Query psy3889
Match_columns 243
No_of_seqs 231 out of 1679
Neff 6.9
Searched_HMMs 29240
Date Fri Aug 16 19:56:15 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3889.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/3889hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2c0g_A ERP29 homolog, windbeut 100.0 9.6E-46 3.3E-50 324.5 21.0 212 19-243 14-248 (248)
2 2qc7_A ERP31, ERP28, endoplasm 100.0 6.1E-44 2.1E-48 311.7 19.2 203 19-234 3-224 (240)
3 3h79_A Thioredoxin-like protei 99.8 1.2E-18 4.1E-23 135.0 9.8 82 19-107 13-103 (127)
4 3zzx_A Thioredoxin; oxidoreduc 99.7 7.6E-18 2.6E-22 128.2 8.8 78 24-111 3-88 (105)
5 3qou_A Protein YBBN; thioredox 99.7 7.2E-17 2.5E-21 141.2 16.2 78 18-104 4-88 (287)
6 2qgv_A Hydrogenase-1 operon pr 99.7 2.1E-17 7.1E-22 132.8 8.3 81 22-111 18-106 (140)
7 3us3_A Calsequestrin-1; calciu 99.7 4E-17 1.4E-21 149.1 11.2 92 19-124 11-124 (367)
8 2qsi_A Putative hydrogenase ex 99.7 4.2E-17 1.4E-21 130.6 9.2 84 19-111 13-104 (137)
9 3ga4_A Dolichyl-diphosphooligo 99.7 6.2E-17 2.1E-21 135.0 10.0 84 19-107 16-114 (178)
10 3gnj_A Thioredoxin domain prot 99.7 1.2E-16 4.1E-21 119.6 10.3 79 21-108 4-88 (111)
11 3uvt_A Thioredoxin domain-cont 99.7 6.5E-17 2.2E-21 120.8 8.6 80 19-106 3-88 (111)
12 2dml_A Protein disulfide-isome 99.7 3.1E-16 1.1E-20 121.0 11.2 80 20-108 16-101 (130)
13 3tco_A Thioredoxin (TRXA-1); d 99.7 1.9E-16 6.6E-21 117.6 9.3 79 20-107 3-86 (109)
14 1x5d_A Protein disulfide-isome 99.7 1.6E-16 5.6E-21 122.7 8.7 80 19-105 5-92 (133)
15 1thx_A Thioredoxin, thioredoxi 99.7 7.1E-16 2.4E-20 115.8 11.3 80 19-107 5-90 (115)
16 2av4_A Thioredoxin-like protei 99.7 1.3E-16 4.6E-21 130.3 7.8 78 23-109 23-108 (160)
17 3hxs_A Thioredoxin, TRXP; elec 99.7 5.3E-16 1.8E-20 121.5 10.8 77 19-104 20-113 (141)
18 2r2j_A Thioredoxin domain-cont 99.6 1.4E-16 4.8E-21 145.9 7.8 86 20-114 4-111 (382)
19 2trx_A Thioredoxin; electron t 99.6 3.7E-16 1.3E-20 116.5 8.7 78 21-107 2-85 (108)
20 1sji_A Calsequestrin 2, calseq 99.6 7.2E-16 2.5E-20 139.4 12.1 91 19-124 9-122 (350)
21 2voc_A Thioredoxin; electron t 99.6 5.1E-16 1.7E-20 117.5 9.2 73 22-104 2-79 (112)
22 2l5l_A Thioredoxin; structural 99.6 7.6E-16 2.6E-20 120.8 10.4 75 20-103 8-99 (136)
23 3hz4_A Thioredoxin; NYSGXRC, P 99.6 4.7E-16 1.6E-20 122.7 9.2 84 19-111 4-93 (140)
24 2dj3_A Protein disulfide-isome 99.6 1.1E-16 3.8E-21 124.1 5.2 82 18-106 4-91 (133)
25 1mek_A Protein disulfide isome 99.6 3.8E-16 1.3E-20 117.7 7.9 81 20-107 6-92 (120)
26 3die_A Thioredoxin, TRX; elect 99.6 6.8E-16 2.3E-20 114.3 9.1 76 21-106 3-83 (106)
27 1nsw_A Thioredoxin, TRX; therm 99.6 7.7E-16 2.6E-20 114.2 9.3 75 23-106 2-81 (105)
28 2dj1_A Protein disulfide-isome 99.6 5.4E-16 1.9E-20 121.2 8.9 80 20-106 16-101 (140)
29 3qfa_C Thioredoxin; protein-pr 99.6 4.7E-16 1.6E-20 118.9 8.3 83 19-111 10-99 (116)
30 2ppt_A Thioredoxin-2; thiredox 99.6 6.1E-16 2.1E-20 124.9 9.4 79 20-107 46-129 (155)
31 1dby_A Chloroplast thioredoxin 99.6 7.7E-16 2.6E-20 114.6 9.3 78 22-108 2-85 (107)
32 1t00_A Thioredoxin, TRX; redox 99.6 8.3E-16 2.8E-20 115.5 9.5 78 21-107 5-88 (112)
33 3aps_A DNAJ homolog subfamily 99.6 9.7E-16 3.3E-20 117.0 9.9 83 20-111 2-90 (122)
34 2yzu_A Thioredoxin; redox prot 99.6 8E-16 2.7E-20 114.0 9.1 76 22-106 2-82 (109)
35 2e0q_A Thioredoxin; electron t 99.6 9.3E-16 3.2E-20 112.6 9.0 75 23-107 1-80 (104)
36 1gh2_A Thioredoxin-like protei 99.6 1.1E-15 3.7E-20 114.3 9.4 77 23-109 3-87 (107)
37 1r26_A Thioredoxin; redox-acti 99.6 1E-15 3.5E-20 119.2 9.3 78 22-109 20-103 (125)
38 3d6i_A Monothiol glutaredoxin- 99.6 1.8E-15 6.3E-20 113.7 10.3 82 22-111 1-91 (112)
39 3p2a_A Thioredoxin 2, putative 99.6 1.3E-15 4.4E-20 120.8 9.9 79 19-106 36-119 (148)
40 2i4a_A Thioredoxin; acidophIle 99.6 1.1E-15 3.8E-20 113.3 8.8 78 21-107 2-85 (107)
41 2o8v_B Thioredoxin 1; disulfid 99.6 6.8E-16 2.3E-20 120.4 7.8 82 17-107 18-105 (128)
42 2pu9_C TRX-F, thioredoxin F-ty 99.6 1.6E-15 5.3E-20 114.2 9.5 82 19-109 3-91 (111)
43 1w4v_A Thioredoxin, mitochondr 99.6 1.1E-15 3.9E-20 117.0 8.6 80 19-107 11-96 (119)
44 1x5e_A Thioredoxin domain cont 99.6 1E-15 3.4E-20 117.9 8.1 76 19-104 5-85 (126)
45 1faa_A Thioredoxin F; electron 99.6 7.4E-16 2.5E-20 118.2 7.0 84 17-109 14-104 (124)
46 2b5e_A Protein disulfide-isome 99.6 1.1E-15 3.8E-20 144.2 9.7 78 19-104 12-94 (504)
47 3ed3_A Protein disulfide-isome 99.6 2.5E-15 8.7E-20 133.9 11.2 82 17-105 13-100 (298)
48 2es7_A Q8ZP25_salty, putative 99.6 1.1E-15 3.9E-20 122.4 7.8 82 22-111 18-106 (142)
49 1fb6_A Thioredoxin M; electron 99.6 2.9E-15 9.9E-20 110.7 9.2 76 23-107 2-83 (105)
50 4euy_A Uncharacterized protein 99.6 3.3E-16 1.1E-20 117.1 4.0 71 27-107 7-82 (105)
51 3f8u_A Protein disulfide-isome 99.6 1.4E-15 4.8E-20 142.4 9.2 89 21-124 1-109 (481)
52 1oaz_A Thioredoxin 1; immune s 99.6 1.2E-15 4.1E-20 118.3 7.3 78 20-106 2-99 (123)
53 1ep7_A Thioredoxin CH1, H-type 99.6 3E-15 1E-19 112.2 9.1 79 21-108 2-90 (112)
54 2i1u_A Thioredoxin, TRX, MPT46 99.6 2.9E-15 1E-19 113.8 9.1 77 19-104 10-92 (121)
55 3q6o_A Sulfhydryl oxidase 1; p 99.6 2.9E-15 1E-19 128.6 10.2 80 20-104 11-97 (244)
56 3f3q_A Thioredoxin-1; His TAG, 99.6 3.4E-15 1.2E-19 112.7 9.1 82 20-111 6-92 (109)
57 2vlu_A Thioredoxin, thioredoxi 99.6 5.4E-15 1.9E-19 112.8 9.8 84 16-109 8-100 (122)
58 1syr_A Thioredoxin; SGPP, stru 99.6 4.3E-15 1.5E-19 112.2 8.8 81 17-107 5-90 (112)
59 3idv_A Protein disulfide-isome 99.6 3.5E-15 1.2E-19 126.3 9.2 89 19-116 13-118 (241)
60 3apq_A DNAJ homolog subfamily 99.6 4.8E-15 1.6E-19 124.7 9.9 79 19-106 95-178 (210)
61 2djj_A PDI, protein disulfide- 99.6 2.2E-15 7.4E-20 114.7 7.0 78 19-106 5-91 (121)
62 2wz9_A Glutaredoxin-3; protein 99.6 6.2E-15 2.1E-19 118.1 9.2 77 18-104 9-93 (153)
63 2xc2_A Thioredoxinn; oxidoredu 99.6 5E-15 1.7E-19 112.5 8.1 78 20-108 12-97 (117)
64 3idv_A Protein disulfide-isome 99.6 7.7E-15 2.6E-19 124.2 10.0 78 20-104 129-212 (241)
65 3uem_A Protein disulfide-isome 99.6 3.8E-15 1.3E-19 134.4 8.3 77 19-104 247-329 (361)
66 1xwb_A Thioredoxin; dimerizati 99.6 1E-14 3.4E-19 107.9 9.1 77 23-108 2-86 (106)
67 3dxb_A Thioredoxin N-terminall 99.6 6.9E-15 2.4E-19 124.9 9.2 91 18-119 9-117 (222)
68 2dj0_A Thioredoxin-related tra 99.6 5.2E-15 1.8E-19 116.0 7.7 85 19-111 5-102 (137)
69 1xfl_A Thioredoxin H1; AT3G510 99.6 1.2E-14 4.1E-19 112.5 9.2 81 18-108 13-103 (124)
70 3m9j_A Thioredoxin; oxidoreduc 99.6 1.3E-14 4.4E-19 107.3 8.8 75 27-111 7-88 (105)
71 3evi_A Phosducin-like protein 99.6 1.1E-14 3.8E-19 113.3 8.6 78 21-111 3-88 (118)
72 2vim_A Thioredoxin, TRX; thior 99.5 2E-14 6.9E-19 105.9 9.1 76 23-108 1-84 (104)
73 3emx_A Thioredoxin; structural 99.5 8E-15 2.7E-19 115.0 7.1 85 19-111 14-107 (135)
74 1v98_A Thioredoxin; oxidoreduc 99.5 1.5E-14 5E-19 113.6 8.2 80 21-109 33-117 (140)
75 2vm1_A Thioredoxin, thioredoxi 99.5 3.5E-14 1.2E-18 107.1 9.4 79 21-109 6-94 (118)
76 1ti3_A Thioredoxin H, PTTRXH1; 99.5 3E-14 1E-18 106.7 8.7 78 21-108 4-91 (113)
77 3f8u_A Protein disulfide-isome 99.5 1.8E-14 6.1E-19 134.9 8.7 77 20-104 351-433 (481)
78 2l6c_A Thioredoxin; oxidoreduc 99.5 3.3E-14 1.1E-18 107.4 8.6 78 23-111 5-87 (110)
79 1zma_A Bacterocin transport ac 99.5 1.2E-14 4.3E-19 110.6 6.2 85 17-107 8-98 (118)
80 2l57_A Uncharacterized protein 99.5 1.4E-14 4.7E-19 111.5 6.5 75 21-104 4-90 (126)
81 2j23_A Thioredoxin; immune pro 99.5 3.4E-14 1.2E-18 109.1 8.4 80 21-108 15-100 (121)
82 2f51_A Thioredoxin; electron t 99.5 5E-14 1.7E-18 108.0 8.8 75 21-105 3-85 (118)
83 3gix_A Thioredoxin-like protei 99.5 2.3E-14 7.9E-19 114.9 6.8 76 25-109 8-90 (149)
84 3d22_A TRXH4, thioredoxin H-ty 99.5 7.5E-14 2.6E-18 109.1 9.4 78 20-107 23-110 (139)
85 3ul3_B Thioredoxin, thioredoxi 99.5 1.4E-14 4.8E-19 112.2 5.2 74 24-106 28-106 (128)
86 2oe3_A Thioredoxin-3; electron 99.5 5.3E-14 1.8E-18 107.3 8.2 77 23-109 14-96 (114)
87 1qgv_A Spliceosomal protein U5 99.5 2.5E-14 8.7E-19 113.8 6.2 74 27-109 10-90 (142)
88 1a8l_A Protein disulfide oxido 99.5 1.1E-13 3.6E-18 116.6 10.4 80 22-108 117-204 (226)
89 3apo_A DNAJ homolog subfamily 99.5 3.4E-14 1.2E-18 140.6 7.3 90 20-124 115-221 (780)
90 3t58_A Sulfhydryl oxidase 1; o 99.5 1.2E-13 4.1E-18 132.1 10.1 97 20-123 11-130 (519)
91 1wou_A Thioredoxin -related pr 99.5 8.1E-14 2.8E-18 107.5 6.8 81 22-106 6-102 (123)
92 2yj7_A LPBCA thioredoxin; oxid 99.2 5.7E-15 2E-19 108.6 0.0 80 23-111 3-88 (106)
93 3cxg_A Putative thioredoxin; m 99.4 7.6E-14 2.6E-18 109.4 5.2 74 20-104 19-100 (133)
94 3qcp_A QSOX from trypanosoma b 99.4 5.9E-14 2E-18 132.6 5.3 78 20-104 22-112 (470)
95 1wmj_A Thioredoxin H-type; str 99.4 7.1E-14 2.4E-18 107.3 4.3 79 19-107 12-100 (130)
96 1a0r_P Phosducin, MEKA, PP33; 99.4 3.4E-13 1.2E-17 117.5 8.5 78 20-108 111-197 (245)
97 2b5e_A Protein disulfide-isome 99.4 1.5E-13 5E-18 129.6 6.4 75 21-104 358-439 (504)
98 2trc_P Phosducin, MEKA, PP33; 99.4 3.7E-13 1.3E-17 114.9 7.6 80 21-111 99-187 (217)
99 2dbc_A PDCL2, unnamed protein 99.4 4.1E-13 1.4E-17 105.6 6.9 78 21-111 10-95 (135)
100 2hls_A Protein disulfide oxido 99.4 2E-12 6.9E-17 111.7 10.8 95 24-132 123-234 (243)
101 2ywm_A Glutaredoxin-like prote 99.4 2.3E-12 7.8E-17 108.9 10.5 72 21-102 118-195 (229)
102 2kuc_A Putative disulphide-iso 99.4 6.3E-13 2.2E-17 102.3 5.8 77 21-104 6-94 (130)
103 2djk_A PDI, protein disulfide- 99.4 2.7E-12 9.4E-17 100.5 9.5 74 22-105 7-87 (133)
104 3apo_A DNAJ homolog subfamily 99.3 4.7E-12 1.6E-16 125.3 9.6 75 21-104 543-625 (780)
105 3fk8_A Disulphide isomerase; A 99.3 3.1E-12 1.1E-16 99.0 6.2 75 29-109 16-105 (133)
106 3iv4_A Putative oxidoreductase 99.3 3.3E-12 1.1E-16 98.7 6.2 79 22-111 7-96 (112)
107 2ywm_A Glutaredoxin-like prote 99.3 7.2E-12 2.5E-16 105.8 8.4 71 29-104 9-89 (229)
108 2fwh_A Thiol:disulfide interch 99.2 1.3E-11 4.5E-16 96.2 7.7 82 20-107 10-103 (134)
109 3ira_A Conserved protein; meth 99.2 9.8E-12 3.4E-16 102.9 7.0 118 23-165 24-164 (173)
110 1fo5_A Thioredoxin; disulfide 99.2 2.1E-11 7.3E-16 86.5 6.3 55 39-102 3-62 (85)
111 1z6n_A Hypothetical protein PA 99.2 1.8E-11 6.1E-16 100.5 5.9 74 23-106 38-120 (167)
112 1nho_A Probable thioredoxin; b 99.2 2.5E-11 8.5E-16 86.2 5.6 54 40-102 3-61 (85)
113 1a8l_A Protein disulfide oxido 99.2 6.5E-11 2.2E-15 99.4 9.1 69 28-106 9-88 (226)
114 3f9u_A Putative exported cytoc 99.2 2.2E-11 7.6E-16 98.5 5.0 73 23-104 28-138 (172)
115 3kp8_A Vkorc1/thioredoxin doma 99.1 1.8E-11 6E-16 93.0 2.1 54 38-102 12-72 (106)
116 2lst_A Thioredoxin; structural 98.7 8.8E-12 3E-16 95.9 0.0 70 28-104 9-86 (130)
117 1sen_A Thioredoxin-like protei 99.1 2.4E-11 8.4E-16 98.6 1.7 74 29-111 37-119 (164)
118 3fkf_A Thiol-disulfide oxidore 99.0 6.5E-10 2.2E-14 86.1 8.3 63 37-104 32-122 (148)
119 2b5x_A YKUV protein, TRXY; thi 99.0 5.4E-10 1.8E-14 86.5 7.8 77 24-104 15-118 (148)
120 3uem_A Protein disulfide-isome 99.0 1.5E-09 5.2E-14 97.5 10.5 92 20-120 116-230 (361)
121 2lrn_A Thiol:disulfide interch 99.0 2.6E-09 9E-14 84.1 9.8 64 37-104 28-117 (152)
122 2ju5_A Thioredoxin disulfide i 98.9 4.7E-10 1.6E-14 89.7 4.7 72 29-104 34-124 (154)
123 1ilo_A Conserved hypothetical 98.9 2E-09 6.7E-14 75.1 6.8 50 41-102 2-56 (77)
124 1zzo_A RV1677; thioredoxin fol 98.9 1E-09 3.4E-14 83.6 5.7 64 36-104 23-109 (136)
125 1i5g_A Tryparedoxin II; electr 98.9 1.6E-09 5.6E-14 84.3 6.9 66 37-104 27-116 (144)
126 1o8x_A Tryparedoxin, TRYX, TXN 98.9 1.8E-09 6.1E-14 84.5 6.9 65 37-104 27-116 (146)
127 3erw_A Sporulation thiol-disul 98.9 1.9E-09 6.7E-14 83.0 7.0 65 37-104 33-122 (145)
128 1lu4_A Soluble secreted antige 98.9 8.4E-10 2.9E-14 84.3 4.6 63 37-104 23-107 (136)
129 3s9f_A Tryparedoxin; thioredox 98.9 2E-09 6.9E-14 86.8 7.1 66 37-104 47-136 (165)
130 1o73_A Tryparedoxin; electron 98.9 2E-09 6.7E-14 83.6 6.6 66 37-104 27-116 (144)
131 3hcz_A Possible thiol-disulfid 98.9 3E-09 1E-13 82.3 7.6 60 37-104 30-119 (148)
132 3dml_A Putative uncharacterize 98.9 7.6E-10 2.6E-14 85.9 3.8 71 36-111 16-91 (116)
133 2h30_A Thioredoxin, peptide me 98.9 4.9E-10 1.7E-14 88.8 2.3 80 22-104 22-129 (164)
134 3or5_A Thiol:disulfide interch 98.9 2.4E-09 8.3E-14 84.7 6.2 72 25-104 21-124 (165)
135 2fgx_A Putative thioredoxin; N 98.9 2E-09 6.7E-14 82.4 5.1 57 40-107 30-90 (107)
136 2hls_A Protein disulfide oxido 98.9 4E-09 1.4E-13 90.9 7.5 68 29-103 15-93 (243)
137 2lja_A Putative thiol-disulfid 98.9 7.5E-09 2.6E-13 80.8 8.5 65 37-104 29-116 (152)
138 3raz_A Thioredoxin-related pro 98.9 5.4E-09 1.8E-13 82.1 7.6 65 37-104 23-113 (151)
139 2f9s_A Thiol-disulfide oxidore 98.8 4.9E-09 1.7E-13 82.1 6.9 65 37-104 25-111 (151)
140 3hdc_A Thioredoxin family prot 98.8 6.6E-09 2.3E-13 82.4 7.6 65 37-104 40-123 (158)
141 3fw2_A Thiol-disulfide oxidore 98.8 1.9E-08 6.3E-13 78.9 9.8 64 37-104 32-124 (150)
142 3eur_A Uncharacterized protein 98.8 5.4E-09 1.9E-13 81.3 6.4 64 37-104 30-121 (142)
143 3ph9_A Anterior gradient prote 98.8 1.3E-09 4.3E-14 88.1 2.6 76 29-111 35-116 (151)
144 3kp9_A Vkorc1/thioredoxin doma 98.8 1.7E-09 5.7E-14 96.4 3.4 63 28-102 189-257 (291)
145 2l5o_A Putative thioredoxin; s 98.8 1.8E-08 6E-13 78.8 8.4 65 37-104 27-114 (153)
146 3ewl_A Uncharacterized conserv 98.8 5.7E-09 1.9E-13 80.8 5.2 64 37-104 26-117 (142)
147 3gl3_A Putative thiol:disulfid 98.8 1.6E-08 5.4E-13 79.0 7.8 63 37-104 27-113 (152)
148 3ia1_A THIO-disulfide isomeras 98.8 1.4E-08 4.8E-13 79.6 6.9 60 39-104 31-117 (154)
149 3lor_A Thiol-disulfide isomera 98.7 2E-08 6.9E-13 79.0 7.4 64 37-104 29-128 (160)
150 1hyu_A AHPF, alkyl hydroperoxi 98.7 3.6E-08 1.2E-12 93.6 10.2 71 22-102 100-176 (521)
151 4evm_A Thioredoxin family prot 98.7 1.9E-08 6.4E-13 76.1 6.6 64 37-104 21-112 (138)
152 2b1k_A Thiol:disulfide interch 98.7 1.6E-08 5.5E-13 80.7 6.3 61 36-103 49-132 (168)
153 3eyt_A Uncharacterized protein 98.7 3.4E-08 1.2E-12 77.7 7.8 65 37-104 27-125 (158)
154 1ttz_A Conserved hypothetical 98.7 7.1E-09 2.4E-13 76.1 3.2 51 42-102 3-53 (87)
155 1kng_A Thiol:disulfide interch 98.7 1.3E-08 4.6E-13 79.6 4.8 61 37-103 41-124 (156)
156 4fo5_A Thioredoxin-like protei 98.7 4E-08 1.4E-12 76.4 6.7 64 37-104 31-121 (143)
157 3kcm_A Thioredoxin family prot 98.6 4.8E-08 1.7E-12 76.3 7.0 65 37-104 27-114 (154)
158 2lrt_A Uncharacterized protein 98.6 3E-08 1E-12 78.5 5.8 65 37-104 34-121 (152)
159 2lus_A Thioredoxion; CR-Trp16, 98.1 3.3E-09 1.1E-13 82.0 0.0 66 37-104 24-116 (143)
160 2dlx_A UBX domain-containing p 98.6 9.3E-08 3.2E-12 77.3 8.5 69 29-104 29-109 (153)
161 3lwa_A Secreted thiol-disulfid 98.6 5.8E-08 2E-12 78.7 7.0 40 37-79 58-107 (183)
162 3ha9_A Uncharacterized thiored 98.6 1.3E-07 4.5E-12 75.1 8.6 63 37-104 36-138 (165)
163 2cvb_A Probable thiol-disulfid 98.5 1.1E-07 3.9E-12 77.3 6.1 64 37-104 32-124 (188)
164 3kh7_A Thiol:disulfide interch 98.5 1.7E-07 5.7E-12 76.1 6.8 61 37-104 57-140 (176)
165 4f9z_D Endoplasmic reticulum r 98.5 1E-06 3.4E-11 74.6 11.8 78 20-104 112-197 (227)
166 1jfu_A Thiol:disulfide interch 98.5 4.1E-07 1.4E-11 73.6 8.1 60 37-99 59-123 (186)
167 1ego_A Glutaredoxin; electron 98.5 2.4E-07 8.2E-12 65.7 5.8 53 42-100 3-62 (85)
168 2hyx_A Protein DIPZ; thioredox 98.4 2.6E-07 8.9E-12 84.2 6.8 65 37-104 81-172 (352)
169 2e7p_A Glutaredoxin; thioredox 98.4 2.9E-07 1E-11 69.1 5.6 57 29-100 11-77 (116)
170 2k8s_A Thioredoxin; dimer, str 98.4 4.2E-07 1.4E-11 64.3 6.1 57 42-102 4-61 (80)
171 2ywi_A Hypothetical conserved 98.4 2E-07 7E-12 76.0 4.9 65 37-104 44-138 (196)
172 2rli_A SCO2 protein homolog, m 98.4 1.4E-06 4.6E-11 69.2 8.8 41 37-79 25-73 (171)
173 2ls5_A Uncharacterized protein 97.7 4.7E-08 1.6E-12 77.2 0.0 59 37-98 32-95 (159)
174 2ggt_A SCO1 protein homolog, m 98.3 1.3E-06 4.4E-11 68.8 8.1 41 37-79 22-70 (164)
175 3u5r_E Uncharacterized protein 98.3 4.2E-07 1.4E-11 76.5 5.4 65 37-104 57-151 (218)
176 4f9z_D Endoplasmic reticulum r 98.3 1.7E-06 5.9E-11 73.1 8.6 72 20-104 8-81 (227)
177 1wjk_A C330018D20RIK protein; 98.3 1E-06 3.6E-11 65.5 5.4 57 37-101 14-71 (100)
178 2k6v_A Putative cytochrome C o 98.3 9.9E-07 3.4E-11 70.0 5.4 41 37-79 34-81 (172)
179 3kij_A Probable glutathione pe 98.2 1.2E-06 4E-11 71.1 5.8 62 37-101 37-109 (180)
180 3cmi_A Peroxiredoxin HYR1; thi 98.2 3.2E-06 1.1E-10 67.7 8.2 40 37-79 31-73 (171)
181 2v1m_A Glutathione peroxidase; 98.2 1.8E-06 6.2E-11 68.2 6.6 62 37-101 30-102 (169)
182 2gs3_A PHGPX, GPX-4, phospholi 98.2 2.1E-06 7E-11 70.0 6.9 62 37-101 48-119 (185)
183 2p31_A CL683, glutathione pero 98.2 1.1E-06 3.7E-11 71.5 5.1 62 37-101 48-120 (181)
184 2p5q_A Glutathione peroxidase 98.2 1.5E-06 5.2E-11 68.8 5.6 62 37-101 31-103 (170)
185 2l4c_A Endoplasmic reticulum r 98.2 8.5E-06 2.9E-10 63.4 9.5 71 23-106 23-95 (124)
186 2obi_A PHGPX, GPX-4, phospholi 98.2 1.9E-06 6.4E-11 70.0 5.5 62 37-101 46-117 (183)
187 3dwv_A Glutathione peroxidase- 98.2 1.7E-06 5.7E-11 70.8 5.0 62 37-101 45-117 (187)
188 2f8a_A Glutathione peroxidase 98.2 3.6E-06 1.2E-10 70.6 7.1 62 37-101 46-123 (208)
189 2vup_A Glutathione peroxidase- 98.1 4.1E-06 1.4E-10 68.5 7.0 62 37-101 47-119 (190)
190 1sji_A Calsequestrin 2, calseq 98.0 1.6E-05 5.5E-10 71.2 9.0 86 20-123 122-224 (350)
191 2i3y_A Epididymal secretory gl 98.0 8.7E-06 3E-10 69.0 6.6 61 37-100 55-130 (215)
192 1xvw_A Hypothetical protein RV 98.0 4.6E-06 1.6E-10 65.6 4.1 57 37-98 34-96 (160)
193 1we0_A Alkyl hydroperoxide red 98.0 1.1E-05 3.8E-10 65.5 6.5 40 37-79 30-74 (187)
194 1kte_A Thioltransferase; redox 98.0 1.5E-05 5E-10 58.8 6.5 67 29-101 3-73 (105)
195 1zof_A Alkyl hydroperoxide-red 97.9 1E-05 3.5E-10 66.4 5.9 40 37-79 32-76 (198)
196 3us3_A Calsequestrin-1; calciu 97.9 2.3E-05 7.9E-10 71.0 8.5 86 20-123 124-226 (367)
197 2r37_A Glutathione peroxidase 97.9 1E-05 3.4E-10 68.0 5.6 61 37-100 37-112 (207)
198 1eej_A Thiol:disulfide interch 97.9 1.1E-05 3.8E-10 67.8 5.8 25 37-63 85-113 (216)
199 2bmx_A Alkyl hydroperoxidase C 97.9 1.6E-05 5.4E-10 65.2 6.5 40 37-79 44-88 (195)
200 3drn_A Peroxiredoxin, bacterio 97.9 8.1E-06 2.8E-10 64.8 4.3 58 37-99 27-90 (161)
201 2jsy_A Probable thiol peroxida 97.9 1.2E-05 3.9E-10 63.9 4.6 58 37-101 43-106 (167)
202 2cq9_A GLRX2 protein, glutared 97.8 1.6E-05 5.4E-10 61.8 4.8 67 27-101 16-85 (130)
203 1xzo_A BSSCO, hypothetical pro 97.8 3E-05 1E-09 61.5 6.3 66 37-104 32-105 (174)
204 1h75_A Glutaredoxin-like prote 97.8 2.8E-05 9.5E-10 54.4 5.4 49 42-101 3-55 (81)
205 3gyk_A 27KDA outer membrane pr 97.8 2.3E-05 8E-10 62.8 5.6 36 37-77 21-60 (175)
206 2h01_A 2-Cys peroxiredoxin; th 97.8 2.7E-05 9.4E-10 63.5 5.9 40 37-79 30-74 (192)
207 2ht9_A Glutaredoxin-2; thiored 97.7 3.8E-05 1.3E-09 61.2 5.6 66 28-101 39-107 (146)
208 1qmv_A Human thioredoxin perox 97.7 2.9E-05 1E-09 63.7 4.7 40 37-79 33-77 (197)
209 4gqc_A Thiol peroxidase, perox 97.7 6.3E-06 2.2E-10 66.4 0.6 66 30-100 25-95 (164)
210 3c1r_A Glutaredoxin-1; oxidize 97.7 3.6E-05 1.2E-09 58.8 4.8 68 28-100 15-86 (118)
211 2a4v_A Peroxiredoxin DOT5; yea 97.7 3.3E-05 1.1E-09 60.9 4.8 64 31-100 28-96 (159)
212 1xvq_A Thiol peroxidase; thior 97.7 0.00011 3.7E-09 59.2 7.9 37 37-79 43-84 (175)
213 2b7k_A SCO1 protein; metalloch 97.7 0.00012 4.2E-09 60.3 8.3 41 37-79 40-87 (200)
214 1un2_A DSBA, thiol-disulfide i 97.7 7.4E-06 2.5E-10 68.4 0.7 47 29-79 102-157 (197)
215 4g2e_A Peroxiredoxin; redox pr 97.7 1.1E-05 3.9E-10 64.1 1.6 59 37-100 29-92 (157)
216 1q98_A Thiol peroxidase, TPX; 97.6 4E-05 1.4E-09 61.1 4.5 57 37-100 42-104 (165)
217 2hze_A Glutaredoxin-1; thiored 97.6 3.8E-05 1.3E-09 58.0 4.2 65 29-101 10-80 (114)
218 1r7h_A NRDH-redoxin; thioredox 97.6 6.4E-05 2.2E-09 51.5 4.9 49 42-101 3-55 (75)
219 3ixr_A Bacterioferritin comigr 97.6 4.6E-05 1.6E-09 61.8 4.3 60 37-101 50-114 (179)
220 1uul_A Tryparedoxin peroxidase 97.6 5.9E-05 2E-09 62.2 4.9 40 37-79 35-79 (202)
221 2yzh_A Probable thiol peroxida 97.5 4.7E-05 1.6E-09 60.9 3.4 58 37-101 46-109 (171)
222 1psq_A Probable thiol peroxida 97.5 4.3E-05 1.5E-09 60.7 3.1 58 37-101 41-104 (163)
223 2c0d_A Thioredoxin peroxidase 97.5 9.3E-05 3.2E-09 62.6 5.1 52 37-93 55-111 (221)
224 1zye_A Thioredoxin-dependent p 97.5 0.00011 3.7E-09 61.9 5.5 40 37-79 55-99 (220)
225 2pn8_A Peroxiredoxin-4; thiore 97.5 8.6E-05 3E-09 62.1 4.7 52 37-93 47-103 (211)
226 2yan_A Glutaredoxin-3; oxidore 97.5 0.00022 7.4E-09 53.0 6.1 67 28-101 7-77 (105)
227 2i81_A 2-Cys peroxiredoxin; st 97.5 7.6E-05 2.6E-09 62.5 3.9 40 37-79 51-95 (213)
228 1t3b_A Thiol:disulfide interch 97.4 4.1E-05 1.4E-09 64.2 1.9 25 37-63 85-113 (211)
229 3gkn_A Bacterioferritin comigr 97.4 8.2E-05 2.8E-09 58.6 3.6 60 37-100 34-97 (163)
230 1n8j_A AHPC, alkyl hydroperoxi 97.4 0.00013 4.4E-09 59.6 4.6 59 37-100 29-96 (186)
231 3zrd_A Thiol peroxidase; oxido 97.4 0.00011 3.7E-09 61.0 4.2 57 37-100 77-139 (200)
232 3ztl_A Thioredoxin peroxidase; 97.4 0.00014 4.8E-09 61.2 4.8 40 37-79 68-112 (222)
233 3p7x_A Probable thiol peroxida 97.4 0.00015 5.2E-09 57.6 4.5 60 37-101 45-107 (166)
234 2klx_A Glutaredoxin; thioredox 97.4 0.0002 6.8E-09 51.2 4.7 52 41-101 7-60 (89)
235 1tp9_A Peroxiredoxin, PRX D (t 97.3 0.00017 5.8E-09 57.4 3.8 59 37-100 34-101 (162)
236 2wfc_A Peroxiredoxin 5, PRDX5; 97.3 0.00019 6.4E-09 57.9 4.0 59 37-100 30-97 (167)
237 3ec3_A Protein disulfide-isome 97.3 0.00057 2E-08 58.4 7.3 73 20-104 5-80 (250)
238 1nm3_A Protein HI0572; hybrid, 97.3 0.00021 7.3E-09 60.4 4.5 59 37-100 32-98 (241)
239 3h93_A Thiol:disulfide interch 97.3 0.00035 1.2E-08 56.8 5.6 38 37-78 24-65 (192)
240 3rhb_A ATGRXC5, glutaredoxin-C 97.3 0.00039 1.3E-08 52.0 5.4 65 29-101 10-78 (113)
241 1fov_A Glutaredoxin 3, GRX3; a 97.2 0.00031 1E-08 48.9 4.2 53 42-101 3-56 (82)
242 2h8l_A Protein disulfide-isome 97.2 0.0011 3.6E-08 56.6 8.5 73 20-104 5-79 (252)
243 3me7_A Putative uncharacterize 97.2 0.00062 2.1E-08 54.5 6.4 73 37-111 27-108 (170)
244 3tjj_A Peroxiredoxin-4; thiore 97.2 0.00042 1.4E-08 59.9 5.7 52 37-93 90-146 (254)
245 2pwj_A Mitochondrial peroxired 97.2 0.00024 8.3E-09 57.3 3.8 65 31-100 37-109 (171)
246 1v58_A Thiol:disulfide interch 97.1 0.00051 1.7E-08 58.6 5.4 35 37-77 96-134 (241)
247 3ctg_A Glutaredoxin-2; reduced 97.1 0.00066 2.3E-08 52.7 5.3 69 28-101 27-99 (129)
248 3qmx_A Glutaredoxin A, glutare 97.0 0.00068 2.3E-08 50.1 4.8 57 38-101 14-72 (99)
249 3hd5_A Thiol:disulfide interch 97.0 0.00058 2E-08 55.6 4.2 40 36-79 23-66 (195)
250 3h8q_A Thioredoxin reductase 3 96.9 0.0007 2.4E-08 51.1 4.2 67 28-102 7-76 (114)
251 3bj5_A Protein disulfide-isome 96.9 0.0091 3.1E-07 47.1 10.9 78 21-104 14-98 (147)
252 3uma_A Hypothetical peroxiredo 96.9 0.00058 2E-08 56.1 3.7 60 37-101 55-123 (184)
253 2khp_A Glutaredoxin; thioredox 96.9 0.0011 3.9E-08 47.2 4.6 53 41-100 7-60 (92)
254 2axo_A Hypothetical protein AT 96.9 0.0016 5.6E-08 57.1 6.3 62 39-102 43-120 (270)
255 3mng_A Peroxiredoxin-5, mitoch 96.8 0.00095 3.2E-08 54.3 4.3 59 37-100 42-109 (173)
256 3qpm_A Peroxiredoxin; oxidored 96.8 0.0014 4.8E-08 55.9 5.4 53 37-93 76-132 (240)
257 2r2j_A Thioredoxin domain-cont 96.8 0.0065 2.2E-07 54.8 10.2 77 21-104 219-301 (382)
258 3msz_A Glutaredoxin 1; alpha-b 96.8 0.0016 5.3E-08 45.8 4.7 57 41-102 5-67 (89)
259 3hz8_A Thiol:disulfide interch 96.8 0.00084 2.9E-08 55.2 3.6 39 37-79 23-65 (193)
260 2lqo_A Putative glutaredoxin R 96.7 0.0037 1.3E-07 45.8 6.5 54 42-102 6-61 (92)
261 3ic4_A Glutaredoxin (GRX-1); s 96.7 0.00097 3.3E-08 47.6 3.0 55 42-102 14-73 (92)
262 1prx_A HORF6; peroxiredoxin, h 96.7 0.0015 5.1E-08 55.2 4.6 37 40-79 34-74 (224)
263 3a2v_A Probable peroxiredoxin; 96.5 0.0011 3.7E-08 57.3 2.8 45 32-79 27-76 (249)
264 3nzn_A Glutaredoxin; structura 96.5 0.0031 1.1E-07 46.4 4.9 59 38-102 20-83 (103)
265 1wik_A Thioredoxin-like protei 96.5 0.0056 1.9E-07 45.5 6.1 67 28-101 5-75 (109)
266 4hde_A SCO1/SENC family lipopr 96.5 0.0058 2E-07 48.9 6.6 73 37-111 31-113 (170)
267 2v2g_A Peroxiredoxin 6; oxidor 96.3 0.0022 7.5E-08 54.7 3.3 57 39-100 30-99 (233)
268 2h8l_A Protein disulfide-isome 96.3 0.026 8.8E-07 47.9 10.0 75 21-104 114-202 (252)
269 1xcc_A 1-Cys peroxiredoxin; un 96.1 0.0024 8.2E-08 53.8 2.7 37 40-79 34-74 (220)
270 3l9v_A Putative thiol-disulfid 96.1 0.0016 5.5E-08 53.3 1.3 38 38-79 14-58 (189)
271 3l4n_A Monothiol glutaredoxin- 96.1 0.0046 1.6E-07 48.0 3.8 68 29-102 5-76 (127)
272 3q6o_A Sulfhydryl oxidase 1; p 95.9 0.04 1.4E-06 46.1 9.4 71 23-104 140-213 (244)
273 3feu_A Putative lipoprotein; a 95.9 0.0028 9.7E-08 51.7 1.9 36 38-79 22-61 (185)
274 2ec4_A FAS-associated factor 1 95.6 0.042 1.4E-06 44.9 7.9 71 27-104 36-138 (178)
275 2znm_A Thiol:disulfide interch 95.5 0.02 6.7E-07 46.2 5.7 38 37-78 21-62 (195)
276 3keb_A Probable thiol peroxida 95.5 0.014 4.9E-07 49.6 4.8 58 37-101 47-112 (224)
277 4f82_A Thioredoxin reductase; 95.3 0.014 4.8E-07 47.9 4.0 67 30-101 40-114 (176)
278 3ed3_A Protein disulfide-isome 95.0 0.29 9.9E-06 42.6 12.0 104 19-134 141-276 (298)
279 1t1v_A SH3BGRL3, SH3 domain-bi 94.4 0.067 2.3E-06 38.3 5.3 54 42-102 4-66 (93)
280 3gv1_A Disulfide interchange p 94.3 0.081 2.8E-06 41.7 6.0 19 36-56 12-30 (147)
281 1z6m_A Conserved hypothetical 94.3 0.031 1.1E-06 44.2 3.6 40 37-78 26-69 (175)
282 2ct6_A SH3 domain-binding glut 93.9 0.11 3.7E-06 38.7 5.8 55 41-102 9-78 (111)
283 2rem_A Disulfide oxidoreductas 93.9 0.05 1.7E-06 43.6 4.1 38 37-78 24-65 (193)
284 3t58_A Sulfhydryl oxidase 1; o 93.9 0.14 4.8E-06 48.5 7.8 72 22-104 139-213 (519)
285 3sbc_A Peroxiredoxin TSA1; alp 93.8 0.053 1.8E-06 45.8 4.3 40 37-79 51-95 (216)
286 2wci_A Glutaredoxin-4; redox-a 93.0 0.086 3E-06 41.1 3.9 65 29-101 26-95 (135)
287 3l9s_A Thiol:disulfide interch 92.8 0.042 1.5E-06 44.9 2.1 38 38-79 21-65 (191)
288 4eo3_A Bacterioferritin comigr 92.4 0.098 3.4E-06 46.4 4.0 59 37-100 23-82 (322)
289 2xhf_A Peroxiredoxin 5; oxidor 92.3 0.12 4.1E-06 41.9 4.2 61 37-101 41-108 (171)
290 3gx8_A Monothiol glutaredoxin- 92.3 0.22 7.5E-06 37.7 5.4 69 30-102 8-80 (121)
291 3tue_A Tryparedoxin peroxidase 92.3 0.16 5.5E-06 42.9 5.0 40 37-79 55-99 (219)
292 3ipz_A Monothiol glutaredoxin- 92.1 0.17 5.9E-06 37.4 4.5 65 30-101 10-78 (109)
293 3zyw_A Glutaredoxin-3; metal b 92.1 0.19 6.3E-06 37.5 4.7 66 30-102 8-77 (111)
294 3ec3_A Protein disulfide-isome 92.0 0.64 2.2E-05 39.1 8.5 74 20-103 115-200 (250)
295 1nm3_A Protein HI0572; hybrid, 91.8 0.2 6.7E-06 41.8 5.0 55 39-101 169-224 (241)
296 2wem_A Glutaredoxin-related pr 90.6 0.25 8.6E-06 37.4 4.1 66 29-101 11-81 (118)
297 1xiy_A Peroxiredoxin, pfaop; a 89.5 0.41 1.4E-05 39.0 4.8 61 37-101 42-110 (182)
298 1aba_A Glutaredoxin; electron 89.3 0.37 1.3E-05 33.6 3.9 55 42-102 2-70 (87)
299 4dvc_A Thiol:disulfide interch 88.3 0.43 1.5E-05 37.3 4.0 38 37-78 20-61 (184)
300 1u6t_A SH3 domain-binding glut 88.0 0.63 2.2E-05 35.6 4.6 68 41-111 1-83 (121)
301 3c7m_A Thiol:disulfide interch 86.7 0.52 1.8E-05 37.4 3.7 37 38-78 17-58 (195)
302 2jad_A Yellow fluorescent prot 85.8 0.52 1.8E-05 42.7 3.6 67 31-101 254-323 (362)
303 3gha_A Disulfide bond formatio 83.7 0.96 3.3E-05 36.9 4.0 41 37-79 28-73 (202)
304 2x8g_A Thioredoxin glutathione 81.6 0.93 3.2E-05 42.9 3.6 65 29-101 9-76 (598)
305 3bci_A Disulfide bond protein 77.1 2.7 9.1E-05 33.2 4.5 40 37-78 10-54 (186)
306 3f4s_A Alpha-DSBA1, putative u 75.7 2.4 8.1E-05 35.4 3.9 40 37-78 38-82 (226)
307 2wul_A Glutaredoxin related pr 71.1 5.7 0.0002 30.0 4.7 67 28-101 10-81 (118)
308 3gn3_A Putative protein-disulf 66.1 3.7 0.00013 32.9 2.9 39 36-77 12-54 (182)
309 3gmf_A Protein-disulfide isome 64.7 5.7 0.0002 32.5 3.9 40 37-78 14-58 (205)
310 2g2q_A Glutaredoxin-2; thiored 49.7 18 0.0006 27.6 3.9 37 39-79 2-38 (124)
311 2yru_A Steroid receptor RNA ac 48.6 23 0.00079 26.7 4.5 37 195-231 16-52 (118)
312 1t4y_A Adaptive-response senso 45.9 42 0.0014 24.9 5.4 43 57-104 31-75 (105)
313 3tdg_A DSBG, putative uncharac 44.9 9.2 0.00031 33.2 1.9 26 38-65 147-173 (273)
314 3vmx_A Voltage-gated hydrogen 43.2 40 0.0014 21.4 4.2 33 174-209 10-42 (48)
315 1uo4_A General control protein 39.7 34 0.0011 20.1 3.2 16 194-209 17-32 (34)
316 2bni_A General control protein 39.0 32 0.0011 20.2 3.0 16 194-209 17-32 (34)
317 2wq1_A General control protein 38.6 40 0.0014 19.6 3.4 16 194-209 16-31 (33)
318 3c3g_A Alpha/beta peptide with 37.0 42 0.0014 19.5 3.3 16 194-209 16-31 (33)
319 2r2v_A GCN4 leucine zipper; co 36.6 43 0.0015 19.6 3.3 16 194-209 17-32 (34)
320 3ktb_A Arsenical resistance op 36.2 72 0.0024 23.6 5.4 44 56-102 27-81 (106)
321 3kzq_A Putative uncharacterize 35.5 24 0.00081 28.1 3.0 30 41-74 4-37 (208)
322 3c3f_A Alpha/beta peptide with 34.2 49 0.0017 19.3 3.3 16 194-209 17-32 (34)
323 3m48_A General control protein 32.3 52 0.0018 19.1 3.2 16 194-209 16-31 (33)
324 3kgk_A Arsenical resistance op 29.2 34 0.0011 25.6 2.6 53 56-111 24-96 (110)
325 1kd8_A GABH AIV, GCN4 acid bas 28.2 70 0.0024 18.9 3.3 16 194-209 17-32 (36)
326 2oxj_A Hybrid alpha/beta pepti 28.1 75 0.0026 18.6 3.4 16 194-209 17-32 (34)
327 2kok_A Arsenate reductase; bru 27.5 43 0.0015 24.5 3.0 32 42-79 7-38 (120)
328 2hy6_A General control protein 26.8 78 0.0027 18.5 3.3 16 194-209 17-32 (34)
329 1kd8_B GABH BLL, GCN4 acid bas 25.0 87 0.003 18.5 3.3 16 194-209 17-32 (36)
330 2ijr_A Hypothetical protein AP 22.7 66 0.0023 28.0 3.5 44 37-82 218-269 (300)
331 2xze_Q Charged multivesicular 22.4 34 0.0012 20.9 1.2 13 217-229 28-40 (40)
332 3kzq_A Putative uncharacterize 21.8 68 0.0023 25.3 3.4 19 86-104 158-177 (208)
333 2in3_A Hypothetical protein; D 20.6 50 0.0017 26.0 2.3 32 40-75 8-43 (216)
No 1
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=100.00 E-value=9.6e-46 Score=324.50 Aligned_cols=212 Identities=33% Similarity=0.576 Sum_probs=184.0
Q ss_pred cCCCceEcChhhHHHHhccCCeEEEEEE--ecCCCCCCcHHHHHHHHHccC-CCCcEEEEEecccCCCcccHHHHhhcCc
Q psy3889 19 LSKGHVSLDTHNFDKILSKFHTTLVKFD--IAYPYGAKHEAFLEVAESSKH-QPDFLVAEVGVKDYGERDNEDLAKRGCL 95 (243)
Q Consensus 19 ~~~~v~~L~~~nF~~~v~~~k~vlV~Fy--A~~pWC~~cp~~~~lA~~~~~-~~~v~vakVd~~d~~~~~n~~l~~~~~V 95 (243)
..+.++.||+.||+++++++++|||+|| | |||+..|+|+++|+.+++ .++|.|++|||++|++..|+++|++|+|
T Consensus 14 ~~~~v~~Lt~~nF~~vi~~~~~vlV~Fy~~A--pWCgl~P~~e~lA~~~~~~~~~v~~akVD~d~~g~~~n~~la~~~~V 91 (248)
T 2c0g_A 14 TCTGCVDLDELSFEKTVERFPYSVVKFDIAS--PYGEKHEAFTAFSKSAHKATKDLLIATVGVKDYGELENKALGDRYKV 91 (248)
T ss_dssp -CTTCEECCTTTHHHHHTTSSEEEEEEEESS--CCSHHHHHHHHHHHHHHHHCSSEEEEEEEECSSTTCTTHHHHHHTTC
T ss_pred CCCCcEECCHHHHHHHHhcCCCEEEEEECCC--CCCccHHHHHHHHHHHhccCCCeEEEEEECCcccccccHHHHHHhCC
Confidence 4567999999999998888899999999 8 999966999999999965 5789999999985554458999999999
Q ss_pred c---CceEEEec---------------cchHhhhhhhHHHHhhhhcccccCcCccchhhHHHHHHHHhhcHHHHHHHHHH
Q psy3889 96 T---PQLLWAFC---------------VADSLNKTLFILIIFFSSIGIWIGAVGCLQDFDRLAKDFIRSASQERKTLLKS 157 (243)
Q Consensus 96 ~---~PTi~lF~---------------~~~~l~~~~f~~~~i~~~~g~~~~~~G~i~~~d~l~~~f~~~~~~~~~~~l~~ 157 (243)
+ ||||++|+ +.++|.+ | |++++|++.+.+||++++|.++.+|++++.+.+.+++++
T Consensus 92 ~~~~~PTl~~F~G~~~~~~~y~~~G~~~~~~L~~--f----i~~~~~~~~~~~g~i~~~d~l~~~f~~~~~~~~~~~~~~ 165 (248)
T 2c0g_A 92 DDKNFPSIFLFKGNADEYVQLPSHVDVTLDNLKA--F----VSANTPLYIGRDGCIKEFNEVLKNYANIPDAEQLKLIEK 165 (248)
T ss_dssp CTTSCCEEEEESSSSSSEEECCTTSCCCHHHHHH--H----HHHHSSCCCCCTTCCHHHHHHHTTGGGSCHHHHHHHHHH
T ss_pred CcCCCCeEEEEeCCcCcceeecccCCCCHHHHHH--H----HHHhhccccCCCCchHHHHHHHHHHhcccchhHHHHHHH
Confidence 9 99999996 2235666 7 888899999999999999999999998776778999999
Q ss_pred HHHHHHHhhhhhhhhhHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHHHhcccCChhhHHHHHHHhhHHHHhhhcccC-
Q psy3889 158 AEDLWDEIKTNSARKSAEFYVKTMRKLVEISGEGSESEFLTREKARLKGLLNQKVSAQKKDELKSRMNILDSFALYVKS- 236 (243)
Q Consensus 158 ~~~~~~~~~~~~~~~~a~~Y~kvm~ki~~~~~~~~g~~~i~~E~~RL~~~l~~~~~~~k~d~~~~r~NIL~~F~~~~~~- 236 (243)
++++++.+.++.+.++++||+++|+||+++ |++|+++|++||++||+|+++++|+|+|++|+|||++|..+..+
T Consensus 166 ~~~~~~~l~~~~~~~~a~~Y~kvm~ki~~~-----g~~~~~~E~~Rl~~~l~~~~~~~k~d~~~~r~NIL~~F~~~~~~~ 240 (248)
T 2c0g_A 166 LQAKQEQLTDPEQQQNARAYLIYMRKIHEV-----GYDFLEEETKRLLRLKAGKVTEAKKEELLRKLNILEVFRVHKVTK 240 (248)
T ss_dssp HHHHHHHCCSHHHHHHHHHHHHHHHHHHHH-----CTHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHTCCSSCCS
T ss_pred HHHHHHHcccchhhHHHHHHHHHHHHHHhh-----hhHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhccCcc
Confidence 999999987655679999999999999999 99999999999999998899999999999999999999887766
Q ss_pred -CCCCCCC
Q psy3889 237 -SGGRDEL 243 (243)
Q Consensus 237 -~~~~~el 243 (243)
.-+||||
T Consensus 241 ~~~~~~~~ 248 (248)
T 2c0g_A 241 TAPEKEEL 248 (248)
T ss_dssp CC------
T ss_pred cccccccC
Confidence 4488887
No 2
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=100.00 E-value=6.1e-44 Score=311.68 Aligned_cols=203 Identities=35% Similarity=0.613 Sum_probs=178.8
Q ss_pred cCCCceEcChhhHHHHhccCCeEEEEEEecCCCCCCcHHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhcCcc--
Q psy3889 19 LSKGHVSLDTHNFDKILSKFHTTLVKFDIAYPYGAKHEAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRGCLT-- 96 (243)
Q Consensus 19 ~~~~v~~L~~~nF~~~v~~~k~vlV~FyA~~pWC~~cp~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~~V~-- 96 (243)
++++|++|++.||+++++++++|||.|||++|||+..|.|+++|..+++.+++.|++|||++++...++++|++|+|+
T Consensus 3 ~~~~v~~Lt~~nF~~~i~~~~~vlV~FyA~~pWCgl~P~~e~lA~~~~~~~~v~~akVDvd~~g~~~~~~l~~~~~V~~~ 82 (240)
T 2qc7_A 3 HTKGALPLDTVTFYKVIPKSKFVLVKFDTQYPYGEKQDEFKRLAENSASSDDLLVAEVGISDYGDKLNMELSEKYKLDKE 82 (240)
T ss_dssp CCTTCEECCTTHHHHHGGGCSEEEEEECCSSCCSHHHHHHHHHHHHHTTCTTEEEEEECCCCSSSCCSHHHHHHTTCCGG
T ss_pred CCCCceECCHHHHHHHHcCCCCEEEEEeCCCCCCcchHHHHHHHHHhcCCCCeEEEEEeCCcccchhhHHHHHHcCCCCC
Confidence 456799999999999998889999999999999996699999999997667899999997643333689999999999
Q ss_pred -CceEEEec--------------cchHhhhhhhHHHHhhhhcccccCcCccchhhHHHHHHHHhhc-HHHHHHHHHHHHH
Q psy3889 97 -PQLLWAFC--------------VADSLNKTLFILIIFFSSIGIWIGAVGCLQDFDRLAKDFIRSA-SQERKTLLKSAED 160 (243)
Q Consensus 97 -~PTi~lF~--------------~~~~l~~~~f~~~~i~~~~g~~~~~~G~i~~~d~l~~~f~~~~-~~~~~~~l~~~~~ 160 (243)
|||+++|+ +.++|++ | |++++ .+.+.+|+++.+|.++.+|+.++ .+.|.++++++++
T Consensus 83 ~~PTl~~f~~G~~~~~~~y~G~~~~~~L~~--f----i~~~~-~~~~~~g~i~~~d~l~~~f~~~~~~~~~~~~~~~~~~ 155 (240)
T 2qc7_A 83 SYPVFYLFRDGDFENPVPYTGAVKVGAIQR--W----LKGQG-VYLGMPGCLPVYDALAGEFIRASGVEARQALLKQGQD 155 (240)
T ss_dssp GCSEEEEEETTCSSCCEECCSCSCHHHHHH--H----HHHTT-CCCCCTTCCHHHHHHHHHHHHSCSHHHHHHHTTHHHH
T ss_pred CCCEEEEEeCCCcCcceeecCCCCHHHHHH--H----HHHhc-cccCCCCchHHHHHHHHHHHhccchhHHHHHHHHHHH
Confidence 99999997 4557888 8 77776 57789999999999999999875 4678999999999
Q ss_pred HHHHhhhhhhhhhHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHHHh-cccCChhhHHHHHHHhhHHHHhhhcc
Q psy3889 161 LWDEIKTNSARKSAEFYVKTMRKLVEISGEGSESEFLTREKARLKGLL-NQKVSAQKKDELKSRMNILDSFALYV 234 (243)
Q Consensus 161 ~~~~~~~~~~~~~a~~Y~kvm~ki~~~~~~~~g~~~i~~E~~RL~~~l-~~~~~~~k~d~~~~r~NIL~~F~~~~ 234 (243)
+++++ ++.+.++++||+++|+||+++ |++|+++|++||++|| +|+|+++|+|+|++|+|||++|.+..
T Consensus 156 ~~~~~-~~~~~~~a~~Y~kvm~ki~~~-----g~~~~~~E~~Rl~~~l~~~~~~~~k~d~~~~r~NIL~~F~~~~ 224 (240)
T 2qc7_A 156 NLSSV-KETQKKWAEQYLKIMGKILDQ-----GEDFPASEMTRIARLIEKNKMSDGKKEELQKSLNILTAFQKKG 224 (240)
T ss_dssp HTTCS-CHHHHHHHHHHHHHHHHHHHS-----CTTSHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHTTSSCSC
T ss_pred HHhhc-chhhhHHHHHHHHHHHHHHhc-----ccHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcc
Confidence 87764 334568999999999999999 9999999999999999 59999999999999999999998754
No 3
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=99.77 E-value=1.2e-18 Score=134.98 Aligned_cols=82 Identities=16% Similarity=0.263 Sum_probs=73.1
Q ss_pred cCCCceEcChhhHHHHh-ccCCeEEEEEEecCCCCCCc----HHHHHHHHHcc---CCCCcEEEEEecccCCCcccHHHH
Q psy3889 19 LSKGHVSLDTHNFDKIL-SKFHTTLVKFDIAYPYGAKH----EAFLEVAESSK---HQPDFLVAEVGVKDYGERDNEDLA 90 (243)
Q Consensus 19 ~~~~v~~L~~~nF~~~v-~~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~---~~~~v~vakVd~~d~~~~~n~~l~ 90 (243)
..+.+++|++++|++.+ +++++++|.||| |||+|| |.|+++|+.+. ..+++.+++|||+ +++++|
T Consensus 13 ~~~~v~~l~~~~f~~~~~~~~~~vlv~F~a--~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~-----~~~~l~ 85 (127)
T 3h79_A 13 RPSRVVELTDETFDSIVMDPEKDVFVLYYV--PWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGE-----KYPDVI 85 (127)
T ss_dssp CCCCCEECCTTTHHHHHTCTTCEEEEEEEC--TTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETT-----TCHHHH
T ss_pred CCCceEECChhhHHHHHhCCCCCEEEEEEC--CccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEcc-----ccHhHH
Confidence 45679999999999998 578999999999 999999 99999998874 2457999999998 789999
Q ss_pred hhcCcc-CceEEEeccch
Q psy3889 91 KRGCLT-PQLLWAFCVAD 107 (243)
Q Consensus 91 ~~~~V~-~PTi~lF~~~~ 107 (243)
++|+|+ +||+++|++..
T Consensus 86 ~~~~v~~~Pt~~~~~~g~ 103 (127)
T 3h79_A 86 ERMRVSGFPTMRYYTRID 103 (127)
T ss_dssp HHTTCCSSSEEEEECSSC
T ss_pred HhcCCccCCEEEEEeCCC
Confidence 999999 99999998443
No 4
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=99.73 E-value=7.6e-18 Score=128.20 Aligned_cols=78 Identities=18% Similarity=0.276 Sum_probs=66.7
Q ss_pred eEc-ChhhHHHHh--ccCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhcCcc
Q psy3889 24 VSL-DTHNFDKIL--SKFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRGCLT 96 (243)
Q Consensus 24 ~~L-~~~nF~~~v--~~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~~V~ 96 (243)
.++ |.++|++.+ .++++|+|.||| |||+|| |.|+++++.+. ++.+++||++ ++++++++|+|+
T Consensus 3 ~~i~~~~~f~~~l~~~~~k~vvv~F~a--~wC~~C~~~~p~~~~~~~~~~---~~~~~~vd~d-----~~~~l~~~~~V~ 72 (105)
T 3zzx_A 3 YQVKDQEDFTKQLNEAGNKLVVIDFYA--TWCGPCKMIAPKLEELSQSMS---DVVFLKVDVD-----ECEDIAQDNQIA 72 (105)
T ss_dssp EECCSHHHHHHHHHHTTTSEEEEEEEC--TTCHHHHHHHHHHHHHHHHCT---TEEEEEEETT-----TCHHHHHHTTCC
T ss_pred EEeCCHHHHHHHHHhcCCCEEEEEEEC--CCCCCccCCCcchhhhhhccC---CeEEEEEecc-----cCHHHHHHcCCC
Confidence 444 468999988 347899999999 999999 99999998874 6999999998 899999999999
Q ss_pred -CceEEEeccchHhhh
Q psy3889 97 -PQLLWAFCVADSLNK 111 (243)
Q Consensus 97 -~PTi~lF~~~~~l~~ 111 (243)
+||+++|++++.+-.
T Consensus 73 ~~PT~~~~~~G~~v~~ 88 (105)
T 3zzx_A 73 CMPTFLFMKNGQKLDS 88 (105)
T ss_dssp BSSEEEEEETTEEEEE
T ss_pred eecEEEEEECCEEEEE
Confidence 999999986554444
No 5
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.73 E-value=7.2e-17 Score=141.17 Aligned_cols=78 Identities=14% Similarity=0.189 Sum_probs=70.3
Q ss_pred hcCCCceEcChhhHHHHhc--cCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHh
Q psy3889 18 VLSKGHVSLDTHNFDKILS--KFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAK 91 (243)
Q Consensus 18 ~~~~~v~~L~~~nF~~~v~--~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~ 91 (243)
...+.|+++|++||++++. ++++|+|.||+ |||+|| |.|+++++.+.+ ++.|++||++ +++++++
T Consensus 4 ~~~~~v~~~~~~~f~~~~~~~~~~~v~v~f~a--~wC~~C~~~~p~~~~~~~~~~~--~~~~~~vd~~-----~~~~~~~ 74 (287)
T 3qou_A 4 MSVENIVNINESNLQQVLEQSMTTPVLFYFWS--ERSQHCLQLTPILESLAAQYNG--QFILAKLDCD-----AEQMIAA 74 (287)
T ss_dssp --CTTEEECCTTTHHHHHTTTTTSCEEEEEEC--TTCTTTTTTHHHHHHHHHHHTS--SSEEEEEETT-----TCHHHHH
T ss_pred CCCCccEECCHHHHHHHHHhcCCCeEEEEEEC--CCChHHHHHHHHHHHHHHHcCC--CeEEEEEeCc-----cCHHHHH
Confidence 3456799999999999884 38999999999 999999 999999999864 6999999998 7899999
Q ss_pred hcCcc-CceEEEec
Q psy3889 92 RGCLT-PQLLWAFC 104 (243)
Q Consensus 92 ~~~V~-~PTi~lF~ 104 (243)
+|+|+ +||+++|+
T Consensus 75 ~~~v~~~Pt~~~~~ 88 (287)
T 3qou_A 75 QFGLRAIPTVYLFQ 88 (287)
T ss_dssp TTTCCSSSEEEEEE
T ss_pred HcCCCCCCeEEEEE
Confidence 99999 99999997
No 6
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=99.70 E-value=2.1e-17 Score=132.79 Aligned_cols=81 Identities=12% Similarity=0.054 Sum_probs=73.1
Q ss_pred CceEcChhhHHHHhccCCeEEEEEEecCCC--CCCc----HHHHHHHHHccCCCC-cEEEEEecccCCCcccHHHHhhcC
Q psy3889 22 GHVSLDTHNFDKILSKFHTTLVKFDIAYPY--GAKH----EAFLEVAESSKHQPD-FLVAEVGVKDYGERDNEDLAKRGC 94 (243)
Q Consensus 22 ~v~~L~~~nF~~~v~~~k~vlV~FyA~~pW--C~~c----p~~~~lA~~~~~~~~-v~vakVd~~d~~~~~n~~l~~~~~ 94 (243)
++..+|++||++.|.++++|||.||| +| ||+| |+++++|++|.+ + +.|++||+| +|++++.+|+
T Consensus 18 g~~~~t~~~F~~~v~~~~~vlVdF~a--~~crCgpCk~iaPvleela~e~~g--~~v~~~KVdvD-----e~~~lA~~yg 88 (140)
T 2qgv_A 18 GWTPVSESRLDDWLTQAPDGVVLLSS--DPKRTPEVSDNPVMIGELLHEFPD--YTWQVAIADLE-----QSEAIGDRFG 88 (140)
T ss_dssp TCEECCHHHHHHHHHTCSSEEEEECC--CTTTCTTTTHHHHHHHHHHTTCTT--SCCEEEECCHH-----HHHHHHHHHT
T ss_pred CCccCCHHHHHHHHhCCCCEEEEEeC--CcccCCcHHHHHhHHHHHHHHcCC--CeEEEEEEECC-----CCHHHHHHcC
Confidence 88999999999999777899999999 88 9999 999999999854 6 999999998 8999999999
Q ss_pred cc-CceEEEeccchHhhh
Q psy3889 95 LT-PQLLWAFCVADSLNK 111 (243)
Q Consensus 95 V~-~PTi~lF~~~~~l~~ 111 (243)
|+ +||+++|++++.+-+
T Consensus 89 V~sIPTlilFk~G~~v~~ 106 (140)
T 2qgv_A 89 AFRFPATLVFTGGNYRGV 106 (140)
T ss_dssp CCSSSEEEEEETTEEEEE
T ss_pred CccCCEEEEEECCEEEEE
Confidence 99 999999996655444
No 7
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=99.70 E-value=4e-17 Score=149.13 Aligned_cols=92 Identities=15% Similarity=0.257 Sum_probs=81.2
Q ss_pred cCCCceEcChhhHHHHhccCCeEEEEEEecCCCCCCc---H-------HHHHHHHHccCCCCcEEEEEecccCCCcccHH
Q psy3889 19 LSKGHVSLDTHNFDKILSKFHTTLVKFDIAYPYGAKH---E-------AFLEVAESSKHQPDFLVAEVGVKDYGERDNED 88 (243)
Q Consensus 19 ~~~~v~~L~~~nF~~~v~~~k~vlV~FyA~~pWC~~c---p-------~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~ 88 (243)
..++|++||..||+++|.++++|||.||| |||+|| | .|+++|..+.+ .++.+++|||+ .+++
T Consensus 11 ~~~~v~~lt~~~f~~~i~~~~~vlV~FyA--pWC~~~~~~~~l~~~~p~~e~~a~~~~~-~~v~~~~Vd~~-----~~~~ 82 (367)
T 3us3_A 11 GVDRVINVNAKNYKNVFKKYEVLALLYHE--PPEDDKASQRQFEMEELILELAAQVLED-KGVGFGLVDSE-----KDAA 82 (367)
T ss_dssp CCCCCEECCTTTHHHHHHHCSEEEEEEEC--CCCSSHHHHHHHHHHHHHHHHHHHHHTT-TTEEEEEEETT-----TTHH
T ss_pred CCCccEECCHHHHHHHHhhCCeEEEEEEC--CCchhHHHhhhhccccHHHHHHHHHhhc-CCceEEEEeCc-----ccHH
Confidence 34579999999999999888999999999 999997 5 79999998863 46999999998 7899
Q ss_pred HHhhcCcc-CceEEEec-----------cchHhhhhhhHHHHhhhhcc
Q psy3889 89 LAKRGCLT-PQLLWAFC-----------VADSLNKTLFILIIFFSSIG 124 (243)
Q Consensus 89 l~~~~~V~-~PTi~lF~-----------~~~~l~~~~f~~~~i~~~~g 124 (243)
+|++|+|+ |||+++|+ +.++|++ | +.++.+
T Consensus 83 l~~~~~V~~~PTl~~f~~G~~~~y~G~~~~~~i~~--~----i~~~~~ 124 (367)
T 3us3_A 83 VAKKLGLTEEDSIYVFKEDEVIEYDGEFSADTLVE--F----LLDVLE 124 (367)
T ss_dssp HHHHHTCCSTTEEEEEETTEEEECCSCCSHHHHHH--H----HHHHHS
T ss_pred HHHHcCCCcCceEEEEECCcEEEeCCCCCHHHHHH--H----HHHhcC
Confidence 99999999 99999997 6788999 9 666554
No 8
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=99.70 E-value=4.2e-17 Score=130.55 Aligned_cols=84 Identities=13% Similarity=0.076 Sum_probs=72.0
Q ss_pred cCCCceEcChhhHHHHhccCC-eEEEEEEecCCCC--CCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHh
Q psy3889 19 LSKGHVSLDTHNFDKILSKFH-TTLVKFDIAYPYG--AKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAK 91 (243)
Q Consensus 19 ~~~~v~~L~~~nF~~~v~~~k-~vlV~FyA~~pWC--~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~ 91 (243)
...+...+|++||++.|.+.+ +|||+||| +|| ++| |+++++++++.+ ++.|++||+| +|++++.
T Consensus 13 ~~~g~~~vt~~~F~~~v~~~~~~vlVdF~A--~wCr~gpCk~iaPvleela~e~~~--~v~~~KVdvD-----e~~~la~ 83 (137)
T 2qsi_A 13 RPNAPTLVDEATVDDFIAHSGKIVVLFFRG--DAVRFPEAADLAVVLPELINAFPG--RLVAAEVAAE-----AERGLMA 83 (137)
T ss_dssp ----CEEECTTTHHHHHHTSSSEEEEEECC--CTTTCTTHHHHHHHHHHHHHTSTT--TEEEEEECGG-----GHHHHHH
T ss_pred HhcCCcccCHhHHHHHHhcCCCcEEEEEeC--CccCCCchhhHHhHHHHHHHHccC--CcEEEEEECC-----CCHHHHH
Confidence 345778999999999985444 99999999 999 999 999999999854 8999999998 8999999
Q ss_pred hcCcc-CceEEEeccchHhhh
Q psy3889 92 RGCLT-PQLLWAFCVADSLNK 111 (243)
Q Consensus 92 ~~~V~-~PTi~lF~~~~~l~~ 111 (243)
+|+|+ +||+++|++++.+-+
T Consensus 84 ~ygV~siPTlilFkdG~~v~~ 104 (137)
T 2qsi_A 84 RFGVAVCPSLAVVQPERTLGV 104 (137)
T ss_dssp HHTCCSSSEEEEEECCEEEEE
T ss_pred HcCCccCCEEEEEECCEEEEE
Confidence 99999 999999996665554
No 9
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=99.69 E-value=6.2e-17 Score=134.95 Aligned_cols=84 Identities=15% Similarity=0.092 Sum_probs=72.2
Q ss_pred cCCCceEcChhhHHHHhcc--CCeEEEEEEec-----CCCCCCc----HHHHHHHHHccCC---CCcEEEEEecccCCCc
Q psy3889 19 LSKGHVSLDTHNFDKILSK--FHTTLVKFDIA-----YPYGAKH----EAFLEVAESSKHQ---PDFLVAEVGVKDYGER 84 (243)
Q Consensus 19 ~~~~v~~L~~~nF~~~v~~--~k~vlV~FyA~-----~pWC~~c----p~~~~lA~~~~~~---~~v~vakVd~~d~~~~ 84 (243)
..+++++||++||+++|.+ +.+|||.|||. .+||++| |+|+++|+.+... +++.|++||++
T Consensus 16 ~~~~vi~lt~~nF~~~v~~~~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~v~f~kvD~d----- 90 (178)
T 3ga4_A 16 DDTGVITVTADNYPLLSRGVPGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSLNLFFTVDVN----- 90 (178)
T ss_dssp CTTSEEECCTTTHHHHTTCCTTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEETT-----
T ss_pred ccCCCEECCHHHHHHHHcccCCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCCEEEEEEECc-----
Confidence 3568999999999999843 55899999983 2599999 9999999998521 47999999998
Q ss_pred ccHHHHhhcCcc-CceEEEeccch
Q psy3889 85 DNEDLAKRGCLT-PQLLWAFCVAD 107 (243)
Q Consensus 85 ~n~~l~~~~~V~-~PTi~lF~~~~ 107 (243)
++++++.+|+|+ +||+++|+++.
T Consensus 91 ~~~~la~~~~I~siPtl~~F~~g~ 114 (178)
T 3ga4_A 91 EVPQLVKDLKLQNVPHLVVYPPAE 114 (178)
T ss_dssp TCHHHHHHTTCCSSCEEEEECCCC
T ss_pred cCHHHHHHcCCCCCCEEEEEcCCC
Confidence 899999999999 99999999443
No 10
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=99.69 E-value=1.2e-16 Score=119.56 Aligned_cols=79 Identities=19% Similarity=0.187 Sum_probs=71.4
Q ss_pred CCceEcChhhHHHHh-ccCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhcCc
Q psy3889 21 KGHVSLDTHNFDKIL-SKFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRGCL 95 (243)
Q Consensus 21 ~~v~~L~~~nF~~~v-~~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~~V 95 (243)
..++++++++|++.+ +++++++|.||+ |||++| |.|+++++.+.+ ++.++.||++ .+++++++|+|
T Consensus 4 ~~v~~l~~~~~~~~~~~~~~~vlv~f~a--~~C~~C~~~~~~~~~~~~~~~~--~v~~~~vd~~-----~~~~l~~~~~v 74 (111)
T 3gnj_A 4 MSLEKLDTNTFEQLIYDEGKACLVMFSR--KNCHVCQKVTPVLEELRLNYEE--SFGFYYVDVE-----EEKTLFQRFSL 74 (111)
T ss_dssp CCSEECCHHHHHHHHTTSCCCEEEEEEC--SSCHHHHHHHHHHHHHHHHTTT--TSEEEEEETT-----TCHHHHHHTTC
T ss_pred CcceecCHHHHHHHHHhcCCEEEEEEeC--CCChhHHHHHHHHHHHHHHcCC--ceEEEEEECC-----cChhHHHhcCC
Confidence 468999999999999 888999999999 999999 999999998853 6999999998 78999999999
Q ss_pred c-CceEEEeccchH
Q psy3889 96 T-PQLLWAFCVADS 108 (243)
Q Consensus 96 ~-~PTi~lF~~~~~ 108 (243)
+ +||+++|+++..
