identities=26% Similarity=0.408 Sum_probs=154.7
Q ss_pred cccCCcEEEEecc--CCcHHHHHHHHHhhchhhHHhhhCC-----HHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEE
Q psy3880 7 VAHSRVVVRVKEE--GDDLKHLAAQVVDKGEAAVQDIINS-----NPALRYIMRQLFEALEHVHNHSVVHRDLKPENILL 79 (408)
Q Consensus 7 ~~~~~~i~~~~~~--~~~~~~lv~e~~~~g~~~l~~~~~~-----~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl 79 (408)
..|++++++.... -.+..+|+++|+.||. |+..+.. .+-+|.++..+..++++||+..++|||++|.|+|.
T Consensus 860 ~p~~P~v~~~~~s~~~rsP~~L~~~~~~~~~--~~Skl~~~~~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~ 937 (1205)
T KOG0606|consen 860 TPRSPAVVRSFPSFPCRSPLPLVGHYLNGGD--LPSKLHNSGCLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLI 937 (1205)
T ss_pred cCCCCceecccCCCCCCCCcchhhHHhccCC--chhhhhcCCCcccccccchhHHHHhhhhccccchhhcccccccchhh
Confidence 3677888877765 5567899999999988 8777543 24678888889999999999999999999999999
Q ss_pred ecCCCEEEeccccchhcccCcccc-----cCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCc
Q psy3880 80 DDQMNVKLTDFGFARVLKKGEKLM-----DLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHR 154 (408)
Q Consensus 80 ~~~~~iKl~DFGla~~~~~~~~~~-----~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~ 154 (408)
..++..+++|||.......-.... ...|++...++-.-..+ ... |
T Consensus 938 ~~~gh~~l~~~~t~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~-------l~~--~--------------------- 987 (1205)
T KOG0606|consen 938 AYDGHRPLTDFGTLSKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQ-------LSA--D--------------------- 987 (1205)
T ss_pred cccCCcccCccccccccccccCcCCcccccccCccccccccccccc-------ccc--c---------------------
Confidence 999999999998544322110000 01122222111100000 000 0
Q ss_pred hhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHH
Q psy3880 155 KQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIM 234 (408)
Q Consensus 155 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~ 234 (408)
... ..-.......|.+||.+... .-+..+|+|+.|+++++.++|.+||........+++|.
T Consensus 988 ------~~~-------~~~~~~~t~~~laPe~~lg~------~hgs~ad~~~~g~~l~e~l~g~pp~na~tpq~~f~ni~ 1048 (1205)
T KOG0606|consen 988 ------EAR-------RKHAVVGTPDYLAPEILLGR------RHGSAADWWSSGVCLFEVLTGIPPFNAETPQQIFENIL 1048 (1205)
T ss_pred ------hhh-------ccccccCCCcccCCcccccc------cCCCcchhhhhhhhhhhhhcCCCCCCCcchhhhhhccc
Confidence 000 00001223345566655432 23557788888888888888888888888778888887
Q ss_pred hcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHH---HHHcCCCCCCCCCCC
Q psy3880 235 EGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVK---EALNHSFFHPKLFDQ 286 (408)
Q Consensus 235 ~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~---e~L~Hpwf~~~~~~~ 286 (408)
.+...++... ...++++++++.++|.-+|.+|.++. +.-.||||++..++.
T Consensus 1049 ~~~~~~p~g~-~~~s~~aq~~~~~ll~~~~~qr~~a~~~~e~k~~~~~~~~~~~~ 1102 (1205)
T KOG0606|consen 1049 NRDIPWPEGP-EEGSYEAQDLINRLLTEEPTQRLGAKGAAEVKGHPFFQDVDWEN 1102 (1205)
T ss_pred cCCCCCCCCc-cccChhhhhhhhhhhccCchhccCcccccccccCCccCCCCccc
Confidence 7766554322 35789999999999999999999877 999999999876543
No 419
>KOG1164|consensus
Probab=99.45 E-value=3.2e-13 Score=132.76 Aligned_cols=138 Identities=24% Similarity=0.335 Sum_probs=103.5
Q ss_pred EEEEeccC---CcHHHHHHHHHhhchhhHHhhh----CCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEecC---
Q psy3880 13 VVRVKEEG---DDLKHLAAQVVDKGEAAVQDII----NSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQ--- 82 (408)
Q Consensus 13 i~~~~~~~---~~~~~lv~e~~~~g~~~l~~~~----~~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl~~~--- 82 (408)
+..+...+ .++.|+||+++-..-..|.... .+..++..++.|++.+|++||+.|++||||||+|+++...
T Consensus 82 ~~~~~~~G~~~~~~~~iVM~l~G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~ 161 (322)
T KOG1164|consen 82 FPKLLDHGRSTEDFNFIVMSLLGPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRS 161 (322)
T ss_pred CCEEEEeccCCCceeEEEEeccCccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCc
Confidence 43444433 4567889888754433333222 2458899999999999999999999999999999999754
Q ss_pred --CCEEEeccccchhcc---cCc-------c-cccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCC
Q psy3880 83 --MNVKLTDFGFARVLK---KGE-------K-LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCP 149 (408)
Q Consensus 83 --~~iKl~DFGla~~~~---~~~-------~-~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~ 149 (408)
..+.|.|||+|+... ... . .....||..|.++..-.+ ...+.+-|+||++-++.++..|..
T Consensus 162 ~~~~~~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~------~e~~r~DDles~~Y~l~el~~g~L 235 (322)
T KOG1164|consen 162 EVRTLYLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLG------IEQGRRDDLESLFYMLLELLKGSL 235 (322)
T ss_pred ccceEEEEecCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCC------CccCCchhhhhHHHHHHHHhcCCC
Confidence 468999999998322 111 0 122459999999997654 346789999999999999999999
Q ss_pred CCCCchh
Q psy3880 150 PFWHRKQ 156 (408)
Q Consensus 150 pf~~~~~ 156 (408)
||.+...
T Consensus 236 PW~~~~~ 242 (322)
T KOG1164|consen 236 PWEALEM 242 (322)
T ss_pred CCccccc
Confidence 9977653
No 420
>KOG1165|consensus
Probab=99.43 E-value=3.1e-13 Score=128.43 Aligned_cols=153 Identities=22% Similarity=0.328 Sum_probs=116.4
Q ss_pred cccCCcEEEEeccCCcHH--HHHHHHHhhchhhHHhhhC---CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEec
Q psy3880 7 VAHSRVVVRVKEEGDDLK--HLAAQVVDKGEAAVQDIIN---SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDD 81 (408)
Q Consensus 7 ~~~~~~i~~~~~~~~~~~--~lv~e~~~~g~~~l~~~~~---~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl~~ 81 (408)
|.+..-|-.+++-+..-. .||+|++---.+.|||+-. +.+++.-++.|++.-++|+|++..|.|||||+|+||..
T Consensus 80 L~g~~GIP~vYYFGqeG~~NiLVidLLGPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGr 159 (449)
T KOG1165|consen 80 LGGTEGIPQVYYFGQEGKYNILVIDLLGPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGR 159 (449)
T ss_pred HcCCCCCCceeeeccccchhhhhhhhhCcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecC
Confidence 344445655666554434 4999998555566777643 45899999999999999999999999999999999964
Q ss_pred C-----CCEEEeccccchhcccCcc--------cccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCC
Q psy3880 82 Q-----MNVKLTDFGFARVLKKGEK--------LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGC 148 (408)
Q Consensus 82 ~-----~~iKl~DFGla~~~~~~~~--------~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~ 148 (408)
. ..|.++|||+|+.+.+... ..+..||..||+--.-.+ ...+.+-|+=|||-++.+.|.|.
T Consensus 160 p~~k~~n~IhiiDFGmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlG------rEQSRRDDLEaLGHvFmYFLRGs 233 (449)
T KOG1165|consen 160 PGTKDANVIHIIDFGMAKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLG------REQSRRDDLEALGHVFMYFLRGS 233 (449)
T ss_pred CCCCCCceEEEEeccchhhhcCccccccCccccccccccceeeeEeecccc------chhhhhhhHHHhhhhhhhhccCC
Confidence 3 3589999999998765432 245789999998765443 23467899999999999999999
Q ss_pred CCCCCch---hHHHHHHHHh
Q psy3880 149 PPFWHRK---QMVMLRNIME 165 (408)
Q Consensus 149 ~pf~~~~---~~~~~~~i~~ 165 (408)
.||.+-+ ..+-.++|-.
T Consensus 234 LPWQGLKA~tnK~kYeKIGe 253 (449)
T KOG1165|consen 234 LPWQGLKADTNKEKYEKIGE 253 (449)
T ss_pred CccccccCcchHHHHHHhcc
Confidence 9998753 4555556543
No 421
>KOG1023|consensus
Probab=99.38 E-value=3.6e-13 Score=136.76 Aligned_cols=145 Identities=24% Similarity=0.390 Sum_probs=104.9
Q ss_pred ccccCCcEEEEec--cCCcHHHHHHHHHhhchhhHHhhhCCH------HHHHHHHHHHHHHHHHHHHCCC-eeccCCCCc
Q psy3880 6 MVAHSRVVVRVKE--EGDDLKHLAAQVVDKGEAAVQDIINSN------PALRYIMRQLFEALEHVHNHSV-VHRDLKPEN 76 (408)
Q Consensus 6 ~~~~~~~i~~~~~--~~~~~~~lv~e~~~~g~~~l~~~~~~~------~~~r~i~~qil~aL~~LH~~~I-vHRDLKp~N 76 (408)
.+.|+|+. .+.. -.......|-+||..|. |+|.+..+ -=.-.+++.|+.||+|||+-.| .|..|+..|
T Consensus 3 ~l~h~n~~-~f~g~~~~~~~~~~i~~~c~rGs--l~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~n 79 (484)
T KOG1023|consen 3 QLDHDNLN-KFIGASVDGPEMIVIWEYCSRGS--LLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSN 79 (484)
T ss_pred ccchhhhh-hheeeEecCCceEEEEeeecCcc--HHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeecccc
Confidence 36788744 5544 22355678899999999 99988653 2235567889999999998877 999999999
Q ss_pred EEEecCCCEEEeccccchhcccCc---ccccCCCCCcccChhhhhhccccCc-CCCCcchhhhhhhHHHHHHHhCCCCCC
Q psy3880 77 ILLDDQMNVKLTDFGFARVLKKGE---KLMDLCGTPGYLAPEVLRANMFEDA-TGYGQAVDVWACGVIMYTLLVGCPPFW 152 (408)
Q Consensus 77 ILl~~~~~iKl~DFGla~~~~~~~---~~~~~~gt~~y~aPE~l~~~~~~~~-~~~~~~~DiwSlGvil~~ll~G~~pf~ 152 (408)
++++..-.+|++|||+........ ......-..-|.|||.+........ ..-+.+.|+||+|++++|+++...||.
T Consensus 80 Clvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~ 159 (484)
T KOG1023|consen 80 CLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFD 159 (484)
T ss_pred ceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCccc
Confidence 999999999999999987654210 0011122346899999976422110 113567899999999999999888886
Q ss_pred C
Q psy3880 153 H 153 (408)
Q Consensus 153 ~ 153 (408)
.
T Consensus 160 ~ 160 (484)
T KOG1023|consen 160 L 160 (484)
T ss_pred c
Confidence 5
No 422
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.38 E-value=7e-14 Score=129.97 Aligned_cols=99 Identities=13% Similarity=0.220 Sum_probs=74.2
Q ss_pred HHHHHHHHHhhchhhHHhhhCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEecCCCEEEeccccchhcccCccc
Q psy3880 23 LKHLAAQVVDKGEAAVQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKL 102 (408)
Q Consensus 23 ~~~lv~e~~~~g~~~l~~~~~~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl~~~~~iKl~DFGla~~~~~~~~~ 102 (408)
..+|||||++|.. |.+.....+ ..+.+++.+|..||+.|++|||+||+||+++.++ ++|+|||...........
T Consensus 117 ~~~lvmEyi~G~t--L~~~~~~~~---~~~~~i~~~l~~lH~~gi~H~Dikp~Nili~~~g-i~liDfg~~~~~~e~~a~ 190 (232)
T PRK10359 117 TYIMLIEYIEGVE--LNDMPEISE---DVKAKIKASIESLHQHGMVSGDPHKGNFIVSKNG-LRIIDLSGKRCTAQRKAK 190 (232)
T ss_pred CeEEEEEEECCcc--HHHhhhccH---HHHHHHHHHHHHHHHcCCccCCCChHHEEEeCCC-EEEEECCCcccccchhhH
Confidence 4679999999987 766533222 3466999999999999999999999999999888 999999987654322111
Q ss_pred ccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHH
Q psy3880 103 MDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTL 144 (408)
Q Consensus 103 ~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~l 144 (408)
..++.. ..|+.++|+||||+++...
T Consensus 191 -----------d~~vle------r~y~~~~di~~lg~~~~~~ 215 (232)
T PRK10359 191 -----------DRIDLE------RHYGIKNEIKDLGYYLLIY 215 (232)
T ss_pred -----------HHHHHH------hHhcccccccceeEeehHH
Confidence 012222 3466789999999987654
No 423
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.36 E-value=1.2e-13 Score=125.66 Aligned_cols=69 Identities=16% Similarity=0.182 Sum_probs=58.7
Q ss_pred HHHHHHHhhchhhHHh-----hhCCHHHHHHHHHHHHHHHHHH-HHCCCeeccCCCCcEEEecCCCEEEeccccchhc
Q psy3880 25 HLAAQVVDKGEAAVQD-----IINSNPALRYIMRQLFEALEHV-HNHSVVHRDLKPENILLDDQMNVKLTDFGFARVL 96 (408)
Q Consensus 25 ~lv~e~~~~g~~~l~~-----~~~~~~~~r~i~~qil~aL~~L-H~~~IvHRDLKp~NILl~~~~~iKl~DFGla~~~ 96 (408)
+|||||+.|+. +.. ...+..++..++.|++.+|.++ |+.||+||||||+|||++ ++.++|+|||+|...