T Consensus 75 ~~~Pt~~~~~~g~~ 88 (111)
T 3gnj_A 75 KGVPQILYFKDGEY 88 (111)
T ss_dssp CSSCEEEEEETTEE
T ss_pred CcCCEEEEEECCEE
Confidence 9 999999974433
No 11
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=99.69 E-value=6.5e-17 Score=120.80 Aligned_cols=80 Identities=19% Similarity=0.283 Sum_probs=70.1
Q ss_pred cCCCceEcChhhHHHHhccCCeEEEEEEecCCCCCCc----HHHHHHHHHccCC-CCcEEEEEecccCCCcccHHHHhhc
Q psy3889 19 LSKGHVSLDTHNFDKILSKFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQ-PDFLVAEVGVKDYGERDNEDLAKRG 93 (243)
Q Consensus 19 ~~~~v~~L~~~nF~~~v~~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~-~~v~vakVd~~d~~~~~n~~l~~~~ 93 (243)
..+.++.|++++|++.+. +++++|.||+ |||++| |.|+++++.+... +++.++.||++ .+++++++|
T Consensus 3 ~~~~v~~l~~~~~~~~~~-~~~~lv~f~~--~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~-----~~~~l~~~~ 74 (111)
T 3uvt_A 3 LGSTVLALTENNFDDTIA-EGITFIKFYA--PWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCT-----AERNICSKY 74 (111)
T ss_dssp --CCSEECCTTTHHHHHH-SSEEEEEEEC--SSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETT-----TCHHHHHHT
T ss_pred CCCcceEcChhhHHHHhc-CCcEEEEEEC--CCChhHHHhhHHHHHHHHHhhccCCceEEEEEecc-----ccHhHHHhc
Confidence 346799999999999997 7799999999 999999 8999999887533 57999999997 789999999
Q ss_pred Ccc-CceEEEeccc
Q psy3889 94 CLT-PQLLWAFCVA 106 (243)
Q Consensus 94 ~V~-~PTi~lF~~~ 106 (243)
+|+ +||+++|++.
T Consensus 75 ~v~~~Pt~~~~~~g 88 (111)
T 3uvt_A 75 SVRGYPTLLLFRGG 88 (111)
T ss_dssp TCCSSSEEEEEETT
T ss_pred CCCcccEEEEEeCC
Confidence 999 9999999744
No 12
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.67 E-value=3.1e-16 Score=121.04 Aligned_cols=80 Identities=18% Similarity=0.204 Sum_probs=71.2
Q ss_pred CCCceEcChhhHHHHh-ccCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhcC
Q psy3889 20 SKGHVSLDTHNFDKIL-SKFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRGC 94 (243)
Q Consensus 20 ~~~v~~L~~~nF~~~v-~~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~~ 94 (243)
.+.+++|+.++|++.+ .++++++|.||+ |||++| |.|+++++.+.+ .+.++.||++ .+.+++++|+
T Consensus 16 ~~~v~~l~~~~f~~~~~~~~~~~lv~f~a--~wC~~C~~~~~~~~~~~~~~~~--~~~~~~vd~~-----~~~~l~~~~~ 86 (130)
T 2dml_A 16 SDDVIELTPSNFNREVIQSDGLWLVEFYA--PWCGHCQRLTPEWKKAATALKD--VVKVGAVNAD-----KHQSLGGQYG 86 (130)
T ss_dssp TSSSEECCTTTHHHHTTTCSSCEEEEEEC--TTCSTTGGGHHHHHHHHHHTTT--TSEEEEEETT-----TCHHHHHHHT
T ss_pred CCCcEECCHHHHHHHHhcCCCeEEEEEEC--CCCHHHHhhCHHHHHHHHHhcC--ceEEEEEeCC-----CCHHHHHHcC
Confidence 4569999999999966 778899999999 999999 999999998853 6999999997 7899999999
Q ss_pred cc-CceEEEeccchH
Q psy3889 95 LT-PQLLWAFCVADS 108 (243)
Q Consensus 95 V~-~PTi~lF~~~~~ 108 (243)
|+ +||+++|.+...
T Consensus 87 v~~~Pt~~~~~~~~~ 101 (130)
T 2dml_A 87 VQGFPTIKIFGANKN 101 (130)
T ss_dssp CCSSSEEEEESSCTT
T ss_pred CCccCEEEEEeCCCC
Confidence 99 999999984433
No 13
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.67 E-value=1.9e-16 Score=117.63 Aligned_cols=79 Identities=19% Similarity=0.243 Sum_probs=71.6
Q ss_pred CCCceEcChhhHHHHhccCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhcCc
Q psy3889 20 SKGHVSLDTHNFDKILSKFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRGCL 95 (243)
Q Consensus 20 ~~~v~~L~~~nF~~~v~~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~~V 95 (243)
.+.++.+++++|++.+.++++++|.||+ |||++| |.|+++++.+.+ ++.++.||++ .+++++++|+|
T Consensus 3 ~~~v~~l~~~~~~~~~~~~~~~lv~f~~--~~C~~C~~~~~~~~~~~~~~~~--~~~~~~v~~~-----~~~~~~~~~~i 73 (109)
T 3tco_A 3 EDVTLVLTEENFDEVIRNNKLVLVDCWA--EWCAPCHLYEPIYKKVAEKYKG--KAVFGRLNVD-----ENQKIADKYSV 73 (109)
T ss_dssp CCCCEECCTTTHHHHHHHSSEEEEEEEC--TTCHHHHHHHHHHHHHHHHTTT--TSEEEEEETT-----TCHHHHHHTTC
T ss_pred CCeEEEecHHHHHHHHhcCCeEEEEEEC--CCCHHHHhhhHHHHHHHHHhCC--CceEEEEccc-----cCHHHHHhcCc
Confidence 3568999999999999889999999999 999999 999999999854 7999999997 78999999999
Q ss_pred c-CceEEEeccch
Q psy3889 96 T-PQLLWAFCVAD 107 (243)
Q Consensus 96 ~-~PTi~lF~~~~ 107 (243)
. +||+++|+++.
T Consensus 74 ~~~Pt~~~~~~g~ 86 (109)
T 3tco_A 74 LNIPTTLIFVNGQ 86 (109)
T ss_dssp CSSSEEEEEETTE
T ss_pred ccCCEEEEEcCCc
Confidence 9 99999997443
No 14
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.67 E-value=1.6e-16 Score=122.74 Aligned_cols=80 Identities=21% Similarity=0.211 Sum_probs=71.4
Q ss_pred cCCCceEcChhhHHHHh-ccCCeEEEEEEecCCCCCCc----HHHHHHHHHcc--CCCCcEEEEEecccCCCcccHHHHh
Q psy3889 19 LSKGHVSLDTHNFDKIL-SKFHTTLVKFDIAYPYGAKH----EAFLEVAESSK--HQPDFLVAEVGVKDYGERDNEDLAK 91 (243)
Q Consensus 19 ~~~~v~~L~~~nF~~~v-~~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~--~~~~v~vakVd~~d~~~~~n~~l~~ 91 (243)
....++.|+.++|++.+ .++++++|.||+ |||++| |.|+++++.+. ..+++.++.||++ .++++++
T Consensus 5 ~~~~v~~l~~~~~~~~~~~~~~~~lv~f~a--~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~-----~~~~l~~ 77 (133)
T 1x5d_A 5 SSGDVIELTDDSFDKNVLDSEDVWMVEFYA--PWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDAT-----VNQVLAS 77 (133)
T ss_dssp SCCSCEECCTTHHHHHTTTSSSEEEEEEEC--TTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETT-----TCCHHHH
T ss_pred CCCcCEEcCHhhHHHHHhcCCCeEEEEEEC--CCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECC-----CCHHHHH
Confidence 45679999999999987 778999999999 999999 99999999985 1247999999997 7889999
Q ss_pred hcCcc-CceEEEecc
Q psy3889 92 RGCLT-PQLLWAFCV 105 (243)
Q Consensus 92 ~~~V~-~PTi~lF~~ 105 (243)
+|+|+ +||+++|..
T Consensus 78 ~~~v~~~Pt~~~~~~ 92 (133)
T 1x5d_A 78 RYGIRGFPTIKIFQK 92 (133)
T ss_dssp HHTCCSSSEEEEEET
T ss_pred hCCCCeeCeEEEEeC
Confidence 99999 999999974
No 15
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=99.66 E-value=7.1e-16 Score=115.81 Aligned_cols=80 Identities=15% Similarity=0.147 Sum_probs=70.7
Q ss_pred cCCCceEcChhhHHHHh-ccCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhc
Q psy3889 19 LSKGHVSLDTHNFDKIL-SKFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRG 93 (243)
Q Consensus 19 ~~~~v~~L~~~nF~~~v-~~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~ 93 (243)
..+++++++.++|++.+ .++++++|.||+ |||++| |.|+++++.+.+ ++.++.||++ .+++++++|
T Consensus 5 ~~~~v~~l~~~~~~~~~~~~~~~~lv~f~~--~~C~~C~~~~~~l~~~~~~~~~--~v~~~~v~~~-----~~~~~~~~~ 75 (115)
T 1thx_A 5 MSKGVITITDAEFESEVLKAEQPVLVYFWA--SWCGPCQLMSPLINLAANTYSD--RLKVVKLEID-----PNPTTVKKY 75 (115)
T ss_dssp -CCSEEECCGGGHHHHTTTCSSCEEEEEEC--TTCTTHHHHHHHHHHHHHHTTT--TCEEEEEEST-----TCHHHHHHT
T ss_pred ccCceEEeeccchhhHhhcCCceEEEEEEC--CCCHHHHHhHHHHHHHHHHhCC--cEEEEEEEcC-----CCHHHHHHc
Confidence 44579999999999876 788999999999 999999 999999998853 5999999997 789999999
Q ss_pred Ccc-CceEEEeccch
Q psy3889 94 CLT-PQLLWAFCVAD 107 (243)
Q Consensus 94 ~V~-~PTi~lF~~~~ 107 (243)
+|. +||+++|+++.
T Consensus 76 ~v~~~Pt~~~~~~G~ 90 (115)
T 1thx_A 76 KVEGVPALRLVKGEQ 90 (115)
T ss_dssp TCCSSSEEEEEETTE
T ss_pred CCCceeEEEEEcCCE
Confidence 999 99999997443
No 16
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=99.66 E-value=1.3e-16 Score=130.32 Aligned_cols=78 Identities=17% Similarity=0.211 Sum_probs=68.9
Q ss_pred ceEcC-hhhHHHHh--ccCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhcCc
Q psy3889 23 HVSLD-THNFDKIL--SKFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRGCL 95 (243)
Q Consensus 23 v~~L~-~~nF~~~v--~~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~~V 95 (243)
+..|+ ..+|++.| .++++|+|+||| +|||+| |+++++|+++.+ .+.|++||+| ++++++.+|+|
T Consensus 23 v~~l~t~~~f~~~v~~~~~k~VVVdF~A--~WCgPCk~m~PvleelA~e~~~--~v~f~kVDVD-----e~~e~a~~y~V 93 (160)
T 2av4_A 23 LQHLNSGWAVDQAIVNEDERLVCIRFGH--DYDPDCMKMDELLYKVADDIKN--FCVIYLVDIT-----EVPDFNTMYEL 93 (160)
T ss_dssp CEECCSHHHHHHHHHHCSSSEEEEEEEC--TTSHHHHHHHHHHHHHHHHHTT--TEEEEEEETT-----TCCTTTTTTTC
T ss_pred hhccCCHHHHHHHHHhcCCCEEEEEEEC--CCChhHHHHHHHHHHHHHHccC--CcEEEEEECC-----CCHHHHHHcCC
Confidence 45565 48999877 378899999999 999999 999999999853 6999999998 89999999999
Q ss_pred c-CceEEEeccchHh
Q psy3889 96 T-PQLLWAFCVADSL 109 (243)
Q Consensus 96 ~-~PTi~lF~~~~~l 109 (243)
. .||+++|++.+.+
T Consensus 94 ~siPT~~fFk~G~~v 108 (160)
T 2av4_A 94 YDPVSVMFFYRNKHM 108 (160)
T ss_dssp CSSEEEEEEETTEEE
T ss_pred CCCCEEEEEECCEEE
Confidence 9 9999999877665
No 17
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=99.66 E-value=5.3e-16 Score=121.54 Aligned_cols=77 Identities=16% Similarity=0.235 Sum_probs=68.2
Q ss_pred cCCCceEcChhhHHHHhc------------cCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCC
Q psy3889 19 LSKGHVSLDTHNFDKILS------------KFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYG 82 (243)
Q Consensus 19 ~~~~v~~L~~~nF~~~v~------------~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~ 82 (243)
....++.|+..+|+..+. ++++++|.||+ |||++| |.|+++++.+.+ ++.++.||++
T Consensus 20 ~~~~v~~l~~~~f~~~l~~~~~~~~~l~~~~~k~vlv~f~a--~wC~~C~~~~~~~~~~~~~~~~--~~~~~~v~~~--- 92 (141)
T 3hxs_A 20 PQSGTIHLTRAEFLKKIADYENHSKEWKYLGDKPAIVDFYA--DWCGPCKMVAPILEELSKEYAG--KIYIYKVNVD--- 92 (141)
T ss_dssp ---CCEECCHHHHHHHTCCCSSCCCCCCCCCSSCEEEEEEC--TTCTTHHHHHHHHHHHHHHTTT--TCEEEEEETT---
T ss_pred CCCCcccccHHHHHHHhhccccchhHHHHhCCCEEEEEEEC--CCCHHHHHHHHHHHHHHHHhcC--ceEEEEEECC---
Confidence 445799999999999883 47899999999 999999 999999999864 6999999997
Q ss_pred CcccHHHHhhcCcc-CceEEEec
Q psy3889 83 ERDNEDLAKRGCLT-PQLLWAFC 104 (243)
Q Consensus 83 ~~~n~~l~~~~~V~-~PTi~lF~ 104 (243)
.+++++++|+|. +||+++|.
T Consensus 93 --~~~~~~~~~~v~~~Pt~~~~~ 113 (141)
T 3hxs_A 93 --KEPELARDFGIQSIPTIWFVP 113 (141)
T ss_dssp --TCHHHHHHTTCCSSSEEEEEC
T ss_pred --CCHHHHHHcCCCCcCEEEEEe
Confidence 789999999999 99999995
No 18
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=99.65 E-value=1.4e-16 Score=145.92 Aligned_cols=86 Identities=26% Similarity=0.339 Sum_probs=74.3
Q ss_pred CCCceEcChhhHHHHhccCCeEEEEEEecCCCCCCc----HHHHHHHHHccC----CCCcEEEEEecccCCCcccHHHHh
Q psy3889 20 SKGHVSLDTHNFDKILSKFHTTLVKFDIAYPYGAKH----EAFLEVAESSKH----QPDFLVAEVGVKDYGERDNEDLAK 91 (243)
Q Consensus 20 ~~~v~~L~~~nF~~~v~~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~----~~~v~vakVd~~d~~~~~n~~l~~ 91 (243)
.+.|++|+++||++++.++++|+|.||| |||+|| |.|+++|+.++. ..++.+++|||+ .+.++|+
T Consensus 4 ~~~v~~l~~~~f~~~~~~~~~vlV~F~a--~wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~~-----~~~~l~~ 76 (382)
T 2r2j_A 4 GSEITSLDTENIDEILNNADVALVNFYA--DWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCD-----QHSDIAQ 76 (382)
T ss_dssp ----CBCCTTTHHHHHHHCSEEEEEEEC--TTCHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEETT-----TCHHHHH
T ss_pred CCceEECCHHHHHHHHhcCCeEEEEEEC--CCCHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEECC-----ccHHHHH
Confidence 4569999999999999888999999999 999999 999999999853 345999999998 7899999
Q ss_pred hcCcc-CceEEEec-------------cchHhhhhhh
Q psy3889 92 RGCLT-PQLLWAFC-------------VADSLNKTLF 114 (243)
Q Consensus 92 ~~~V~-~PTi~lF~-------------~~~~l~~~~f 114 (243)
+|+|+ |||+++|+ +.++|++ |
T Consensus 77 ~~~v~~~Pt~~~f~~G~~~~~~~~G~~~~~~l~~--~ 111 (382)
T 2r2j_A 77 RYRISKYPTLKLFRNGMMMKREYRGQRSVKALAD--Y 111 (382)
T ss_dssp HTTCCEESEEEEEETTEEEEEECCSCCSHHHHHH--H
T ss_pred hcCCCcCCEEEEEeCCcEeeeeecCcchHHHHHH--H
Confidence 99999 99999997 5677888 8
No 19
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=99.65 E-value=3.7e-16 Score=116.48 Aligned_cols=78 Identities=18% Similarity=0.200 Sum_probs=69.5
Q ss_pred CCceEcChhhHHHHh-ccCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhcCc
Q psy3889 21 KGHVSLDTHNFDKIL-SKFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRGCL 95 (243)
Q Consensus 21 ~~v~~L~~~nF~~~v-~~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~~V 95 (243)
..+++++.++|++.+ +++++++|.||+ |||++| |.|+++++.+.+ ++.++.||++ .+++++++|+|
T Consensus 2 ~~v~~l~~~~f~~~~~~~~~~~~v~f~~--~~C~~C~~~~~~l~~~~~~~~~--~~~~~~v~~~-----~~~~~~~~~~v 72 (108)
T 2trx_A 2 DKIIHLTDDSFDTDVLKADGAILVDFWA--EWCGPCKMIAPILDEIADEYQG--KLTVAKLNID-----QNPGTAPKYGI 72 (108)
T ss_dssp TTEEECCTTTHHHHTTTCSSEEEEEEEC--TTCHHHHHHHHHHHHHHHHTTT--TEEEEEEETT-----TCTTHHHHTTC
T ss_pred CcceecchhhHHHHHHhcCCeEEEEEEC--CCCHhHHHHHHHHHHHHHHhCC--CcEEEEEECC-----CCHHHHHHcCC
Confidence 468999999999766 778999999999 999999 999999998854 6999999997 78899999999
Q ss_pred c-CceEEEeccch
Q psy3889 96 T-PQLLWAFCVAD 107 (243)
Q Consensus 96 ~-~PTi~lF~~~~ 107 (243)
. +||+++|+++.
T Consensus 73 ~~~Pt~~~~~~G~ 85 (108)
T 2trx_A 73 RGIPTLLLFKNGE 85 (108)
T ss_dssp CSSSEEEEEETTE
T ss_pred cccCEEEEEeCCE
Confidence 9 99999997443
No 20
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=99.65 E-value=7.2e-16 Score=139.36 Aligned_cols=91 Identities=24% Similarity=0.313 Sum_probs=80.0
Q ss_pred cCCCceEcChhhHHHHhccCCeEEEEEEecCCCCCCc----HH-------HHHHHHHccCCCCcEEEEEecccCCCcccH
Q psy3889 19 LSKGHVSLDTHNFDKILSKFHTTLVKFDIAYPYGAKH----EA-------FLEVAESSKHQPDFLVAEVGVKDYGERDNE 87 (243)
Q Consensus 19 ~~~~v~~L~~~nF~~~v~~~k~vlV~FyA~~pWC~~c----p~-------~~~lA~~~~~~~~v~vakVd~~d~~~~~n~ 87 (243)
..+.|++|+++||++.+.++++++|.||| |||+ | |. |+++|+.+++. ++.+++|||+ .++
T Consensus 9 ~~~~v~~l~~~~f~~~i~~~~~~lV~F~a--~wC~-c~~~~p~~~~~~~~~~~~a~~~~~~-~v~~~~Vd~~-----~~~ 79 (350)
T 1sji_A 9 GKDRVVSLTEKNFKQVLKKYDVLCLYYHE--SVSS-DKVAQKQFQLKEIVLELVAQVLEHK-DIGFVMVDAK-----KEA 79 (350)
T ss_dssp CCCCCEEECHHHHHHHHTTCSEEEEEEEC--CSCS-SSTTSHHHHHHHHHHHHHHHHGGGS-SEEEEEEETT-----TTH
T ss_pred CCCccEECCHHHHHHHHhhCCeEEEEEEC--CCCc-chhhCchhhhhhHHHHHHHHHHhhc-CcEEEEEeCC-----CCH
Confidence 34579999999999999888999999999 9999 6 88 99999998643 7999999998 789
Q ss_pred HHHhhcCcc-CceEEEec-----------cchHhhhhhhHHHHhhhhcc
Q psy3889 88 DLAKRGCLT-PQLLWAFC-----------VADSLNKTLFILIIFFSSIG 124 (243)
Q Consensus 88 ~l~~~~~V~-~PTi~lF~-----------~~~~l~~~~f~~~~i~~~~g 124 (243)
++|++|+|+ |||+++|+ +.++|++ | +.+..+
T Consensus 80 ~l~~~~~v~~~Pt~~~~~~g~~~~~~G~~~~~~l~~--~----i~~~~~ 122 (350)
T 1sji_A 80 KLAKKLGFDEEGSLYVLKGDRTIEFDGEFAADVLVE--F----LLDLIE 122 (350)
T ss_dssp HHHHHHTCCSTTEEEEEETTEEEEECSCCCHHHHHH--H----HHTTSS
T ss_pred HHHHhcCCCccceEEEEECCcEEEecCCCCHHHHHH--H----HHHhcC
Confidence 999999999 99999997 6778888 8 666554
No 21
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=99.64 E-value=5.1e-16 Score=117.55 Aligned_cols=73 Identities=14% Similarity=0.178 Sum_probs=67.4
Q ss_pred CceEcChhhHHHHhccCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhcCcc-
Q psy3889 22 GHVSLDTHNFDKILSKFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRGCLT- 96 (243)
Q Consensus 22 ~v~~L~~~nF~~~v~~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~~V~- 96 (243)
.+++|+.++|++.+ ++++++|.||+ |||++| |.|+++++.+.+ ++.++.||++ .+++++++|+|.
T Consensus 2 ~v~~l~~~~~~~~~-~~~~~lv~f~a--~wC~~C~~~~~~l~~~~~~~~~--~v~~~~vd~~-----~~~~l~~~~~v~~ 71 (112)
T 2voc_A 2 AIVKATDQSFSAET-SEGVVLADFWA--PWCGPSKMIAPVLEELDQEMGD--KLKIVKIDVD-----ENQETAGKYGVMS 71 (112)
T ss_dssp CCEECCTTTHHHHH-SSSEEEEEEEC--TTBGGGGGHHHHHHHHHHHHTT--TCEEEEEETT-----TCCSHHHHTTCCS
T ss_pred CeEEecHHHHHHHh-CCCEEEEEEEC--CCCHHHHHHHHHHHHHHHHhCC--CcEEEEEECC-----CCHHHHHHcCCCc
Confidence 36899999999999 88999999999 999999 999999999854 7999999997 788899999999
Q ss_pred CceEEEec
Q psy3889 97 PQLLWAFC 104 (243)
Q Consensus 97 ~PTi~lF~ 104 (243)
+||+++|+
T Consensus 72 ~Pt~~~~~ 79 (112)
T 2voc_A 72 IPTLLVLK 79 (112)
T ss_dssp BSEEEEEE
T ss_pred ccEEEEEe
Confidence 99999997
No 22
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=99.64 E-value=7.6e-16 Score=120.76 Aligned_cols=75 Identities=12% Similarity=0.115 Sum_probs=67.8
Q ss_pred CCCceEcChhhHHHHhc------------cCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCC
Q psy3889 20 SKGHVSLDTHNFDKILS------------KFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGE 83 (243)
Q Consensus 20 ~~~v~~L~~~nF~~~v~------------~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~ 83 (243)
...+++|++++|++.+. ++++++|.||+ |||++| |.|+++++.+.+ ++.++.||++
T Consensus 8 ~~~v~~l~~~~f~~~v~~~~~~~~~~~~~~~k~~lv~f~a--~wC~~C~~~~~~l~~l~~~~~~--~v~~~~vd~~---- 79 (136)
T 2l5l_A 8 NGKVIHLTKAEFLAKVYNFEKNPEEWKYEGDKPAIVDFYA--DWCGPCKMVAPILDELAKEYDG--QIVIYKVDTE---- 79 (136)
T ss_dssp TTSEEEECHHHHHHHTBCTTTCSSSCCBCCSSCEEEEEEC--TTSHHHHHHHHHHHHHHHHTTT--TCEEEEEETT----
T ss_pred CCceEEecchHHHHHHHhhccCccceeecCCCEEEEEEEC--CcCHHHHHHHHHHHHHHHHhcC--CEEEEEEeCC----
Confidence 34689999999999884 46899999999 999999 999999998853 6999999997
Q ss_pred cccHHHHhhcCcc-CceEEEe
Q psy3889 84 RDNEDLAKRGCLT-PQLLWAF 103 (243)
Q Consensus 84 ~~n~~l~~~~~V~-~PTi~lF 103 (243)
.+.+++++|+|. +||+++|
T Consensus 80 -~~~~l~~~~~v~~~Pt~~~~ 99 (136)
T 2l5l_A 80 -KEQELAGAFGIRSIPSILFI 99 (136)
T ss_dssp -TCHHHHHHTTCCSSCEEEEE
T ss_pred -CCHHHHHHcCCCCCCEEEEE
Confidence 789999999999 9999999
No 23
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=99.64 E-value=4.7e-16 Score=122.69 Aligned_cols=84 Identities=12% Similarity=0.142 Sum_probs=73.3
Q ss_pred cCCCceEcChhhHHH-HhccCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhc
Q psy3889 19 LSKGHVSLDTHNFDK-ILSKFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRG 93 (243)
Q Consensus 19 ~~~~v~~L~~~nF~~-~v~~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~ 93 (243)
....+.++++++|++ +++++++++|.||+ |||++| |.|+++++.+.+ ++.++.||++ .+++++++|
T Consensus 4 ~~~~v~~l~~~~f~~~~~~~~~~vlv~F~a--~wC~~C~~~~~~l~~l~~~~~~--~v~~~~vd~~-----~~~~l~~~~ 74 (140)
T 3hz4_A 4 NGSSIIEFEDMTWSQQVEDSKKPVVVMFYS--PACPYCKAMEPYFEEYAKEYGS--SAVFGRINIA-----TNPWTAEKY 74 (140)
T ss_dssp CTTTEEEECHHHHHHHTTTCSSCEEEEEEC--TTCHHHHHHHHHHHHHHHHHTT--TSEEEEEETT-----TCHHHHHHH
T ss_pred CCcceEEcchHhHHHHHHhCCCcEEEEEEC--CCChhHHHHHHHHHHHHHHhCC--ceEEEEEECC-----cCHhHHHHC
Confidence 346799999999995 45788999999999 999999 999999999864 6999999997 789999999
Q ss_pred Ccc-CceEEEeccchHhhh
Q psy3889 94 CLT-PQLLWAFCVADSLNK 111 (243)
Q Consensus 94 ~V~-~PTi~lF~~~~~l~~ 111 (243)
+|. +||+++|+++..+..
T Consensus 75 ~v~~~Pt~~~~~~G~~~~~ 93 (140)
T 3hz4_A 75 GVQGTPTFKFFCHGRPVWE 93 (140)
T ss_dssp TCCEESEEEEEETTEEEEE
T ss_pred CCCcCCEEEEEeCCcEEEE
Confidence 999 999999986554444
No 24
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.64 E-value=1.1e-16 Score=124.06 Aligned_cols=82 Identities=15% Similarity=0.166 Sum_probs=72.5
Q ss_pred hcCCCceEcChhhHHHHh-ccCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhh
Q psy3889 18 VLSKGHVSLDTHNFDKIL-SKFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKR 92 (243)
Q Consensus 18 ~~~~~v~~L~~~nF~~~v-~~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~ 92 (243)
.....++.|+.++|+..+ +++++++|.||+ |||++| |.|+++++.+...+++.++.||++ .+..++++
T Consensus 4 ~~~~~v~~l~~~~~~~~~~~~~~~vlv~f~a--~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~-----~~~~~~~~ 76 (133)
T 2dj3_A 4 GSSGPVKVVVGKTFDAIVMDPKKDVLIEFYA--PWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDAT-----ANDITNDQ 76 (133)
T ss_dssp CSSCSSEECCTTTCCCCCTCTTSEEEEEECC--TTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTT-----TSCCCCSS
T ss_pred cCCCceEEEcCCCHHHHhccCCCcEEEEEEC--CCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCC-----cCHHHHhh
Confidence 355689999999999988 458999999999 999999 999999999975458999999997 67788999
Q ss_pred cCcc-CceEEEeccc
Q psy3889 93 GCLT-PQLLWAFCVA 106 (243)
Q Consensus 93 ~~V~-~PTi~lF~~~ 106 (243)
|+|+ +||+++|.+.
T Consensus 77 ~~v~~~Pt~~~~~~g 91 (133)
T 2dj3_A 77 YKVEGFPTIYFAPSG 91 (133)
T ss_dssp CCCSSSSEEEEECTT
T ss_pred cCCCcCCEEEEEeCC
Confidence 9999 9999999743
No 25
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=99.64 E-value=3.8e-16 Score=117.74 Aligned_cols=81 Identities=21% Similarity=0.286 Sum_probs=72.2
Q ss_pred CCCceEcChhhHHHHhccCCeEEEEEEecCCCCCCc----HHHHHHHHHccCC-CCcEEEEEecccCCCcccHHHHhhcC
Q psy3889 20 SKGHVSLDTHNFDKILSKFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQ-PDFLVAEVGVKDYGERDNEDLAKRGC 94 (243)
Q Consensus 20 ~~~v~~L~~~nF~~~v~~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~-~~v~vakVd~~d~~~~~n~~l~~~~~ 94 (243)
.+.+++++.++|++.+.++++++|.||+ |||++| |.|+++++.+... .++.++.||++ .+.+++++|+
T Consensus 6 ~~~v~~l~~~~~~~~~~~~~~~lv~f~~--~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~-----~~~~~~~~~~ 78 (120)
T 1mek_A 6 EDHVLVLRKSNFAEALAAHKYLLVEFYA--PWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDAT-----EESDLAQQYG 78 (120)
T ss_dssp ETTEEECCTTTHHHHHHHCSEEEEEEEC--SSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETT-----TCCSSHHHHT
T ss_pred CCCcEEechhhHHHHHccCCeEEEEEEC--CCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCC-----CCHHHHHHCC
Confidence 4578999999999999888999999999 999999 9999999988642 57999999997 6788999999
Q ss_pred cc-CceEEEeccch
Q psy3889 95 LT-PQLLWAFCVAD 107 (243)
Q Consensus 95 V~-~PTi~lF~~~~ 107 (243)
|+ +||+++|+++.
T Consensus 79 v~~~Pt~~~~~~g~ 92 (120)
T 1mek_A 79 VRGYPTIKFFRNGD 92 (120)
T ss_dssp CCSSSEEEEEESSC
T ss_pred CCcccEEEEEeCCC
Confidence 99 99999997544
No 26
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=99.64 E-value=6.8e-16 Score=114.29 Aligned_cols=76 Identities=17% Similarity=0.124 Sum_probs=69.5
Q ss_pred CCceEcChhhHHHHhccCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhcCcc
Q psy3889 21 KGHVSLDTHNFDKILSKFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRGCLT 96 (243)
Q Consensus 21 ~~v~~L~~~nF~~~v~~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~~V~ 96 (243)
..++++++++|++.+ ++++++|.||+ |||++| |.|+++++.+.+ ++.++.||++ .+++++++|+|+
T Consensus 3 ~~v~~l~~~~~~~~~-~~~~~lv~f~~--~~C~~C~~~~~~~~~~~~~~~~--~~~~~~v~~~-----~~~~~~~~~~v~ 72 (106)
T 3die_A 3 MAIVKVTDADFDSKV-ESGVQLVDFWA--TACGPCKMIAPVLEELAADYEG--KADILKLDVD-----ENPSTAAKYEVM 72 (106)
T ss_dssp CCCEECCTTTHHHHS-CSSEEEEEEEC--SBCHHHHHHHHHHHHHHHHTTT--TCEEEEEETT-----TCHHHHHHTTCC
T ss_pred cceEECCHHHHHHHh-cCCcEEEEEEC--CCCHHHHHHhHHHHHHHHHhcC--CcEEEEEECC-----cCHHHHHhCCCc
Confidence 468999999999999 88999999999 999999 999999999854 5999999997 789999999999
Q ss_pred -CceEEEeccc
Q psy3889 97 -PQLLWAFCVA 106 (243)
Q Consensus 97 -~PTi~lF~~~ 106 (243)
+||+++|+++
T Consensus 73 ~~Pt~~~~~~G 83 (106)
T 3die_A 73 SIPTLIVFKDG 83 (106)
T ss_dssp SBSEEEEEETT
T ss_pred ccCEEEEEeCC
Confidence 9999999743
No 27
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=99.64 E-value=7.7e-16 Score=114.19 Aligned_cols=75 Identities=20% Similarity=0.220 Sum_probs=68.3
Q ss_pred ceEcChhhHHHHhccCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhcCcc-C
Q psy3889 23 HVSLDTHNFDKILSKFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRGCLT-P 97 (243)
Q Consensus 23 v~~L~~~nF~~~v~~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~~V~-~ 97 (243)
++++++++|++++.++++++|.||+ |||++| |.|+++++.+.+ ++.++.||++ ++++++++|+|. +
T Consensus 2 v~~l~~~~~~~~~~~~~~~~v~f~~--~~C~~C~~~~~~l~~~~~~~~~--~v~~~~v~~~-----~~~~~~~~~~v~~~ 72 (105)
T 1nsw_A 2 TMTLTDANFQQAIQGDGPVLVDFWA--AWCGPCRMMAPVLEEFAEAHAD--KVTVAKLNVD-----ENPETTSQFGIMSI 72 (105)
T ss_dssp CEEECTTTHHHHHSSSSCEEEEEEC--TTCHHHHHHHHHHHHHHHHSTT--TCEEEEEETT-----TCHHHHHHTTCCSS
T ss_pred ceeccHHhHHHHHhCCCcEEEEEEC--CCCHHHHHHHHHHHHHHHHhcC--CcEEEEEECc-----CCHHHHHHcCCccc
Confidence 6899999999888888999999999 999999 999999998853 5999999997 789999999999 9
Q ss_pred ceEEEeccc
Q psy3889 98 QLLWAFCVA 106 (243)
Q Consensus 98 PTi~lF~~~ 106 (243)
||+++|+++
T Consensus 73 Pt~~~~~~G 81 (105)
T 1nsw_A 73 PTLILFKGG 81 (105)
T ss_dssp SEEEEEETT
T ss_pred cEEEEEeCC
Confidence 999999744
No 28
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.64 E-value=5.4e-16 Score=121.15 Aligned_cols=80 Identities=20% Similarity=0.294 Sum_probs=71.7
Q ss_pred CCCceEcChhhHHHHhccCCeEEEEEEecCCCCCCc----HHHHHHHHHccC-CCCcEEEEEecccCCCcccHHHHhhcC
Q psy3889 20 SKGHVSLDTHNFDKILSKFHTTLVKFDIAYPYGAKH----EAFLEVAESSKH-QPDFLVAEVGVKDYGERDNEDLAKRGC 94 (243)
Q Consensus 20 ~~~v~~L~~~nF~~~v~~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~-~~~v~vakVd~~d~~~~~n~~l~~~~~ 94 (243)
...++.|+..+|++.+..++++||.||+ |||++| |.|+++++.+.+ ..++.++.||++ .+.+++++|+
T Consensus 16 ~~~v~~l~~~~~~~~~~~~~~vlv~f~a--~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~-----~~~~~~~~~~ 88 (140)
T 2dj1_A 16 ENGVWVLNDGNFDNFVADKDTVLLEFYA--PWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDAT-----SASMLASKFD 88 (140)
T ss_dssp ETTEEECCTTTHHHHHTTCSEEEEEECC--TTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTT-----TCHHHHHHTT
T ss_pred CCCCEEcChHhHHHHHhcCCeEEEEEEC--CCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCc-----ccHHHHHHCC
Confidence 3568999999999999888999999999 999999 999999999864 235999999997 7899999999
Q ss_pred cc-CceEEEeccc
Q psy3889 95 LT-PQLLWAFCVA 106 (243)
Q Consensus 95 V~-~PTi~lF~~~ 106 (243)
|. +||+++|++.
T Consensus 89 v~~~Pt~~~~~~G 101 (140)
T 2dj1_A 89 VSGYPTIKILKKG 101 (140)
T ss_dssp CCSSSEEEEEETT
T ss_pred CCccCeEEEEECC
Confidence 99 9999999743
No 29
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=99.64 E-value=4.7e-16 Score=118.91 Aligned_cols=83 Identities=16% Similarity=0.180 Sum_probs=70.8
Q ss_pred cCCCceEcChhhHHHHhc--cCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhh
Q psy3889 19 LSKGHVSLDTHNFDKILS--KFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKR 92 (243)
Q Consensus 19 ~~~~v~~L~~~nF~~~v~--~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~ 92 (243)
+.......+.++|++.+. ++++++|.||+ |||++| |.|+++++.+. ++.+++||++ ++++++++
T Consensus 10 ~~~~~~~~t~~~f~~~l~~~~~k~vlv~F~a--~wC~~C~~~~p~l~~l~~~~~---~v~~~~vd~d-----~~~~l~~~ 79 (116)
T 3qfa_C 10 HGSVKQIESKTAFQEALDAAGDKLVVVDFSA--TWCGPSKMIKPFFHSLSEKYS---NVIFLEVDVD-----DCQDVASE 79 (116)
T ss_dssp --CCBCCCCHHHHHHHHHHHTTSCEEEEEEC--TTCHHHHHHHHHHHHHHTTCT---TSEEEEEETT-----TTHHHHHH
T ss_pred CCcccCCCCHHHHHHHHHhcCCCEEEEEEEC--CCCHHHHHHHHHHHHHHHHCC---CCEEEEEECC-----CCHHHHHH
Confidence 445678889999999996 89999999999 999999 99999998874 3999999997 78999999
Q ss_pred cCcc-CceEEEeccchHhhh
Q psy3889 93 GCLT-PQLLWAFCVADSLNK 111 (243)
Q Consensus 93 ~~V~-~PTi~lF~~~~~l~~ 111 (243)
|+|. +||+++|+++..+..
T Consensus 80 ~~v~~~Pt~~~~~~G~~~~~ 99 (116)
T 3qfa_C 80 CEVKSMPTFQFFKKGQKVGE 99 (116)
T ss_dssp TTCCSSSEEEEESSSSEEEE
T ss_pred cCCccccEEEEEeCCeEEEE
Confidence 9999 999999975543333
No 30
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=99.64 E-value=6.1e-16 Score=124.87 Aligned_cols=79 Identities=14% Similarity=0.139 Sum_probs=71.1
Q ss_pred CCCceEcChhhHHHHhccCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhcCc
Q psy3889 20 SKGHVSLDTHNFDKILSKFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRGCL 95 (243)
Q Consensus 20 ~~~v~~L~~~nF~~~v~~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~~V 95 (243)
...++++++.+|++.+.++++++|.||+ |||++| |.|+++++.+.+ ++.|++||++ ++++++++|+|
T Consensus 46 ~~~~~~l~~~~f~~~~~~~~~vlv~F~a--~wC~~C~~~~p~l~~la~~~~~--~v~~~~vd~~-----~~~~l~~~~~i 116 (155)
T 2ppt_A 46 TGKVAGIDPAILARAERDDLPLLVDFWA--PWCGPCRQMAPQFQAAAATLAG--QVRLAKIDTQ-----AHPAVAGRHRI 116 (155)
T ss_dssp CSSEEECCHHHHHHHTTCSSCEEEEEEC--TTCHHHHHHHHHHHHHHHHHTT--TCEEEEEETT-----TSTHHHHHTTC
T ss_pred CCCCccCCHHHHHHHHhCCCcEEEEEEC--CCCHHHHHHHHHHHHHHHHccC--CEEEEEEeCC-----ccHHHHHHcCC
Confidence 4458899999999999778999999999 999999 999999999854 6999999997 78899999999
Q ss_pred c-CceEEEeccch
Q psy3889 96 T-PQLLWAFCVAD 107 (243)
Q Consensus 96 ~-~PTi~lF~~~~ 107 (243)
+ +||+++|+++.
T Consensus 117 ~~~Pt~~~~~~G~ 129 (155)
T 2ppt_A 117 QGIPAFILFHKGR 129 (155)
T ss_dssp CSSSEEEEEETTE
T ss_pred CcCCEEEEEeCCe
Confidence 9 99999997443
No 31
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=99.64 E-value=7.7e-16 Score=114.56 Aligned_cols=78 Identities=13% Similarity=0.189 Sum_probs=69.2
Q ss_pred CceEcChhhHHHHh-ccCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhcCcc
Q psy3889 22 GHVSLDTHNFDKIL-SKFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRGCLT 96 (243)
Q Consensus 22 ~v~~L~~~nF~~~v-~~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~~V~ 96 (243)
.++++++++|++.+ +++++++|.||+ |||++| |.|+++++.+.+ ++.++.||++ .+++++++|+|.
T Consensus 2 ~v~~l~~~~~~~~~~~~~~~~lv~f~~--~~C~~C~~~~~~l~~~~~~~~~--~~~~~~v~~~-----~~~~~~~~~~v~ 72 (107)
T 1dby_A 2 EAGAVNDDTFKNVVLESSVPVLVDFWA--PWCGPCRIIAPVVDEIAGEYKD--KLKCVKLNTD-----ESPNVASEYGIR 72 (107)
T ss_dssp CCEEECHHHHHHHTTTCSSCEEEEEEC--TTCHHHHHHHHHHHHHHHHTTT--TCEEEEEETT-----TCHHHHHHHTCC
T ss_pred ccEeccHHHHHHHHhcCCCcEEEEEEC--CCCHhHHHHHHHHHHHHHHhCC--ceEEEEEECC-----CCHHHHHHCCCC
Confidence 47899999999977 778999999999 999999 999999998853 6999999997 789999999999
Q ss_pred -CceEEEeccchH
Q psy3889 97 -PQLLWAFCVADS 108 (243)
Q Consensus 97 -~PTi~lF~~~~~ 108 (243)
+||+++|+++..
T Consensus 73 ~~Pt~~~~~~G~~ 85 (107)
T 1dby_A 73 SIPTIMVFKGGKK 85 (107)
T ss_dssp SSCEEEEESSSSE
T ss_pred cCCEEEEEeCCEE
Confidence 999999974433
No 32
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=99.64 E-value=8.3e-16 Score=115.50 Aligned_cols=78 Identities=10% Similarity=0.125 Sum_probs=69.5
Q ss_pred CCceEcChhhHHHHh-ccCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhcCc
Q psy3889 21 KGHVSLDTHNFDKIL-SKFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRGCL 95 (243)
Q Consensus 21 ~~v~~L~~~nF~~~v-~~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~~V 95 (243)
+.++.+++++|++.+ +++++++|.||+ |||++| |.|+++++.+.+ ++.++.||++ .+++++++|+|
T Consensus 5 ~~v~~l~~~~~~~~~~~~~~~~vv~f~~--~~C~~C~~~~~~l~~~~~~~~~--~~~~~~v~~~-----~~~~~~~~~~v 75 (112)
T 1t00_A 5 GTLKHVTDDSFEQDVLKNDKPVLVDFWA--AWCGPCRQIAPSLEAIAAEYGD--KIEIVKLNID-----ENPGTAAKYGV 75 (112)
T ss_dssp CCCEEECTTTHHHHTTTCSSCEEEEEEC--TTCHHHHHHHHHHHHHHHHTTT--TCEEEEEETT-----TCHHHHHHTTC
T ss_pred ceEEecchhhHHHHHhhCCCeEEEEEEC--CCCHhHHhcCHHHHHHHHHhcC--CeEEEEEEcC-----CCHHHHHhCCC
Confidence 468999999998876 778999999999 999999 999999998853 6999999997 78999999999
Q ss_pred c-CceEEEeccch
Q psy3889 96 T-PQLLWAFCVAD 107 (243)
Q Consensus 96 ~-~PTi~lF~~~~ 107 (243)
. +||+++|+++.
T Consensus 76 ~~~Pt~~~~~~G~ 88 (112)
T 1t00_A 76 MSIPTLNVYQGGE 88 (112)
T ss_dssp CSSSEEEEEETTE
T ss_pred CcccEEEEEeCCE
Confidence 9 99999997443
No 33
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=99.64 E-value=9.7e-16 Score=116.99 Aligned_cols=83 Identities=12% Similarity=0.157 Sum_probs=72.4
Q ss_pred CCCceEcChhhHHHH-hccCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhcC
Q psy3889 20 SKGHVSLDTHNFDKI-LSKFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRGC 94 (243)
Q Consensus 20 ~~~v~~L~~~nF~~~-v~~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~~ 94 (243)
++.+++|++++|++. +.++++++|.||+ |||++| |.|+++++.+.+ ++.++.||++ .+++++++|+
T Consensus 2 ~~~v~~l~~~~f~~~~~~~~~~~lv~f~a--~~C~~C~~~~~~~~~~~~~~~~--~~~~~~vd~~-----~~~~~~~~~~ 72 (122)
T 3aps_A 2 PQASIDLTPQTFNEKVLQGKTHWVVDFYA--PWCGPCQNFAPEFELLARMIKG--KVRAGKVDCQ-----AYPQTCQKAG 72 (122)
T ss_dssp CCCSEECCHHHHHHHTTTCSSCEEEEEEC--TTCHHHHHHHHHHHHHHHHHTT--TCEEEEEETT-----TCHHHHHHTT
T ss_pred CcchhcCCHHHHHHHHhcCCCeEEEEEEC--CCCHHHHHHHHHHHHHHHHhcC--CeEEEEEeCc-----CCHHHHHHcC
Confidence 457899999999764 4788999999999 999999 999999999864 7999999997 7899999999
Q ss_pred cc-CceEEEeccchHhhh
Q psy3889 95 LT-PQLLWAFCVADSLNK 111 (243)
Q Consensus 95 V~-~PTi~lF~~~~~l~~ 111 (243)
|+ +||+++|.....+..
T Consensus 73 v~~~Pt~~~~~~~~~~~~ 90 (122)
T 3aps_A 73 IKAYPSVKLYQYERAKKS 90 (122)
T ss_dssp CCSSSEEEEEEEEGGGTE
T ss_pred CCccceEEEEeCCCccce
Confidence 99 999999975544444
No 34
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=99.63 E-value=8e-16 Score=114.05 Aligned_cols=76 Identities=24% Similarity=0.276 Sum_probs=69.3
Q ss_pred CceEcChhhHHHHhccCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhcCcc-
Q psy3889 22 GHVSLDTHNFDKILSKFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRGCLT- 96 (243)
Q Consensus 22 ~v~~L~~~nF~~~v~~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~~V~- 96 (243)
.+++|++++|+++++++++++|.||+ |||++| |.|+++++.+.+ ++.++.||++ .+++++++|+|.
T Consensus 2 ~v~~l~~~~~~~~~~~~~~~lv~f~~--~~C~~C~~~~~~l~~~~~~~~~--~~~~~~v~~~-----~~~~~~~~~~v~~ 72 (109)
T 2yzu_A 2 KPIEVTDQNFDETLGQHPLVLVDFWA--EWCAPCRMIAPILEEIAKEYEG--KLLVAKLDVD-----ENPKTAMRYRVMS 72 (109)
T ss_dssp CCEECCTTTHHHHHHHCSEEEEEEEC--TTCHHHHHHHHHHHHHHHHTBT--TBEEEEEETT-----TCHHHHHHTTCCS
T ss_pred cceEccHhHHHHHhcCCCeEEEEEEC--CCCHHHHHhhHHHHHHHHHhhC--ceEEEEEECC-----CCHhHHHhCCCCc
Confidence 57899999999888888999999999 999999 999999998864 6999999997 789999999999
Q ss_pred CceEEEeccc
Q psy3889 97 PQLLWAFCVA 106 (243)
Q Consensus 97 ~PTi~lF~~~ 106 (243)
+||+++|+++
T Consensus 73 ~Pt~~~~~~g 82 (109)
T 2yzu_A 73 IPTVILFKDG 82 (109)
T ss_dssp SSEEEEEETT
T ss_pred CCEEEEEeCC
Confidence 9999999743
No 35
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=99.63 E-value=9.3e-16 Score=112.55 Aligned_cols=75 Identities=23% Similarity=0.281 Sum_probs=67.7
Q ss_pred ceEcChhhHHHHhccCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhcCcc-C
Q psy3889 23 HVSLDTHNFDKILSKFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRGCLT-P 97 (243)
Q Consensus 23 v~~L~~~nF~~~v~~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~~V~-~ 97 (243)
|+++++++|++.+.++++++|.||+ |||++| |.|+++++.+. ++.++.||++ .+++++++|+|. +
T Consensus 1 V~~l~~~~~~~~~~~~~~~~v~f~~--~~C~~C~~~~~~~~~~~~~~~---~~~~~~v~~~-----~~~~~~~~~~v~~~ 70 (104)
T 2e0q_A 1 VIHLDSKNFDSFLASHEIAVVDFWA--EWCAPCLILAPIIEELAEDYP---QVGFGKLNSD-----ENPDIAARYGVMSL 70 (104)
T ss_dssp CEECCTTTHHHHHHHSSEEEEEEEC--TTCHHHHHHHHHHHHHHHHCT---TSEEEEEETT-----TCHHHHHHTTCCSS
T ss_pred CeecCHHHHHHHHhcCCcEEEEEEC--CCChhHHHHhHHHHHHHHHcC---CceEEEEECC-----CCHHHHHhCCcccc
Confidence 5789999999999888999999999 999999 89999998874 3999999997 789999999999 9
Q ss_pred ceEEEeccch
Q psy3889 98 QLLWAFCVAD 107 (243)
Q Consensus 98 PTi~lF~~~~ 107 (243)
||+++|+++.
T Consensus 71 Pt~~~~~~g~ 80 (104)
T 2e0q_A 71 PTVIFFKDGE 80 (104)
T ss_dssp CEEEEEETTE
T ss_pred CEEEEEECCe
Confidence 9999997443
No 36
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=99.63 E-value=1.1e-15 Score=114.32 Aligned_cols=77 Identities=17% Similarity=0.192 Sum_probs=67.2
Q ss_pred ceEc-ChhhHHHHh--ccCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhcCc
Q psy3889 23 HVSL-DTHNFDKIL--SKFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRGCL 95 (243)
Q Consensus 23 v~~L-~~~nF~~~v--~~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~~V 95 (243)
++++ +.++|++.+ .++++++|.||+ |||++| |.|+++++.+ +++.++.||++ .+++++++|+|
T Consensus 3 v~~i~~~~~~~~~~~~~~~~~v~v~f~a--~wC~~C~~~~~~~~~~~~~~---~~~~~~~vd~~-----~~~~~~~~~~v 72 (107)
T 1gh2_A 3 VKPVGSDPDFQPELSGAGSRLAVVKFTM--RGCGPCLRIAPAFSSMSNKY---PQAVFLEVDVH-----QCQGTAATNNI 72 (107)
T ss_dssp EEEECSGGGHHHHHHHTTTSCEEEEEEC--SSCHHHHHHHHHHHHHHHHC---TTSEEEEEETT-----TSHHHHHHTTC
T ss_pred eEEecCHHHHHHHHHhCCCCEEEEEEEC--CCChhhHHHHHHHHHHHHHC---CCcEEEEEECc-----cCHHHHHhcCC
Confidence 4555 679999999 578999999999 999999 9999999988 37999999997 78999999999
Q ss_pred c-CceEEEeccchHh
Q psy3889 96 T-PQLLWAFCVADSL 109 (243)
Q Consensus 96 ~-~PTi~lF~~~~~l 109 (243)
. +||+++|+++..+
T Consensus 73 ~~~Pt~~~~~~G~~~ 87 (107)
T 1gh2_A 73 SATPTFQFFRNKVRI 87 (107)
T ss_dssp CSSSEEEEEETTEEE
T ss_pred CcccEEEEEECCeEE
Confidence 9 9999999754433
No 37
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=99.63 E-value=1e-15 Score=119.21 Aligned_cols=78 Identities=15% Similarity=0.167 Sum_probs=70.0
Q ss_pred CceEcCh-hhHHHHhccCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhcCcc
Q psy3889 22 GHVSLDT-HNFDKILSKFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRGCLT 96 (243)
Q Consensus 22 ~v~~L~~-~nF~~~v~~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~~V~ 96 (243)
-+++|++ ++|++.+.++++++|.||+ |||++| |.|+++++.+ +++.++.||++ ++.+++++|+|.
T Consensus 20 mv~~l~~~~~f~~~~~~~k~vvv~F~a--~wC~~C~~~~p~l~~l~~~~---~~v~~~~vd~d-----~~~~l~~~~~v~ 89 (125)
T 1r26_A 20 SVVDVYSVEQFRNIMSEDILTVAWFTA--VWCGPCKTIERPMEKIAYEF---PTVKFAKVDAD-----NNSEIVSKCRVL 89 (125)
T ss_dssp CCEEECCHHHHHHHHHSSSCEEEEEEC--TTCHHHHHTHHHHHHHHHHC---TTSEEEEEETT-----TCHHHHHHTTCC
T ss_pred ceEECCCHHHHHHHHccCCEEEEEEEC--CcCHhHHHHHHHHHHHHHHC---CCCEEEEEECC-----CCHHHHHHcCCC
Confidence 3789998 9999999888999999999 999999 9999999987 36999999997 789999999999
Q ss_pred -CceEEEeccchHh
Q psy3889 97 -PQLLWAFCVADSL 109 (243)
Q Consensus 97 -~PTi~lF~~~~~l 109 (243)
+||+++|+++..+
T Consensus 90 ~~Pt~~i~~~G~~~ 103 (125)
T 1r26_A 90 QLPTFIIARSGKML 103 (125)
T ss_dssp SSSEEEEEETTEEE
T ss_pred cccEEEEEeCCeEE
Confidence 9999999755433
No 38
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=99.63 E-value=1.8e-15 Score=113.75 Aligned_cols=82 Identities=6% Similarity=0.182 Sum_probs=68.1
Q ss_pred CceEcCh-hhHHHHhcc---CCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhc
Q psy3889 22 GHVSLDT-HNFDKILSK---FHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRG 93 (243)
Q Consensus 22 ~v~~L~~-~nF~~~v~~---~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~ 93 (243)
.++++++ ++|++.+.. +++++|.||+ |||++| |.|+++++.+.. +++.++.||++ .+++++++|
T Consensus 1 ~v~~i~~~~~~~~~~~~~~~~~~~~v~f~a--~wC~~C~~~~~~~~~~~~~~~~-~~~~~~~vd~~-----~~~~~~~~~ 72 (112)
T 3d6i_A 1 PVIEINDQEQFTYLTTTAAGDKLIVLYFHT--SWAEPCKALKQVFEAISNEPSN-SNVSFLSIDAD-----ENSEISELF 72 (112)
T ss_dssp CEEEECCHHHHHHHHTTTTTTCCEEEEEEC--CC--CHHHHHHHHHHHHHCGGG-TTSEEEEEETT-----TCHHHHHHT
T ss_pred CccccCCHHHHHHHHhcccCCCEEEEEEEC--CCCHHHHHHHHHHHHHHHhcCC-CCEEEEEEecc-----cCHHHHHHc
Confidence 3678887 999999965 8899999999 999999 999999988642 46999999997 789999999
Q ss_pred Ccc-CceEEEeccchHhhh
Q psy3889 94 CLT-PQLLWAFCVADSLNK 111 (243)
Q Consensus 94 ~V~-~PTi~lF~~~~~l~~ 111 (243)
+|+ +||+++|+++..+..
T Consensus 73 ~v~~~Pt~~~~~~G~~~~~ 91 (112)
T 3d6i_A 73 EISAVPYFIIIHKGTILKE 91 (112)
T ss_dssp TCCSSSEEEEEETTEEEEE
T ss_pred CCCcccEEEEEECCEEEEE
Confidence 999 999999975544433
No 39
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=99.62 E-value=1.3e-15 Score=120.81 Aligned_cols=79 Identities=14% Similarity=0.188 Sum_probs=71.8
Q ss_pred cCCCceEcChhhHHHHhccCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhcC
Q psy3889 19 LSKGHVSLDTHNFDKILSKFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRGC 94 (243)
Q Consensus 19 ~~~~v~~L~~~nF~~~v~~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~~ 94 (243)
....++.++..+|++.+.++++++|.||+ |||++| |.|+++++.+.+ ++.++.||++ .+++++++|+
T Consensus 36 ~~~~v~~l~~~~~~~~~~~~k~vlv~F~a--~wC~~C~~~~p~l~~~~~~~~~--~~~~~~vd~~-----~~~~l~~~~~ 106 (148)
T 3p2a_A 36 FDGEVINATAETLDKLLQDDLPMVIDFWA--PWCGPCRSFAPIFAETAAERAG--KVRFVKVNTE-----AEPALSTRFR 106 (148)
T ss_dssp TCCCCEECCTTTHHHHTTCSSCEEEEEEC--SSCHHHHHHHHHHHHHHHHTTT--TCEEEEEETT-----TCHHHHHHTT
T ss_pred ccCCceecCHHHHHHHHhcCCcEEEEEEC--CCCHHHHHHHHHHHHHHHHcCC--ceEEEEEECc-----CCHHHHHHCC
Confidence 34579999999999999889999999999 999999 999999999853 6999999997 7899999999
Q ss_pred cc-CceEEEeccc
Q psy3889 95 LT-PQLLWAFCVA 106 (243)
Q Consensus 95 V~-~PTi~lF~~~ 106 (243)
|. +||+++|+++
T Consensus 107 v~~~Pt~~~~~~G 119 (148)
T 3p2a_A 107 IRSIPTIMLYRNG 119 (148)
T ss_dssp CCSSSEEEEEETT
T ss_pred CCccCEEEEEECC
Confidence 99 9999999743
No 40
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=99.62 E-value=1.1e-15 Score=113.31 Aligned_cols=78 Identities=17% Similarity=0.155 Sum_probs=70.0
Q ss_pred CCceEcChhhHHHHh-ccCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhcCc
Q psy3889 21 KGHVSLDTHNFDKIL-SKFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRGCL 95 (243)
Q Consensus 21 ~~v~~L~~~nF~~~v-~~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~~V 95 (243)
+.++++++++|++.+ .++++++|.||+ |||++| |.|+++++.+.+ ++.++.||++ .+++++++|+|
T Consensus 2 ~~v~~l~~~~~~~~~~~~~~~~lv~f~~--~~C~~C~~~~~~~~~~~~~~~~--~~~~~~v~~~-----~~~~~~~~~~v 72 (107)
T 2i4a_A 2 EHTLAVSDSSFDQDVLKASGLVLVDFWA--EWCGPCKMIGPALGEIGKEFAG--KVTVAKVNID-----DNPETPNAYQV 72 (107)
T ss_dssp CCEEECCTTTHHHHTTTCSSEEEEEEEC--TTCHHHHHHHHHHHHHHHHHTT--SEEEEEEETT-----TCCHHHHHTTC
T ss_pred CceeecchhhhhHHHHhCCCEEEEEEEC--CCChhHHHHhHHHHHHHHHhCC--cEEEEEEECC-----CCHHHHHhcCC
Confidence 468999999999877 788999999999 999999 999999998854 7999999997 78899999999
Q ss_pred c-CceEEEeccch
Q psy3889 96 T-PQLLWAFCVAD 107 (243)
Q Consensus 96 ~-~PTi~lF~~~~ 107 (243)
. +||+++|+++.
T Consensus 73 ~~~Pt~~~~~~G~ 85 (107)
T 2i4a_A 73 RSIPTLMLVRDGK 85 (107)
T ss_dssp CSSSEEEEEETTE
T ss_pred CccCEEEEEeCCE
Confidence 9 99999997443
No 41
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=99.62 E-value=6.8e-16 Score=120.42 Aligned_cols=82 Identities=18% Similarity=0.172 Sum_probs=70.5
Q ss_pred hhcCCCceEcChhhHHHHh-ccCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHh
Q psy3889 17 LVLSKGHVSLDTHNFDKIL-SKFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAK 91 (243)
Q Consensus 17 ~~~~~~v~~L~~~nF~~~v-~~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~ 91 (243)
......+++|+.++|++.+ +++++++|.||+ |||++| |.|+++++.+.+ ++.++.||++ .++++++
T Consensus 18 ~~m~~~v~~l~~~~f~~~~~~~~k~vlv~F~a--~wC~~C~~~~p~l~~l~~~~~~--~v~~~~vd~~-----~~~~l~~ 88 (128)
T 2o8v_B 18 GSHSDKIIHLTDDSFDTDVLKADGAILVDFWA--EWCGPAKMIAPILDEIADEYQG--KLTVAKLNID-----QNPGTAP 88 (128)
T ss_dssp ---CCCSEEECTTTHHHHTTTCSSEEEEEEEC--SSCHHHHHTHHHHHHHHHHTTT--TEEEEEEETT-----TCCTTSG
T ss_pred cccccccEecChhhHHHHHHhcCCEEEEEEEC--CCCHHHHHHhHHHHHHHHHhcC--CeEEEEEECC-----CCHHHHH
Confidence 3345679999999999766 788999999999 999999 999999998854 6999999997 7788999
Q ss_pred hcCcc-CceEEEeccch
Q psy3889 92 RGCLT-PQLLWAFCVAD 107 (243)
Q Consensus 92 ~~~V~-~PTi~lF~~~~ 107 (243)
+|+|. +||+++|+++.
T Consensus 89 ~~~v~~~Pt~~~~~~G~ 105 (128)
T 2o8v_B 89 KYGIRGIPTLLLFKNGE 105 (128)
T ss_dssp GGTCCSSSEEEEEETTE
T ss_pred HcCCCccCEEEEEeCCE
Confidence 99999 99999997443
No 42
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=99.62 E-value=1.6e-15 Score=114.16 Aligned_cols=82 Identities=11% Similarity=0.131 Sum_probs=70.9
Q ss_pred cCCCceEcChhhHHHHhc--cCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhh
Q psy3889 19 LSKGHVSLDTHNFDKILS--KFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKR 92 (243)
Q Consensus 19 ~~~~v~~L~~~nF~~~v~--~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~ 92 (243)
..+.++.|+.++|++.+. ++++++|.||+ |||++| |.|+++++.+. ++.++.||+++ .+.+++++
T Consensus 3 ~~~~v~~l~~~~~~~~~~~~~~~~vlv~f~a--~wC~~C~~~~~~l~~~~~~~~---~v~~~~vd~~~----~~~~~~~~ 73 (111)
T 2pu9_C 3 IVGKVTEVNKDTFWPIVKAAGDKPVVLDMFT--QWCGPSKAMAPKYEKLAEEYL---DVIFLKLDCNQ----ENKTLAKE 73 (111)
T ss_dssp CTTSEEEECTTTHHHHHTTCTTSCEEEEEEC--TTCHHHHHHHHHHHHHHHHCT---TSEEEEEECSS----TTHHHHHH
T ss_pred CcCccEEechHHHHHHHHhcCCCEEEEEEEC--CcCHhHHHHCHHHHHHHHHCC---CeEEEEEecCc----chHHHHHH
Confidence 356799999999999984 58899999999 999999 99999998874 59999999962 57899999
Q ss_pred cCcc-CceEEEeccchHh
Q psy3889 93 GCLT-PQLLWAFCVADSL 109 (243)
Q Consensus 93 ~~V~-~PTi~lF~~~~~l 109 (243)
|+|+ +||+++|+++.-+
T Consensus 74 ~~v~~~Pt~~~~~~G~~~ 91 (111)
T 2pu9_C 74 LGIRVVPTFKILKENSVV 91 (111)
T ss_dssp HCCSBSSEEEEESSSSEE
T ss_pred cCCCeeeEEEEEeCCcEE
Confidence 9999 9999998755433
No 43
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=99.62 E-value=1.1e-15 Score=116.98 Aligned_cols=80 Identities=16% Similarity=0.177 Sum_probs=70.6
Q ss_pred cCCCceEcChhhHHHHh-ccCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhc
Q psy3889 19 LSKGHVSLDTHNFDKIL-SKFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRG 93 (243)
Q Consensus 19 ~~~~v~~L~~~nF~~~v-~~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~ 93 (243)
++..++.+++++|++.+ +++++++|.||+ |||++| |.|+++++.+.+ ++.++.||++ .+.+++++|
T Consensus 11 ~~~~~~~~~~~~f~~~v~~~~k~vlv~f~a--~~C~~C~~~~~~l~~~~~~~~~--~v~~~~vd~d-----~~~~l~~~~ 81 (119)
T 1w4v_A 11 GSTTFNIQDGPDFQDRVVNSETPVVVDFHA--QWCGPCKILGPRLEKMVAKQHG--KVVMAKVDID-----DHTDLAIEY 81 (119)
T ss_dssp CCSEEECCSHHHHHHHTTTCSSCEEEEEEC--TTCHHHHHHHHHHHHHHHHTTT--SSEEEEEETT-----TTHHHHHHT
T ss_pred CceEEEecChhhHHHHHHcCCCcEEEEEEC--CCCHHHHHHHHHHHHHHHHhcC--CeEEEEEeCC-----CCHHHHHHc
Confidence 44568999999999976 778899999999 999999 899999988853 6999999997 789999999
Q ss_pred Ccc-CceEEEeccch
Q psy3889 94 CLT-PQLLWAFCVAD 107 (243)
Q Consensus 94 ~V~-~PTi~lF~~~~ 107 (243)
+|. +||+++|+++.
T Consensus 82 ~v~~~Pt~~~~~~G~ 96 (119)
T 1w4v_A 82 EVSAVPTVLAMKNGD 96 (119)
T ss_dssp TCCSSSEEEEEETTE
T ss_pred CCCcccEEEEEeCCc
Confidence 999 99999997443
No 44
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.61 E-value=1e-15 Score=117.91 Aligned_cols=76 Identities=16% Similarity=0.226 Sum_probs=67.7
Q ss_pred cCCCceEcChhhHHHHhccCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhcC
Q psy3889 19 LSKGHVSLDTHNFDKILSKFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRGC 94 (243)
Q Consensus 19 ~~~~v~~L~~~nF~~~v~~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~~ 94 (243)
..+.+++|++++|++++.+ .++|.||+ |||++| |.|+++++.+.+ .++.++.||++ ++.+++++|+
T Consensus 5 ~~~~v~~l~~~~f~~~~~~--~vlv~f~a--~wC~~C~~~~p~~~~~~~~~~~-~~v~~~~vd~~-----~~~~~~~~~~ 74 (126)
T 1x5e_A 5 SSGNVRVITDENWRELLEG--DWMIEFYA--PWCPACQNLQPEWESFAEWGED-LEVNIAKVDVT-----EQPGLSGRFI 74 (126)
T ss_dssp CCCSEEECCTTTHHHHTSS--EEEEEEEC--SSCHHHHHHHHHHHHHHHHHGG-GTCEEEEEETT-----TCHHHHHHTT
T ss_pred CCCccEEecHHHHHHHhCC--CEEEEEEC--CCCHHHHHHhHHHHHHHHHhcc-CCeEEEEEECc-----CCHHHHHHcC
Confidence 4567999999999998854 39999999 999999 999999998853 47999999997 7899999999
Q ss_pred cc-CceEEEec
Q psy3889 95 LT-PQLLWAFC 104 (243)
Q Consensus 95 V~-~PTi~lF~ 104 (243)
|. +||+++|+
T Consensus 75 v~~~Pt~~~~~ 85 (126)
T 1x5e_A 75 INALPTIYHCK 85 (126)
T ss_dssp CCSSSEEEEEE
T ss_pred CcccCEEEEEe
Confidence 99 99999997
No 45
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=99.61 E-value=7.4e-16 Score=118.15 Aligned_cols=84 Identities=11% Similarity=0.113 Sum_probs=72.2
Q ss_pred hhcCCCceEcChhhHHHHhc--cCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHH
Q psy3889 17 LVLSKGHVSLDTHNFDKILS--KFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLA 90 (243)
Q Consensus 17 ~~~~~~v~~L~~~nF~~~v~--~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~ 90 (243)
+...+.++.+++++|++.+. ++++++|.||+ |||++| |.|+++++.+. ++.++.||+++ ++++++
T Consensus 14 ~~~~~~v~~l~~~~~~~~~~~~~~~~~vv~f~a--~wC~~C~~~~~~l~~~~~~~~---~~~~~~vd~~~----~~~~~~ 84 (124)
T 1faa_A 14 EAIVGKVTEVNKDTFWPIVKAAGDKPVVLDMFT--QWCGPCKAMAPKYEKLAEEYL---DVIFLKLDCNQ----ENKTLA 84 (124)
T ss_dssp HTTTTSEEEECTTTHHHHHHHTTTSCEEEEEEC--TTCHHHHHHHHHHHHHHHHCT---TSEEEEEECSS----TTHHHH
T ss_pred hhcCCceEEecchhHHHHHHhcCCCEEEEEEEC--CcCHhHHHHhHHHHHHHHHCC---CCEEEEEecCc----chHHHH
Confidence 35567899999999999884 68899999999 999999 99999998874 59999999962 578999
Q ss_pred hhcCcc-CceEEEeccchHh
Q psy3889 91 KRGCLT-PQLLWAFCVADSL 109 (243)
Q Consensus 91 ~~~~V~-~PTi~lF~~~~~l 109 (243)
++|+|+ +||+++|+++.-+
T Consensus 85 ~~~~v~~~Pt~~~~~~G~~~ 104 (124)
T 1faa_A 85 KELGIRVVPTFKILKENSVV 104 (124)
T ss_dssp HHHCCSSSSEEEEEETTEEE
T ss_pred HHcCCCeeeEEEEEeCCcEE
Confidence 999999 9999999754433
No 46
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.61 E-value=1.1e-15 Score=144.15 Aligned_cols=78 Identities=19% Similarity=0.317 Sum_probs=72.0
Q ss_pred cCCCceEcChhhHHHHhccCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhcC
Q psy3889 19 LSKGHVSLDTHNFDKILSKFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRGC 94 (243)
Q Consensus 19 ~~~~v~~L~~~nF~~~v~~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~~ 94 (243)
..+.|++|++.||++++.++++++|.||| |||+|| |.|+++|+.+.+. ++.+++|||+ .++++|++|+
T Consensus 12 ~~~~v~~l~~~~f~~~~~~~~~~lv~F~a--~wC~~C~~~~p~~~~~a~~~~~~-~v~~~~vd~~-----~~~~l~~~~~ 83 (504)
T 2b5e_A 12 EDSAVVKLATDSFNEYIQSHDLVLAEFFA--PWCGHCKNMAPEYVKAAETLVEK-NITLAQIDCT-----ENQDLCMEHN 83 (504)
T ss_dssp TTSSCEECCTTTHHHHHTTCSEEEEEEEC--TTCHHHHHHHHHHHHHHHHTTTT-TCEEEEEETT-----TCHHHHHHTT
T ss_pred CCCCcEECCHHHHHHHHhcCCeEEEEEEC--CCCHHHHHhHHHHHHHHHHhccC-CeEEEEEECC-----CCHHHHHhcC
Confidence 34679999999999999889999999999 999999 9999999998643 6999999998 7899999999
Q ss_pred cc-CceEEEec
Q psy3889 95 LT-PQLLWAFC 104 (243)
Q Consensus 95 V~-~PTi~lF~ 104 (243)
|+ |||+++|+
T Consensus 84 v~~~Pt~~~~~ 94 (504)
T 2b5e_A 84 IPGFPSLKIFK 94 (504)
T ss_dssp CCSSSEEEEEE
T ss_pred CCcCCEEEEEe
Confidence 99 99999997
No 47
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=99.61 E-value=2.5e-15 Score=133.88 Aligned_cols=82 Identities=22% Similarity=0.216 Sum_probs=72.2
Q ss_pred hhcCCCceEcChhhHHHHh-ccCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHh
Q psy3889 17 LVLSKGHVSLDTHNFDKIL-SKFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAK 91 (243)
Q Consensus 17 ~~~~~~v~~L~~~nF~~~v-~~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~ 91 (243)
....+.|++|+.+||++.+ +.+++|+|.||| |||++| |.|+++++.+.+ .+.++.|||+ ...+.++|+
T Consensus 13 ~~~~~~vv~lt~~~f~~~i~~~~~~vlV~F~A--~wC~~C~~~~p~~~~la~~~~~--~~~~~~v~~d---~~~~~~l~~ 85 (298)
T 3ed3_A 13 YDSDPHISELTPKSFDKAIHNTNYTSLVEFYA--PWCGHCKKLSSTFRKAAKRLDG--VVQVAAVNCD---LNKNKALCA 85 (298)
T ss_dssp CSSCTTCEECCHHHHHHHHTSSSSCEEEEEEC--TTCHHHHHHHHHHHHHHHHTTT--TSEEEEEETT---STTTHHHHH
T ss_pred CCCCCCeEEeCHHHHHHHHHhCCCeEEEEEEC--CCCHHHHHHHHHHHHHHHHccC--CcEEEEEEcc---CccCHHHHH
Confidence 3456689999999999999 678899999999 999999 999999999854 5899999996 235799999
Q ss_pred hcCcc-CceEEEecc
Q psy3889 92 RGCLT-PQLLWAFCV 105 (243)
Q Consensus 92 ~~~V~-~PTi~lF~~ 105 (243)
+|+|. +||+++|++
T Consensus 86 ~~~I~~~Pt~~~~~~ 100 (298)
T 3ed3_A 86 KYDVNGFPTLMVFRP 100 (298)
T ss_dssp HTTCCBSSEEEEEEC
T ss_pred hCCCCccceEEEEEC
Confidence 99999 999999973
No 48
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=99.60 E-value=1.1e-15 Score=122.36 Aligned_cols=82 Identities=11% Similarity=0.096 Sum_probs=58.7
Q ss_pred CceEcChhhHHHHhccCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcE--EEEEecccCCCcccHHHHhhcCc
Q psy3889 22 GHVSLDTHNFDKILSKFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFL--VAEVGVKDYGERDNEDLAKRGCL 95 (243)
Q Consensus 22 ~v~~L~~~nF~~~v~~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~--vakVd~~d~~~~~n~~l~~~~~V 95 (243)
++..++.++|++.+.+++.++|.|++.|+||++| |.|+++++.+ + ++. |++||++ ++++++.+|+|
T Consensus 18 ~~~~l~~~~f~~~i~~~~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~-~--~v~~~~~~Vd~d-----~~~~la~~~~V 89 (142)
T 2es7_A 18 GWQPVEASTVDDWIKRVGDGVILLSSDPRRTPEVSDNPVMIAELLREF-P--QFDWQVAVADLE-----QSEAIGDRFNV 89 (142)
T ss_dssp TCEECCCC--------CCSEEEEECCCSCC----CCHHHHHHHHHHTC-T--TSCCEEEEECHH-----HHHHHHHTTTC
T ss_pred cCcccccccHHHHHHhCCCEEEEEECCCCCCccHHHHHHHHHHHHHHh-c--ccceeEEEEECC-----CCHHHHHhcCC
Confidence 7899999999999977778999999855569999 9999999988 3 688 9999998 88999999999
Q ss_pred c-CceEEEeccchHhhh
Q psy3889 96 T-PQLLWAFCVADSLNK 111 (243)
Q Consensus 96 ~-~PTi~lF~~~~~l~~ 111 (243)
+ +||+++|+++..+..
T Consensus 90 ~~iPT~~~fk~G~~v~~ 106 (142)
T 2es7_A 90 RRFPATLVFTDGKLRGA 106 (142)
T ss_dssp CSSSEEEEESCC----C
T ss_pred CcCCeEEEEeCCEEEEE
Confidence 9 999999987655544
No 49
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=99.60 E-value=2.9e-15 Score=110.67 Aligned_cols=76 Identities=11% Similarity=0.150 Sum_probs=67.7
Q ss_pred ceEcChhhHHHHh-ccCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhcCcc-
Q psy3889 23 HVSLDTHNFDKIL-SKFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRGCLT- 96 (243)
Q Consensus 23 v~~L~~~nF~~~v-~~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~~V~- 96 (243)
|.++++++|++.+ .++++++|.||+ |||++| |.++++++.+.+ ++.++.||++ .+++++++|+|.
T Consensus 2 v~~~~~~~~~~~~~~~~~~~~v~f~~--~~C~~C~~~~~~~~~~~~~~~~--~~~~~~v~~~-----~~~~~~~~~~v~~ 72 (105)
T 1fb6_A 2 VQDVNDSSWKEFVLESEVPVMVDFWA--PWCGPCKLIAPVIDELAKEYSG--KIAVYKLNTD-----EAPGIATQYNIRS 72 (105)
T ss_dssp CEECCTTTHHHHTTTCSSCEEEEEEC--TTCHHHHHHHHHHHHHHHHTTT--TCEEEEEETT-----TCHHHHHHTTCCS
T ss_pred ceechhhhHHHHHhcCCCcEEEEEEC--CCChHHHHHHHHHHHHHHHhcC--ceEEEEEcCc-----chHHHHHhCCCCc
Confidence 6789999999977 678899999999 999999 899999998853 6999999997 789999999999
Q ss_pred CceEEEeccch
Q psy3889 97 PQLLWAFCVAD 107 (243)
Q Consensus 97 ~PTi~lF~~~~ 107 (243)
+||+++|+++.
T Consensus 73 ~Pt~~~~~~g~ 83 (105)
T 1fb6_A 73 IPTVLFFKNGE 83 (105)
T ss_dssp SSEEEEEETTE
T ss_pred ccEEEEEeCCe
Confidence 99999997443
No 50
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=99.60 E-value=3.3e-16 Score=117.11 Aligned_cols=71 Identities=11% Similarity=0.050 Sum_probs=53.2
Q ss_pred ChhhHHHHhccCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhcCcc-CceEE
Q psy3889 27 DTHNFDKILSKFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRGCLT-PQLLW 101 (243)
Q Consensus 27 ~~~nF~~~v~~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~~V~-~PTi~ 101 (243)
+.++|++.++++++++|.||+ |||++| |.|+++++.+ +++.+++||++ ++++++++|+|+ +||++
T Consensus 7 ~~~~~~~~~~~~~~vlv~f~a--~wC~~C~~~~p~~~~~~~~~---~~~~~~~vd~~-----~~~~l~~~~~v~~~Pt~~ 76 (105)
T 4euy_A 7 TIEELATYIEEQQLVLLFIKT--ENCGVCDVMLRKVNYVLENY---NYVEKIEILLQ-----DMQEIAGRYAVFTGPTVL 76 (105)
T ss_dssp ---CCSSSTTCSSEEEEEEEE--SSCHHHHHHHHHHHHHHHTC---TTEEEEEEEEC-----CC---------CCCCEEE
T ss_pred CHHHHHHHHhcCCCEEEEEeC--CCCcchHHHHHHHHHHHHHc---CCceEEEEECC-----CCHHHHHhcCCCCCCEEE
Confidence 467898888888999999999 999999 9999999987 37999999997 789999999999 99999
Q ss_pred Eeccch
Q psy3889 102 AFCVAD 107 (243)
Q Consensus 102 lF~~~~ 107 (243)
+|+++.
T Consensus 77 ~~~~G~ 82 (105)
T 4euy_A 77 LFYNGK 82 (105)
T ss_dssp EEETTE
T ss_pred EEeCCe
Confidence 998443
No 51
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.60 E-value=1.4e-15 Score=142.37 Aligned_cols=89 Identities=20% Similarity=0.231 Sum_probs=79.0
Q ss_pred CCceEcChhhHHHHhccC---CeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhc
Q psy3889 21 KGHVSLDTHNFDKILSKF---HTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRG 93 (243)
Q Consensus 21 ~~v~~L~~~nF~~~v~~~---k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~ 93 (243)
+.|++||++||++.+.++ ++++|.||| |||+|| |.|+++|+.+.+ .+.+++|||+ .++++|++|
T Consensus 1 s~v~~l~~~~f~~~i~~~~~~~~~lv~F~a--~wC~~C~~~~p~~~~~a~~~~~--~v~~~~vd~~-----~~~~l~~~~ 71 (481)
T 3f8u_A 1 SDVLELTDDNFESRISDTGSAGLMLVEFFA--PWCGHAKRLAPEYEAAATRLKG--IVPLAKVDCT-----ANTNTCNKY 71 (481)
T ss_dssp CCCEEECTTTHHHHTTCCSSSSEEEEEEEC--TTCHHHHHHHHHHHHHHHHTTT--TCCEEEEETT-----TCHHHHHHT
T ss_pred CceEEecHHHHHHHHHhCCCCCeEEEEEEC--CCCHHHHHhHHHHHHHHHHhcC--ceEEEEEECC-----CCHHHHHhc
Confidence 368999999999999666 899999999 999999 999999999964 4999999998 789999999
Q ss_pred Ccc-CceEEEec------------cchHhhhhhhHHHHhhhhcc
Q psy3889 94 CLT-PQLLWAFC------------VADSLNKTLFILIIFFSSIG 124 (243)
Q Consensus 94 ~V~-~PTi~lF~------------~~~~l~~~~f~~~~i~~~~g 124 (243)
+|+ +||+++|+ +.++|++ | +.+..+
T Consensus 72 ~v~~~Ptl~~~~~g~~~~~~~G~~~~~~l~~--~----~~~~~~ 109 (481)
T 3f8u_A 72 GVSGYPTLKIFRDGEEAGAYDGPRTADGIVS--H----LKKQAG 109 (481)
T ss_dssp TCCEESEEEEEETTEEEEECCSCSSHHHHHH--H----HHHHTS
T ss_pred CCCCCCEEEEEeCCceeeeecCccCHHHHHH--H----HHhhcc
Confidence 999 99999998 6778888 8 555544
No 52
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=99.60 E-value=1.2e-15 Score=118.34 Aligned_cols=78 Identities=19% Similarity=0.198 Sum_probs=64.4
Q ss_pred CCCceEcChhhHHHHh-ccCCeEEEEEEecCCCCC--------------Cc----HHHHHHHHHccCCCCcEEEEEeccc
Q psy3889 20 SKGHVSLDTHNFDKIL-SKFHTTLVKFDIAYPYGA--------------KH----EAFLEVAESSKHQPDFLVAEVGVKD 80 (243)
Q Consensus 20 ~~~v~~L~~~nF~~~v-~~~k~vlV~FyA~~pWC~--------------~c----p~~~~lA~~~~~~~~v~vakVd~~d 80 (243)
++.+++|+.++|++.+ +++++++|.||+ |||+ +| |.|+++++.+++ ++.+++||++
T Consensus 2 ~~~v~~l~~~~f~~~~~~~~k~vlv~F~a--~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~--~~~~~~vd~d- 76 (123)
T 1oaz_A 2 SDKIIHLTDDSFDTDVLKADGAILVDFWA--EWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQG--KLTVAKLNID- 76 (123)
T ss_dssp CCSCEECCSTTHHHHTTSCSSEEEEEEEC--SSCSCBSSSTTSCCSCCCCCCTTHHHHTTC---------CEEEEEETT-
T ss_pred CCccEecChhhHHHHHHhCCCeEEEEEEC--CCCccccccccccccCCCCcHHHHHHHHHHHHHhcC--CeEEEEEECC-
Confidence 3568999999999765 788999999999 9999 99 999999988754 6999999998
Q ss_pred CCCcccHHHHhhcCcc-CceEEEeccc
Q psy3889 81 YGERDNEDLAKRGCLT-PQLLWAFCVA 106 (243)
Q Consensus 81 ~~~~~n~~l~~~~~V~-~PTi~lF~~~ 106 (243)
.+++++++|+|+ +||+++|+++
T Consensus 77 ----~~~~l~~~~~v~~~Pt~~~~~~G 99 (123)
T 1oaz_A 77 ----QNPGTAPKYGIRGIPTLLLFKNG 99 (123)
T ss_dssp ----SCTTTGGGGTCCBSSEEEEEESS
T ss_pred ----CCHHHHHHcCCCccCEEEEEECC
Confidence 788999999999 9999999743
No 53
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=99.60 E-value=3e-15 Score=112.24 Aligned_cols=79 Identities=13% Similarity=0.183 Sum_probs=68.8
Q ss_pred CCceEc-ChhhHHHHhcc----CCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHh
Q psy3889 21 KGHVSL-DTHNFDKILSK----FHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAK 91 (243)
Q Consensus 21 ~~v~~L-~~~nF~~~v~~----~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~ 91 (243)
+.++.+ +.++|++.+.. +++++|.||+ |||++| |.|+++++.+.+ ++.++.||++ .++++++
T Consensus 2 ~~v~~i~~~~~~~~~l~~~~~~~~~~vv~f~~--~~C~~C~~~~~~l~~~~~~~~~--~~~~~~vd~~-----~~~~~~~ 72 (112)
T 1ep7_A 2 GSVIVIDSKAAWDAQLAKGKEEHKPIVVDFTA--TWCGPCKMIAPLFETLSNDYAG--KVIFLKVDVD-----AVAAVAE 72 (112)
T ss_dssp CSEEEECSHHHHHHHHHHHHHHTCCEEEEEEC--TTCHHHHHHHHHHHHHHHHTTT--TSEEEEEETT-----TTHHHHH
T ss_pred CcEEEecCHHHHHHHHHhhcccCCeEEEEEEC--CCCHHHHHHHHHHHHHHHHcCC--CeEEEEEECC-----chHHHHH
Confidence 357788 57999999854 8999999999 999999 999999998853 7999999997 7899999
Q ss_pred hcCcc-CceEEEeccchH
Q psy3889 92 RGCLT-PQLLWAFCVADS 108 (243)
Q Consensus 92 ~~~V~-~PTi~lF~~~~~ 108 (243)
+|+|. +||+++|+++.-
T Consensus 73 ~~~v~~~Pt~~~~~~G~~ 90 (112)
T 1ep7_A 73 AAGITAMPTFHVYKDGVK 90 (112)
T ss_dssp HHTCCBSSEEEEEETTEE
T ss_pred HcCCCcccEEEEEECCeE
Confidence 99999 999999975443
No 54
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=99.60 E-value=2.9e-15 Score=113.77 Aligned_cols=77 Identities=19% Similarity=0.209 Sum_probs=68.8
Q ss_pred cCCCceEcChhhHHHHh-ccCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhc
Q psy3889 19 LSKGHVSLDTHNFDKIL-SKFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRG 93 (243)
Q Consensus 19 ~~~~v~~L~~~nF~~~v-~~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~ 93 (243)
..+.++.++..+|++.+ .++++++|.||+ |||++| |.|+++++.+.+ ++.++.||++ .+++++++|
T Consensus 10 ~~~~v~~l~~~~~~~~~~~~~~~~lv~f~~--~~C~~C~~~~~~~~~~~~~~~~--~~~~~~v~~~-----~~~~~~~~~ 80 (121)
T 2i1u_A 10 EKSATIKVTDASFATDVLSSNKPVLVDFWA--TWCGPCKMVAPVLEEIATERAT--DLTVAKLDVD-----TNPETARNF 80 (121)
T ss_dssp --CCSEECCTTTHHHHTTTCSSCEEEEEEC--TTCHHHHHHHHHHHHHHHHTTT--TCEEEEEETT-----TCHHHHHHT
T ss_pred hcccceecCHHHHHHHHHhCCCcEEEEEEC--CCCHHHHHHHHHHHHHHHHhcC--CeEEEEEECC-----CCHHHHHhc
Confidence 45679999999999866 778899999999 999999 999999998853 6999999997 789999999
Q ss_pred Ccc-CceEEEec
Q psy3889 94 CLT-PQLLWAFC 104 (243)
Q Consensus 94 ~V~-~PTi~lF~ 104 (243)
+|. +||+++|+
T Consensus 81 ~i~~~Pt~~~~~ 92 (121)
T 2i1u_A 81 QVVSIPTLILFK 92 (121)
T ss_dssp TCCSSSEEEEEE
T ss_pred CCCcCCEEEEEE
Confidence 999 99999997
No 55
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=99.60 E-value=2.9e-15 Score=128.58 Aligned_cols=80 Identities=15% Similarity=0.177 Sum_probs=71.3
Q ss_pred CCCceEcChhhHHHHh-ccCCeEEEEEEecCCCCCCc----HHHHHHHHHccC-CCCcEEEEEecccCCCcccHHHHhhc
Q psy3889 20 SKGHVSLDTHNFDKIL-SKFHTTLVKFDIAYPYGAKH----EAFLEVAESSKH-QPDFLVAEVGVKDYGERDNEDLAKRG 93 (243)
Q Consensus 20 ~~~v~~L~~~nF~~~v-~~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~-~~~v~vakVd~~d~~~~~n~~l~~~~ 93 (243)
...+.+|++.+|++.+ +++++++|.||| |||++| |.|+++++.+.+ ..++.+++|||+ ...++++|++|
T Consensus 11 ~~~v~~l~~~~f~~~i~~~~~~vlv~F~a--~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~---~~~~~~l~~~~ 85 (244)
T 3q6o_A 11 SDPLTLLQADTVRGAVLGSRSAWAVEFFA--SWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCA---EETNSAVCRDF 85 (244)
T ss_dssp TSSSEEECTTTHHHHHSSCSSEEEEEEEC--TTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETT---STTTHHHHHHT
T ss_pred CCCceeCChhhHHHHHhhCCCeEEEEEEC--CcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCC---chhhHHHHHHc
Confidence 4579999999999988 667999999999 999999 999999999864 347999999994 12689999999
Q ss_pred Ccc-CceEEEec
Q psy3889 94 CLT-PQLLWAFC 104 (243)
Q Consensus 94 ~V~-~PTi~lF~ 104 (243)
+|+ +||+++|.
T Consensus 86 ~v~~~Pt~~~~~ 97 (244)
T 3q6o_A 86 NIPGFPTVRFFX 97 (244)
T ss_dssp TCCSSSEEEEEC
T ss_pred CCCccCEEEEEe
Confidence 999 99999998
No 56
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=99.59 E-value=3.4e-15 Score=112.70 Aligned_cols=82 Identities=13% Similarity=0.123 Sum_probs=71.0
Q ss_pred CCCceEcChhhHHHHhccCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhcCc
Q psy3889 20 SKGHVSLDTHNFDKILSKFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRGCL 95 (243)
Q Consensus 20 ~~~v~~L~~~nF~~~v~~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~~V 95 (243)
+......+.++|++.+.++++++|.||+ |||++| |.|+++++.+. ++.++.||++ .+++++++|+|
T Consensus 6 ~~~~~~~~~~~f~~~~~~~k~vlv~f~a--~wC~~C~~~~p~l~~l~~~~~---~~~~~~vd~~-----~~~~l~~~~~v 75 (109)
T 3f3q_A 6 HMVTQFKTASEFDSAIAQDKLVVVDFYA--TWCGPCKMIAPMIEKFSEQYP---QADFYKLDVD-----ELGDVAQKNEV 75 (109)
T ss_dssp CCCEECCSHHHHHHHTTSSSCEEEEEEC--TTCHHHHHHHHHHHHHHHHCT---TSEEEEEETT-----TCHHHHHHTTC
T ss_pred ccccCCCCHHHHHHHHhcCCEEEEEEEC--CcCHhHHHHHHHHHHHHHHCC---CCEEEEEECC-----CCHHHHHHcCC
Confidence 3445677899999999889999999999 999999 99999999874 5999999997 78999999999
Q ss_pred c-CceEEEeccchHhhh
Q psy3889 96 T-PQLLWAFCVADSLNK 111 (243)
Q Consensus 96 ~-~PTi~lF~~~~~l~~ 111 (243)
+ +||+++|.++..+..
T Consensus 76 ~~~Pt~~~~~~G~~~~~ 92 (109)
T 3f3q_A 76 SAMPTLLLFKNGKEVAK 92 (109)
T ss_dssp CSSSEEEEEETTEEEEE
T ss_pred CccCEEEEEECCEEEEE
Confidence 9 999999985443333
No 57
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=99.59 E-value=5.4e-15 Score=112.79 Aligned_cols=84 Identities=10% Similarity=0.096 Sum_probs=69.8
Q ss_pred hhhcCCCceEcChhhHHHHh-c---cCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccH
Q psy3889 16 DLVLSKGHVSLDTHNFDKIL-S---KFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNE 87 (243)
Q Consensus 16 ~~~~~~~v~~L~~~nF~~~v-~---~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~ 87 (243)
.+.....+..++.++|++.+ . ++++++|.||+ |||++| |.|+++++.+. ++.++.||++ +++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~f~~--~~C~~C~~~~~~l~~~~~~~~---~~~~~~vd~~-----~~~ 77 (122)
T 2vlu_A 8 AAVAAEVISVHSLEQWTMQIEEANTAKKLVVIDFTA--SWCGPCRIMAPVFADLAKKFP---NAVFLKVDVD-----ELK 77 (122)
T ss_dssp ----CCCEEECSHHHHHHHHHHHHHTTCCEEEEEEC--TTCHHHHHHHHHHHHHHHHCT---TSEEEEEETT-----TCH
T ss_pred cCCCCcceeccCHHHHHHHHHHhhccCCEEEEEEEC--CCCHHHHHHHHHHHHHHHHCC---CcEEEEEECC-----CCH
Confidence 34455667888999999988 3 58899999999 999999 99999998875 3999999997 789
Q ss_pred HHHhhcCcc-CceEEEeccchHh
Q psy3889 88 DLAKRGCLT-PQLLWAFCVADSL 109 (243)
Q Consensus 88 ~l~~~~~V~-~PTi~lF~~~~~l 109 (243)
+++++|+|. +||+++|+++..+
T Consensus 78 ~~~~~~~v~~~Pt~~~~~~G~~~ 100 (122)
T 2vlu_A 78 PIAEQFSVEAMPTFLFMKEGDVK 100 (122)
T ss_dssp HHHHHTTCCSSSEEEEEETTEEE
T ss_pred HHHHHcCCCcccEEEEEeCCEEE
Confidence 999999999 9999999754433
No 58
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=99.58 E-value=4.3e-15 Score=112.23 Aligned_cols=81 Identities=12% Similarity=0.180 Sum_probs=70.1
Q ss_pred hhcCCCceEcChhhHHHHhccCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhh
Q psy3889 17 LVLSKGHVSLDTHNFDKILSKFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKR 92 (243)
Q Consensus 17 ~~~~~~v~~L~~~nF~~~v~~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~ 92 (243)
+.+++....++..+|++.++++++++|.||+ |||++| |.|+++++.+. ++.++.||++ .+.+++++
T Consensus 5 ~~~~~~~~~~~~~~f~~~~~~~k~vlv~f~a--~~C~~C~~~~~~l~~l~~~~~---~v~~~~vd~~-----~~~~~~~~ 74 (112)
T 1syr_A 5 HHHHMVKIVTSQAEFDSIISQNELVIVDFFA--EWCGPCKRIAPFYEECSKTYT---KMVFIKVDVD-----EVSEVTEK 74 (112)
T ss_dssp ----CCEEECSHHHHHHHHHHCSEEEEEEEC--TTCHHHHHHHHHHHHHHHHCT---TSEEEEEETT-----TTHHHHHH
T ss_pred ccceeEEEECCHHHHHHHHccCCeEEEEEEC--CCCHHHHHHHHHHHHHHHHcC---CCEEEEEECC-----CCHHHHHH
Confidence 3456778999999999999888999999999 999999 99999998874 5999999997 78899999
Q ss_pred cCcc-CceEEEeccch
Q psy3889 93 GCLT-PQLLWAFCVAD 107 (243)
Q Consensus 93 ~~V~-~PTi~lF~~~~ 107 (243)
|+|. +||+++|+++.
T Consensus 75 ~~v~~~Pt~~~~~~G~ 90 (112)
T 1syr_A 75 ENITSMPTFKVYKNGS 90 (112)
T ss_dssp TTCCSSSEEEEEETTE
T ss_pred cCCCcccEEEEEECCc
Confidence 9999 99999997543
No 59
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.58 E-value=3.5e-15 Score=126.31 Aligned_cols=89 Identities=19% Similarity=0.273 Sum_probs=78.6
Q ss_pred cCCCceEcChhhHHHHhccCCeEEEEEEecCCCCCCc----HHHHHHHHHccC-CCCcEEEEEecccCCCcccHHHHhhc
Q psy3889 19 LSKGHVSLDTHNFDKILSKFHTTLVKFDIAYPYGAKH----EAFLEVAESSKH-QPDFLVAEVGVKDYGERDNEDLAKRG 93 (243)
Q Consensus 19 ~~~~v~~L~~~nF~~~v~~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~-~~~v~vakVd~~d~~~~~n~~l~~~~ 93 (243)
..+.++.|++.+|++.+.++++++|.||| |||++| |.|+++++.+++ ..++.++.||++ .+++++++|
T Consensus 13 ~~~~v~~l~~~~~~~~~~~~~~v~v~F~a--~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~~-----~~~~l~~~~ 85 (241)
T 3idv_A 13 EENGVLVLNDANFDNFVADKDTVLLEFYA--PWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDAT-----SASVLASRF 85 (241)
T ss_dssp EETTEEEECTTTHHHHHTTCSEEEEEEEC--TTCHHHHHHHHHHHHHHHHHHTSSSCCCEEEEETT-----TCHHHHHHT
T ss_pred cCCCcEEecccCHHHHHhcCCeEEEEEEC--CCCHHHHHhhHHHHHHHHHHhhcCCceEEEEEecc-----CCHHHHHhc
Confidence 34679999999999999889999999999 999999 999999999864 345999999997 789999999
Q ss_pred Ccc-CceEEEec-----------cchHhhhhhhHH
Q psy3889 94 CLT-PQLLWAFC-----------VADSLNKTLFIL 116 (243)
Q Consensus 94 ~V~-~PTi~lF~-----------~~~~l~~~~f~~ 116 (243)
+|+ +||+++|+ +.++|.+ |+.
T Consensus 86 ~v~~~Pt~~~~~~g~~~~~~g~~~~~~l~~--~i~ 118 (241)
T 3idv_A 86 DVSGYPTIKILKKGQAVDYEGSRTQEEIVA--KVR 118 (241)
T ss_dssp TCCSSSEEEEEETTEEEECCSCSCHHHHHH--HHH
T ss_pred CCCcCCEEEEEcCCCcccccCcccHHHHHH--HHh
Confidence 999 99999997 5677777 733
No 60
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.58 E-value=4.8e-15 Score=124.66 Aligned_cols=79 Identities=16% Similarity=0.186 Sum_probs=71.6
Q ss_pred cCCCceEcChhhHHHHhccCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhcC
Q psy3889 19 LSKGHVSLDTHNFDKILSKFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRGC 94 (243)
Q Consensus 19 ~~~~v~~L~~~nF~~~v~~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~~ 94 (243)
....++.++..+|+..+.++++++|.||+ |||++| |.|+++++.+.+ ++.++.||++ .+++++++|+
T Consensus 95 ~~~~v~~l~~~~f~~~~~~~~~vlv~F~a--~wC~~C~~~~p~~~~l~~~~~~--~v~~~~vd~~-----~~~~l~~~~~ 165 (210)
T 3apq_A 95 DDPEIITLERREFDAAVNSGELWFVNFYS--PGCSHCHDLAPTWREFAKEVDG--LLRIGAVNCG-----DDRMLCRMKG 165 (210)
T ss_dssp TCTTSEECCHHHHHHHHHHSCCEEEEEEC--TTCHHHHHHHHHHHHHHHHTBT--TBEEEEEETT-----TCHHHHHHTT
T ss_pred CCCceEEecHHHHHHHHccCCcEEEEEeC--CCChhHHHHHHHHHHHHHHhcC--ceEEEEEECC-----ccHHHHHHcC
Confidence 34568999999999999888999999999 999999 999999999854 6999999997 7899999999
Q ss_pred cc-CceEEEeccc
Q psy3889 95 LT-PQLLWAFCVA 106 (243)
Q Consensus 95 V~-~PTi~lF~~~ 106 (243)
|. +||+++|+++
T Consensus 166 v~~~Pt~~~~~~G 178 (210)
T 3apq_A 166 VNSYPSLFIFRSG 178 (210)
T ss_dssp CCSSSEEEEECTT
T ss_pred CCcCCeEEEEECC
Confidence 99 9999999743
No 61
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=99.58 E-value=2.2e-15 Score=114.71 Aligned_cols=78 Identities=12% Similarity=0.222 Sum_probs=67.0
Q ss_pred cCCCceEcChhhHHHHh-ccCCeEEEEEEecCCCCCCc----HHHHHHHHHccC---CCCcEEEEEecccCCCcccHHHH
Q psy3889 19 LSKGHVSLDTHNFDKIL-SKFHTTLVKFDIAYPYGAKH----EAFLEVAESSKH---QPDFLVAEVGVKDYGERDNEDLA 90 (243)
Q Consensus 19 ~~~~v~~L~~~nF~~~v-~~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~---~~~v~vakVd~~d~~~~~n~~l~ 90 (243)
....+.+|+.++|++.+ .++++++|.||+ |||++| |.|+++++.+.+ ..++.+++||++ .+. ++
T Consensus 5 ~~~~v~~l~~~~f~~~v~~~~~~vlv~f~a--~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~-----~~~-~~ 76 (121)
T 2djj_A 5 SEGPVTVVVAKNYNEIVLDDTKDVLIEFYA--PWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDAT-----AND-VP 76 (121)
T ss_dssp CSCSSEECCTTTTTTSSSCTTSCEEEEEEC--SSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETT-----TSC-CS
T ss_pred CCCCeEEecccCHHHHhhcCCCCEEEEEEC--CCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECc-----ccc-cc
Confidence 45679999999999987 788999999999 999999 999999999864 347999999997 333 56
Q ss_pred hhcCcc-CceEEEeccc
Q psy3889 91 KRGCLT-PQLLWAFCVA 106 (243)
Q Consensus 91 ~~~~V~-~PTi~lF~~~ 106 (243)
+ +|+ +||+++|.+.
T Consensus 77 ~--~v~~~Pt~~~~~~~ 91 (121)
T 2djj_A 77 D--EIQGFPTIKLYPAG 91 (121)
T ss_dssp S--CCSSSSEEEEECSS
T ss_pred c--ccCcCCeEEEEeCc
Confidence 5 999 9999999854
No 62
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=99.57 E-value=6.2e-15 Score=118.06 Aligned_cols=77 Identities=13% Similarity=0.220 Sum_probs=67.5
Q ss_pred hcCCCceEcC-hhhHHHHhcc--CCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHH
Q psy3889 18 VLSKGHVSLD-THNFDKILSK--FHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLA 90 (243)
Q Consensus 18 ~~~~~v~~L~-~~nF~~~v~~--~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~ 90 (243)
.....++.++ .++|++++.. +++++|.||+ |||++| |.|+++++.+ +++.+++||++ ++++++
T Consensus 9 ~~~~~v~~l~~~~~~~~~~~~~~~~~vvv~F~a--~wC~~C~~~~p~l~~l~~~~---~~v~~~~vd~~-----~~~~l~ 78 (153)
T 2wz9_A 9 AAVAAVEEVGSAGQFEELLRLKAKSLLVVHFWA--PWAPQCAQMNEVMAELAKEL---PQVSFVKLEAE-----GVPEVS 78 (153)
T ss_dssp ---CCSEEECSHHHHHHHHHHTTTSCEEEEEEC--TTCHHHHHHHHHHHHHHHHC---TTSEEEEEETT-----TSHHHH
T ss_pred cccCCeEEcCCHHHHHHHHHhcCCCeEEEEEEC--CCCHhHHHHHHHHHHHHHHc---CCeEEEEEECC-----CCHHHH
Confidence 3456788887 6999999965 8999999999 999999 9999999887 37999999997 789999
Q ss_pred hhcCcc-CceEEEec
Q psy3889 91 KRGCLT-PQLLWAFC 104 (243)
Q Consensus 91 ~~~~V~-~PTi~lF~ 104 (243)
++|+|. +||+++|.
T Consensus 79 ~~~~v~~~Pt~~~~~ 93 (153)
T 2wz9_A 79 EKYEISSVPTFLFFK 93 (153)
T ss_dssp HHTTCCSSSEEEEEE
T ss_pred HHcCCCCCCEEEEEE
Confidence 999999 99999997
No 63
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=99.57 E-value=5e-15 Score=112.52 Aligned_cols=78 Identities=18% Similarity=0.242 Sum_probs=68.3
Q ss_pred CCCceEcCh-hhHHHHhc--cCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhh
Q psy3889 20 SKGHVSLDT-HNFDKILS--KFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKR 92 (243)
Q Consensus 20 ~~~v~~L~~-~nF~~~v~--~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~ 92 (243)
.+.++++++ ++|++.+. ++++++|.||+ |||++| |.|+++++.+ ++.++.||++ .+++++++
T Consensus 12 m~~v~~l~~~~~~~~~l~~~~~~~~vv~f~a--~wC~~C~~~~~~~~~~~~~~----~~~~~~vd~~-----~~~~~~~~ 80 (117)
T 2xc2_A 12 MSELIELKQDGDLESLLEQHKNKLVVVDFFA--TWCGPCKTIAPLFKELSEKY----DAIFVKVDVD-----KLEETARK 80 (117)
T ss_dssp CCEEEECCSTTHHHHHHHHTTTSCEEEEEEC--TTCHHHHHHHHHHHHHHTTS----SSEEEEEETT-----TSHHHHHH
T ss_pred hheeEEeCCHHHHHHHHHhCCCCEEEEEEEC--CCCHhHHHHhHHHHHHHHHc----CcEEEEEECC-----ccHHHHHH
Confidence 344889998 99999995 78999999999 999999 8888888766 6999999997 78999999
Q ss_pred cCcc-CceEEEeccchH
Q psy3889 93 GCLT-PQLLWAFCVADS 108 (243)
Q Consensus 93 ~~V~-~PTi~lF~~~~~ 108 (243)
|+|. +||+++|+++..
T Consensus 81 ~~v~~~Pt~~~~~~G~~ 97 (117)
T 2xc2_A 81 YNISAMPTFIAIKNGEK 97 (117)
T ss_dssp TTCCSSSEEEEEETTEE
T ss_pred cCCCccceEEEEeCCcE
Confidence 9999 999999975433
No 64
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.57 E-value=7.7e-15 Score=124.20 Aligned_cols=78 Identities=24% Similarity=0.341 Sum_probs=71.4
Q ss_pred CCCceEcChhhHHHHhccCCeEEEEEEecCCCCCCc----HHHHHHHHHccC-CCCcEEEEEecccCCCcccHHHHhhcC
Q psy3889 20 SKGHVSLDTHNFDKILSKFHTTLVKFDIAYPYGAKH----EAFLEVAESSKH-QPDFLVAEVGVKDYGERDNEDLAKRGC 94 (243)
Q Consensus 20 ~~~v~~L~~~nF~~~v~~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~-~~~v~vakVd~~d~~~~~n~~l~~~~~ 94 (243)
...+..++.++|++.+..+++++|.||+ |||++| |.|+++++.+.. .+++.+++||++ .+++++++|+
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~v~f~a--~wC~~C~~~~p~~~~~a~~~~~~~~~v~~~~vd~~-----~~~~l~~~~~ 201 (241)
T 3idv_A 129 PEVTLVLTKENFDEVVNDADIILVEFYA--PWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDAT-----AETDLAKRFD 201 (241)
T ss_dssp CCSSEECCTTTHHHHHHHCSEEEEEEEC--TTCTGGGGTHHHHHHHHHHHHTSSSCCCEEEEETT-----TCHHHHHHTT
T ss_pred cccceeccHHHHHHhhccCCeEEEEEEC--CCCHHHHHhHHHHHHHHHHHhccCCcEEEEEEECC-----CCHHHHHHcC
Confidence 4468999999999999888999999999 999999 999999999864 456999999998 7899999999
Q ss_pred cc-CceEEEec
Q psy3889 95 LT-PQLLWAFC 104 (243)
Q Consensus 95 V~-~PTi~lF~ 104 (243)
|+ +||+++|+
T Consensus 202 v~~~Pt~~~~~ 212 (241)
T 3idv_A 202 VSGYPTLKIFR 212 (241)
T ss_dssp CCSSSEEEEEE
T ss_pred CcccCEEEEEE
Confidence 99 99999997
No 65
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.57 E-value=3.8e-15 Score=134.41 Aligned_cols=77 Identities=17% Similarity=0.212 Sum_probs=69.3
Q ss_pred cCCCceEcChhhHHHHh-ccCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhc
Q psy3889 19 LSKGHVSLDTHNFDKIL-SKFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRG 93 (243)
Q Consensus 19 ~~~~v~~L~~~nF~~~v-~~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~ 93 (243)
....+..|+..||++.+ +++++++|.||| |||+|| |.|+++++.+++..++.+++||++ .+. +++|
T Consensus 247 ~~~~v~~l~~~~f~~~~~~~~k~~lv~f~a--~wC~~C~~~~p~~~~la~~~~~~~~v~~~~vd~~-----~~~--~~~~ 317 (361)
T 3uem_A 247 DKQPVKVLVGKNFEDVAFDEKKNVFVEFYA--PWCGHCKQLAPIWDKLGETYKDHENIVIAKMDST-----ANE--VEAV 317 (361)
T ss_dssp TTSSSEEECTTTHHHHHTCTTCEEEEEEEC--TTCHHHHHHHHHHHHHHHHTTTCSSEEEEEEETT-----TCB--CSSC
T ss_pred ccCCcEEeecCchhhhcccCCCcEEEEEec--CcCHhHHHHHHHHHHHHHHhccCCcEEEEEEECC-----ccc--hhhc
Confidence 44569999999999988 788999999999 999999 999999999977668999999997 444 7899
Q ss_pred Ccc-CceEEEec
Q psy3889 94 CLT-PQLLWAFC 104 (243)
Q Consensus 94 ~V~-~PTi~lF~ 104 (243)
+|+ |||+++|+
T Consensus 318 ~v~~~Pt~~~~~ 329 (361)
T 3uem_A 318 KVHSFPTLKFFP 329 (361)
T ss_dssp CCCSSSEEEEEC
T ss_pred CCcccCeEEEEE
Confidence 999 99999995
No 66
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=99.57 E-value=1e-14 Score=107.92 Aligned_cols=77 Identities=13% Similarity=0.137 Sum_probs=68.3
Q ss_pred ceEcCh-hhHHHHhc--cCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhcCc
Q psy3889 23 HVSLDT-HNFDKILS--KFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRGCL 95 (243)
Q Consensus 23 v~~L~~-~nF~~~v~--~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~~V 95 (243)
++++++ ++|++.+. ++++++|.||+ |||++| |.|+++++.+. +++.++.||++ .+++++++|+|
T Consensus 2 v~~l~~~~~~~~~l~~~~~~~~vv~f~~--~~C~~C~~~~~~l~~~~~~~~--~~~~~~~v~~~-----~~~~~~~~~~v 72 (106)
T 1xwb_A 2 VYQVKDKADLDGQLTKASGKLVVLDFFA--TWCGPCKMISPKLVELSTQFA--DNVVVLKVDVD-----ECEDIAMEYNI 72 (106)
T ss_dssp EEECCSHHHHHHHHHHHTTSEEEEEEEC--TTCHHHHHHHHHHHHHHHHTT--TTEEEEEEETT-----TCHHHHHHTTC
T ss_pred ceecCCHHHHHHHHHhcCCCEEEEEEEC--CcCHHHHHhhHHHHHHHHHhC--CCeEEEEEecc-----chHHHHHHcCC
Confidence 567888 99999985 78999999999 999999 99999999885 47999999997 78999999999
Q ss_pred c-CceEEEeccchH
Q psy3889 96 T-PQLLWAFCVADS 108 (243)
Q Consensus 96 ~-~PTi~lF~~~~~ 108 (243)
. +||+++|+++..
T Consensus 73 ~~~Pt~~~~~~G~~ 86 (106)
T 1xwb_A 73 SSMPTFVFLKNGVK 86 (106)
T ss_dssp CSSSEEEEEETTEE
T ss_pred CcccEEEEEcCCcE
Confidence 9 999999975443
No 67
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=99.56 E-value=6.9e-15 Score=124.95 Aligned_cols=91 Identities=19% Similarity=0.213 Sum_probs=78.8
Q ss_pred hcCCCceEcChhhHHHHh-ccCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhh
Q psy3889 18 VLSKGHVSLDTHNFDKIL-SKFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKR 92 (243)
Q Consensus 18 ~~~~~v~~L~~~nF~~~v-~~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~ 92 (243)
..+..+..||+++|++.+ +++++|+|.||+ |||++| |.|+++++.+.+ ++.++.||++ .+++++++
T Consensus 9 ~~~~~~~~lt~~~f~~~v~~~~k~vvv~F~a--~wC~~C~~~~p~l~~l~~~~~~--~v~~~~vd~d-----~~~~l~~~ 79 (222)
T 3dxb_A 9 PMSDKIIHLTDDSFDTDVLKADGAILVDFWA--EWCGPCKMIAPILDEIADEYQG--KLTVAKLNID-----QNPGTAPK 79 (222)
T ss_dssp CCSCCCEECCTTTHHHHHTTCSSCEEEEEEC--TTCHHHHHHHHHHHHHHHHTTT--TCEEEEEETT-----TCTTTGGG
T ss_pred CCCCCceeCCHHHHHHHHHhcCCEEEEEEEC--CcCHHHHHHHHHHHHHHHHhcC--CcEEEEEECC-----CCHHHHHH
Confidence 345678999999999964 888999999999 999999 999999999864 5999999997 78899999
Q ss_pred cCcc-CceEEEec------------cchHhhhhhhHHHHh
Q psy3889 93 GCLT-PQLLWAFC------------VADSLNKTLFILIIF 119 (243)
Q Consensus 93 ~~V~-~PTi~lF~------------~~~~l~~~~f~~~~i 119 (243)
|+|. +||+++|+ +.++|.+ |+++.+
T Consensus 80 ~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~--~l~~~l 117 (222)
T 3dxb_A 80 YGIRGIPTLLLFKNGEVAATKVGALSKGQLKE--FLDANL 117 (222)
T ss_dssp GTCCSBSEEEEEETTEEEEEEESCCCHHHHHH--HHHHHS
T ss_pred cCCCcCCEEEEEECCeEEEEeccccChHHHHH--HHHhhc
Confidence 9999 99999997 5678888 844443
No 68
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.56 E-value=5.2e-15 Score=115.97 Aligned_cols=85 Identities=14% Similarity=0.098 Sum_probs=71.6
Q ss_pred cCCCceEcChhhHHHHhcc--CCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhh
Q psy3889 19 LSKGHVSLDTHNFDKILSK--FHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKR 92 (243)
Q Consensus 19 ~~~~v~~L~~~nF~~~v~~--~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~ 92 (243)
.+..++.++.++|++.+.. +++++|.||+ |||++| |.|+++++.+. .+++.++.||++ ++++++++
T Consensus 5 ~~~~v~~l~~~~f~~~~~~~~~~~vlv~f~a--~wC~~C~~~~p~~~~l~~~~~-~~~v~~~~vd~~-----~~~~~~~~ 76 (137)
T 2dj0_A 5 SSGYIKYFNDKTIDEELERDKRVTWIVEFFA--NWSNDCQSFAPIYADLSLKYN-CTGLNFGKVDVG-----RYTDVSTR 76 (137)
T ss_dssp CCSCCEECCTTHHHHHHHHSTTSCEEEEECC--TTCSTTTTTHHHHHHHHHHHC-SSSCEEEECCTT-----TCHHHHHH
T ss_pred CCceEEEccHhhHHHHHhcCCCCEEEEEEEC--CCCHHHHHHHHHHHHHHHHhC-CCCeEEEEEeCc-----cCHHHHHH
Confidence 3456899999999999843 3489999999 999999 99999999985 347999999997 78999999
Q ss_pred cCc-------cCceEEEeccchHhhh
Q psy3889 93 GCL-------TPQLLWAFCVADSLNK 111 (243)
Q Consensus 93 ~~V-------~~PTi~lF~~~~~l~~ 111 (243)
|+| .+||+++|+++..+..
T Consensus 77 ~~v~~~~~~~~~Pt~~~~~~G~~~~~ 102 (137)
T 2dj0_A 77 YKVSTSPLTKQLPTLILFQGGKEAMR 102 (137)
T ss_dssp TTCCCCSSSSCSSEEEEESSSSEEEE
T ss_pred ccCcccCCcCCCCEEEEEECCEEEEE
Confidence 999 4999999985544433
No 69
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=99.56 E-value=1.2e-14 Score=112.54 Aligned_cols=81 Identities=10% Similarity=0.119 Sum_probs=70.1
Q ss_pred hcCCCceEc-ChhhHHHHhc----cCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHH
Q psy3889 18 VLSKGHVSL-DTHNFDKILS----KFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNED 88 (243)
Q Consensus 18 ~~~~~v~~L-~~~nF~~~v~----~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~ 88 (243)
.....++++ +.++|++.+. ++++++|.||+ |||++| |.|+++++.+. ++.++.||++ ++.+
T Consensus 13 ~~~~~v~~l~~~~~~~~~l~~~~~~~k~vvv~f~a--~wC~~C~~~~~~l~~l~~~~~---~v~~~~vd~d-----~~~~ 82 (124)
T 1xfl_A 13 SEEGQVIACHTVETWNEQLQKANESKTLVVVDFTA--SWCGPCRFIAPFFADLAKKLP---NVLFLKVDTD-----ELKS 82 (124)
T ss_dssp CCCSCCEEESSHHHHHHHHHHHHHTTCEEEEEEEC--TTCHHHHHHHHHHHHHHHHCS---SEEEEEEETT-----TSHH
T ss_pred cCCCcEEEeCCHHHHHHHHHHhhhcCCEEEEEEEC--CCCHHHHHHHHHHHHHHHHCC---CcEEEEEECc-----cCHH
Confidence 344568888 7799999884 48999999999 999999 99999999874 6999999997 7899
Q ss_pred HHhhcCcc-CceEEEeccchH
Q psy3889 89 LAKRGCLT-PQLLWAFCVADS 108 (243)
Q Consensus 89 l~~~~~V~-~PTi~lF~~~~~ 108 (243)
++++|+|. +||+++|+++..
T Consensus 83 l~~~~~v~~~Pt~~~~~~G~~ 103 (124)
T 1xfl_A 83 VASDWAIQAMPTFMFLKEGKI 103 (124)
T ss_dssp HHHHTTCCSSSEEEEEETTEE
T ss_pred HHHHcCCCccCEEEEEECCEE
Confidence 99999999 999999975443
No 70
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=99.55 E-value=1.3e-14 Score=107.31 Aligned_cols=75 Identities=17% Similarity=0.250 Sum_probs=65.6
Q ss_pred ChhhHHHHhc--cCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhcCcc-Cce
Q psy3889 27 DTHNFDKILS--KFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRGCLT-PQL 99 (243)
Q Consensus 27 ~~~nF~~~v~--~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~~V~-~PT 99 (243)
+.++|++.+. ++++++|.||+ |||++| |.|+++++.+. ++.++.||++ ++++++++|+|. +||
T Consensus 7 ~~~~~~~~l~~~~~~~~~v~f~~--~~C~~C~~~~~~~~~~~~~~~---~~~~~~vd~~-----~~~~~~~~~~v~~~Pt 76 (105)
T 3m9j_A 7 SKTAFQEALDAAGDKLVVVDFSA--TWCGPCKMIKPFFHSLSEKYS---NVIFLEVDVD-----DCQDVASESEVKSMPT 76 (105)
T ss_dssp SHHHHHHHHHHTTTSCEEEEEEC--TTCHHHHHHHHHHHHHHHHST---TSEEEEEETT-----TCHHHHHHTTCCBSSE
T ss_pred CHHHHHHHHHhcCCCeEEEEEEC--CCChhhHHHHHHHHHHHHHcc---CeEEEEEEhh-----hhHHHHHHcCCCcCcE
Confidence 5789999985 78999999999 999999 99999999874 4999999997 789999999999 999
Q ss_pred EEEeccchHhhh
Q psy3889 100 LWAFCVADSLNK 111 (243)
Q Consensus 100 i~lF~~~~~l~~ 111 (243)
+++|+++..+..
T Consensus 77 ~~~~~~g~~~~~ 88 (105)
T 3m9j_A 77 FQFFKKGQKVGE 88 (105)
T ss_dssp EEEEETTEEEEE
T ss_pred EEEEECCeEEEE
Confidence 999975544333
No 71
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=99.55 E-value=1.1e-14 Score=113.26 Aligned_cols=78 Identities=4% Similarity=-0.076 Sum_probs=66.6
Q ss_pred CCceEcChhhHHHHh-ccCC--eEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhc
Q psy3889 21 KGHVSLDTHNFDKIL-SKFH--TTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRG 93 (243)
Q Consensus 21 ~~v~~L~~~nF~~~v-~~~k--~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~ 93 (243)
+.+++++.++|.+.| +.++ +|+|.||| |||++| |.++++|+.+. ++.|++||++ ++ +++|
T Consensus 3 G~v~~it~~~f~~~v~~~~~~~~vvv~F~a--~wc~~C~~~~p~l~~la~~~~---~v~f~kvd~d-----~~---~~~~ 69 (118)
T 3evi_A 3 GELREISGNQYVNEVTNAEEDVWVIIHLYR--SSIPMCLLVNQHLSLLARKFP---ETKFVKAIVN-----SC---IQHY 69 (118)
T ss_dssp CSCEECCGGGHHHHTTTCCTTCEEEEEEEC--TTSHHHHHHHHHHHHHHHHCT---TSEEEEEEGG-----GT---STTC
T ss_pred cceEEeCHHHHHHHHHhcCCCCeEEEEEeC--CCChHHHHHHHHHHHHHHHCC---CCEEEEEEhH-----Hh---HHHC
Confidence 458899999999977 4444 99999999 999999 99999999873 6999999997 33 6899
Q ss_pred Ccc-CceEEEeccchHhhh
Q psy3889 94 CLT-PQLLWAFCVADSLNK 111 (243)
Q Consensus 94 ~V~-~PTi~lF~~~~~l~~ 111 (243)
+|+ +||+++|++++.+-+
T Consensus 70 ~v~~~PT~~~fk~G~~v~~ 88 (118)
T 3evi_A 70 HDNCLPTIFVYKNGQIEAK 88 (118)
T ss_dssp CGGGCSEEEEEETTEEEEE
T ss_pred CCCCCCEEEEEECCEEEEE
Confidence 999 999999997665555
No 72
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=99.54 E-value=2e-14 Score=105.89 Aligned_cols=76 Identities=18% Similarity=0.167 Sum_probs=66.3
Q ss_pred ceEcCh-hhHHHHhc--cCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhcCc
Q psy3889 23 HVSLDT-HNFDKILS--KFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRGCL 95 (243)
Q Consensus 23 v~~L~~-~nF~~~v~--~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~~V 95 (243)
+.++++ ++|++.+. ++++++|.||+ |||++| |.|+++++.+. ++.++.||++ .+++++++|+|
T Consensus 1 v~~i~~~~~~~~~l~~~~~~~~~v~f~~--~~C~~C~~~~~~l~~~~~~~~---~~~~~~v~~~-----~~~~~~~~~~v 70 (104)
T 2vim_A 1 MRVLATAADLEKLINENKGRLIVVDFFA--QWCGPCRNIAPKVEALAKEIP---EVEFAKVDVD-----QNEEAAAKYSV 70 (104)
T ss_dssp CEECCSHHHHHHHHHTTTTSCEEEEEEC--TTCHHHHHHHHHHHHHHHHCT---TSEEEEEETT-----TCHHHHHHTTC
T ss_pred CeecCCHHHHHHHHHhcCCCeEEEEEEC--CCCHHHHHhhHHHHHHHHHCC---CCEEEEEecc-----CCHHHHHHcCC
Confidence 356666 99999995 78899999999 999999 89999998873 7999999997 78999999999
Q ss_pred c-CceEEEeccchH
Q psy3889 96 T-PQLLWAFCVADS 108 (243)
Q Consensus 96 ~-~PTi~lF~~~~~ 108 (243)
. +||+++|+++..
T Consensus 71 ~~~Pt~~~~~~g~~ 84 (104)
T 2vim_A 71 TAMPTFVFIKDGKE 84 (104)
T ss_dssp CSSSEEEEEETTEE
T ss_pred ccccEEEEEeCCcE
Confidence 9 999999975443
No 73
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=99.54 E-value=8e-15 Score=115.03 Aligned_cols=85 Identities=5% Similarity=0.011 Sum_probs=68.9
Q ss_pred cCCCceEcChhhHHHHhccCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCC----cccHHHH
Q psy3889 19 LSKGHVSLDTHNFDKILSKFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGE----RDNEDLA 90 (243)
Q Consensus 19 ~~~~v~~L~~~nF~~~v~~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~----~~n~~l~ 90 (243)
..+.++.++.++|++.+.+ +++|.||| |||++| |.|+++++.+. +.++.||+++..+ ..+++++
T Consensus 14 ~~~~v~~l~~~~~~~~~~~--~vlv~F~a--~wC~~C~~~~p~l~~l~~~~~----v~~~~vd~~~~~~~~~~d~~~~l~ 85 (135)
T 3emx_A 14 EDGRLIYITPEEFRQLLQG--DAILAVYS--KTCPHCHRDWPQLIQASKEVD----VPIVMFIWGSLIGERELSAARLEM 85 (135)
T ss_dssp ETTEEEECCHHHHHHHHTS--SEEEEEEE--TTCHHHHHHHHHHHHHHTTCC----SCEEEEEECTTCCHHHHHHHHHHH
T ss_pred ccCceeecCHHHHHHHhCC--cEEEEEEC--CcCHhhhHhChhHHHHHHHCC----CEEEEEECCCchhhhhhhhhHHHH
Confidence 3456899999999999966 99999999 999999 89999987763 8899999921000 1789999
Q ss_pred hhcCcc-CceEEEeccchHhhh
Q psy3889 91 KRGCLT-PQLLWAFCVADSLNK 111 (243)
Q Consensus 91 ~~~~V~-~PTi~lF~~~~~l~~ 111 (243)
++|+|. +||+++|+++..+..
T Consensus 86 ~~~~v~~~Pt~~~~~~G~~v~~ 107 (135)
T 3emx_A 86 NKAGVEGTPTLVFYKEGRIVDK 107 (135)
T ss_dssp HHHTCCSSSEEEEEETTEEEEE
T ss_pred HHcCCceeCeEEEEcCCEEEEE
Confidence 999999 999999985443333
No 74
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=99.54 E-value=1.5e-14 Score=113.60 Aligned_cols=80 Identities=23% Similarity=0.222 Sum_probs=55.2
Q ss_pred CCceEcChhhHHHHhccCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhcCcc
Q psy3889 21 KGHVSLDTHNFDKILSKFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRGCLT 96 (243)
Q Consensus 21 ~~v~~L~~~nF~~~v~~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~~V~ 96 (243)
+.+++++..+|++.+..++.++|.||+ |||++| |.|+++++.+.+ ++.|+.||++ .+.+++++|+|.
T Consensus 33 ~~v~~l~~~~~~~~~~~~~~vvv~f~~--~~C~~C~~~~~~l~~l~~~~~~--~v~~~~vd~~-----~~~~l~~~~~v~ 103 (140)
T 1v98_A 33 PWVVEADEKGFAQEVAGAPLTLVDFFA--PWCGPCRLVSPILEELARDHAG--RLKVVKVNVD-----EHPGLAARYGVR 103 (140)
T ss_dssp ----------------CCCEEEEEEEC--TTCHHHHHHHHHHHHHHHHTTT--TEEEEEEETT-----TCHHHHHHTTCC
T ss_pred CccccCCHHHHHHHHHcCCCEEEEEEC--CCCHHHHHHHHHHHHHHHHccC--ceEEEEEECC-----CCHHHHHHCCCC
Confidence 568999999999988444449999999 999999 999999998854 6999999997 789999999999
Q ss_pred -CceEEEeccchHh
Q psy3889 97 -PQLLWAFCVADSL 109 (243)
Q Consensus 97 -~PTi~lF~~~~~l 109 (243)
+||+++|+++..+
T Consensus 104 ~~Pt~~~~~~G~~~ 117 (140)
T 1v98_A 104 SVPTLVLFRRGAPV 117 (140)
T ss_dssp SSSEEEEEETTEEE
T ss_pred ccCEEEEEeCCcEE
Confidence 9999999754433
No 75
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=99.53 E-value=3.5e-14 Score=107.13 Aligned_cols=79 Identities=13% Similarity=0.181 Sum_probs=68.5
Q ss_pred CCceEc-ChhhHHHHhcc----CCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHh
Q psy3889 21 KGHVSL-DTHNFDKILSK----FHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAK 91 (243)
Q Consensus 21 ~~v~~L-~~~nF~~~v~~----~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~ 91 (243)
..++.+ +.++|++.+.. +++++|.||+ |||++| |.|+++++.+. ++.++.||++ .++++++
T Consensus 6 ~~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~--~~C~~C~~~~~~l~~~~~~~~---~~~~~~v~~~-----~~~~~~~ 75 (118)
T 2vm1_A 6 GAVIACHTKQEFDTHMANGKDTGKLVIIDFTA--SWCGPCRVIAPVFAEYAKKFP---GAIFLKVDVD-----ELKDVAE 75 (118)
T ss_dssp CCEEECCSHHHHHHHHHHHHHHTCCEEEEEEC--TTCHHHHHHHHHHHHHHHHCT---TSEEEEEETT-----TSHHHHH
T ss_pred CceEEecCHHHHHHHHHhcccCCCEEEEEEEC--CCCHhHHHHhHHHHHHHHHCC---CcEEEEEEcc-----cCHHHHH
Confidence 457888 57999998843 8899999999 999999 99999998874 6999999997 7899999
Q ss_pred hcCcc-CceEEEeccchHh
Q psy3889 92 RGCLT-PQLLWAFCVADSL 109 (243)
Q Consensus 92 ~~~V~-~PTi~lF~~~~~l 109 (243)
+|+|. +||+++|+++..+
T Consensus 76 ~~~v~~~Pt~~~~~~g~~~ 94 (118)
T 2vm1_A 76 AYNVEAMPTFLFIKDGEKV 94 (118)
T ss_dssp HTTCCSBSEEEEEETTEEE
T ss_pred HcCCCcCcEEEEEeCCeEE
Confidence 99999 9999999754433
No 76
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=99.52 E-value=3e-14 Score=106.66 Aligned_cols=78 Identities=10% Similarity=0.105 Sum_probs=67.7
Q ss_pred CCceEc-ChhhHHHHhc----cCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHh
Q psy3889 21 KGHVSL-DTHNFDKILS----KFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAK 91 (243)
Q Consensus 21 ~~v~~L-~~~nF~~~v~----~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~ 91 (243)
+.++.+ +.++|++.+. ++++++|.||+ |||++| |.|+++++.+. ++.++.||++ .++++++
T Consensus 4 ~~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~--~~C~~C~~~~~~l~~~~~~~~---~v~~~~v~~~-----~~~~~~~ 73 (113)
T 1ti3_A 4 GQVIACHTVDTWKEHFEKGKGSQKLIVVDFTA--SWCPPCKMIAPIFAELAKKFP---NVTFLKVDVD-----ELKAVAE 73 (113)
T ss_dssp CCEEEECSHHHHHHHHHHHTTSSSEEEEEEEC--SSCHHHHHHHHHHHHHHHHCS---SEEEEEEETT-----TCHHHHH
T ss_pred CceeEeccHHHHHHHHHHhhhcCCeEEEEEEC--CCCHHHHHHHHHHHHHHHhCC---CcEEEEEEcc-----ccHHHHH
Confidence 457777 6799999884 48899999999 999999 89999998874 6999999997 7899999
Q ss_pred hcCcc-CceEEEeccchH
Q psy3889 92 RGCLT-PQLLWAFCVADS 108 (243)
Q Consensus 92 ~~~V~-~PTi~lF~~~~~ 108 (243)
+|+|. +||+++|+++.-
T Consensus 74 ~~~v~~~Pt~~~~~~G~~ 91 (113)
T 1ti3_A 74 EWNVEAMPTFIFLKDGKL 91 (113)
T ss_dssp HHHCSSTTEEEEEETTEE
T ss_pred hCCCCcccEEEEEeCCEE
Confidence 99999 999999975443
No 77
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.52 E-value=1.8e-14 Score=134.87 Aligned_cols=77 Identities=17% Similarity=0.288 Sum_probs=69.9
Q ss_pred CCCceEcChhhHHHHh-ccCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhcC
Q psy3889 20 SKGHVSLDTHNFDKIL-SKFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRGC 94 (243)
Q Consensus 20 ~~~v~~L~~~nF~~~v-~~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~~ 94 (243)
...+..++..+|++.+ +++++|+|.||| |||+|| |.|+++++.+++.+++.+++||++ .+ +++.+|+
T Consensus 351 ~~~v~~~~~~~~~~~~~~~~k~vlv~f~a--~wC~~C~~~~p~~~~l~~~~~~~~~v~~~~id~~-----~~-~~~~~~~ 422 (481)
T 3f8u_A 351 DGPVKVVVAENFDEIVNNENKDVLIEFYA--PWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDAT-----AN-DVPSPYE 422 (481)
T ss_dssp CSSSEEECTTTHHHHHTCTTCEEEEEEEC--TTBHHHHHHHHHHHHHHHHTTTCSSEEEEEEETT-----SS-CCCTTCC
T ss_pred CCCeEEecccCHHHHhhcCCCcEEEEEec--CcChhHHHhhHHHHHHHHHhccCCCEEEEEEECC-----ch-hhHhhCC
Confidence 3468899999999998 568999999999 999999 999999999977668999999997 55 7899999
Q ss_pred cc-CceEEEec
Q psy3889 95 LT-PQLLWAFC 104 (243)
Q Consensus 95 V~-~PTi~lF~ 104 (243)
|. +||+++|+
T Consensus 423 v~~~Pt~~~~~ 433 (481)
T 3f8u_A 423 VRGFPTIYFSP 433 (481)
T ss_dssp CCSSSEEEEEC
T ss_pred CcccCEEEEEe
Confidence 99 99999997
No 78
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=99.52 E-value=3.3e-14 Score=107.42 Aligned_cols=78 Identities=8% Similarity=0.024 Sum_probs=65.9
Q ss_pred ceEcChhhHHHHhccCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhcCcc-C
Q psy3889 23 HVSLDTHNFDKILSKFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRGCLT-P 97 (243)
Q Consensus 23 v~~L~~~nF~~~v~~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~~V~-~ 97 (243)
+..++.++| +.+.++++++|.||+ |||++| |.|+++++.+. ++.++.||++ .+++++++|+|. +
T Consensus 5 ~~~~~~~~f-~~~~~~~~~vv~f~a--~wC~~C~~~~~~l~~~~~~~~---~v~~~~vd~~-----~~~~l~~~~~v~~~ 73 (110)
T 2l6c_A 5 RDITTEAGM-AHFEGLSDAIVFFHK--NLCPHCKNMEKVLDKFGARAP---QVAISSVDSE-----ARPELMKELGFERV 73 (110)
T ss_dssp SBCGGGCSH-HHHTTCSEEEEEEEC--SSCSTHHHHHHHHHHHHTTCT---TSCEEEEEGG-----GCHHHHHHTTCCSS
T ss_pred eecCCHHHH-HHHHcCCCEEEEEEC--CCCHhHHHHHHHHHHHHHHCC---CcEEEEEcCc-----CCHHHHHHcCCccc
Confidence 456788999 666677899999999 999999 88888887763 7999999997 789999999999 9
Q ss_pred ceEEEeccchHhhh
Q psy3889 98 QLLWAFCVADSLNK 111 (243)
Q Consensus 98 PTi~lF~~~~~l~~ 111 (243)
||+++|+++..+..
T Consensus 74 Pt~~~~~~G~~v~~ 87 (110)
T 2l6c_A 74 PTLVFIRDGKVAKV 87 (110)
T ss_dssp CEEEEEESSSEEEE
T ss_pred CEEEEEECCEEEEE
Confidence 99999975544433
No 79
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=99.52 E-value=1.2e-14 Score=110.64 Aligned_cols=85 Identities=11% Similarity=-0.040 Sum_probs=66.6
Q ss_pred hhcCCCceEcChhhHHHHhccCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCC-CcccHHHHh
Q psy3889 17 LVLSKGHVSLDTHNFDKILSKFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYG-ERDNEDLAK 91 (243)
Q Consensus 17 ~~~~~~v~~L~~~nF~~~v~~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~-~~~n~~l~~ 91 (243)
.....++..++.++|++.+.++++++|.||+ |||++| |.|+++++.+. ..+.++ |+++.. ...++++++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~f~a--~wC~~C~~~~p~l~~~~~~~~--~~v~~~--~~~~~~~~~~~~~~~~ 81 (118)
T 1zma_A 8 LDNIKDLEVTTVVRAQEALDKKETATFFIGR--KTCPYCRKFAGTLSGVVAETK--AHIYFI--NSEEPSQLNDLQAFRS 81 (118)
T ss_dssp HHHTTTSEECCHHHHHHHHHTTCCEEEEEEC--TTCHHHHHHHHHHHHHHHHHC--CCCEEE--ETTCGGGHHHHHHHHH
T ss_pred HHHHhhhhcCCHHHHHHHHhCCCeEEEEEEC--CCCccHHHHHHHHHHHHHhcC--CeEEEE--ECCCcCcHHHHHHHHH
Confidence 3456788999999999999888999999999 999999 99999998874 245554 443110 014578999
Q ss_pred hcCcc-CceEEEeccch
Q psy3889 92 RGCLT-PQLLWAFCVAD 107 (243)
Q Consensus 92 ~~~V~-~PTi~lF~~~~ 107 (243)
+|+|. +||+++|+++.
T Consensus 82 ~~~i~~~Pt~~~~~~G~ 98 (118)
T 1zma_A 82 RYGIPTVPGFVHITDGQ 98 (118)
T ss_dssp HHTCCSSCEEEEEETTE
T ss_pred HcCCCCCCeEEEEECCE
Confidence 99999 99999997443
No 80
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=99.52 E-value=1.4e-14 Score=111.47 Aligned_cols=75 Identities=12% Similarity=0.043 Sum_probs=66.0
Q ss_pred CCceEcChhhHH-----HHhccCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEe--cccCCCcccHHH
Q psy3889 21 KGHVSLDTHNFD-----KILSKFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVG--VKDYGERDNEDL 89 (243)
Q Consensus 21 ~~v~~L~~~nF~-----~~v~~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd--~~d~~~~~n~~l 89 (243)
..+..++..+|+ ....++++++|.||+ |||++| |.++++++.+. +++.++.|| ++ .+.++
T Consensus 4 ~~~~~l~~~~~~~~~~~~~~~~~k~~lv~f~a--~wC~~C~~~~~~l~~~~~~~~--~~v~~~~v~~~~d-----~~~~~ 74 (126)
T 2l57_A 4 EGIKQINFQSINVVENLEEAKEGIPTIIMFKT--DTCPYCVEMQKELSYVSKERE--GKFNIYYARLEEE-----KNIDL 74 (126)
T ss_dssp CCSSCTTTTCCSEESSTTTCCSSSCEEEEEEC--SSCHHHHHHHHHHHHHHHHSS--SSCEEEEEETTSS-----HHHHH
T ss_pred cccCCCCccccchhHHHHHHhCCCcEEEEEEC--CCCccHHHHHHHHHHHHHHhc--CCeEEEEEeCCCC-----chHHH
Confidence 456778888888 555778899999999 999999 99999999885 479999999 86 78999
Q ss_pred HhhcCcc-CceEEEec
Q psy3889 90 AKRGCLT-PQLLWAFC 104 (243)
Q Consensus 90 ~~~~~V~-~PTi~lF~ 104 (243)
+++|+|. +||+++|.
T Consensus 75 ~~~~~v~~~Pt~~~~~ 90 (126)
T 2l57_A 75 AYKYDANIVPTTVFLD 90 (126)
T ss_dssp HHHTTCCSSSEEEEEC
T ss_pred HHHcCCcceeEEEEEC
Confidence 9999999 99999997
No 81
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=99.51 E-value=3.4e-14 Score=109.11 Aligned_cols=80 Identities=9% Similarity=0.143 Sum_probs=67.9
Q ss_pred CCceEcCh-hhHHHHhccCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhcCc
Q psy3889 21 KGHVSLDT-HNFDKILSKFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRGCL 95 (243)
Q Consensus 21 ~~v~~L~~-~nF~~~v~~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~~V 95 (243)
..+..++. ++|++.++++++++|.||+ |||++| |.|+++++.+.+ .++.++.||++ .+++++++|+|
T Consensus 15 ~~~~~i~~~~~f~~~l~~~k~vvv~f~a--~~C~~C~~~~~~l~~l~~~~~~-~~v~~~~vd~d-----~~~~~~~~~~v 86 (121)
T 2j23_A 15 GSVQVISSYDQFKQVTGGDKVVVIDFWA--TWCGPCKMIGPVFEKISDTPAG-DKVGFYKVDVD-----EQSQIAQEVGI 86 (121)
T ss_dssp CCEEECCSHHHHHHHHSSSSCEEEEEEC--TTCSTHHHHHHHHHHHHTSTHH-HHSEEEEEETT-----TCHHHHHHHTC
T ss_pred cceEEcCCHHHHHHHHcCCCEEEEEEEC--CCCHhHHHHHHHHHHHHHHCcC-CcEEEEEEECc-----CCHHHHHHcCC
Confidence 34666665 9999999888999999999 999999 889988887743 14999999997 78999999999
Q ss_pred c-CceEEEeccchH
Q psy3889 96 T-PQLLWAFCVADS 108 (243)
Q Consensus 96 ~-~PTi~lF~~~~~ 108 (243)
. +||+++|+++..
T Consensus 87 ~~~Pt~~~~~~G~~ 100 (121)
T 2j23_A 87 RAMPTFVFFKNGQK 100 (121)
T ss_dssp CSSSEEEEEETTEE
T ss_pred CcccEEEEEECCeE
Confidence 9 999999975433
No 82
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=99.50 E-value=5e-14 Score=107.97 Aligned_cols=75 Identities=16% Similarity=0.128 Sum_probs=66.5
Q ss_pred CCceEc--ChhhHHHHh-ccCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhc
Q psy3889 21 KGHVSL--DTHNFDKIL-SKFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRG 93 (243)
Q Consensus 21 ~~v~~L--~~~nF~~~v-~~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~ 93 (243)
..+..+ +..+|++.+ +++++++|.||+ |||++| |.|+++++.+ +++.++.||++ .+++++++|
T Consensus 3 ~~v~~~~g~~~~~~~~~~~~~~~vlv~f~a--~wC~~C~~~~~~l~~l~~~~---~~v~~~~vd~~-----~~~~~~~~~ 72 (118)
T 2f51_A 3 DPIVHFNGTHEALLNRIKEAPGLVLVDFFA--TWCGPCQRLGQILPSIAEAN---KDVTFIKVDVD-----KNGNAADAY 72 (118)
T ss_dssp CCSEEECSCHHHHHHHHHHCSSCEEEEEEC--TTCHHHHHHHHHHHHHHHHC---TTSEEEEEETT-----TCHHHHHHT
T ss_pred CcceEecCCHHHHHHHHHhCCCEEEEEEEC--CCCHHHHHHHHHHHHHHHHC---CCeEEEEEECC-----CCHHHHHhc
Confidence 457777 689999655 678999999999 999999 9999999987 47999999997 789999999
Q ss_pred Ccc-CceEEEecc
Q psy3889 94 CLT-PQLLWAFCV 105 (243)
Q Consensus 94 ~V~-~PTi~lF~~ 105 (243)
+|. +||+++|.+
T Consensus 73 ~i~~~Pt~~~~~~ 85 (118)
T 2f51_A 73 GVSSIPALFFVKK 85 (118)
T ss_dssp TCCSSSEEEEEEE
T ss_pred CCCCCCEEEEEeC
Confidence 999 999999975
No 83
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=99.50 E-value=2.3e-14 Score=114.95 Aligned_cols=76 Identities=7% Similarity=0.013 Sum_probs=66.4
Q ss_pred EcChhhHHHHh--ccCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhcCcc-C
Q psy3889 25 SLDTHNFDKIL--SKFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRGCLT-P 97 (243)
Q Consensus 25 ~L~~~nF~~~v--~~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~~V~-~ 97 (243)
..+.++|++.+ .++++|+|.||| |||++| |.++++++.+.+ .+.+++||++ ++++++++|+|. +
T Consensus 8 i~~~~~~~~~i~~~~~k~vlv~F~a--~WC~~C~~~~p~l~~l~~~~~~--~~~~~~vd~d-----~~~~l~~~~~v~~~ 78 (149)
T 3gix_A 8 LTSKKEVDQAIKSTAEKVLVLRFGR--DEDPVCLQLDDILSKTSSDLSK--MAAIYLVDVD-----QTAVYTQYFDISYI 78 (149)
T ss_dssp ECSHHHHHHHHHHCCSSEEEEEEEC--TTSHHHHHHHHHHHHHHTTTTT--TEEEEEEETT-----TCCHHHHHTTCCSS
T ss_pred cCCHHHHHHHHHhcCCCEEEEEEEC--CCCHHHHHHHHHHHHHHHHccC--ceEEEEEECC-----cCHHHHHHcCCCcc
Confidence 34688999988 568999999999 999999 999999988753 5999999997 789999999999 9
Q ss_pred ceEEEeccchHh
Q psy3889 98 QLLWAFCVADSL 109 (243)
Q Consensus 98 PTi~lF~~~~~l 109 (243)
||+++|+++..+
T Consensus 79 Pt~~~~~~G~~v 90 (149)
T 3gix_A 79 PSTVFFFNGQHM 90 (149)
T ss_dssp SEEEEEETTEEE
T ss_pred CeEEEEECCeEE
Confidence 999999865543
No 84
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=99.50 E-value=7.5e-14 Score=109.08 Aligned_cols=78 Identities=12% Similarity=0.195 Sum_probs=67.6
Q ss_pred CCCceEcC-hhhHHHHhc----cCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHH
Q psy3889 20 SKGHVSLD-THNFDKILS----KFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLA 90 (243)
Q Consensus 20 ~~~v~~L~-~~nF~~~v~----~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~ 90 (243)
...++.++ .++|++.+. ++++++|.||+ |||++| |.|+++++.+. ++.++.||++ ++++++
T Consensus 23 ~~~~~~i~~~~~~~~~~~~~~~~~k~vvv~f~a--~wC~~C~~~~~~l~~l~~~~~---~v~~~~v~~~-----~~~~~~ 92 (139)
T 3d22_A 23 GGNVHLITTKERWDQKLSEASRDGKIVLANFSA--RWCGPSRQIAPYYIELSENYP---SLMFLVIDVD-----ELSDFS 92 (139)
T ss_dssp CTTCEEECSHHHHHHHHHHHHHHTCCEEEEEEC--TTCHHHHHHHHHHHHHHHHCT---TSEEEEEETT-----TSHHHH
T ss_pred CCcEEEeCCHHHHHHHHHHHhhcCCEEEEEEEC--CCCHHHHHHHHHHHHHHHHCC---CCEEEEEeCc-----ccHHHH
Confidence 44577775 799999873 58899999999 999999 99999998873 6999999997 789999
Q ss_pred hhcCcc-CceEEEeccch
Q psy3889 91 KRGCLT-PQLLWAFCVAD 107 (243)
Q Consensus 91 ~~~~V~-~PTi~lF~~~~ 107 (243)
++|+|. +||+++|+++.