T Consensus 93 ~iVmE~i~g~~--l~~~~~~~~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~-~~~v~LiDFG~a~~~ 167 (190)
T cd05147 93 VLVMEFIGDDG--WAAPRLKDAPLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLYH-DGKLYIIDVSQSVEH 167 (190)
T ss_pred EEEEEEeCCCC--CcchhhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEE-CCcEEEEEccccccC
Confidence 79999999875 322 2234578999999999999999 799999999999999998 478999999998654
No 424
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.35 E-value=2.7e-13 Score=123.10 Aligned_cols=73 Identities=19% Similarity=0.257 Sum_probs=60.1
Q ss_pred HHHHHHHHhhchhh---HHhhhCCHHHHHHHHHHHHHHHHHHHH-CCCeeccCCCCcEEEecCCCEEEeccccchhcc
Q psy3880 24 KHLAAQVVDKGEAA---VQDIINSNPALRYIMRQLFEALEHVHN-HSVVHRDLKPENILLDDQMNVKLTDFGFARVLK 97 (408)
Q Consensus 24 ~~lv~e~~~~g~~~---l~~~~~~~~~~r~i~~qil~aL~~LH~-~~IvHRDLKp~NILl~~~~~iKl~DFGla~~~~ 97 (408)
.+|||||+.|+... +.+.-.+..++..++.|++.+|.++|+ +||+||||||+|||++ ++.++|+|||+|..+.
T Consensus 92 ~~lVmE~~~g~~~~~~~l~~~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll~-~~~~~liDFG~a~~~~ 168 (190)
T cd05145 92 NVLVMEFIGDDGSPAPRLKDVPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILYH-DGKPYIIDVSQAVELD 168 (190)
T ss_pred CEEEEEEecCCCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEEE-CCCEEEEEcccceecC
Confidence 37999999987411 112123456889999999999999999 9999999999999998 7899999999997654
No 425
>KOG1163|consensus
Probab=99.33 E-value=2.7e-12 Score=117.38 Aligned_cols=141 Identities=21% Similarity=0.311 Sum_probs=103.9
Q ss_pred cHHHHHHHHHhhchhhHHhhhC---CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEecC---CCEEEeccccchh
Q psy3880 22 DLKHLAAQVVDKGEAAVQDIIN---SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQ---MNVKLTDFGFARV 95 (408)
Q Consensus 22 ~~~~lv~e~~~~g~~~l~~~~~---~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl~~~---~~iKl~DFGla~~ 95 (408)
+.-.+|||++----+.||..-. +-+++.-++-|++.-++|+|.++.|||||||+|+|..-+ ..+-++|||+|+.
T Consensus 84 ~ynvlVMdLLGPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKk 163 (341)
T KOG1163|consen 84 DYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKK 163 (341)
T ss_pred ccceeeeeccCccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEeccchhh
Confidence 3445788877444344544432 236777888999999999999999999999999999643 4688999999987
Q ss_pred cccCcc--------cccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCch---hHHHHHHHH
Q psy3880 96 LKKGEK--------LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRK---QMVMLRNIM 164 (408)
Q Consensus 96 ~~~~~~--------~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~---~~~~~~~i~ 164 (408)
+.+... -....||..|.+--...+ ...+.+-|+=|+|-++.+...|..||++-. ..+-..+|.
T Consensus 164 y~d~~t~~HIpyre~r~ltGTaRYASinAh~g------~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~ 237 (341)
T KOG1163|consen 164 YRDIRTRQHIPYREDRNLTGTARYASINAHLG------IEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKIS 237 (341)
T ss_pred hccccccccCccccCCccceeeeehhhhhhhh------hhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHHH
Confidence 654321 134679999988765543 123568899999999999999999998854 455556666
Q ss_pred hccc
Q psy3880 165 EGKY 168 (408)
Q Consensus 165 ~~~~ 168 (408)
+.+.
T Consensus 238 EkK~ 241 (341)
T KOG1163|consen 238 EKKM 241 (341)
T ss_pred Hhhc
Confidence 6543
No 426
>KOG0605|consensus
Probab=99.23 E-value=9.9e-12 Score=124.63 Aligned_cols=69 Identities=42% Similarity=0.768 Sum_probs=60.7
Q ss_pred ccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHHHHHHHHhccccCCCCCCcc
Q psy3880 103 MDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWND 177 (408)
Q Consensus 103 ~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 177 (408)
...+|||-|+|||++.+ .+|+..||+||||||+||||.|.+||.+++..+..++|...+-.+..|.-..
T Consensus 346 ~StVGTPDYiAPEVll~------kgY~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~~~ 414 (550)
T KOG0605|consen 346 YSTVGTPDYIAPEVLLG------KGYGKECDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPEEVD 414 (550)
T ss_pred hcccCCccccchHHHhc------CCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCcCc
Confidence 34789999999999986 5799999999999999999999999999999999999999886665555433
No 427
>PRK10345 hypothetical protein; Provisional
Probab=99.21 E-value=4.4e-12 Score=116.94 Aligned_cols=84 Identities=18% Similarity=0.141 Sum_probs=60.4
Q ss_pred cccCCcEEEEeccCCc-----HHH-HHHHH--HhhchhhHHhhhCCH--HHHHHHHHHHHHHH-HHHHHCCCeeccCCCC
Q psy3880 7 VAHSRVVVRVKEEGDD-----LKH-LAAQV--VDKGEAAVQDIINSN--PALRYIMRQLFEAL-EHVHNHSVVHRDLKPE 75 (408)
Q Consensus 7 ~~~~~~i~~~~~~~~~-----~~~-lv~e~--~~~g~~~l~~~~~~~--~~~r~i~~qil~aL-~~LH~~~IvHRDLKp~ 75 (408)
..|+| |+++++...+ ..+ +|+|| +.+|. |.+.+... ++...++.|++.++ +|||+++||||||||+
T Consensus 58 ~~h~n-Ivr~yg~~et~~g~g~v~~~I~e~~G~~~~t--L~~~l~~~~~~e~~~~~~~~L~~l~~yLh~~~IvhrDlKp~ 134 (210)
T PRK10345 58 IDWSG-IPRYYGTVETDCGTGYVYDVIADFDGKPSIT--LTEFAEQCRYEEDVAQLRQLLKKLKRYLLDNRIVTMELKPQ 134 (210)
T ss_pred CCCcc-cceeeEEEEeCCCCeEEEEEEecCCCCcchh--HHHHHHcccccHhHHHHHHHHHHHHHHHHHCCEeecCCCHH
Confidence 36787 5577653222 223 78999 44677 88887532 22245688888888 9999999999999999
Q ss_pred cEEEecC----CCEEEeccccc
Q psy3880 76 NILLDDQ----MNVKLTDFGFA 93 (408)
Q Consensus 76 NILl~~~----~~iKl~DFGla 93 (408)
|||++.. ..++|+||+.+
T Consensus 135 NILl~~~~~~~~~~~LiDg~G~ 156 (210)
T PRK10345 135 NILCQRISESEVIPVVCDNIGE 156 (210)
T ss_pred HEEEeccCCCCCcEEEEECCCC
Confidence 9999743 37999995433
No 428
>KOG0195|consensus
Probab=99.16 E-value=5.1e-11 Score=110.68 Aligned_cols=143 Identities=13% Similarity=0.293 Sum_probs=101.1
Q ss_pred ccccCCcEEEEec-cCCcHHHHHHHHHhhchhhHHhhhCCH-------HHHHHHHHHHHHHHHHHHHCC--CeeccCCCC
Q psy3880 6 MVAHSRVVVRVKE-EGDDLKHLAAQVVDKGEAAVQDIINSN-------PALRYIMRQLFEALEHVHNHS--VVHRDLKPE 75 (408)
Q Consensus 6 ~~~~~~~i~~~~~-~~~~~~~lv~e~~~~g~~~l~~~~~~~-------~~~r~i~~qil~aL~~LH~~~--IvHRDLKp~ 75 (408)
..+|||+...+.+ ...-...++.+||.-|. |+..+... .++..++-.++.|+.|||+.. |.---|...
T Consensus 243 ifshpnilpvlgacnsppnlv~isq~mp~gs--lynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~ 320 (448)
T KOG0195|consen 243 IFSHPNILPVLGACNSPPNLVIISQYMPFGS--LYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSK 320 (448)
T ss_pred eecCCchhhhhhhccCCCCceEeeeeccchH--HHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccc
Confidence 4679986655544 33345668889999998 88877543 677888999999999999864 444467778
Q ss_pred cEEEecCCCEEE--eccccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCC
Q psy3880 76 NILLDDQMNVKL--TDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH 153 (408)
Q Consensus 76 NILl~~~~~iKl--~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~ 153 (408)
.++++++.+.+| +|--++. ......-+|.||+||.+....-+ .--.++|+|||.+++||+-|...||.+
T Consensus 321 hvmidedltarismad~kfsf------qe~gr~y~pawmspealqrkped---~n~raadmwsfaillwel~trevpfad 391 (448)
T KOG0195|consen 321 HVMIDEDLTARISMADTKFSF------QEVGRAYSPAWMSPEALQRKPED---LNIRAADMWSFAILLWELNTREVPFAD 391 (448)
T ss_pred eEEecchhhhheecccceeee------eccccccCcccCCHHHHhcCchh---cchhhhhHHHHHHHHHHhhcccccccc
Confidence 899988876554 3432221 11234557899999999764321 123579999999999999999999976
Q ss_pred chhHHH
Q psy3880 154 RKQMVM 159 (408)
Q Consensus 154 ~~~~~~ 159 (408)
-+..+.
T Consensus 392 lspmec 397 (448)
T KOG0195|consen 392 LSPMEC 397 (448)
T ss_pred CCchhh
Confidence 554443
No 429
>KOG1166|consensus
Probab=99.12 E-value=4.7e-11 Score=129.52 Aligned_cols=122 Identities=24% Similarity=0.375 Sum_probs=103.7
Q ss_pred CCcHHHHHHHHHhhchhhHHhhhCCH-----HHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEec-------CCCEEE
Q psy3880 20 GDDLKHLAAQVVDKGEAAVQDIINSN-----PALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDD-------QMNVKL 87 (408)
Q Consensus 20 ~~~~~~lv~e~~~~g~~~l~~~~~~~-----~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl~~-------~~~iKl 87 (408)
+.|--+||+||-+-|. |.|.++.. --+.++..|+|.-|++||..+|||.||||+|+||.. +..++|
T Consensus 765 ~~~~S~lv~ey~~~Gt--lld~~N~~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~l 842 (974)
T KOG1166|consen 765 FQNASVLVSEYSPYGT--LLDLINTNKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYL 842 (974)
T ss_pred cCCcceeeeecccccc--HHHhhccCCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEE
Confidence 4555678999999998 99998754 567889999999999999999999999999999942 346999
Q ss_pred eccccchhcc---cCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCC
Q psy3880 88 TDFGFARVLK---KGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCP 149 (408)
Q Consensus 88 ~DFGla~~~~---~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~ 149 (408)
+|||.+.-+. ++..+...++|-.+-++|+..+ .+++..+|.+.+..+++.||.|+.
T Consensus 843 IDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~g------rpWtYq~DyfGlAa~~h~mLFG~y 901 (974)
T KOG1166|consen 843 IDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREG------RPWTYQIDYFGLAATVHVMLFGKY 901 (974)
T ss_pred EecccceeeeEcCCCcEEeeeeccccchhHHHhcC------CCCchhhhhHHHHHHHHHHHHHHH
Confidence 9999986543 4556778899999999999864 578899999999999999999964
No 430
>PF01585 G-patch: G-patch domain; InterPro: IPR000467 The D111/G-patch domain [] is a short conserved region of about 40 amino acids which occurs in a number of putative RNA-binding proteins, including tumor suppressor and DNA-damage-repair proteins, suggesting that this domain may have an RNA binding function. This domain has seven highly conserved glycines. A multiple alignment of a small subset of D111/G-patch domains is shown in Fig. 2b of [].; GO: 0003676 nucleic acid binding, 0005622 intracellular
Probab=99.10 E-value=5.3e-11 Score=81.78 Aligned_cols=32 Identities=47% Similarity=1.165 Sum_probs=30.7
Q ss_pred cchhHHHHHhcCCCCCCCCCCCCCCccccccc
Q psy3880 375 DNVGFKMLQKLGWQEGSGLGTDGGGIQEPVNK 406 (408)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (408)
+|+|++||++|||++|+|||++.+||++||+.
T Consensus 2 ~~~g~~lm~kmGw~~G~GLGk~~~G~~~pi~~ 33 (45)
T PF01585_consen 2 SSIGFKLMKKMGWKPGQGLGKNGQGIAEPIEV 33 (45)
T ss_pred CcHHHHHHHHCCCCCCcCCCcCCccCCcceEE
Confidence 68999999999999999999999999999975
No 431
>smart00090 RIO RIO-like kinase.