T Consensus 93 ~~~~v~~~Pt~~~~~~G~ 110 (139)
T 3d22_A 93 ASWEIKATPTFFFLRDGQ 110 (139)
T ss_dssp HHTTCCEESEEEEEETTE
T ss_pred HHcCCCcccEEEEEcCCe
Confidence 999999 99999997543
No 85
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=99.50 E-value=1.4e-14 Score=112.18 Aligned_cols=74 Identities=9% Similarity=0.064 Sum_probs=63.2
Q ss_pred eEcChhhHHHHhccCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhcCcc-Cc
Q psy3889 24 VSLDTHNFDKILSKFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRGCLT-PQ 98 (243)
Q Consensus 24 ~~L~~~nF~~~v~~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~~V~-~P 98 (243)
..++...++....++++++|.||+ |||++| |.++++++.+.+ ++.++.||++ .+++++++|+|+ +|
T Consensus 28 ~~~~~~~~~~~~~~~k~vlv~F~a--~wC~~C~~~~p~l~~~~~~~~~--~v~~~~vd~d-----~~~~l~~~~~v~~~P 98 (128)
T 3ul3_B 28 QQNGSNIINGVNMKNTVIVLYFFA--KWCQACTMQSTEMDKLQKYYGK--RIYLLKVDLD-----KNESLARKFSVKSLP 98 (128)
T ss_dssp CCCCCSSSSBTTSCCSEEEEEEEC--TTCHHHHHHHHHHHHHHHHHGG--GEEEEEEEGG-----GCHHHHHHTTCCSSS
T ss_pred ccCCccHHHHHHccCCEEEEEEEC--CCCHHHHHHhHHHHHHHHHhcC--CeEEEEEECC-----CCHHHHHHcCCCCcC
Confidence 344444555556788999999999 999999 999999999863 7999999998 789999999999 99
Q ss_pred eEEEeccc
Q psy3889 99 LLWAFCVA 106 (243)
Q Consensus 99 Ti~lF~~~ 106 (243)
|+++|+++
T Consensus 99 t~~~~~~G 106 (128)
T 3ul3_B 99 TIILLKNK 106 (128)
T ss_dssp EEEEEETT
T ss_pred EEEEEECC
Confidence 99999743
No 86
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=99.50 E-value=5.3e-14 Score=107.34 Aligned_cols=77 Identities=12% Similarity=0.144 Sum_probs=65.6
Q ss_pred ceEcC-hhhHHHHhccCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhcCcc-
Q psy3889 23 HVSLD-THNFDKILSKFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRGCLT- 96 (243)
Q Consensus 23 v~~L~-~~nF~~~v~~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~~V~- 96 (243)
+.+++ .++|+++++++++++|.||+ |||++| |.|+++++.+. ++.++.||++ .+++++++|+|.
T Consensus 14 ~~~~~~~~~~~~~~~~~k~vvv~F~a--~wC~~C~~~~p~l~~~~~~~~---~v~~~~vd~~-----~~~~l~~~~~v~~ 83 (114)
T 2oe3_A 14 ITKLTNLTEFRNLIKQNDKLVIDFYA--TWCGPCKMMQPHLTKLIQAYP---DVRFVKCDVD-----ESPDIAKECEVTA 83 (114)
T ss_dssp SCBCCSHHHHHHHHHHCSEEEEEEEC--TTCHHHHHTHHHHHHHHHHCT---TSEEEEEETT-----TCHHHHHHTTCCS
T ss_pred eeecCCHHHHHHHHhCCCEEEEEEEC--CCCHHHHHHHHHHHHHHHHCC---CCEEEEEECC-----CCHHHHHHCCCCc
Confidence 44555 46778888888999999999 999999 99999999874 3999999997 789999999999
Q ss_pred CceEEEeccchHh
Q psy3889 97 PQLLWAFCVADSL 109 (243)
Q Consensus 97 ~PTi~lF~~~~~l 109 (243)
+||+++|+++..+
T Consensus 84 ~Pt~~~~~~G~~~ 96 (114)
T 2oe3_A 84 MPTFVLGKDGQLI 96 (114)
T ss_dssp BSEEEEEETTEEE
T ss_pred ccEEEEEeCCeEE
Confidence 9999999754433
No 87
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=99.49 E-value=2.5e-14 Score=113.82 Aligned_cols=74 Identities=18% Similarity=0.248 Sum_probs=65.1
Q ss_pred ChhhHHHHh-c-cCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhcCcc-Cce
Q psy3889 27 DTHNFDKIL-S-KFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRGCLT-PQL 99 (243)
Q Consensus 27 ~~~nF~~~v-~-~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~~V~-~PT 99 (243)
+.++|++.+ + ++++|+|.||| |||++| |.|+++++.+.+ ++.+++||++ ++++++++|+|+ +||
T Consensus 10 ~~~~~~~~v~~~~~k~vlv~F~a--~wC~~C~~~~p~l~~l~~~~~~--~v~~~~vd~d-----~~~~~~~~~~i~~~Pt 80 (142)
T 1qgv_A 10 NGWQVDQAILSEEDRVVVIRFGH--DWDPTCMKMDEVLYSIAEKVKN--FAVIYLVDIT-----EVPDFNKMYELYDPCT 80 (142)
T ss_dssp SHHHHHHHHHTCSSSEEEEEEEC--TTSHHHHHHHHHHHHHHHHHTT--TEEEEEEETT-----TCCTTTTSSCSCSSCE
T ss_pred CHHHHHHHHHhcCCCEEEEEEEC--CCCHHHHHHHHHHHHHHHHhCC--CeEEEEEccc-----cCHHHHHHcCCCCCCE
Confidence 578999876 4 68999999999 999999 999999999853 6999999997 788899999999 999
Q ss_pred EEEeccchHh
Q psy3889 100 LWAFCVADSL 109 (243)
Q Consensus 100 i~lF~~~~~l 109 (243)
+++|+++..+
T Consensus 81 ~~~~~~G~~v 90 (142)
T 1qgv_A 81 VMFFFRNKHI 90 (142)
T ss_dssp EEEEETTEEE
T ss_pred EEEEECCcEE
Confidence 9999865443
No 88
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.49 E-value=1.1e-13 Score=116.57 Aligned_cols=80 Identities=10% Similarity=-0.008 Sum_probs=68.5
Q ss_pred CceEcChhhHHHHhccCCeE-EEEEEecCCCCCCc----HHHHHHHHHcc--CCCCcEEEEEecccCCCcccHHHHhhcC
Q psy3889 22 GHVSLDTHNFDKILSKFHTT-LVKFDIAYPYGAKH----EAFLEVAESSK--HQPDFLVAEVGVKDYGERDNEDLAKRGC 94 (243)
Q Consensus 22 ~v~~L~~~nF~~~v~~~k~v-lV~FyA~~pWC~~c----p~~~~lA~~~~--~~~~v~vakVd~~d~~~~~n~~l~~~~~ 94 (243)
.+..|++++|+.+...++++ +|.||+ |||++| |.|+++++.+. +.+++.++.||++ .+++++++|+
T Consensus 117 ~~~~l~~~~~~~~~~~~~~~~~v~F~a--~wC~~C~~~~p~~~~l~~~~~~~~~~~v~~~~vd~~-----~~~~l~~~~~ 189 (226)
T 1a8l_A 117 EETNLMDETKQAIRNIDQDVRILVFVT--PTCPYCPLAVRMAHKFAIENTKAGKGKILGDMVEAI-----EYPEWADQYN 189 (226)
T ss_dssp TCCCCCHHHHHHHTTCCSCEEEEEEEC--SSCTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEEGG-----GCHHHHHHTT
T ss_pred CCCCCCHHHHHHHHhcCCCcEEEEEeC--CCCCccHHHHHHHHHHHHhcccccCCcEEEEEEEcc-----cCHHHHHhCC
Confidence 46789999999988655566 999999 999999 99999999885 2247999999998 7899999999
Q ss_pred cc-CceEEEeccchH
Q psy3889 95 LT-PQLLWAFCVADS 108 (243)
Q Consensus 95 V~-~PTi~lF~~~~~ 108 (243)
|+ +||+++|+++..
T Consensus 190 v~~~Pt~~~~~~G~~ 204 (226)
T 1a8l_A 190 VMAVPKIVIQVNGED 204 (226)
T ss_dssp CCSSCEEEEEETTEE
T ss_pred CcccCeEEEEeCCce
Confidence 99 999999974433
No 89
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.48 E-value=3.4e-14 Score=140.64 Aligned_cols=90 Identities=18% Similarity=0.242 Sum_probs=73.0
Q ss_pred CCCceEcChhhHHHHhccCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhcCc
Q psy3889 20 SKGHVSLDTHNFDKILSKFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRGCL 95 (243)
Q Consensus 20 ~~~v~~L~~~nF~~~v~~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~~V 95 (243)
...++.|+..||++.++++++++|.||| |||+|| |.|+++|+.+.+ .+.+++|||+ +++++|++|+|
T Consensus 115 ~~~v~~l~~~~f~~~i~~~~~~lv~Fya--~wC~~C~~~~p~~~~~a~~~~~--~v~~~~vd~~-----~~~~l~~~~~v 185 (780)
T 3apo_A 115 DPEIITLERREFDAAVNSGELWFVNFYS--PGSSHSHDLAPTWREFAKEVDG--LLRIGAVNCG-----DDRMLCRMKGV 185 (780)
T ss_dssp CTTEEECCHHHHHHHHTSSSCEEEEEEC--SSCHHHHHHHHHHHHHHHHTTT--TSEEEEEETT-----TCSSCC-----
T ss_pred CcceeeechHhHHhhhcCCCcEEEEEeC--CCCcchhHhhHHHHHHHHHhcC--ceEEEEEeCC-----CcHHHHHHcCC
Confidence 4579999999999999889999999999 999999 999999999864 5999999998 77899999999
Q ss_pred c-CceEEEec------------cchHhhhhhhHHHHhhhhcc
Q psy3889 96 T-PQLLWAFC------------VADSLNKTLFILIIFFSSIG 124 (243)
Q Consensus 96 ~-~PTi~lF~------------~~~~l~~~~f~~~~i~~~~g 124 (243)
+ +||+++|+ +.++|.+ | +.+..+
T Consensus 186 ~~~Pt~~~~~~g~~~~~~~G~~~~~~l~~--~----l~~~~~ 221 (780)
T 3apo_A 186 NSYPSLFIFRSGMAAVKYNGDRSKESLVA--F----AMQHVR 221 (780)
T ss_dssp ---CEEEEECTTSCCEECCSCSCHHHHHH--H----HHTTSC
T ss_pred ceeeeEEEEeCCcEeeEecCCCCHHHHHH--H----HHHhch
Confidence 9 99999998 5677888 8 665543
No 90
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=99.47 E-value=1.2e-13 Score=132.13 Aligned_cols=97 Identities=15% Similarity=0.143 Sum_probs=82.1
Q ss_pred CCCceEcChhhHHHHh-ccCCeEEEEEEecCCCCCCc----HHHHHHHHHccC-CCCcEEEEEecccCCCcccHHHHhhc
Q psy3889 20 SKGHVSLDTHNFDKIL-SKFHTTLVKFDIAYPYGAKH----EAFLEVAESSKH-QPDFLVAEVGVKDYGERDNEDLAKRG 93 (243)
Q Consensus 20 ~~~v~~L~~~nF~~~v-~~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~-~~~v~vakVd~~d~~~~~n~~l~~~~ 93 (243)
...|++|++++|++.+ +++++|+|.||| |||++| |.|+++++.+.+ ...+.|++|||+ +.++.++|++|
T Consensus 11 ~~~V~~Lt~~~f~~~v~~~~k~vlV~FyA--~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d---~d~~~~l~~~~ 85 (519)
T 3t58_A 11 SDPLTLLDADSVRPTVLGSSSAWAVEFFA--SWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCA---EETNSAVCREF 85 (519)
T ss_dssp TSSSEEECTTTHHHHHSSCSSEEEEEEEC--TTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETT---SGGGHHHHHHT
T ss_pred CCCcEECChHHHHHHHHhCCCeEEEEEEC--CCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECC---ccccHHHHHHc
Confidence 4569999999999988 677999999999 999999 999999999964 457999999995 12689999999
Q ss_pred Ccc-CceEEEec----------------cchHhhhhhhHHHHhhhhc
Q psy3889 94 CLT-PQLLWAFC----------------VADSLNKTLFILIIFFSSI 123 (243)
Q Consensus 94 ~V~-~PTi~lF~----------------~~~~l~~~~f~~~~i~~~~ 123 (243)
+|. +||+++|. +.++|.+ |+.+.+..+.
T Consensus 86 ~V~~~PTl~~f~~g~~~G~~~~~~~g~~~~~~L~~--~l~~~l~~~~ 130 (519)
T 3t58_A 86 NIAGFPTVRFFQAFTKNGSGATLPGAGANVQTLRM--RLIDALESHR 130 (519)
T ss_dssp TCCSBSEEEEECTTCCSCCCEEECCSSCCHHHHHH--HHHHHHTTCC
T ss_pred CCcccCEEEEEcCcccCCCceeEecCCCCHHHHHH--HHHHHHhhcc
Confidence 999 99999997 4567777 8666665543
No 91
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=99.46 E-value=8.1e-14 Score=107.54 Aligned_cols=81 Identities=12% Similarity=0.049 Sum_probs=66.7
Q ss_pred CceEcChhhHHHHhc--cCCeEEEEEEecCC-------CCCCc----HHHHHHHHHccCCCCcEEEEEecccCCC--ccc
Q psy3889 22 GHVSLDTHNFDKILS--KFHTTLVKFDIAYP-------YGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGE--RDN 86 (243)
Q Consensus 22 ~v~~L~~~nF~~~v~--~~k~vlV~FyA~~p-------WC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~--~~n 86 (243)
.+...+.++|++.+. ++++++|.||+ | ||++| |.|+++++.+.+ ++.++.||+++... ..+
T Consensus 6 ~v~~~~~~~~~~~~~~~~~~~v~v~F~a--~~~~~~~~wC~~C~~~~p~l~~~~~~~~~--~~~~~~vd~~~~~~~~d~~ 81 (123)
T 1wou_A 6 EVSVSGFEEFHRAVEQHNGKTIFAYFTG--SKDAGGKSWCPDCVQAEPVVREGLKHISE--GCVFIYCQVGEKPYWKDPN 81 (123)
T ss_dssp EEEEESHHHHHHHHHTTTTSEEEEEEEC--CBCTTCCBSCHHHHHHHHHHHHHGGGCCT--TEEEEEEECCCHHHHHCTT
T ss_pred eEEeccHHHHHHHHHHhCCCEEEEEEEc--cCCCCCCCcCHHHHHhhHHHHHHHHHcCC--CcEEEEEECCCchhhhchh
Confidence 466778999999884 48999999999 9 99999 999999888753 79999999920000 167
Q ss_pred HHHHhhcCcc-CceEEEeccc
Q psy3889 87 EDLAKRGCLT-PQLLWAFCVA 106 (243)
Q Consensus 87 ~~l~~~~~V~-~PTi~lF~~~ 106 (243)
.+++++|+|. +||+++|.+.
T Consensus 82 ~~~~~~~~i~~~Pt~~~~~~~ 102 (123)
T 1wou_A 82 NDFRKNLKVTAVPTLLKYGTP 102 (123)
T ss_dssp CHHHHHHCCCSSSEEEETTSS
T ss_pred HHHHHHCCCCeeCEEEEEcCC
Confidence 8899999999 9999999753
No 92
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=99.18 E-value=5.7e-15 Score=108.63 Aligned_cols=80 Identities=19% Similarity=0.253 Sum_probs=68.9
Q ss_pred ceEcChhhHHHHh-ccCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhcCcc-
Q psy3889 23 HVSLDTHNFDKIL-SKFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRGCLT- 96 (243)
Q Consensus 23 v~~L~~~nF~~~v-~~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~~V~- 96 (243)
+++|+.++|++.+ +++++++|.||+ |||++| |.++++++.+.+ ++.++.||++ .+.+++++|+|.
T Consensus 3 v~~l~~~~~~~~~~~~~~~~~v~f~~--~~C~~C~~~~~~~~~~~~~~~~--~~~~~~v~~~-----~~~~~~~~~~v~~ 73 (106)
T 2yj7_A 3 VIEVTDENFEQEVLKSDKPVLVDFWA--PWCGPCRMIAPIIEELAKEYEG--KVKVVKVNVD-----ENPNTAAQYGIRS 73 (106)
Confidence 6789999999876 778899999999 999999 899999888753 6999999997 788999999999
Q ss_pred CceEEEeccchHhhh
Q psy3889 97 PQLLWAFCVADSLNK 111 (243)
Q Consensus 97 ~PTi~lF~~~~~l~~ 111 (243)
+||+++|+++..+..
T Consensus 74 ~Pt~~~~~~g~~~~~ 88 (106)
T 2yj7_A 74 IPTLLLFKNGQVVDR 88 (106)
Confidence 999999975444433
No 93
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=99.44 E-value=7.6e-14 Score=109.40 Aligned_cols=74 Identities=11% Similarity=0.148 Sum_probs=63.8
Q ss_pred CCCceEcCh-hhHHHHhcc--CCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhh
Q psy3889 20 SKGHVSLDT-HNFDKILSK--FHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKR 92 (243)
Q Consensus 20 ~~~v~~L~~-~nF~~~v~~--~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~ 92 (243)
.+.++++++ ++|++++.. +++++|.||+ |||++| |.|+++++.+ ++.++.||++ .+.+++++
T Consensus 19 ~~~v~~l~~~~~~~~~l~~~~~k~vvv~F~a--~wC~~C~~~~p~l~~l~~~~----~v~~~~vd~~-----~~~~l~~~ 87 (133)
T 3cxg_A 19 QSIYIELKNTGSLNQVFSSTQNSSIVIKFGA--VWCKPCNKIKEYFKNQLNYY----YVTLVDIDVD-----IHPKLNDQ 87 (133)
T ss_dssp TEEEEECCCTTHHHHHHTC-CCSEEEEEEEC--TTCHHHHHTHHHHHGGGGTE----ECEEEEEETT-----TCHHHHHH
T ss_pred CccEEEecChhHHHHHHHhcCCCEEEEEEEC--CCCHHHHHHHHHHHHHHHhc----CEEEEEEecc-----chHHHHHh
Confidence 345888885 899998843 5799999999 999999 8888877665 5899999997 78999999
Q ss_pred cCcc-CceEEEec
Q psy3889 93 GCLT-PQLLWAFC 104 (243)
Q Consensus 93 ~~V~-~PTi~lF~ 104 (243)
|+|+ +||+++|+
T Consensus 88 ~~v~~~Pt~~~~~ 100 (133)
T 3cxg_A 88 HNIKALPTFEFYF 100 (133)
T ss_dssp TTCCSSSEEEEEE
T ss_pred cCCCCCCEEEEEE
Confidence 9999 99999995
No 94
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=99.43 E-value=5.9e-14 Score=132.59 Aligned_cols=78 Identities=18% Similarity=0.170 Sum_probs=69.5
Q ss_pred CCCceEcChhhHHHHhc--cCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCC------CcEEEEEecccCCCcccH
Q psy3889 20 SKGHVSLDTHNFDKILS--KFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQP------DFLVAEVGVKDYGERDNE 87 (243)
Q Consensus 20 ~~~v~~L~~~nF~~~v~--~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~------~v~vakVd~~d~~~~~n~ 87 (243)
...+++|+.++|++++. ++++|||.||| |||++| |.|+++++.+.... ++.|++|||+ +++
T Consensus 22 ~~~V~~Lt~~~F~~~l~~~~~k~VlV~FyA--~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d-----~~~ 94 (470)
T 3qcp_A 22 DSSVVDLSGDDFSRVHRVAPLCPWIVLFYN--DGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCA-----SEV 94 (470)
T ss_dssp CTTEEECSCSCGGGTCTTGGGSCEEEEEEC--TTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETT-----TCH
T ss_pred CCCcEECCHHHHHHHHHhCCCCeEEEEEEC--CCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECC-----CCH
Confidence 45799999999999884 34789999999 999999 99999999986432 4999999998 789
Q ss_pred HHHhhcCcc-CceEEEec
Q psy3889 88 DLAKRGCLT-PQLLWAFC 104 (243)
Q Consensus 88 ~l~~~~~V~-~PTi~lF~ 104 (243)
+++++|+|. +||+++|.
T Consensus 95 ~la~~y~V~~~PTlilf~ 112 (470)
T 3qcp_A 95 DLCRKYDINFVPRLFFFY 112 (470)
T ss_dssp HHHHHTTCCSSCEEEEEE
T ss_pred HHHHHcCCCccCeEEEEE
Confidence 999999999 99999996
No 95
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=99.42 E-value=7.1e-14 Score=107.33 Aligned_cols=79 Identities=11% Similarity=0.142 Sum_probs=67.9
Q ss_pred cCCCceEc-ChhhHHHHhc----cCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHH
Q psy3889 19 LSKGHVSL-DTHNFDKILS----KFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDL 89 (243)
Q Consensus 19 ~~~~v~~L-~~~nF~~~v~----~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l 89 (243)
....++++ +.++|++.+. ++++++|.||+ |||++| |.|+++++.+. ++.++.||++ .+.++
T Consensus 12 ~~~~~~~i~~~~~~~~~l~~~~~~~~~~vv~f~~--~~C~~C~~~~~~l~~~~~~~~---~v~~~~v~~~-----~~~~~ 81 (130)
T 1wmj_A 12 EEGVVIACHNKDEFDAQMTKAKEAGKVVIIDFTA--SWCGPCRFIAPVFAEYAKKFP---GAVFLKVDVD-----ELKEV 81 (130)
T ss_dssp SCSSSBCCSSSHHHHHHHHHHHTTTCBCBEECCS--SSCSCSSSSHHHHHHHHHHCT---TBCCEECCTT-----TSGGG
T ss_pred cCcceEEcCCHHHHHHHHHHHhhcCCEEEEEEEC--CCChhHHHHHHHHHHHHHHCC---CCEEEEEecc-----chHHH
Confidence 34467888 5699999884 48899999999 999999 99999999874 6999999997 78899
Q ss_pred HhhcCcc-CceEEEeccch
Q psy3889 90 AKRGCLT-PQLLWAFCVAD 107 (243)
Q Consensus 90 ~~~~~V~-~PTi~lF~~~~ 107 (243)
+++|+|. +||+++|++..
T Consensus 82 ~~~~~v~~~Pt~~~~~~g~ 100 (130)
T 1wmj_A 82 AEKYNVEAMPTFLFIKDGA 100 (130)
T ss_dssp HHHHTCCSSCCCCBCTTTT
T ss_pred HHHcCCCccceEEEEeCCe
Confidence 9999999 99999987443
No 96
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=99.42 E-value=3.4e-13 Score=117.54 Aligned_cols=78 Identities=10% Similarity=-0.005 Sum_probs=67.5
Q ss_pred CCCceEc-ChhhHHHHhc---cCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHh
Q psy3889 20 SKGHVSL-DTHNFDKILS---KFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAK 91 (243)
Q Consensus 20 ~~~v~~L-~~~nF~~~v~---~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~ 91 (243)
.+.|+++ +..+|.+.|. ++++|+|.||| |||++| |.|.++|..+. ++.|++||++ . .+++.
T Consensus 111 ~G~V~ei~s~~~f~~~v~~~~~~k~VvV~Fya--~wC~~Ck~l~p~l~~La~~~~---~v~f~kVd~d-----~-~~l~~ 179 (245)
T 1a0r_P 111 YGFVYELESGEQFLETIEKEQKITTIVVHIYE--DGIKGCDALNSSLICLAAEYP---MVKFCKIKAS-----N-TGAGD 179 (245)
T ss_dssp CCSEEECCSHHHHHHHHHSSCTTCEEEEEEEC--TTSTTHHHHHHHHHHHHHHCT---TSEEEEEEHH-----H-HCCTT
T ss_pred CCeEEEeCCHHHHHHHHHHhcCCCEEEEEEEC--CCChHHHHHHHHHHHHHHHCC---CCEEEEEeCC-----c-HHHHH
Confidence 3467889 7999999983 37899999999 999999 99999999884 5999999996 3 67899
Q ss_pred hcCcc-CceEEEeccchH
Q psy3889 92 RGCLT-PQLLWAFCVADS 108 (243)
Q Consensus 92 ~~~V~-~PTi~lF~~~~~ 108 (243)
+|+|. +||+++|+++.-
T Consensus 180 ~~~I~~~PTll~~~~G~~ 197 (245)
T 1a0r_P 180 RFSSDVLPTLLVYKGGEL 197 (245)
T ss_dssp SSCTTTCSEEEEEETTEE
T ss_pred HCCCCCCCEEEEEECCEE
Confidence 99999 999999985443
No 97
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.41 E-value=1.5e-13 Score=129.64 Aligned_cols=75 Identities=17% Similarity=0.276 Sum_probs=65.9
Q ss_pred CCceEcChhhHHHHh-ccCCeEEEEEEecCCCCCCc----HHHHHHHHHcc-CCCCcEEEEEecccCCCcccHHHHhhcC
Q psy3889 21 KGHVSLDTHNFDKIL-SKFHTTLVKFDIAYPYGAKH----EAFLEVAESSK-HQPDFLVAEVGVKDYGERDNEDLAKRGC 94 (243)
Q Consensus 21 ~~v~~L~~~nF~~~v-~~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~-~~~~v~vakVd~~d~~~~~n~~l~~~~~ 94 (243)
+.+..|+..||+..+ +++++|+|.||| |||+|| |.|+++++.+. ...++.+++||++ .+. ... |+
T Consensus 358 ~~v~~l~~~~f~~~v~~~~k~vlv~F~a--~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~-----~~~-~~~-~~ 428 (504)
T 2b5e_A 358 SSVFQLVGKNHDEIVNDPKKDVLVLYYA--PWCGHCKRLAPTYQELADTYANATSDVLIAKLDHT-----END-VRG-VV 428 (504)
T ss_dssp CSEEEECTTTHHHHHHCTTCCEEEEEEC--TTCHHHHHHHHHHHHHHHHHHHHCSSCEEEEEEGG-----GCC-CSS-CC
T ss_pred ccceecccccHHHhhccCCCCEEEEEEC--CCChhHHHHhHHHHHHHHHhhccCCcEEEEEecCC-----ccc-ccc-CC
Confidence 568999999999988 678999999999 999999 99999999986 4568999999997 444 334 99
Q ss_pred cc-CceEEEec
Q psy3889 95 LT-PQLLWAFC 104 (243)
Q Consensus 95 V~-~PTi~lF~ 104 (243)
|+ +||+++|+
T Consensus 429 v~~~Pt~~~~~ 439 (504)
T 2b5e_A 429 IEGYPTIVLYP 439 (504)
T ss_dssp CSSSSEEEEEC
T ss_pred ceecCeEEEEe
Confidence 99 99999998
No 98
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=99.40 E-value=3.7e-13 Score=114.95 Aligned_cols=80 Identities=10% Similarity=-0.003 Sum_probs=67.8
Q ss_pred CCceEc-ChhhHHHHhc-c--CCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhh
Q psy3889 21 KGHVSL-DTHNFDKILS-K--FHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKR 92 (243)
Q Consensus 21 ~~v~~L-~~~nF~~~v~-~--~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~ 92 (243)
+.|.++ +..+|.++|. . +++|+|.||+ |||++| |.|+++|..+. ++.|++||++ +++++.+
T Consensus 99 g~v~~i~~~~~f~~~v~~~~~~k~vvV~F~a--~wC~~C~~l~p~l~~la~~~~---~v~f~~vd~~------~~~l~~~ 167 (217)
T 2trc_P 99 GFVYELETGEQFLETIEKEQKVTTIVVNIYE--DGVRGCDALNSSLECLAAEYP---MVKFCKIRAS------NTGAGDR 167 (217)
T ss_dssp CSEEECCSHHHHHHHHHHSCTTCEEEEEEEC--TTSTTHHHHHHHHHHHHTTCT---TSEEEEEEHH------HHTCSTT
T ss_pred CeEEEcCCHHHHHHHHHhcCCCcEEEEEEEC--CCCccHHHHHHHHHHHHHHCC---CeEEEEEECC------cHHHHHH
Confidence 457888 8999999983 3 3899999999 999999 99999998873 7999999994 6789999
Q ss_pred cCcc-CceEEEeccchHhhh
Q psy3889 93 GCLT-PQLLWAFCVADSLNK 111 (243)
Q Consensus 93 ~~V~-~PTi~lF~~~~~l~~ 111 (243)
|+|. +||+++|+++.-+..
T Consensus 168 ~~i~~~PTl~~~~~G~~v~~ 187 (217)
T 2trc_P 168 FSSDVLPTLLVYKGGELISN 187 (217)
T ss_dssp SCGGGCSEEEEEETTEEEEE
T ss_pred CCCCCCCEEEEEECCEEEEE
Confidence 9999 999999985444333
No 99
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.39 E-value=4.1e-13 Score=105.55 Aligned_cols=78 Identities=4% Similarity=-0.082 Sum_probs=65.1
Q ss_pred CCceEcChhhHHHHhcc---CCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhc
Q psy3889 21 KGHVSLDTHNFDKILSK---FHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRG 93 (243)
Q Consensus 21 ~~v~~L~~~nF~~~v~~---~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~ 93 (243)
+.+++++.++|++.+.. +++|+|.||| |||++| |.|+++++.+. ++.|++||++ ++. ++|
T Consensus 10 g~v~~i~~~~~~~~v~~~~~~~~vvv~f~a--~wC~~C~~~~p~l~~la~~~~---~v~~~~vd~~-----~~~---~~~ 76 (135)
T 2dbc_A 10 GELREISGNQYVNEVTNAEKDLWVVIHLYR--SSVPMCLVVNQHLSVLARKFP---ETKFVKAIVN-----SCI---EHY 76 (135)
T ss_dssp CSCEECCHHHHHHHTTTCCSSCEEEEEECC--TTCHHHHHHHHHHHHHHHHCS---SEEEEEECCS-----SSC---SSC
T ss_pred CceEEcCHHHHHHHHHhcCCCCEEEEEEEC--CCChHHHHHHHHHHHHHHHCC---CcEEEEEEhh-----cCc---ccC
Confidence 45889999999998832 3699999999 999999 99999999873 6999999997 332 799
Q ss_pred Ccc-CceEEEeccchHhhh
Q psy3889 94 CLT-PQLLWAFCVADSLNK 111 (243)
Q Consensus 94 ~V~-~PTi~lF~~~~~l~~ 111 (243)
+|. +||+++|+++..+..
T Consensus 77 ~i~~~Pt~~~~~~G~~v~~ 95 (135)
T 2dbc_A 77 HDNCLPTIFVYKNGQIEGK 95 (135)
T ss_dssp CSSCCSEEEEESSSSCSEE
T ss_pred CCCCCCEEEEEECCEEEEE
Confidence 999 999999986554444
No 100
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.38 E-value=2e-12 Score=111.71 Aligned_cols=95 Identities=14% Similarity=0.037 Sum_probs=74.3
Q ss_pred eEcChhhHHHHhc-cCCeEEEEEEecCCCCCCc----HHHHHHHHHcc--CCCCcEEEEEecccCCCcccHHHHhhcCcc
Q psy3889 24 VSLDTHNFDKILS-KFHTTLVKFDIAYPYGAKH----EAFLEVAESSK--HQPDFLVAEVGVKDYGERDNEDLAKRGCLT 96 (243)
Q Consensus 24 ~~L~~~nF~~~v~-~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~--~~~~v~vakVd~~d~~~~~n~~l~~~~~V~ 96 (243)
..+++++++.+.+ .++.++|.||| |||+|| |.|++++..+. +.+++.++.||++ .+++++++|+|+
T Consensus 123 ~~l~~~~~~~~~~~~~~~~vv~F~a--~wC~~C~~~~p~l~~la~~~~~~~~~~v~~~~vd~~-----~~~~~~~~~~V~ 195 (243)
T 2hls_A 123 SGLEDATKEALKSLKGRVHIETIIT--PSCPYCPYAVLLAHMFAYEAWKQGNPVILSEAVEAY-----ENPDIADKYGVM 195 (243)
T ss_dssp CCCCHHHHHHHHHCCSCEEEEEEEC--SSCSSHHHHHHHHHHHHHHHHHTTCCCEEEEEEETT-----TCHHHHHHTTCC
T ss_pred CCCCHHHHHHHHHcCCCcEEEEEEC--CCCCCcHHHHHHHHHHHHHcccccCCcEEEEEEECc-----cCHHHHHHcCCe
Confidence 4578888887763 46678999999 999999 99999999883 2358999999997 789999999999
Q ss_pred -CceEEEec---------cchHhhhhhhHHHHhhhhcccccCcCcc
Q psy3889 97 -PQLLWAFC---------VADSLNKTLFILIIFFSSIGIWIGAVGC 132 (243)
Q Consensus 97 -~PTi~lF~---------~~~~l~~~~f~~~~i~~~~g~~~~~~G~ 132 (243)
+||+++ . +.++|.+ | +++..+......|.
T Consensus 196 ~vPt~~i-~G~~~~~G~~~~~~l~~--~----l~~~~~~~~~~~g~ 234 (243)
T 2hls_A 196 SVPSIAI-NGYLVFVGVPYEEDFLD--Y----VKSAAEGRLTVKGP 234 (243)
T ss_dssp SSSEEEE-TTEEEEESCCCHHHHHH--H----HHHHHTTCCCCCC-
T ss_pred eeCeEEE-CCEEEEeCCCCHHHHHH--H----HHHHhhcccccCCC
Confidence 999987 4 5677888 8 55555544444443
No 101
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.37 E-value=2.3e-12 Score=108.86 Aligned_cols=72 Identities=10% Similarity=0.006 Sum_probs=63.4
Q ss_pred CCceEcChhhHHHHhccCCeE-EEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhcCc
Q psy3889 21 KGHVSLDTHNFDKILSKFHTT-LVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRGCL 95 (243)
Q Consensus 21 ~~v~~L~~~nF~~~v~~~k~v-lV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~~V 95 (243)
..+..|++++|+.+++.++++ +|.||+ |||++| |.|++++..+ +++.++.||++ .+++++++|+|
T Consensus 118 ~~~~~l~~~~~~~~~~~~~~~~~v~F~a--~wC~~C~~~~~~~~~~~~~~---~~v~~~~vd~~-----~~~~l~~~~~v 187 (229)
T 2ywm_A 118 QRKPQLSEKTLELLQVVDIPIEIWVFVT--TSCGYCPSAAVMAWDFALAN---DYITSKVIDAS-----ENQDLAEQFQV 187 (229)
T ss_dssp TTCCSCCHHHHHHHTTCCSCEEEEEEEC--TTCTTHHHHHHHHHHHHHHC---TTEEEEEEEGG-----GCHHHHHHTTC
T ss_pred CCccCCCHHHHHHHHhcCCCeEEEEEEC--CCCcchHHHHHHHHHHHHHC---CCeEEEEEECC-----CCHHHHHHcCC
Confidence 357889999999988555555 889999 999999 8999999887 37999999998 78999999999
Q ss_pred c-CceEEE
Q psy3889 96 T-PQLLWA 102 (243)
Q Consensus 96 ~-~PTi~l 102 (243)
+ +||+++
T Consensus 188 ~~~Pt~~~ 195 (229)
T 2ywm_A 188 VGVPKIVI 195 (229)
T ss_dssp CSSSEEEE
T ss_pred cccCEEEE
Confidence 9 999998
No 102
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=99.36 E-value=6.3e-13 Score=102.27 Aligned_cols=77 Identities=12% Similarity=0.108 Sum_probs=62.8
Q ss_pred CCceEcChhhHHHHh----ccCCeEEEEEEecCCCCCCc----HHH---HHHHHHccCCCCcEEEEEecccCCCcccHHH
Q psy3889 21 KGHVSLDTHNFDKIL----SKFHTTLVKFDIAYPYGAKH----EAF---LEVAESSKHQPDFLVAEVGVKDYGERDNEDL 89 (243)
Q Consensus 21 ~~v~~L~~~nF~~~v----~~~k~vlV~FyA~~pWC~~c----p~~---~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l 89 (243)
...+.++..+|++.+ .++++++|.||+ |||++| |.+ +.+++.+. .++.++.||++ ...+.++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~k~vlv~f~a--~wC~~C~~~~~~~~~~~~~~~~~~--~~~~~~~vd~~---~~~~~~~ 78 (130)
T 2kuc_A 6 ADGIAFRELSFPEALKRAEVEDKLLFVDCFT--TWCGPCKRLSKVVFKDSLVADYFN--RHFVNLKMDME---KGEGVEL 78 (130)
T ss_dssp CCCCCCBCCCHHHHHHHHHHHSSCEEEEECC--TTCTHHHHHHHHGGGCHHHHHHHH--HHSEEEEECSS---STTHHHH
T ss_pred cCCCCcccCCHHHHHHHHHhcCCeEEEEEEC--CCCccHHHHHHHhcCcHHHHHHHh--cCeEEEEEecC---CcchHHH
Confidence 446777889999987 368899999999 999999 777 66666553 26889999986 2247899
Q ss_pred HhhcCcc-CceEEEec
Q psy3889 90 AKRGCLT-PQLLWAFC 104 (243)
Q Consensus 90 ~~~~~V~-~PTi~lF~ 104 (243)
+++|+|. +||+++|.
T Consensus 79 ~~~~~v~~~Pt~~~~d 94 (130)
T 2kuc_A 79 RKKYGVHAYPTLLFIN 94 (130)
T ss_dssp HHHTTCCSSCEEEEEC
T ss_pred HHHcCCCCCCEEEEEC
Confidence 9999999 99999993
No 103
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=99.36 E-value=2.7e-12 Score=100.53 Aligned_cols=74 Identities=11% Similarity=-0.014 Sum_probs=67.4
Q ss_pred CceEcChhhHHHHhccCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhcCcc-
Q psy3889 22 GHVSLDTHNFDKILSKFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRGCLT- 96 (243)
Q Consensus 22 ~v~~L~~~nF~~~v~~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~~V~- 96 (243)
.++++|.+||+++++.+.+|+|.||| + |++| |.++++|+++++ ++.|++||++ ++++++++|||+
T Consensus 7 lv~~~t~~~f~~~~~~~~pv~v~f~a--~-~~~c~~~~p~l~~~A~~~~g--k~~f~~vd~d-----~~~~~a~~~gi~~ 76 (133)
T 2djk_A 7 LIGEIGPETYSDYMSAGIPLAYIFAE--T-AEERKELSDKLKPIAEAQRG--VINFGTIDAK-----AFGAHAGNLNLKT 76 (133)
T ss_dssp CSEECCHHHHHHHHHTTSCEEEEECS--C-SSSHHHHHHHHHHHHHSSTT--TSEEEEECTT-----TTGGGTTTTTCCS
T ss_pred ceeccChHHHHHHhcCCCCEEEEEec--C-hhhHHHHHHHHHHHHHHhCC--eEEEEEEchH-----HhHHHHHHcCCCc
Confidence 47899999999998888899999999 9 7899 999999999865 7999999997 788999999998
Q ss_pred --CceEEEecc
Q psy3889 97 --PQLLWAFCV 105 (243)
Q Consensus 97 --~PTi~lF~~ 105 (243)
+||+++|.+
T Consensus 77 ~~iPtl~i~~~ 87 (133)
T 2djk_A 77 DKFPAFAIQEV 87 (133)
T ss_dssp SSSSEEEEECT
T ss_pred ccCCEEEEEec
Confidence 999999974
No 104
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.30 E-value=4.7e-12 Score=125.26 Aligned_cols=75 Identities=13% Similarity=0.177 Sum_probs=68.6
Q ss_pred CCceEcChhhHHHHhcc---CCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhc
Q psy3889 21 KGHVSLDTHNFDKILSK---FHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRG 93 (243)
Q Consensus 21 ~~v~~L~~~nF~~~v~~---~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~ 93 (243)
+.|+.|++++|++++.. +..++|.||+ |||+|| |.|+++|+.+++ ++.|+.|||+ .+..+|++|
T Consensus 543 ~~v~~l~~~~f~~~v~~~~~~~~~lv~F~a--p~C~~c~~~~p~~~~lA~~~~~--~v~~~~vd~~-----~~~~l~~~~ 613 (780)
T 3apo_A 543 PSVVSLTPSTFNELVKQRKHDEVWMVDFYS--PWSHPSQVLMPEWKRMARTLTG--LINVGSVDCG-----QYHSFCTQE 613 (780)
T ss_dssp CSEEECCHHHHHHHTTTCCTTCCEEEEEEC--TTCHHHHHHHHHHHHHHHHHTT--TSEEEEEETT-----TTHHHHHHT
T ss_pred cceeecCcccHHHHhhccCCCCeEEEEEEC--CCCHHHHHhhHHHHHHHHHhhC--CeEEEEEECc-----chHHHHHHc
Confidence 67999999999999833 5678999999 999999 999999999964 7999999998 789999999
Q ss_pred Ccc-CceEEEec
Q psy3889 94 CLT-PQLLWAFC 104 (243)
Q Consensus 94 ~V~-~PTi~lF~ 104 (243)
+|+ |||+++|+
T Consensus 614 ~v~~~Pti~~~~ 625 (780)
T 3apo_A 614 NVQRYPEIRFYP 625 (780)
T ss_dssp TCCSSSEEEEEC
T ss_pred CCCCCCeEEEEc
Confidence 999 99999997
No 105
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=99.29 E-value=3.1e-12 Score=99.03 Aligned_cols=75 Identities=13% Similarity=0.142 Sum_probs=60.4
Q ss_pred hhHHHHh----ccCCeEEEEEEecCCCCCCc----HHHH--HHHHHccCCCCcEEEEEecccCCCcccHHHHhhcCc---
Q psy3889 29 HNFDKIL----SKFHTTLVKFDIAYPYGAKH----EAFL--EVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRGCL--- 95 (243)
Q Consensus 29 ~nF~~~v----~~~k~vlV~FyA~~pWC~~c----p~~~--~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~~V--- 95 (243)
.+|++.+ .++++|+|.||+ +||++| |.|+ +++..+.+ ++.++.||+++. ..+.+++++|+|
T Consensus 16 ~~~~~~~~~~~~~~k~vlv~f~a--~wC~~C~~~~~~l~~~~~~~~~~~--~~~~~~vd~~~~--~~~~~l~~~~~v~~~ 89 (133)
T 3fk8_A 16 TQVKKALAAGKRTHKPTLLVFGA--NWCTDCRALDKSLRNQKNTALIAK--HFEVVKIDVGNF--DRNLELSQAYGDPIQ 89 (133)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEEC--TTCHHHHHHHHHHTSHHHHHHHHH--HCEEEEEECTTT--TSSHHHHHHTTCGGG
T ss_pred hHHHHHHHHHHhcCCcEEEEEcC--CCCHHHHHHHHHhCCHHHHHHhcC--CEEEEEEeCCcc--cchHHHHHHhCCccC
Confidence 4555544 568999999999 999999 9999 99888853 799999999321 178999999999
Q ss_pred c-CceEEEe-ccchHh
Q psy3889 96 T-PQLLWAF-CVADSL 109 (243)
Q Consensus 96 ~-~PTi~lF-~~~~~l 109 (243)
. +||+++| +++.-+
T Consensus 90 ~~~Pt~~~~d~~G~~~ 105 (133)
T 3fk8_A 90 DGIPAVVVVNSDGKVR 105 (133)
T ss_dssp GCSSEEEEECTTSCEE
T ss_pred CccceEEEECCCCCEE
Confidence 9 9999999 554433
No 106
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=99.29 E-value=3.3e-12 Score=98.67 Aligned_cols=79 Identities=13% Similarity=0.134 Sum_probs=67.0
Q ss_pred CceEc-ChhhHHHHhccCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHH----HHhh
Q psy3889 22 GHVSL-DTHNFDKILSKFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNED----LAKR 92 (243)
Q Consensus 22 ~v~~L-~~~nF~~~v~~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~----l~~~ 92 (243)
....| |.++|++++.++++++|.|+| +|||+| |.|+++++. +++.+++||++ ++++ ++++
T Consensus 7 ~~~~i~s~e~f~~ii~~~~~vvi~kha--twCgpc~~~~~~~e~~~~~----~~v~~~~vdVd-----e~r~~Sn~IA~~ 75 (112)
T 3iv4_A 7 VAIKLSSIDQFEQVIEENKYVFVLKHS--ETCPISANAYDQFNKFLYE----RDMDGYYLIVQ-----QERDLSDYIAKK 75 (112)
T ss_dssp CEEECCSHHHHHHHHHHCSEEEEEEEC--TTCHHHHHHHHHHHHHHHH----HTCCEEEEEGG-----GGHHHHHHHHHH
T ss_pred ceeecCCHHHHHHHHhcCCCEEEEEEC--CcCHhHHHHHHHHHHHhcc----CCceEEEEEee-----cCchhhHHHHHH
Confidence 45566 568899999779999999999 999999 999999873 47999999998 7766 8999
Q ss_pred cCcc--CceEEEeccchHhhh
Q psy3889 93 GCLT--PQLLWAFCVADSLNK 111 (243)
Q Consensus 93 ~~V~--~PTi~lF~~~~~l~~ 111 (243)
|||+ .||+++|++++.+..
T Consensus 76 ~~V~h~sPq~il~k~G~~v~~ 96 (112)
T 3iv4_A 76 TNVKHESPQAFYFVNGEMVWN 96 (112)
T ss_dssp HTCCCCSSEEEEEETTEEEEE
T ss_pred hCCccCCCeEEEEECCEEEEE
Confidence 9999 999999996655443
No 107
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.28 E-value=7.2e-12 Score=105.79 Aligned_cols=71 Identities=6% Similarity=-0.079 Sum_probs=56.8
Q ss_pred hhHHHHh--ccCCeEEEEEEecC---CCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhcCcc-Cc
Q psy3889 29 HNFDKIL--SKFHTTLVKFDIAY---PYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRGCLT-PQ 98 (243)
Q Consensus 29 ~nF~~~v--~~~k~vlV~FyA~~---pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~~V~-~P 98 (243)
+.+++++ +..++|+|.||..+ |||+|| |.|+++|..+.+.+++.+++|||+ .++++|++|+|+ ||
T Consensus 9 ~~l~~~~~~~~~~~v~v~~~~~~~~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~vd~~-----~~~~l~~~~~v~~~P 83 (229)
T 2ywm_A 9 MQLKELAQKEFKEPVSIKLFSQAIGCESCQTAEELLKETVEVIGEAVGQDKIKLDIYSPF-----THKEETEKYGVDRVP 83 (229)
T ss_dssp HHHHHHHHHHCCSCEEEEEECCCTTCGGGGHHHHHHHHHHHHHHHHHCTTTEEEEEECTT-----TCHHHHHHTTCCBSS
T ss_pred HHHHHHHHHhccCCeEEEEEccCCCCcccHHHHHHHHHHHHHHhccCCCCceEEEEecCc-----ccHHHHHHcCCCcCc
Confidence 4566666 34556666666221 899999 899999888754568999999998 799999999999 99
Q ss_pred eEEEec
Q psy3889 99 LLWAFC 104 (243)
Q Consensus 99 Ti~lF~ 104 (243)
|+++|+
T Consensus 84 tl~~~~ 89 (229)
T 2ywm_A 84 TIVIEG 89 (229)
T ss_dssp EEEEES
T ss_pred EEEEEC
Confidence 999996
No 108
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=99.25 E-value=1.3e-11 Score=96.25 Aligned_cols=82 Identities=10% Similarity=0.084 Sum_probs=63.8
Q ss_pred CCCce-EcChhhHHHHhc--cCCeEEEEEEecCCCCCCc----HHH---HHHHHHccCCCCcEEEEEecccCCCcccHHH
Q psy3889 20 SKGHV-SLDTHNFDKILS--KFHTTLVKFDIAYPYGAKH----EAF---LEVAESSKHQPDFLVAEVGVKDYGERDNEDL 89 (243)
Q Consensus 20 ~~~v~-~L~~~nF~~~v~--~~k~vlV~FyA~~pWC~~c----p~~---~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l 89 (243)
...+. ..+.++|+..+. ++++++|.||+ +||++| |.+ .++++.+. ++.++.||+++ ....+.++
T Consensus 10 ~~~f~~~~~~~~~~~~l~~~~~k~vlv~F~a--~wC~~C~~~~~~~~~~~~l~~~~~---~~~~~~vd~~~-~~~~~~~l 83 (134)
T 2fwh_A 10 HLNFTQIKTVDELNQALVEAKGKPVMLDLYA--DWCVACKEFEKYTFSDPQVQKALA---DTVLLQANVTA-NDAQDVAL 83 (134)
T ss_dssp CCCCEECCSHHHHHHHHHHHTTSCEEEEEEC--TTCHHHHHHHHHTTTSHHHHHHTT---TSEEEEEECTT-CCHHHHHH
T ss_pred CCCcEEecCHHHHHHHHHHhcCCcEEEEEEC--CCCHHHHHHHHHhcCCHHHHHHhc---CcEEEEEeCCC-CcchHHHH
Confidence 33455 445688888873 38899999999 999999 666 78888774 59999999942 11267899
Q ss_pred HhhcCcc-CceEEEe-ccch
Q psy3889 90 AKRGCLT-PQLLWAF-CVAD 107 (243)
Q Consensus 90 ~~~~~V~-~PTi~lF-~~~~ 107 (243)
+++|+|. +||+++| +++.
T Consensus 84 ~~~~~v~~~Pt~~~~d~~G~ 103 (134)
T 2fwh_A 84 LKHLNVLGLPTILFFDGQGQ 103 (134)
T ss_dssp HHHTTCCSSSEEEEECTTSC
T ss_pred HHHcCCCCCCEEEEECCCCC
Confidence 9999999 9999999 4443
No 109
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=99.24 E-value=9.8e-12 Score=102.92 Aligned_cols=118 Identities=19% Similarity=0.193 Sum_probs=81.7
Q ss_pred ceEcChhhHHHHhccCCeEEEEEEecCCCCCCc----H-HH--HHHHHHccCCCCcEEEEEecccCCCcccHHHHhhc--
Q psy3889 23 HVSLDTHNFDKILSKFHTTLVKFDIAYPYGAKH----E-AF--LEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRG-- 93 (243)
Q Consensus 23 v~~L~~~nF~~~v~~~k~vlV~FyA~~pWC~~c----p-~~--~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~-- 93 (243)
....+++.|+.....+++|||.||| +||++| | .| .++++.+.. ++++++||.+ ++++++..|
T Consensus 24 W~~~~~ea~~~A~~~~KpVlvdF~A--~WC~~Ck~m~~~~f~~~~va~~l~~--~fv~ikVD~d-----e~~~l~~~y~~ 94 (173)
T 3ira_A 24 WYPWGEEAFEKARKENKPVFLSIGY--STCHWCHMMAHESFEDEEVAGLMNE--AFVSIKVDRE-----ERPDIDNIYMT 94 (173)
T ss_dssp CBCSSHHHHHHHHHHTCCEEEEEEC--TTCHHHHHHHHHTTTCHHHHHHHHH--HCEEEEEETT-----TCHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHhCCCEEEeccc--chhHhhccccccccCCHHHHHHHHh--cCceeeeCCc-----ccCcHHHHHHH
Confidence 4566789999988889999999999 999999 4 34 356666643 7899999997 788999998
Q ss_pred ------Ccc-CceEEEec-cchHhhhhhhHHHHhhhhcccccC------cCccchhhHHHHHHHHhhcHHHHHHHHHHHH
Q psy3889 94 ------CLT-PQLLWAFC-VADSLNKTLFILIIFFSSIGIWIG------AVGCLQDFDRLAKDFIRSASQERKTLLKSAE 159 (243)
Q Consensus 94 ------~V~-~PTi~lF~-~~~~l~~~~f~~~~i~~~~g~~~~------~~G~i~~~d~l~~~f~~~~~~~~~~~l~~~~ 159 (243)
||. +||+++|. ++. .+ | .|+|.+ .+|...-++.+.+.|- ..|.++.+.+.
T Consensus 95 ~~q~~~gv~g~Pt~v~l~~dG~-~v---~--------~~ty~p~~~~~~~~~f~~~L~~v~~~~~----~~~~~~~~~~~ 158 (173)
T 3ira_A 95 VCQIILGRGGWPLNIIMTPGKK-PF---F--------AGTYIPKNTRFNQIGMLELVPRIKEIWE----QQHEEVLDSAE 158 (173)
T ss_dssp HHHHHHSCCCSSEEEEECTTSC-EE---E--------EESSCCSSCBTTBCCHHHHHHHHHHHHH----HSHHHHHHHHH
T ss_pred HHHHHcCCCCCcceeeECCCCC-ce---e--------eeeeCCCCcCCCCCCHHHHHHHHHHHHH----HHHHHHHHHHH
Confidence 999 99999996 433 22 2 233433 3344444455544442 24555666665
Q ss_pred HHHHHh
Q psy3889 160 DLWDEI 165 (243)
Q Consensus 160 ~~~~~~ 165 (243)
++.+.+
T Consensus 159 ~~~~~~ 164 (173)
T 3ira_A 159 KITSTI 164 (173)
T ss_dssp HTCSHH
T ss_pred HHHHHH
Confidence 554444
No 110
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=99.20 E-value=2.1e-11 Score=86.50 Aligned_cols=55 Identities=16% Similarity=0.105 Sum_probs=50.0
Q ss_pred CeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhcCcc-CceEEE
Q psy3889 39 HTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRGCLT-PQLLWA 102 (243)
Q Consensus 39 k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~~V~-~PTi~l 102 (243)
..++|.||+ |||++| |.++++++.+. +++.+..||++ ++++++++|+|+ +||+++
T Consensus 3 ~~~vv~f~~--~~C~~C~~~~~~l~~~~~~~~--~~~~~~~vd~~-----~~~~~~~~~~v~~~Pt~~~ 62 (85)
T 1fo5_A 3 KVKIELFTS--PMCPHCPAAKRVVEEVANEMP--DAVEVEYINVM-----ENPQKAMEYGIMAVPTIVI 62 (85)
T ss_dssp CEEEEEEEC--CCSSCCCTHHHHHHHHHHHCS--SSEEEEEEESS-----SSCCTTTSTTTCCSSEEEE
T ss_pred ceEEEEEeC--CCCCchHHHHHHHHHHHHHcC--CceEEEEEECC-----CCHHHHHHCCCcccCEEEE
Confidence 578999999 999999 99999999885 37999999997 678899999999 999988
No 111
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=99.19 E-value=1.8e-11 Score=100.53 Aligned_cols=74 Identities=9% Similarity=-0.024 Sum_probs=62.7
Q ss_pred ceEcChhhHHHHh-ccCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhcC---
Q psy3889 23 HVSLDTHNFDKIL-SKFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRGC--- 94 (243)
Q Consensus 23 v~~L~~~nF~~~v-~~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~~--- 94 (243)
.+.+++..+..+. .++++++|.||| +|||+| |.++++++.+. ++.|..||++ ++++++.+|.
T Consensus 38 ~~~~~~~~~~~l~~~~~k~vvv~F~A--~WC~pC~~~~P~l~~l~~~~~---~v~~~~v~~d-----~~~~~~~~~~~~~ 107 (167)
T 1z6n_A 38 SNGLPSALTERLQRIERRYRLLVAGE--MWCPDCQINLAALDFAQRLQP---NIELAIISKG-----RAEDDLRQRLALE 107 (167)
T ss_dssp HHCCCHHHHHHHHTCCSCEEEEEECC--TTCHHHHHHHHHHHHHHHHCT---TEEEEEECHH-----HHHHHTTTTTTCS
T ss_pred ccCCCHHHHHHHHHhCCCEEEEEEEC--CCChhHHHHHHHHHHHHHHCC---CcEEEEEECC-----CCHHHHHHHHHcC
Confidence 3567777777665 357899999999 999999 99999998763 6999999997 7899999997
Q ss_pred cc-CceEEEeccc
Q psy3889 95 LT-PQLLWAFCVA 106 (243)
Q Consensus 95 V~-~PTi~lF~~~ 106 (243)
|. +||+++|.+.
T Consensus 108 v~~iPt~i~~~~~ 120 (167)
T 1z6n_A 108 RIAIPLVLVLDEE 120 (167)
T ss_dssp SCCSSEEEEECTT
T ss_pred CCCcCeEEEECCC
Confidence 99 9999999854
No 112
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=99.18 E-value=2.5e-11 Score=86.16 Aligned_cols=54 Identities=13% Similarity=0.046 Sum_probs=49.2
Q ss_pred eEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhcCcc-CceEEE
Q psy3889 40 TTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRGCLT-PQLLWA 102 (243)
Q Consensus 40 ~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~~V~-~PTi~l 102 (243)
.++|.||+ |||++| |.++++++.+.+ ++.+..||++ ++++++++|+|+ +||+++
T Consensus 3 ~~vv~f~~--~~C~~C~~~~~~l~~~~~~~~~--~~~~~~vd~~-----~~~~~~~~~~v~~~Pt~~~ 61 (85)
T 1nho_A 3 VNIEVFTS--PTCPYCPMAIEVVDEAKKEFGD--KIDVEKIDIM-----VDREKAIEYGLMAVPAIAI 61 (85)
T ss_dssp CCEEEESC--SSSCCSTTHHHHHHHHHHHHCS--SCCEEEECTT-----TCGGGGGGTCSSCSSEEEE
T ss_pred EEEEEEEC--CCCcchHHHHHHHHHHHHHhcC--CeEEEEEECC-----CCHHHHHhCCceeeCEEEE
Confidence 46899999 999999 999999998853 7999999997 788999999999 999988
No 113
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.18 E-value=6.5e-11 Score=99.39 Aligned_cols=69 Identities=14% Similarity=0.022 Sum_probs=57.2
Q ss_pred hhhHHHHh-c--cCCeEEEEEEecCC-CCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcc--cHHHHhhcCcc-
Q psy3889 28 THNFDKIL-S--KFHTTLVKFDIAYP-YGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERD--NEDLAKRGCLT- 96 (243)
Q Consensus 28 ~~nF~~~v-~--~~k~vlV~FyA~~p-WC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~--n~~l~~~~~V~- 96 (243)
...+++.+ . +++.++|.||+ | ||++| |.|+++|+. .+++.+++|||+ + ++++|++|+|+
T Consensus 9 ~~~~~~~~~~~~~~~v~lv~f~~--~~~C~~C~~~~~~~~~la~~---~~~v~~~~vd~~-----~~~~~~~~~~~~v~~ 78 (226)
T 1a8l_A 9 KKVIKEEFFSKMVNPVKLIVFVR--KDHCQYCDQLKQLVQELSEL---TDKLSYEIVDFD-----TPEGKELAKRYRIDR 78 (226)
T ss_dssp HHHHHHHTGGGCCSCEEEEEEEC--SSSCTTHHHHHHHHHHHHTT---CTTEEEEEEETT-----SHHHHHHHHHTTCCS
T ss_pred HHHHHHHHHHhcCCCeEEEEEec--CCCCchhHHHHHHHHHHHhh---CCceEEEEEeCC-----CcccHHHHHHcCCCc
Confidence 45666666 2 45677899999 9 99999 899998854 347999999997 6 89999999999
Q ss_pred CceEEEeccc
Q psy3889 97 PQLLWAFCVA 106 (243)
Q Consensus 97 ~PTi~lF~~~ 106 (243)
+||+++|++.
T Consensus 79 ~Pt~~~~~~g 88 (226)
T 1a8l_A 79 APATTITQDG 88 (226)
T ss_dssp SSEEEEEETT
T ss_pred CceEEEEcCC
Confidence 9999999743
No 114
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=99.16 E-value=2.2e-11 Score=98.47 Aligned_cols=73 Identities=10% Similarity=0.084 Sum_probs=57.6
Q ss_pred ceEcChhhHHHHh----ccCCeEEEEEEecCCCCCCcHHH-------HHHHHHccCCCCcEEEEEecccCCCcccHHH--
Q psy3889 23 HVSLDTHNFDKIL----SKFHTTLVKFDIAYPYGAKHEAF-------LEVAESSKHQPDFLVAEVGVKDYGERDNEDL-- 89 (243)
Q Consensus 23 v~~L~~~nF~~~v----~~~k~vlV~FyA~~pWC~~cp~~-------~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l-- 89 (243)
...++..+|++.+ .++++|+|.||| +||++|-.+ .++.+.+.. ++.++.||++ ++.++
T Consensus 28 ~~~~~~~~~~~~~~~a~~~gk~vlv~F~A--~WC~~C~~~~~~~~~~~~~~~~~~~--~~~~v~v~~d-----~~~~~~~ 98 (172)
T 3f9u_A 28 EVHAKFDDYDLGMEYARQHNKPVMLDFTG--YGCVNCRKMELAVWTDPKVSSIINN--DYVLITLYVD-----NKTPLTE 98 (172)
T ss_dssp CCCCCBSCHHHHHHHHHHTTCCEEEEEEC--TTCHHHHHHHHHTTTSHHHHHHHHH--HCEEEEEETT-----CCCEEEE
T ss_pred ccccchhhHHHHHHHHHHcCCeEEEEEEC--CCCHHHHHHHHHhcCCHHHHHHhcC--CEEEEEEecC-----cccccch
Confidence 4566778888876 568999999999 999999433 677776643 7999999997 23322
Q ss_pred ------------------------HhhcCcc-CceEEEec
Q psy3889 90 ------------------------AKRGCLT-PQLLWAFC 104 (243)
Q Consensus 90 ------------------------~~~~~V~-~PTi~lF~ 104 (243)
+.+|+|. +||+++|.
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~Pt~~lid 138 (172)
T 3f9u_A 99 PVKIMENGTERTLRTVGDKWSYLQRVKFGANAQPFYVLID 138 (172)
T ss_dssp EEEEEETTEEEEEEEHHHHHHHHHHHHHSCCCSSEEEEEC
T ss_pred hhhhhhcchhhhhhhhhhhhhHHHHHHcCCCCcceEEEEC
Confidence 7899999 99999994
No 115
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=99.11 E-value=1.8e-11 Score=92.97 Aligned_cols=54 Identities=7% Similarity=-0.070 Sum_probs=42.5
Q ss_pred CCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCc--ccHHHHhhcCcc-CceEEE
Q psy3889 38 FHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGER--DNEDLAKRGCLT-PQLLWA 102 (243)
Q Consensus 38 ~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~--~n~~l~~~~~V~-~PTi~l 102 (243)
++.++|.||| |||++| |.|+++++.+. .|||+ .+.. ++++++++|+|+ +||+++
T Consensus 12 ~k~~vV~F~A--~WC~~C~~~~p~~~~~a~~~~--------~v~~~-~~~~~~~~~~l~~~~~V~~~PT~~i 72 (106)
T 3kp8_A 12 RQIGGTMYGA--YWCPHCQDQKELFGAAFDQVP--------YVECS-PNGPGTPQAQECTEAGITSYPTWII 72 (106)
T ss_dssp HHHTCEEEEC--TTCHHHHHHHHHHGGGGGGSC--------EEESC-TTCTTSCCCHHHHHTTCCSSSEEEE
T ss_pred CCCEEEEEEC--CCCHHHHHHHHHHHHHHHhCC--------EEEEe-cccccchhHHHHHHcCCeEeCEEEE
Confidence 4567899999 999999 88888886652 56664 1222 578999999999 999887
No 116
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=98.69 E-value=8.8e-12 Score=95.93 Aligned_cols=70 Identities=16% Similarity=0.133 Sum_probs=57.2
Q ss_pred hhhHHHHhccCCeEEEEEEecCCCCCCc----HHH---HHHHHHccCCCCcEEEEEecccCCCcccHHHHhhcCcc-Cce
Q psy3889 28 THNFDKILSKFHTTLVKFDIAYPYGAKH----EAF---LEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRGCLT-PQL 99 (243)
Q Consensus 28 ~~nF~~~v~~~k~vlV~FyA~~pWC~~c----p~~---~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~~V~-~PT 99 (243)
.+.++.....++++||.||+ |||++| |.+ +++++.+.. ++.++.||++ ..++.+++++|+|. +||
T Consensus 9 ~~~~~~~~~~~k~vlv~f~a--~wC~~C~~~~~~~~~~~~~~~~~~~--~~~~~~vd~~---~~~~~~~~~~~~v~~~Pt 81 (130)
T 2lst_A 9 PEALALAQAHGRMVMVYFHS--EHCPYCQQMNTFVLSDPGVSRLLEA--RFVVASVSVD---TPEGQELARRYRVPGTPT 81 (130)
Confidence 44555556678899999999 999999 778 888877643 6899999995 22578899999999 999
Q ss_pred EEEec
Q psy3889 100 LWAFC 104 (243)
Q Consensus 100 i~lF~ 104 (243)
+++|.
T Consensus 82 ~~~~d 86 (130)
T 2lst_A 82 FVFLV 86 (130)
Confidence 99994
No 117
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=99.07 E-value=2.4e-11 Score=98.56 Aligned_cols=74 Identities=11% Similarity=0.010 Sum_probs=56.7
Q ss_pred hhHHHHhccCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHH-HHhhcCc--c-CceE
Q psy3889 29 HNFDKILSKFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNED-LAKRGCL--T-PQLL 100 (243)
Q Consensus 29 ~nF~~~v~~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~-l~~~~~V--~-~PTi 100 (243)
.+|+....++++|+|.||| +||++| |.|+++++.+.. ++.|+.||++ .+.+ ++.+|++ . +||+
T Consensus 37 ~~~~~~~~~~k~vlv~F~a--~WC~~C~~~~p~l~~~~~~~~~--~~~~~~v~~d-----~~~~~~~~~~~~~~~~~Pt~ 107 (164)
T 1sen_A 37 DGKKEAAASGLPLMVIIHK--SWCGACKALKPKFAESTEISEL--SHNFVMVNLE-----DEEEPKDEDFSPDGGYIPRI 107 (164)
T ss_dssp HHHHHHHHHTCCEEEEEEC--TTCHHHHHHHHHHHTCHHHHHH--HTTSEEEEEE-----GGGSCSCGGGCTTCSCSSEE
T ss_pred HHHHHHHhcCCeEEEEEEC--CCCHHHHHHHHHHHHHHHHhhc--CCeEEEEEec-----CCchHHHHHhcccCCcCCeE
Confidence 5677667788999999999 999999 888887766532 4667788886 4444 7888888 7 9999
Q ss_pred EEe-ccchHhhh
Q psy3889 101 WAF-CVADSLNK 111 (243)
Q Consensus 101 ~lF-~~~~~l~~ 111 (243)
++| +++.-+..
T Consensus 108 ~~~d~~G~~~~~ 119 (164)
T 1sen_A 108 LFLDPSGKVHPE 119 (164)
T ss_dssp EEECTTSCBCTT
T ss_pred EEECCCCCEEEE
Confidence 999 55544444
No 118
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=99.03 E-value=6.5e-10 Score=86.15 Aligned_cols=63 Identities=10% Similarity=0.116 Sum_probs=53.0
Q ss_pred cCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcc-----------------------cHHH
Q psy3889 37 KFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERD-----------------------NEDL 89 (243)
Q Consensus 37 ~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~-----------------------n~~l 89 (243)
++++++|.||+ +||++| |.+.++++.+....++.+..|+++. .. +..+
T Consensus 32 ~gk~vll~F~~--~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~---~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 106 (148)
T 3fkf_A 32 RNRYLLLNFWA--SWCDPQPEANAELKRLNKEYKKNKNFAMLGISLDI---DREAWETAIKKDTLSWDQVCDFTGLSSET 106 (148)
T ss_dssp TTSEEEEEEEC--GGGCCCHHHHHHHHHHHHHTTTCTTEEEEEEECCS---CHHHHHHHHHHTTCCSEEECCSCGGGCHH
T ss_pred CCcEEEEEEEC--CCCHHHHHHhHHHHHHHHHhcCCCCeEEEEEECCC---CHHHHHHHHHHcCCCceEEEccCCcchHH
Confidence 67899999999 999999 9999999998334569999998862 12 5589
Q ss_pred HhhcCcc-CceEEEec
Q psy3889 90 AKRGCLT-PQLLWAFC 104 (243)
Q Consensus 90 ~~~~~V~-~PTi~lF~ 104 (243)
+++|+|. +||++++.
T Consensus 107 ~~~~~v~~~P~~~lid 122 (148)
T 3fkf_A 107 AKQYAILTLPTNILLS 122 (148)
T ss_dssp HHHTTCCSSSEEEEEC
T ss_pred HHhcCCCCcCEEEEEC
Confidence 9999999 99999884
No 119
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=99.03 E-value=5.4e-10 Score=86.46 Aligned_cols=77 Identities=13% Similarity=0.016 Sum_probs=60.4
Q ss_pred eEcChhhHHHHhccCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCC----------------
Q psy3889 24 VSLDTHNFDKILSKFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGE---------------- 83 (243)
Q Consensus 24 ~~L~~~nF~~~v~~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~---------------- 83 (243)
..++..++.....++++++|.||+ +||++| |.+.++++.+.. ++.+..|+++..+.
T Consensus 15 ~~~~g~~~~~~~~~gk~~lv~f~~--~~C~~C~~~~~~l~~l~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 90 (148)
T 2b5x_A 15 AWLNGEVTREQLIGEKPTLIHFWS--ISCHLCKEAMPQVNEFRDKYQD--QLNVVAVHMPRSEDDLDPGKIKETAAEHDI 90 (148)
T ss_dssp EEESCCCCHHHHTTTSCEEEEEEC--TTCHHHHHHHHHHHHHHHHHTT--TSEEEEEECCCSTTTSSHHHHHHHHHHTTC
T ss_pred ccccCcccchhhcCCCEEEEEEEc--CCCHHHHHHhHHHHHHHHHhcC--CcEEEEEEcCCCccccCHHHHHHHHHHcCC
Confidence 456666666555567899999999 999999 899999998854 39999999752110
Q ss_pred ------cccHHHHhhcCcc-CceEEEec
Q psy3889 84 ------RDNEDLAKRGCLT-PQLLWAFC 104 (243)
Q Consensus 84 ------~~n~~l~~~~~V~-~PTi~lF~ 104 (243)
..+.+++++|+|. +||++++.
T Consensus 91 ~~~~~~d~~~~~~~~~~v~~~P~~~lid 118 (148)
T 2b5x_A 91 TQPIFVDSDHALTDAFENEYVPAYYVFD 118 (148)
T ss_dssp CSCEEECSSCHHHHHTCCCCSSEEEEEC
T ss_pred CcceEECCchhHHHHhCCCCCCEEEEEC
Confidence 1457899999999 99999983
No 120
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.00 E-value=1.5e-09 Score=97.53 Aligned_cols=92 Identities=16% Similarity=0.122 Sum_probs=75.9
Q ss_pred CCCceEcChhhHHHHhc-cCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhcC
Q psy3889 20 SKGHVSLDTHNFDKILS-KFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRGC 94 (243)
Q Consensus 20 ~~~v~~L~~~nF~~~v~-~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~~ 94 (243)
...+.+++++||.++.. ..+.++|.||+ +||++| |.|+++|+.+++ .+.|+.|||+ +.+++.++++||
T Consensus 116 ~p~v~~~~~~~~~~~~~~~~~~~~v~F~~--~~~~~~~~~~~~~~~~A~~~~~--~i~f~~vd~~---~~~~~~~~~~fg 188 (361)
T 3uem_A 116 LPLVIEFTEQTAPKIFGGEIKTHILLFLP--KSVSDYDGKLSNFKTAAESFKG--KILFIFIDSD---HTDNQRILEFFG 188 (361)
T ss_dssp SCSEEECSTTTHHHHHSCSCCEEEEEECC--SSSSSHHHHHHHHHHHHGGGTT--TCEEEEECTT---SGGGHHHHHHTT
T ss_pred CCcceecCcccHHHHhcCCCCcEEEEEEe--CCchhHHHHHHHHHHHHHHccC--ceEEEEecCC---hHHHHHHHHHcC
Confidence 45689999999999984 45678999999 999999 899999999965 6999999996 224799999999
Q ss_pred cc---CceEEEec---------------cchHhhhhhhHHHHhh
Q psy3889 95 LT---PQLLWAFC---------------VADSLNKTLFILIIFF 120 (243)
Q Consensus 95 V~---~PTi~lF~---------------~~~~l~~~~f~~~~i~ 120 (243)
|+ +||+.+|. +.++|.+ |+...++
T Consensus 189 i~~~~~P~~~~~~~~~~~~ky~~~~~~~~~~~l~~--fi~~~l~ 230 (361)
T 3uem_A 189 LKKEECPAVRLITLEEEMTKYKPESEELTAERITE--FCHRFLE 230 (361)
T ss_dssp CCTTTCSEEEEEECC--CCEECCSSCCCCHHHHHH--HHHHHHT
T ss_pred CCccCCccEEEEEcCCcccccCCCccccCHHHHHH--HHHHHhc
Confidence 96 99999986 4566777 7444443
No 121
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=98.97 E-value=2.6e-09 Score=84.05 Aligned_cols=64 Identities=19% Similarity=0.140 Sum_probs=52.6
Q ss_pred cCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcc---------------------cHHHHh
Q psy3889 37 KFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERD---------------------NEDLAK 91 (243)
Q Consensus 37 ~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~---------------------n~~l~~ 91 (243)
.+++++|.||+ +||++| |.+.++.+.+.. .++.|..|++++ +... +..+++
T Consensus 28 ~gk~vll~F~a--~~C~~C~~~~~~l~~l~~~~~~-~~~~vv~v~~d~-~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 103 (152)
T 2lrn_A 28 KGKYVLVDFWF--AGCSWCRKETPYLLKTYNAFKD-KGFTIYGVSTDR-REEDWKKAIEEDKSYWNQVLLQKDDVKDVLE 103 (152)
T ss_dssp TTSEEEEEEEC--TTCTTHHHHHHHHHHHHHHHTT-TTEEEEEEECCS-CHHHHHHHHHHHTCCSEEEEECHHHHHHHHH
T ss_pred CCCEEEEEEEC--CCChhHHHHHHHHHHHHHHhcc-CCeEEEEEEccC-CHHHHHHHHHHhCCCCeEEecccchhHHHHH
Confidence 57899999999 999999 889999988853 469999999862 0000 578999
Q ss_pred hcCcc-CceEEEec
Q psy3889 92 RGCLT-PQLLWAFC 104 (243)
Q Consensus 92 ~~~V~-~PTi~lF~ 104 (243)
+|+|. +||++++.