Probab=99.10 E-value=2.4e-11 Score=114.34 Aligned_cols=71 Identities=17% Similarity=0.215 Sum_probs=59.5
Q ss_pred HHHHHHHHhhchhhHHhhh-----CCHHHHHHHHHHHHHHHHHHHHCC-CeeccCCCCcEEEecCCCEEEeccccchhcc
Q psy3880 24 KHLAAQVVDKGEAAVQDII-----NSNPALRYIMRQLFEALEHVHNHS-VVHRDLKPENILLDDQMNVKLTDFGFARVLK 97 (408)
Q Consensus 24 ~~lv~e~~~~g~~~l~~~~-----~~~~~~r~i~~qil~aL~~LH~~~-IvHRDLKp~NILl~~~~~iKl~DFGla~~~~ 97 (408)
.+|||||+.|+. +.... ....+++.++.||+.+|.+||++| |+||||||+||+++ ++.++|+|||.|....
T Consensus 123 ~~lV~E~~~g~~--L~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIli~-~~~i~LiDFg~a~~~~ 199 (237)
T smart00090 123 NVLVMEFIGGDG--LPAPRLKDVEPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNILVH-DGKVVIIDVSQSVELD 199 (237)
T ss_pred ceEEEEEecCCc--ccccccccCCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhEEEE-CCCEEEEEChhhhccC
Confidence 479999999976 43332 223567889999999999999999 99999999999999 7899999999887543
No 432
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.08 E-value=3.2e-11 Score=113.62 Aligned_cols=69 Identities=20% Similarity=0.349 Sum_probs=56.0
Q ss_pred HHHHHHHhhc-hhhHHhhhCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEecCCCEEEeccccchh
Q psy3880 25 HLAAQVVDKG-EAAVQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARV 95 (408)
Q Consensus 25 ~lv~e~~~~g-~~~l~~~~~~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl~~~~~iKl~DFGla~~ 95 (408)
++|+|+++|+ . |.+.+...+.....+.||+.+|.+||++||+||||||+|||++.++.++|+|||.+..
T Consensus 122 ~lV~e~l~G~~~--L~~~l~~~~l~~~~~~~i~~~l~~lH~~GI~HrDlkp~NILv~~~~~v~LIDfg~~~~ 191 (239)
T PRK01723 122 DILIERIEGARD--LVALLQEAPLSEEQWQAIGQLIARFHDAGVYHADLNAHNILLDPDGKFWLIDFDRGEL 191 (239)
T ss_pred eEEEEecCCCCC--HHHHHhcCCCCHHHHHHHHHHHHHHHHCCCCCCCCCchhEEEcCCCCEEEEECCCccc
Confidence 3999999874 5 6666543221223467999999999999999999999999999888999999998765
No 433
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.07 E-value=4.5e-11 Score=125.50 Aligned_cols=85 Identities=18% Similarity=0.354 Sum_probs=69.0
Q ss_pred ccccCCcEEE-EeccCCcHHHHHHHHHhhchhhHHhhhCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEecCCC
Q psy3880 6 MVAHSRVVVR-VKEEGDDLKHLAAQVVDKGEAAVQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMN 84 (408)
Q Consensus 6 ~~~~~~~i~~-~~~~~~~~~~lv~e~~~~g~~~l~~~~~~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl~~~~~ 84 (408)
.+.|+++++. ++....+..++||||+.|+. |.+.+. ....++.|++.+|.+||++||+||||||+|||+ +++.
T Consensus 392 ~l~~~~i~~p~~~~~~~~~~~lv~E~~~g~~--L~~~l~---~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl-~~~~ 465 (535)
T PRK09605 392 EARRAGVPTPVIYDVDPEEKTIVMEYIGGKD--LKDVLE---GNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIV-RDDR 465 (535)
T ss_pred hhcccCCCeeEEEEEeCCCCEEEEEecCCCc--HHHHHH---HHHHHHHHHHHHHHHHHhCCCccCCCChHHEEE-ECCc
Confidence 3567775543 33344455689999999998 877664 467789999999999999999999999999999 5778
Q ss_pred EEEeccccchhc
Q psy3880 85 VKLTDFGFARVL 96 (408)
Q Consensus 85 iKl~DFGla~~~ 96 (408)
++|+|||+|+..
T Consensus 466 ~~liDFGla~~~ 477 (535)
T PRK09605 466 LYLIDFGLGKYS 477 (535)
T ss_pred EEEEeCcccccC
Confidence 999999998764
No 434
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.06 E-value=3.5e-11 Score=109.45 Aligned_cols=76 Identities=22% Similarity=0.432 Sum_probs=63.0
Q ss_pred EEeccCCcHHHHHHHHHhhchhhHHhhhCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEecCCCEEEeccccch
Q psy3880 15 RVKEEGDDLKHLAAQVVDKGEAAVQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFAR 94 (408)
Q Consensus 15 ~~~~~~~~~~~lv~e~~~~g~~~l~~~~~~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl~~~~~iKl~DFGla~ 94 (408)
.+....++..++||||+.|+. |.+.+..... .++.|++.+|.+||+.|++|+|++|.||+++ ++.++++|||++.
T Consensus 63 ~~~~~~~~~~~lv~e~~~g~~--l~~~~~~~~~--~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~ 137 (199)
T TIGR03724 63 VVYDVDPDNKTIVMEYIEGKP--LKDVIEEGND--ELLREIGRLVGKLHKAGIVHGDLTTSNIIVR-DDKLYLIDFGLGK 137 (199)
T ss_pred EEEEEECCCCEEEEEEECCcc--HHHHHhhcHH--HHHHHHHHHHHHHHHCCeecCCCCcceEEEE-CCcEEEEECCCCc
Confidence 334444555689999999998 7776644322 7899999999999999999999999999999 7899999999886
Q ss_pred h
Q psy3880 95 V 95 (408)
Q Consensus 95 ~ 95 (408)
.
T Consensus 138 ~ 138 (199)
T TIGR03724 138 Y 138 (199)
T ss_pred C
Confidence 5
No 435
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.06 E-value=5.2e-11 Score=108.62 Aligned_cols=72 Identities=18% Similarity=0.278 Sum_probs=61.3
Q ss_pred HHHHHHHHHhhchhhHHhhhCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEecCCCEEEeccccchhcc
Q psy3880 23 LKHLAAQVVDKGEAAVQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLK 97 (408)
Q Consensus 23 ~~~lv~e~~~~g~~~l~~~~~~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl~~~~~iKl~DFGla~~~~ 97 (408)
..++||||+.|+. |.+... .+....++.+++.++.++|+.||+||||||+||+++.++.++|+|||.+....
T Consensus 105 ~~~lv~e~~~g~~--L~~~~~-~~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill~~~~~~~liDfg~~~~~~ 176 (198)
T cd05144 105 RHAVVMEYIDGVE--LYRVRV-LEDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILVDDDEKIYIIDWPQMVSTD 176 (198)
T ss_pred CceEEEEEeCCcc--hhhccc-cccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEEcCCCcEEEEECCccccCC
Confidence 3478999999987 655433 24567788999999999999999999999999999999999999999986544
No 436
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.01 E-value=9.6e-11 Score=107.43 Aligned_cols=73 Identities=23% Similarity=0.397 Sum_probs=62.5
Q ss_pred CCcHHHHHHHHHhhchhhHHhhhCCH-HHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEecCCCEEEeccccchh
Q psy3880 20 GDDLKHLAAQVVDKGEAAVQDIINSN-PALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARV 95 (408)
Q Consensus 20 ~~~~~~lv~e~~~~g~~~l~~~~~~~-~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl~~~~~iKl~DFGla~~ 95 (408)
+.+..+++|||+.|+. |.+.+... .+...++.+++.+|.++|+.|++|+|++|.|||++ ++.++|+|||++..
T Consensus 70 ~~~~~~lv~e~~~G~~--L~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 70 DPENFIIVMEYIEGEP--LKDLINSNGMEELELSREIGRLVGKLHSAGIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred eCCCCEEEEEEeCCcC--HHHHHHhccHHHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 4455789999999988 77766432 36778899999999999999999999999999999 78899999998864
No 437
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=98.95 E-value=2.1e-10 Score=103.08 Aligned_cols=72 Identities=21% Similarity=0.260 Sum_probs=57.9
Q ss_pred HHHHHHHHhhch---hhHHhhhCCHHHHHHHHHHHHHHHHHHHH-CCCeeccCCCCcEEEecCCCEEEeccccchhcc
Q psy3880 24 KHLAAQVVDKGE---AAVQDIINSNPALRYIMRQLFEALEHVHN-HSVVHRDLKPENILLDDQMNVKLTDFGFARVLK 97 (408)
Q Consensus 24 ~~lv~e~~~~g~---~~l~~~~~~~~~~r~i~~qil~aL~~LH~-~~IvHRDLKp~NILl~~~~~iKl~DFGla~~~~ 97 (408)
.++||||+.||. ..|.+... ..+++.++.+++.++.++|+ +||+||||||+||+++ ++.++++|||.+....
T Consensus 90 ~~lv~e~~~g~~~~~~~l~~~~~-~~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili~-~~~~~liDfg~a~~~~ 165 (187)
T cd05119 90 HVLVMEFIGGDGIPAPRLKDVRL-LEDPEELYDQILELMRKLYREAGLVHGDLSEYNILVD-DGKVYIIDVPQAVEID 165 (187)
T ss_pred CEEEEEEeCCCCccChhhhhhhh-cccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEEE-CCcEEEEECccccccc
Confidence 367888888853 01322222 16788999999999999999 9999999999999999 8899999999986543
No 438
>smart00443 G_patch glycine rich nucleic binding domain. A predicted glycine rich nucleic binding domain found in the splicing factor 45, SON DNA binding protein and D-type Retrovirus- polyproteins.
Probab=98.92 E-value=8e-10 Score=76.89 Aligned_cols=35 Identities=46% Similarity=1.082 Sum_probs=32.4
Q ss_pred ccccchhHHHHHhcCCCCCCCCCCCCCCccccccc
Q psy3880 372 LKEDNVGFKMLQKLGWQEGSGLGTDGGGIQEPVNK 406 (408)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (408)
++.+|+|++||++|||++|+|||++.+||++||..
T Consensus 1 ~~~~~~g~~~l~~mGw~~G~GLG~~~~g~~~pi~~ 35 (47)
T smart00443 1 ISTSNIGYKLLRKMGWKEGQGLGKNEQGIVEPISA 35 (47)
T ss_pred CCcccHHHHHHHHcCCCCCCcCCCCCCcCccceeE
Confidence 46789999999999999999999999999999854
No 439
>KOG0610|consensus
Probab=98.91 E-value=1.1e-09 Score=107.24 Aligned_cols=64 Identities=41% Similarity=0.734 Sum_probs=57.7
Q ss_pred ccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHHHHHHHHhccccCCC
Q psy3880 103 MDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSS 172 (408)
Q Consensus 103 ~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~~~~~i~~~~~~~~~ 172 (408)
...+||..|+|||++.+ .+++.++|+|+|||++|||+.|..||.+.+..+.+.+|+.....|..
T Consensus 293 nSFVGThEYlAPEvI~G------~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~ 356 (459)
T KOG0610|consen 293 NSFVGTHEYLAPEVIRG------EGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPE 356 (459)
T ss_pred cccccccccccceeeec------CCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCC
Confidence 45889999999999986 57899999999999999999999999999999999999987766543
No 440
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=98.90 E-value=2.3e-09 Score=115.54 Aligned_cols=138 Identities=28% Similarity=0.498 Sum_probs=106.1
Q ss_pred eeccCCCC-cEEEecCCCEEEeccccchhcccCcc---cccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHH
Q psy3880 68 VHRDLKPE-NILLDDQMNVKLTDFGFARVLKKGEK---LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYT 143 (408)
Q Consensus 68 vHRDLKp~-NILl~~~~~iKl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ 143 (408)
.|++.+|. |++++..+..++.|||.++....+.. ....+||+.|+|||++.+ ..|+.++||||+||++|+
T Consensus 499 ~~~~~~p~~~~~~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~vGT~~Y~APE~l~~------~~~~~~~DiwSlG~il~E 572 (669)
T cd05610 499 PTQKPRPHGNLYQTPKQVKIGTPYRTPKSVRRGAAPVEGERILGTPDYLAPELLLG------KPHGPAVDWWALGVCLFE 572 (669)
T ss_pred CCCCCCCCCceeECCccccccccCCCchhhhcccccccCCceeeCccccCHHHcCC------CCCCcHHHHHHHHHHHHH
Confidence 34566666 56666666778899998877654322 234689999999999874 457899999999999999
Q ss_pred HHhCCCCCCCchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCC
Q psy3880 144 LLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH 223 (408)
Q Consensus 144 ll~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~ 223 (408)
|++|..||.+......+..++...+.+... .
T Consensus 573 lltG~~pf~~~~~~~~~~~il~~~~~~p~~------------------------------~------------------- 603 (669)
T cd05610 573 FLTGIPPFNDETPQQVFQNILNRDIPWPEG------------------------------E------------------- 603 (669)
T ss_pred HHHCCCCCCCCCHHHHHHHHHhcCCCCCcc------------------------------c-------------------
Confidence 999999999988888888876644321100 0
Q ss_pred chhHHHHHHHHhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q psy3880 224 RKQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPK 282 (408)
Q Consensus 224 ~~~~~~~~~i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~ 282 (408)
..++.++.+++.+||..||.+|||+.|+|+||||...