T Consensus 104 ~~~v~~~P~~~lid 117 (152)
T 2lrn_A 104 SYCIVGFPHIILVD 117 (152)
T ss_dssp HTTCCSSCEEEEEC
T ss_pred HhCCCcCCeEEEEC
Confidence 99999 99999884
No 122
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=98.95 E-value=4.7e-10 Score=89.68 Aligned_cols=72 Identities=13% Similarity=0.085 Sum_probs=54.8
Q ss_pred hhHHHHh----ccCCeEEEEEE-ecCCCCCCc----HHH---HHHHHHccCCCCcEEEEEecccCCC------cccHHHH
Q psy3889 29 HNFDKIL----SKFHTTLVKFD-IAYPYGAKH----EAF---LEVAESSKHQPDFLVAEVGVKDYGE------RDNEDLA 90 (243)
Q Consensus 29 ~nF~~~v----~~~k~vlV~Fy-A~~pWC~~c----p~~---~~lA~~~~~~~~v~vakVd~~d~~~------~~n~~l~ 90 (243)
.+|++.+ .++++++|.|| + +||++| |.+ .++++.+. .++.++.||+++... ..+.+++
T Consensus 34 ~~~~~~~~~a~~~gk~vlv~F~ga--~wC~~C~~~~p~l~~~~~~~~~~~--~~~~~v~vd~~~~~~~~~~~~~~~~~l~ 109 (154)
T 2ju5_A 34 ESYAEALEHSKQDHKPIGLFFTGS--DWCMWCIKMQDQILQSSEFKHFAG--VHLHMVEVDFPQKNHQPEEQRQKNQELK 109 (154)
T ss_dssp ECHHHHHHHHHHHCCCEEEEEECT--TTCHHHHHHHHHTTTSHHHHHHHH--HHCEEEEEECCSSCCCCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHhCCCeEEEEEeCC--CCCHhHHHHHHHHhcCHHHHHHhc--CcEEEEEecCccccCCChhhHhhHHHHH
Confidence 4566654 45889999999 9 999999 777 67766543 378999999962110 1356899
Q ss_pred hhcCcc-CceEEEec
Q psy3889 91 KRGCLT-PQLLWAFC 104 (243)
Q Consensus 91 ~~~~V~-~PTi~lF~ 104 (243)
++|+|. +||+++|.
T Consensus 110 ~~~~v~~~Pt~~~~d 124 (154)
T 2ju5_A 110 AQYKVTGFPELVFID 124 (154)
T ss_dssp HHTTCCSSSEEEEEC
T ss_pred HHcCCCCCCEEEEEc
Confidence 999999 99999994
No 123
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=98.93 E-value=2e-09 Score=75.11 Aligned_cols=50 Identities=14% Similarity=-0.072 Sum_probs=43.3
Q ss_pred EEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhcCcc-CceEEE
Q psy3889 41 TLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRGCLT-PQLLWA 102 (243)
Q Consensus 41 vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~~V~-~PTi~l 102 (243)
..|.||+ |||++| |.++++++.+.. ++.+++|| +.+++++|+|+ +||+++
T Consensus 2 ~~v~f~a--~wC~~C~~~~~~l~~~~~~~~~--~~~~~~v~--------~~~~~~~~~v~~~Pt~~~ 56 (77)
T 1ilo_A 2 MKIQIYG--TGCANCQMLEKNAREAVKELGI--DAEFEKIK--------EMDQILEAGLTALPGLAV 56 (77)
T ss_dssp EEEEEEC--SSSSTTHHHHHHHHHHHHHTTC--CEEEEEEC--------SHHHHHHHTCSSSSCEEE
T ss_pred cEEEEEc--CCChhHHHHHHHHHHHHHHcCC--ceEEEEec--------CHHHHHHCCCCcCCEEEE
Confidence 3589999 999999 899999988753 68888886 47899999999 999987
No 124
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=98.93 E-value=1e-09 Score=83.56 Aligned_cols=64 Identities=13% Similarity=-0.052 Sum_probs=52.2
Q ss_pred ccCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCC-----------C-------cccHHHHhhc
Q psy3889 36 SKFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYG-----------E-------RDNEDLAKRG 93 (243)
Q Consensus 36 ~~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~-----------~-------~~n~~l~~~~ 93 (243)
..+++++|.||+ +||++| |.+.++++.+. ++.++.|++++-. - ..+..++++|
T Consensus 23 ~~~k~~ll~f~~--~~C~~C~~~~~~l~~~~~~~~---~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 97 (136)
T 1zzo_A 23 LLGKPAVLWFWA--PWCPTCQGEAPVVGQVAASHP---EVTFVGVAGLDQVPAMQEFVNKYPVKTFTQLADTDGSVWANF 97 (136)
T ss_dssp GTTSCEEEEEEC--TTCHHHHHHHHHHHHHHHHCT---TSEEEEEECSSCHHHHHHHHHHTTCTTSEEEECTTCHHHHHT
T ss_pred hCCCeEEEEEEc--CCChhHHHHHHHHHHHHHHcC---CeEEEEEeCCCCHHHHHHHHHHcCCCceEEEEcCCcHHHHHc
Confidence 367899999999 999999 88999988874 7999999985200 0 1357899999
Q ss_pred Ccc-CceEEEec
Q psy3889 94 CLT-PQLLWAFC 104 (243)
Q Consensus 94 ~V~-~PTi~lF~ 104 (243)
+|. +||++++.
T Consensus 98 ~i~~~P~~~~id 109 (136)
T 1zzo_A 98 GVTQQPAYAFVD 109 (136)
T ss_dssp TCCSSSEEEEEC
T ss_pred CCCCCceEEEEC
Confidence 999 99999985
No 125
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=98.93 E-value=1.6e-09 Score=84.35 Aligned_cols=66 Identities=12% Similarity=0.095 Sum_probs=53.8
Q ss_pred cCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCC-------------------cccHHHHhhc
Q psy3889 37 KFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGE-------------------RDNEDLAKRG 93 (243)
Q Consensus 37 ~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~-------------------~~n~~l~~~~ 93 (243)
++++|+|.||+ +||++| |.+.++++.+....++.+..|++++..+ ..+..++++|
T Consensus 27 ~gk~vll~F~a--~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 104 (144)
T 1i5g_A 27 AGKTVFFYFSA--SWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFKDYYAKMPWLALPFEDRKGMEFLTTGF 104 (144)
T ss_dssp TTSEEEEEEEC--TTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHT
T ss_pred CCCEEEEEEEC--CCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCccccccCchHHHHHHHHHc
Confidence 57899999999 999999 8999999998644589999999862000 1246899999
Q ss_pred Ccc-CceEEEec
Q psy3889 94 CLT-PQLLWAFC 104 (243)
Q Consensus 94 ~V~-~PTi~lF~ 104 (243)
+|. +||++++.
T Consensus 105 ~v~~~P~~~lid 116 (144)
T 1i5g_A 105 DVKSIPTLVGVE 116 (144)
T ss_dssp TCCSSSEEEEEE
T ss_pred CCCCCCEEEEEE
Confidence 999 99999984
No 126
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=98.92 E-value=1.8e-09 Score=84.47 Aligned_cols=65 Identities=12% Similarity=0.082 Sum_probs=54.0
Q ss_pred cCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCC--------------------cccHHHHhh
Q psy3889 37 KFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGE--------------------RDNEDLAKR 92 (243)
Q Consensus 37 ~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~--------------------~~n~~l~~~ 92 (243)
++++++|.||+ +||++| |.+.++++.+....++.+..|++++ +. ..+..++++
T Consensus 27 ~gk~vll~F~a--~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d~-~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 103 (146)
T 1o8x_A 27 AGKLVFFYFSA--SWCPPARGFTPQLIEFYDKFHESKNFEVVFCTWDE-EEDGFAGYFAKMPWLAVPFAQSEAVQKLSKH 103 (146)
T ss_dssp TTCEEEEEEEC--TTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCC-SHHHHHHHHTTCSSEECCGGGHHHHHHHHHH
T ss_pred CCCEEEEEEEc--cCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCCC-CHHHHHHHHHHCCceeeccchhhHHHHHHHH
Confidence 57899999999 999999 8999999998644589999999862 10 124689999
Q ss_pred cCcc-CceEEEec
Q psy3889 93 GCLT-PQLLWAFC 104 (243)
Q Consensus 93 ~~V~-~PTi~lF~ 104 (243)
|+|. +||++++.
T Consensus 104 ~~v~~~Pt~~lid 116 (146)
T 1o8x_A 104 FNVESIPTLIGVD 116 (146)
T ss_dssp TTCCSSSEEEEEE
T ss_pred hCCCCCCEEEEEE
Confidence 9999 99999995
No 127
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=98.92 E-value=1.9e-09 Score=82.97 Aligned_cols=65 Identities=11% Similarity=0.118 Sum_probs=53.3
Q ss_pred cCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCC--------------------cccHHHHhh
Q psy3889 37 KFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGE--------------------RDNEDLAKR 92 (243)
Q Consensus 37 ~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~--------------------~~n~~l~~~ 92 (243)
.+++++|.||+ +||++| |.+.++++.+.. .++.+..|+++..++ ..+..++++
T Consensus 33 ~gk~~ll~f~~--~~C~~C~~~~~~l~~~~~~~~~-~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 109 (145)
T 3erw_A 33 KGQKTILHFWT--SWCPPCKKELPQFQSFYDAHPS-DSVKLVTVNLVNSEQNQQVVEDFIKANKLTFPIVLDSKGELMKE 109 (145)
T ss_dssp TTSEEEEEEEC--SSCHHHHHHHHHHHHHHHHCCC-SSEEEEEEECGGGSSCHHHHHHHHHHTTCCSCEEECSSSHHHHH
T ss_pred CCCEEEEEEEC--CCCHHHHHHHHHHHHHHHHcCC-CCEEEEEEEccCCcCCHHHHHHHHHHcCCceeEEEcCchhHHHh
Confidence 67899999999 999999 899999998853 479999999862110 135689999
Q ss_pred cCcc-CceEEEec
Q psy3889 93 GCLT-PQLLWAFC 104 (243)
Q Consensus 93 ~~V~-~PTi~lF~ 104 (243)
|+|. +||++++.
T Consensus 110 ~~v~~~P~~~lid 122 (145)
T 3erw_A 110 YHIITIPTSFLLN 122 (145)
T ss_dssp TTCCEESEEEEEC
T ss_pred cCcCccCeEEEEc
Confidence 9999 99999984
No 128
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=98.91 E-value=8.4e-10 Score=84.30 Aligned_cols=63 Identities=8% Similarity=0.046 Sum_probs=51.9
Q ss_pred cCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCC-----------------CcccHHHHhhcCc
Q psy3889 37 KFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYG-----------------ERDNEDLAKRGCL 95 (243)
Q Consensus 37 ~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~-----------------~~~n~~l~~~~~V 95 (243)
.+++++|.||+ +||++| |.+.++++.+. ++.++.|++++-. ...+.+++++|+|
T Consensus 23 ~~k~~lv~f~~--~~C~~C~~~~~~l~~~~~~~~---~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i 97 (136)
T 1lu4_A 23 QGKPAVLWFWT--PWCPFCNAEAPSLSQVAAANP---AVTFVGIATRADVGAMQSFVSKYNLNFTNLNDADGVIWARYNV 97 (136)
T ss_dssp TTSCEEEEEEC--TTCHHHHHHHHHHHHHHHHCT---TSEEEEEECSSCHHHHHHHHHHHTCCSEEEECTTSHHHHHTTC
T ss_pred CCCEEEEEEEC--CcChhHHHHHHHHHHHHHHCC---CcEEEEEEcCCCHHHHHHHHHHcCCCceEEECCchhHHHhcCC
Confidence 57899999999 999999 88999988884 7999999986200 0125789999999
Q ss_pred c-CceEEEec
Q psy3889 96 T-PQLLWAFC 104 (243)
Q Consensus 96 ~-~PTi~lF~ 104 (243)
. +||++++.
T Consensus 98 ~~~P~~~lid 107 (136)
T 1lu4_A 98 PWQPAFVFYR 107 (136)
T ss_dssp CSSSEEEEEC
T ss_pred CCCCEEEEEC
Confidence 9 99999984
No 129
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=98.91 E-value=2e-09 Score=86.84 Aligned_cols=66 Identities=14% Similarity=0.129 Sum_probs=53.9
Q ss_pred cCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCC-------------------cccHHHHhhc
Q psy3889 37 KFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGE-------------------RDNEDLAKRG 93 (243)
Q Consensus 37 ~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~-------------------~~n~~l~~~~ 93 (243)
++++|||.||+ +||++| |.+.++++.++...++.|..|++++..+ ..+..++++|
T Consensus 47 ~gk~vll~F~a--~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 124 (165)
T 3s9f_A 47 SGKTVFFYFSA--SWCPPCRGFTPQLVEFYEKHHDSKNFEIILASWDEEEDDFNAYYAKMPWLSIPFANRNIVEALTKKY 124 (165)
T ss_dssp TTSEEEEEEEC--TTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHT
T ss_pred CCCEEEEEEEC--CcChhHHHHHHHHHHHHHHhccCCCeEEEEEecCCCHHHHHHHHHhCCCcccccCchhHHHHHHHHc
Confidence 57899999999 999999 9999999999754589999999862100 0017899999
Q ss_pred Ccc-CceEEEec
Q psy3889 94 CLT-PQLLWAFC 104 (243)
Q Consensus 94 ~V~-~PTi~lF~ 104 (243)
+|. +||++++.
T Consensus 125 ~v~~~Pt~~lid 136 (165)
T 3s9f_A 125 SVESIPTLIGLN 136 (165)
T ss_dssp TCCSSSEEEEEE
T ss_pred CCCCCCEEEEEe
Confidence 999 99999986
No 130
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=98.91 E-value=2e-09 Score=83.62 Aligned_cols=66 Identities=14% Similarity=0.095 Sum_probs=53.9
Q ss_pred cCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCC-------------------cccHHHHhhc
Q psy3889 37 KFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGE-------------------RDNEDLAKRG 93 (243)
Q Consensus 37 ~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~-------------------~~n~~l~~~~ 93 (243)
.+++++|.||+ +||++| |.+.++++.+....++.+..|++++..+ ..+.+++++|
T Consensus 27 ~gk~vll~F~a--~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (144)
T 1o73_A 27 VGKTVFLYFSA--SWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDENESDFHDYYGKMPWLALPFDQRSTVSELGKTF 104 (144)
T ss_dssp TTCEEEEEEEC--TTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEEEEC--cCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCceEeeccchhHHHHHHHHc
Confidence 57899999999 999999 8999999988644589999999862100 1246899999
Q ss_pred Ccc-CceEEEec
Q psy3889 94 CLT-PQLLWAFC 104 (243)
Q Consensus 94 ~V~-~PTi~lF~ 104 (243)
+|. +||++++.
T Consensus 105 ~v~~~Pt~~lid 116 (144)
T 1o73_A 105 GVESIPTLITIN 116 (144)
T ss_dssp TCCSSSEEEEEE
T ss_pred CCCCCCEEEEEE
Confidence 999 99999986
No 131
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=98.90 E-value=3e-09 Score=82.31 Aligned_cols=60 Identities=7% Similarity=0.038 Sum_probs=51.6
Q ss_pred cCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHH------------------------
Q psy3889 37 KFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNED------------------------ 88 (243)
Q Consensus 37 ~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~------------------------ 88 (243)
.+++++|.||+ +||++| |.+.++.+.+.. .++.|..|+++ .+.+
T Consensus 30 ~gk~vll~f~~--~~C~~C~~~~~~l~~l~~~~~~-~~~~~v~v~~d-----~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 101 (148)
T 3hcz_A 30 QAKYTILFFWD--SQCGHCQQETPKLYDWWLKNRA-KGIQVYAANIE-----RKDEEWLKFIRSKKIGGWLNVRDSKNHT 101 (148)
T ss_dssp CCSEEEEEEEC--GGGCTTCSHHHHHHHHHHHHGG-GTEEEEEEECC-----SSSHHHHHHHHHHTCTTSEEEECTTCCC
T ss_pred CCCEEEEEEEC--CCCccHHHHHHHHHHHHHHhcc-CCEEEEEEEec-----CCHHHHHHHHHHcCCCCceEEeccccch
Confidence 67899999999 999999 999999999864 36999999996 3333
Q ss_pred -HHhhcCcc-CceEEEec
Q psy3889 89 -LAKRGCLT-PQLLWAFC 104 (243)
Q Consensus 89 -l~~~~~V~-~PTi~lF~ 104 (243)
++++|+|. +||++++.
T Consensus 102 ~~~~~~~i~~~P~~~lid 119 (148)
T 3hcz_A 102 DFKITYDIYATPVLYVLD 119 (148)
T ss_dssp CHHHHHCCCSSCEEEEEC
T ss_pred hHHHhcCcCCCCEEEEEC
Confidence 89999999 99999884
No 132
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=98.89 E-value=7.6e-10 Score=85.90 Aligned_cols=71 Identities=13% Similarity=0.006 Sum_probs=49.3
Q ss_pred ccCCeEEEEEEecCCCCCCcHHHHHH-HHHccCC---CCcEEEEEecccCCCcccHHHHhhcCcc-CceEEEeccchHhh
Q psy3889 36 SKFHTTLVKFDIAYPYGAKHEAFLEV-AESSKHQ---PDFLVAEVGVKDYGERDNEDLAKRGCLT-PQLLWAFCVADSLN 110 (243)
Q Consensus 36 ~~~k~vlV~FyA~~pWC~~cp~~~~l-A~~~~~~---~~v~vakVd~~d~~~~~n~~l~~~~~V~-~PTi~lF~~~~~l~ 110 (243)
++...+||+||| |||++|..|+.. +..+... ..+.+.+||+++ ....+++.+|+|. .|||++|.+++.+-
T Consensus 16 ~~~~~~LV~F~A--~wC~~Ck~~~~~i~~~~~~~a~~~~~~l~~vdv~~---~~~~~la~~~~V~g~PT~i~f~~G~ev~ 90 (116)
T 3dml_A 16 DKAELRLLMFEQ--PGCLYCARWDAEIAPQYPLTDEGRAAPVQRLQMRD---PLPPGLELARPVTFTPTFVLMAGDVESG 90 (116)
T ss_dssp ---CEEEEEEEC--TTCHHHHHHHHHTTTTGGGSHHHHHSCEEEEETTS---CCCTTCBCSSCCCSSSEEEEEETTEEEE
T ss_pred ccCCCEEEEEEC--CCCHHHHHHHHHHHhhHHHhhhcccceEEEEECCC---CCchhHHHHCCCCCCCEEEEEECCEEEe
Confidence 355789999999 999999766532 2223210 126789999972 1246899999999 99999999655554
Q ss_pred h
Q psy3889 111 K 111 (243)
Q Consensus 111 ~ 111 (243)
+
T Consensus 91 R 91 (116)
T 3dml_A 91 R 91 (116)
T ss_dssp E
T ss_pred e
Confidence 4
No 133
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=98.88 E-value=4.9e-10 Score=88.79 Aligned_cols=80 Identities=14% Similarity=0.045 Sum_probs=59.9
Q ss_pred CceEcChhhHHHHhccCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccC----------------
Q psy3889 22 GHVSLDTHNFDKILSKFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDY---------------- 81 (243)
Q Consensus 22 ~v~~L~~~nF~~~v~~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~---------------- 81 (243)
.+..++..++.....++++++|.||+ +||++| |.+.++++.++. .++.|.-|++++.
T Consensus 22 ~l~~~~g~~~~~~~~~gk~vlv~F~a--~~C~~C~~~~~~l~~l~~~~~~-~~~~vv~v~~~~~~~~~~~~~~~~~~~~~ 98 (164)
T 2h30_A 22 TMKTADNRPASVYLKKDKPTLIKFWA--SWCPLCLSELGQAEKWAQDAKF-SSANLITVASPGFLHEKKDGEFQKWYAGL 98 (164)
T ss_dssp TCEETTSSBGGGGCCTTSCEEEEECC--TTCHHHHHHHHHHHHHHTCGGG-TTSEEEEEECTTSTTCCCTTHHHHHHTTS
T ss_pred ccCCCCCCEeeHHHhCCCEEEEEEEC--CCCHHHHHHHHHHHHHHHHccc-CCcEEEEEEcCCCccccCHHHHHHHHHhC
Confidence 56777777776555677899999999 999999 889999888743 3577766664310
Q ss_pred -------CCcccHHHHhhcCcc-CceEEEec
Q psy3889 82 -------GERDNEDLAKRGCLT-PQLLWAFC 104 (243)
Q Consensus 82 -------~~~~n~~l~~~~~V~-~PTi~lF~ 104 (243)
....+.+++++|+|. +||++++.
T Consensus 99 ~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid 129 (164)
T 2h30_A 99 NYPKLPVVTDNGGTIAQNLNISVYPSWALIG 129 (164)
T ss_dssp CCTTSCEEECTTCHHHHHTTCCSSSEEEEEC
T ss_pred CCCcceEEEcCchHHHHHcCCCccceEEEEC
Confidence 001357899999999 99999884
No 134
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=98.87 E-value=2.4e-09 Score=84.67 Aligned_cols=72 Identities=14% Similarity=0.138 Sum_probs=52.9
Q ss_pred EcChhhHHHHhccCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhc-------
Q psy3889 25 SLDTHNFDKILSKFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRG------- 93 (243)
Q Consensus 25 ~L~~~nF~~~v~~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~------- 93 (243)
.++..++.-.--.++++||.||+ +||++| |.+.++++.+.. .++.++.|+++ ...+.+.+|
T Consensus 21 ~~~g~~~~l~~~~gk~vlv~f~~--~~C~~C~~~~~~l~~l~~~~~~-~~v~~v~v~~d-----~~~~~~~~~~~~~~~~ 92 (165)
T 3or5_A 21 TVDGKPFSSASLKGKAYIVNFFA--TWCPPCRSEIPDMVQVQKTWAS-RGFTFVGIAVN-----EQLPNVKNYMKTQGII 92 (165)
T ss_dssp CTTSCEEEGGGGTTCEEEEEEEC--TTSHHHHHHHHHHHHHHHHHTT-TTEEEEEEECS-----CCHHHHHHHHHHHTCC
T ss_pred CCCCCEechhHcCCCEEEEEEEc--CcCHHHHHHHHHHHHHHHHhcc-CCeEEEEEECC-----CCHHHHHHHHHHcCCC
Confidence 34444333322367899999999 999999 899999999863 46999999997 344444444
Q ss_pred --------------------Ccc-CceEEEec
Q psy3889 94 --------------------CLT-PQLLWAFC 104 (243)
Q Consensus 94 --------------------~V~-~PTi~lF~ 104 (243)
+|. +||++++.
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid 124 (165)
T 3or5_A 93 YPVMMATPELIRAFNGYIDGGITGIPTSFVID 124 (165)
T ss_dssp SCEEECCHHHHHHHHTTSTTCSCSSSEEEEEC
T ss_pred CceEecCHHHHHHHhhhhccCCCCCCeEEEEC
Confidence 788 99988774
No 135
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=98.86 E-value=2e-09 Score=82.37 Aligned_cols=57 Identities=16% Similarity=0.103 Sum_probs=49.2
Q ss_pred eEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhcCccCceEEEeccch
Q psy3889 40 TTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRGCLTPQLLWAFCVAD 107 (243)
Q Consensus 40 ~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~~V~~PTi~lF~~~~ 107 (243)
.+++.|++ |||++| |.+++++.++ .+.+.+||++ ++++++.+|++++||+++|.+.+
T Consensus 30 ~~vv~y~~--~~C~~C~~a~~~L~~l~~e~----~i~~~~vDId-----~d~~l~~~ygv~VP~l~~~~dG~ 90 (107)
T 2fgx_A 30 RKLVVYGR--EGCHLCEEMIASLRVLQKKS----WFELEVINID-----GNEHLTRLYNDRVPVLFAVNEDK 90 (107)
T ss_dssp CCEEEEEC--SSCHHHHHHHHHHHHHHHHS----CCCCEEEETT-----TCHHHHHHSTTSCSEEEETTTTE
T ss_pred cEEEEEeC--CCChhHHHHHHHHHHHHHhc----CCeEEEEECC-----CCHHHHHHhCCCCceEEEEECCE
Confidence 67999999 999999 8888888776 3789999997 78999999998899999887443
No 136
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=98.86 E-value=4e-09 Score=90.89 Aligned_cols=68 Identities=7% Similarity=-0.075 Sum_probs=55.9
Q ss_pred hhHHHHh-ccCCeEEEEEEecCCC--CCCc----HHHHHHHHHc---cCCCCcEEEEEecccCCCcccHHHHhhcCcc-C
Q psy3889 29 HNFDKIL-SKFHTTLVKFDIAYPY--GAKH----EAFLEVAESS---KHQPDFLVAEVGVKDYGERDNEDLAKRGCLT-P 97 (243)
Q Consensus 29 ~nF~~~v-~~~k~vlV~FyA~~pW--C~~c----p~~~~lA~~~---~~~~~v~vakVd~~d~~~~~n~~l~~~~~V~-~ 97 (243)
..|.+++ .-.++|+|.||+ +| |++| |.++++|+.+ ++.+.+.|+++|++ +++++|++|+|+ +
T Consensus 15 ~ql~~~~~~~~~pv~v~~~~--~~~~c~~c~~~~~~l~ela~~~~~~~~~~~v~~~~vd~d-----~~~~~~~~~gv~~~ 87 (243)
T 2hls_A 15 RELRETLAEMVNPVEVHVFL--SKSGCETCEDTLRLMKLFEEESPTRNGGKLLKLNVYYRE-----SDSDKFSEFKVERV 87 (243)
T ss_dssp HHHHHHHTTCCSCEEEEEEE--CSSSCTTHHHHHHHHHHHHHHSCEETTEESEEEEEEETT-----TTHHHHHHTTCCSS
T ss_pred HHHHHHHHhCCCCEEEEEEe--CCCCCCchHHHHHHHHHHHHhccCCCCCceeEEEEecCC-----cCHHHHHhcCCCcC
Confidence 5566666 445799999999 99 9999 8888888874 22112999999997 789999999999 9
Q ss_pred ceEEEe
Q psy3889 98 QLLWAF 103 (243)
Q Consensus 98 PTi~lF 103 (243)
||+++|
T Consensus 88 Pt~~i~ 93 (243)
T 2hls_A 88 PTVAFL 93 (243)
T ss_dssp SEEEET
T ss_pred CEEEEE
Confidence 999997
No 137
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=98.86 E-value=7.5e-09 Score=80.84 Aligned_cols=65 Identities=8% Similarity=0.008 Sum_probs=51.9
Q ss_pred cCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCC------------------cccHHHHhhcC
Q psy3889 37 KFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGE------------------RDNEDLAKRGC 94 (243)
Q Consensus 37 ~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~------------------~~n~~l~~~~~ 94 (243)
.+++++|.||+ +||++| |.+.++.+.+. ..++.++.|++++..+ ..+..++++|+
T Consensus 29 ~gk~~lv~f~~--~~C~~C~~~~~~l~~l~~~~~-~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 105 (152)
T 2lja_A 29 KGKYIYIDVWA--TWCGPCRGELPALKELEEKYA-GKDIHFVSLSCDKNKKAWENMVTKDQLKGIQLHMGTDRTFMDAYL 105 (152)
T ss_dssp TTSEEEEEECC--SSCCGGGGTHHHHHHHHHHST-TSSEEEEEEECCSCHHHHHHHHHHHTCCSEEEECSSCTHHHHHTT
T ss_pred CCCEEEEEEEC--CcCHhHHHHhHHHHHHHHHhc-cCCeEEEEEEccCcHHHHHHHHHhcCCCCceeecCcchhHHHHcC
Confidence 57899999999 999999 89999998885 3469999999862100 00237999999
Q ss_pred cc-CceEEEec
Q psy3889 95 LT-PQLLWAFC 104 (243)
Q Consensus 95 V~-~PTi~lF~ 104 (243)
|. +||++++.
T Consensus 106 v~~~P~~~lid 116 (152)
T 2lja_A 106 INGIPRFILLD 116 (152)
T ss_dssp CCSSCCEEEEC
T ss_pred cCCCCEEEEEC
Confidence 99 99999886
No 138
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=98.85 E-value=5.4e-09 Score=82.15 Aligned_cols=65 Identities=9% Similarity=0.066 Sum_probs=51.5
Q ss_pred cCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEeccc-------------------CCCcccHHHHhhc
Q psy3889 37 KFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKD-------------------YGERDNEDLAKRG 93 (243)
Q Consensus 37 ~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d-------------------~~~~~n~~l~~~~ 93 (243)
++++|||.||+ +||++| |.+.++++.+. ..++.|..|++++ ........++++|
T Consensus 23 ~gk~vlv~F~a--~wC~~C~~~~~~l~~l~~~~~-~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (151)
T 3raz_A 23 KAPVRIVNLWA--TWCGPCRKEMPAMSKWYKAQK-KGSVDMVGIALDTSDNIGNFLKQTPVSYPIWRYTGANSRNFMKTY 99 (151)
T ss_dssp CSSEEEEEEEC--TTCHHHHHHHHHHHHHHHTSC-TTTEEEEEEESSCHHHHHHHHHHSCCSSCEEEECCSCHHHHHHTT
T ss_pred CCCEEEEEEEc--CcCHHHHHHHHHHHHHHHHhc-cCCeEEEEEECCChHHHHHHHHHcCCCCceEecCccchHHHHHHh
Confidence 67899999999 999999 89999998884 4579999999851 0112356678888
Q ss_pred C--cc-CceEEEec
Q psy3889 94 C--LT-PQLLWAFC 104 (243)
Q Consensus 94 ~--V~-~PTi~lF~ 104 (243)
+ +. +||++++.
T Consensus 100 ~~~v~~~P~~~lid 113 (151)
T 3raz_A 100 GNTVGVLPFTVVEA 113 (151)
T ss_dssp TCCSCCSSEEEEEE
T ss_pred CCccCCCCEEEEEC
Confidence 8 88 99888774
No 139
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=98.84 E-value=4.9e-09 Score=82.13 Aligned_cols=65 Identities=8% Similarity=-0.020 Sum_probs=52.0
Q ss_pred cCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCC-----------------cccHHHHhhcCc
Q psy3889 37 KFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGE-----------------RDNEDLAKRGCL 95 (243)
Q Consensus 37 ~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~-----------------~~n~~l~~~~~V 95 (243)
.+++++|.||+ +||++| |.+.++.+.+.. .++.|..|++++..+ ..+..++++|+|
T Consensus 25 ~gk~vlv~F~~--~~C~~C~~~~~~l~~~~~~~~~-~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 101 (151)
T 2f9s_A 25 KGKGVFLNFWG--TWCEPCKKEFPYMANQYKHFKS-QGVEIVAVNVGESKIAVHNFMKSYGVNFPVVLDTDRQVLDAYDV 101 (151)
T ss_dssp TTSEEEEEEEC--TTCHHHHHHHHHHHHHHHHHGG-GTEEEEEEEESCCHHHHHHHHHHHTCCSCEEEETTSHHHHHTTC
T ss_pred CCCEEEEEEEC--CCCHHHHHHHHHHHHHHHHhcc-CCeEEEEEECCCCHHHHHHHHHHcCCCceEEECCchHHHHhcCC
Confidence 57899999999 999999 899999988853 469999999862000 014579999999
Q ss_pred c-CceEEEec
Q psy3889 96 T-PQLLWAFC 104 (243)
Q Consensus 96 ~-~PTi~lF~ 104 (243)
. +||++++.
T Consensus 102 ~~~P~~~lid 111 (151)
T 2f9s_A 102 SPLPTTFLIN 111 (151)
T ss_dssp CSSCEEEEEC
T ss_pred CCCCeEEEEC
Confidence 9 99999884
No 140
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=98.84 E-value=6.6e-09 Score=82.36 Aligned_cols=65 Identities=14% Similarity=0.061 Sum_probs=52.7
Q ss_pred cCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCC--------------CcccHHHHhhcCcc-C
Q psy3889 37 KFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYG--------------ERDNEDLAKRGCLT-P 97 (243)
Q Consensus 37 ~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~--------------~~~n~~l~~~~~V~-~ 97 (243)
++++++|.||+ +||++| |.+.++++.+.. .++.++.|++++.- ...+..++++|+|. +
T Consensus 40 ~gk~vll~F~~--~~C~~C~~~~~~l~~~~~~~~~-~~~~~v~v~~d~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 116 (158)
T 3hdc_A 40 RGKIVLVNFWA--SWCPYCRDEMPSMDRLVKSFPK-GDLVVLAVNVEKRFPEKYRRAPVSFNFLSDATGQVQQRYGANRL 116 (158)
T ss_dssp TTSEEEEEEEC--TTCHHHHHHHHHHHHHHHHSST-TSEEEEEEECSSSCCGGGGGCCCSCEEEECTTSHHHHHTTCCSS
T ss_pred CCCEEEEEEEC--CcCHHHHHHHHHHHHHHHHccc-CCeEEEEEeCCHHHHHHHHHcCCCceEEECchHHHHHHhCCCCc
Confidence 57899999999 999999 899999999863 57999999986200 01257899999999 9
Q ss_pred ceEEEec
Q psy3889 98 QLLWAFC 104 (243)
Q Consensus 98 PTi~lF~ 104 (243)
||++++.
T Consensus 117 P~~~lid 123 (158)
T 3hdc_A 117 PDTFIVD 123 (158)
T ss_dssp SEEEEEC
T ss_pred ceEEEEc
Confidence 9988774
No 141
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=98.83 E-value=1.9e-08 Score=78.93 Aligned_cols=64 Identities=13% Similarity=0.165 Sum_probs=52.2
Q ss_pred cCCeEEEEEEecCCCCCC--c----HHHHHHHHHccCCCCcEEEEEecccCCCcc----------------------cHH
Q psy3889 37 KFHTTLVKFDIAYPYGAK--H----EAFLEVAESSKHQPDFLVAEVGVKDYGERD----------------------NED 88 (243)
Q Consensus 37 ~~k~vlV~FyA~~pWC~~--c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~----------------------n~~ 88 (243)
.+++++|.||+ +||++ | |.+.++.+.++...++.|..|++++ ..+ +..
T Consensus 32 ~gk~vll~F~a--~~C~~v~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~--~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 107 (150)
T 3fw2_A 32 KQKSLLINFWA--SWNDSISQKQSNSELREIYKKYKKNKYIGMLGISLDV--DKQQWKDAIKRDTLDWEQVCDFGGLNSE 107 (150)
T ss_dssp TTSEEEEEEEC--TTCCCHHHHHHHHHHHHHHHHHTTCSSEEEEEEECCS--CHHHHHHHHHHTTCCSEEECCSCGGGCH
T ss_pred CCCEEEEEEEe--CCCCchHHHHHHHHHHHHHHHhccCCCeEEEEEEcCC--CHHHHHHHHHHhCCCceEEEcCcccchH
Confidence 56899999999 99999 9 8999999998334579999999862 110 347
Q ss_pred HHhhcCcc-CceEEEec
Q psy3889 89 LAKRGCLT-PQLLWAFC 104 (243)
Q Consensus 89 l~~~~~V~-~PTi~lF~ 104 (243)
+++.|+|. +||++++.
T Consensus 108 ~~~~~~v~~~P~~~lid 124 (150)
T 3fw2_A 108 VAKQYSIYKIPANILLS 124 (150)
T ss_dssp HHHHTTCCSSSEEEEEC
T ss_pred HHHHcCCCccCeEEEEC
Confidence 88999999 99998884
No 142
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=98.82 E-value=5.4e-09 Score=81.30 Aligned_cols=64 Identities=11% Similarity=-0.028 Sum_probs=49.8
Q ss_pred cCCeEEEEEEecCCCCCCc----HHHHH---HHHHccCCCCcEEEEEecccCCCcc--------------------cHHH
Q psy3889 37 KFHTTLVKFDIAYPYGAKH----EAFLE---VAESSKHQPDFLVAEVGVKDYGERD--------------------NEDL 89 (243)
Q Consensus 37 ~~k~vlV~FyA~~pWC~~c----p~~~~---lA~~~~~~~~v~vakVd~~d~~~~~--------------------n~~l 89 (243)
.+++|+|.||+ +||++| |.+.+ +.+.++. .++.|..|+.++ +... ...+
T Consensus 30 ~gk~vll~F~a--~wC~~C~~~~~~l~~~~~l~~~~~~-~~~~vi~i~~d~-~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 105 (142)
T 3eur_A 30 PAEYTLLFINN--PGCHACAEMIEGLKASPVINGFTAA-KKLKVLSIYPDE-ELDEWKKHRNDFAKEWTNGYDKELVIKN 105 (142)
T ss_dssp CCSEEEEEECC--SSSHHHHHHHHHHHHCHHHHHHHHT-TSEEEEEEECSS-CHHHHHHHGGGSCTTSEEEECTTCHHHH
T ss_pred CCCEEEEEEEC--CCCccHHHHHHHHhhhHHHHHHhcc-CCeEEEEEEcCC-CHHHHHHHHHhcccccccccCccchhhh
Confidence 46899999999 999999 88999 8888864 579999999862 1000 0125
Q ss_pred HhhcCcc-CceEEEec
Q psy3889 90 AKRGCLT-PQLLWAFC 104 (243)
Q Consensus 90 ~~~~~V~-~PTi~lF~ 104 (243)
++.|+|. +||++++.
T Consensus 106 ~~~~~v~~~P~~~lid 121 (142)
T 3eur_A 106 KNLYDLRAIPTLYLLD 121 (142)
T ss_dssp TTCSCCTTCSEEEEEC
T ss_pred hhhcCCCcCCeEEEEC
Confidence 7889999 99998885
No 143
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=98.81 E-value=1.3e-09 Score=88.15 Aligned_cols=76 Identities=5% Similarity=-0.106 Sum_probs=50.2
Q ss_pred hhHHHHhccCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhcCcc-CceEEEe
Q psy3889 29 HNFDKILSKFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRGCLT-PQLLWAF 103 (243)
Q Consensus 29 ~nF~~~v~~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~~V~-~PTi~lF 103 (243)
+.++....++++|||.||| +||++| |.+.+..+.... .+..|+.|++|+ ++.+++.+|+|. +||+++|
T Consensus 35 ~al~~A~~~~KpVlV~F~A--~WC~~Ck~m~p~~~~~~~~~~~-~~~~fv~V~vD~----e~~~~~~~~~v~~~PT~~f~ 107 (151)
T 3ph9_A 35 EGLFYAQKSKKPLMVIHHL--EDCQYSQALKKVFAQNEEIQEM-AQNKFIMLNLMH----ETTDKNLSPDGQYVPRIMFV 107 (151)
T ss_dssp HHHHHHHHHTCCEEEEECC--TTCHHHHHHHHHHHHCHHHHHH-HHHTCEEEEESS----CCSCGGGCTTCCCSSEEEEE
T ss_pred HHHHHHHHcCCcEEEEEEC--CCCHhHHHHHHHHhcCHHHHHH-hhcCeEEEEecC----CchhhHhhcCCCCCCEEEEE
Confidence 3444445678999999999 999999 666653221110 012245555541 345568899999 9999999
Q ss_pred c-cchHhhh
Q psy3889 104 C-VADSLNK 111 (243)
Q Consensus 104 ~-~~~~l~~ 111 (243)
. ++..+.+
T Consensus 108 ~~~G~~v~~ 116 (151)
T 3ph9_A 108 DPSLTVRAD 116 (151)
T ss_dssp CTTSCBCTT
T ss_pred CCCCCEEEE
Confidence 7 6655544
No 144
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=98.80 E-value=1.7e-09 Score=96.40 Aligned_cols=63 Identities=10% Similarity=0.024 Sum_probs=46.0
Q ss_pred hhhHHHHhccCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCC-cccHHHHhhcCcc-CceEE
Q psy3889 28 THNFDKILSKFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGE-RDNEDLAKRGCLT-PQLLW 101 (243)
Q Consensus 28 ~~nF~~~v~~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~-~~n~~l~~~~~V~-~PTi~ 101 (243)
...|.+.+.+.. +|+||| |||+|| |.|+++|+++ ..|||+..|. .+++++|++|+|+ +||++
T Consensus 189 ~~~la~~l~~~~--vV~F~A--~WC~~Ck~l~p~le~lA~~l--------~~Vd~d~~d~~~~~~~la~~~gI~~vPT~~ 256 (291)
T 3kp9_A 189 AVGLAAHLRQIG--GTMYGA--YWCPHCQDQKELFGAAFDQV--------PYVECSPNGPGTPQAQECTEAGITSYPTWI 256 (291)
T ss_dssp HHHHHHHHHHTT--CEEEEC--TTCHHHHHHHHHHGGGGGGS--------CEEESCSSCSSSCCCHHHHTTTCCSTTEEE
T ss_pred HHHHHHHhCCCC--EEEEEC--CCCHHHHHHHHHHHHHHHHc--------CEEEEeecCchhhHHHHHHHcCCcccCeEE
Confidence 456666664433 689999 999999 8898888654 1566652233 3589999999999 99965
Q ss_pred E
Q psy3889 102 A 102 (243)
Q Consensus 102 l 102 (243)
+
T Consensus 257 i 257 (291)
T 3kp9_A 257 I 257 (291)
T ss_dssp E
T ss_pred E
Confidence 4
No 145
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=98.79 E-value=1.8e-08 Score=78.78 Aligned_cols=65 Identities=14% Similarity=0.043 Sum_probs=50.6
Q ss_pred cCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCC------------------CcccHHHHhhcC
Q psy3889 37 KFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYG------------------ERDNEDLAKRGC 94 (243)
Q Consensus 37 ~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~------------------~~~n~~l~~~~~ 94 (243)
.+++++|.||+ +||++| |.+.++++.+.. .++.+..|+.+... -..+..+++.|+
T Consensus 27 ~gk~~lv~f~~--~~C~~C~~~~~~l~~l~~~~~~-~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 103 (153)
T 2l5o_A 27 QGKVTLINFWF--PSCPGCVSEMPKIIKTANDYKN-KNFQVLAVAQPIDPIESVRQYVKDYGLPFTVMYDADKAVGQAFG 103 (153)
T ss_dssp TTCEEEEEEEC--TTCTTHHHHHHHHHHHHHHGGG-TTEEEEEEECTTSCHHHHHHHHHHTTCCSEEEECSSCHHHHHHT
T ss_pred CCCEEEEEEEC--CCCccHHHHHHHHHHHHHHhcc-CCeEEEEEecCCCCHHHHHHHHHHcCCCceEEcCchHHHHHHcC
Confidence 67899999999 999999 899999998863 36888777642000 013567999999
Q ss_pred cc-CceEEEec
Q psy3889 95 LT-PQLLWAFC 104 (243)
Q Consensus 95 V~-~PTi~lF~ 104 (243)
|. +||++++.
T Consensus 104 i~~~P~~~lid 114 (153)
T 2l5o_A 104 TQVYPTSVLIG 114 (153)
T ss_dssp CCSSSEEEEEC
T ss_pred CCccCeEEEEC
Confidence 99 99999884
No 146
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=98.78 E-value=5.7e-09 Score=80.77 Aligned_cols=64 Identities=13% Similarity=0.118 Sum_probs=47.0
Q ss_pred cCCeEEEEEEecCCCCCCc----HHHHH---HHHHccCCCCcEEEEEecccCCCcccHH------------------H--
Q psy3889 37 KFHTTLVKFDIAYPYGAKH----EAFLE---VAESSKHQPDFLVAEVGVKDYGERDNED------------------L-- 89 (243)
Q Consensus 37 ~~k~vlV~FyA~~pWC~~c----p~~~~---lA~~~~~~~~v~vakVd~~d~~~~~n~~------------------l-- 89 (243)
.+++++|.||+ +||++| |.+.+ +.+.++. .++.+..|++++ +...... +
T Consensus 26 ~gk~vll~F~a--~~C~~C~~~~~~l~~~~~l~~~~~~-~~~~~v~v~~d~-~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 101 (142)
T 3ewl_A 26 KAQYTMLFFYD--PDCSNCRKFEKLFAEIPAFVEMVEN-GTLRVLAIYPDE-NREEWATKAVYMPQGWIVGWNKAGDIRT 101 (142)
T ss_dssp CCSEEEEEECC--SSCHHHHHHHHHHHTCHHHHHHHHH-TSEEEEEEECSS-CHHHHHHHHTTSCTTCEEEECTTCHHHH
T ss_pred CCCEEEEEEEC--CCCccHHHHHHHHHHhHHHHHHhcc-CCeEEEEEEecC-CHHHHHHHHHHcCCCcceeeCCccchhh
Confidence 57899999999 999999 66777 8887753 469999999862 1111111 1
Q ss_pred HhhcCcc-CceEEEec
Q psy3889 90 AKRGCLT-PQLLWAFC 104 (243)
Q Consensus 90 ~~~~~V~-~PTi~lF~ 104 (243)
++.|+|. +||++++.
T Consensus 102 ~~~~~v~~~P~~~lid 117 (142)
T 3ewl_A 102 RQLYDIRATPTIYLLD 117 (142)
T ss_dssp TTCSCCCSSSEEEEEC
T ss_pred HHHcCCCCCCeEEEEC
Confidence 3488999 99988884
No 147
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=98.78 E-value=1.6e-08 Score=78.99 Aligned_cols=63 Identities=8% Similarity=0.019 Sum_probs=50.7
Q ss_pred cCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcc-------------------cHHHHhhc
Q psy3889 37 KFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERD-------------------NEDLAKRG 93 (243)
Q Consensus 37 ~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~-------------------n~~l~~~~ 93 (243)
.+++++|.||+ +||++| |.+.++++.+.. .++.+..|+++. +.+ +..+++.|
T Consensus 27 ~gk~vll~f~~--~~C~~C~~~~~~l~~l~~~~~~-~~~~~v~v~~d~--~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 101 (152)
T 3gl3_A 27 TGSVVYLDFWA--SWCGPCRQSFPWMNQMQAKYKA-KGFQVVAVNLDA--KTGDAMKFLAQVPAEFTVAFDPKGQTPRLY 101 (152)
T ss_dssp TTSEEEEEEEC--TTCTHHHHHHHHHHHHHHHHGG-GTEEEEEEECCS--SHHHHHHHHHHSCCCSEEEECTTCHHHHHT
T ss_pred CCCEEEEEEEC--CcCHHHHHHHHHHHHHHHHhhc-CCeEEEEEECCC--CHHHHHHHHHHcCCCCceeECCcchhHHHc
Confidence 57899999999 999999 899999998864 358899998862 110 12688999
Q ss_pred Ccc-CceEEEec
Q psy3889 94 CLT-PQLLWAFC 104 (243)
Q Consensus 94 ~V~-~PTi~lF~ 104 (243)
+|. +||++++.
T Consensus 102 ~v~~~P~~~lid 113 (152)
T 3gl3_A 102 GVKGMPTSFLID 113 (152)
T ss_dssp TCCSSSEEEEEC
T ss_pred CCCCCCeEEEEC
Confidence 999 99998884
No 148
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=98.75 E-value=1.4e-08 Score=79.59 Aligned_cols=60 Identities=10% Similarity=0.070 Sum_probs=49.1
Q ss_pred CeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCC----------------------cccHHHHhh
Q psy3889 39 HTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGE----------------------RDNEDLAKR 92 (243)
Q Consensus 39 k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~----------------------~~n~~l~~~ 92 (243)
++++|.||+ +||++| |.+.++++.+ ++.+..|+++..+. ..+..++++
T Consensus 31 k~vll~f~~--~~C~~C~~~~~~l~~l~~~~----~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 104 (154)
T 3ia1_A 31 KPAVIVFWA--SWCTVCKAEFPGLHRVAEET----GVPFYVISREPRDTREVVLEYMKTYPRFIPLLASDRDRPHEVAAR 104 (154)
T ss_dssp SSEEEEEEC--TTCHHHHHHHHHHHHHHHHH----CCCEEEEECCTTCCHHHHHHHHTTCTTEEECBCCSSCCHHHHHTT
T ss_pred CeEEEEEEc--ccChhHHHHHHHHHHHHHHc----CCeEEEEeCCCcccHHHHHHHHHHcCCCcccccccccchHHHHHH
Confidence 899999999 999999 8999999888 67788888821111 156889999
Q ss_pred cCcc-CceEEEec
Q psy3889 93 GCLT-PQLLWAFC 104 (243)
Q Consensus 93 ~~V~-~PTi~lF~ 104 (243)
|+|. +||++++.
T Consensus 105 ~~v~~~P~~~lid 117 (154)
T 3ia1_A 105 FKVLGQPWTFVVD 117 (154)
T ss_dssp SSBCSSCEEEEEC
T ss_pred hCCCcccEEEEEC
Confidence 9999 99988884
No 149
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=98.74 E-value=2e-08 Score=79.03 Aligned_cols=64 Identities=6% Similarity=-0.074 Sum_probs=48.1
Q ss_pred cCCeEEEEEEecCCCCCCc-----HHHHHHHHHccCCCCcEEEEEecccCCC------------------------cccH
Q psy3889 37 KFHTTLVKFDIAYPYGAKH-----EAFLEVAESSKHQPDFLVAEVGVKDYGE------------------------RDNE 87 (243)
Q Consensus 37 ~~k~vlV~FyA~~pWC~~c-----p~~~~lA~~~~~~~~v~vakVd~~d~~~------------------------~~n~ 87 (243)
.+++|+|.||+ +||++| |.+.++.+.++. .++.|..|+++ .+. ....
T Consensus 29 ~gk~vlv~F~a--~~C~~C~~e~~~~l~~l~~~~~~-~~v~~v~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 104 (160)
T 3lor_A 29 RGKVVVVEVFQ--MLCPGCVNHGVPQAQKIHRMIDE-SQVQVIGLHSV-FEHHDVMTPEALKVFIDEFGIKFPVAVDMPR 104 (160)
T ss_dssp TTSEEEEEEEC--TTCHHHHHTHHHHHHHHHHHSCT-TTEEEEEEECC-CSCGGGSCHHHHHHHHHHTTCCSCEEEECCC
T ss_pred CCCEEEEEEEc--CCCcchhhhhhHHHHHHHHHhCc-CCcEEEEEecc-ccccccCCHHHHHHHHHHcCCCCcEEECCcc
Confidence 57899999999 999999 567778877753 46999999863 000 0122
Q ss_pred H------HHhhcCcc-CceEEEec
Q psy3889 88 D------LAKRGCLT-PQLLWAFC 104 (243)
Q Consensus 88 ~------l~~~~~V~-~PTi~lF~ 104 (243)
. ++++|+|. +||++++.
T Consensus 105 ~~~~~~~~~~~~~v~~~P~~~lid 128 (160)
T 3lor_A 105 EGQRIPSTMKKYRLEGTPSIILAD 128 (160)
T ss_dssp TTCSSCHHHHHTTCCSSSEEEEEC
T ss_pred ccchhhhHHHhcccCccceEEEEC
Confidence 2 88899999 99988874
No 150
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.73 E-value=3.6e-08 Score=93.61 Aligned_cols=71 Identities=6% Similarity=-0.062 Sum_probs=60.0
Q ss_pred CceEcChhhHHHHh-ccCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhcCcc
Q psy3889 22 GHVSLDTHNFDKIL-SKFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRGCLT 96 (243)
Q Consensus 22 ~v~~L~~~nF~~~v-~~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~~V~ 96 (243)
.-..+++++++.+. ...+..++.||+ |||++| |.+++++..+ +++.+.+||++ ++++++++|+|.
T Consensus 100 ~~~~~~~~~~~~i~~~~~~~~i~~f~a--~~C~~C~~~~~~l~~~a~~~---~~v~~~~vd~~-----~~~~~~~~~~i~ 169 (521)
T 1hyu_A 100 HPSKEAQSLLEQIRDIDGDFEFETYYS--LSCHNCPDVVQALNLMAVLN---PRIKHTAIDGG-----TFQNEITERNVM 169 (521)
T ss_dssp CCCCSCHHHHHHHHHCCSCEEEEEEEC--TTCSSHHHHHHHHHHHHHHC---TTEEEEEEETT-----TCHHHHHHTTCC
T ss_pred CCCCCCHHHHHHHHhcCCCcceEEEEC--CCCcCcHHHHHHHHHHHhHc---CceEEEEEech-----hhHHHHHHhCCC
Confidence 34678999998886 345677899999 999999 7778887765 37999999997 899999999999
Q ss_pred -CceEEE
Q psy3889 97 -PQLLWA 102 (243)
Q Consensus 97 -~PTi~l 102 (243)
+||+++
T Consensus 170 svPt~~i 176 (521)
T 1hyu_A 170 GVPAVFV 176 (521)
T ss_dssp SSSEEEE
T ss_pred ccCEEEE
Confidence 999966
No 151
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=98.73 E-value=1.9e-08 Score=76.07 Aligned_cols=64 Identities=14% Similarity=0.006 Sum_probs=49.6
Q ss_pred cCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCC-----------------------cccHHH
Q psy3889 37 KFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGE-----------------------RDNEDL 89 (243)
Q Consensus 37 ~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~-----------------------~~n~~l 89 (243)
++++++|.||+ +||++| |.+.++++.+. .++.+..|++++.+. ..+..+
T Consensus 21 ~gk~~lv~f~~--~~C~~C~~~~~~l~~~~~~~~--~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 96 (138)
T 4evm_A 21 KGKKVYLKFWA--SWCSICLASLPDTDEIAKEAG--DDYVVLTVVSPGHKGEQSEADFKNWYKGLDYKNLPVLVDPSGKL 96 (138)
T ss_dssp TTSEEEEEECC--TTCHHHHHHHHHHHHHHHTCT--TTEEEEEEECTTSTTCCCHHHHHHHHTTCCCTTCCEEECTTCHH
T ss_pred CCCEEEEEEEc--CcCHHHHHHHHHHHHHHHHhC--CCcEEEEEEcCCCCchhhHHHHHHHHhhcCCCCeeEEECcchHH
Confidence 57899999999 999999 88888888753 478888885431110 134579
Q ss_pred HhhcCcc-CceEEEec
Q psy3889 90 AKRGCLT-PQLLWAFC 104 (243)
Q Consensus 90 ~~~~~V~-~PTi~lF~ 104 (243)
+++|+|. +||++++.
T Consensus 97 ~~~~~v~~~P~~~lid 112 (138)
T 4evm_A 97 LETYGVRSYPTQAFID 112 (138)
T ss_dssp HHHTTCCSSSEEEEEC
T ss_pred HHHcCcccCCeEEEEC
Confidence 9999999 99999984
No 152
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=98.72 E-value=1.6e-08 Score=80.65 Aligned_cols=61 Identities=8% Similarity=0.001 Sum_probs=45.3
Q ss_pred ccCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCC------------------CcccHHHHhhc
Q psy3889 36 SKFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYG------------------ERDNEDLAKRG 93 (243)
Q Consensus 36 ~~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~------------------~~~n~~l~~~~ 93 (243)
.++++++|.||+ +||++| |.+.++++. ++.+..|++++.. ...+..++++|
T Consensus 49 ~~gk~vll~F~a--~~C~~C~~~~~~l~~l~~~-----~v~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 121 (168)
T 2b1k_A 49 TQGKPVLLNVWA--TWCPTCRAEHQYLNQLSAQ-----GIRVVGMNYKDDRQKAISWLKELGNPYALSLFDGDGMLGLDL 121 (168)
T ss_dssp CCSSCEEEEEEC--TTCHHHHHHHHHHHHHHHT-----TCCEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTCHHHHHH
T ss_pred cCCCEEEEEEEC--CCCHHHHHHHHHHHHHHHC-----CCEEEEEECCCChHHHHHHHHHcCCCCceeeECcchHHHHHc
Confidence 478899999999 999999 777777654 5778888853200 01456789999
Q ss_pred Ccc-CceEEEe
Q psy3889 94 CLT-PQLLWAF 103 (243)
Q Consensus 94 ~V~-~PTi~lF 103 (243)
+|. +||.+++
T Consensus 122 ~v~~~P~~~li 132 (168)
T 2b1k_A 122 GVYGAPETFLI 132 (168)
T ss_dssp TCCSSSEEEEE
T ss_pred CccccCEEEEE
Confidence 999 9965555
No 153
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=98.71 E-value=3.4e-08 Score=77.67 Aligned_cols=65 Identities=5% Similarity=-0.137 Sum_probs=47.5
Q ss_pred cCCeEEEEEEecCCCCCCc-----HHHHHHHHHccCCCCcEEEEEeccc-------------------------CCCccc
Q psy3889 37 KFHTTLVKFDIAYPYGAKH-----EAFLEVAESSKHQPDFLVAEVGVKD-------------------------YGERDN 86 (243)
Q Consensus 37 ~~k~vlV~FyA~~pWC~~c-----p~~~~lA~~~~~~~~v~vakVd~~d-------------------------~~~~~n 86 (243)
.+++++|.||+ +||++| |.+.++.+.+. ..++.|..|+++. .|....
T Consensus 27 ~gk~vlv~f~a--~wC~~C~~~~~~~l~~l~~~~~-~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 103 (158)
T 3eyt_A 27 RGKVIVIEAFQ--MLCPGCVMHGIPLAQKVRAAFP-EDKVAVLGLHTVFEHHEAMTPISLKAFLHEYRIKFPVGVDQPGD 103 (158)
T ss_dssp TTSEEEEEEEC--TTCHHHHHTHHHHHHHHHHHSC-TTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCS
T ss_pred CCCEEEEEEEC--CcCcchhhhhhHHHHHHHHHhC-cCCEEEEEEEecccccccCCHHHHHHHHHHcCCCceEEEcCccc
Confidence 57899999999 999999 56677777774 3479999998631 000000
Q ss_pred ---HHHHhhcCcc-CceEEEec
Q psy3889 87 ---EDLAKRGCLT-PQLLWAFC 104 (243)
Q Consensus 87 ---~~l~~~~~V~-~PTi~lF~ 104 (243)
..+++.|+|. +||++++.
T Consensus 104 ~~~~~~~~~~~v~~~P~~~lid 125 (158)
T 3eyt_A 104 GAMPRTMAAYQMRGTPSLLLID 125 (158)
T ss_dssp SSSCHHHHHTTCCSSSEEEEEC
T ss_pred hhhHHHHHHcCCCCCCEEEEEC
Confidence 1588899999 99888774
No 154
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=98.69 E-value=7.1e-09 Score=76.10 Aligned_cols=51 Identities=14% Similarity=0.079 Sum_probs=38.6
Q ss_pred EEEEEecCCCCCCcHHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhcCccCceEEE
Q psy3889 42 LVKFDIAYPYGAKHEAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRGCLTPQLLWA 102 (243)
Q Consensus 42 lV~FyA~~pWC~~cp~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~~V~~PTi~l 102 (243)
++.||+ |||++|.....+-+..+.+ . +.+||++ ++++++++|++++||+++
T Consensus 3 vv~f~a--~~C~~C~~~~~~L~~~~~~-~--~~~vdid-----~~~~l~~~~g~~vPtl~~ 53 (87)
T 1ttz_A 3 LTLYQR--DDCHLCDQAVEALAQARAG-A--FFSVFID-----DDAALESAYGLRVPVLRD 53 (87)
T ss_dssp EEEEEC--SSCHHHHHHHHHHHHTTCC-C--EEEEECT-----TCHHHHHHHTTTCSEEEC
T ss_pred EEEEEC--CCCchHHHHHHHHHHHHHh-h--eEEEECC-----CCHHHHHHhCCCcCeEEE
Confidence 678999 9999994444443333221 1 6899997 789999999999999986
No 155
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=98.68 E-value=1.3e-08 Score=79.58 Aligned_cols=61 Identities=13% Similarity=0.078 Sum_probs=45.1
Q ss_pred cCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCC------------------CcccHHHHhhcC
Q psy3889 37 KFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYG------------------ERDNEDLAKRGC 94 (243)
Q Consensus 37 ~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~------------------~~~n~~l~~~~~ 94 (243)
.+++++|.||+ +||++| |.+.++++. +++.+..|++++-. ...+..++++|+
T Consensus 41 ~gk~~ll~f~~--~~C~~C~~~~~~l~~l~~~----~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 114 (156)
T 1kng_A 41 KGKVSLVNVWA--SWCVPCHDEAPLLTELGKD----KRFQLVGINYKDAADNARRFLGRYGNPFGRVGVDANGRASIEWG 114 (156)
T ss_dssp TTSCEEEEEEC--TTCHHHHHHHHHHHHHTTC----TTSEEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTSHHHHHTT
T ss_pred CCCEEEEEEEc--ccCHhHHHHHHHHHHHHhc----CCeEEEEEECCCCHHHHHHHHHHcCCCCceeeeCchhHHHHhcC
Confidence 57899999999 999999 566655433 46999999874200 013567899999
Q ss_pred cc-CceEEEe
Q psy3889 95 LT-PQLLWAF 103 (243)
Q Consensus 95 V~-~PTi~lF 103 (243)
|. +||++++
T Consensus 115 v~~~P~~~~i 124 (156)
T 1kng_A 115 VYGVPETFVV 124 (156)
T ss_dssp CCSSCEEEEE
T ss_pred cCccCeEEEE
Confidence 99 9976666
No 156
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=98.65 E-value=4e-08 Score=76.40 Aligned_cols=64 Identities=14% Similarity=0.086 Sum_probs=48.3
Q ss_pred cCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcc----------------------cHHHH
Q psy3889 37 KFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERD----------------------NEDLA 90 (243)
Q Consensus 37 ~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~----------------------n~~l~ 90 (243)
++++|+|.||+ +||++| |.+.++.+.++. .++.|..|+++. +... +..++
T Consensus 31 ~gk~vll~F~a--~wC~~C~~~~~~l~~l~~~~~~-~~~~vv~vs~d~-~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 106 (143)
T 4fo5_A 31 LGRYTLLNFWA--AYDAESRARNVQLANEVNKFGP-DKIAMCSISMDE-KESIFTETVKIDKLDLSTQFHEGLGKESELY 106 (143)
T ss_dssp SCCEEEEEEEC--TTCHHHHHHHHHHHHHHTTSCT-TTEEEEEEECCS-CHHHHHHHHHHHTCCGGGEEECTTGGGSHHH
T ss_pred CCCEEEEEEEc--CcCHHHHHHHHHHHHHHHHhCc-CCEEEEEEEccC-CHHHHHHHHHHhCCCCceeeecccccchHHH
Confidence 57899999999 999999 888888888853 479999998852 1100 13577
Q ss_pred hhcCcc-CceEEEec
Q psy3889 91 KRGCLT-PQLLWAFC 104 (243)
Q Consensus 91 ~~~~V~-~PTi~lF~ 104 (243)
+.|+|. +||.+++.
T Consensus 107 ~~~~v~~~P~~~lid 121 (143)
T 4fo5_A 107 KKYDLRKGFKNFLIN 121 (143)
T ss_dssp HHTTGGGCCCEEEEC
T ss_pred HHcCCCCCCcEEEEC
Confidence 778888 88777664
No 157
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=98.65 E-value=4.8e-08 Score=76.33 Aligned_cols=65 Identities=12% Similarity=0.124 Sum_probs=50.2
Q ss_pred cCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCC------------------cccHHHHhhcC
Q psy3889 37 KFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGE------------------RDNEDLAKRGC 94 (243)
Q Consensus 37 ~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~------------------~~n~~l~~~~~ 94 (243)
.+++++|.||+ +||++| |.+.++.+.+.. .++.+..|+++..+. ..+..++++|+
T Consensus 27 ~gk~vll~f~~--~~C~~C~~~~~~l~~~~~~~~~-~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 103 (154)
T 3kcm_A 27 KGQVVIVNFWA--TWCPPCREEIPSMMRLNAAMAG-KPFRMLCVSIDEGGKVAVEEFFRKTGFTLPVLLDADKRVGKLYG 103 (154)
T ss_dssp TTSEEEEEEEC--TTCHHHHHHHHHHHHHHHHTTT-SSEEEEEEECCTTHHHHHHHHHHHHCCCCCEEECTTCHHHHHHT
T ss_pred CCCEEEEEEEC--CCCHHHHHHHHHHHHHHHHhcc-CCeEEEEEEcCCcchHHHHHHHHHcCCCeeEEecCchHHHHHhC
Confidence 67899999999 999999 889999988853 478999999862100 01244889999
Q ss_pred cc-CceEEEec
Q psy3889 95 LT-PQLLWAFC 104 (243)
Q Consensus 95 V~-~PTi~lF~ 104 (243)
|. +|+++++.
T Consensus 104 v~~~P~~~lid 114 (154)
T 3kcm_A 104 TTGVPETFVID 114 (154)
T ss_dssp CCSBCEEEEEC
T ss_pred CCCCCeEEEEC
Confidence 99 99777664
No 158
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=98.65 E-value=3e-08 Score=78.51 Aligned_cols=65 Identities=14% Similarity=0.089 Sum_probs=49.7
Q ss_pred cCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCc---------------ccH---HHHhhcC
Q psy3889 37 KFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGER---------------DNE---DLAKRGC 94 (243)
Q Consensus 37 ~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~---------------~n~---~l~~~~~ 94 (243)
.+++++|.||+ +||++| |.+.++.+.++. .++.|..|++++..+. .+. .++++|+
T Consensus 34 ~gk~vll~F~a--~wC~~C~~~~~~l~~l~~~~~~-~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 110 (152)
T 2lrt_A 34 KGKVVLIDFTV--YNNAMSAAHNLALRELYNKYAS-QGFEIYQISLDGDEHFWKTSADNLPWVCVRDANGAYSSYISLYN 110 (152)
T ss_dssp GGSEEEEEEEC--TTCHHHHHHHHHHHHHHHHHGG-GTEEEEEEECSCCHHHHHHHHTTCSSEEEECSSGGGCHHHHHHT
T ss_pred CCCEEEEEEEc--CCChhhHHHHHHHHHHHHHhcc-CCeEEEEEEccCCHHHHHHHHhCCCceEEECCCCcchHHHHHcC
Confidence 46899999999 999999 899999998864 3699999998621000 000 2888899
Q ss_pred cc-CceEEEec
Q psy3889 95 LT-PQLLWAFC 104 (243)
Q Consensus 95 V~-~PTi~lF~ 104 (243)
|. +||++++.
T Consensus 111 v~~~P~~~lid 121 (152)
T 2lrt_A 111 VTNLPSVFLVN 121 (152)
T ss_dssp CCSCSEEEEEE
T ss_pred cccCceEEEEC
Confidence 99 99988874
No 159
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=98.08 E-value=3.3e-09 Score=81.97 Aligned_cols=66 Identities=9% Similarity=0.003 Sum_probs=49.9
Q ss_pred cCC-eEEEEEEecCCCCCCc----HHHHHHHHHccC-CCCcEEEEEecccCCC--------------------cccHHHH
Q psy3889 37 KFH-TTLVKFDIAYPYGAKH----EAFLEVAESSKH-QPDFLVAEVGVKDYGE--------------------RDNEDLA 90 (243)
Q Consensus 37 ~~k-~vlV~FyA~~pWC~~c----p~~~~lA~~~~~-~~~v~vakVd~~d~~~--------------------~~n~~l~ 90 (243)
.++ +++|.||+ +||++| |.+.++++.++. .+++.+..|++++..+ ..+..++
T Consensus 24 ~gk~~vll~F~a--~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (143)
T 2lus_A 24 KDKDIIGFYFSA--HWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSDRSEDDMFQYMMESHGDWLAIPYRSGPASNVT 101 (143)
Confidence 456 99999999 999999 889998888842 2478888888862110 0124788
Q ss_pred hhcCcc-CceEEEec
Q psy3889 91 KRGCLT-PQLLWAFC 104 (243)
Q Consensus 91 ~~~~V~-~PTi~lF~ 104 (243)
++|+|. +||++++.
T Consensus 102 ~~~~v~~~P~~~lid 116 (143)
T 2lus_A 102 AKYGITGIPALVIVK 116 (143)
Confidence 899999 99988775
No 160
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=98.63 E-value=9.3e-08 Score=77.32 Aligned_cols=69 Identities=7% Similarity=-0.003 Sum_probs=54.2
Q ss_pred hhHHHHh----ccCCeEEEEEEecCCCCCCcHHHH-------HHHHHccCCCCcEEEEEecccCCCcccHHHHhhcCcc-
Q psy3889 29 HNFDKIL----SKFHTTLVKFDIAYPYGAKHEAFL-------EVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRGCLT- 96 (243)
Q Consensus 29 ~nF~~~v----~~~k~vlV~FyA~~pWC~~cp~~~-------~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~~V~- 96 (243)
.+|++.+ ..+|++||.||+ +||..|..++ ++++.+. .++++.++|.+ +.++..++++|++.
T Consensus 29 ~~~~~Al~~Ak~~~K~vlvd~~a--~wC~~C~~me~~vf~d~~V~~~l~--~~fv~v~~d~~---~~~~~~l~~~y~v~~ 101 (153)
T 2dlx_A 29 GSFETAKECGQMQNKWLMINIQN--VQDFACQCLNRDVWSNEAVKNIIR--EHFIFWQVYHD---SEEGQRYIQFYKLGD 101 (153)
T ss_dssp SCHHHHHHHHHHHTCEEEEEEEC--SCTTTHHHHHHHTTTCHHHHHHHH--HTEEEEEEESS---SHHHHHHHHHHTCCS
T ss_pred cCHHHHHHHHHHcCCeEEEEEEC--CCCHhHHHHHHHhcCCHHHHHHHH--cCeEEEEEecC---CHhHHHHHHHcCCCC
Confidence 4677654 458999999999 9999996663 3454442 27899999985 34568899999999
Q ss_pred CceEEEec
Q psy3889 97 PQLLWAFC 104 (243)
Q Consensus 97 ~PTi~lF~ 104 (243)
+||++++.
T Consensus 102 ~P~~~fld 109 (153)
T 2dlx_A 102 FPYVSILD 109 (153)
T ss_dssp SSEEEEEC
T ss_pred CCEEEEEe
Confidence 99999885
No 161
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=98.62 E-value=5.8e-08 Score=78.69 Aligned_cols=40 Identities=10% Similarity=0.060 Sum_probs=33.9
Q ss_pred cCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCc------EEEEEecc
Q psy3889 37 KFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDF------LVAEVGVK 79 (243)
Q Consensus 37 ~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v------~vakVd~~ 79 (243)
+++++||.||+ +||++| |.+.++.+.+.. ..+ .|..|+++
T Consensus 58 ~gk~vlv~F~a--~~C~~C~~~~~~l~~l~~~~~~-~~~~~~~~v~~v~v~~d 107 (183)
T 3lwa_A 58 ENQVVILNAWG--QWCAPCRSESDDLQIIHEELQA-AGNGDTPGGTVLGINVR 107 (183)
T ss_dssp TTSEEEEEEEC--TTCHHHHHHHHHHHHHHHHHHH-CC---CCSEEEEEEECS
T ss_pred CCCEEEEEEEC--CcCHhHHHHHHHHHHHHHHHHh-cCCCccCCcEEEEEECC
Confidence 57899999999 999999 899999998853 235 99999996
No 162
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=98.61 E-value=1.3e-07 Score=75.06 Aligned_cols=63 Identities=10% Similarity=0.103 Sum_probs=49.6
Q ss_pred cCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEeccc-------------CCCccc-------------
Q psy3889 37 KFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKD-------------YGERDN------------- 86 (243)
Q Consensus 37 ~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d-------------~~~~~n------------- 86 (243)
+++++||.||+ +||++| |.+.++.+.+. ++.|..|+++. +.+..+
T Consensus 36 ~gk~~lv~F~~--~~C~~C~~~~~~l~~l~~~~~---~v~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (165)
T 3ha9_A 36 GGDVVILWFMA--AWCPSCVYMADLLDRLTEKYR---EISVIAIDFWTAEALKALGLNKPGYPPPDTPEMFRKFIANYGD 110 (165)
T ss_dssp CSSEEEEEEEC--TTCTTHHHHHHHHHHHHHHCT---TEEEEEEECCSHHHHHHHTCCSTTSCCCCCHHHHHHHHHHHSC
T ss_pred CCCEEEEEEEC--CCCcchhhhHHHHHHHHHHcC---CcEEEEEEecccccccccccccccCCCCCCHHHHHHHHHHcCC
Confidence 67899999999 999999 89999998885 79999998851 000011
Q ss_pred ---------HHHHhhcCcc-CceEEEec
Q psy3889 87 ---------EDLAKRGCLT-PQLLWAFC 104 (243)
Q Consensus 87 ---------~~l~~~~~V~-~PTi~lF~ 104 (243)
.++++.|+|. +||++++.
T Consensus 111 ~~~~~~~d~~~~~~~~~v~~~P~~~lid 138 (165)
T 3ha9_A 111 PSWIMVMDDGSLVEKFNVRSIDYIVIMD 138 (165)
T ss_dssp TTSEEEECCSHHHHHTTCCSSSEEEEEE
T ss_pred CCeeEEeChHHHHHHhCCCCceEEEEEc
Confidence 3788899999 99988773
No 163
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=98.52 E-value=1.1e-07 Score=77.26 Aligned_cols=64 Identities=14% Similarity=0.116 Sum_probs=51.4
Q ss_pred cCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCC-----C-------------------cccHH
Q psy3889 37 KFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYG-----E-------------------RDNED 88 (243)
Q Consensus 37 ~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~-----~-------------------~~n~~ 88 (243)
.++++||.||+ +||++| |.+.++.+.+.. . +.|..|+++... . ..+.+
T Consensus 32 ~gk~vlv~F~a--~~C~~C~~~~~~l~~l~~~~~~-~-~~~v~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~ 107 (188)
T 2cvb_A 32 HEPLLAVVFMC--NHCPYVKGSIGELVALAERYRG-K-VAFVGINANDYEKYPEDAPEKMAAFAEEHGIFFPYLLDETQE 107 (188)
T ss_dssp CSSEEEEEEEC--SSCHHHHTTHHHHHHHHHHTTT-T-EEEEEEECCCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSSH
T ss_pred CCCEEEEEEEC--CCCccHHHHHHHHHHHHHHhhc-C-eEEEEEEcCccccccccCHHHHHHHHHHhCCCceEEECCcch
Confidence 46899999999 999999 899999999864 3 999999984210 0 13567
Q ss_pred HHhhcCcc-CceEEEec
Q psy3889 89 LAKRGCLT-PQLLWAFC 104 (243)
Q Consensus 89 l~~~~~V~-~PTi~lF~ 104 (243)
+++.|+|. +||++++.
T Consensus 108 ~~~~~~v~~~P~~~lid 124 (188)
T 2cvb_A 108 VAKAYRALRTPEVFLFD 124 (188)
T ss_dssp HHHHTTCCEESEEEEEC
T ss_pred HHHHcCCCCCCeEEEEC
Confidence 89999999 99998884
No 164
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=98.51 E-value=1.7e-07 Score=76.11 Aligned_cols=61 Identities=13% Similarity=0.063 Sum_probs=44.5
Q ss_pred cCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCC------------------CcccHHHHhhcC
Q psy3889 37 KFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYG------------------ERDNEDLAKRGC 94 (243)
Q Consensus 37 ~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~------------------~~~n~~l~~~~~ 94 (243)
.+++++|.||+ +||++| |.+.++.+. ++.|..|++++.. ...+..+++.|+
T Consensus 57 ~gk~vll~F~a--~~C~~C~~~~~~l~~l~~~-----~v~vv~vs~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 129 (176)
T 3kh7_A 57 KGKPALVNVWG--TWCPSCRVEHPELTRLAEQ-----GVVIYGINYKDDNAAAIKWLNELHNPYLLSISDADGTLGLDLG 129 (176)
T ss_dssp CSSCEEEEEEC--TTCHHHHHHHHHHHHHHHT-----TCEEEEEEESCCHHHHHHHHHHTTCCCSEEEEETTCHHHHHHT
T ss_pred CCCEEEEEEEC--CcCHHHHHHHHHHHHHHHC-----CCEEEEEeCCCCHHHHHHHHHHcCCCCceEEECCcchHHHHcC
Confidence 57899999999 999999 677776654 5888888863200 013467888888
Q ss_pred cc-CceEEEec
Q psy3889 95 LT-PQLLWAFC 104 (243)
Q Consensus 95 V~-~PTi~lF~ 104 (243)
|. +|+++++.
T Consensus 130 v~~~P~~~lid 140 (176)
T 3kh7_A 130 VYGAPETYLID 140 (176)
T ss_dssp CCSSCEEEEEC
T ss_pred CCCCCeEEEEC
Confidence 88 89777664
No 165
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=98.50 E-value=1e-06 Score=74.58 Aligned_cols=78 Identities=9% Similarity=-0.008 Sum_probs=65.3
Q ss_pred CCCceEcChhhHHHHhccC-CeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhcC
Q psy3889 20 SKGHVSLDTHNFDKILSKF-HTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRGC 94 (243)
Q Consensus 20 ~~~v~~L~~~nF~~~v~~~-k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~~ 94 (243)
.+.|.++|.+|+.++...+ +.+++.|+. +||++| +.|.++|+.+++ ++.|+.+|++ +..+..+++.||
T Consensus 112 ~plv~e~t~~n~~~~~~~~~~~~~l~f~~--~~~~~~~~~~~~~~~vAk~~k~--~i~F~~vd~~---~~~~~~~l~~fg 184 (227)
T 4f9z_D 112 LHMVTEYNPVTVIGLFNSVIQIHLLLIMN--KASPEYEENMHRYQKAAKLFQG--KILFILVDSG---MKENGKVISFFK 184 (227)
T ss_dssp CCSEEECCHHHHHHHHHSSCCEEEEEEEC--TTSTTHHHHHHHHHHHHHHTTT--TCEEEEEETT---SGGGHHHHHHTT
T ss_pred CCceeecCcccHHHHhccCCceEEEEEEc--CCcchHHHHHHHHHHHHHHhhC--CEEEEEeCCc---cHhHHHHHHHcC
Confidence 4568999999999998554 566677888 999999 899999999975 6999999995 224778899999
Q ss_pred cc---CceEEEec
Q psy3889 95 LT---PQLLWAFC 104 (243)
Q Consensus 95 V~---~PTi~lF~ 104 (243)
+. +|++.++.
T Consensus 185 l~~~~~P~~~i~~ 197 (227)
T 4f9z_D 185 LKESQLPALAIYQ 197 (227)
T ss_dssp CCGGGCSEEEEEE
T ss_pred CCcccCCEEEEEE
Confidence 97 99999987
No 166
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=98.47 E-value=4.1e-07 Score=73.65 Aligned_cols=60 Identities=18% Similarity=0.197 Sum_probs=47.2
Q ss_pred cCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhcCcc-Cce
Q psy3889 37 KFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRGCLT-PQL 99 (243)
Q Consensus 37 ~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~~V~-~PT 99 (243)
.+++++|.||+ +||++| |.+.++.+.+. ..++.|..|+++..+......+++++++. +|.
T Consensus 59 ~gk~vll~F~a--~~C~~C~~~~~~l~~l~~~~~-~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~ 123 (186)
T 1jfu_A 59 RGKTLLVNLWA--TWCVPCRKEMPALDELQGKLS-GPNFEVVAINIDTRDPEKPKTFLKEANLTRLGY 123 (186)
T ss_dssp TTSEEEEEEEC--TTCHHHHHHHHHHHHHHHHHC-BTTEEEEEEECCCSCTTHHHHHHHHTTCCTTCC
T ss_pred CCCEEEEEEEe--CCCHhHHHHHHHHHHHHHHhc-cCCcEEEEEECCCCCHHHHHHHHHHcCCCCCce
Confidence 57899999999 999999 88999998885 35799999998632122347788888886 664
No 167
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=98.46 E-value=2.4e-07 Score=65.70 Aligned_cols=53 Identities=15% Similarity=0.162 Sum_probs=41.1
Q ss_pred EEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhcC--cc-CceE
Q psy3889 42 LVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRGC--LT-PQLL 100 (243)
Q Consensus 42 lV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~~--V~-~PTi 100 (243)
++.|++ |||++| |.+++++..+. ++.+..+|+++ +.....+++++++ +. +||+
T Consensus 3 v~~f~~--~~C~~C~~~~~~l~~l~~~~~---~i~~~~vdi~~-~~~~~~~l~~~~~~~~~~vP~i 62 (85)
T 1ego_A 3 TVIFGR--SGCPYCVRAKDLAEKLSNERD---DFQYQYVDIRA-EGITKEDLQQKAGKPVETVPQI 62 (85)
T ss_dssp EEEECC--TTSTHHHHHHHHHHHHHHHHS---SCEEEEECHHH-HTCCSHHHHHHTCCCSCCSCEE
T ss_pred EEEEeC--CCCCCHHHHHHHHHHHHhcCC---CceEEEEeccc-ChHHHHHHHHHhCCCCceeCeE
Confidence 677999 999999 78888877653 58899999962 1111258999999 89 9998
No 168
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=98.44 E-value=2.6e-07 Score=84.18 Aligned_cols=65 Identities=11% Similarity=-0.050 Sum_probs=51.9
Q ss_pred cCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCC----------------------cccHHHH
Q psy3889 37 KFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGE----------------------RDNEDLA 90 (243)
Q Consensus 37 ~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~----------------------~~n~~l~ 90 (243)
.+++|||.||+ +||++| |.+.++++.++. .++.|..|+++.+.. ..+..++
T Consensus 81 ~GK~vLl~F~a--twC~~C~~~~p~L~~l~~~~~~-~~v~vi~Vs~d~~~~~d~~~~~~~~~~~~~l~fpv~~D~~~~l~ 157 (352)
T 2hyx_A 81 RGKVVLIDFWA--YSCINCQRAIPHVVGWYQAYKD-SGLAVIGVHTPEYAFEKVPGNVAKGAANLGISYPIALDNNYATW 157 (352)
T ss_dssp TTSEEEEEEEC--TTCHHHHHHHHHHHHHHHHHGG-GTEEEEEEECCSSGGGGCHHHHHHHHHHHTCCSCEEECTTSHHH
T ss_pred CCCEEEEEEEC--CCChhHHHHHHHHHHHHHHhhc-CCeEEEEEECCcccccCCHHHHHHHHHHcCCCccEEeCCcHHHH
Confidence 47899999999 999999 899999999863 469999998752100 0235789
Q ss_pred hhcCcc-CceEEEec
Q psy3889 91 KRGCLT-PQLLWAFC 104 (243)
Q Consensus 91 ~~~~V~-~PTi~lF~ 104 (243)
++|+|. +||++++.
T Consensus 158 ~~ygV~~~Pt~~lID 172 (352)
T 2hyx_A 158 TNYRNRYWPAEYLID 172 (352)
T ss_dssp HHTTCCEESEEEEEC
T ss_pred HHcCCCccCEEEEEe
Confidence 999999 99988883
No 169
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=98.42 E-value=2.9e-07 Score=69.07 Aligned_cols=57 Identities=16% Similarity=0.185 Sum_probs=40.4
Q ss_pred hhHHHHhccCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCccc-----HHHHhhcCcc-Cc
Q psy3889 29 HNFDKILSKFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDN-----EDLAKRGCLT-PQ 98 (243)
Q Consensus 29 ~nF~~~v~~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n-----~~l~~~~~V~-~P 98 (243)
+.+++++++ +.+++ ||+ |||++| |.+++++. .+.+..||.+ .+ .+++++|+|. +|
T Consensus 11 ~~~~~~~~~-~~vv~-f~a--~~C~~C~~~~~~l~~~~~------~~~~v~v~~~-----~~~~~~~~~l~~~~~v~~~P 75 (116)
T 2e7p_A 11 KKAKELASS-APVVV-FSK--TYCGYCNRVKQLLTQVGA------SYKVVELDEL-----SDGSQLQSALAHWTGRGTVP 75 (116)
T ss_dssp HHHHHHHTS-SSEEE-EEC--TTCHHHHHHHHHHHHHTC------CCEEEEGGGS-----TTHHHHHHHHHHHHSCCSSC
T ss_pred HHHHHHHcC-CCEEE-EEC--CCChhHHHHHHHHHHcCC------CeEEEEccCC-----CChHHHHHHHHHHhCCCCcC
Confidence 456666654 45666 999 999999 66665532 3556666554 33 5799999999 99
Q ss_pred eE
Q psy3889 99 LL 100 (243)
Q Consensus 99 Ti 100 (243)
|+
T Consensus 76 t~ 77 (116)
T 2e7p_A 76 NV 77 (116)
T ss_dssp EE
T ss_pred EE
Confidence 99
No 170
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=98.41 E-value=4.2e-07 Score=64.35 Aligned_cols=57 Identities=9% Similarity=-0.013 Sum_probs=36.0
Q ss_pred EEEEEecCCCCCCcHHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhcCcc-CceEEE
Q psy3889 42 LVKFDIAYPYGAKHEAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRGCLT-PQLLWA 102 (243)
Q Consensus 42 lV~FyA~~pWC~~cp~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~~V~-~PTi~l 102 (243)
++.||+ |||++|.......+.+....++.+-.++++. +.++.+++++||++ +||+++
T Consensus 4 ~~~f~~--~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~--~~~~~~~~~~~gv~~vPt~~i 61 (80)
T 2k8s_A 4 KAIFYH--AGCPVCVSAEQAVANAIDPSKYTVEIVHLGT--DKARIAEAEKAGVKSVPALVI 61 (80)
T ss_dssp EEEEEE--CSCHHHHHHHHHHHHHSCTTTEEEEEEETTT--CSSTHHHHHHHTCCEEEEEEE
T ss_pred eEEEeC--CCCCchHHHHHHHHHHHHhcCCeEEEEEecC--ChhhHHHHHHcCCCcCCEEEE
Confidence 677999 9999994444333332222234444444431 12467899999999 999975
No 171
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=98.41 E-value=2e-07 Score=75.99 Aligned_cols=65 Identities=12% Similarity=0.102 Sum_probs=50.9
Q ss_pred cCC-eEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCC-----C-------------------cccH
Q psy3889 37 KFH-TTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYG-----E-------------------RDNE 87 (243)
Q Consensus 37 ~~k-~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~-----~-------------------~~n~ 87 (243)
.++ ++||.||+ +||++| |.+.++.+.+.. .++.|..|+++... . ..+.
T Consensus 44 ~gk~~vlv~F~a--~~C~~C~~~~~~l~~l~~~~~~-~~v~vv~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~ 120 (196)
T 2ywi_A 44 KSDAATVIMFIC--NHCPFVKHVQHELVRLANDYMP-KGVSFVAINSNDAEQYPEDSPENMKKVAEELGYPFPYLYDETQ 120 (196)
T ss_dssp CCSSEEEEEECC--SSCHHHHHHHHHHHHHHHHHGG-GTCEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSC
T ss_pred CCCCeEEEEEeC--CCCccHHHHHHHHHHHHHHHHh-CCcEEEEEECCccccccccCHHHHHHHHHHcCCCceEEECCch
Confidence 445 59999999 999999 899999988863 36999999984210 0 1356
Q ss_pred HHHhhcCcc-CceEEEec
Q psy3889 88 DLAKRGCLT-PQLLWAFC 104 (243)
Q Consensus 88 ~l~~~~~V~-~PTi~lF~ 104 (243)
+++++|+|. +||++++.
T Consensus 121 ~~~~~~~v~~~P~~~lid 138 (196)
T 2ywi_A 121 EVAKAYDAACTPDFYIFD 138 (196)
T ss_dssp HHHHHHTCCEESEEEEEE
T ss_pred HHHHHhCCCCCCeEEEEc
Confidence 789999999 99998884
No 172
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=98.37 E-value=1.4e-06 Score=69.25 Aligned_cols=41 Identities=15% Similarity=0.144 Sum_probs=35.0
Q ss_pred cCCeEEEEEEecCCCCCC-c----HHHHHHHHHccC---CCCcEEEEEecc
Q psy3889 37 KFHTTLVKFDIAYPYGAK-H----EAFLEVAESSKH---QPDFLVAEVGVK 79 (243)
Q Consensus 37 ~~k~vlV~FyA~~pWC~~-c----p~~~~lA~~~~~---~~~v~vakVd~~ 79 (243)
.++++||.||+ +||++ | |.+.++.+.++. .+++.|..|++|
T Consensus 25 ~gk~vll~F~~--~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d 73 (171)
T 2rli_A 25 RGQWVLMYFGF--THCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVD 73 (171)
T ss_dssp TTSEEEEEEEC--TTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESC
T ss_pred CCCEEEEEEEc--CCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEEC
Confidence 46899999999 99998 9 889999988852 258999999885
No 173
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=97.72 E-value=4.7e-08 Score=77.20 Aligned_cols=59 Identities=12% Similarity=0.106 Sum_probs=41.0
Q ss_pred cCCeEEEEEEecCCCCCCc----HHHHH-HHHHccCCCCcEEEEEecccCCCcccHHHHhhcCccCc
Q psy3889 37 KFHTTLVKFDIAYPYGAKH----EAFLE-VAESSKHQPDFLVAEVGVKDYGERDNEDLAKRGCLTPQ 98 (243)
Q Consensus 37 ~~k~vlV~FyA~~pWC~~c----p~~~~-lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~~V~~P 98 (243)
.+++++|.||+ +||++| |.+.+ +...+....++.++.|++++. ......+.+++++.||
T Consensus 32 ~gk~vll~f~a--~~C~~C~~~~~~l~~~l~~~~~~~~~~~vv~v~~d~~-~~~~~~~~~~~~~~~~ 95 (159)
T 2ls5_A 32 RGKVVMLQFTA--SWCGVCRKEMPFIEKDIWLKHKDNADFALIGIDRDEP-LEKVLAFAKSTGVTYP 95 (159)
Confidence 56899999999 999999 78887 777775346799999998621 1122344444444343
No 174
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=98.35 E-value=1.3e-06 Score=68.76 Aligned_cols=41 Identities=15% Similarity=0.192 Sum_probs=34.8
Q ss_pred cCCeEEEEEEecCCCCCC-c----HHHHHHHHHccC---CCCcEEEEEecc
Q psy3889 37 KFHTTLVKFDIAYPYGAK-H----EAFLEVAESSKH---QPDFLVAEVGVK 79 (243)
Q Consensus 37 ~~k~vlV~FyA~~pWC~~-c----p~~~~lA~~~~~---~~~v~vakVd~~ 79 (243)
.+++++|.||+ +||++ | |.+.++.+.+.. .+++.+..|++|
T Consensus 22 ~gk~vll~f~~--~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d 70 (164)
T 2ggt_A 22 LGQWLLIYFGF--THCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISID 70 (164)
T ss_dssp TTCEEEEEEEC--TTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESC
T ss_pred CCCEEEEEEEe--CCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeC
Confidence 47899999999 99998 9 888999888853 247899999886
No 175
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=98.34 E-value=4.2e-07 Score=76.51 Aligned_cols=65 Identities=17% Similarity=0.089 Sum_probs=52.2
Q ss_pred cCC-eEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCC------------------------cccH
Q psy3889 37 KFH-TTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGE------------------------RDNE 87 (243)
Q Consensus 37 ~~k-~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~------------------------~~n~ 87 (243)
.++ .|||.||+ +||++| |.+.++.+.++. .++.|..|++++... ..+.
T Consensus 57 ~gk~~vll~F~a--~~C~~C~~~~~~l~~l~~~~~~-~~v~vv~Vs~d~~~~~~~d~~~~~~~~~~~~~~~~~~l~D~~~ 133 (218)
T 3u5r_E 57 KDSPALLVAFIS--NRCPFVVLIREALAKFAGDYAG-QGLAVVAINSNDAQAFPEETLERVGAEVKAYGYGFPYLKDASQ 133 (218)
T ss_dssp TTCSEEEEEECC--SSCHHHHTTHHHHHHHHHHHTT-TTEEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECTTC
T ss_pred CCCCeEEEEEEC--CCCccHHHHHHHHHHHHHHHHh-CCcEEEEEECCcccccccCCHHHHHHHHHHhCCCccEEECCcc
Confidence 456 59999999 999999 999999999963 469999999853211 1356
Q ss_pred HHHhhcCcc-CceEEEec
Q psy3889 88 DLAKRGCLT-PQLLWAFC 104 (243)
Q Consensus 88 ~l~~~~~V~-~PTi~lF~ 104 (243)
.+++.|+|. +||++++.
T Consensus 134 ~~~~~~~v~~~P~~~liD 151 (218)
T 3u5r_E 134 SVAKAYGAACTPDFFLYD 151 (218)
T ss_dssp HHHHHHTCCEESEEEEEC
T ss_pred HHHHHcCCCCCCeEEEEC
Confidence 789999999 99999884
No 176
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=98.31 E-value=1.7e-06 Score=73.11 Aligned_cols=72 Identities=7% Similarity=0.036 Sum_probs=61.3
Q ss_pred CCCceEc-ChhhHHHHhccCCeEEEEEEecCCCCCCc-HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhcCccC
Q psy3889 20 SKGHVSL-DTHNFDKILSKFHTTLVKFDIAYPYGAKH-EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRGCLTP 97 (243)
Q Consensus 20 ~~~v~~L-~~~nF~~~v~~~k~vlV~FyA~~pWC~~c-p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~~V~~ 97 (243)
++.+++| +.++|+++++.++.++|.||+ |||... |.|.++|+.+ . ++.|+.+ .+.++|++|+|+-
T Consensus 8 ~~~~~~l~s~~~~~~~l~~~~v~vVgff~--~~~~~~~~~f~~~A~~l-~--~~~F~~t--------~~~~v~~~~~v~~ 74 (227)
T 4f9z_D 8 AQEPTWLTDVPAAMEFIAATEVAVIGFFQ--DLEIPAVPILHSMVQKF-P--GVSFGIS--------TDSEVLTHYNITG 74 (227)
T ss_dssp -CCCEECCSHHHHHHHHHTSSEEEEEECS--CSCSTHHHHHHHHTTTC-T--TSEEEEE--------CCHHHHHHTTCCS
T ss_pred cCCCeeeCCHHHHHHHHhcCCeEEEEEec--CCCchhHHHHHHHHHhC-C--CceEEEE--------CCHHHHHHcCCCC
Confidence 3455666 669999999888999999999 999886 9999999988 3 7888874 4578999999999
Q ss_pred ceEEEec
Q psy3889 98 QLLWAFC 104 (243)
Q Consensus 98 PTi~lF~ 104 (243)
|||++|+
T Consensus 75 p~i~lfk 81 (227)
T 4f9z_D 75 NTICLFR 81 (227)
T ss_dssp SEEEEEE
T ss_pred CeEEEEE
Confidence 9999998
No 177
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=98.26 E-value=1e-06 Score=65.53 Aligned_cols=57 Identities=18% Similarity=0.142 Sum_probs=43.0
Q ss_pred cCCeEEEEEEecCCCCCCcHHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhcCcc-CceEE
Q psy3889 37 KFHTTLVKFDIAYPYGAKHEAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRGCLT-PQLLW 101 (243)
Q Consensus 37 ~~k~vlV~FyA~~pWC~~cp~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~~V~-~PTi~ 101 (243)
...++++.|++ |||++|.....+-+.+.. ++.+..||++ +.++++++++|+ . +||++
T Consensus 14 ~~~~~v~~f~~--~~C~~C~~~~~~L~~l~~--~i~~~~vdi~---~~~~~el~~~~g-~~vP~l~ 71 (100)
T 1wjk_A 14 RALPVLTLFTK--APCPLCDEAKEVLQPYKD--RFILQEVDIT---LPENSTWYERYK-FDIPVFH 71 (100)
T ss_dssp CCCCEEEEEEC--SSCHHHHHHHHHTSTTSS--SSEEEEEETT---SSTTHHHHHHSS-SSCSEEE
T ss_pred CCCCEEEEEeC--CCCcchHHHHHHHHHhhh--CCeEEEEECC---CcchHHHHHHHC-CCCCEEE
Confidence 34578899999 999999555555444332 4899999996 225689999999 9 99873
No 178
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=98.25 E-value=9.9e-07 Score=70.00 Aligned_cols=41 Identities=17% Similarity=0.062 Sum_probs=34.4
Q ss_pred cCCeEEEEEEecCCCCCC-c----HHHHHHHHHccCC--CCcEEEEEecc
Q psy3889 37 KFHTTLVKFDIAYPYGAK-H----EAFLEVAESSKHQ--PDFLVAEVGVK 79 (243)
Q Consensus 37 ~~k~vlV~FyA~~pWC~~-c----p~~~~lA~~~~~~--~~v~vakVd~~ 79 (243)
++++++|.||+ +||++ | |.+.++.+.+... +++.|..|+++
T Consensus 34 ~gk~vll~f~~--~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d 81 (172)
T 2k6v_A 34 QDKVVLLFFGF--TRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVD 81 (172)
T ss_dssp TTSEEEEEEEC--TTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESC
T ss_pred CCCEEEEEEEC--CCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEEC
Confidence 57899999999 99998 9 7888888877532 37999999986
No 179
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=98.25 E-value=1.2e-06 Score=71.13 Aligned_cols=62 Identities=16% Similarity=0.142 Sum_probs=48.8
Q ss_pred cCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCC------CcccHHHHhh-cCccCceEE
Q psy3889 37 KFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYG------ERDNEDLAKR-GCLTPQLLW 101 (243)
Q Consensus 37 ~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~------~~~n~~l~~~-~~V~~PTi~ 101 (243)
++++|||.||+ +||++| |.+.++.+.++. .++.|..|++++++ .....+++++ +++.||.+.
T Consensus 37 ~Gk~vlv~F~a--twC~~C~~~~p~l~~l~~~~~~-~~~~vi~is~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 109 (180)
T 3kij_A 37 KGKVSLVVNVA--SDCQLTDRNYLGLKELHKEFGP-SHFSVLAFPCNQFGESEPRPSKEVESFARKNYGVTFPIFH 109 (180)
T ss_dssp TTSEEEEEEEC--SSSTTHHHHHHHHHHHHHHHTT-TSEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBC
T ss_pred CCCEEEEEEEe--cCCCCcHHHHHHHHHHHHHhcc-CCeEEEEEECCccccCCCCCHHHHHHHHHHhcCCCCceee
Confidence 67899999999 999999 899999999863 46999999876321 1223677888 998888754
No 180
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=98.24 E-value=3.2e-06 Score=67.70 Aligned_cols=40 Identities=10% Similarity=-0.004 Sum_probs=34.4
Q ss_pred cCCeEEEEEEecCCCCCCc---HHHHHHHHHccCCCCcEEEEEecc
Q psy3889 37 KFHTTLVKFDIAYPYGAKH---EAFLEVAESSKHQPDFLVAEVGVK 79 (243)
Q Consensus 37 ~~k~vlV~FyA~~pWC~~c---p~~~~lA~~~~~~~~v~vakVd~~ 79 (243)
.+++|||.||+ +||++| |.+.++.+.+.. .++.|..|+++
T Consensus 31 ~Gk~vll~F~a--~wC~~C~~~~~l~~l~~~~~~-~~v~vv~vs~d 73 (171)
T 3cmi_A 31 KGKVVLIVNVA--SKCGFTPQYKELEALYKRYKD-EGFTIIGFPCN 73 (171)
T ss_dssp TTCEEEEEEEE--SSSCCHHHHHHHHHHHHHHGG-GTEEEEEEEEC
T ss_pred CCCEEEEEEEe--cCCCcchhHHHHHHHHHHhcc-CCeEEEEEECc
Confidence 57899999999 999999 888888888864 46999999884
No 181
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=98.24 E-value=1.8e-06 Score=68.24 Aligned_cols=62 Identities=6% Similarity=0.056 Sum_probs=47.3
Q ss_pred cCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCc------ccHHH-HhhcCccCceEE
Q psy3889 37 KFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGER------DNEDL-AKRGCLTPQLLW 101 (243)
Q Consensus 37 ~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~------~n~~l-~~~~~V~~PTi~ 101 (243)
.++++||.||+ +||++| |.+.++.+.+.. .++.|..|+++++++. ....+ .+++++.||.+.
T Consensus 30 ~gk~vlv~f~a--~~C~~C~~~~~~l~~l~~~~~~-~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (169)
T 2v1m_A 30 RGHVCLIVNVA--CKCGATDKNYRQLQEMHTRLVG-KGLRILAFPCNQFGGQEPWAEAEIKKFVTEKYGVQFDMFS 102 (169)
T ss_dssp TTSEEEEEEEC--SSSTTHHHHHHHHHHHHHHHGG-GTEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSEEBC
T ss_pred CCCEEEEEEee--ccCCchHHHHHHHHHHHHHhhc-CCeEEEEEECCccCCCCCCCHHHHHHHHHHhcCCCCceEE
Confidence 57899999999 999999 899999998864 4699999998643211 12455 478888788664
No 182
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=98.23 E-value=2.1e-06 Score=70.03 Aligned_cols=62 Identities=8% Similarity=0.131 Sum_probs=48.7
Q ss_pred cCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCC------cccHHHHhhcCccCceEE
Q psy3889 37 KFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGE------RDNEDLAKRGCLTPQLLW 101 (243)
Q Consensus 37 ~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~------~~n~~l~~~~~V~~PTi~ 101 (243)
+++++||.||+ +||++| |.+.++.+.++. .++.|..|++++++. ....++++++++.||.+.
T Consensus 48 ~Gk~vlv~F~a--twC~~C~~~~~~l~~l~~~~~~-~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 119 (185)
T 2gs3_A 48 RGFVCIVTNVA--SQGGKTEVNYTQLVDLHARYAE-CGLRILAFPCNQFGKQEPGSNEEIKEFAAGYNVKFDMFS 119 (185)
T ss_dssp TTSEEEEEEEC--SSSTTHHHHHHHHHHHHHHHGG-GTEEEEEEECCTTTTCCCSCHHHHHHHHHHTTCCSEEBC
T ss_pred CCCEEEEEEec--CCCCchHHHHHHHHHHHHHhhc-CCeEEEEEECcccCCCCCCCHHHHHHHHHHcCCCCeeee
Confidence 56899999999 999999 899999998864 369999999863211 123677888998888764
No 183
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=98.22 E-value=1.1e-06 Score=71.46 Aligned_cols=62 Identities=15% Similarity=0.148 Sum_probs=48.0
Q ss_pred cCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCC------CcccHHHHhh-cCccCceEE
Q psy3889 37 KFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYG------ERDNEDLAKR-GCLTPQLLW 101 (243)
Q Consensus 37 ~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~------~~~n~~l~~~-~~V~~PTi~ 101 (243)
+++++||.||+ +||++| |.+.++.+.++. .++.|..|++++++ .....+++++ +++.||.+.
T Consensus 48 ~Gk~vlv~F~a--twC~~C~~~~p~l~~l~~~~~~-~~v~vv~vs~d~~~~~e~~~~~~~~~~~~~~~~~~~p~~~ 120 (181)
T 2p31_A 48 RGSVSLVVNVA--SECGFTDQHYRALQQLQRDLGP-HHFNVLAFPCNQFGQQEPDSNKEIESFARRTYSVSFPMFS 120 (181)
T ss_dssp TTSEEEEEEEC--SSSTTHHHHHHHHHHHHHHHGG-GTEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBC
T ss_pred CCCEEEEEEec--cCCCCcHHHHHHHHHHHHHhhc-CCEEEEEEECcCCCCCCCCCHHHHHHHHHhhcCCCceeEe
Confidence 57899999999 999999 899999999864 36999999986422 1123566777 888888664
No 184
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=98.21 E-value=1.5e-06 Score=68.75 Aligned_cols=62 Identities=11% Similarity=0.013 Sum_probs=46.9
Q ss_pred cCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCC------CcccHHHHh-hcCccCceEE
Q psy3889 37 KFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYG------ERDNEDLAK-RGCLTPQLLW 101 (243)
Q Consensus 37 ~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~------~~~n~~l~~-~~~V~~PTi~ 101 (243)
.+++|||.||+ +||++| |.+.++.+.+++ .++.|..|+++.++ .....++++ +|++.||.+.
T Consensus 31 ~gk~vll~f~a--~~C~~C~~~~~~l~~l~~~~~~-~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (170)
T 2p5q_A 31 KGKVLLIVNVA--SKCGMTNSNYAEMNQLYEKYKD-QGLEILAFPCNQFGEEEPGTNDQITDFVCTRFKSEFPIFD 103 (170)
T ss_dssp TTSEEEEEEEC--SSSTTHHHHHHHHHHHHHHHGG-GTEEEEEEECCTTTTCCCSCHHHHHHHHHHHTCCCSCBBC
T ss_pred CCCEEEEEEEe--ccCCccHHHHHHHHHHHHHhcc-CCEEEEEEECCCCCCCCCCCHHHHHHHHHHhcCCCceeEe
Confidence 57899999999 999999 899999998864 36999999986321 112255566 7887788663
No 185
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=98.19 E-value=8.5e-06 Score=63.40 Aligned_cols=71 Identities=7% Similarity=0.032 Sum_probs=61.0
Q ss_pred ceEc-ChhhHHHHhccCCeEEEEEEecCCCCCCc-HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhcCccCceE
Q psy3889 23 HVSL-DTHNFDKILSKFHTTLVKFDIAYPYGAKH-EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRGCLTPQLL 100 (243)
Q Consensus 23 v~~L-~~~nF~~~v~~~k~vlV~FyA~~pWC~~c-p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~~V~~PTi 100 (243)
+..| +...+++.+...+.++|-|++ +||+.| +.|.++|+.+ . ++.|+.++ +.+++++|++..|++
T Consensus 23 ~~~i~s~~e~e~fi~~~~v~VVGfF~--~~~~~~~~~F~~~A~~~-~--d~~F~~t~--------~~~v~~~~~v~~~~v 89 (124)
T 2l4c_A 23 PTWLTDVPAAMEFIAATEVAVIGFFQ--DLEIPAVPILHSMVQKF-P--GVSFGIST--------DSEVLTHYNITGNTI 89 (124)
T ss_dssp CEECCSHHHHHHHHHTSSEEEEEECS--CTTSTHHHHHHHHHHHC-T--TSEEEEEC--------CHHHHHHTTCCSSCE
T ss_pred ceEcCCHHHHHHHHhcCCCEEEEEEC--CCCChhHHHHHHHHHhC-C--CceEEEEC--------hHHHHHHcCCCCCeE
Confidence 4445 568899999888899999999 999999 9999999998 3 78998873 477999999999999
Q ss_pred EEeccc
Q psy3889 101 WAFCVA 106 (243)
Q Consensus 101 ~lF~~~ 106 (243)
.+|++.
T Consensus 90 vlfkkf 95 (124)
T 2l4c_A 90 CLFRLV 95 (124)
T ss_dssp EEEETT
T ss_pred EEEEcC
Confidence 999954
No 186
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=98.17 E-value=1.9e-06 Score=69.97 Aligned_cols=62 Identities=6% Similarity=0.083 Sum_probs=48.3
Q ss_pred cCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCC------CcccHHHHhhcCccCceEE
Q psy3889 37 KFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYG------ERDNEDLAKRGCLTPQLLW 101 (243)
Q Consensus 37 ~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~------~~~n~~l~~~~~V~~PTi~ 101 (243)
.++++||.||+ +||++| |.+.++.+.+.. .++.|..|++++++ .....++++++++.||.+.
T Consensus 46 ~gk~vll~F~a--twC~~C~~~~~~l~~l~~~~~~-~~v~vv~vs~d~~~~~e~~~~~~~~~~~~~~~~~~p~~~ 117 (183)
T 2obi_A 46 RGFVCIVTNVA--SQCGKTEVNYTQLVDLHARYAE-CGLRILAFPCNQFGKQEPGSNEEIKEFAAGYNVKFDMFS 117 (183)
T ss_dssp TTSEEEEEEEC--SSSTTHHHHHHHHHHHHHHHGG-GTEEEEEEECCCSTTCCCSCHHHHHHHHHTTTCCSEEBC
T ss_pred CCCEEEEEEeC--CCCCCcHHHHHHHHHHHHHHhc-CCeEEEEEECCCCCCCCCCCHHHHHHHHHHcCCCceEEe
Confidence 57899999999 999999 899999998864 46999999986321 1124667788888888764
No 187
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=98.16 E-value=1.7e-06 Score=70.81 Aligned_cols=62 Identities=13% Similarity=0.049 Sum_probs=45.6
Q ss_pred cCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCC------CcccHHHHh-hcCccCceEE
Q psy3889 37 KFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYG------ERDNEDLAK-RGCLTPQLLW 101 (243)
Q Consensus 37 ~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~------~~~n~~l~~-~~~V~~PTi~ 101 (243)
++++|||.||+ +||++| |.+.++.+.++. .++.|..|++++++ .....++++ +|++.||.+.
T Consensus 45 ~Gk~vlv~F~a--twC~~C~~~~p~l~~l~~~~~~-~~~~vi~is~d~~~~~e~~~~~~~~~~~~~~~~~~~p~~~ 117 (187)
T 3dwv_A 45 KGSPLLIYNVA--SKCGYTKGGYETATTLYNKYKS-QGFTVLAFPSNQFGGQEPGNEEEIKEFVCTKFKAEFPIMA 117 (187)
T ss_dssp TTSCEEEEEEC--CBCSCCTTHHHHHHHHHHHHGG-GTCEEEEEEBCCCSSCSSSBTTHHHHSCCBCCCCSSCBBC
T ss_pred CCCEEEEEEec--CCCCCcHHHHHHHHHHHHHhhh-CCeEEEEEECcccCCCCCCCHHHHHHHHHhccCCCCceee
Confidence 57899999999 999999 999999999964 36999999886321 112233343 5677788764
No 188
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=98.16 E-value=3.6e-06 Score=70.57 Aligned_cols=62 Identities=11% Similarity=0.047 Sum_probs=46.5
Q ss_pred cCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCc------ccHHHHh------hcCccCceE
Q psy3889 37 KFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGER------DNEDLAK------RGCLTPQLL 100 (243)
Q Consensus 37 ~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~------~n~~l~~------~~~V~~PTi 100 (243)
++++|||.||| +||++| |.++++.+.++. .++.|..|++++++.+ .-.++++ +|+++||.+
T Consensus 46 ~Gk~vlv~Fwa--twC~~C~~e~p~l~~l~~~~~~-~g~~vv~v~~d~~~~~e~d~~~~i~~f~~~~~~~~~~~~~fp~l 122 (208)
T 2f8a_A 46 RGKVLLIENVA--SLGGTTVRDYTQMNELQRRLGP-RGLVVLGFPCNQFGHQENAKNEEILNSLKYVRPGGGFEPNFMLF 122 (208)
T ss_dssp TTSEEEEEEEC--SSSTTHHHHHHHHHHHHHHHGG-GTEEEEEEECCCSTTTTCSCHHHHHHHHHHTSSCTTCCCSSEEB
T ss_pred CCCEEEEEEEC--CCCccHHHHHHHHHHHHHHccC-CCeEEEEEECCcccccCCCCHHHHHHHHHhcccccccccceEEE
Confidence 57899999999 999999 889999998864 3699999998632111 1234454 788888865
Q ss_pred E
Q psy3889 101 W 101 (243)
Q Consensus 101 ~ 101 (243)
.
T Consensus 123 ~ 123 (208)
T 2f8a_A 123 E 123 (208)
T ss_dssp C
T ss_pred E
Confidence 3
No 189
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=98.14 E-value=4.1e-06 Score=68.53 Aligned_cols=62 Identities=11% Similarity=0.046 Sum_probs=46.3
Q ss_pred cCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCC------cccHHHH-hhcCccCceEE
Q psy3889 37 KFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGE------RDNEDLA-KRGCLTPQLLW 101 (243)
Q Consensus 37 ~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~------~~n~~l~-~~~~V~~PTi~ 101 (243)
.+++|||.||+ +||++| |.+.++.+.+.. .++.|..|++++++. ....+++ +++++.||.+.
T Consensus 47 ~Gk~vll~F~a--twC~~C~~~~~~l~~l~~~~~~-~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~p~l~ 119 (190)
T 2vup_A 47 KGSPLLIYNVA--SKCGYTKGGYETATTLYNKYKS-QGFTVLAFPCNQFGGQEPGNEEEIKEFVCTKFKAEFPIMA 119 (190)
T ss_dssp TTSCEEEEEEC--SSSTTHHHHHHHHHHHHHHHGG-GTCEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBC
T ss_pred CCCEEEEEEec--CCCCccHHHHHHHHHHHHHHhc-CCeEEEEEEcCccCCCCCCCHHHHHHHHHHhcCCCeEEEe
Confidence 57899999999 999999 899999998864 369999999863211 1224566 67777777553
No 190
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=98.02 E-value=1.6e-05 Score=71.18 Aligned_cols=86 Identities=14% Similarity=0.055 Sum_probs=70.4
Q ss_pred CCCceEcC-hhhHHHHhc-cCCeEEEEEEecCCCCCCc-HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhcCcc
Q psy3889 20 SKGHVSLD-THNFDKILS-KFHTTLVKFDIAYPYGAKH-EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRGCLT 96 (243)
Q Consensus 20 ~~~v~~L~-~~nF~~~v~-~~k~vlV~FyA~~pWC~~c-p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~~V~ 96 (243)
...+..++ .++|++.+. ..+.++|.||+ +||..+ +.|.++|..+.+ ++.|+.++ +.+++++|+|+
T Consensus 122 ~~~~~~l~~~~~~~~~~~~~~~~~vv~ff~--~~~~~~~~~~~~~A~~~~~--~~~f~~~~--------~~~~~~~~~v~ 189 (350)
T 1sji_A 122 EDPVEIINSKLEVQAFERIEDQIKLIGFFK--SEESEYYKAFEEAAEHFQP--YIKFFATF--------DKGVAKKLSLK 189 (350)
T ss_dssp SCSEEECCSHHHHHHHHHCCSSCEEEEECS--CTTSHHHHHHHHHHHHTTT--TSEEEEEC--------CHHHHHHHTCC
T ss_pred CCcceeccchHHHHHHhccCCCcEEEEEEC--CCCcHHHHHHHHHHHhhcc--CcEEEEEC--------CHHHHHHcCCC
Confidence 35678884 689999987 77789999999 999876 999999999854 78888873 46799999999
Q ss_pred CceEEEec--------------cchHhhhhhhHHHHhhhhc
Q psy3889 97 PQLLWAFC--------------VADSLNKTLFILIIFFSSI 123 (243)
Q Consensus 97 ~PTi~lF~--------------~~~~l~~~~f~~~~i~~~~ 123 (243)
+||+.+|+ +.++|.+ | ++.++
T Consensus 190 ~p~i~~~~~~~~~~~~y~g~~~~~~~l~~--f----i~~~~ 224 (350)
T 1sji_A 190 MNEVDFYEPFMDEPIAIPDKPYTEEELVE--F----VKEHQ 224 (350)
T ss_dssp TTCEEEECTTCSSCEECSSSSCCHHHHHH--H----HHHHC
T ss_pred CCcEEEEeCCCCCceecCCCCCCHHHHHH--H----HHHcC
Confidence 99999997 3567888 8 66554
No 191
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=98.01 E-value=8.7e-06 Score=68.95 Aligned_cols=61 Identities=15% Similarity=0.030 Sum_probs=47.3
Q ss_pred cCCeEEEEEEecCCCCCCc---HHHHHHHHHccCCCCcEEEEEecccCCCc------ccHHHHh------hcCccCceE
Q psy3889 37 KFHTTLVKFDIAYPYGAKH---EAFLEVAESSKHQPDFLVAEVGVKDYGER------DNEDLAK------RGCLTPQLL 100 (243)
Q Consensus 37 ~~k~vlV~FyA~~pWC~~c---p~~~~lA~~~~~~~~v~vakVd~~d~~~~------~n~~l~~------~~~V~~PTi 100 (243)
.+++|||.||| +||++| |.+.++.+.|+. .++.|.-|+|++++.. +-.++++ +|++.||.+
T Consensus 55 ~GKvvll~FwA--t~C~~c~e~p~L~~l~~~~~~-~g~~Vlgvs~d~f~~~e~~~~~~i~~f~~~~~~~~~~~~~fpll 130 (215)
T 2i3y_A 55 VGKHILFVNVA--TYCGLTAQYPELNALQEELKP-YGLVVLGFPCNQFGKQEPGDNKEILPGLKYVRPGGGFVPSFQLF 130 (215)
T ss_dssp TTSEEEEEEEC--SSSGGGGGHHHHHHHHHHHGG-GTEEEEEEECCCSTTCCCSCHHHHHHHHHHTSSCTTCCCSSEEB
T ss_pred CCCEEEEEEeC--CCCCChHhHHHHHHHHHHhcc-CCeEEEEEEccccCcCCCCCHHHHHHHHHhccchhccCccceeE
Confidence 57899999999 999999 888888888863 4699999998754321 1255677 888889854
No 192
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=97.98 E-value=4.6e-06 Score=65.59 Aligned_cols=57 Identities=11% Similarity=0.073 Sum_probs=40.2
Q ss_pred cCC-eEEEEEE-ecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhcCccCc
Q psy3889 37 KFH-TTLVKFD-IAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRGCLTPQ 98 (243)
Q Consensus 37 ~~k-~vlV~Fy-A~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~~V~~P 98 (243)
.++ +++|.|| + +||++| |.+.++.+.+. ..++.+..|++++ ......+++++++.||
T Consensus 34 ~gk~~vvl~F~~a--~~C~~C~~~~~~l~~~~~~~~-~~~~~vv~is~d~--~~~~~~~~~~~~~~~~ 96 (160)
T 1xvw_A 34 RGAKNVLLVFFPL--AFTGICQGELDQLRDHLPEFE-NDDSAALAISVGP--PPTHKIWATQSGFTFP 96 (160)
T ss_dssp TTTCEEEEEECSC--TTSSHHHHHHHHHHHTGGGTS-SSSEEEEEEESCC--HHHHHHHHHHHTCCSC
T ss_pred cCCCCEEEEEECC--CCCCchHHHHHHHHHHHHHHH-HCCcEEEEEeCCC--HHHHHHHHHhcCCCce
Confidence 455 9999998 9 999999 78888877775 3479999998852 1123445555555555
No 193
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=97.97 E-value=1.1e-05 Score=65.54 Aligned_cols=40 Identities=18% Similarity=0.049 Sum_probs=34.5
Q ss_pred cCCeEEEEEE-ecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecc
Q psy3889 37 KFHTTLVKFD-IAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVK 79 (243)
Q Consensus 37 ~~k~vlV~Fy-A~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~ 79 (243)
.+++++|.|| + +||++| |.+.++.+.+.. .++.+..|+++
T Consensus 30 ~gk~vvl~F~~a--~~C~~C~~~~~~l~~~~~~~~~-~~v~vv~vs~d 74 (187)
T 1we0_A 30 KGKWSIVVFYPA--DFSFVCPTELEDVQKEYAELKK-LGVEVYSVSTD 74 (187)
T ss_dssp SSSEEEEEECSC--TTCSSCTHHHHHHHHHHHHHHH-TTEEEEEEESS
T ss_pred CCCCEEEEEECC--CCCcchHHHHHHHHHHHHHHHH-cCCEEEEEECC
Confidence 4689999999 9 999999 889999988853 36889999886
No 194
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=97.97 E-value=1.5e-05 Score=58.80 Aligned_cols=67 Identities=9% Similarity=-0.023 Sum_probs=40.8
Q ss_pred hhHHHHhccCCeEEEEEEecCCCCCCcHHHHHHHHHccC-CCCcEEEEEecccCCC--cccHHHHhhcCcc-CceEE
Q psy3889 29 HNFDKILSKFHTTLVKFDIAYPYGAKHEAFLEVAESSKH-QPDFLVAEVGVKDYGE--RDNEDLAKRGCLT-PQLLW 101 (243)
Q Consensus 29 ~nF~~~v~~~k~vlV~FyA~~pWC~~cp~~~~lA~~~~~-~~~v~vakVd~~d~~~--~~n~~l~~~~~V~-~PTi~ 101 (243)
+.+++.+.+.+ ++.|++ |||++|.....+-+...- .++ +..+|++..++ .....+++.+++. +||++
T Consensus 3 ~~~~~~i~~~~--v~~f~~--~~C~~C~~~~~~L~~~~~~~~~--~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~i~ 73 (105)
T 1kte_A 3 AFVNSKIQPGK--VVVFIK--PTCPFCRKTQELLSQLPFKEGL--LEFVDITATSDTNEIQDYLQQLTGARTVPRVF 73 (105)
T ss_dssp HHHHHHCCTTC--EEEEEC--SSCHHHHHHHHHHHHSCBCTTS--EEEEEGGGSTTHHHHHHHHHHHHSCCCSCEEE
T ss_pred hHHHhhcccCC--EEEEEc--CCCHhHHHHHHHHHHcCCCCCc--cEEEEccCCCCHHHHHHHHHHHhCCCCcCeEE
Confidence 45777775543 566999 999999544444444321 122 55567752100 0114688899999 99983
No 195
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=97.95 E-value=1e-05 Score=66.41 Aligned_cols=40 Identities=15% Similarity=0.080 Sum_probs=34.5
Q ss_pred cCCeEEEEEE-ecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecc
Q psy3889 37 KFHTTLVKFD-IAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVK 79 (243)
Q Consensus 37 ~~k~vlV~Fy-A~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~ 79 (243)
.+++++|.|| + +||++| |.+.++.+.+.. .++.|..|+++
T Consensus 32 ~gk~vvl~F~~a--~~C~~C~~~~~~l~~l~~~~~~-~~v~vv~Is~d 76 (198)
T 1zof_A 32 GKNGVILFFWPK--DFTFVCPTEIIAFDKRVKDFHE-KGFNVIGVSID 76 (198)
T ss_dssp CSSEEEEEECSC--TTCSSCCTHHHHHHHTHHHHHH-TTEEEEEEESS
T ss_pred CCCcEEEEEECC--CCCCchHHHHHHHHHHHHHHHH-cCCEEEEEECC
Confidence 5689999999 9 999999 899999988853 46889999886
No 196
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=97.94 E-value=2.3e-05 Score=70.97 Aligned_cols=86 Identities=13% Similarity=0.084 Sum_probs=71.1
Q ss_pred CCCceEcC-hhhHHHHhc-cCCeEEEEEEecCCCCCCc-HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhcCcc
Q psy3889 20 SKGHVSLD-THNFDKILS-KFHTTLVKFDIAYPYGAKH-EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRGCLT 96 (243)
Q Consensus 20 ~~~v~~L~-~~nF~~~v~-~~k~vlV~FyA~~pWC~~c-p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~~V~ 96 (243)
...+..++ .++|++.+. ..+.++|.||+ +||+.. +.|.++|..+.+ ++.|+.++ +.+++++|+|+
T Consensus 124 ~~~v~~i~~~~~~~~~~~~~~~~~vv~ff~--~~~~~~~~~f~~~A~~~~~--~~~F~~~~--------~~~~~~~~~v~ 191 (367)
T 3us3_A 124 EDPVELIEGERELQAFENIEDEIKLIGYFK--NKDSEHYKAFKEAAEEFHP--YIPFFATF--------DSKVAKKLTLK 191 (367)
T ss_dssp SCSEEECCSHHHHHHHHHCCSSCEEEEECS--CTTCHHHHHHHHHHHHHTT--TSCEEEEC--------CHHHHHHHTCC
T ss_pred CCCcEEcCCHHHHHHHhccCCCcEEEEEEC--CCCchHHHHHHHHHHhhcC--CcEEEEEC--------CHHHHHHcCCC
Confidence 35677885 689999997 67899999999 999876 999999999954 68888874 46799999999
Q ss_pred CceEEEec--------------cchHhhhhhhHHHHhhhhc
Q psy3889 97 PQLLWAFC--------------VADSLNKTLFILIIFFSSI 123 (243)
Q Consensus 97 ~PTi~lF~--------------~~~~l~~~~f~~~~i~~~~ 123 (243)
.|||++|+ +.++|.+ | |+.++
T Consensus 192 ~p~i~lf~~~~~~~~~y~g~~~~~~~l~~--f----i~~~~ 226 (367)
T 3us3_A 192 LNEIDFYEAFMEEPVTIPDKPNSEEEIVN--F----VEEHR 226 (367)
T ss_dssp TTCEEEECTTCSSCEECSSSSCCHHHHHH--H----HHHTC
T ss_pred CCeEEEEcCCCCCCeecCCCCCCHHHHHH--H----HHHcC
Confidence 99999997 3567888 8 77664
No 197
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=97.93 E-value=1e-05 Score=68.00 Aligned_cols=61 Identities=13% Similarity=0.054 Sum_probs=46.8
Q ss_pred cCCeEEEEEEecCCCCCCc---HHHHHHHHHccCCCCcEEEEEecccCCCc------ccHHHHh------hcCccCceE
Q psy3889 37 KFHTTLVKFDIAYPYGAKH---EAFLEVAESSKHQPDFLVAEVGVKDYGER------DNEDLAK------RGCLTPQLL 100 (243)
Q Consensus 37 ~~k~vlV~FyA~~pWC~~c---p~~~~lA~~~~~~~~v~vakVd~~d~~~~------~n~~l~~------~~~V~~PTi 100 (243)
.+++|||.||| +||++| |.+.++.+.|+. .++.|.-|++++++.. ...++++ +|++.||.+
T Consensus 37 kGKvvll~F~A--t~C~~c~e~p~L~~l~~~~~~-~g~~vlgvs~d~f~~~e~~~~~~i~~f~~~~~~~~~~~~~fp~l 112 (207)
T 2r37_A 37 AGKYVLFVNVA--SYGGLTGQYIELNALQEELAP-FGLVILGFPCNQFGKQEPGENSEILPTLKYVRPGGGFVPNFQLF 112 (207)
T ss_dssp TTSEEEEEEEC--SSSTTTTHHHHHHHHHHHHGG-GTEEEEEEECCCBTTCCCSCHHHHHHHHHHTSSCTTCCCSSEEB
T ss_pred CCCEEEEEEeC--CCCCChHHHHHHHHHHHHhcc-CCEEEEEEECcccCcCCCCCHHHHHHHHHhcchhhccCccceee
Confidence 57899999999 999999 788888888853 4699999998644211 2255677 888888855
No 198
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=97.92 E-value=1.1e-05 Score=67.78 Aligned_cols=25 Identities=8% Similarity=-0.025 Sum_probs=20.6
Q ss_pred cCCeEEEEEEecCCCCCCc----HHHHHHHH
Q psy3889 37 KFHTTLVKFDIAYPYGAKH----EAFLEVAE 63 (243)
Q Consensus 37 ~~k~vlV~FyA~~pWC~~c----p~~~~lA~ 63 (243)
+++++++.||+ |||++| |.++++++
T Consensus 85 ~~k~~vv~F~d--~~Cp~C~~~~~~l~~l~~ 113 (216)
T 1eej_A 85 QEKHVITVFTD--ITCGYCHKLHEQMADYNA 113 (216)
T ss_dssp TCCEEEEEEEC--TTCHHHHHHHTTHHHHHH
T ss_pred CCCEEEEEEEC--CCCHHHHHHHHHHHHHHh
Confidence 46789999999 999999 66666654
No 199
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=97.92 E-value=1.6e-05 Score=65.24 Aligned_cols=40 Identities=15% Similarity=0.092 Sum_probs=34.5
Q ss_pred cCCeEEEEEE-ecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecc
Q psy3889 37 KFHTTLVKFD-IAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVK 79 (243)
Q Consensus 37 ~~k~vlV~Fy-A~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~ 79 (243)
.+++++|.|| + +||++| |.+.++.+.+.. .++.|..|+++
T Consensus 44 ~gk~vvl~F~~a--~~C~~C~~~~~~l~~l~~~~~~-~~v~vv~Vs~d 88 (195)
T 2bmx_A 44 PGKWRVVFFWPK--DFTFVCPTEIAAFSKLNDEFED-RDAQILGVSID 88 (195)
T ss_dssp TTCEEEEEECSC--TTSCCCHHHHHHHHHTHHHHHT-TTEEEEEEESS
T ss_pred CCCcEEEEEEcC--CCCCCcHHHHHHHHHHHHHHHH-CCCEEEEEECC
Confidence 4689999999 9 999999 888888888853 47999999886
No 200
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=97.90 E-value=8.1e-06 Score=64.78 Aligned_cols=58 Identities=17% Similarity=0.068 Sum_probs=42.1
Q ss_pred cCCe-EEEEEE-ecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhcCccCce
Q psy3889 37 KFHT-TLVKFD-IAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRGCLTPQL 99 (243)
Q Consensus 37 ~~k~-vlV~Fy-A~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~~V~~PT 99 (243)
.++. ++|.|| + +||++| |.+.++.+.++. .++.|..|++|+ ......+++++++.||.
T Consensus 27 ~gk~~vvl~F~~a--~~C~~C~~~~~~l~~~~~~~~~-~~v~vv~vs~d~--~~~~~~~~~~~~~~~~~ 90 (161)
T 3drn_A 27 IGKHNIVLYFYPK--DDTPGSTREASAFRDNWDLLKD-YDVVVIGVSSDD--INSHKRFKEKYKLPFIL 90 (161)
T ss_dssp TTTSEEEEEECSC--TTCHHHHHHHHHHHHTHHHHHT-TCEEEEEEESCC--HHHHHHHHHHTTCCSEE
T ss_pred cCCCCEEEEEEcC--CCCCchHHHHHHHHHHHHHHHH-cCCEEEEEeCCC--HHHHHHHHHHhCCCceE
Confidence 4565 999999 9 999999 889999988863 468899998852 22335555555555553
No 201
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=97.86 E-value=1.2e-05 Score=63.94 Aligned_cols=58 Identities=14% Similarity=-0.002 Sum_probs=45.4
Q ss_pred cCCeEEEEEEecCCC-CCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhcCcc-CceEE
Q psy3889 37 KFHTTLVKFDIAYPY-GAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRGCLT-PQLLW 101 (243)
Q Consensus 37 ~~k~vlV~FyA~~pW-C~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~~V~-~PTi~ 101 (243)
.+++++|.||+ +| |++| |.+.++.+.+ +++.+..|++|+ .....++++++++. ||.+.
T Consensus 43 ~gk~~vl~F~~--~~~C~~C~~~~~~l~~l~~~~---~~~~vv~is~d~--~~~~~~~~~~~~~~~~~~~~ 106 (167)
T 2jsy_A 43 KGKVTIISVIP--SIDTGVCDAQTRRFNEEAAKL---GDVNVYTISADL--PFAQARWCGANGIDKVETLS 106 (167)
T ss_dssp TTSCEEEEECS--CSTTSHHHHTHHHHHHHHHHH---SSCEEEEEECSS--GGGTSCCGGGSSCTTEEEEE
T ss_pred CCCeEEEEEec--CCCCCchHHHHHHHHHHHHHc---CCCEEEEEECCC--HHHHHHHHHhcCCCCceEee
Confidence 46799999999 99 9999 8999999888 478899998862 22345677777885 77654
No 202
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.84 E-value=1.6e-05 Score=61.83 Aligned_cols=67 Identities=7% Similarity=0.001 Sum_probs=41.1
Q ss_pred ChhhHHHHhccCCeEEEEEEecCCCCCCcHHHHHHHHHccCCCCcEEEEEecccCCC-cc-cHHHHhhcCcc-CceEE
Q psy3889 27 DTHNFDKILSKFHTTLVKFDIAYPYGAKHEAFLEVAESSKHQPDFLVAEVGVKDYGE-RD-NEDLAKRGCLT-PQLLW 101 (243)
Q Consensus 27 ~~~nF~~~v~~~k~vlV~FyA~~pWC~~cp~~~~lA~~~~~~~~v~vakVd~~d~~~-~~-n~~l~~~~~V~-~PTi~ 101 (243)
....|++++...+ ++| |++ |||++|.....+-+... +.+..+|++...+ .+ ..++++.+++. +||++
T Consensus 16 ~~~~~~~~i~~~~-vvv-f~~--~~Cp~C~~~~~~L~~~~----i~~~~vdid~~~~~~~~~~~l~~~~g~~~vP~l~ 85 (130)
T 2cq9_A 16 PVNQIQETISDNC-VVI-FSK--TSCSYCTMAKKLFHDMN----VNYKVVELDLLEYGNQFQDALYKMTGERTVPRIF 85 (130)
T ss_dssp HHHHHHHHHHHSS-EEE-EEC--SSCSHHHHHHHHHHHHT----CCCEEEETTTSTTHHHHHHHHHHHHSSCCSSEEE
T ss_pred HHHHHHHHHcCCc-EEE-EEc--CCChHHHHHHHHHHHcC----CCcEEEECcCCcCcHHHHHHHHHHhCCCCcCEEE
Confidence 3566777776554 333 999 99999954444444432 3345677752100 00 12488999999 99984
No 203
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=97.81 E-value=3e-05 Score=61.46 Aligned_cols=66 Identities=12% Similarity=0.003 Sum_probs=47.9
Q ss_pred cCCeEEEEEEecCCCCC-Cc----HHHHHHHHHccCCC-CcEEEEEecccC--CCcccHHHHhhcCccCceEEEec
Q psy3889 37 KFHTTLVKFDIAYPYGA-KH----EAFLEVAESSKHQP-DFLVAEVGVKDY--GERDNEDLAKRGCLTPQLLWAFC 104 (243)
Q Consensus 37 ~~k~vlV~FyA~~pWC~-~c----p~~~~lA~~~~~~~-~v~vakVd~~d~--~~~~n~~l~~~~~V~~PTi~lF~ 104 (243)
.+++++|.||+ +||+ +| |.+.++.+.+.... ++.|..|+++.. .......+++++++.||...+..
T Consensus 32 ~gk~vll~f~~--~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~d~~~~~~~~~~~~~~~~~~~~~l~ 105 (174)
T 1xzo_A 32 KGEVWLADFIF--TNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVDPENDKPKQLKKFAANYPLSFDNWDFLT 105 (174)
T ss_dssp TTCCEEEEEEC--SCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCHHHHHHHHTTSCCCGGGEEEEB
T ss_pred CCCEEEEEEEc--CCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCCcceEEEe
Confidence 57899999999 9999 99 88999988885332 599999998521 11123667788887776544443
No 204
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=97.81 E-value=2.8e-05 Score=54.43 Aligned_cols=49 Identities=10% Similarity=0.072 Sum_probs=33.8
Q ss_pred EEEEEecCCCCCCcHHHHHHHHHccCCCCcEEEEEecccCCCcccHHHH---hhcCcc-CceEE
Q psy3889 42 LVKFDIAYPYGAKHEAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLA---KRGCLT-PQLLW 101 (243)
Q Consensus 42 lV~FyA~~pWC~~cp~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~---~~~~V~-~PTi~ 101 (243)
++.|++ |||++|.....+-+.. ++.+..+|++ .++++. .++++. +||+.
T Consensus 3 v~~f~~--~~C~~C~~~~~~l~~~----~i~~~~vdi~-----~~~~~~~~~~~~g~~~vP~~~ 55 (81)
T 1h75_A 3 ITIYTR--NDCVQCHATKRAMENR----GFDFEMINVD-----RVPEAAEALRAQGFRQLPVVI 55 (81)
T ss_dssp EEEEEC--TTCHHHHHHHHHHHHT----TCCCEEEETT-----TCHHHHHHHHHTTCCSSCEEE
T ss_pred EEEEcC--CCChhHHHHHHHHHHC----CCCeEEEECC-----CCHHHHHHHHHhCCCccCEEE
Confidence 567999 9999995444444433 3567788886 344333 358999 99993
No 205
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=97.81 E-value=2.3e-05 Score=62.81 Aligned_cols=36 Identities=8% Similarity=-0.051 Sum_probs=26.8
Q ss_pred cCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEe
Q psy3889 37 KFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVG 77 (243)
Q Consensus 37 ~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd 77 (243)
..+.+++.|+. +||+|| |.+.++.+.+. ++.+.-++
T Consensus 21 ~a~v~i~~f~d--~~Cp~C~~~~~~l~~l~~~~~---~v~~~~~~ 60 (175)
T 3gyk_A 21 EGDVTVVEFFD--YNCPYCRRAMAEVQGLVDADP---NVRLVYRE 60 (175)
T ss_dssp TCSEEEEEEEC--TTCHHHHHHHHHHHHHHHHCT---TEEEEEEE
T ss_pred CCCEEEEEEEC--CCCccHHHHHHHHHHHHHhCC---CEEEEEEe
Confidence 46789999999 999999 77777776642 45555444
No 206
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=97.80 E-value=2.7e-05 Score=63.53 Aligned_cols=40 Identities=15% Similarity=0.079 Sum_probs=34.2
Q ss_pred cCCeEEEEEE-ecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecc
Q psy3889 37 KFHTTLVKFD-IAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVK 79 (243)
Q Consensus 37 ~~k~vlV~Fy-A~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~ 79 (243)
.+++++|.|| + +||++| |.+.++.+.+.. .++.|..|+++
T Consensus 30 ~gk~vvl~F~~a--~~C~~C~~~~~~l~~~~~~~~~-~~v~vv~Is~d 74 (192)
T 2h01_A 30 GKKYVLLYFYPL--DFTFVCPSEIIALDKALDSFKE-RNVELLGCSVD 74 (192)
T ss_dssp TTCEEEEEECSC--SSCSSCCHHHHHHHHTHHHHHH-TTEEEEEEESS
T ss_pred CCCeEEEEEECC--CCCCCCHHHHHHHHHHHHHHHH-CCCEEEEEEeC
Confidence 5689999999 9 999999 888888888853 47889999885
No 207
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=97.73 E-value=3.8e-05 Score=61.17 Aligned_cols=66 Identities=8% Similarity=0.004 Sum_probs=41.4
Q ss_pred hhhHHHHhccCCeEEEEEEecCCCCCCcHHHHHHHHHccCCCCcEEEEEecccCCC-cc-cHHHHhhcCcc-CceEE
Q psy3889 28 THNFDKILSKFHTTLVKFDIAYPYGAKHEAFLEVAESSKHQPDFLVAEVGVKDYGE-RD-NEDLAKRGCLT-PQLLW 101 (243)
Q Consensus 28 ~~nF~~~v~~~k~vlV~FyA~~pWC~~cp~~~~lA~~~~~~~~v~vakVd~~d~~~-~~-n~~l~~~~~V~-~PTi~ 101 (243)
...|++.+.+.+ |+| |++ |||++|.....+-+... +.+..+|++...+ .+ ..++++++++. +||++
T Consensus 39 ~~~~~~~i~~~~-Vvv-f~~--~~Cp~C~~~k~~L~~~~----i~~~~vdId~~~~~~~~~~~L~~~~g~~tvP~if 107 (146)
T 2ht9_A 39 VNQIQETISDNC-VVI-FSK--TSCSYCTMAKKLFHDMN----VNYKVVELDLLEYGNQFQDALYKMTGERTVPRIF 107 (146)
T ss_dssp HHHHHHHHHHCS-EEE-EEC--TTCHHHHHHHHHHHHHT----CCCEEEEGGGCTTHHHHHHHHHHHHSCCCSCEEE
T ss_pred HHHHHHHhcCCC-EEE-EEC--CCChhHHHHHHHHHHcC----CCeEEEECccCcCCHHHHHHHHHHhCCCCcCeEE
Confidence 567888886553 434 999 99999954444444432 3345677752100 01 13588999999 99984
No 208
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=97.71 E-value=2.9e-05 Score=63.70 Aligned_cols=40 Identities=23% Similarity=0.138 Sum_probs=34.4
Q ss_pred cCCeEEEEEE-ecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecc
Q psy3889 37 KFHTTLVKFD-IAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVK 79 (243)
Q Consensus 37 ~~k~vlV~Fy-A~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~ 79 (243)
.+++++|.|| + +||++| |.+.++.+.++. .++.|..|+++
T Consensus 33 ~gk~vvl~F~~a--~~C~~C~~~~~~l~~l~~~~~~-~~v~vv~Is~d 77 (197)
T 1qmv_A 33 KGKYVVLFFYPL--DFTFVAPTEIIAFSNRAEDFRK-LGCEVLGVSVD 77 (197)
T ss_dssp TTSEEEEEECSC--TTSSHHHHHHHHHHHTHHHHHT-TTEEEEEEESS
T ss_pred CCCeEEEEEECC--CCCCCCHHHHHHHHHHHHHHHH-CCCEEEEEECC
Confidence 5689999999 9 999999 788888888853 47999999986
No 209
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=97.71 E-value=6.3e-06 Score=66.39 Aligned_cols=66 Identities=14% Similarity=0.159 Sum_probs=49.6
Q ss_pred hHHHHhccCCeEEEEEE-ecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhcCccCceE
Q psy3889 30 NFDKILSKFHTTLVKFD-IAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRGCLTPQLL 100 (243)
Q Consensus 30 nF~~~v~~~k~vlV~Fy-A~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~~V~~PTi 100 (243)
++.+...+++++++.|| + .||++| |.|.++.+.|+ ..++.+.-|+.|+ ....+.++++++++||.+
T Consensus 25 ~Lsd~~~~Gk~vvl~f~~~--~~cp~C~~e~~~l~~~~~~~~-~~~v~vv~is~d~--~~~~~~~~~~~~~~fp~l 95 (164)
T 4gqc_A 25 NLYEVLKRGRPAVLIFFPA--AFSPVCTKELCTFRDKMAQLE-KANAEVLAISVDS--PWCLKKFKDENRLAFNLL 95 (164)
T ss_dssp EHHHHHHTSSCEEEEECSC--TTCCEECSSCEESCCCGGGGG-GSSSEEEEEESSC--HHHHHHHHHHTTCCSEEE
T ss_pred EHHHHhcCCCEEEEEEeCC--CCCCCcccchhhhhhhHHHhh-ccCceEEEecCCC--HHHHHHHHHhcCccccee
Confidence 44455567889999998 8 999999 78888888885 3468888888752 223577888888888854
No 210
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=97.70 E-value=3.6e-05 Score=58.83 Aligned_cols=68 Identities=13% Similarity=0.062 Sum_probs=45.9
Q ss_pred hhhHHHHhccCCeEEEEEEecCCCCCCcHHH-HHHHHHccCCCCcEEEEEecccCCC--cccHHHHhhcCcc-CceE
Q psy3889 28 THNFDKILSKFHTTLVKFDIAYPYGAKHEAF-LEVAESSKHQPDFLVAEVGVKDYGE--RDNEDLAKRGCLT-PQLL 100 (243)
Q Consensus 28 ~~nF~~~v~~~k~vlV~FyA~~pWC~~cp~~-~~lA~~~~~~~~v~vakVd~~d~~~--~~n~~l~~~~~V~-~PTi 100 (243)
...+++.+...+ ++.|++ |||++|... ..+-+... .+++.+..+|++...+ ....++.+++++. +|++
T Consensus 15 ~~~~~~~i~~~~--Vvvf~~--~~Cp~C~~alk~~L~~~~-~~~i~~~~vdid~~~~~~~~~~~l~~~~g~~tvP~v 86 (118)
T 3c1r_A 15 IKHVKDLIAENE--IFVASK--TYCPYCHAALNTLFEKLK-VPRSKVLVLQLNDMKEGADIQAALYEINGQRTVPNI 86 (118)
T ss_dssp HHHHHHHHHHSS--EEEEEC--SSCHHHHHHHHHHHTTSC-CCGGGEEEEEGGGSTTHHHHHHHHHHHHSCCSSCEE
T ss_pred HHHHHHHHccCc--EEEEEc--CCCcCHHHHHHHHHHHcC-CCCCCeEEEECccCCChHHHHHHHHHHhCCCCcCEE
Confidence 456666775544 445999 999999776 66655543 2347888999862110 0124688999999 9997
No 211
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=97.70 E-value=3.3e-05 Score=60.93 Aligned_cols=64 Identities=13% Similarity=0.091 Sum_probs=42.6
Q ss_pred HHHHhccCCeEEEEEE-ecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhcCccCceE
Q psy3889 31 FDKILSKFHTTLVKFD-IAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRGCLTPQLL 100 (243)
Q Consensus 31 F~~~v~~~k~vlV~Fy-A~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~~V~~PTi 100 (243)
+.+...++++++|.|| + .||++| |.+.++.+.++.. . .|.-|++|+ .....+++++++++||.+
T Consensus 28 l~~~~gk~~~vvl~f~~~--~~c~~C~~~~~~l~~~~~~~~~~-~-~vv~is~d~--~~~~~~~~~~~~~~~~~l 96 (159)
T 2a4v_A 28 LKKITENNRVVVFFVYPR--ASTPGSTRQASGFRDNYQELKEY-A-AVFGLSADS--VTSQKKFQSKQNLPYHLL 96 (159)
T ss_dssp HHHHHHHCSEEEEEECSS--SSSHHHHHHHHHHHHHHHHHTTT-C-EEEEEESCC--HHHHHHHHHHHTCSSEEE
T ss_pred HHHHhCCCCeEEEEEcCC--CCCCCHHHHHHHHHHHHHHHHhC-C-cEEEEeCCC--HHHHHHHHHHhCCCceEE
Confidence 3344444458999987 8 999999 8899998888643 3 677777752 112355666666666644
No 212
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=97.69 E-value=0.00011 Score=59.17 Aligned_cols=37 Identities=16% Similarity=0.033 Sum_probs=31.0
Q ss_pred cCCeEEEEEEecCCC-CCCc----HHHHHHHHHccCCCCcEEEEEecc
Q psy3889 37 KFHTTLVKFDIAYPY-GAKH----EAFLEVAESSKHQPDFLVAEVGVK 79 (243)
Q Consensus 37 ~~k~vlV~FyA~~pW-C~~c----p~~~~lA~~~~~~~~v~vakVd~~ 79 (243)
.+++++|.||+ +| |++| |.+.++.+. +++.|..|++|
T Consensus 43 ~gk~vvl~F~~--t~~C~~C~~~~~~l~~l~~~----~~v~vv~Is~D 84 (175)
T 1xvq_A 43 RGKSVLLNIFP--SVDTPVCATSVRTFDERAAA----SGATVLCVSKD 84 (175)
T ss_dssp TTSCEEEEECS--CCCSSCCCHHHHHHHHHHHH----TTCEEEEEESS
T ss_pred CCCEEEEEEEe--CCCCchHHHHHHHHHHHHhh----cCCEEEEEECC
Confidence 46899999999 99 9999 788888776 47888888875
No 213
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=97.69 E-value=0.00012 Score=60.29 Aligned_cols=41 Identities=2% Similarity=-0.104 Sum_probs=33.5
Q ss_pred cCCeEEEEEEecCCCCCC-c----HHHHHHHHHccC--CCCcEEEEEecc
Q psy3889 37 KFHTTLVKFDIAYPYGAK-H----EAFLEVAESSKH--QPDFLVAEVGVK 79 (243)
Q Consensus 37 ~~k~vlV~FyA~~pWC~~-c----p~~~~lA~~~~~--~~~v~vakVd~~ 79 (243)
.++++||.||+ +||++ | |.+.++.+.+.. ..++.|..|++|
T Consensus 40 ~Gk~vlv~F~a--t~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~Is~D 87 (200)
T 2b7k_A 40 LGKFSIIYFGF--SNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITCD 87 (200)
T ss_dssp TTSCEEEEEEC--TTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEEESC
T ss_pred CCCEEEEEEEC--CCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEEECC
Confidence 56899999999 99998 9 788887777742 247888888885
No 214
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=97.68 E-value=7.4e-06 Score=68.41 Aligned_cols=47 Identities=9% Similarity=0.077 Sum_probs=36.7
Q ss_pred hhHHHHh--ccCCeEEEEEEecCCCCCCc----HHH---HHHHHHccCCCCcEEEEEecc
Q psy3889 29 HNFDKIL--SKFHTTLVKFDIAYPYGAKH----EAF---LEVAESSKHQPDFLVAEVGVK 79 (243)
Q Consensus 29 ~nF~~~v--~~~k~vlV~FyA~~pWC~~c----p~~---~~lA~~~~~~~~v~vakVd~~ 79 (243)
.+|..+. .+.+++||+||+ +||||| |.+ +++++.+. ++|.|.+++++
T Consensus 102 ~~y~~l~~p~~~~~~vveFf~--~~C~~C~~~~p~~~~~~~l~~~~~--~~v~~~~~~v~ 157 (197)
T 1un2_A 102 KQYTTLEKPVAGAPQVLEFFS--FFCPHCYQFEEVLHISDNVKKKLP--EGVKMTKYHVN 157 (197)
T ss_dssp TTEEECSSCCTTCCSEEEEEC--TTCHHHHHHHHTSCHHHHHTTSSC--TTCCEEEEECS
T ss_pred CCceEccCCCCCCCEEEEEEC--CCChhHHHhCcccccHHHHHHHCC--CCCEEEEeccC
Confidence 4444433 246789999999 999999 777 88888774 37999999996
No 215
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=97.66 E-value=1.1e-05 Score=64.15 Aligned_cols=59 Identities=15% Similarity=0.163 Sum_probs=43.1
Q ss_pred cCCeEEEEEE-ecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhcCccCceE
Q psy3889 37 KFHTTLVKFD-IAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRGCLTPQLL 100 (243)
Q Consensus 37 ~~k~vlV~Fy-A~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~~V~~PTi 100 (243)
.++++++.|| + .||++| |.+.++.+.+. ..++.+.-|+.|+ ......++++++++||.+
T Consensus 29 ~Gk~vvl~f~~~--~~c~~C~~e~~~l~~~~~~~~-~~~~~~v~vs~d~--~~~~~~~~~~~~~~~p~l 92 (157)
T 4g2e_A 29 KGKVVVLAFYPA--AFTQVCTKEMCTFRDSMAKFN-QVNAVVLGISVDP--PFSNKAFKEHNKLNFTIL 92 (157)
T ss_dssp TTSCEEEEECSC--TTCCC------CCSCGGGGGG-GCSSEEEEEESSC--HHHHHHHHHHTTCCSEEE
T ss_pred CCCeEEEEecCC--CCCCccccchhhccccccccc-ccCceEeeecccc--hhHHHHHHHHcCCcEEEE
Confidence 5689999999 8 999999 67777777774 3568888888752 223467888888888854
No 216
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=97.65 E-value=4e-05 Score=61.12 Aligned_cols=57 Identities=5% Similarity=-0.033 Sum_probs=42.0
Q ss_pred cCCeEEEEEE-ecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhcCcc-CceE
Q psy3889 37 KFHTTLVKFD-IAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRGCLT-PQLL 100 (243)
Q Consensus 37 ~~k~vlV~Fy-A~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~~V~-~PTi 100 (243)
.+++++|.|| + .||++| |.+.++.+.+ .++.|.-|++|+ ......+++++++. ||.+
T Consensus 42 ~gk~vvl~f~~~--~~c~~C~~e~~~l~~~~~~~---~~v~vv~Is~d~--~~~~~~~~~~~~~~~~~~l 104 (165)
T 1q98_A 42 ASKRKVLNIFPS--IDTGVCATSVRKFNQQAAKL---SNTIVLCISADL--PFAQARFCGAEGIENAKTV 104 (165)
T ss_dssp TTSEEEEEECSC--SCSSCCCHHHHHHHHHHHHS---TTEEEEEEESSC--HHHHTTCTTTTTCTTEEEE
T ss_pred CCCeEEEEEECC--CCCCccHHHHHHHHHHHHHc---CCCEEEEEeCCC--HHHHHHHHHHcCCCceEEe
Confidence 4679999999 7 999999 8888888887 478888888851 11224456667774 7644
No 217
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=97.64 E-value=3.8e-05 Score=58.01 Aligned_cols=65 Identities=9% Similarity=0.030 Sum_probs=41.1
Q ss_pred hhHHHHhccCCeEEEEEEecCCCCCCcHHHHHHHHHccCCCCcE---EEEEecccCCC--cccHHHHhhcCcc-CceEE
Q psy3889 29 HNFDKILSKFHTTLVKFDIAYPYGAKHEAFLEVAESSKHQPDFL---VAEVGVKDYGE--RDNEDLAKRGCLT-PQLLW 101 (243)
Q Consensus 29 ~nF~~~v~~~k~vlV~FyA~~pWC~~cp~~~~lA~~~~~~~~v~---vakVd~~d~~~--~~n~~l~~~~~V~-~PTi~ 101 (243)
...++.+.+. .++.|++ |||++|.....+-+.. .+. +..+|++...+ ....++++++|+. +||++
T Consensus 10 ~~~~~~i~~~--~vv~f~~--~~Cp~C~~~~~~L~~~----~~~~~~~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~v~ 80 (114)
T 2hze_A 10 EFVQQRLANN--KVTIFVK--YTCPFCRNALDILNKF----SFKRGAYEIVDIKEFKPENELRDYFEQITGGKTVPRIF 80 (114)
T ss_dssp HHHHTTCCTT--CEEEEEC--TTCHHHHHHHHHHTTS----CBCTTSEEEEEGGGSSSHHHHHHHHHHHHSCCSSCEEE
T ss_pred HHHHHHhccC--CEEEEEe--CCChhHHHHHHHHHHc----CCCcCceEEEEccCCCChHHHHHHHHHHhCCCCcCEEE
Confidence 4445555443 4666999 9999995555444433 233 77788862110 1124789999999 99984
No 218
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=97.63 E-value=6.4e-05 Score=51.45 Aligned_cols=49 Identities=6% Similarity=0.070 Sum_probs=34.9
Q ss_pred EEEEEecCCCCCCcHHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHh---hcCcc-CceEE
Q psy3889 42 LVKFDIAYPYGAKHEAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAK---RGCLT-PQLLW 101 (243)
Q Consensus 42 lV~FyA~~pWC~~cp~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~---~~~V~-~PTi~ 101 (243)
++.|++ |||++|.....+.+.. ++.+..+|++ .++++.+ ++++. +||+.