T Consensus 604 ----------------------~~~~~~~~~~l~~lL~~dP~~R~ta~e~l~h~~~~~~ 640 (669)
T cd05610 604 ----------------------EKLSVNAQNAIEILLTMDPTKRAGLKELKQHPLFHGV 640 (669)
T ss_pred ----------------------ccCCHHHHHHHHHHcccChhHCcCHHHHHhCHhhcCC
Confidence 0235678899999999999999999999999999753
No 441
>KOG1266|consensus
Probab=98.84 E-value=8.3e-10 Score=105.30 Aligned_cols=134 Identities=19% Similarity=0.281 Sum_probs=91.9
Q ss_pred ccccCCcEEEEeccCCcHH-------HHHHHHHhhchhhHHhhhCCH---------HHHHHHHHHHHHHHHHHHHCC--C
Q psy3880 6 MVAHSRVVVRVKEEGDDLK-------HLAAQVVDKGEAAVQDIINSN---------PALRYIMRQLFEALEHVHNHS--V 67 (408)
Q Consensus 6 ~~~~~~~i~~~~~~~~~~~-------~lv~e~~~~g~~~l~~~~~~~---------~~~r~i~~qil~aL~~LH~~~--I 67 (408)
.+.|.| +|.+...-+|.+ .++.||+..|. +...+.+- ...+.++.||+.||.|||+.. |
T Consensus 123 qlvHsn-lvkfH~yw~d~K~~e~~rviFiteymssgs--~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~Ppi 199 (458)
T KOG1266|consen 123 QLVHSN-LVKFHKYWTDKKYEEKPRVIFITEYMSSGS--LKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPPI 199 (458)
T ss_pred HHHHHH-HHHHHHhhcccccccccceEEEEecccchh--HHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCcc
Confidence 356777 445554333333 47889999987 66655432 566889999999999999875 9
Q ss_pred eeccCCCCcEEEecCCCEEEeccccchhcccC-----c-ccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHH
Q psy3880 68 VHRDLKPENILLDDQMNVKLTDFGFARVLKKG-----E-KLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIM 141 (408)
Q Consensus 68 vHRDLKp~NILl~~~~~iKl~DFGla~~~~~~-----~-~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil 141 (408)
+|.++....|.+..+|-||+.---.. ..... + ...-..+-++|-|||.=. ....+.++|||++|.+.
T Consensus 200 ihgnlTc~tifiq~ngLIkig~~ap~-s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~------~tn~~~a~dIy~fgmcA 272 (458)
T KOG1266|consen 200 IHGNLTCDTIFIQHNGLIKIGSVAPD-STHPSVNSTREAEKSVNTSLPGFSAPESGT------TTNTTGASDIYKFGMCA 272 (458)
T ss_pred ccCCcchhheeecCCceEEecccCcc-ccchhhhhhhHhhhhccccCCccccCCcCc------ccccccchhhhhhhHHH
Confidence 99999999999999888887532110 00000 0 001134568899998532 34456789999999999
Q ss_pred HHHHhCCC
Q psy3880 142 YTLLVGCP 149 (408)
Q Consensus 142 ~~ll~G~~ 149 (408)
.+|..+..
T Consensus 273 lemailEi 280 (458)
T KOG1266|consen 273 LEMAILEI 280 (458)
T ss_pred HHHHHhee
Confidence 88887643
No 442
>KOG0601|consensus
Probab=98.79 E-value=4e-09 Score=107.74 Aligned_cols=181 Identities=23% Similarity=0.341 Sum_probs=132.4
Q ss_pred cCCcHHHHHHHHHhhchhhHHhhhC------CHHHHHHHHHHHHH----HHHHHHHCCCeeccCCCCcEEEecC-CCEEE
Q psy3880 19 EGDDLKHLAAQVVDKGEAAVQDIIN------SNPALRYIMRQLFE----ALEHVHNHSVVHRDLKPENILLDDQ-MNVKL 87 (408)
Q Consensus 19 ~~~~~~~lv~e~~~~g~~~l~~~~~------~~~~~r~i~~qil~----aL~~LH~~~IvHRDLKp~NILl~~~-~~iKl 87 (408)
++.+..|+-+|+|. .. ++.+.. ....+...+.+... ||.++|+.+|+|-|+||+||....+ ..+++
T Consensus 188 e~~~~lfiqtE~~~-~s--l~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~~~~s~~~ 264 (524)
T KOG0601|consen 188 EGSGILFIQTELCG-ES--LQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTTSDWTSCKL 264 (524)
T ss_pred ccCCcceeeecccc-ch--hHHhhhcccccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheecccccceeec
Confidence 56778899999886 22 555533 33788888899988 9999999999999999999999988 88999
Q ss_pred eccccchhcccCccc------ccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCCCCCCchhHHHHH
Q psy3880 88 TDFGFARVLKKGEKL------MDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLR 161 (408)
Q Consensus 88 ~DFGla~~~~~~~~~------~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~~~~ 161 (408)
+|||+...+..+.-. ...-|..-|++||++.. -++...|++|+|.+..+..++..+....
T Consensus 265 ~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~-------l~~~~~di~sl~ev~l~~~l~~~~~~~g------- 330 (524)
T KOG0601|consen 265 TDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNG-------LATFASDIFSLGEVILEAILGSHLPSVG------- 330 (524)
T ss_pred CCcceeEEccCCccccceeeeecCCCCceEeChhhhcc-------ccchHhhhcchhhhhHhhHhhcccccCC-------
Confidence 999998877654311 12356678999999863 4788999999999999888876654221
Q ss_pred HHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCCCCC
Q psy3880 162 NIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFS 241 (408)
Q Consensus 162 ~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~~f~ 241 (408)
..+.|. ++... | .+
T Consensus 331 ---------------------------------------~~~~W~-------------~~r~~-------------~-ip 344 (524)
T KOG0601|consen 331 ---------------------------------------KNSSWS-------------QLRQG-------------Y-IP 344 (524)
T ss_pred ---------------------------------------CCCCcc-------------ccccc-------------c-Cc
Confidence 112221 00000 0 01
Q ss_pred CCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q psy3880 242 SPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPK 282 (408)
Q Consensus 242 ~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~~~ 282 (408)
.......|.+....+..|+.-||..|++++.+++|+++...
T Consensus 345 ~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~ 385 (524)
T KOG0601|consen 345 LEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSK 385 (524)
T ss_pred hhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccch
Confidence 11112345566669999999999999999999999999754
No 443
>KOG0599|consensus
Probab=98.72 E-value=6.7e-09 Score=96.86 Aligned_cols=51 Identities=80% Similarity=1.538 Sum_probs=48.7
Q ss_pred cchhhhhhhHHHHHHHhCCCCCCCchhHHHHHHHHhccccCCCCCCccCCC
Q psy3880 130 QAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISG 180 (408)
Q Consensus 130 ~~~DiwSlGvil~~ll~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 180 (408)
..+|+||+|||+|.|+.|++||++..+..+++.|++|+|.|.+|+|.+++.
T Consensus 207 ~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGkyqF~speWadis~ 257 (411)
T KOG0599|consen 207 KEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKYQFRSPEWADISA 257 (411)
T ss_pred chhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhcccccCCcchhhccc
Confidence 368999999999999999999999999999999999999999999998876
No 444
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=98.64 E-value=8.9e-09 Score=87.66 Aligned_cols=71 Identities=28% Similarity=0.427 Sum_probs=59.6
Q ss_pred CcHHHHHHHHHhhchhhHHhhhCCHHHHHHHHHHHHHHHHHHHHC---CCeeccCCCCcEEEecCCCEEEeccccchh
Q psy3880 21 DDLKHLAAQVVDKGEAAVQDIINSNPALRYIMRQLFEALEHVHNH---SVVHRDLKPENILLDDQMNVKLTDFGFARV 95 (408)
Q Consensus 21 ~~~~~lv~e~~~~g~~~l~~~~~~~~~~r~i~~qil~aL~~LH~~---~IvHRDLKp~NILl~~~~~iKl~DFGla~~ 95 (408)
.+..++++||+.|+. +... +......++.+++.+|.++|.. +++|+|++|+||+++..+.++++|||.+..
T Consensus 65 ~~~~~~v~e~~~g~~--~~~~--~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 65 DGWSYLLMEWIEGET--LDEV--SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred CCccEEEEEecCCee--cccC--CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 357899999999887 4432 4455677889999999999985 799999999999999988999999998764
No 445
>KOG2137|consensus
Probab=98.60 E-value=1.3e-07 Score=98.26 Aligned_cols=151 Identities=24% Similarity=0.361 Sum_probs=96.1
Q ss_pred HHHHHHHHHH-HCCCeeccCCCCcEEEecCCCEEEeccccchhcccCccc----c----c--CCCCCcccChhhhhhccc
Q psy3880 54 QLFEALEHVH-NHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKL----M----D--LCGTPGYLAPEVLRANMF 122 (408)
Q Consensus 54 qil~aL~~LH-~~~IvHRDLKp~NILl~~~~~iKl~DFGla~~~~~~~~~----~----~--~~gt~~y~aPE~l~~~~~ 122 (408)
++..|+.|+| +.++||++|.|++|.++.++..||+.|+++......... . . ..-...|.|||++..
T Consensus 107 ~v~dgl~flh~sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~--- 183 (700)
T KOG2137|consen 107 NVADGLAFLHRSAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLG--- 183 (700)
T ss_pred cccchhhhhccCcceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcc---
Confidence 4558899999 568999999999999999999999999987654432210 0 0 112335677776643
Q ss_pred cCcCCCCcchhhhhhhHHHHHHH-hCCCCCCCchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCc
Q psy3880 123 EDATGYGQAVDVWACGVIMYTLL-VGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQA 201 (408)
Q Consensus 123 ~~~~~~~~~~DiwSlGvil~~ll-~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~ 201 (408)
...+.++|++|+||.+|.+. .|+..+..
T Consensus 184 ---~~~~~~sd~fSlG~li~~i~~~gk~i~~a------------------------------------------------ 212 (700)
T KOG2137|consen 184 ---TTNTPASDVFSLGVLIYTIYNGGKSIIAA------------------------------------------------ 212 (700)
T ss_pred ---ccccccccceeeeeEEEEEecCCcchhhc------------------------------------------------
Confidence 12244555566665555554 23332211
Q ss_pred ccccchhhhHHHhhcCCCCCCCchhHHHHH--HHHhcCCCCCCCcCCCCCccHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q psy3880 202 VDVWACGVIMYTLLVGCPPFWHRKQMVMLR--NIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFF 279 (408)
Q Consensus 202 ~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~--~i~~~~~~f~~~~~~~iS~~~~dLI~klL~~dP~~R~ta~e~L~Hpwf 279 (408)
.+...... .-..+...+... ..++.+.++=|.++|..|+.-||++.+++.-|||
T Consensus 213 ----------------------~~~~~~~~~~~~~~~~~~~~~s--~~~p~el~~~l~k~l~~~~~~rp~~~~l~~~~ff 268 (700)
T KOG2137|consen 213 ----------------------NGGLLSYSFSRNLLNAGAFGYS--NNLPSELRESLKKLLNGDSAVRPTLDLLLSIPFF 268 (700)
T ss_pred ----------------------cCCcchhhhhhccccccccccc--ccCcHHHHHHHHHHhcCCcccCcchhhhhccccc
Confidence 11000000 000000111111 4688999999999999999999999999999999
Q ss_pred CCC
Q psy3880 280 HPK 282 (408)
Q Consensus 280 ~~~ 282 (408)
++.
T Consensus 269 ~D~ 271 (700)
T KOG2137|consen 269 SDP 271 (700)
T ss_pred CCc
Confidence 865
No 446
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=98.59 E-value=1.8e-08 Score=103.03 Aligned_cols=80 Identities=23% Similarity=0.276 Sum_probs=60.6
Q ss_pred EeccCCcHHHHHHHHHhhchhhHHhhhCCH---HHHHHHHHHHHH-HHHHHHHCCCeeccCCCCcEEEecCCCEEEeccc
Q psy3880 16 VKEEGDDLKHLAAQVVDKGEAAVQDIINSN---PALRYIMRQLFE-ALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFG 91 (408)
Q Consensus 16 ~~~~~~~~~~lv~e~~~~g~~~l~~~~~~~---~~~r~i~~qil~-aL~~LH~~~IvHRDLKp~NILl~~~~~iKl~DFG 91 (408)
++.+..+..+|||||+.|+. |.+..... .....++.+++. .+..+|..|++|+|++|.||+++.++.++++|||
T Consensus 225 v~~~~~~~~vLvmE~i~G~~--L~~~~~~~~~~~~~~~ia~~~~~~~l~ql~~~g~~H~D~hPgNilv~~~g~i~liDfG 302 (437)
T TIGR01982 225 VYWDRTSERVLTMEWIDGIP--LSDIAALDEAGLDRKALAENLARSFLNQVLRDGFFHADLHPGNIFVLKDGKIIALDFG 302 (437)
T ss_pred EehhhcCCceEEEEeECCcc--cccHHHHHhcCCCHHHHHHHHHHHHHHHHHhCCceeCCCCcccEEECCCCcEEEEeCC
Confidence 44455566799999999987 65543211 122345555555 4788999999999999999999999999999999
Q ss_pred cchhcc
Q psy3880 92 FARVLK 97 (408)
Q Consensus 92 la~~~~ 97 (408)
++..+.
T Consensus 303 ~~~~l~ 308 (437)
T TIGR01982 303 IVGRLS 308 (437)
T ss_pred CeeECC
Confidence 987654
No 447
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=98.58 E-value=2.4e-08 Score=90.95 Aligned_cols=72 Identities=15% Similarity=0.239 Sum_probs=56.5
Q ss_pred HHHHHHHHHhhch---hhHHhhhCCHHHHHHHHHHHHHHHHHH-HHCCCeeccCCCCcEEEecCCCEEEeccccchh
Q psy3880 23 LKHLAAQVVDKGE---AAVQDIINSNPALRYIMRQLFEALEHV-HNHSVVHRDLKPENILLDDQMNVKLTDFGFARV 95 (408)
Q Consensus 23 ~~~lv~e~~~~g~---~~l~~~~~~~~~~r~i~~qil~aL~~L-H~~~IvHRDLKp~NILl~~~~~iKl~DFGla~~ 95 (408)
..+|||||+.+++ ..|.+...+.+++..++.|++.+|..| |+.||||+||++.|||+. ++.+.|+|||.|..
T Consensus 98 ~~~lvME~Ig~~~~~~~~Lkd~~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs~~NIL~~-~~~v~iIDF~qav~ 173 (197)
T cd05146 98 KHVLVMSFIGDDQVPAPKLKDAKLNDEEMKNAYYQVLSMMKQLYKECNLVHADLSEYNMLWH-DGKVWFIDVSQSVE 173 (197)
T ss_pred CCEEEEEEcCCCCccchhhhccccCHHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEE-CCcEEEEECCCcee
Confidence 3467888887652 124444445566778889999999999 899999999999999997 46799999997754
No 448
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=98.55 E-value=1.3e-08 Score=89.71 Aligned_cols=75 Identities=20% Similarity=0.305 Sum_probs=56.5
Q ss_pred EEeccCCcHHHHHHHHHhhchhhHHhhhCCHHHHHHHHHHHHHHHHHHHHCCC-----eeccCCCCcEEEecCCCEEEec
Q psy3880 15 RVKEEGDDLKHLAAQVVDKGEAAVQDIINSNPALRYIMRQLFEALEHVHNHSV-----VHRDLKPENILLDDQMNVKLTD 89 (408)
Q Consensus 15 ~~~~~~~~~~~lv~e~~~~g~~~l~~~~~~~~~~r~i~~qil~aL~~LH~~~I-----vHRDLKp~NILl~~~~~iKl~D 89 (408)
++...+.+..++|||+++|.. +.+. ......++.+++.+|..||+.++ +|+|++|.||+++ ++.++++|
T Consensus 57 ~~~~~~~~~~~lv~e~i~G~~--l~~~---~~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liD 130 (170)
T cd05151 57 KLYYFDPETGVLITEFIEGSE--LLTE---DFSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLID 130 (170)
T ss_pred ceEEEeCCCCeEEEEecCCCc--cccc---cccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEe
Confidence 333333334579999999986 4432 11224567899999999999986 9999999999999 66899999
Q ss_pred cccchh
Q psy3880 90 FGFARV 95 (408)
Q Consensus 90 FGla~~ 95 (408)
||.+..
T Consensus 131 f~~a~~ 136 (170)
T cd05151 131 WEYAGM 136 (170)
T ss_pred cccccC
Confidence 998753
No 449
>KOG0591|consensus
Probab=98.46 E-value=1.3e-07 Score=88.68 Aligned_cols=88 Identities=25% Similarity=0.499 Sum_probs=78.1
Q ss_pred CCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCCCCCCCcC-CCCCccH
Q psy3880 174 EWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEW-NDISEDP 252 (408)
Q Consensus 174 ~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~~f~~~~~-~~iS~~~ 252 (408)
.+.+++.||+||.+... +|+.++|+||+||++|+|..-.+||.+++-.++.++|.++.++. -| ...|.++
T Consensus 187 S~VGTPyYMSPE~i~~~------~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qgd~~~---~p~~~YS~~l 257 (375)
T KOG0591|consen 187 SLVGTPYYMSPERIHES------GYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQGDYPP---LPDEHYSTDL 257 (375)
T ss_pred hhcCCCcccCHHHHhcC------CCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcCCCCC---CcHHHhhhHH
Confidence 35677889999999875 68899999999999999999999999999999999999997752 23 4579999
Q ss_pred HHHHHHhcccCCCCCCCH
Q psy3880 253 KDLIRKLLIVTPEDRYSV 270 (408)
Q Consensus 253 ~dLI~klL~~dP~~R~ta 270 (408)
..||..|+.+||+.||+.
T Consensus 258 ~~li~~ci~vd~~~RP~t 275 (375)
T KOG0591|consen 258 RELINMCIAVDPEQRPDT 275 (375)
T ss_pred HHHHHHHccCCcccCCCc
Confidence 999999999999999984
No 450
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.45 E-value=2.7e-06 Score=84.30 Aligned_cols=108 Identities=22% Similarity=0.313 Sum_probs=85.5
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEecCCCEEEeccccchhcccCcccccCCCCCcccChhhhhhccccCc
Q psy3880 46 PALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDA 125 (408)
Q Consensus 46 ~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl~~~~~iKl~DFGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~ 125 (408)
+-+..+.+.++.+..-||..|.+-.|+.++|+|+++++.+.|.|-..-..-.++......+|.+.|++||.-.-..+..
T Consensus 117 ~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVsd~~~V~LVdsDsfqi~~ng~~~~cpVg~~eftPPElQ~~~sf~g- 195 (637)
T COG4248 117 DFLLRVARNLASAFATLHEHGHVVGDVNQNSFLVSDDSKVVLVDSDSFQINANGTLHLCPVGVSEFTPPELQTLPSFVG- 195 (637)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCcccccCccceeeecCceEEEEcccceeeccCCceEecccCccccCCHHHhccccccc-
Confidence 4567788999999999999999999999999999999999999854322223444455678999999999865443332
Q ss_pred CCCCcchhhhhhhHHHHHHHhC-CCCCCCc
Q psy3880 126 TGYGQAVDVWACGVIMYTLLVG-CPPFWHR 154 (408)
Q Consensus 126 ~~~~~~~DiwSlGvil~~ll~G-~~pf~~~ 154 (408)
..-+...|.+.||+++++++.| ..||.+-
T Consensus 196 ~~r~~~hD~FGLavLiF~lL~ggrHPysGI 225 (637)
T COG4248 196 FERTANHDNFGLAVLIFHLLFGGRHPYSGI 225 (637)
T ss_pred cCCCccccchhHHHHHHHHHhcCCCCCCcc
Confidence 2335678999999999999976 8999764
No 451
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=98.41 E-value=2.7e-07 Score=81.72 Aligned_cols=98 Identities=19% Similarity=0.325 Sum_probs=72.4
Q ss_pred cCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchh-HHHHHHHHhcCCCCCC---CcCCCCCc--
Q psy3880 177 DISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQ-MVMLRNIMEGKYSFSS---PEWNDISE-- 250 (408)
Q Consensus 177 ~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~-~~~~~~i~~~~~~f~~---~~~~~iS~-- 250 (408)
....|++||++... .|+.++||||+||++|+|++|.+||..... ...+..+......... +....+++
T Consensus 66 g~~~y~aPE~~~~~------~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (176)
T smart00750 66 VDPYFMAPEVIQGQ------SYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSAAR 139 (176)
T ss_pred CcccccChHHhcCC------CCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHhhh
Confidence 34679999999754 467899999999999999999999976543 2333333332222110 11223444
Q ss_pred cHHHHHHHhcccCCCCCCCHHHHHcCCCCC
Q psy3880 251 DPKDLIRKLLIVTPEDRYSVKEALNHSFFH 280 (408)
Q Consensus 251 ~~~dLI~klL~~dP~~R~ta~e~L~Hpwf~ 280 (408)
++++||.+||..||.+|||+.|+++|+|+.
T Consensus 140 ~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~ 169 (176)
T smart00750 140 SFADFMRVCASRLPQRREAANHYLAHCRAL 169 (176)
T ss_pred hHHHHHHHHHhcccccccCHHHHHHHHHHH
Confidence 699999999999999999999999999974
No 452
>KOG0033|consensus
Probab=98.38 E-value=3.8e-07 Score=84.17 Aligned_cols=49 Identities=51% Similarity=1.217 Sum_probs=46.7
Q ss_pred chhhhhhhHHHHHHHhCCCCCCCchhHHHHHHHHhccccCCCCCCccCC
Q psy3880 131 AVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDIS 179 (408)
Q Consensus 131 ~~DiwSlGvil~~ll~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 179 (408)
.+||||+|||+|.|+.|++||++.++..+..+|..|.|.+.+|+|..++
T Consensus 192 pvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~~~~w~~is 240 (355)
T KOG0033|consen 192 PVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYPSPEWDTVT 240 (355)
T ss_pred cchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCCCcccCcCC
Confidence 6899999999999999999999999999999999999999999998764
No 453
>KOG0601|consensus
Probab=98.35 E-value=2.2e-07 Score=95.24 Aligned_cols=121 Identities=21% Similarity=0.303 Sum_probs=87.6
Q ss_pred cHHHHHHHHHhhchhhHHhhh---CCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEecC-CCEEEeccccchhcc
Q psy3880 22 DLKHLAAQVVDKGEAAVQDII---NSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQ-MNVKLTDFGFARVLK 97 (408)
Q Consensus 22 ~~~~lv~e~~~~g~~~l~~~~---~~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl~~~-~~iKl~DFGla~~~~ 97 (408)
+..|+-.|||.++..+|...+ ..+...+.+..|++.++.++|++.++|+|+||+||++..+ +..++.|||++..+.
T Consensus 339 r~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t~~~ 418 (524)
T KOG0601|consen 339 RQGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISNDGFFSKLGDFGCWTRLA 418 (524)
T ss_pred ccccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccchhhhcccccccceeeccchhhhhccccccccccc
Confidence 345799999999985555533 2346778889999999999999999999999999999876 788999999886532
Q ss_pred cCcccccCCCCCccc-ChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhCCC
Q psy3880 98 KGEKLMDLCGTPGYL-APEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCP 149 (408)
Q Consensus 98 ~~~~~~~~~gt~~y~-aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G~~ 149 (408)
... ......-++. ..|++.. ...+..++|++|+|..+.+.+++..
T Consensus 419 ~~~--~~~~~~~r~~p~~~~~~e-----~~~~~~~~~~~sl~~~~~e~~~~~~ 464 (524)
T KOG0601|consen 419 FSS--GVFHHIDRLYPIAEILLE-----DYPHLSKADIFSLGLSVDEAITGSP 464 (524)
T ss_pred eec--ccccccccccccchhhcc-----ccccccccccccccccccccccCcc
Confidence 211 1112222334 3555543 2456778888998888877777654
No 454
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.31 E-value=2.3e-07 Score=82.69 Aligned_cols=75 Identities=20% Similarity=0.372 Sum_probs=60.8
Q ss_pred EeccCCcHHHHHHHHHhhchhhHHhhhCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEecCCCEEEeccccchh
Q psy3880 16 VKEEGDDLKHLAAQVVDKGEAAVQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARV 95 (408)
Q Consensus 16 ~~~~~~~~~~lv~e~~~~g~~~l~~~~~~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl~~~~~iKl~DFGla~~ 95 (408)
+++.+.+...|+|||+.|-. |.|.+.+. .-.+++.+-.-+.-||..||||.||.++||++.... +.++|||++..
T Consensus 66 v~dvD~~~~~I~me~I~G~~--lkd~l~~~--~~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 66 VYDVDPDNGLIVMEYIEGEL--LKDALEEA--RPDLLREVGRLVGKLHKAGIVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred EEEEcCCCCEEEEEEeCChh--HHHHHHhc--chHHHHHHHHHHHHHHhcCeecCCCccceEEEeCCc-EEEEECCcccc
Confidence 45556667789999998877 77777655 245667777778899999999999999999998655 89999999875
No 455
>KOG0660|consensus
Probab=98.26 E-value=6.9e-07 Score=86.39 Aligned_cols=82 Identities=29% Similarity=0.444 Sum_probs=58.6
Q ss_pred CCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCCCCCCCcCCC-CCccH
Q psy3880 174 EWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWND-ISEDP 252 (408)
Q Consensus 174 ~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~~f~~~~~~~-iS~~~ 252 (408)
++..+..|.|||++..- ..|++++||||+|||+.+||+|+|-|-+.+....+..|+.--...+...... -|+.+
T Consensus 186 eYVaTRWYRAPElll~~-----~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~a 260 (359)
T KOG0660|consen 186 EYVATRWYRAPELLLNS-----SEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKA 260 (359)
T ss_pred cceeeeeecCHHHHhcc-----ccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHH
Confidence 34456669999998543 4699999999999999999999999999998888888776543332221222 23456
Q ss_pred HHHHHHhc
Q psy3880 253 KDLIRKLL 260 (408)
Q Consensus 253 ~dLI~klL 260 (408)
+..|+.+=
T Consensus 261 r~yi~slp 268 (359)
T KOG0660|consen 261 RPYIKSLP 268 (359)
T ss_pred HHHHHhCC
Confidence 66666543
No 456
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=98.21 E-value=4e-07 Score=94.92 Aligned_cols=75 Identities=19% Similarity=0.254 Sum_probs=55.6
Q ss_pred EEeccCCcHHHHHHHHHhhchhhHHhh--hCC---------HHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEecCC
Q psy3880 15 RVKEEGDDLKHLAAQVVDKGEAAVQDI--INS---------NPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQM 83 (408)
Q Consensus 15 ~~~~~~~~~~~lv~e~~~~g~~~l~~~--~~~---------~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl~~~~ 83 (408)
.++.+..+..+|||||+.|+. +.+. +.. +..+..++.|+ ...|++|+|+||.||+++.++
T Consensus 227 ~v~~d~st~~VLvmE~i~G~~--l~d~~~l~~~g~d~~~la~~~v~~~~~Qi-------f~~GffHaDpHPGNIlv~~~g 297 (537)
T PRK04750 227 EVYWDYCSETVMVMERMYGIP--VSDVAALRAAGTDMKLLAERGVEVFFTQV-------FRDGFFHADMHPGNIFVSYDP 297 (537)
T ss_pred eeecccCCCceEEEeeecCcc--HHhHHHHHhcCCCHHHHHHHHHHHHHHHH-------HhCCeeeCCCChHHeEEecCC
Confidence 355566677899999999998 5542 211 12344445554 469999999999999999887
Q ss_pred ----CEEEeccccchhccc
Q psy3880 84 ----NVKLTDFGFARVLKK 98 (408)
Q Consensus 84 ----~iKl~DFGla~~~~~ 98 (408)
.++++|||++..+..