T Consensus 3 i~~y~~--~~C~~C~~~~~~l~~~----~i~~~~~di~-----~~~~~~~~~~~~~~~~vP~l~ 55 (75)
T 1r7h_A 3 ITLYTK--PACVQCTATKKALDRA----GLAYNTVDIS-----LDDEARDYVMALGYVQAPVVE 55 (75)
T ss_dssp EEEEEC--TTCHHHHHHHHHHHHT----TCCCEEEETT-----TCHHHHHHHHHTTCBCCCEEE
T ss_pred EEEEeC--CCChHHHHHHHHHHHc----CCCcEEEECC-----CCHHHHHHHHHcCCCccCEEE
Confidence 567999 9999995544444443 3667788886 4444444 89999 99987
No 219
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=97.60 E-value=4.6e-05 Score=61.80 Aligned_cols=60 Identities=10% Similarity=0.012 Sum_probs=46.2
Q ss_pred cCCeEEEEEE-ecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhcCccCceEE
Q psy3889 37 KFHTTLVKFD-IAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRGCLTPQLLW 101 (243)
Q Consensus 37 ~~k~vlV~Fy-A~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~~V~~PTi~ 101 (243)
.+++++|.|| + .||+.| |.+.++.+.++. .++.|.-|.+|. ......++++++++||.+.
T Consensus 50 ~Gk~vvl~f~~~--~~c~~C~~el~~l~~l~~~~~~-~~~~vv~Vs~D~--~~~~~~~~~~~~~~f~~l~ 114 (179)
T 3ixr_A 50 TNQWLVLYFYPK--DNTPGSSTEGLEFNLLLPQFEQ-INATVLGVSRDS--VKSHDSFCAKQGFTFPLVS 114 (179)
T ss_dssp TTSEEEEEECSC--TTSHHHHHHHHHHHHHHHHHHT-TTEEEEEEESCC--HHHHHHHHHHHTCCSCEEE
T ss_pred CCCCEEEEEEcC--CCCCchHHHHHHHHHHHHHHHH-CCCEEEEEcCCC--HHHHHHHHHHcCCceEEEE
Confidence 4678999998 8 999999 888888888863 468888888852 2235778888888888554
No 220
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=97.58 E-value=5.9e-05 Score=62.15 Aligned_cols=40 Identities=10% Similarity=-0.006 Sum_probs=34.4
Q ss_pred cCCeEEEEEE-ecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecc
Q psy3889 37 KFHTTLVKFD-IAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVK 79 (243)
Q Consensus 37 ~~k~vlV~Fy-A~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~ 79 (243)
.+++++|.|| + +||++| |.+.++.+.++. .++.|..|++|
T Consensus 35 ~gk~vvl~F~~~--~~C~~C~~~~~~l~~l~~~~~~-~~v~vi~Is~D 79 (202)
T 1uul_A 35 KGKWLVLFFYPM--DFTFVCPTEICQFSDRVKEFSD-IGCEVLACSMD 79 (202)
T ss_dssp TTSEEEEEECSC--TTCSHHHHHHHHHHHTHHHHHT-TTEEEEEEESS
T ss_pred CCCeEEEEEECC--CCCCcCHHHHHHHHHHHHHHHH-CCCEEEEEeCC
Confidence 4689999999 9 999999 888888888853 57999999986
No 221
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=97.53 E-value=4.7e-05 Score=60.88 Aligned_cols=58 Identities=9% Similarity=-0.080 Sum_probs=43.8
Q ss_pred cCCeEEEEEE-ecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhcCcc-CceEE
Q psy3889 37 KFHTTLVKFD-IAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRGCLT-PQLLW 101 (243)
Q Consensus 37 ~~k~vlV~Fy-A~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~~V~-~PTi~ 101 (243)
.+++++|.|| + .||++| |.+.++.+.+ .++.+.-|.+|+ .....++++++++. ||.+.
T Consensus 46 ~gk~vvl~f~~~--~~C~~C~~~~~~l~~~~~~~---~~v~vv~Is~d~--~~~~~~~~~~~~~~~~~~l~ 109 (171)
T 2yzh_A 46 KDVVQVIITVPS--LDTPVCETETKKFNEIMAGM---EGVDVTVVSMDL--PFAQKRFCESFNIQNVTVAS 109 (171)
T ss_dssp CSSEEEEEECSC--TTSHHHHHHHHHHHHHTTTC---TTEEEEEEESSC--HHHHHHHHHHTTCCSSEEEE
T ss_pred CCCeEEEEEECC--CCCCchHHHHHHHHHHHHHc---CCceEEEEeCCC--HHHHHHHHHHcCCCCeEEee
Confidence 4679999998 7 999999 6677766666 478899998862 22346788899995 88654
No 222
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=97.52 E-value=4.3e-05 Score=60.68 Aligned_cols=58 Identities=10% Similarity=-0.039 Sum_probs=43.6
Q ss_pred cCCeEEEEEE-ecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhcCc-cCceEE
Q psy3889 37 KFHTTLVKFD-IAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRGCL-TPQLLW 101 (243)
Q Consensus 37 ~~k~vlV~Fy-A~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~~V-~~PTi~ 101 (243)
.+++++|.|| + .||++| |.+.++.+.+ .++.+.-|++|+ ......+++++++ +||.+.
T Consensus 41 ~gk~vvl~F~~~--~~c~~C~~~~~~l~~~~~~~---~~v~vv~is~d~--~~~~~~~~~~~~~~~~~~l~ 104 (163)
T 1psq_A 41 DGKKKVLSVVPS--IDTGICSTQTRRFNEELAGL---DNTVVLTVSMDL--PFAQKRWCGAEGLDNAIMLS 104 (163)
T ss_dssp TTSEEEEEECSC--TTSHHHHHHHHHHHHHTTTC---TTEEEEEEESSC--HHHHHHHHHHHTCTTSEEEE
T ss_pred CCCEEEEEEECC--CCCCccHHHHHHHHHHHHHc---CCcEEEEEECCC--HHHHHHHHHhcCCCCcEEec
Confidence 5679999999 6 899999 6777776666 478899998862 2234668888999 488654
No 223
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=97.50 E-value=9.3e-05 Score=62.58 Aligned_cols=52 Identities=8% Similarity=-0.003 Sum_probs=39.4
Q ss_pred cCCeEEEEEE-ecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhc
Q psy3889 37 KFHTTLVKFD-IAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRG 93 (243)
Q Consensus 37 ~~k~vlV~Fy-A~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~ 93 (243)
.+++|||.|| + +||++| |.+.++.+.|+. .++.|.-|++|+ ......+++++
T Consensus 55 ~Gk~vvl~F~pa--twCp~C~~e~p~l~~l~~~~~~-~~v~vv~Is~D~--~~~~~~~~~~~ 111 (221)
T 2c0d_A 55 GQKYCCLLFYPL--NYTFVCPTEIIEFNKHIKDFEN-KNVELLGISVDS--VYSHLAWKNMP 111 (221)
T ss_dssp TTCEEEEEECCC--CTTTCCHHHHHHHHHTHHHHHH-TTEEEEEEESSC--HHHHHHHHHSC
T ss_pred CCCeEEEEEEcC--CCCCchHHHHHHHHHHHHHHHH-CCCEEEEEeCCC--HHHHHHHHHHh
Confidence 5689999999 9 999999 888888888853 478888888852 11235566666
No 224
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=97.50 E-value=0.00011 Score=61.86 Aligned_cols=40 Identities=20% Similarity=0.130 Sum_probs=34.3
Q ss_pred cCCeEEEEEE-ecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecc
Q psy3889 37 KFHTTLVKFD-IAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVK 79 (243)
Q Consensus 37 ~~k~vlV~Fy-A~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~ 79 (243)
.++++||.|| + +||++| |.+.++.+.|.. .++.|..|+++
T Consensus 55 ~Gk~vll~F~pa--~~Cp~C~~~~~~l~~l~~~~~~-~~v~vv~Is~D 99 (220)
T 1zye_A 55 KGKYLVLFFYPL--DFTFVCPTEIIAFSDKASEFHD-VNCEVVAVSVD 99 (220)
T ss_dssp TTSEEEEEECSC--TTCSSSHHHHHHHHHHHHHHHH-TTEEEEEEESS
T ss_pred CCCeEEEEEECC--CCCCCCHHHHHHHHHHHHHHHH-CCCEEEEEECC
Confidence 4589999999 9 999999 888999888853 47899999886
No 225
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=97.49 E-value=8.6e-05 Score=62.10 Aligned_cols=52 Identities=12% Similarity=0.008 Sum_probs=39.5
Q ss_pred cCCeEEEEEE-ecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhc
Q psy3889 37 KFHTTLVKFD-IAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRG 93 (243)
Q Consensus 37 ~~k~vlV~Fy-A~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~ 93 (243)
.+++++|.|| + +||++| |.+.++.+.|+. .++.|.-|++|+ ......+++++
T Consensus 47 ~Gk~vvl~F~pa--t~C~~C~~e~~~l~~l~~~~~~-~~v~vv~Is~D~--~~~~~~~~~~~ 103 (211)
T 2pn8_A 47 RGKYLVFFFYPL--DFTFVCPTEIIAFGDRLEEFRS-INTEVVACSVDS--QFTHLAWINTP 103 (211)
T ss_dssp TTSEEEEEECSC--TTSSHHHHHHHHHHHTHHHHHT-TTEEEEEEESSC--HHHHHHHHTSC
T ss_pred CCCeEEEEEECC--CCCCCCHHHHHHHHHHHHHHHH-CCCEEEEEECCC--HHHHHHHHHHh
Confidence 4689999999 9 999999 888888888853 578899998852 11234566666
No 226
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=97.46 E-value=0.00022 Score=52.95 Aligned_cols=67 Identities=12% Similarity=0.122 Sum_probs=40.6
Q ss_pred hhhHHHHhccCCeEEEEEEec---CCCCCCcHHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhcCcc-CceEE
Q psy3889 28 THNFDKILSKFHTTLVKFDIA---YPYGAKHEAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRGCLT-PQLLW 101 (243)
Q Consensus 28 ~~nF~~~v~~~k~vlV~FyA~---~pWC~~cp~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~~V~-~PTi~ 101 (243)
...+++++..++ |+| |+.. .|||++|.....+-+.. ++.+..+|++. +......+...+|+. +|+++
T Consensus 7 ~~~~~~~i~~~~-vvv-f~~g~~~~~~C~~C~~~~~~L~~~----~i~~~~vdi~~-~~~~~~~l~~~~g~~~vP~v~ 77 (105)
T 2yan_A 7 EERLKVLTNKAS-VML-FMKGNKQEAKCGFSKQILEILNST----GVEYETFDILE-DEEVRQGLKAYSNWPTYPQLY 77 (105)
T ss_dssp HHHHHHHHTSSS-EEE-EESBCSSSBCTTHHHHHHHHHHHH----TCCCEEEEGGG-CHHHHHHHHHHHTCCSSCEEE
T ss_pred HHHHHHHhccCC-EEE-EEecCCCCCCCccHHHHHHHHHHC----CCCeEEEECCC-CHHHHHHHHHHHCCCCCCeEE
Confidence 356777786554 444 4421 28999995444444443 35578888861 111113466778999 99984
No 227
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=97.46 E-value=7.6e-05 Score=62.53 Aligned_cols=40 Identities=10% Similarity=0.048 Sum_probs=34.2
Q ss_pred cCCeEEEEEE-ecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecc
Q psy3889 37 KFHTTLVKFD-IAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVK 79 (243)
Q Consensus 37 ~~k~vlV~Fy-A~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~ 79 (243)
++++++|.|| + +||++| |.+.+++++|+. .++.|..|++|
T Consensus 51 ~gk~vvl~F~pa--~~C~~C~~~~~~l~~l~~~~~~-~~v~vv~Is~D 95 (213)
T 2i81_A 51 GKKYVLLYFYPL--DFTFVCPSEIIALDKALDAFHE-RNVELLGCSVD 95 (213)
T ss_dssp TTCEEEEEECSC--TTSSHHHHHHHHHHHTHHHHHH-TTEEEEEEESS
T ss_pred CCCeEEEEEEcC--CCCCCCHHHHHHHHHHHHHHHH-CCCEEEEEeCC
Confidence 5689999999 9 999999 888888888852 47899999885
No 228
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=97.43 E-value=4.1e-05 Score=64.16 Aligned_cols=25 Identities=8% Similarity=-0.089 Sum_probs=20.0
Q ss_pred cCCeEEEEEEecCCCCCCc----HHHHHHHH
Q psy3889 37 KFHTTLVKFDIAYPYGAKH----EAFLEVAE 63 (243)
Q Consensus 37 ~~k~vlV~FyA~~pWC~~c----p~~~~lA~ 63 (243)
..+.+++.|++ |||||| |.++++.+
T Consensus 85 ~~k~~vv~F~d--~~Cp~C~~~~~~l~~~~~ 113 (211)
T 1t3b_A 85 NEKHVVTVFMD--ITCHYCHLLHQQLKEYND 113 (211)
T ss_dssp TCSEEEEEEEC--TTCHHHHHHHTTHHHHHH
T ss_pred CCCEEEEEEEC--CCCHhHHHHHHHHHHHHh
Confidence 46789999999 999999 66666543
No 229
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=97.42 E-value=8.2e-05 Score=58.56 Aligned_cols=60 Identities=8% Similarity=0.033 Sum_probs=45.2
Q ss_pred cCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhcCccCceE
Q psy3889 37 KFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRGCLTPQLL 100 (243)
Q Consensus 37 ~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~~V~~PTi 100 (243)
.+++++|.||+ .+||++| |.+.++.+.++. .++.+.-|.+| +......++++++++||.+
T Consensus 34 ~gk~~vl~F~~-~~~c~~C~~~~~~l~~~~~~~~~-~~~~vv~vs~d--~~~~~~~~~~~~~~~~~~~ 97 (163)
T 3gkn_A 34 AGHWLVIYFYP-KDSTPGATTEGLDFNALLPEFDK-AGAKILGVSRD--SVKSHDNFCAKQGFAFPLV 97 (163)
T ss_dssp TTSCEEEEECS-CTTSHHHHHHHHHHHHHHHHHHH-TTCEEEEEESS--CHHHHHHHHHHHCCSSCEE
T ss_pred CCCcEEEEEeC-CCCCCcHHHHHHHHHHHHHHHHH-CCCEEEEEeCC--CHHHHHHHHHHhCCCceEE
Confidence 46789999993 3899999 888888888853 46888888885 2234567788888778855
No 230
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=97.41 E-value=0.00013 Score=59.58 Aligned_cols=59 Identities=7% Similarity=-0.021 Sum_probs=43.7
Q ss_pred cCCeEEEEEE-ecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhc----CccCceE
Q psy3889 37 KFHTTLVKFD-IAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRG----CLTPQLL 100 (243)
Q Consensus 37 ~~k~vlV~Fy-A~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~----~V~~PTi 100 (243)
.+++|+|.|| + .||++| |.+.++.+.++. .++.|.-|.+++ .....++++++ +++||.+
T Consensus 29 ~Gk~vvl~F~~~--~~Cp~C~~e~~~l~~~~~~~~~-~~v~vv~Is~d~--~~~~~~~~~~~~~~~~~~fp~l 96 (186)
T 1n8j_A 29 EGRWSVFFFYPA--DFTFVSPTELGDVADHYEELQK-LGVDVYSVSTDT--HFTHKAWHSSSETIAKIKYAMI 96 (186)
T ss_dssp TTSEEEEEECSC--TTCSHHHHHHHHHHHHHHHHHH-TTEEEEEEESSC--HHHHHHHHHHCTTGGGCCSEEE
T ss_pred CCCeEEEEEECC--CCCCccHHHHHHHHHHHHHHHH-CCCEEEEEECCC--HHHHHHHHHHcCcccCCceeEE
Confidence 4689999999 5 899999 888888888853 478898998852 12246677787 5557744
No 231
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=97.40 E-value=0.00011 Score=60.99 Aligned_cols=57 Identities=9% Similarity=-0.051 Sum_probs=42.5
Q ss_pred cCCeEEEEEE-ecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhcCcc-CceE
Q psy3889 37 KFHTTLVKFD-IAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRGCLT-PQLL 100 (243)
Q Consensus 37 ~~k~vlV~Fy-A~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~~V~-~PTi 100 (243)
.+++|+|.|| + .||++| |.+.++.+.+ .++.|.-|.+|+ .....++++++++. ||.+
T Consensus 77 ~Gk~vvl~F~~~--~~c~~C~~e~~~l~~l~~~~---~~v~vv~Is~D~--~~~~~~~~~~~~~~~f~~l 139 (200)
T 3zrd_A 77 AGKRKVLNIFPS--IDTGVCAASVRKFNQLAGEL---ENTVVLCISSDL--PFAQSRFCGAEGLSNVITL 139 (200)
T ss_dssp TTSEEEEEECSC--CCCSCCCHHHHHHHHHHHTS---TTEEEEEEESSC--HHHHTTCTTTTTCTTEEEE
T ss_pred CCCcEEEEEECC--CCCchhHHHHHHHHHHHHHh---CCCEEEEEECCC--HHHHHHHHHHcCCCCceEE
Confidence 5689999999 6 899999 8888888887 478898898851 12234567777884 7743
No 232
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=97.39 E-value=0.00014 Score=61.15 Aligned_cols=40 Identities=13% Similarity=0.071 Sum_probs=34.3
Q ss_pred cCCeEEEEEE-ecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecc
Q psy3889 37 KFHTTLVKFD-IAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVK 79 (243)
Q Consensus 37 ~~k~vlV~Fy-A~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~ 79 (243)
.+++|||.|| + +||++| |.+.++.+.|+ ..++.|.-|++|
T Consensus 68 ~Gk~vll~F~a~--~wC~~C~~~~p~l~~l~~~~~-~~~v~vv~Is~D 112 (222)
T 3ztl_A 68 RGKYVVLFFYPA--DFTFVCPTEIIAFSDQVEEFN-SRNCQVIACSTD 112 (222)
T ss_dssp TTSEEEEEECSC--SSCSHHHHHHHHHHHTHHHHH-TTTEEEEEEESS
T ss_pred CCCeEEEEEECC--CCCCchHHHHHHHHHHHHHHH-HCCCEEEEEECC
Confidence 5689999999 7 999999 88899988886 346899999886
No 233
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=97.37 E-value=0.00015 Score=57.64 Aligned_cols=60 Identities=7% Similarity=-0.073 Sum_probs=43.2
Q ss_pred cCCeEEEEEE-ecCCCCCCc-HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhcCcc-CceEE
Q psy3889 37 KFHTTLVKFD-IAYPYGAKH-EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRGCLT-PQLLW 101 (243)
Q Consensus 37 ~~k~vlV~Fy-A~~pWC~~c-p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~~V~-~PTi~ 101 (243)
.+++++|.|| + .||++| ..+..+.+.+.. .++.+.-|+.|+ ......+++++++. ||.+.
T Consensus 45 ~Gk~vvl~f~~~--~~c~~C~~~~~~l~~~~~~-~~~~vv~is~d~--~~~~~~~~~~~~~~~~~~l~ 107 (166)
T 3p7x_A 45 AGKKKLISVVPS--IDTGVCDQQTRKFNSDASK-EEGIVLTISADL--PFAQKRWCASAGLDNVITLS 107 (166)
T ss_dssp TTSCEEEEECSC--TTSHHHHHHHHHHHHHSCT-TTSEEEEEESSC--HHHHHHHHHHHTCSSCEEEE
T ss_pred CCCcEEEEEECC--CCCCccHHHHHHHHHHhhc-CCCEEEEEECCC--HHHHHHHHHHcCCCceEEcc
Confidence 4678999999 7 899999 445555554443 678899998752 22347788899995 88664
No 234
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=97.37 E-value=0.0002 Score=51.16 Aligned_cols=52 Identities=4% Similarity=0.134 Sum_probs=36.6
Q ss_pred EEEEEEecCCCCCCcHHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhc-Ccc-CceEE
Q psy3889 41 TLVKFDIAYPYGAKHEAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRG-CLT-PQLLW 101 (243)
Q Consensus 41 vlV~FyA~~pWC~~cp~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~-~V~-~PTi~ 101 (243)
.++.|++ |||++|.....+-+.. .+.+..+|++ +....++.+++ ++. +||+.
T Consensus 7 ~v~~y~~--~~C~~C~~~~~~L~~~----~i~~~~vdv~---~~~~~~l~~~~~~~~~vP~l~ 60 (89)
T 2klx_A 7 EIILYTR--PNCPYCKRARDLLDKK----GVKYTDIDAS---TSLRQEMVQRANGRNTFPQIF 60 (89)
T ss_dssp CEEEESC--SCCTTTHHHHHHHHHH----TCCEEEECSC---HHHHHHHHHHHHSSCCSCEEE
T ss_pred eEEEEEC--CCChhHHHHHHHHHHc----CCCcEEEECC---HHHHHHHHHHhCCCCCcCEEE
Confidence 4667999 9999995444444443 2456777774 22457888999 999 99984
No 235
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=97.28 E-value=0.00017 Score=57.39 Aligned_cols=59 Identities=15% Similarity=0.022 Sum_probs=42.1
Q ss_pred cCCeEEEEEE-ecCCCCCCc-----HHHHHHHHHccCCCCcE-EEEEecccCCCcccHHHHhhcCc--cCceE
Q psy3889 37 KFHTTLVKFD-IAYPYGAKH-----EAFLEVAESSKHQPDFL-VAEVGVKDYGERDNEDLAKRGCL--TPQLL 100 (243)
Q Consensus 37 ~~k~vlV~Fy-A~~pWC~~c-----p~~~~lA~~~~~~~~v~-vakVd~~d~~~~~n~~l~~~~~V--~~PTi 100 (243)
++++++|.|| + .||++| |.|.++.++++. .++. |.-|+.++ ......+++++++ +||.+
T Consensus 34 ~gk~vvl~f~~~--~~c~~C~~~e~~~l~~~~~~~~~-~~v~~vv~Is~d~--~~~~~~~~~~~~~~~~~~~l 101 (162)
T 1tp9_A 34 AGKKVILFGVPG--AFTPTCSLKHVPGFIEKAGELKS-KGVTEILCISVND--PFVMKAWAKSYPENKHVKFL 101 (162)
T ss_dssp TTSEEEEEEESC--TTCHHHHHTHHHHHHHHHHHHHH-TTCCCEEEEESSC--HHHHHHHHHTCTTCSSEEEE
T ss_pred CCCcEEEEEeCC--CCCCCCCHHHHHHHHHHHHHHHH-CCCCEEEEEECCC--HHHHHHHHHhcCCCCCeEEE
Confidence 5679999999 8 999999 467777777752 4677 88887752 2234667788887 46643
No 236
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=97.27 E-value=0.00019 Score=57.89 Aligned_cols=59 Identities=14% Similarity=0.079 Sum_probs=42.3
Q ss_pred cCCeEEEEEE-ecCCCCCCc-----HHHHHHHHHccCCCCc-EEEEEecccCCCcccHHHHhhcCcc--CceE
Q psy3889 37 KFHTTLVKFD-IAYPYGAKH-----EAFLEVAESSKHQPDF-LVAEVGVKDYGERDNEDLAKRGCLT--PQLL 100 (243)
Q Consensus 37 ~~k~vlV~Fy-A~~pWC~~c-----p~~~~lA~~~~~~~~v-~vakVd~~d~~~~~n~~l~~~~~V~--~PTi 100 (243)
++++|+|.|| + .||++| |.|.++.++|+. .++ .|.-|+.++ ......+++++++. ||.+
T Consensus 30 ~Gk~vvl~f~~a--~wcp~C~~~e~p~l~~~~~~~~~-~gv~~vv~Is~d~--~~~~~~~~~~~~~~~~fp~l 97 (167)
T 2wfc_A 30 AGKKGVLFAVPG--AFTPGSSKTHLPGYVEQAAAIHG-KGVDIIACMAVND--SFVMDAWGKAHGADDKVQML 97 (167)
T ss_dssp TTSEEEEEEESC--TTCHHHHHTHHHHHHHTHHHHHH-TTCCEEEEEESSC--HHHHHHHHHHTTCTTTSEEE
T ss_pred CCCcEEEEEeCC--CCCCCCCHHHHHHHHHHHHHHHH-CCCCEEEEEeCCC--HHHHHHHHHhcCCCcceEEE
Confidence 5678888887 8 999999 457777777753 468 888888752 22346778888887 8744
No 237
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=97.27 E-value=0.00057 Score=58.37 Aligned_cols=73 Identities=12% Similarity=0.067 Sum_probs=61.1
Q ss_pred CCCceEcCh-hhHHHHhcc-CCeEEEEEEecCCCCCCc-HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhcCcc
Q psy3889 20 SKGHVSLDT-HNFDKILSK-FHTTLVKFDIAYPYGAKH-EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRGCLT 96 (243)
Q Consensus 20 ~~~v~~L~~-~nF~~~v~~-~k~vlV~FyA~~pWC~~c-p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~~V~ 96 (243)
...+.+|++ ++++++++. ++.++|-|+. +||+.. +.|.++|+.+.+ ++.|+.+ .+.+++.+|+++
T Consensus 5 gP~v~~l~s~~~~~~~~~~~~~v~vVgff~--~~~~~~~~~F~~~A~~lr~--~~~F~~t--------~~~~v~~~~~v~ 72 (250)
T 3ec3_A 5 SPPSKEILTLKQVQEFLKDGDDVVILGVFQ--GVGDPGYLQYQDAANTLRE--DYKFHHT--------FSTEIAKFLKVS 72 (250)
T ss_dssp CCSSEECCCHHHHHHHHHHCSSCEEEEECS--CTTCHHHHHHHHHHHHHTT--TCCEEEE--------CCHHHHHHHTCC
T ss_pred CCCceecCCHHHHHHHHhcCCCeEEEEEEc--CCCchHHHHHHHHHHhhhc--CcEEEEE--------CcHHHHHHcCCC
Confidence 356788854 899998877 8899999999 998876 999999999854 7888876 347789999999
Q ss_pred CceEEEec
Q psy3889 97 PQLLWAFC 104 (243)
Q Consensus 97 ~PTi~lF~ 104 (243)
-|+|.+|+
T Consensus 73 ~p~ivlfk 80 (250)
T 3ec3_A 73 LGKLVLMQ 80 (250)
T ss_dssp SSEEEEEC
T ss_pred CCeEEEEe
Confidence 99999996
No 238
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=97.26 E-value=0.00021 Score=60.39 Aligned_cols=59 Identities=14% Similarity=-0.008 Sum_probs=44.7
Q ss_pred cCCeEEEEEE-ecCCCCCCc-----HHHHHHHHHccCCCCc-EEEEEecccCCCcccHHHHhhcCcc-CceE
Q psy3889 37 KFHTTLVKFD-IAYPYGAKH-----EAFLEVAESSKHQPDF-LVAEVGVKDYGERDNEDLAKRGCLT-PQLL 100 (243)
Q Consensus 37 ~~k~vlV~Fy-A~~pWC~~c-----p~~~~lA~~~~~~~~v-~vakVd~~d~~~~~n~~l~~~~~V~-~PTi 100 (243)
++++++|.|| + .||++| |.|.++.+.|+. .++ .|.-|+.++ ......+++++++. ||.+
T Consensus 32 ~gk~vvl~f~~a--~~cp~C~~~e~~~l~~~~~~~~~-~~~~~vv~is~d~--~~~~~~~~~~~~~~~~~~l 98 (241)
T 1nm3_A 32 DNKTVIVFSLPG--AFTPTCSSSHLPRYNELAPVFKK-YGVDDILVVSVND--TFVMNAWKEDEKSENISFI 98 (241)
T ss_dssp TTSEEEEEEESC--SSCHHHHHTHHHHHHHHHHHHHH-TTCCEEEEEESSC--HHHHHHHHHHTTCTTSEEE
T ss_pred CCCeEEEEEeCC--CCCCCCCHHHHHHHHHHHHHHHH-CCCCEEEEEEcCC--HHHHHHHHHhcCCCceEEE
Confidence 5679999999 8 999999 577888877753 468 888888752 22346788888888 8844
No 239
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=97.26 E-value=0.00035 Score=56.80 Aligned_cols=38 Identities=8% Similarity=-0.071 Sum_probs=31.0
Q ss_pred cCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEec
Q psy3889 37 KFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGV 78 (243)
Q Consensus 37 ~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~ 78 (243)
..++++|.|++ +||+|| |.+.++.+.+.. ++.+..+.+
T Consensus 24 ~~~~~i~~f~d--~~Cp~C~~~~~~l~~l~~~~~~--~v~~~~~p~ 65 (192)
T 3h93_A 24 PGKIEVVELFW--YGCPHCYAFEPTIVPWSEKLPA--DVHFVRLPA 65 (192)
T ss_dssp TTSEEEEEEEC--TTCHHHHHHHHHHHHHHHTCCT--TEEEEEEEC
T ss_pred CCCCEEEEEEC--CCChhHHHhhHHHHHHHHhCCC--CeEEEEEeh
Confidence 56789999999 999999 888888887743 677776655
No 240
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=97.25 E-value=0.00039 Score=52.00 Aligned_cols=65 Identities=8% Similarity=0.067 Sum_probs=38.5
Q ss_pred hhHHHHhccCCeEEEEEEecCCCCCCcHHHHHHHHHccCCCCcEEEEEecccCC--Ccc-cHHHHhhcCcc-CceEE
Q psy3889 29 HNFDKILSKFHTTLVKFDIAYPYGAKHEAFLEVAESSKHQPDFLVAEVGVKDYG--ERD-NEDLAKRGCLT-PQLLW 101 (243)
Q Consensus 29 ~nF~~~v~~~k~vlV~FyA~~pWC~~cp~~~~lA~~~~~~~~v~vakVd~~d~~--~~~-n~~l~~~~~V~-~PTi~ 101 (243)
+.+++.+..++ ++.|++ |||++|.....+-+.. .+.+..+|++..+ ..+ ...+.+.+|+. +|++.
T Consensus 10 ~~~~~~i~~~~--v~vy~~--~~Cp~C~~~~~~L~~~----~i~~~~~di~~~~~~~~~~~~~l~~~~g~~tvP~if 78 (113)
T 3rhb_A 10 ESIRKTVTENT--VVIYSK--TWCSYCTEVKTLFKRL----GVQPLVVELDQLGPQGPQLQKVLERLTGQHTVPNVF 78 (113)
T ss_dssp HHHHHHHHHSS--EEEEEC--TTCHHHHHHHHHHHHT----TCCCEEEEGGGSTTHHHHHHHHHHHHHSCCSSCEEE
T ss_pred HHHHHHHhcCC--EEEEEC--CCChhHHHHHHHHHHc----CCCCeEEEeecCCCChHHHHHHHHHHhCCCCcCEEE
Confidence 45556665655 455999 9999995444444444 2334556664210 011 23366667999 99983
No 241
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=97.22 E-value=0.00031 Score=48.88 Aligned_cols=53 Identities=11% Similarity=0.100 Sum_probs=35.6
Q ss_pred EEEEEecCCCCCCcHHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhcCcc-CceEE
Q psy3889 42 LVKFDIAYPYGAKHEAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRGCLT-PQLLW 101 (243)
Q Consensus 42 lV~FyA~~pWC~~cp~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~~V~-~PTi~ 101 (243)
++.|++ |||++|.....+.+.. ++.+..+|++. +.....++.+.+++. +||+.
T Consensus 3 i~~y~~--~~C~~C~~~~~~l~~~----~i~~~~~~i~~-~~~~~~~~~~~~~~~~vP~l~ 56 (82)
T 1fov_A 3 VEIYTK--ETCPYCHRAKALLSSK----GVSFQELPIDG-NAAKREEMIKRSGRTTVPQIF 56 (82)
T ss_dssp EEEEEC--SSCHHHHHHHHHHHHH----TCCCEEEECTT-CSHHHHHHHHHHSSCCSCEEE
T ss_pred EEEEEC--CCChhHHHHHHHHHHC----CCCcEEEECCC-CHHHHHHHHHHhCCCCcCEEE
Confidence 566889 9999995555555443 34566777752 112235678889999 99984
No 242
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=97.22 E-value=0.0011 Score=56.61 Aligned_cols=73 Identities=22% Similarity=0.254 Sum_probs=58.9
Q ss_pred CCCceEcC-hhhHHHHhccCCeEEEEEEecCCCCCC-cHHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhcCccC
Q psy3889 20 SKGHVSLD-THNFDKILSKFHTTLVKFDIAYPYGAK-HEAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRGCLTP 97 (243)
Q Consensus 20 ~~~v~~L~-~~nF~~~v~~~k~vlV~FyA~~pWC~~-cp~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~~V~~ 97 (243)
...+.+|+ .+.+++++..++.++|-|+. +||+. ++.|.++|+.+.. ++.|+.+ .+.+++++|+++-
T Consensus 5 gP~v~~l~s~~~~~~~l~~~~v~vvgff~--~~~~~~~~~f~~~A~~lr~--~~~F~~~--------~~~~v~~~~~~~~ 72 (252)
T 2h8l_A 5 SPASVPLRTEEEFKKFISDKDASIVGFFD--DSFSEAHSEFLKAASNLRD--NYRFAHT--------NVESLVNEYDDNG 72 (252)
T ss_dssp -CCEEECCSHHHHHHHHTSSSCEEEEEES--CTTSHHHHHHHHHHHHTTT--TSCEEEE--------CCHHHHHHHCSSS
T ss_pred CCCceeecCHHHHHHHhhcCCeEEEEEEC--CCCChHHHHHHHHHHhccc--CcEEEEE--------ChHHHHHHhCCCC
Confidence 34688885 67777888877889999999 99875 4999999999854 7888876 2467999999988
Q ss_pred ceEEEec
Q psy3889 98 QLLWAFC 104 (243)
Q Consensus 98 PTi~lF~ 104 (243)
|++++|+
T Consensus 73 p~i~~fk 79 (252)
T 2h8l_A 73 EGIILFR 79 (252)
T ss_dssp EEEEEEC
T ss_pred CcEEEEc
Confidence 9998875
No 243
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=97.20 E-value=0.00062 Score=54.52 Aligned_cols=73 Identities=14% Similarity=0.025 Sum_probs=49.8
Q ss_pred cCCeEEEEEEecCCCCCC-c----HHHHHHHHHccC-CCCcEEEEEecccCCCc-ccHHHHhhcCccCceEEEe--ccch
Q psy3889 37 KFHTTLVKFDIAYPYGAK-H----EAFLEVAESSKH-QPDFLVAEVGVKDYGER-DNEDLAKRGCLTPQLLWAF--CVAD 107 (243)
Q Consensus 37 ~~k~vlV~FyA~~pWC~~-c----p~~~~lA~~~~~-~~~v~vakVd~~d~~~~-~n~~l~~~~~V~~PTi~lF--~~~~ 107 (243)
.+++++|.||+ +||+. | |.+.++.+.+.. ..++.+.-|.+|..|.. ...+.++++++.+|...+. .+.+
T Consensus 27 ~Gk~vll~F~~--t~C~~~C~~~~~~l~~~~~~~~~~~~~~~vv~is~d~~d~~~~~~~~~~~~~~~~~~w~~l~~~~~~ 104 (170)
T 3me7_A 27 KGKPIILSPIY--THCRAACPLITKSLLKVIPKLGTPGKDFWVITFTFDPKDTLEDIKRFQKEYGIDGKGWKVVKAKTSE 104 (170)
T ss_dssp TTSCEEEEEEC--TTCCSHHHHHHHHHHTTHHHHCCBTTTBEEEEEECCTTCCHHHHHHHHHHTTCCSSSEEEEEESSHH
T ss_pred CCCEEEEEEEC--CCCCchhHHHHHHHHHHHHHhhhcCCceEEEEEECCCCCCHHHHHHHHHHcCCCCCCeEEEeCCCHH
Confidence 47899999999 99985 9 788888888742 35688888888521111 2366778888887764332 2445
Q ss_pred Hhhh
Q psy3889 108 SLNK 111 (243)
Q Consensus 108 ~l~~ 111 (243)
.+.+
T Consensus 105 ~~~~ 108 (170)
T 3me7_A 105 DLFK 108 (170)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5555
No 244
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=97.19 E-value=0.00042 Score=59.94 Aligned_cols=52 Identities=12% Similarity=0.008 Sum_probs=39.2
Q ss_pred cCCeEEEEEE-ecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhc
Q psy3889 37 KFHTTLVKFD-IAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRG 93 (243)
Q Consensus 37 ~~k~vlV~Fy-A~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~ 93 (243)
.+++++|.|| + .||++| |.+.++.+.|+. .++.|.-|.+|. ......+++++
T Consensus 90 kGK~vvL~F~~a--~~cp~C~~el~~l~~l~~~~~~-~gv~vv~IS~D~--~~~~~~~~~~~ 146 (254)
T 3tjj_A 90 RGKYLVFFFYPL--DFTFVCPTEIIAFGDRLEEFRS-INTEVVACSVDS--QFTHLAWINTP 146 (254)
T ss_dssp TTSEEEEEECSC--TTCSSCCHHHHHHHHTHHHHHT-TTEEEEEEESSC--HHHHHHHHTSC
T ss_pred CCCeEEEEEECC--CCCCchHHHHHHHHHHHHHHHH-cCCEEEEEcCCC--HHHHHHHHHHH
Confidence 5689999999 8 999999 888899888863 478888898862 11234566554
No 245
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=97.18 E-value=0.00024 Score=57.32 Aligned_cols=65 Identities=11% Similarity=0.078 Sum_probs=43.9
Q ss_pred HHHHhccCCeEEEEEEecCCCCCCc-----HHHHHHHHHccCCCCcE-EEEEecccCCCcccHHHHhhcCc-c-CceE
Q psy3889 31 FDKILSKFHTTLVKFDIAYPYGAKH-----EAFLEVAESSKHQPDFL-VAEVGVKDYGERDNEDLAKRGCL-T-PQLL 100 (243)
Q Consensus 31 F~~~v~~~k~vlV~FyA~~pWC~~c-----p~~~~lA~~~~~~~~v~-vakVd~~d~~~~~n~~l~~~~~V-~-~PTi 100 (243)
+.+...+.+.||+.||+ .||++| |.|.++.++|+. .++. |.-|+.++ ....+.+++++++ . ||.+
T Consensus 37 l~~~~~gk~vvl~~~~a--~wcp~C~~eh~p~l~~~~~~~~~-~g~~~vv~Is~d~--~~~~~~~~~~~~~~~~fp~l 109 (171)
T 2pwj_A 37 VNDIFKDKKVVIFGLPG--AYTGVCSSKHVPPYKHNIDKFKA-KGVDSVICVAIND--PYTVNAWAEKIQAKDAIEFY 109 (171)
T ss_dssp HHHHHTTSEEEEEECSC--TTCTTHHHHTHHHHHHTHHHHHH-TTCSEEEEEESSC--HHHHHHHHHHTTCTTTSEEE
T ss_pred HHHHhCCCCEEEEEecC--CCCCCCCHHHHHHHHHHHHHHHH-CCCCEEEEEeCCC--HHHHHHHHHHhCCCCceEEE
Confidence 33433333577888999 999999 456677777752 3677 88888752 2235778888998 3 8843
No 246
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=97.11 E-value=0.00051 Score=58.63 Aligned_cols=35 Identities=6% Similarity=-0.009 Sum_probs=23.2
Q ss_pred cCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEe
Q psy3889 37 KFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVG 77 (243)
Q Consensus 37 ~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd 77 (243)
..+.+++.|+. ||||+| |.+.++.+ ..+|.|..+.
T Consensus 96 ~ak~~v~~F~D--~~Cp~C~~~~~~l~~~~~----~g~v~v~~~~ 134 (241)
T 1v58_A 96 DAPVIVYVFAD--PFCPYCKQFWQQARPWVD----SGKVQLRTLL 134 (241)
T ss_dssp TCSEEEEEEEC--TTCHHHHHHHHHHHHHHH----TTSEEEEEEE
T ss_pred CCCeEEEEEEC--CCChhHHHHHHHHHHHHh----CCcEEEEEEE
Confidence 35679999999 999999 44444333 2356665443
No 247
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=97.09 E-value=0.00066 Score=52.67 Aligned_cols=69 Identities=6% Similarity=0.050 Sum_probs=44.5
Q ss_pred hhhHHHHhccCCeEEEEEEecCCCCCCcHHH-HHHHHHccCCCCcEEEEEecccCCC--cccHHHHhhcCcc-CceEE
Q psy3889 28 THNFDKILSKFHTTLVKFDIAYPYGAKHEAF-LEVAESSKHQPDFLVAEVGVKDYGE--RDNEDLAKRGCLT-PQLLW 101 (243)
Q Consensus 28 ~~nF~~~v~~~k~vlV~FyA~~pWC~~cp~~-~~lA~~~~~~~~v~vakVd~~d~~~--~~n~~l~~~~~V~-~PTi~ 101 (243)
.+.+++.+...+ +|.|+. |||++|... ..+-.... ..++.+..+|++..++ ....++.+.+|+. +|+++
T Consensus 27 ~~~v~~~i~~~~--Vvvy~~--~~Cp~C~~a~k~~L~~~~-~~~i~~~~vdvd~~~~~~~~~~~L~~~~g~~tVP~vf 99 (129)
T 3ctg_A 27 VAHVKDLIGQKE--VFVAAK--TYCPYCKATLSTLFQELN-VPKSKALVLELDEMSNGSEIQDALEEISGQKTVPNVY 99 (129)
T ss_dssp HHHHHHHHHHSS--EEEEEC--TTCHHHHHHHHHHHTTSC-CCGGGEEEEEGGGSTTHHHHHHHHHHHHSCCSSCEEE
T ss_pred HHHHHHHHcCCC--EEEEEC--CCCCchHHHHHHHHHhcC-ccCCCcEEEEccccCCHHHHHHHHHHHhCCCCCCEEE
Confidence 456666675554 566999 999999766 66665542 1235566777752111 0125788899999 99973
No 248
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=97.04 E-value=0.00068 Score=50.13 Aligned_cols=57 Identities=9% Similarity=0.060 Sum_probs=34.9
Q ss_pred CCeEEEEEEecCCCCCCcHHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhc-Ccc-CceEE
Q psy3889 38 FHTTLVKFDIAYPYGAKHEAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRG-CLT-PQLLW 101 (243)
Q Consensus 38 ~k~vlV~FyA~~pWC~~cp~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~-~V~-~PTi~ 101 (243)
....++.|++ |||++|..-.++-+.. ++.+..+|++. +.....++.+.. +.. +|++.
T Consensus 14 ~~~~v~vy~~--~~Cp~C~~ak~~L~~~----~i~y~~idI~~-~~~~~~~l~~~~~g~~~vP~if 72 (99)
T 3qmx_A 14 VSAKIEIYTW--STCPFCMRALALLKRK----GVEFQEYCIDG-DNEAREAMAARANGKRSLPQIF 72 (99)
T ss_dssp CCCCEEEEEC--TTCHHHHHHHHHHHHH----TCCCEEEECTT-CHHHHHHHHHHTTTCCCSCEEE
T ss_pred CCCCEEEEEc--CCChhHHHHHHHHHHC----CCCCEEEEcCC-CHHHHHHHHHHhCCCCCCCEEE
Confidence 3445666999 9999995555554444 34466778751 111113355555 888 99983
No 249
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=96.96 E-value=0.00058 Score=55.61 Aligned_cols=40 Identities=10% Similarity=0.101 Sum_probs=34.2
Q ss_pred ccCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecc
Q psy3889 36 SKFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVK 79 (243)
Q Consensus 36 ~~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~ 79 (243)
.++++++|.|++ +||++| |.++++.+.+.. ++.+..++++
T Consensus 23 ~~~~~~vv~f~d--~~Cp~C~~~~~~l~~l~~~~~~--~v~~~~~~~~ 66 (195)
T 3hd5_A 23 TPGKIEVLEFFA--YTCPHCAAIEPMVEDWAKTAPQ--DVVLKQVPIA 66 (195)
T ss_dssp STTCEEEEEEEC--TTCHHHHHHHHHHHHHHHTCCT--TEEEEEEECC
T ss_pred CCCCeEEEEEEC--CCCccHHHhhHHHHHHHHHCCC--CeEEEEEecc
Confidence 357889999999 999999 888888888754 7899999885
No 250
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=96.94 E-value=0.0007 Score=51.05 Aligned_cols=67 Identities=9% Similarity=0.121 Sum_probs=41.5
Q ss_pred hhhHHHHhccCCeEEEEEEecCCCCCCcHHHHHHHHHccCCCCcEEEEEecccCCCc-c-cHHHHhhcCcc-CceEEE
Q psy3889 28 THNFDKILSKFHTTLVKFDIAYPYGAKHEAFLEVAESSKHQPDFLVAEVGVKDYGER-D-NEDLAKRGCLT-PQLLWA 102 (243)
Q Consensus 28 ~~nF~~~v~~~k~vlV~FyA~~pWC~~cp~~~~lA~~~~~~~~v~vakVd~~d~~~~-~-n~~l~~~~~V~-~PTi~l 102 (243)
...+++.+++++.++ |+. ||||+|..-..+-+.. .+.+-.+|++..++. + ...+.+..|.. +|++.+
T Consensus 7 ~~~~~~~i~~~~v~v--y~~--~~Cp~C~~ak~~L~~~----~i~~~~~dvd~~~~~~~~~~~l~~~~g~~tvP~vfi 76 (114)
T 3h8q_A 7 RRHLVGLIERSRVVI--FSK--SYCPHSTRVKELFSSL----GVECNVLELDQVDDGARVQEVLSEITNQKTVPNIFV 76 (114)
T ss_dssp HHHHHHHHHHCSEEE--EEC--TTCHHHHHHHHHHHHT----TCCCEEEETTTSTTHHHHHHHHHHHHSCCSSCEEEE
T ss_pred HHHHHHHhccCCEEE--EEc--CCCCcHHHHHHHHHHc----CCCcEEEEecCCCChHHHHHHHHHHhCCCccCEEEE
Confidence 456778886655433 999 9999996555555544 234556666421111 1 13466778888 999853
No 251
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=96.93 E-value=0.0091 Score=47.14 Aligned_cols=78 Identities=17% Similarity=0.054 Sum_probs=56.8
Q ss_pred CCceEcChhhHHHHhccCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhcCcc
Q psy3889 21 KGHVSLDTHNFDKILSKFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRGCLT 96 (243)
Q Consensus 21 ~~v~~L~~~nF~~~v~~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~~V~ 96 (243)
.-|.++|.+|..++.++.-++.+.++. ++--..- +.|.++|+.+++ ++.|+.||.+ +..+..+.+.||++
T Consensus 14 PLV~e~t~en~~~~~~~~~~~~~l~f~-~~~~~~~~~~~~~~~~vAk~fkg--ki~Fv~vd~~---~~~~~~~l~~fGl~ 87 (147)
T 3bj5_A 14 PLVIEFTEQTAPKIFGGEIKTHILLFL-PKSVSDYDGKLSNFKTAAESFKG--KILFAFIDSD---HTDNQRILEFFGLK 87 (147)
T ss_dssp -CEEECCTTTHHHHHSSSCCEEEEEEC-CTTSSSHHHHHHHHHHHHHTTTT--TCEEEEECTT---CGGGHHHHHHTTCC
T ss_pred CeeEEeccccHHHHhcCCCceEEEEEe-cCCcHhHHHHHHHHHHHHHHcCC--ceEEEEEecc---hHhHHHHHHHcCCC
Confidence 358999999999988665555444343 0222221 889999999975 7999999983 12667788999998
Q ss_pred ---CceEEEec
Q psy3889 97 ---PQLLWAFC 104 (243)
Q Consensus 97 ---~PTi~lF~ 104 (243)
+|++.++.
T Consensus 88 ~~~~P~v~i~~ 98 (147)
T 3bj5_A 88 KEECPAVRLIT 98 (147)
T ss_dssp GGGCSEEEEEE
T ss_pred cccCCEEEEEe
Confidence 89998875
No 252
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=96.90 E-value=0.00058 Score=56.12 Aligned_cols=60 Identities=17% Similarity=0.057 Sum_probs=41.3
Q ss_pred cCCe-EEEEEEecCCCCCCc-----HHHHHHHHHccCCCCcE-EEEEecccCCCcccHHHHhhcCcc--CceEE
Q psy3889 37 KFHT-TLVKFDIAYPYGAKH-----EAFLEVAESSKHQPDFL-VAEVGVKDYGERDNEDLAKRGCLT--PQLLW 101 (243)
Q Consensus 37 ~~k~-vlV~FyA~~pWC~~c-----p~~~~lA~~~~~~~~v~-vakVd~~d~~~~~n~~l~~~~~V~--~PTi~ 101 (243)
++++ ||+.|++ .||+.| |.|.+++++|+. .++. |.-|+.++ ....+.+++++++. ||.+.
T Consensus 55 ~Gk~vvL~f~~a--~wcp~C~~~e~p~l~~~~~~~~~-~gv~~vv~Is~d~--~~~~~~f~~~~~~~~~fp~l~ 123 (184)
T 3uma_A 55 KGKRVVLFAVPG--AFTPTCSLNHLPGYLENRDAILA-RGVDDIAVVAVND--LHVMGAWATHSGGMGKIHFLS 123 (184)
T ss_dssp TTSEEEEEEESC--TTCHHHHHTHHHHHHHTHHHHHT-TTCCEEEEEESSC--HHHHHHHHHHHTCTTTSEEEE
T ss_pred CCCCEEEEEEcC--CCCCCcCHHHHHHHHHHHHHHHH-cCCCEEEEEECCC--HHHHHHHHHHhCCCCceEEEE
Confidence 3454 4555568 999999 557788877753 4677 88888862 22346788888887 77553
No 253
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=96.87 E-value=0.0011 Score=47.24 Aligned_cols=53 Identities=6% Similarity=0.010 Sum_probs=35.0
Q ss_pred EEEEEEecCCCCCCcHHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhcCcc-CceE
Q psy3889 41 TLVKFDIAYPYGAKHEAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRGCLT-PQLL 100 (243)
Q Consensus 41 vlV~FyA~~pWC~~cp~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~~V~-~PTi 100 (243)
.++.|++ |||++|.....+-+.. ++.+..+|++. +.....++.+.+++. +|++
T Consensus 7 ~v~ly~~--~~C~~C~~~~~~L~~~----~i~~~~~di~~-~~~~~~~l~~~~~~~~vP~l 60 (92)
T 2khp_A 7 DVIIYTR--PGCPYCARAKALLARK----GAEFNEIDASA-TPELRAEMQERSGRNTFPQI 60 (92)
T ss_dssp CEEEEEC--TTCHHHHHHHHHHHHT----TCCCEEEESTT-SHHHHHHHHHHHTSSCCCEE
T ss_pred cEEEEEC--CCChhHHHHHHHHHHc----CCCcEEEECCC-CHHHHHHHHHHhCCCCcCEE
Confidence 3667999 9999995555554443 35567788851 111124566789999 9986
No 254
>2axo_A Hypothetical protein ATU2684; alpha beta protein., structural genomics, PSI, protein struc initiative; 1.80A {Agrobacterium tumefaciens str} SCOP: c.47.1.19
Probab=96.85 E-value=0.0016 Score=57.06 Aligned_cols=62 Identities=8% Similarity=-0.101 Sum_probs=39.0
Q ss_pred CeEEEEEEecCCCCCCcHHHHHHHHHccCCCCcEEEEEecccCC-------------CcccHHHHhhcCcc-C--ceEEE
Q psy3889 39 HTTLVKFDIAYPYGAKHEAFLEVAESSKHQPDFLVAEVGVKDYG-------------ERDNEDLAKRGCLT-P--QLLWA 102 (243)
Q Consensus 39 k~vlV~FyA~~pWC~~cp~~~~lA~~~~~~~~v~vakVd~~d~~-------------~~~n~~l~~~~~V~-~--PTi~l 102 (243)
+..+..|+. |||++||.-+++.+..+...++....++++++| ...++.+.+++|.+ + |++++
T Consensus 43 ~~~VelyTs--~gCp~C~~Ak~lL~~~~~~~~vi~l~~~v~~~dylgw~D~~a~~~~~~r~~~~~~~~G~~tVyTPqI~I 120 (270)
T 2axo_A 43 KGVVELFTS--QGCASCPPADEALRKMIQKGDVVGLSYHVDYWNYLGWTDSLASKENTERQYGYMRALGRNGVYTPQAIL 120 (270)
T ss_dssp CCEEEEEEC--TTCTTCHHHHHHHHHHHHHTSSEEEEEECSTTCSSSSCCTTCCHHHHHHHHHHHHHTTCSCCCSSEEEE
T ss_pred CcEEEEEeC--CCCCChHHHHHHHHHhhccCCeeeEEEEEEEecccccccchhhhhhhHHHHHHHHHhCCCcccCCEEEE
Confidence 356666888 999999766666555433345644445543322 12235578899998 8 99874
No 255
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=96.82 E-value=0.00095 Score=54.27 Aligned_cols=59 Identities=19% Similarity=0.092 Sum_probs=39.5
Q ss_pred cCCeEEEEEE-ecCCCCCCc-----HHHHHHHHHccCCCCcEEE-EEecccCCCcccHHHHhhcCcc--CceE
Q psy3889 37 KFHTTLVKFD-IAYPYGAKH-----EAFLEVAESSKHQPDFLVA-EVGVKDYGERDNEDLAKRGCLT--PQLL 100 (243)
Q Consensus 37 ~~k~vlV~Fy-A~~pWC~~c-----p~~~~lA~~~~~~~~v~va-kVd~~d~~~~~n~~l~~~~~V~--~PTi 100 (243)
++++|++.|| + .||+.| |.|.+++++|+. .++.+. -|..|+ ......+++++++. ||.+
T Consensus 42 ~gk~vvL~f~pa--~wcp~C~~~e~p~l~~~~~~~~~-~gv~vv~~iS~D~--~~~~~~f~~~~~~~~~fp~l 109 (173)
T 3mng_A 42 KGKKGVLFGVPG--AFTPGCSKTHLPGFVEQAEALKA-KGVQVVACLSVND--AFVTGEWGRAHKAEGKVRLL 109 (173)
T ss_dssp TTSEEEEEECSC--TTCHHHHHTHHHHHHHTHHHHHT-TTCCEEEEEESSC--HHHHHHHHHHTTCTTTCEEE
T ss_pred CCCcEEEEEEeC--CCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEEcCCC--HHHHHHHHHHhCCCCceEEE
Confidence 4565555555 8 999999 677888888853 355555 377752 22346788888887 8843
No 256
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=96.80 E-value=0.0014 Score=55.94 Aligned_cols=53 Identities=9% Similarity=-0.046 Sum_probs=39.0
Q ss_pred cCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhc
Q psy3889 37 KFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRG 93 (243)
Q Consensus 37 ~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~ 93 (243)
.+++++|.||+ ..||++| |.+.++.+.|+. .++.|.-|.+|+ .......++++
T Consensus 76 ~Gk~vvL~F~~-~~~cp~C~~el~~l~~l~~~~~~-~gv~vv~Is~D~--~~~~~~~~~~~ 132 (240)
T 3qpm_A 76 RGKYLVFFFYP-LDFTFVCPTEIIAFSDRVHEFRA-INTEVVACSVDS--QFTHLAWIITP 132 (240)
T ss_dssp TTSEEEEEECS-CTTSSHHHHHHHHHHHHHHHHHT-TTEEEEEEESSC--HHHHHHHHHSC
T ss_pred CCCEEEEEEEC-CCCCCchHHHHHHHHHHHHHHHH-CCCEEEEEECCC--HHHHHHHHHHH
Confidence 56899999985 5899999 889999988863 468888898862 11234556554
No 257
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=96.80 E-value=0.0065 Score=54.82 Aligned_cols=77 Identities=12% Similarity=-0.043 Sum_probs=59.9
Q ss_pred CCceEcChhhHHHHhccCCeEEEEEEecCCCCCC-cHHH-HHHHHHccC-CCCcEEEEEecccCCCcccHHHHhhcCcc-
Q psy3889 21 KGHVSLDTHNFDKILSKFHTTLVKFDIAYPYGAK-HEAF-LEVAESSKH-QPDFLVAEVGVKDYGERDNEDLAKRGCLT- 96 (243)
Q Consensus 21 ~~v~~L~~~nF~~~v~~~k~vlV~FyA~~pWC~~-cp~~-~~lA~~~~~-~~~v~vakVd~~d~~~~~n~~l~~~~~V~- 96 (243)
..+.++|.+|+.++...+.+++|.|+. +||.. +..| +.+++.... ...+.++.+|++ .+..+++.||+.
T Consensus 219 p~v~elt~~~~~~~~~~~~~~~v~f~~--~~~~~~~~~~~~~~~~~~~~~~~~i~f~~id~~-----~~~~~~~~~gl~~ 291 (382)
T 2r2j_A 219 PLVREITFENGEELTEEGLPFLILFHM--KEDTESLEIFQNEVARQLISEKGTINFLHADCD-----KFRHPLLHIQKTP 291 (382)
T ss_dssp CSSEECCHHHHHHHHTTCCCEEEEEEC--TTCCHHHHHHHHHHHHHTGGGTTTSEEEEEETT-----TTHHHHHHTTCCG
T ss_pred CceEecChhhHHHHhcCCCcEEEEEec--CCchHHHHHHHHHHHHHHHHhCCeeEEEEEchH-----HhHHHHHHcCCCc
Confidence 568899999999988888899999999 99754 3555 344443321 247999999997 678889999996
Q ss_pred --CceEEEec
Q psy3889 97 --PQLLWAFC 104 (243)
Q Consensus 97 --~PTi~lF~ 104 (243)
+|++.++.
T Consensus 292 ~~~P~i~i~~ 301 (382)
T 2r2j_A 292 ADCPVIAIDS 301 (382)
T ss_dssp GGCSEEEEEC
T ss_pred cCCCEEEEEc
Confidence 89998765
No 258
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=96.79 E-value=0.0016 Score=45.78 Aligned_cols=57 Identities=5% Similarity=-0.147 Sum_probs=36.8
Q ss_pred EEEEEEecCCCCCCcHHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhcCc-----c-CceEEE
Q psy3889 41 TLVKFDIAYPYGAKHEAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRGCL-----T-PQLLWA 102 (243)
Q Consensus 41 vlV~FyA~~pWC~~cp~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~~V-----~-~PTi~l 102 (243)
.++.|++ |||++|.....+.+... -++.+..||.+. +.....++.+.+|. . +|++.+
T Consensus 5 ~v~ly~~--~~Cp~C~~~~~~L~~~~--i~~~~~~vd~~~-~~~~~~el~~~~g~~~~~~~~vP~i~i 67 (89)
T 3msz_A 5 KVKIYTR--NGCPYCVWAKQWFEENN--IAFDETIIDDYA-QRSKFYDEMNQSGKVIFPISTVPQIFI 67 (89)
T ss_dssp CEEEEEC--TTCHHHHHHHHHHHHTT--CCCEEEECCSHH-HHHHHHHHHHTTTCCSSCCCSSCEEEE
T ss_pred EEEEEEc--CCChhHHHHHHHHHHcC--CCceEEEeecCC-ChhHHHHHHHHhCCCCCCCCccCEEEE
Confidence 4667888 99999955555555542 245666666641 00012568888888 8 999953
No 259
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=96.77 E-value=0.00084 Score=55.16 Aligned_cols=39 Identities=15% Similarity=0.074 Sum_probs=32.9
Q ss_pred cCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecc
Q psy3889 37 KFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVK 79 (243)
Q Consensus 37 ~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~ 79 (243)
+.++++|.|++ +||+|| |.+.++.+.+.. ++.+..+++.
T Consensus 23 ~~~v~vv~f~d--~~Cp~C~~~~~~l~~~~~~~~~--~v~~~~~p~~ 65 (193)
T 3hz8_A 23 AGKVEVLEFFG--YFCPHCAHLEPVLSKHAKSFKD--DMYLRTEHVV 65 (193)
T ss_dssp TTSEEEEEEEC--TTCHHHHHHHHHHHHHHTTCCT--TEEEEEEECC
T ss_pred CCCcEEEEEEC--CCChhHHHHHHHHHHHHHHCCC--CeEEEEecCC
Confidence 46789999999 999999 888888877643 7889999885
No 260
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=96.73 E-value=0.0037 Score=45.81 Aligned_cols=54 Identities=9% Similarity=0.041 Sum_probs=33.4
Q ss_pred EEEEEecCCCCCCcHHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhh-cCcc-CceEEE
Q psy3889 42 LVKFDIAYPYGAKHEAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKR-GCLT-PQLLWA 102 (243)
Q Consensus 42 lV~FyA~~pWC~~cp~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~-~~V~-~PTi~l 102 (243)
++-|.. ||||+|..-.++-+.. ++.+-.+|++. |......+.+. .|.+ +|+|.+
T Consensus 6 I~vYs~--~~Cp~C~~aK~~L~~~----gi~y~~idi~~-d~~~~~~~~~~~~G~~tVP~I~i 61 (92)
T 2lqo_A 6 LTIYTT--SWCGYCLRLKTALTAN----RIAYDEVDIEH-NRAAAEFVGSVNGGNRTVPTVKF 61 (92)
T ss_dssp EEEEEC--TTCSSHHHHHHHHHHT----TCCCEEEETTT-CHHHHHHHHHHSSSSSCSCEEEE
T ss_pred EEEEcC--CCCHhHHHHHHHHHhc----CCceEEEEcCC-CHHHHHHHHHHcCCCCEeCEEEE
Confidence 566888 9999996655555443 46677888861 11111223333 2778 999865
No 261
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=96.69 E-value=0.00097 Score=47.62 Aligned_cols=55 Identities=5% Similarity=0.041 Sum_probs=34.2
Q ss_pred EEEEEecCCCCCCcHHHHHHHHHccCCCCcEEEEEecccCCCccc----HHHHhhcCcc-CceEEE
Q psy3889 42 LVKFDIAYPYGAKHEAFLEVAESSKHQPDFLVAEVGVKDYGERDN----EDLAKRGCLT-PQLLWA 102 (243)
Q Consensus 42 lV~FyA~~pWC~~cp~~~~lA~~~~~~~~v~vakVd~~d~~~~~n----~~l~~~~~V~-~PTi~l 102 (243)
++.|++ |||++|.....+.+... +.+-.+|++..+..++ .++.+.+++. +|++.+
T Consensus 14 v~ly~~--~~Cp~C~~~~~~L~~~g----i~~~~~~v~~~~~~~~~~~~~~l~~~~g~~~vP~l~~ 73 (92)
T 3ic4_A 14 VLMYGL--STCPHCKRTLEFLKREG----VDFEVIWIDKLEGEERKKVIEKVHSISGSYSVPVVVK 73 (92)
T ss_dssp SEEEEC--TTCHHHHHHHHHHHHHT----CCCEEEEGGGCCHHHHHHHHHHHHHHHSSSCSCEEEE
T ss_pred EEEEEC--CCChHHHHHHHHHHHcC----CCcEEEEeeeCCccchHHHHHHHHHhcCCCCcCEEEE
Confidence 556889 99999944444444432 2234455542121123 6778889999 999976
No 262
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=96.68 E-value=0.0015 Score=55.19 Aligned_cols=37 Identities=5% Similarity=0.035 Sum_probs=29.9
Q ss_pred eEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecc
Q psy3889 40 TTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVK 79 (243)
Q Consensus 40 ~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~ 79 (243)
.||+.|++ .||+.| |.+.++.++|+. .++.+.-|.+|
T Consensus 34 vvL~~~~a--~~cp~C~~el~~l~~l~~~f~~-~~v~vi~IS~D 74 (224)
T 1prx_A 34 GILFSHPR--DFTPVCTTELGRAAKLAPEFAK-RNVKLIALSID 74 (224)
T ss_dssp EEEEEESC--SSCHHHHHHHHHHHHHHHHHHT-TTEEEEEEESS
T ss_pred EEEEEECC--CCCCCcHHHHHHHHHHHHHHHH-CCCEEEEEcCC
Confidence 56666678 999999 788888888853 57889999886
No 263
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=96.52 E-value=0.0011 Score=57.34 Aligned_cols=45 Identities=13% Similarity=0.076 Sum_probs=34.4
Q ss_pred HHHhccCCe-EEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecc
Q psy3889 32 DKILSKFHT-TLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVK 79 (243)
Q Consensus 32 ~~~v~~~k~-vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~ 79 (243)
.+.+..+++ ||+.|++ +||+.| |.|.++.++|+. .++.|..|++|
T Consensus 27 ~d~l~~GK~vVL~~fpa--~~CpvC~tEl~~l~~l~~ef~~-~gv~VI~VS~D 76 (249)
T 3a2v_A 27 DHYVSQGKWFVLFSHPA--DFTPVCTTEFVSFARRYEDFQR-LGVDLIGLSVD 76 (249)
T ss_dssp HHHHTTTCEEEEECCSC--TTCHHHHHHHHHHHHTHHHHHH-TTEEEEEEESS
T ss_pred HHHhhCCCEEEEEEEcC--CCCcChHHHHHHHHHHHHHHHh-CCcEEEEEECC
Confidence 455535665 5667889 999999 788888888853 47899999886
No 264
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=96.52 E-value=0.0031 Score=46.35 Aligned_cols=59 Identities=5% Similarity=-0.076 Sum_probs=33.7
Q ss_pred CCeEEEEEEecCCCCCCcHHHHHHHHHccCCCCcEEEEEecccCCCcccHHH----HhhcCcc-CceEEE
Q psy3889 38 FHTTLVKFDIAYPYGAKHEAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDL----AKRGCLT-PQLLWA 102 (243)
Q Consensus 38 ~k~vlV~FyA~~pWC~~cp~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l----~~~~~V~-~PTi~l 102 (243)
.+..++.|++ |||++|.....+-+.. .+.+-.+|++..+..+..++ .+.+++. +|++.+
T Consensus 20 ~~~~v~ly~~--~~Cp~C~~ak~~L~~~----~i~y~~vdI~~~~~~~~~~~~~~l~~~~g~~~vP~l~i 83 (103)
T 3nzn_A 20 DRGKVIMYGL--STCVWCKKTKKLLTDL----GVDFDYVYVDRLEGKEEEEAVEEVRRFNPSVSFPTTII 83 (103)
T ss_dssp CCSCEEEEEC--SSCHHHHHHHHHHHHH----TBCEEEEEGGGCCHHHHHHHHHHHHHHCTTCCSCEEEE
T ss_pred CCCeEEEEcC--CCCchHHHHHHHHHHc----CCCcEEEEeeccCcccHHHHHHHHHHhCCCCccCEEEE
Confidence 3445666999 9999995444444443 23345566641111112233 3446889 999875
No 265
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=96.47 E-value=0.0056 Score=45.53 Aligned_cols=67 Identities=12% Similarity=0.129 Sum_probs=41.2
Q ss_pred hhhHHHHhccCCeEEEEEEecC---CCCCCcHHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhcCcc-CceEE
Q psy3889 28 THNFDKILSKFHTTLVKFDIAY---PYGAKHEAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRGCLT-PQLLW 101 (243)
Q Consensus 28 ~~nF~~~v~~~k~vlV~FyA~~---pWC~~cp~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~~V~-~PTi~ 101 (243)
.+.+++++.+.+ |+| |+... |||++|....++-+.. ++.+..+|++. +......+.+.+|.. +|++.
T Consensus 5 ~~~~~~~i~~~~-vvv-y~~g~~~~~~Cp~C~~ak~~L~~~----~i~~~~vdi~~-~~~~~~~l~~~~g~~~vP~if 75 (109)
T 1wik_A 5 SSGLKVLTNKAS-VML-FMKGNKQEAKCGFSKQILEILNST----GVEYETFDILE-DEEVRQGLKTFSNWPTYPQLY 75 (109)
T ss_dssp CCCHHHHHTTSS-EEE-EESSTTTCCCSSTHHHHHHHHHHT----CSCEEEEESSS-CHHHHHHHHHHHSCCSSCEEE
T ss_pred HHHHHHHhccCC-EEE-EEecCCCCCCCchHHHHHHHHHHc----CCCeEEEECCC-CHHHHHHHHHHhCCCCCCEEE
Confidence 356888886665 333 44311 8999996555555444 46688888861 111123566677888 99863
No 266
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=96.45 E-value=0.0058 Score=48.93 Aligned_cols=73 Identities=8% Similarity=0.042 Sum_probs=46.8
Q ss_pred cCCeEEEEEEecCCCCC-Cc----HHHHHHHHHcc-CCCCcEEEEEeccc-CCCcc-cHHHHhhcCccCceEEEec--cc
Q psy3889 37 KFHTTLVKFDIAYPYGA-KH----EAFLEVAESSK-HQPDFLVAEVGVKD-YGERD-NEDLAKRGCLTPQLLWAFC--VA 106 (243)
Q Consensus 37 ~~k~vlV~FyA~~pWC~-~c----p~~~~lA~~~~-~~~~v~vakVd~~d-~~~~~-n~~l~~~~~V~~PTi~lF~--~~ 106 (243)
++++|||.||. +||+ .| +.+.++.+.++ ...++.+.-|.+|- .|..+ -++.+++|++.+|.+.+.. +.