T Consensus 298 ~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 298 PENPRYIALDFGIVGSLNK 316 (537)
T ss_pred CCCCeEEEEecceEEECCH
Confidence 899999999876654
No 457
>KOG0600|consensus
Probab=98.20 E-value=1.1e-06 Score=88.19 Aligned_cols=64 Identities=33% Similarity=0.526 Sum_probs=53.8
Q ss_pred CCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCCCCCCCcCC
Q psy3880 178 ISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWN 246 (408)
Q Consensus 178 ~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~~f~~~~~~ 246 (408)
+..|.+||.|.+. +.||.++|+||+||||.+|+.|+|.|.+++..+.++.|-+---......|.
T Consensus 282 TLWYRpPELLLG~-----t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~ 345 (560)
T KOG0600|consen 282 TLWYRPPELLLGA-----TSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWP 345 (560)
T ss_pred EeeccChHHhcCC-----cccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccc
Confidence 4559999999874 679999999999999999999999999999999888886644444455676
No 458
>KOG0607|consensus
Probab=98.14 E-value=1.5e-06 Score=83.08 Aligned_cols=25 Identities=40% Similarity=0.803 Sum_probs=20.8
Q ss_pred hHHHHHHHHhccccCCCCCCccCCC
Q psy3880 156 QMVMLRNIMEGKYSFSSPEWNDISG 180 (408)
Q Consensus 156 ~~~~~~~i~~~~~~~~~~~~~~~~~ 180 (408)
+..++..|.+|+|.|...+|..++.
T Consensus 311 Q~~LFesIQEGkYeFPdkdWahIS~ 335 (463)
T KOG0607|consen 311 QNKLFESIQEGKYEFPDKDWAHISS 335 (463)
T ss_pred HHHHHHHHhccCCcCChhhhHHhhH
Confidence 5677888999999999999987753
No 459
>KOG0667|consensus
Probab=98.13 E-value=1.6e-06 Score=89.48 Aligned_cols=50 Identities=36% Similarity=0.586 Sum_probs=45.3
Q ss_pred CCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhc
Q psy3880 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEG 236 (408)
Q Consensus 181 ~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~ 236 (408)
|.|||++.+- +|+.++||||+|||+++|.+|.|-|-+.+..+.+..|++-
T Consensus 354 YRAPEVILGl------pY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~ 403 (586)
T KOG0667|consen 354 YRAPEVILGL------PYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEV 403 (586)
T ss_pred cccchhhccC------CCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHH
Confidence 8999999874 6888999999999999999999999999998888888764
No 460
>KOG0616|consensus
Probab=98.11 E-value=2.7e-06 Score=80.47 Aligned_cols=42 Identities=43% Similarity=0.942 Sum_probs=39.6
Q ss_pred cchhhhhhhHHHHHHHhCCCCCCCchhHHHHHHHHhccccCC
Q psy3880 130 QAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFS 171 (408)
Q Consensus 130 ~~~DiwSlGvil~~ll~G~~pf~~~~~~~~~~~i~~~~~~~~ 171 (408)
+++|+|||||++|||+.|.+||.+.+...+..+|++|++.|.
T Consensus 220 kavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~v~fP 261 (355)
T KOG0616|consen 220 KAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGKVKFP 261 (355)
T ss_pred cchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCcccCC
Confidence 479999999999999999999999999999999999998765
No 461
>KOG0663|consensus
Probab=98.09 E-value=3e-06 Score=81.42 Aligned_cols=68 Identities=31% Similarity=0.415 Sum_probs=55.5
Q ss_pred cCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCCCCCCCcCCCCC
Q psy3880 177 DISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDIS 249 (408)
Q Consensus 177 ~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~~f~~~~~~~iS 249 (408)
.+..|.+||.|.+. ..|+.++||||+|||+.+++.+.|-|.+.+..+.+..|..---......|+.++
T Consensus 239 VTLWYRaPELLLG~-----~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~ 306 (419)
T KOG0663|consen 239 VTLWYRAPELLLGA-----KTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYS 306 (419)
T ss_pred EEeeecCHHHhcCC-----cccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCcc
Confidence 35569999999864 569999999999999999999999999999888888877654444455677665
No 462
>KOG0659|consensus
Probab=98.07 E-value=4.1e-06 Score=78.25 Aligned_cols=68 Identities=29% Similarity=0.508 Sum_probs=57.1
Q ss_pred cCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCCCCCCCcCCCCC
Q psy3880 177 DISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDIS 249 (408)
Q Consensus 177 ~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~~f~~~~~~~iS 249 (408)
-+..|.|||.+.+. ..||..+||||.|||+.+|+-|.|=|-+.+..+.+..|...--......|++++
T Consensus 163 ~TRWYRAPELLfGs-----r~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~ 230 (318)
T KOG0659|consen 163 VTRWYRAPELLFGS-----RQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMT 230 (318)
T ss_pred eeeeccChHHhccc-----hhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCcccc
Confidence 34569999998764 569999999999999999999999999999988888887766666667788765
No 463
>PTZ00284 protein kinase; Provisional
Probab=98.06 E-value=2.9e-06 Score=87.56 Aligned_cols=55 Identities=24% Similarity=0.419 Sum_probs=44.8
Q ss_pred ccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhc
Q psy3880 176 NDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEG 236 (408)
Q Consensus 176 ~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~ 236 (408)
..+..|++||++... .|+.++||||+||++|+|++|.+||.+.+..+.+..+...
T Consensus 306 ~gt~~Y~APE~~~~~------~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~ 360 (467)
T PTZ00284 306 VSTRHYRSPEVVLGL------GWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKT 360 (467)
T ss_pred cCCccccCcHHhhcC------CCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH
Confidence 345679999998653 4788999999999999999999999887776666655544
No 464
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.06 E-value=1.7e-06 Score=79.63 Aligned_cols=70 Identities=24% Similarity=0.440 Sum_probs=56.9
Q ss_pred HHHHHHHhhchhhHHhhhCC-----HHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEecCC---CEEEeccccchh
Q psy3880 25 HLAAQVVDKGEAAVQDIINS-----NPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQM---NVKLTDFGFARV 95 (408)
Q Consensus 25 ~lv~e~~~~g~~~l~~~~~~-----~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl~~~~---~iKl~DFGla~~ 95 (408)
+||+|.++|-. .|.+.+.. ....+.++.++...+.-||++||+|+|+++.|||++.+. .+.++||+.++.
T Consensus 93 ~lite~l~~~~-~L~~~~~~~~~~~~~~~~~ll~~l~~~i~~lH~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~ 170 (206)
T PF06293_consen 93 YLITEALPGAQ-DLRDLLQQWEQLDPSQRRELLRALARLIAKLHDAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF 170 (206)
T ss_pred EEEEEeCCCcc-cHHHHHHhhcccchhhHHHHHHHHHHHHHHHHHCcCCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence 57777777642 25555543 567789999999999999999999999999999999876 799999987654
No 465
>KOG0604|consensus
Probab=98.00 E-value=2.3e-06 Score=81.11 Aligned_cols=101 Identities=33% Similarity=0.547 Sum_probs=71.2
Q ss_pred HCCCeeccCCCCcEE-EecCCCEEEec--cccchhcccCcccccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHH
Q psy3880 64 NHSVVHRDLKPENIL-LDDQMNVKLTD--FGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVI 140 (408)
Q Consensus 64 ~~~IvHRDLKp~NIL-l~~~~~iKl~D--FGla~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvi 140 (408)
=.++...+-.+.-+| +.+-|-.|..+ -++- ......+...|.-+-||-.. +.+|+||+||+
T Consensus 189 pENLLyt~t~~na~lKLtDfGFAK~t~~~~~L~-----TPc~TPyYvaPevlg~eKyd-----------kscdmwSlgVi 252 (400)
T KOG0604|consen 189 PENLLYTTTSPNAPLKLTDFGFAKETQEPGDLM-----TPCFTPYYVAPEVLGPEKYD-----------KSCDMWSLGVI 252 (400)
T ss_pred hhheeeecCCCCcceEecccccccccCCCcccc-----CCcccccccCHHHhCchhcC-----------CCCCccchhHH
Confidence 356676666655444 34556677665 2221 11233344455666777644 47899999999
Q ss_pred HHHHHhCCCCCCCchh----HHHHHHHHhccccCCCCCCccCCC
Q psy3880 141 MYTLLVGCPPFWHRKQ----MVMLRNIMEGKYSFSSPEWNDISG 180 (408)
Q Consensus 141 l~~ll~G~~pf~~~~~----~~~~~~i~~~~~~~~~~~~~~~~~ 180 (408)
+|.|++|.+||++... ..+-.+|..|.|.|..|+|..+++
T Consensus 253 mYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP~pEWs~VSe 296 (400)
T KOG0604|consen 253 MYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFPEPEWSCVSE 296 (400)
T ss_pred HHHhhcCCCcccccCCccCChhHHhHhhccCccCCChhHhHHHH
Confidence 9999999999998763 568889999999999999987753
No 466
>KOG1243|consensus
Probab=98.00 E-value=5.9e-06 Score=85.97 Aligned_cols=132 Identities=15% Similarity=0.265 Sum_probs=91.7
Q ss_pred ccccCCcEEEEec-cCCcHHHHHHHHHhhchhhHHhhhCCHHHHHHHHHHHHHHHHHHH-HCCCeeccCCCCcEEEecCC
Q psy3880 6 MVAHSRVVVRVKE-EGDDLKHLAAQVVDKGEAAVQDIINSNPALRYIMRQLFEALEHVH-NHSVVHRDLKPENILLDDQM 83 (408)
Q Consensus 6 ~~~~~~~i~~~~~-~~~~~~~lv~e~~~~g~~~l~~~~~~~~~~r~i~~qil~aL~~LH-~~~IvHRDLKp~NILl~~~~ 83 (408)
+|-||+++..+.- +.++..|||+|-+.-=+..| +.+ ....+..-++||+.||.||| +.+++|.+|--..+.++..|
T Consensus 65 tlRHP~Il~yL~t~e~~~~~ylvTErV~Pl~~~l-k~l-~~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~G 142 (690)
T KOG1243|consen 65 TLRHPNILSYLDTTEEEGTLYLVTERVRPLETVL-KEL-GKEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVNESG 142 (690)
T ss_pred hccCchhhhhhhhhcccCceEEEeeccccHHHHH-HHh-HHHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEcCCC
Confidence 5789987744443 44567899988775422112 111 24678888999999999997 78899999999999999999
Q ss_pred CEEEeccccchhcccCcc-cccCCCCCcccChhhhhhccccCcCCCCcchhhhhhhHHHHHHHhC
Q psy3880 84 NVKLTDFGFARVLKKGEK-LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVG 147 (408)
Q Consensus 84 ~iKl~DFGla~~~~~~~~-~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~DiwSlGvil~~ll~G 147 (408)
..||.+|-++........ .....---.|..|+.+..+ .-..|.|-|||++++++.|
T Consensus 143 eWkLggle~v~~~~~~~~~~~~~~~~~s~~~P~~~~~s--------~~s~D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 143 EWKLGGLELVSKASGFNAPAKSLYLIESFDDPEEIDPS--------EWSIDSWGLGCLIEELFNG 199 (690)
T ss_pred cEEEeeeEEEeccccCCcccccchhhhcccChhhcCcc--------ccchhhhhHHHHHHHHhCc
Confidence 999999977643322111 1111112246667654321 2357999999999999999
No 467
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=97.98 E-value=7.1e-06 Score=78.48 Aligned_cols=54 Identities=30% Similarity=0.473 Sum_probs=44.5
Q ss_pred cCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhc
Q psy3880 177 DISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEG 236 (408)
Q Consensus 177 ~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~ 236 (408)
....|++||.+... .|+.++|+||+||++|+|++|.+||.+.+..+.+..|...
T Consensus 171 ~~~~y~aPE~~~~~------~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~ 224 (290)
T cd07862 171 VTLWYRAPEVLLQS------SYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDV 224 (290)
T ss_pred ccccccChHHHhCC------CCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHH
Confidence 45569999998643 4677999999999999999999999988877777666654
No 468
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=97.97 E-value=9.1e-06 Score=79.87 Aligned_cols=58 Identities=33% Similarity=0.645 Sum_probs=44.0
Q ss_pred ccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHH
Q psy3880 176 NDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIM 234 (408)
Q Consensus 176 ~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~ 234 (408)
.+...|++||++.... .....|+.++|+||+||++|+|++|.+||...+..+.+..+.
T Consensus 164 ~gt~~y~aPE~~~~~~-~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~ 221 (332)
T cd05623 164 VGTPDYISPEILQAME-DGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIM 221 (332)
T ss_pred ccCccccCHHHHhccc-cCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHh
Confidence 3566799999986421 112357889999999999999999999998777666555543
No 469
>KOG0593|consensus
Probab=97.95 E-value=5.8e-06 Score=78.56 Aligned_cols=56 Identities=36% Similarity=0.547 Sum_probs=47.4
Q ss_pred ccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhc
Q psy3880 176 NDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEG 236 (408)
Q Consensus 176 ~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~ 236 (408)
..+..|.|||.+.+. ++||.++||||+||++.+|++|.|-|-+++..+.+..|...
T Consensus 162 VATRWYRaPELLvGD-----tqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~kt 217 (396)
T KOG0593|consen 162 VATRWYRAPELLVGD-----TQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKT 217 (396)
T ss_pred hhhhhccChhhhccc-----CcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHH
Confidence 345679999999874 57999999999999999999999999999888777666553
No 470
>PHA02988 hypothetical protein; Provisional
Probab=97.95 E-value=1.1e-05 Score=77.56 Aligned_cols=49 Identities=18% Similarity=0.410 Sum_probs=38.7
Q ss_pred cCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHH
Q psy3880 177 DISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVM 229 (408)
Q Consensus 177 ~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~ 229 (408)
+...|++||++.... ..|+.++|+||+||++|+|++|..||.+.+..++
T Consensus 182 ~~~~y~aPE~~~~~~----~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~ 230 (283)
T PHA02988 182 NFMVYFSYKMLNDIF----SEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEI 230 (283)
T ss_pred CcccccCHHHhhhcc----ccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHH
Confidence 345699999986521 3578899999999999999999999976554433
No 471
>PTZ00036 glycogen synthase kinase; Provisional
Probab=97.94 E-value=4.3e-06 Score=85.82 Aligned_cols=55 Identities=27% Similarity=0.500 Sum_probs=43.9
Q ss_pred ccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHh
Q psy3880 176 NDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIME 235 (408)
Q Consensus 176 ~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~ 235 (408)
.....|+|||++... ..|+.++|+||+||++|+|++|.+||.+.+..+.+..+..
T Consensus 231 ~~t~~y~aPE~~~~~-----~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~ 285 (440)
T PTZ00036 231 ICSRFYRAPELMLGA-----TNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQ 285 (440)
T ss_pred CCCcCccCHHHhcCC-----CCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Confidence 345669999997542 3578899999999999999999999998877666655543
No 472
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=97.93 E-value=3.2e-05 Score=74.09 Aligned_cols=70 Identities=14% Similarity=0.252 Sum_probs=55.7
Q ss_pred HHHHHHHHhhchhhHHhhhC-------CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEec-------CCCEEEec
Q psy3880 24 KHLAAQVVDKGEAAVQDIIN-------SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDD-------QMNVKLTD 89 (408)
Q Consensus 24 ~~lv~e~~~~g~~~l~~~~~-------~~~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl~~-------~~~iKl~D 89 (408)
.+||+|++.+- .+|.+.+. +....+.++.++...+.-||+.||+|+|+++.|||++. +..+.++|
T Consensus 110 s~LVte~l~~~-~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LID 188 (268)
T PRK15123 110 SFIITEDLAPT-ISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSVID 188 (268)
T ss_pred eEEEEeeCCCC-ccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEeccccCCCCCceEEEEE
Confidence 46888888764 12544442 22467789999999999999999999999999999975 45789999
Q ss_pred cccch
Q psy3880 90 FGFAR 94 (408)
Q Consensus 90 FGla~ 94 (408)
|+.++
T Consensus 189 l~r~~ 193 (268)
T PRK15123 189 LHRAQ 193 (268)
T ss_pred CCccc
Confidence 99775
No 473
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=97.91 E-value=6.8e-06 Score=78.90 Aligned_cols=64 Identities=27% Similarity=0.447 Sum_probs=46.9
Q ss_pred CCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCCCCCCCcCC
Q psy3880 178 ISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWN 246 (408)
Q Consensus 178 ~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~~f~~~~~~ 246 (408)
...|++||.+... ..|+.++|+||+||++|+|++|.+||.+.+..+.+..+...........|+
T Consensus 166 ~~~y~aPE~~~~~-----~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (288)
T cd07871 166 TLWYRPPDVLLGS-----TEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWP 229 (288)
T ss_pred cccccChHHhcCC-----cccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhh
Confidence 4569999988542 346789999999999999999999998877766666655443333333343
No 474
>KOG0615|consensus
Probab=97.91 E-value=1.4e-06 Score=85.57 Aligned_cols=51 Identities=31% Similarity=0.781 Sum_probs=46.3
Q ss_pred cchhhhhhhHHHHHHHhCCCCCCCchhHH-HHHHHHhccccCCCCCCccCCC
Q psy3880 130 QAVDVWACGVIMYTLLVGCPPFWHRKQMV-MLRNIMEGKYSFSSPEWNDISG 180 (408)
Q Consensus 130 ~~~DiwSlGvil~~ll~G~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~ 180 (408)
.++|+||+||++|.+++|.+||.+..... +..+|..|+|.|.++.|..++.
T Consensus 360 ~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~f~p~~w~~Ise 411 (475)
T KOG0615|consen 360 SKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRYAFGPLQWDRISE 411 (475)
T ss_pred chheeeeccceEEEEeccCCCcccccCCccHHHHHhcCcccccChhhhhhhH
Confidence 58999999999999999999999988666 8899999999999999987753
No 475
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=97.90 E-value=3.4e-06 Score=76.42 Aligned_cols=71 Identities=25% Similarity=0.396 Sum_probs=48.0
Q ss_pred HHHHHHHHh--hch-hhHHhhhCCHHHHHHHHHHHHHHHHH-HHHCCCeeccCCCCcEEEecCCCEEEeccccchh
Q psy3880 24 KHLAAQVVD--KGE-AAVQDIINSNPALRYIMRQLFEALEH-VHNHSVVHRDLKPENILLDDQMNVKLTDFGFARV 95 (408)
Q Consensus 24 ~~lv~e~~~--~g~-~~l~~~~~~~~~~r~i~~qil~aL~~-LH~~~IvHRDLKp~NILl~~~~~iKl~DFGla~~ 95 (408)
..|||||+. |.. ..|.+...+.++...++.+++..+.. +|+.||||+||.+.|||++++ .+.++|||.|..
T Consensus 81 ~~ivME~I~~~G~~~~~l~~~~~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~~NIlv~~~-~~~iIDf~qav~ 155 (188)
T PF01163_consen 81 NVIVMEYIGEDGVPLPRLKDVDLSPEEPKELLEEILEEIIKMLHKAGIVHGDLSEYNILVDDG-KVYIIDFGQAVD 155 (188)
T ss_dssp TEEEEE--EETTEEGGCHHHCGGGGSTHHHHHHHHHHHHHHHHHCTTEEESS-STTSEEEETT-CEEE--GTTEEE
T ss_pred CEEEEEecCCCccchhhHHhccccchhHHHHHHHHHHHHHHHHHhcCceecCCChhhEEeecc-eEEEEecCccee
Confidence 358999998 543 11222221235677888899886665 579999999999999999887 899999997754
No 476
>KOG0598|consensus
Probab=97.88 E-value=1.3e-05 Score=77.87 Aligned_cols=37 Identities=35% Similarity=0.849 Sum_probs=34.9
Q ss_pred hhhhhhHHHHHHHhCCCCCCCchhHHHHHHHHhcccc
Q psy3880 133 DVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYS 169 (408)
Q Consensus 133 DiwSlGvil~~ll~G~~pf~~~~~~~~~~~i~~~~~~ 169 (408)
|+||+||++|+|++|.+||.+.+...+.++|..++..
T Consensus 207 DWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k~~ 243 (357)
T KOG0598|consen 207 DWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGKLP 243 (357)
T ss_pred chHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCcCC
Confidence 8999999999999999999999999999999998833
No 477
>KOG0592|consensus
Probab=97.88 E-value=1.1e-05 Score=81.88 Aligned_cols=42 Identities=33% Similarity=0.784 Sum_probs=39.1
Q ss_pred chhhhhhhHHHHHHHhCCCCCCCchhHHHHHHHHhccccCCC
Q psy3880 131 AVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSS 172 (408)
Q Consensus 131 ~~DiwSlGvil~~ll~G~~pf~~~~~~~~~~~i~~~~~~~~~ 172 (408)
.+|+|+||||+|.|+.|.+||.+.++-..+++|+...|.|..
T Consensus 267 ~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~~l~y~fp~ 308 (604)
T KOG0592|consen 267 SSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQALDYEFPE 308 (604)
T ss_pred ccchHHHHHHHHHHhcCCCCCccccHHHHHHHHHHhcccCCC
Confidence 689999999999999999999999999999999998887653
No 478
>KOG0658|consensus
Probab=97.86 E-value=1.2e-05 Score=78.00 Aligned_cols=56 Identities=32% Similarity=0.482 Sum_probs=46.9
Q ss_pred ccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhc
Q psy3880 176 NDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEG 236 (408)
Q Consensus 176 ~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~ 236 (408)
....-|.|||.+.+ ++.|+.++|+||+||++++|+-|.|=|.+++....+..|.+-
T Consensus 186 icSRyYRaPELifg-----a~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~ 241 (364)
T KOG0658|consen 186 ICSRYYRAPELIFG-----ATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKV 241 (364)
T ss_pred EEeccccCHHHHcC-----ccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHH
Confidence 34445999999875 467999999999999999999999999999887777776653
No 479
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=97.85 E-value=1.5e-05 Score=76.00 Aligned_cols=51 Identities=31% Similarity=0.501 Sum_probs=41.0
Q ss_pred CCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHH
Q psy3880 178 ISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIM 234 (408)
Q Consensus 178 ~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~ 234 (408)
...|++||++... .|+.++|+||+||++|+|++|.+||.+......+..+.
T Consensus 170 ~~~y~aPE~~~~~------~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~ 220 (288)
T cd07863 170 TLWYRAPEVLLQS------TYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIF 220 (288)
T ss_pred cccccCchHhhCC------CCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHH
Confidence 4569999998643 46789999999999999999999998776655555444
No 480
>KOG0589|consensus
Probab=97.85 E-value=1.6e-05 Score=79.90 Aligned_cols=55 Identities=22% Similarity=0.420 Sum_probs=46.9
Q ss_pred CccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHh
Q psy3880 175 WNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIME 235 (408)
Q Consensus 175 ~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~ 235 (408)
..+++.||.||.+.+. +|+.++||||+||++|+|++-+++|.+.+...+..+|..
T Consensus 166 vvGTp~YmcPEil~d~------pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~ 220 (426)
T KOG0589|consen 166 VVGTPYYMCPEILSDI------PYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINR 220 (426)
T ss_pred ecCCCcccCHHHhCCC------CCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhh
Confidence 4577889999999774 688999999999999999999999988877776666654
No 481
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=97.84 E-value=1.3e-05 Score=79.68 Aligned_cols=55 Identities=29% Similarity=0.469 Sum_probs=45.3
Q ss_pred ccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhc
Q psy3880 176 NDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEG 236 (408)
Q Consensus 176 ~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~ 236 (408)
.....|++||++... .|+.++|+||+||++|+|++|.+||.+.+.......+...
T Consensus 186 ~~t~~y~aPE~~~~~------~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~ 240 (364)
T cd07875 186 VVTRYYRAPEVILGM------GYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQ 240 (364)
T ss_pred cccCCcCCHHHHhCC------CCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHh
Confidence 345679999998653 4678999999999999999999999988877777666543
No 482
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=97.81 E-value=1.7e-05 Score=75.63 Aligned_cols=52 Identities=35% Similarity=0.525 Sum_probs=40.9
Q ss_pred cCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHH
Q psy3880 177 DISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIM 234 (408)
Q Consensus 177 ~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~ 234 (408)
+...|++||++... .|+.++|+||+||++|+|++|.+||.+.+....+..+.
T Consensus 163 ~~~~y~aPE~~~~~------~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~ 214 (287)
T cd07848 163 ATRWYRSPELLLGA------PYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQ 214 (287)
T ss_pred cccccCCcHHHcCC------CCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 45569999998643 46779999999999999999999998776555444443
No 483
>KOG0588|consensus
Probab=97.80 E-value=1.6e-05 Score=82.52 Aligned_cols=40 Identities=38% Similarity=0.801 Sum_probs=37.5
Q ss_pred hhhhhhhHHHHHHHhCCCCCCCchhHHHHHHHHhccccCC
Q psy3880 132 VDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFS 171 (408)
Q Consensus 132 ~DiwSlGvil~~ll~G~~pf~~~~~~~~~~~i~~~~~~~~ 171 (408)
+||||||||+|.||+|+.||.+.+-..++.++..|.|...
T Consensus 193 sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~f~MP 232 (786)
T KOG0588|consen 193 SDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGVFEMP 232 (786)
T ss_pred cccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCcccCC
Confidence 4999999999999999999999999999999999998654
No 484
>KOG0582|consensus
Probab=97.80 E-value=2.1e-05 Score=78.21 Aligned_cols=63 Identities=25% Similarity=0.467 Sum_probs=51.7
Q ss_pred CCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCCC
Q psy3880 173 PEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYS 239 (408)
Q Consensus 173 ~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~~ 239 (408)
..+.++..||+||++. ++..+|+.++||||+|+...+|.+|..||..-.++.++..-+++.+.
T Consensus 188 ~tfvgtp~wmAPEvl~----q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp 250 (516)
T KOG0582|consen 188 NTFVGTPCWMAPEVLM----QQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPP 250 (516)
T ss_pred ccccCcccccChHHhh----hcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCC
Confidence 4566778899999984 45679999999999999999999999999988777766555555443
No 485
>PHA03212 serine/threonine kinase US3; Provisional
Probab=97.79 E-value=3.4e-05 Score=77.92 Aligned_cols=44 Identities=27% Similarity=0.734 Sum_probs=36.7
Q ss_pred CccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCc
Q psy3880 175 WNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHR 224 (408)
Q Consensus 175 ~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~ 224 (408)
+.++..|++||++... .|+.++|+||+||++|+|++|.+||+..
T Consensus 243 ~~gt~~y~aPE~~~~~------~~~~~~DiwSlGvil~elltg~~p~~~~ 286 (391)
T PHA03212 243 WAGTIATNAPELLARD------PYGPAVDIWSAGIVLFEMATCHDSLFEK 286 (391)
T ss_pred ccCccCCCChhhhcCC------CCCcHHHHHHHHHHHHHHHHCCCCcCCc
Confidence 3456779999998643 4788999999999999999999988754
No 486
>KOG0695|consensus
Probab=97.78 E-value=1.1e-05 Score=77.56 Aligned_cols=43 Identities=42% Similarity=0.884 Sum_probs=38.4
Q ss_pred CCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCC
Q psy3880 174 EWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFW 222 (408)
Q Consensus 174 ~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~ 222 (408)
.+.+++.|++||++++. .||..+|+|++||+|++|..|+.||.
T Consensus 410 tfcgtpnyiapeilrge------eygfsvdwwalgvlmfemmagrspfd 452 (593)
T KOG0695|consen 410 TFCGTPNYIAPEILRGE------EYGFSVDWWALGVLMFEMMAGRSPFD 452 (593)
T ss_pred cccCCCcccchhhhccc------ccCceehHHHHHHHHHHHHcCCCCcc
Confidence 35677789999999975 58999999999999999999999994
No 487
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=97.78 E-value=1.7e-05 Score=78.59 Aligned_cols=54 Identities=30% Similarity=0.429 Sum_probs=43.5
Q ss_pred ccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHh
Q psy3880 176 NDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIME 235 (408)
Q Consensus 176 ~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~ 235 (408)
.....|++||++... .|+.++|+||+||++|+|++|.+||.+.........+..
T Consensus 179 ~~t~~y~aPE~~~~~------~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~ 232 (355)
T cd07874 179 VVTRYYRAPEVILGM------GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIE 232 (355)
T ss_pred cccCCccCHHHHcCC------CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 345679999998653 467899999999999999999999998876665555544
No 488
>KOG2384|consensus
Probab=97.77 E-value=2.4e-05 Score=69.26 Aligned_cols=44 Identities=25% Similarity=0.728 Sum_probs=39.8
Q ss_pred ccccccccccccchhHHHHHhcCCCCCCCCCCCCCCcccccccc
Q psy3880 364 LSDYKEFKLKEDNVGFKMLQKLGWQEGSGLGTDGGGIQEPVNKI 407 (408)
Q Consensus 364 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (408)
-.-+..+.|+..|+|||.|-+-||+++.|||.+++|-+.||+.+
T Consensus 117 a~k~~p~~i~pks~GyrLl~~~GW~pe~GLGp~~~Grr~PvrTv 160 (223)
T KOG2384|consen 117 ANKFQPHLIKPKSLGYRLLSQYGWSPEAGLGPENQGRRAPVRTV 160 (223)
T ss_pred CCCCCCCcCCCCCchHHHHHhcCCCcccCCCccccCcccchhHH
Confidence 34466889999999999999999999999999999999999754
No 489
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=97.77 E-value=3.2e-05 Score=76.02 Aligned_cols=56 Identities=32% Similarity=0.613 Sum_probs=41.8
Q ss_pred cCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHH
Q psy3880 177 DISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI 233 (408)
Q Consensus 177 ~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i 233 (408)
+...|++||++....- ....++.++|+||+||++|+|++|..||...+..+....+
T Consensus 165 gt~~y~aPE~~~~~~~-~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i 220 (331)
T cd05597 165 GTPDYISPEILQAMED-GKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKI 220 (331)
T ss_pred ccccccCHHHHhhccc-cccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHH
Confidence 4567999999864211 1234678999999999999999999999876655554443
No 490
>KOG0578|consensus
Probab=97.76 E-value=2.4e-05 Score=79.84 Aligned_cols=52 Identities=29% Similarity=0.633 Sum_probs=43.7
Q ss_pred ccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHH
Q psy3880 176 NDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI 233 (408)
Q Consensus 176 ~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i 233 (408)
.++..|||||++..+ .||.++||||||+..-+|+-|.|||..+++..-+..|
T Consensus 430 VGTPYWMAPEVvtrk------~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLI 481 (550)
T KOG0578|consen 430 VGTPYWMAPEVVTRK------PYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLI 481 (550)
T ss_pred cCCCCccchhhhhhc------ccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHH
Confidence 467779999999765 5899999999999999999999999987765544444
No 491
>KOG0594|consensus
Probab=97.76 E-value=3.6e-05 Score=74.50 Aligned_cols=67 Identities=28% Similarity=0.449 Sum_probs=54.0
Q ss_pred CCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHhcCCCCCCCcCCCCC
Q psy3880 178 ISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDIS 249 (408)
Q Consensus 178 ~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~~~~~f~~~~~~~iS 249 (408)
+..|.+||+|.+. ..|+..+||||+|||+++|.++.+=|.+.+..+.+..|-+---......|+.++
T Consensus 183 TlWYRaPEvLlGs-----~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~ 249 (323)
T KOG0594|consen 183 TLWYRAPEVLLGS-----TSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVS 249 (323)
T ss_pred EeeccCHHHhcCC-----CcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCcc
Confidence 3449999998764 358999999999999999999999999999888888877655455556676654
No 492
>KOG0612|consensus
Probab=97.73 E-value=2.9e-05 Score=84.85 Aligned_cols=51 Identities=37% Similarity=0.689 Sum_probs=44.8
Q ss_pred CCcchhhhhhhHHHHHHHhCCCCCCCchhHHHHHHHHhccccCCCCCCccC
Q psy3880 128 YGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDI 178 (408)
Q Consensus 128 ~~~~~DiwSlGvil~~ll~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 178 (408)
||..||+||+||++|||+.|..||+..+-.+...+|+.-+-++..|.-.++
T Consensus 258 yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~~l~FP~~~~V 308 (1317)
T KOG0612|consen 258 YGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKESLSFPDETDV 308 (1317)
T ss_pred cCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhhhcCCCccccc
Confidence 788999999999999999999999999999999999998777766644343
No 493
>KOG0201|consensus
Probab=97.71 E-value=1.5e-05 Score=78.96 Aligned_cols=129 Identities=21% Similarity=0.218 Sum_probs=76.5
Q ss_pred HHHHHHHHHCCCeeccCCCCcEEEecCCCEEEeccccchhcccCc--ccccCCCCCcccChhhhhhccccCcCCCCcchh
Q psy3880 56 FEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGE--KLMDLCGTPGYLAPEVLRANMFEDATGYGQAVD 133 (408)
Q Consensus 56 l~aL~~LH~~~IvHRDLKp~NILl~~~~~iKl~DFGla~~~~~~~--~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~~~D 133 (408)
+-.+-.-|.-|.+|..||+.|++-.....+.+.++..+..+...+ ...+.-++.....-+ ..+-
T Consensus 86 LwiiMey~~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~--------------g~vk 151 (467)
T KOG0201|consen 86 LWIIMEYCGGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSES--------------GDVK 151 (467)
T ss_pred HHHHHHHhcCcchhhhhccCCCCccceeeeehHHHHHHhhhhhhcceecccccccceeEecc--------------CcEE
Confidence 344445567899999999999984445567777776554332211 111111111111100 1223
Q ss_pred hhhhhHHHHHHHhCCCCCCCchhHHHHHHHHhccccCCCCCCccCCCCCchHHHhhhcccccccCCCcccccchhhhHHH
Q psy3880 134 VWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYT 213 (408)
Q Consensus 134 iwSlGvil~~ll~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ 213 (408)
+|-|||-.---.+ ......+.++.-|||||++.. .+|+.++||||||++.++
T Consensus 152 l~DfgVa~ql~~~----------------------~~rr~tfvGTPfwMAPEVI~~------~~Y~~KADIWSLGITaiE 203 (467)
T KOG0201|consen 152 LADFGVAGQLTNT----------------------VKRRKTFVGTPFWMAPEVIKQ------SGYDTKADIWSLGITAIE 203 (467)
T ss_pred EEecceeeeeech----------------------hhccccccccccccchhhhcc------ccccchhhhhhhhHHHHH
Confidence 3444442110000 001123456677999999974 478999999999999999
Q ss_pred hhcCCCCCCCchh
Q psy3880 214 LLVGCPPFWHRKQ 226 (408)
Q Consensus 214 ll~g~~Pf~~~~~ 226 (408)
|+.|.||+....+
T Consensus 204 la~GePP~s~~hP 216 (467)
T KOG0201|consen 204 LAKGEPPHSKLHP 216 (467)
T ss_pred HhcCCCCCcccCc
Confidence 9999999976554
No 494
>KOG3087|consensus
Probab=97.71 E-value=0.00013 Score=65.21 Aligned_cols=50 Identities=32% Similarity=0.545 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEecCC---CEEEeccccchh
Q psy3880 46 PALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQM---NVKLTDFGFARV 95 (408)
Q Consensus 46 ~~~r~i~~qil~aL~~LH~~~IvHRDLKp~NILl~~~~---~iKl~DFGla~~ 95 (408)
+....+++.|-+.+.-||.++|||.||..+||++..++ .+.++|||++..
T Consensus 113 ~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 113 EGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSDGNQITPILIDFGLSSV 165 (229)
T ss_pred hhHHHHHHHHHHHHHHhhhCCeecccccccceEEecCCCcCceEEEeecchhc
Confidence 33478899999999999999999999999999997655 358999999864
No 495
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=97.70 E-value=3.4e-05 Score=75.96 Aligned_cols=54 Identities=37% Similarity=0.543 Sum_probs=42.9
Q ss_pred cCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHh
Q psy3880 177 DISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIME 235 (408)
Q Consensus 177 ~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~ 235 (408)
....|++||++... ..|+.++|+||+||++|+|++|.+||.+.+....+..+..
T Consensus 177 ~t~~y~aPE~~~~~-----~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~ 230 (343)
T cd07878 177 ATRWYRAPEIMLNW-----MHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIME 230 (343)
T ss_pred ccccccCchHhcCC-----ccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
Confidence 45669999998642 2477899999999999999999999988776666655544
No 496
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=97.69 E-value=2.9e-05 Score=77.57 Aligned_cols=53 Identities=32% Similarity=0.466 Sum_probs=43.3
Q ss_pred CCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHh
Q psy3880 178 ISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIME 235 (408)
Q Consensus 178 ~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~ 235 (408)
...|++||.+... ..|+.++|+||+||++|+|++|.+||.+.+....+..|..
T Consensus 167 ~~~y~aPE~~~~~-----~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~ 219 (372)
T cd07853 167 TQYYRAPEILMGS-----RHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITD 219 (372)
T ss_pred CCCcCCHHHHcCC-----CCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHH
Confidence 4569999998642 2367789999999999999999999998887776666654
No 497
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=97.69 E-value=2.9e-05 Score=76.24 Aligned_cols=49 Identities=22% Similarity=0.445 Sum_probs=39.5
Q ss_pred ccCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHH
Q psy3880 176 NDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVML 230 (408)
Q Consensus 176 ~~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~ 230 (408)
.....|++||.+... .|+.++|+||+||++|+|++|..||......++.
T Consensus 163 ~g~~~y~aPE~~~~~------~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~ 211 (331)
T cd06649 163 VGTRSYMSPERLQGT------HYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELE 211 (331)
T ss_pred CCCcCcCCHhHhcCC------CCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 345679999998643 4677999999999999999999999776655443
No 498
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=97.69 E-value=2.5e-05 Score=77.49 Aligned_cols=53 Identities=32% Similarity=0.534 Sum_probs=42.2
Q ss_pred cCCCCCchHHHhhhcccccccCCCcccccchhhhHHHhhcCCCCCCCchhHHHHHHHHh
Q psy3880 177 DISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIME 235 (408)
Q Consensus 177 ~~~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~g~~Pf~~~~~~~~~~~i~~ 235 (408)
....|++||++... .|+.++|+||+||++|+|++|.+||.+.+.......+.+
T Consensus 184 ~t~~y~aPE~~~~~------~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~ 236 (359)
T cd07876 184 VTRYYRAPEVILGM------GYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIE 236 (359)
T ss_pred ccCCCCCchhccCC------CCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 34569999998653 467799999999999999999999998776655555443
No 499
>KOG0696|consensus
Probab=97.68 E-value=4e-05 Score=75.63 Aligned_cols=38 Identities=37% Similarity=0.744 Sum_probs=35.2
Q ss_pred hhhhhHHHHHHHhCCCCCCCchhHHHHHHHHhccccCC
Q psy3880 134 VWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFS 171 (408)
Q Consensus 134 iwSlGvil~~ll~G~~pf~~~~~~~~~~~i~~~~~~~~ 171 (408)
+||+||++|||+.|++||.++++.++++.|++...+|.
T Consensus 533 WWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehnvsyP 570 (683)
T KOG0696|consen 533 WWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHNVSYP 570 (683)
T ss_pred HHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHccCcCc
Confidence 79999999999999999999999999999998876653
No 500
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=97.66 E-value=3.5e-05 Score=73.05 Aligned_cols=42 Identities=21% Similarity=0.628 Sum_probs=34.9
Q ss_pred CCCCchHHHhhhcccccccCCCcccccchhhhHHHhhc-CCCCCCCchh
Q psy3880 179 SGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPFWHRKQ 226 (408)
Q Consensus 179 ~~~~~PE~l~~~~~~~~~~y~~~~DiWs~Gvily~ll~-g~~Pf~~~~~ 226 (408)
..|++||.+... .++.++|+||+||++|+|++ |..||.....
T Consensus 188 ~~y~aPE~~~~~------~~~~~~Di~slG~il~e~~~~g~~p~~~~~~ 230 (280)
T cd05049 188 IRWMPPESIMYR------KFTTESDVWSFGVVLWEIFTYGKQPWYGLSN 230 (280)
T ss_pred ceecChhhhccC------CcchhhhHHHHHHHHHHHHhcCCCCCCCCCH
Confidence 459999988653 46778999999999999998 9999976544
Done!