T Consensus 31 ~Gk~vll~F~~--t~Cp~~Cp~~~~~l~~l~~~~~~~~~~v~~v~isvDp~~Dtp~~l~~y~~~~~~~~~~~~~ltg~~~ 108 (170)
T 4hde_A 31 KGKVWVADFMF--TNCQTVCPPMTANMAKLQKMAKEEKLDVQFVSFSVDPDLDKPENLKAFIQKFTEDTSNWNLLTGYSL 108 (170)
T ss_dssp TTSCEEEEEEC--TTCSSSHHHHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCHHHHHHHHTTTCSCCTTEEEEBCSCH
T ss_pred CCCEEEEEEEC--CCCCCcccHHHHHHHHHHHhhhcccccceeEeeecCcccccHHHHHHHHHHcCCCCCCceecCcccH
Confidence 67899999999 9996 69 56666666663 23468888887751 11111 2466778887766555443 44
Q ss_pred hHhhh
Q psy3889 107 DSLNK 111 (243)
Q Consensus 107 ~~l~~ 111 (243)
+++.+
T Consensus 109 ~~~~~ 113 (170)
T 4hde_A 109 EDITK 113 (170)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 45544
No 267
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=96.30 E-value=0.0022 Score=54.69 Aligned_cols=57 Identities=4% Similarity=0.048 Sum_probs=40.4
Q ss_pred CeEEEEEE-ecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHh------hc--CccCceE
Q psy3889 39 HTTLVKFD-IAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAK------RG--CLTPQLL 100 (243)
Q Consensus 39 k~vlV~Fy-A~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~------~~--~V~~PTi 100 (243)
+++++.|| + .||+.| |.+.++.++|+. .++.+.-|.+|+ .......++ .+ +++||.+
T Consensus 30 ~~vvL~f~pa--~~cpvC~~el~~l~~l~~ef~~-~~v~vigIS~D~--~~~~~~~~~~i~~~~~~~~~~~fpil 99 (233)
T 2v2g_A 30 SWGVLFSHPR--DFTPVSTTELGRVIQLEGDFKK-RGVKLIALSCDN--VADHKEWSEDVKCLSGVKGDMPYPII 99 (233)
T ss_dssp SEEEEEECSC--SSCHHHHHHHHHHHHTHHHHHH-TTEEEEEEESSC--HHHHHHHHHHHHHHHTCCSSCSSCEE
T ss_pred CeEEEEEECC--CCCCCcHHHHHHHHHHHHHHHH-cCCEEEEEcCCC--HHHHHHHHHHHHHhhCcccCCceEEE
Confidence 48899898 7 999999 788888888853 478899998862 112344555 45 5558854
No 268
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=96.27 E-value=0.026 Score=47.88 Aligned_cols=75 Identities=13% Similarity=-0.072 Sum_probs=56.5
Q ss_pred CCceEcChhhHHHHhccCCeEEEEEEecCCCCCCc--------HHHHHHHHHccC-CCCcEEEEEecccCCCcccHHHHh
Q psy3889 21 KGHVSLDTHNFDKILSKFHTTLVKFDIAYPYGAKH--------EAFLEVAESSKH-QPDFLVAEVGVKDYGERDNEDLAK 91 (243)
Q Consensus 21 ~~v~~L~~~nF~~~v~~~k~vlV~FyA~~pWC~~c--------p~~~~lA~~~~~-~~~v~vakVd~~d~~~~~n~~l~~ 91 (243)
..|.++|.+|+..+ .+.+.+|.|+. +-+..+ ..+.++|+.+++ ..++.|+-+|++ .+..+++
T Consensus 114 Plv~e~t~~n~~~~--~~~~~~v~~~~--~~~~~~~~~~~~~~~~~~~vA~~~~~k~~~~~F~~~d~~-----~~~~~~~ 184 (252)
T 2h8l_A 114 GICPHMTEDNKDLI--QGKDLLIAYYD--VDYEKNAKGSNYWRNRVMMVAKKFLDAGHKLNFAVASRK-----TFSHELS 184 (252)
T ss_dssp CSSCEECTTTHHHH--SSSSEEEEEEC--CBTTTBHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEETT-----TTHHHHG
T ss_pred CCeeecccccHhhh--cCCCeEEEEee--cchhhcchhHHHHHHHHHHHHHHccccCceEEEEEEchH-----HHHHHHH
Confidence 56899999999986 33456677775 433222 567779999865 345999999997 6777899
Q ss_pred hcCc----c-CceEEEec
Q psy3889 92 RGCL----T-PQLLWAFC 104 (243)
Q Consensus 92 ~~~V----~-~PTi~lF~ 104 (243)
.||+ . +|++.++.
T Consensus 185 ~fgl~~~~~~~P~v~i~~ 202 (252)
T 2h8l_A 185 DFGLESTAGEIPVVAIRT 202 (252)
T ss_dssp GGTCCCCSCSSCEEEEEC
T ss_pred HcCCCCccCCCCEEEEEe
Confidence 9999 4 99999884
No 269
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=96.13 E-value=0.0024 Score=53.76 Aligned_cols=37 Identities=5% Similarity=-0.006 Sum_probs=28.8
Q ss_pred eEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecc
Q psy3889 40 TTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVK 79 (243)
Q Consensus 40 ~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~ 79 (243)
.||+.|++ .||+.| |.+.++.++|+. .++.+.-|.+|
T Consensus 34 vvL~f~~a--~~cp~C~~el~~l~~l~~~f~~-~~v~vi~vS~D 74 (220)
T 1xcc_A 34 AILFSHPN--DFTPVCTTELAELGKMHEDFLK-LNCKLIGFSCN 74 (220)
T ss_dssp EEEECCSC--TTCHHHHHHHHHHHHTHHHHHT-TTEEEEEEESS
T ss_pred EEEEEECC--CCCCCCHHHHHHHHHHHHHHHH-cCCEEEEEeCC
Confidence 45555578 999999 788888888853 57889999886
No 270
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=96.09 E-value=0.0016 Score=53.26 Aligned_cols=38 Identities=11% Similarity=0.030 Sum_probs=29.0
Q ss_pred CCeEEEEEEecCCCCCCc----HHH---HHHHHHccCCCCcEEEEEecc
Q psy3889 38 FHTTLVKFDIAYPYGAKH----EAF---LEVAESSKHQPDFLVAEVGVK 79 (243)
Q Consensus 38 ~k~vlV~FyA~~pWC~~c----p~~---~~lA~~~~~~~~v~vakVd~~ 79 (243)
.++++|+|++ +||||| |.+ .++.+.+. +++.+..+++.
T Consensus 14 ~~~~vvef~d--~~Cp~C~~~~~~~~~~~~~~~~~~--~~v~~~~~~~~ 58 (189)
T 3l9v_A 14 DAPAVVEFFS--FYCPPCYAFSQTMGVDQAIRHVLP--QGSRMVKYHVS 58 (189)
T ss_dssp TCCSEEEEEC--TTCHHHHHHHHTSCHHHHHHTTCC--TTCCEEEEECS
T ss_pred CCCEEEEEEC--CCChhHHHHhHhccchHHHHHhCC--CCCEEEEEech
Confidence 4689999999 999999 543 45655553 37888888884
No 271
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=96.05 E-value=0.0046 Score=47.95 Aligned_cols=68 Identities=15% Similarity=0.205 Sum_probs=39.7
Q ss_pred hhHHHHhccCCeEEEEEEecCCCCCCcHHHHHHHHHcc-CCCCcEEEEEecccCCC-cc-cHHHHhhcCcc-CceEEE
Q psy3889 29 HNFDKILSKFHTTLVKFDIAYPYGAKHEAFLEVAESSK-HQPDFLVAEVGVKDYGE-RD-NEDLAKRGCLT-PQLLWA 102 (243)
Q Consensus 29 ~nF~~~v~~~k~vlV~FyA~~pWC~~cp~~~~lA~~~~-~~~~v~vakVd~~d~~~-~~-n~~l~~~~~V~-~PTi~l 102 (243)
.+|+++++..+ +|.|.. |||++|..-.++-+... -...+.+..||.+ ++ .+ ...+.+..|.+ +|++.+
T Consensus 5 ~~~~~ii~~~~--Vvvysk--~~Cp~C~~ak~lL~~~~~~~v~~~~idid~~--~d~~~~~~~l~~~~G~~tVP~IfI 76 (127)
T 3l4n_A 5 KEYSLILDLSP--IIIFSK--STCSYSKGMKELLENEYQFIPNYYIIELDKH--GHGEELQEYIKLVTGRGTVPNLLV 76 (127)
T ss_dssp HHHHHHHTSCS--EEEEEC--TTCHHHHHHHHHHHHHEEEESCCEEEEGGGS--TTHHHHHHHHHHHHSCCSSCEEEE
T ss_pred HHHHHHHccCC--EEEEEc--CCCccHHHHHHHHHHhcccCCCcEEEEecCC--CCHHHHHHHHHHHcCCCCcceEEE
Confidence 57888887665 556999 99999955555544421 1123444444432 11 11 23355556888 999953
No 272
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=95.91 E-value=0.04 Score=46.14 Aligned_cols=71 Identities=11% Similarity=0.022 Sum_probs=52.1
Q ss_pred ceEcChhhHHHHh--ccCCeEEEEEEecCCCCCCcHHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhcCcc-Cce
Q psy3889 23 HVSLDTHNFDKIL--SKFHTTLVKFDIAYPYGAKHEAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRGCLT-PQL 99 (243)
Q Consensus 23 v~~L~~~nF~~~v--~~~k~vlV~FyA~~pWC~~cp~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~~V~-~PT 99 (243)
+...+..+++..+ +..+++.+-|.. . .|+....++..+...+.+.+..++- .+.+++++|||+ +||
T Consensus 140 l~~~~~~~l~~~~~~~~~~~~al~f~~--~---~~~~~~~~~~d~~~~~~i~v~~~~~------~~~~l~~~f~v~~~Ps 208 (244)
T 3q6o_A 140 LEPAXLEEIDGFFARNNEEYLALIFEX--G---GSYLAREVALDLSQHKGVAVRRVLN------TEANVVRKFGVTDFPS 208 (244)
T ss_dssp CSCCCHHHHHTHHHHCCCSEEEEEEEC--T---TCCHHHHHHHHTTTCTTEEEEEEET------TCHHHHHHHTCCCSSE
T ss_pred cccccHHHHHHHhhcCCCceEEEEEEE--C---CcchHHHHHHHhccCCceEEEEEeC------chHHHHHHcCCCCCCe
Confidence 4556778888876 444566666665 2 3667777777776667788877753 458999999999 999
Q ss_pred EEEec
Q psy3889 100 LWAFC 104 (243)
Q Consensus 100 i~lF~ 104 (243)
+++|.
T Consensus 209 lvl~~ 213 (244)
T 3q6o_A 209 CYLLF 213 (244)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 98886
No 273
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=95.87 E-value=0.0028 Score=51.69 Aligned_cols=36 Identities=0% Similarity=-0.078 Sum_probs=30.4
Q ss_pred CCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecc
Q psy3889 38 FHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVK 79 (243)
Q Consensus 38 ~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~ 79 (243)
+++++|+|++ .||||| |.+.++.+.+ ++.+.++.+.
T Consensus 22 ~~~~vvef~d--~~Cp~C~~~~~~~~~~~~~~----~v~~~~~p~~ 61 (185)
T 3feu_A 22 GMAPVTEVFA--LSCGHCRNMENFLPVISQEA----GTDIGKMHIT 61 (185)
T ss_dssp CCCSEEEEEC--TTCHHHHHHGGGHHHHHHHH----TSCCEEEECC
T ss_pred CCCEEEEEEC--CCChhHHHhhHHHHHHHHHh----CCeEEEEecc
Confidence 5789999999 999999 8888888877 4677777763
No 274
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.57 E-value=0.042 Score=44.91 Aligned_cols=71 Identities=7% Similarity=0.039 Sum_probs=48.6
Q ss_pred ChhhHHHHh--------ccCCeEEEEEEecCCCCCCcHHHH-------HHHHHccCCCCcEEEEEecccCCCccc-----
Q psy3889 27 DTHNFDKIL--------SKFHTTLVKFDIAYPYGAKHEAFL-------EVAESSKHQPDFLVAEVGVKDYGERDN----- 86 (243)
Q Consensus 27 ~~~nF~~~v--------~~~k~vlV~FyA~~pWC~~cp~~~-------~lA~~~~~~~~v~vakVd~~d~~~~~n----- 86 (243)
-..+|++.+ ...|+++|.+++ |||..|..|. .+.+-+.. ++++...|+++ .++
T Consensus 36 ~~gs~~~Al~~A~~~~k~e~K~LlVyLhs--~~~~~~~~f~~~~L~~~~V~~~l~~--nfV~w~~dv~~---~e~~~~~~ 108 (178)
T 2ec4_A 36 FIGSLEAAFQEAFYVKARDRKLLAIYLHH--DESVLTNVFCSQMLCAESIVSYLSQ--NFITWAWDLTK---DSNRARFL 108 (178)
T ss_dssp CCSCHHHHHHTTTSSCTTTCCEEEEEEEC--SSCSHHHHHHHHTTTCHHHHHHHHH--TEEEEEEECCS---HHHHHHHH
T ss_pred eeCCHHHHHHHHHhhhhhhCcEEEEEEeC--CCCccHHHHHHHhcCCHHHHHHHHc--CEEEEEEeCCC---chhhhhhh
Confidence 355676655 247899999999 9999985554 23333332 78999999862 121
Q ss_pred --------HHHHh---hcCcc-CceEEEec
Q psy3889 87 --------EDLAK---RGCLT-PQLLWAFC 104 (243)
Q Consensus 87 --------~~l~~---~~~V~-~PTi~lF~ 104 (243)
..++. .|++. ||++.+..
T Consensus 109 ~~~~~~~g~~~a~~~~~~~~~~~P~l~ii~ 138 (178)
T 2ec4_A 109 TMCNRHFGSVVAQTIRTQKTDQFPLFLIIM 138 (178)
T ss_dssp HHHHHHTCHHHHHHHHHSCSTTCSEEEEEC
T ss_pred hhhhhhhHHHHHHHHhhcCCCCCCeEEEEE
Confidence 13444 38999 99999885
No 275
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=95.53 E-value=0.02 Score=46.18 Aligned_cols=38 Identities=11% Similarity=0.071 Sum_probs=31.4
Q ss_pred cCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEec
Q psy3889 37 KFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGV 78 (243)
Q Consensus 37 ~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~ 78 (243)
..+.+++.|+. +||++| |.+.++.+.+.. ++.+..+.+
T Consensus 21 ~~~~~i~~f~d--~~Cp~C~~~~~~l~~l~~~~~~--~v~~~~~p~ 62 (195)
T 2znm_A 21 SGKIEVLEFFG--YFCVHCHHFDPLLLKLGKALPS--DAYLRTEHV 62 (195)
T ss_dssp SSSEEEEEEEC--TTSCCTTSSCHHHHHHHHHSCT--TEEEEEEEC
T ss_pred CCCcEEEEEEC--CCChhHHHHhHHHHHHHHHCCC--ceEEEEecc
Confidence 46789999999 999999 999999888743 677777765
No 276
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=95.46 E-value=0.014 Score=49.59 Aligned_cols=58 Identities=14% Similarity=0.091 Sum_probs=40.2
Q ss_pred cCCeEEEEEEecCCC-CCCcH------HHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhcCcc-CceEE
Q psy3889 37 KFHTTLVKFDIAYPY-GAKHE------AFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRGCLT-PQLLW 101 (243)
Q Consensus 37 ~~k~vlV~FyA~~pW-C~~cp------~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~~V~-~PTi~ 101 (243)
.+++|+|.||. .| |+.|+ ....+.+.+ .++.|.-|++|+ ......+++++++. ||.+.
T Consensus 47 ~Gk~vVL~F~p--s~~cp~C~~~~~~~El~~~~~~~---~gv~VvgIS~Ds--~~~~~~f~~~~gl~~fplLs 112 (224)
T 3keb_A 47 SHTPKLIVTLL--SVDEDEHAGLLLLRETRRFLDSW---PHLKLIVITVDS--PSSLARARHEHGLPNIALLS 112 (224)
T ss_dssp TTCCEEEEECS--CTTCSTTTSHHHHHHHHHHHTTC---TTSEEEEEESSC--HHHHHHHHHHHCCTTCEEEE
T ss_pred CCCcEEEEEEe--CCCCCCCCCCccHHHHHHHHHHc---CCCEEEEEECCC--HHHHHHHHHHcCCCCceEEE
Confidence 46789999998 88 89996 233343333 468888888862 22356788888886 77665
No 277
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=95.29 E-value=0.014 Score=47.85 Aligned_cols=67 Identities=9% Similarity=0.056 Sum_probs=45.4
Q ss_pred hHHHHhccCCeEEEEEEecCCCCCCc-----HHHHHHHHHccCCCCc-EEEEEecccCCCcccHHHHhhcCcc--CceEE
Q psy3889 30 NFDKILSKFHTTLVKFDIAYPYGAKH-----EAFLEVAESSKHQPDF-LVAEVGVKDYGERDNEDLAKRGCLT--PQLLW 101 (243)
Q Consensus 30 nF~~~v~~~k~vlV~FyA~~pWC~~c-----p~~~~lA~~~~~~~~v-~vakVd~~d~~~~~n~~l~~~~~V~--~PTi~ 101 (243)
++.+...+.+.||+.|++ .||+.| |.|.+...+|+. .++ .+.-|.+|+ ......+++++++. ||.+-
T Consensus 40 sLsd~~~Gk~vVL~fyP~--~~tp~Ct~~El~~f~~~~~ef~~-~g~d~VigIS~D~--~~~~~~f~~~~~l~~~f~lLs 114 (176)
T 4f82_A 40 SVRDQVAGKRVVIFGLPG--AFTPTCSAQHVPGYVEHAEQLRA-AGIDEIWCVSVND--AFVMGAWGRDLHTAGKVRMMA 114 (176)
T ss_dssp EHHHHHTTCEEEEEEESC--TTCHHHHHTHHHHHHHHHHHHHH-TTCCEEEEEESSC--HHHHHHHHHHTTCTTTSEEEE
T ss_pred eHHHHhCCCeEEEEEEcC--CCCCCCCHHHHHHHHHHHHHHHh-CCCCEEEEEeCCC--HHHHHHHHHHhCCCCCceEEE
Confidence 455554343355666667 999999 568888888853 356 777788762 22457788888887 77654
No 278
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=95.00 E-value=0.29 Score=42.64 Aligned_cols=104 Identities=13% Similarity=0.133 Sum_probs=63.7
Q ss_pred cCCCceEc-ChhhHHHHhcc-CCeEEEEEEecCCCCCCcHHHHHHHHHccCCCCcEEEEEecccCCCccc-HHHHhhc-C
Q psy3889 19 LSKGHVSL-DTHNFDKILSK-FHTTLVKFDIAYPYGAKHEAFLEVAESSKHQPDFLVAEVGVKDYGERDN-EDLAKRG-C 94 (243)
Q Consensus 19 ~~~~v~~L-~~~nF~~~v~~-~k~vlV~FyA~~pWC~~cp~~~~lA~~~~~~~~v~vakVd~~d~~~~~n-~~l~~~~-~ 94 (243)
....+..+ +.+++++.++. .+++++-| . .-....+.|..+|..+.+ .+.|+.++-.+.....+ ..+..+| +
T Consensus 141 ~~~~v~~i~~~~~l~~~l~~~~~~~vi~f-s--~~~~~~~~f~~~A~~~~~--~~~F~~v~~~~~a~~~~~~~~~~~~p~ 215 (298)
T 3ed3_A 141 IRSYVKKFVRIDTLGSLLRKSPKLSVVLF-S--KQDKISPVYKSIALDWLG--KFDFYSISNKKLKQLTDMNPTYEKTPE 215 (298)
T ss_dssp CCCCEEECSCGGGHHHHHTSCSSEEEEEE-E--SSSSCCHHHHHHHHHTBT--TEEEEEEEGGGCCCCCTTCTTSTTCHH
T ss_pred cccccEEcCCHHHHHHHHhcCCceEEEEE-c--CCCcchHHHHHHHHHhhc--CcEEEEEcchHhhhhhhhhhhcccCcc
Confidence 34567778 45789998855 45555554 5 544455999999999964 89999997542110000 1111111 2
Q ss_pred c-------------c-CceEEEec--------------cchHhhhhhhHHHHhhhhcccccCcCccch
Q psy3889 95 L-------------T-PQLLWAFC--------------VADSLNKTLFILIIFFSSIGIWIGAVGCLQ 134 (243)
Q Consensus 95 V-------------~-~PTi~lF~--------------~~~~l~~~~f~~~~i~~~~g~~~~~~G~i~ 134 (243)
| . +|++.+|+ +.++|.+ | |.++.+. .+.-|.+.
T Consensus 216 i~~~~~~~~~~~~~~~~P~lv~~~~~~~~~~~y~g~~~~~~~i~~--f----i~~~~~~-~p~~~~ls 276 (298)
T 3ed3_A 216 IFKYLQKVIPEQRQSDKSKLVVFDADKDKFWEYEGNSINKNDISK--F----LRDTFSI-TPNEGPFS 276 (298)
T ss_dssp HHHHHHHHHHHHTTCSSCEEEEEETTTTEEEECCCSSCCHHHHHH--H----HHHHHTC-CCSSSTTS
T ss_pred hhhhhhcccccccccCCCeEEEEcCCCCceEEeccccCCHHHHHH--H----HHhhcCC-CCCcCCCc
Confidence 3 6 99999997 5678888 8 7654332 24444443
No 279
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=94.40 E-value=0.067 Score=38.25 Aligned_cols=54 Identities=7% Similarity=0.122 Sum_probs=33.6
Q ss_pred EEEEEecCCCCCCcH------HHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhcC--cc-CceEEE
Q psy3889 42 LVKFDIAYPYGAKHE------AFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRGC--LT-PQLLWA 102 (243)
Q Consensus 42 lV~FyA~~pWC~~cp------~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~~--V~-~PTi~l 102 (243)
++-|+. |||+.|. .-.++-+. ..+.+-.+|++. +.....++.+.+| .. +|++.+
T Consensus 4 v~ly~~--~~C~~c~~~~~~~~ak~~L~~----~~i~~~~~di~~-~~~~~~~l~~~~g~~~~~vP~ifi 66 (93)
T 1t1v_A 4 LRVYST--SVTGSREIKSQQSEVTRILDG----KRIQYQLVDISQ-DNALRDEMRTLAGNPKATPPQIVN 66 (93)
T ss_dssp EEEEEC--SSCSCHHHHHHHHHHHHHHHH----TTCCCEEEETTS-CHHHHHHHHHHTTCTTCCSCEEEE
T ss_pred EEEEEc--CCCCCchhhHHHHHHHHHHHH----CCCceEEEECCC-CHHHHHHHHHHhCCCCCCCCEEEE
Confidence 455888 9999994 33333332 246677888851 1112245667788 77 999853
No 280
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=94.29 E-value=0.081 Score=41.66 Aligned_cols=19 Identities=11% Similarity=-0.015 Sum_probs=16.3
Q ss_pred ccCCeEEEEEEecCCCCCCcH
Q psy3889 36 SKFHTTLVKFDIAYPYGAKHE 56 (243)
Q Consensus 36 ~~~k~vlV~FyA~~pWC~~cp 56 (243)
...+.++|.|+. |+|++|-
T Consensus 12 ~~a~~~vv~f~D--~~Cp~C~ 30 (147)
T 3gv1_A 12 GNGKLKVAVFSD--PDCPFCK 30 (147)
T ss_dssp TTCCEEEEEEEC--TTCHHHH
T ss_pred CCCCEEEEEEEC--CCChhHH
Confidence 356799999999 9999993
No 281
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=94.29 E-value=0.031 Score=44.20 Aligned_cols=40 Identities=10% Similarity=-0.125 Sum_probs=29.5
Q ss_pred cCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEec
Q psy3889 37 KFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGV 78 (243)
Q Consensus 37 ~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~ 78 (243)
..+.+++.|+. +|||+| |.+.++.+.+...++|.+.-.+.
T Consensus 26 ~a~v~i~~f~D--~~Cp~C~~~~~~~~~~~~~~~~~~~v~~~~~~~ 69 (175)
T 1z6m_A 26 NAPVKMIEFIN--VRCPYCRKWFEESEELLAQSVKSGKVERIIKLF 69 (175)
T ss_dssp TCSEEEEEEEC--TTCHHHHHHHHHHHHHHHHHHHTTSEEEEEEEC
T ss_pred CCCeEEEEEEC--CCCcchHHHHHHHHHHHHHHhhCCcEEEEEEeC
Confidence 45678999999 999999 66667777763234677766655
No 282
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=93.92 E-value=0.11 Score=38.70 Aligned_cols=55 Identities=13% Similarity=0.098 Sum_probs=34.2
Q ss_pred EEEEEEecCCCCCCcHH------HHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhc--------Ccc-CceEEE
Q psy3889 41 TLVKFDIAYPYGAKHEA------FLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRG--------CLT-PQLLWA 102 (243)
Q Consensus 41 vlV~FyA~~pWC~~cp~------~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~--------~V~-~PTi~l 102 (243)
.++.|+. |||++|.. -.++-+. ..+.+-.+|++. +.....++.+++ +.. +|+|++
T Consensus 9 ~V~vy~~--~~C~~C~~~~~~~~ak~~L~~----~gi~y~~vdI~~-~~~~~~~l~~~~~~~~~~~~g~~tvP~vfi 78 (111)
T 2ct6_A 9 VIRVFIA--SSSGFVAIKKKQQDVVRFLEA----NKIEFEEVDITM-SEEQRQWMYKNVPPEKKPTQGNPLPPQIFN 78 (111)
T ss_dssp CEEEEEC--SSCSCHHHHHHHHHHHHHHHH----TTCCEEEEETTT-CHHHHHHHHHSCCTTTCCSSSSCCSCEEEE
T ss_pred EEEEEEc--CCCCCcccchhHHHHHHHHHH----cCCCEEEEECCC-CHHHHHHHHHHhcccccccCCCCCCCEEEE
Confidence 3566888 99999974 3333332 256788888862 111123466665 777 998853
No 283
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=93.89 E-value=0.05 Score=43.58 Aligned_cols=38 Identities=8% Similarity=-0.130 Sum_probs=29.3
Q ss_pred cCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEec
Q psy3889 37 KFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGV 78 (243)
Q Consensus 37 ~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~ 78 (243)
..+.+++.|+. +|||+| |.+.++.+.+. .+|.+..+.+
T Consensus 24 ~a~v~i~~f~d--~~Cp~C~~~~~~l~~l~~~~~--~~v~~~~~p~ 65 (193)
T 2rem_A 24 AGKIEVVEIFG--YTCPHCAHFDSKLQAWGARQA--KDVRFTLVPA 65 (193)
T ss_dssp TTCEEEEEEEC--TTCHHHHHHHHHHHHHHHTSC--TTEEEEEEEC
T ss_pred CCCeEEEEEEC--CCChhHhhhhHHHHHHHHhcC--CceEEEEeCc
Confidence 35679999999 999999 77777777764 2677766665
No 284
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=93.86 E-value=0.14 Score=48.51 Aligned_cols=72 Identities=14% Similarity=0.022 Sum_probs=54.9
Q ss_pred CceEcChhhHHHHh--ccCCeEEEEEEecCCCCCCcHHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhcCcc-Cc
Q psy3889 22 GHVSLDTHNFDKIL--SKFHTTLVKFDIAYPYGAKHEAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRGCLT-PQ 98 (243)
Q Consensus 22 ~v~~L~~~nF~~~v--~~~k~vlV~FyA~~pWC~~cp~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~~V~-~P 98 (243)
.+..++..+++.++ ...+++++-|+. . ..+....++..+...+.+.|..|+- .+.+++++|||+ +|
T Consensus 139 ~l~~it~~~l~~~l~~~~~~~vallF~~--~---~s~~~~~~~ldl~~~~~v~v~~v~~------~~~~l~~kfgV~~~P 207 (519)
T 3t58_A 139 PLEPAKLNDIDGFFTRNKADYLALVFER--E---DSYLGREVTLDLSQYHAVAVRRVLN------TESDLVNKFGVTDFP 207 (519)
T ss_dssp CCSBCCHHHHTTGGGSCCCSEEEEEEEC--T---TCCHHHHHHHHTTTCTTEEEEEEET------TCHHHHHHHTCCCSS
T ss_pred ccCcCCHHHHHHHhccCCCCeEEEEecC--C---chHHHHHHHHHhhccCCeeEEEecC------chHHHHHHcCCCCCC
Confidence 35667888888877 345577777776 2 2457788888887667888877653 468999999999 99
Q ss_pred eEEEec
Q psy3889 99 LLWAFC 104 (243)
Q Consensus 99 Ti~lF~ 104 (243)
|+++|.
T Consensus 208 slvl~~ 213 (519)
T 3t58_A 208 SCYLLL 213 (519)
T ss_dssp EEEEEE
T ss_pred eEEEEe
Confidence 999996
No 285
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=93.85 E-value=0.053 Score=45.84 Aligned_cols=40 Identities=18% Similarity=0.114 Sum_probs=33.0
Q ss_pred cCCeEEEEEE-ecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecc
Q psy3889 37 KFHTTLVKFD-IAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVK 79 (243)
Q Consensus 37 ~~k~vlV~Fy-A~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~ 79 (243)
.+++|++.|| + .||+.| +.|.+...+|+ ..++.+.-|.+|
T Consensus 51 ~GK~vVL~FyP~--d~TpvCt~E~~~f~~~~~~f~-~~g~~vigiS~D 95 (216)
T 3sbc_A 51 KGKYVVLAFIPL--AFTFVSPTEIIAFSEAAKKFE-EQGAQVLFASTD 95 (216)
T ss_dssp TTSEEEEEECSC--TTSSHHHHHHHHHHHHHHHHH-HTTEEEEEEESS
T ss_pred CCCeEEEEEEcC--CCCCcCchhhhHHHHhHHhhc-cCCceEEEeecC
Confidence 4689999999 6 899999 78888888885 347888889886
No 286
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=92.95 E-value=0.086 Score=41.08 Aligned_cols=65 Identities=12% Similarity=0.112 Sum_probs=37.9
Q ss_pred hhHHHHhccCCeEEEEEEecC----CCCCCcHHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhcCcc-CceEE
Q psy3889 29 HNFDKILSKFHTTLVKFDIAY----PYGAKHEAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRGCLT-PQLLW 101 (243)
Q Consensus 29 ~nF~~~v~~~k~vlV~FyA~~----pWC~~cp~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~~V~-~PTi~ 101 (243)
+.+++.+...+. +| |... |||++|..-.++-+.. .+.+..+|++. +......+....|.. +|+++
T Consensus 26 ~~v~~~i~~~~V-vv--y~ks~~~~~~Cp~C~~ak~~L~~~----gv~y~~vdI~~-d~~~~~~L~~~~G~~tvP~Vf 95 (135)
T 2wci_A 26 EKIQRQIAENPI-LL--YMKGSPKLPSCGFSAQAVQALAAC----GERFAYVDILQ-NPDIRAELPKYANWPTFPQLW 95 (135)
T ss_dssp HHHHHHHHHCSE-EE--EESBCSSSBSSHHHHHHHHHHHTT----CSCCEEEEGGG-CHHHHHHHHHHHTCCSSCEEE
T ss_pred HHHHHHhccCCE-EE--EEEecCCCCCCccHHHHHHHHHHc----CCceEEEECCC-CHHHHHHHHHHHCCCCcCEEE
Confidence 455566655543 32 4311 6999996555555443 45577888861 111124555566888 99874
No 287
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=92.84 E-value=0.042 Score=44.88 Aligned_cols=38 Identities=13% Similarity=0.075 Sum_probs=28.7
Q ss_pred CCeEEEEEEecCCCCCCc----HHH---HHHHHHccCCCCcEEEEEecc
Q psy3889 38 FHTTLVKFDIAYPYGAKH----EAF---LEVAESSKHQPDFLVAEVGVK 79 (243)
Q Consensus 38 ~k~vlV~FyA~~pWC~~c----p~~---~~lA~~~~~~~~v~vakVd~~ 79 (243)
+++++|+|+. .||||| |.+ .++.+.+.. ++.+..++..
T Consensus 21 ~~~~vvef~d--~~Cp~C~~~~~~l~~~~~l~~~~~~--~v~~~~~~~~ 65 (191)
T 3l9s_A 21 GEPQVLEFFS--FYCPHCYQFEEVLHVSDNVKKKLPE--GTKMTKYHVE 65 (191)
T ss_dssp SSSCEEEEEC--TTCHHHHHHHHTSCHHHHHHHHSCT--TCCEEEEECS
T ss_pred CCCeEEEEEC--CCChhHHHhChhccchHHHHHhCCC--CcEEEEEecc
Confidence 4789999999 999999 543 577777743 5777777663
No 288
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=92.36 E-value=0.098 Score=46.45 Aligned_cols=59 Identities=12% Similarity=0.029 Sum_probs=36.0
Q ss_pred cCCeEEEEEEecCCCCCCcH-HHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhcCccCceE
Q psy3889 37 KFHTTLVKFDIAYPYGAKHE-AFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRGCLTPQLL 100 (243)
Q Consensus 37 ~~k~vlV~FyA~~pWC~~cp-~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~~V~~PTi 100 (243)
.+++|++.|| +..||+.|+ ....+.+. ...++.+.-|++|. ......++++++++||.+
T Consensus 23 ~Gk~vvl~F~-p~~~tp~C~~e~~~~~~~--~~~~~~v~gis~D~--~~~~~~f~~~~~l~fp~l 82 (322)
T 4eo3_A 23 YGKYTILFFF-PKAGTSGSTREAVEFSRE--NFEKAQVVGISRDS--VEALKRFKEKNDLKVTLL 82 (322)
T ss_dssp TTSEEEEEEC-SSTTSHHHHHHHHHHHHS--CCTTEEEEEEESCC--HHHHHHHHHHHTCCSEEE
T ss_pred CCCeEEEEEE-CCCCCCCCHHHHHHHHHH--hhCCCEEEEEeCCC--HHHHHHHHHhhCCceEEE
Confidence 5789999998 125888892 33333322 23468888887751 223456677777666643
No 289
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=92.34 E-value=0.12 Score=41.87 Aligned_cols=61 Identities=11% Similarity=0.038 Sum_probs=42.7
Q ss_pred cCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcE-EEEEecccCCCcccHHHHhhcCcc--CceEE
Q psy3889 37 KFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFL-VAEVGVKDYGERDNEDLAKRGCLT--PQLLW 101 (243)
Q Consensus 37 ~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~-vakVd~~d~~~~~n~~l~~~~~V~--~PTi~ 101 (243)
.++++++-|| +..||+-| |.|.+...+|+. .++. |.-|.+|+ ......+++++++. ||.+-
T Consensus 41 ~gk~vVL~fy-P~~fTp~Ct~e~~~f~~~~~ef~~-~gv~~VigIS~D~--~~~~~~w~~~~~~~~~f~lLS 108 (171)
T 2xhf_A 41 RGRKGILFSV-VGAFVPGSNNHIPEYLSLYDKFKE-EGYHTIACIAVND--PFVMAAWGKTVDPEHKIRMLA 108 (171)
T ss_dssp TTSEEEEEEC-SCTTCTTTTSSHHHHHHTHHHHHH-TTCCEEEEEESSC--HHHHHHHHHHHCTTCCSEEEE
T ss_pred CCCeEEEEEE-CCCCCCcCHHHHHHHHHHHHHHHH-CCCCEEEEEeCCC--HHHHHHHHHhcCCCCCeEEEE
Confidence 4567777777 34599999 899999888853 3564 77888762 22356888888883 76554
No 290
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=92.31 E-value=0.22 Score=37.75 Aligned_cols=69 Identities=12% Similarity=0.081 Sum_probs=36.9
Q ss_pred hHHHHhccCCeEEEEEEec---CCCCCCcHHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhcCcc-CceEEE
Q psy3889 30 NFDKILSKFHTTLVKFDIA---YPYGAKHEAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRGCLT-PQLLWA 102 (243)
Q Consensus 30 nF~~~v~~~k~vlV~FyA~---~pWC~~cp~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~~V~-~PTi~l 102 (243)
-.++.|.+++.++ |... .|||++|-.-.++-+...- +.-.+..+|+++ +......+.+..|.. +|++++
T Consensus 8 ~v~~~i~~~~Vvv--fsk~t~~~p~Cp~C~~ak~lL~~~gv-~~~~~~~~dv~~-~~~~~~~l~~~sg~~tvP~vfI 80 (121)
T 3gx8_A 8 AIEDAIESAPVVL--FMKGTPEFPKCGFSRATIGLLGNQGV-DPAKFAAYNVLE-DPELREGIKEFSEWPTIPQLYV 80 (121)
T ss_dssp HHHHHHHSCSEEE--EESBCSSSBCTTHHHHHHHHHHHHTB-CGGGEEEEECTT-CHHHHHHHHHHHTCCSSCEEEE
T ss_pred HHHHHhccCCEEE--EEeccCCCCCCccHHHHHHHHHHcCC-CcceEEEEEecC-CHHHHHHHHHHhCCCCCCeEEE
Confidence 3555676666443 4431 1599999554445444421 111166677751 111224555666778 999853
No 291
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=92.28 E-value=0.16 Score=42.90 Aligned_cols=40 Identities=13% Similarity=0.077 Sum_probs=32.8
Q ss_pred cCCeEEEEEE-ecCCCCCCc----HHHHHHHHHccCCCCcEEEEEecc
Q psy3889 37 KFHTTLVKFD-IAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGVK 79 (243)
Q Consensus 37 ~~k~vlV~Fy-A~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~~ 79 (243)
.+++|++.|| + .||+.| ..|.+...+|+ ..++.+.-|.+|
T Consensus 55 ~GK~vVL~FyP~--d~TpvCt~E~~~f~~~~~eF~-~~g~~vigiS~D 99 (219)
T 3tue_A 55 KGKWVVLFFYPL--DFTFVCPTEVIAFSDSVSRFN-ELNCEVLACSID 99 (219)
T ss_dssp TTSEEEEEECSC--TTCSSCCHHHHHHHTTHHHHH-TTTEEEEEEESS
T ss_pred CCCEEEEEEecc--cCCCCCchhHhhHHHHHhhhc-cCCcEEEEeeCC
Confidence 5689999898 5 899999 68888888885 357889999886
No 292
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=92.09 E-value=0.17 Score=37.39 Aligned_cols=65 Identities=12% Similarity=0.237 Sum_probs=36.6
Q ss_pred hHHHHhccCCeEEEEEEec---CCCCCCcHHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhcCcc-CceEE
Q psy3889 30 NFDKILSKFHTTLVKFDIA---YPYGAKHEAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRGCLT-PQLLW 101 (243)
Q Consensus 30 nF~~~v~~~k~vlV~FyA~---~pWC~~cp~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~~V~-~PTi~ 101 (243)
..++.+.+++.++ |... +|||++|..-.++-+.. ++.+-.+|++. +......+.+..|.. +|++.
T Consensus 10 ~v~~~i~~~~Vvv--y~k~t~~~p~Cp~C~~ak~~L~~~----gi~~~~~dI~~-~~~~~~~l~~~~g~~tvP~if 78 (109)
T 3ipz_A 10 TLEKLVNSEKVVL--FMKGTRDFPMCGFSNTVVQILKNL----NVPFEDVNILE-NEMLRQGLKEYSNWPTFPQLY 78 (109)
T ss_dssp HHHHHHTSSSEEE--EESBCSSSBSSHHHHHHHHHHHHT----TCCCEEEEGGG-CHHHHHHHHHHHTCSSSCEEE
T ss_pred HHHHHHccCCEEE--EEecCCCCCCChhHHHHHHHHHHc----CCCcEEEECCC-CHHHHHHHHHHHCCCCCCeEE
Confidence 4455666655433 5441 25999995555554443 34566777751 111224555566878 99874
No 293
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=92.07 E-value=0.19 Score=37.54 Aligned_cols=66 Identities=12% Similarity=0.142 Sum_probs=36.7
Q ss_pred hHHHHhccCCeEEEEEEe---cCCCCCCcHHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhcCcc-CceEEE
Q psy3889 30 NFDKILSKFHTTLVKFDI---AYPYGAKHEAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRGCLT-PQLLWA 102 (243)
Q Consensus 30 nF~~~v~~~k~vlV~FyA---~~pWC~~cp~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~~V~-~PTi~l 102 (243)
-.++.+++++.|+ |.. .+|||++|-.-.++-+.. .+.+-.+|++. +......+.+..|.. +|++.+
T Consensus 8 ~v~~~i~~~~Vvl--f~kg~~~~~~Cp~C~~ak~~L~~~----gi~y~~~di~~-d~~~~~~l~~~~g~~tvP~ifi 77 (111)
T 3zyw_A 8 RLKKLTHAAPCML--FMKGTPQEPRCGFSKQMVEILHKH----NIQFSSFDIFS-DEEVRQGLKAYSSWPTYPQLYV 77 (111)
T ss_dssp HHHHHHTSSSEEE--EESBCSSSBSSHHHHHHHHHHHHT----TCCCEEEEGGG-CHHHHHHHHHHHTCCSSCEEEE
T ss_pred HHHHHHhcCCEEE--EEecCCCCCcchhHHHHHHHHHHc----CCCeEEEECcC-CHHHHHHHHHHHCCCCCCEEEE
Confidence 4455666654433 432 248999995444444443 34466778752 111123444555777 999853
No 294
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=91.98 E-value=0.64 Score=39.11 Aligned_cols=74 Identities=18% Similarity=0.021 Sum_probs=52.7
Q ss_pred CCCceEcChhhHHHHhccCCeEEEEEEecCCCCC---Cc-----HHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHh
Q psy3889 20 SKGHVSLDTHNFDKILSKFHTTLVKFDIAYPYGA---KH-----EAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAK 91 (243)
Q Consensus 20 ~~~v~~L~~~nF~~~v~~~k~vlV~FyA~~pWC~---~c-----p~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~ 91 (243)
..-|.++|.+|+..+.. +++.++.|+. -+++. .+ ..+.++|+.++ ++.|+-+|++ ++....+
T Consensus 115 ~Plv~e~t~~n~~~~~~-~~~l~~~~~~-~d~~~~~~~~~~~~~~~~~~vAk~~k---ki~F~~~d~~-----~~~~~l~ 184 (250)
T 3ec3_A 115 LPLVGHRKTSNDAKRYS-KRPLVVVYYS-VDFSFDYRTATQFWRNKVLEVAKDFP---EYTFAIADEE-----DYATEVK 184 (250)
T ss_dssp SCTEEEECTTTHHHHSC-SSSEEEEEEC-CCCSTTTHHHHHHHHHHHHHHHTTCT---TSEEEEEETT-----TTHHHHH
T ss_pred CCceeecCccchhhhhc-cCccEEEEEe-cccccccchhHHHHHHHHHHHHHhhc---ceeEEEEcHH-----HHHHHHH
Confidence 35689999999998774 5666666765 12331 11 67788888875 6999999986 5677788
Q ss_pred hcCcc---Cc-eEEEe
Q psy3889 92 RGCLT---PQ-LLWAF 103 (243)
Q Consensus 92 ~~~V~---~P-Ti~lF 103 (243)
.||+. +| .+.++
T Consensus 185 ~fgl~~~~~~p~~~~~ 200 (250)
T 3ec3_A 185 DLGLSESGGDVNAAIL 200 (250)
T ss_dssp HTTCSSCSCSCEEEEE
T ss_pred HcCCCccCCCcEEEEE
Confidence 99986 45 55555
No 295
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=91.81 E-value=0.2 Score=41.81 Aligned_cols=55 Identities=7% Similarity=0.024 Sum_probs=37.1
Q ss_pred CeEEEEEEecCCCCCCcHHHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhcCcc-CceEE
Q psy3889 39 HTTLVKFDIAYPYGAKHEAFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRGCLT-PQLLW 101 (243)
Q Consensus 39 k~vlV~FyA~~pWC~~cp~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~~V~-~PTi~ 101 (243)
...++.|.. |||++|..-.++-+.. .+.+-.+|++. +....++.+.++.. +|++.
T Consensus 169 ~~~i~ly~~--~~Cp~C~~a~~~L~~~----~i~~~~~~i~~--~~~~~~l~~~~g~~~vP~~~ 224 (241)
T 1nm3_A 169 QESISIFTK--PGCPFCAKAKQLLHDK----GLSFEEIILGH--DATIVSVRAVSGRTTVPQVF 224 (241)
T ss_dssp CCCEEEEEC--SSCHHHHHHHHHHHHH----TCCCEEEETTT--TCCHHHHHHHTCCSSSCEEE
T ss_pred cceEEEEEC--CCChHHHHHHHHHHHc----CCceEEEECCC--chHHHHHHHHhCCCCcCEEE
Confidence 345666888 9999996555555443 34455677752 12336788899999 99985
No 296
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=90.58 E-value=0.25 Score=37.41 Aligned_cols=66 Identities=12% Similarity=0.123 Sum_probs=36.2
Q ss_pred hhHHHHhccCCeEEEEEEec---CCCCCCcHHHHHHHHHccCCCCcE-EEEEecccCCCcccHHHHhhcCcc-CceEE
Q psy3889 29 HNFDKILSKFHTTLVKFDIA---YPYGAKHEAFLEVAESSKHQPDFL-VAEVGVKDYGERDNEDLAKRGCLT-PQLLW 101 (243)
Q Consensus 29 ~nF~~~v~~~k~vlV~FyA~---~pWC~~cp~~~~lA~~~~~~~~v~-vakVd~~d~~~~~n~~l~~~~~V~-~PTi~ 101 (243)
...++++.+++.|+ |... .|||++|-.-.++-+.. .+. +-.+|++. ++.....+.+..+.. +|+++
T Consensus 11 ~~v~~~i~~~~Vvv--fsk~t~~~p~Cp~C~~ak~lL~~~----gv~~~~~vdV~~-d~~~~~~l~~~tg~~tvP~vf 81 (118)
T 2wem_A 11 EQLDALVKKDKVVV--FLKGTPEQPQCGFSNAVVQILRLH----GVRDYAAYNVLD-DPELRQGIKDYSNWPTIPQVY 81 (118)
T ss_dssp HHHHHHHHHSSEEE--EESBCSSSBSSHHHHHHHHHHHHT----TCCCCEEEESSS-CHHHHHHHHHHHTCCSSCEEE
T ss_pred HHHHHHhccCCEEE--EEecCCCCCccHHHHHHHHHHHHc----CCCCCEEEEcCC-CHHHHHHHHHHhCCCCcCeEE
Confidence 44566676665433 5441 15999995555554443 342 55667641 111124455555777 99985
No 297
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=89.50 E-value=0.41 Score=38.95 Aligned_cols=61 Identities=10% Similarity=-0.045 Sum_probs=41.9
Q ss_pred cCCeEEEEEEecCCCCCCc-----HHHHHHHHHc-cCCCCc-EEEEEecccCCCcccHHHHhhcCcc-CceEE
Q psy3889 37 KFHTTLVKFDIAYPYGAKH-----EAFLEVAESS-KHQPDF-LVAEVGVKDYGERDNEDLAKRGCLT-PQLLW 101 (243)
Q Consensus 37 ~~k~vlV~FyA~~pWC~~c-----p~~~~lA~~~-~~~~~v-~vakVd~~d~~~~~n~~l~~~~~V~-~PTi~ 101 (243)
.++++++-|| +..||+-| |.|.+...+| +. .++ .|+-|.+|+ ...+..+++++++. ||.+-
T Consensus 42 ~gk~vVL~fy-P~~fTp~Ct~~e~~~f~~~~~~f~~~-~g~~~V~gvS~D~--~~~~~~~~~~~~~~~f~lLs 110 (182)
T 1xiy_A 42 NNKKILLISL-PGAFTPTCSTKMIPGYEEEYDYFIKE-NNFDDIYCITNND--IYVLKSWFKSMDIKKIKYIS 110 (182)
T ss_dssp TTCEEEEEEC-SCTTCHHHHHTHHHHHHHTHHHHHTT-SCCSEEEEEESSC--HHHHHHHHHHTTCCSSEEEE
T ss_pred CCCcEEEEEe-CCCCCCCCCHHHHHHHHHHHHHHHHh-CCCcEEEEEeCCC--HHHHHHHHHHcCCCCceEEE
Confidence 4567777777 34699999 5788888888 53 356 477777762 12357788888886 77654
No 298
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=89.32 E-value=0.37 Score=33.62 Aligned_cols=55 Identities=4% Similarity=0.006 Sum_probs=31.2
Q ss_pred EEEEEecCC----CCCCcHHHHHHHHHccCCCCcEEEEEeccc----CCCcccHHHHhhcCcc------CceEEE
Q psy3889 42 LVKFDIAYP----YGAKHEAFLEVAESSKHQPDFLVAEVGVKD----YGERDNEDLAKRGCLT------PQLLWA 102 (243)
Q Consensus 42 lV~FyA~~p----WC~~cp~~~~lA~~~~~~~~v~vakVd~~d----~~~~~n~~l~~~~~V~------~PTi~l 102 (243)
++-|+. + ||++|..-.++-+.. ++.+-.+|++. .+.....++.+..|.. +|++.+
T Consensus 2 v~iY~~--~~~~~~Cp~C~~ak~~L~~~----gi~y~~idI~~~~~~~~~~~~~~l~~~~g~~~~~~~tvP~v~i 70 (87)
T 1aba_A 2 FKVYGY--DSNIHKCGPCDNAKRLLTVK----KQPFEFINIMPEKGVFDDEKIAELLTKLGRDTQIGLTMPQVFA 70 (87)
T ss_dssp EEEEEC--CTTTSCCHHHHHHHHHHHHT----TCCEEEEESCSBTTBCCHHHHHHHHHHHTCSCCTTCCSCEEEC
T ss_pred EEEEEe--CCCCCcCccHHHHHHHHHHc----CCCEEEEEeeccccccCHHHHHHHHHHhCCCCCCCCccCEEEE
Confidence 345677 9 999995555554443 34566677641 1111224566665543 787754
No 299
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=88.27 E-value=0.43 Score=37.34 Aligned_cols=38 Identities=8% Similarity=-0.004 Sum_probs=27.4
Q ss_pred cCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEec
Q psy3889 37 KFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVGV 78 (243)
Q Consensus 37 ~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd~ 78 (243)
.+++++|+|+. ..|||| |.+.++.+.+.. ++.+..+..
T Consensus 20 ~~~~~vvEf~d--y~Cp~C~~~~~~~~~l~~~~~~--~~~~~~~~~ 61 (184)
T 4dvc_A 20 SSSPVVSEFFS--FYCPHCNTFEPIIAQLKQQLPE--GAKFQKNHV 61 (184)
T ss_dssp CSSCEEEEEEC--TTCHHHHHHHHHHHHHHHTSCT--TCEEEEEEC
T ss_pred CCCCEEEEEEC--CCCHhHHHHhHHHHHHHhhcCC--ceEEEEEec
Confidence 45789999999 999999 666677666643 455555443
No 300
>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A
Probab=87.95 E-value=0.63 Score=35.65 Aligned_cols=68 Identities=6% Similarity=-0.022 Sum_probs=42.0
Q ss_pred EEEEEEecCCCCCCcHHHHH--HHHHccCCCCcEEEEEecccCCCcccHHHHhhc--------Ccc-CceEEEec----c
Q psy3889 41 TLVKFDIAYPYGAKHEAFLE--VAESSKHQPDFLVAEVGVKDYGERDNEDLAKRG--------CLT-PQLLWAFC----V 105 (243)
Q Consensus 41 vlV~FyA~~pWC~~cp~~~~--lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~--------~V~-~PTi~lF~----~ 105 (243)
|++-|++ |+||.|-++.+ -|+.+=...+|.+-.+|++. ++..-.++.++. |.. +|.|++=. .
T Consensus 1 ~V~vYtt--~~c~~c~~kk~c~~aK~lL~~kgV~feEidI~~-d~~~r~eM~~~~~~~~~~~~G~~tvPQIFi~~~~iGG 77 (121)
T 1u6t_A 1 VIRVYIA--SSSGSTAIKKKQQDVLGFLEANKIGFEEKDIAA-NEENRKWMRENVPENSRPATGYPLPPQIFNESQYRGD 77 (121)
T ss_dssp CEEEEEC--TTCSCHHHHHHHHHHHHHHHHTTCCEEEEECTT-CHHHHHHHHHHSCGGGSCSSSSCCSCEEEETTEEEEE
T ss_pred CEEEEec--CCCCCccchHHHHHHHHHHHHCCCceEEEECCC-CHHHHHHHHHhccccccccCCCcCCCEEEECCEEEec
Confidence 4566777 99999965542 22222123478899999962 222235566777 777 99876433 4
Q ss_pred chHhhh
Q psy3889 106 ADSLNK 111 (243)
Q Consensus 106 ~~~l~~ 111 (243)
.++|..
T Consensus 78 ~Dd~~~ 83 (121)
T 1u6t_A 78 YDAFFE 83 (121)
T ss_dssp HHHHHH
T ss_pred hHHHHH
Confidence 555655
No 301
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=86.71 E-value=0.52 Score=37.35 Aligned_cols=37 Identities=19% Similarity=-0.020 Sum_probs=27.6
Q ss_pred CCeEEEEEEecCCCCCCc----HHH-HHHHHHccCCCCcEEEEEec
Q psy3889 38 FHTTLVKFDIAYPYGAKH----EAF-LEVAESSKHQPDFLVAEVGV 78 (243)
Q Consensus 38 ~k~vlV~FyA~~pWC~~c----p~~-~~lA~~~~~~~~v~vakVd~ 78 (243)
.+.++|.||. ++||+| |.+ .++.+.+. .++.+.-+..
T Consensus 17 ~~~~~ief~d--~~CP~C~~~~~~l~~~l~~~~~--~~v~~~~~~l 58 (195)
T 3c7m_A 17 ADKTLIKVFS--YACPFCYKYDKAVTGPVSEKVK--DIVAFTPFHL 58 (195)
T ss_dssp CTTEEEEEEC--TTCHHHHHHHHHTHHHHHHHTT--TTCEEEEEEC
T ss_pred CCcEEEEEEe--CcCcchhhCcHHHHHHHHHhCC--CceEEEEEec
Confidence 5678999999 999999 666 77777664 3566666655
No 302
>2jad_A Yellow fluorescent protein glutaredoxin fusion protein; electron transport, redox- active center, yeast, GRX1P, transport; HET: PIA; 2.7A {Aequorea victoria}
Probab=85.78 E-value=0.52 Score=42.75 Aligned_cols=67 Identities=13% Similarity=0.123 Sum_probs=35.0
Q ss_pred HHHHhccCCeEEEEEEecCCCCCCcHHHHH-HHHHcc-CCCCcEEEEEecccCCCcccHHHHhhcCcc-CceEE
Q psy3889 31 FDKILSKFHTTLVKFDIAYPYGAKHEAFLE-VAESSK-HQPDFLVAEVGVKDYGERDNEDLAKRGCLT-PQLLW 101 (243)
Q Consensus 31 F~~~v~~~k~vlV~FyA~~pWC~~cp~~~~-lA~~~~-~~~~v~vakVd~~d~~~~~n~~l~~~~~V~-~PTi~ 101 (243)
.+++|...+ ++.|.. |||++|..-.+ +-+... ....+.+..+|-.+.+......+.+..|.+ +|+|.
T Consensus 254 V~~lI~~~~--VvVYsk--~~CPyC~~Ak~~LL~~~gV~y~eidVlEld~~~~~~e~~~~L~~~tG~~TVPqVF 323 (362)
T 2jad_A 254 VKDLIAENE--IFVASK--TYCPYSHAALNTLFEKLKVPRSKVLVLQLNDMKEGADIQAALYEINGQRTVPNIY 323 (362)
T ss_dssp HHHHHHTCS--EEEEEC--TTCHHHHHHHHHHHTTTCCCTTTEEEEEGGGSTTHHHHHHHHHHHHCCCSSCEEE
T ss_pred HHHHhccCC--EEEEEc--CCCcchHHHHHHHHHHcCCCcceEEEEEeccccCCHHHHHHHHHHHCCCCcCEEE
Confidence 344455544 344888 99999965543 444432 112233333321100111124566778988 99985
No 303
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=83.74 E-value=0.96 Score=36.94 Aligned_cols=41 Identities=17% Similarity=0.118 Sum_probs=29.1
Q ss_pred cCCeEEEEEEecCCCCCCcHHH-----HHHHHHccCCCCcEEEEEecc
Q psy3889 37 KFHTTLVKFDIAYPYGAKHEAF-----LEVAESSKHQPDFLVAEVGVK 79 (243)
Q Consensus 37 ~~k~vlV~FyA~~pWC~~cp~~-----~~lA~~~~~~~~v~vakVd~~ 79 (243)
..+.++|.|+. ..||+|-.| ..+.+.+...++|.+...+..
T Consensus 28 ~a~vtvvef~D--~~CP~C~~~~~~~~~~l~~~~~~~g~v~~~~~~~p 73 (202)
T 3gha_A 28 DAPVTVVEFGD--YKCPSCKVFNSDIFPKIQKDFIDKGDVKFSFVNVM 73 (202)
T ss_dssp TCSEEEEEEEC--TTCHHHHHHHHHTHHHHHHHTTTTTSEEEEEEECC
T ss_pred CCCEEEEEEEC--CCChhHHHHHHHhhHHHHHHhccCCeEEEEEEecC
Confidence 45689999999 999999333 445555644457888877763
No 304
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=81.61 E-value=0.93 Score=42.92 Aligned_cols=65 Identities=11% Similarity=0.111 Sum_probs=39.6
Q ss_pred hhHHHHhccCCeEEEEEEecCCCCCCcHHHHHHHHHccCCCCcEEEEEecccCCC-cc-cHHHHhhcCcc-CceEE
Q psy3889 29 HNFDKILSKFHTTLVKFDIAYPYGAKHEAFLEVAESSKHQPDFLVAEVGVKDYGE-RD-NEDLAKRGCLT-PQLLW 101 (243)
Q Consensus 29 ~nF~~~v~~~k~vlV~FyA~~pWC~~cp~~~~lA~~~~~~~~v~vakVd~~d~~~-~~-n~~l~~~~~V~-~PTi~ 101 (243)
+.+++.+...+ ++.|.. +||++|..-.++-+... +.+-.+|++..++ .+ ...+.+..+.. +|++.
T Consensus 9 ~~v~~~i~~~~--v~vy~~--~~Cp~C~~~k~~L~~~~----i~~~~~dv~~~~~~~~~~~~l~~~~g~~tvP~v~ 76 (598)
T 2x8g_A 9 QWLRKTVDSAA--VILFSK--TTCPYCKKVKDVLAEAK----IKHATIELDQLSNGSAIQKCLASFSKIETVPQMF 76 (598)
T ss_dssp HHHHHHHHHCS--EEEEEC--TTCHHHHHHHHHHHHTT----CCCEEEEGGGSTTHHHHHHHTHHHHSCCCSCEEE
T ss_pred HHHHHHhccCC--EEEEEC--CCChhHHHHHHHHHHCC----CCcEEEEcccCcchHHHHHHHHHHhCCceeCEEE
Confidence 56777775554 455999 99999976666666542 3344566642111 11 13444567888 99984
No 305
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=77.09 E-value=2.7 Score=33.15 Aligned_cols=40 Identities=8% Similarity=-0.086 Sum_probs=27.2
Q ss_pred cCCeEEEEEEecCCCCCCc----HHH-HHHHHHccCCCCcEEEEEec
Q psy3889 37 KFHTTLVKFDIAYPYGAKH----EAF-LEVAESSKHQPDFLVAEVGV 78 (243)
Q Consensus 37 ~~k~vlV~FyA~~pWC~~c----p~~-~~lA~~~~~~~~v~vakVd~ 78 (243)
..+.+|+.|+. +-||+| |.+ ..+.+.+....+|.+.-...
T Consensus 10 ~a~~~i~~f~D--~~Cp~C~~~~~~l~~~l~~~~~~~~~v~~~~~~~ 54 (186)
T 3bci_A 10 NGKPLVVVYGD--YKCPYCKELDEKVMPKLRKNYIDNHKVEYQFVNL 54 (186)
T ss_dssp -CCCEEEEEEC--TTCHHHHHHHHHHHHHHHHHTTTTTSSEEEEEEC
T ss_pred CCCeEEEEEEC--CCChhHHHHHHHHHHHHHHHhccCCeEEEEEEec
Confidence 45678999999 999999 544 45656664334676666554
No 306
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis} PDB: 3f4r_A* 3f4t_A*
Probab=75.70 E-value=2.4 Score=35.38 Aligned_cols=40 Identities=10% Similarity=0.032 Sum_probs=28.1
Q ss_pred cCCeEEEEEEecCCCCCCc----H-HHHHHHHHccCCCCcEEEEEec
Q psy3889 37 KFHTTLVKFDIAYPYGAKH----E-AFLEVAESSKHQPDFLVAEVGV 78 (243)
Q Consensus 37 ~~k~vlV~FyA~~pWC~~c----p-~~~~lA~~~~~~~~v~vakVd~ 78 (243)
..+.++|.|+. +.||+| | .+.++.+.+...++|.+.-.+.
T Consensus 38 ~A~vtIvef~D--y~CP~C~~~~~~~~~~l~~~~~~~g~V~~v~~~~ 82 (226)
T 3f4s_A 38 KAPILMIEYAS--LTCYHCSLFHRNVFPKIKEKYIDTGKMLYIFRHF 82 (226)
T ss_dssp TCSEEEEEEEC--TTCHHHHHHHHHTHHHHHHHHTTTTSEEEEEEEC
T ss_pred CCCEEEEEEEC--CCCHHHHHHHHHHHHHHHHHcccCCeEEEEEEeC
Confidence 35678999999 999999 3 2345555664445777776665
No 307
>2wul_A Glutaredoxin related protein 5; chromosome 14 open reading frame 87, oxidoreductase, thiored family, GLRX5, FLB4739; HET: GSH; 2.40A {Homo sapiens}
Probab=71.05 E-value=5.7 Score=29.96 Aligned_cols=67 Identities=12% Similarity=0.115 Sum_probs=34.8
Q ss_pred hhhHHHHhccCCeEEEEEEecC---CCCCCcHHHHHHHHHccCCCCc-EEEEEecccCCCcccHHHHhhcCcc-CceEE
Q psy3889 28 THNFDKILSKFHTTLVKFDIAY---PYGAKHEAFLEVAESSKHQPDF-LVAEVGVKDYGERDNEDLAKRGCLT-PQLLW 101 (243)
Q Consensus 28 ~~nF~~~v~~~k~vlV~FyA~~---pWC~~cp~~~~lA~~~~~~~~v-~vakVd~~d~~~~~n~~l~~~~~V~-~PTi~ 101 (243)
.+..++.|++++.|+ |.--. |+||+|-.-.++-... .+ -+..+|+++ |..-...+.+.-+-+ +|.|+
T Consensus 10 ~e~i~~~i~~~~Vvv--F~Kgt~~~P~C~fc~~ak~lL~~~----gv~~~~~~~v~~-~~~~r~~l~~~sg~~TvPqIF 81 (118)
T 2wul_A 10 AEQLDALVKKDKVVV--FLKGTPEQPQCGFSNAVVQILRLH----GVRDYAAYNVLD-DPELRQGIKDYSNWPTIPQVY 81 (118)
T ss_dssp HHHHHHHHHHSSEEE--EESBCSSSBSSHHHHHHHHHHHHT----TCCSCEEEETTS-CHHHHHHHHHHHTCCSSCEEE
T ss_pred HHHHHHHHhcCCEEE--EEcCCCCCCCCHHHHHHHHHHHHh----CCcCeEeecccC-CHHHHHHHHHhccCCCCCeEe
Confidence 556777887765544 53311 4566663333333322 23 255677752 111234555666777 88875
No 308
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=66.09 E-value=3.7 Score=32.93 Aligned_cols=39 Identities=8% Similarity=-0.125 Sum_probs=24.8
Q ss_pred ccCCeEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEEEe
Q psy3889 36 SKFHTTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAEVG 77 (243)
Q Consensus 36 ~~~k~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vakVd 77 (243)
...+.+||.|.. ..|||| |.+.++.+.+ ..++|.+.-.+
T Consensus 12 g~a~vtiv~f~D--~~Cp~C~~~~~~~~~~l~~~-~~g~v~~v~r~ 54 (182)
T 3gn3_A 12 GHGPRLFEVFLE--PTCPFSVKAFFKLDDLLAQA-GEDNVTVRIRL 54 (182)
T ss_dssp ECCSEEEEEEEC--TTCHHHHHHHTTHHHHHHHH-CTTTEEEEEEE
T ss_pred CCCCEEEEEEEC--CCCHhHHHHHHHHHHHHHHh-CCCCEEEEEEE
Confidence 356789999999 999999 4444444443 12355554433
No 309
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=64.73 E-value=5.7 Score=32.46 Aligned_cols=40 Identities=8% Similarity=-0.156 Sum_probs=25.9
Q ss_pred cCCeEEEEEEecCCCCCCc----HHH-HHHHHHccCCCCcEEEEEec
Q psy3889 37 KFHTTLVKFDIAYPYGAKH----EAF-LEVAESSKHQPDFLVAEVGV 78 (243)
Q Consensus 37 ~~k~vlV~FyA~~pWC~~c----p~~-~~lA~~~~~~~~v~vakVd~ 78 (243)
..+.+||.|.. +-||+| |.. ..+.+.+...++|.+.-.+.
T Consensus 14 ~a~vtivef~D--~~Cp~C~~~~~~~~~~l~~~~i~~g~v~~v~r~~ 58 (205)
T 3gmf_A 14 AAKLRLVEFVS--YTCPHCSHFEIESEGQLKIGMVQPGKGAIEVRNF 58 (205)
T ss_dssp TCSEEEEEEEC--TTCHHHHHHHHHHHHHHHHHTTTTTSEEEEEEEC
T ss_pred CCCeEEEEEEC--CCCHHHHHHHHHHHHHHHHHhccCCeEEEEEEeC
Confidence 45689999999 999999 322 33443553445666654443
No 310
>2g2q_A Glutaredoxin-2; thioredoxin-fold, oxidoreductase, poxvirus; 2.50A {Vaccinia virus}
Probab=49.73 E-value=18 Score=27.56 Aligned_cols=37 Identities=22% Similarity=0.382 Sum_probs=29.1
Q ss_pred CeEEEEEEecCCCCCCcHHHHHHHHHccCCCCcEEEEEecc
Q psy3889 39 HTTLVKFDIAYPYGAKHEAFLEVAESSKHQPDFLVAEVGVK 79 (243)
Q Consensus 39 k~vlV~FyA~~pWC~~cp~~~~lA~~~~~~~~v~vakVd~~ 79 (243)
|.+|+-|-- |.|+-|..-.++-+++. ++..+.+||+-
T Consensus 2 K~tLILfGK--P~C~vCe~~s~~l~~le--deY~ilrVNIl 38 (124)
T 2g2q_A 2 KNVLIIFGK--PYCSICENVSDAVEELK--SEYDILHVDIL 38 (124)
T ss_dssp CEEEEEEEC--TTCHHHHHHHHHHHTTT--TTEEEEEEECC
T ss_pred CceEEEeCC--CccHHHHHHHHHHHHhh--ccccEEEEEee
Confidence 578999999 99999966666656653 47889999974
No 311
>2yru_A Steroid receptor RNA activator 1; SRAP, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=48.60 E-value=23 Score=26.67 Aligned_cols=37 Identities=16% Similarity=0.093 Sum_probs=22.1
Q ss_pred hHHHHHHHHHHHHhcccCChhhHHHHHHHhhHHHHhh
Q psy3889 195 EFLTREKARLKGLLNQKVSAQKKDELKSRMNILDSFA 231 (243)
Q Consensus 195 ~~i~~E~~RL~~~l~~~~~~~k~d~~~~r~NIL~~F~ 231 (243)
+.+.+.++++-.--.+.....+.|+..+|+|+|-.-.
T Consensus 16 ~~l~~~l~~~l~~~~~~~~k~~~~D~~KRL~~LfdkL 52 (118)
T 2yru_A 16 EDVLRPLEQALEDCHGHTKKQVCDDISRRLALLREQW 52 (118)
T ss_dssp HHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 4455555554222124566666788888888886554
No 312
>1t4y_A Adaptive-response sensory-kinase SASA; alpha/beta protein, thioredoxin fold, transferase; NMR {Synechococcus elongatus} SCOP: c.47.1.15 PDB: 1t4z_A
Probab=45.91 E-value=42 Score=24.86 Aligned_cols=43 Identities=12% Similarity=0.013 Sum_probs=32.3
Q ss_pred HHHHHHHHccCCCCcEEEEEecccCCCcccHHHHhhcCcc-CceEE-Eec
Q psy3889 57 AFLEVAESSKHQPDFLVAEVGVKDYGERDNEDLAKRGCLT-PQLLW-AFC 104 (243)
Q Consensus 57 ~~~~lA~~~~~~~~v~vakVd~~d~~~~~n~~l~~~~~V~-~PTi~-lF~ 104 (243)
...++.+..-...++.+--||+. +++++++.++|- .||++ ..+
T Consensus 31 nL~~i~e~~l~~~~y~LeVIDv~-----eqPeLAE~~~IvATPTLIK~~P 75 (105)
T 1t4y_A 31 RVKNILAAVEATVPISLQVINVA-----DQPQLVEYYRLVVTPALVKIGP 75 (105)
T ss_dssp HHHHHHHHHCCSSCEEEEEEETT-----TCHHHHHHTTCCSSSEEEEEES
T ss_pred HHHHHHHHhccCCceEEEEeecc-----cCHHHHhHcCeeeccHhhccCC
Confidence 44444444432457889899997 899999999999 99976 565
No 313
>3tdg_A DSBG, putative uncharacterized protein; thioredoxin fold, reductase, oxidoreductase; HET: P6G; 2.10A {Helicobacter pylori}
Probab=44.86 E-value=9.2 Score=33.16 Aligned_cols=26 Identities=8% Similarity=0.052 Sum_probs=19.6
Q ss_pred CCeEEEEEEecCCCCCCc-HHHHHHHHHc
Q psy3889 38 FHTTLVKFDIAYPYGAKH-EAFLEVAESS 65 (243)
Q Consensus 38 ~k~vlV~FyA~~pWC~~c-p~~~~lA~~~ 65 (243)
++.+++.|+. |.||+| -.+.++...+
T Consensus 147 gk~~I~vFtD--p~CPYCkkl~~~l~~~l 173 (273)
T 3tdg_A 147 KDKILYIVSD--PMCPHCQKELTKLRDHL 173 (273)
T ss_dssp TTCEEEEEEC--TTCHHHHHHHHTHHHHH
T ss_pred CCeEEEEEEC--cCChhHHHHHHHHHHHh
Confidence 6689999999 999999 4454554344
No 314
>3vmx_A Voltage-gated hydrogen channel 1; coiled-coil, ION channel, ION transport, membrane protein; 1.45A {Mus musculus}
Probab=43.20 E-value=40 Score=21.36 Aligned_cols=33 Identities=18% Similarity=0.224 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHHHhc
Q psy3889 174 AEFYVKTMRKLVEISGEGSESEFLTREKARLKGLLN 209 (243)
Q Consensus 174 a~~Y~kvm~ki~~~~~~~~g~~~i~~E~~RL~~~l~ 209 (243)
-..|..++.|+.+- -..-+..+.|+.||+++|+
T Consensus 10 Ke~n~~L~~kv~~L---e~~c~~~eQEieRL~~LLk 42 (48)
T 3vmx_A 10 KQINIQLATKIQHL---EFSCSEKEQEIERLNKLLK 42 (48)
T ss_dssp HHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH---HHHccHHHHHHHHHHHHHH
Confidence 34566666666532 0025678899999999993
No 315
>1uo4_A General control protein GCN4; four helix bundle, cavity, iodobenzene; 1.70A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1uo3_A 1unt_A 1uo5_A 1unu_A 1unv_A 1uo1_A 2ccf_A 2cce_A 1unx_A 1unw_A 1w5j_A* 1w5k_A* 1u9f_A* 3f86_A* 3f87_A* 3hez_A* 3c3f_A*
Probab=39.71 E-value=34 Score=20.09 Aligned_cols=16 Identities=38% Similarity=0.418 Sum_probs=13.0
Q ss_pred hhHHHHHHHHHHHHhc
Q psy3889 194 SEFLTREKARLKGLLN 209 (243)
Q Consensus 194 ~~~i~~E~~RL~~~l~ 209 (243)
..-++.|.+||+.+|.
T Consensus 17 n~~Le~EV~RLk~LL~ 32 (34)
T 1uo4_A 17 LYHIENELARIKKLLG 32 (34)
T ss_dssp HHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHHHc
Confidence 4567889999999984
No 316
>2bni_A General control protein GCN4; four helix bundle, antiparallel four helix bundle acyl transferase; HET: TYZ; 1.5A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 2ccn_A 1w5k_A* 2ccf_A 2cce_A 1w5j_A* 1uo2_A 1gcl_A 1uo1_A 1unv_A 1uo0_A 1unt_A 1uo5_A 1unz_A 1unx_A 1unu_A 1unw_A 1uo4_A 1uo3_A 1uny_A 1u9f_A* ...
Probab=38.98 E-value=32 Score=20.17 Aligned_cols=16 Identities=38% Similarity=0.526 Sum_probs=12.8
Q ss_pred hhHHHHHHHHHHHHhc
Q psy3889 194 SEFLTREKARLKGLLN 209 (243)
Q Consensus 194 ~~~i~~E~~RL~~~l~ 209 (243)
..-++.|.+||+.||.
T Consensus 17 ~~~L~~EV~RLk~lL~ 32 (34)
T 2bni_A 17 GHHICNELARIKKLLG 32 (34)
T ss_dssp HHHHHHHHHHHHHHC-
T ss_pred cHHHHHHHHHHHHHhc
Confidence 5668889999999984
No 317
>2wq1_A General control protein GCN4; TAA, nucleus, coiled coil, DNA-binding, protein export, ION coordination, polar core residues; 1.08A {Saccharomyces cerevisiae} PDB: 2wq0_A 2wq2_A 2wq3_A 2wpz_A 2wpy_A 1ij0_A 1ij1_A 1gcm_A 1rb5_A 1rb6_A 1rb1_A 1rb4_A 1swi_A 3k7z_A 1zii_A 1zij_A 1ij2_A 1ij3_A 1zil_A 1zim_A ...
Probab=38.59 E-value=40 Score=19.59 Aligned_cols=16 Identities=31% Similarity=0.127 Sum_probs=13.0
Q ss_pred hhHHHHHHHHHHHHhc
Q psy3889 194 SEFLTREKARLKGLLN 209 (243)
Q Consensus 194 ~~~i~~E~~RL~~~l~ 209 (243)
..-++.|.+||+.|+.
T Consensus 16 ~~~le~EV~Rl~~ll~ 31 (33)
T 2wq1_A 16 IYHNTNEIARNTKLVG 31 (33)
T ss_dssp HHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHHHhc
Confidence 4567889999999984
No 318
>3c3g_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-beta) backbone; helix bundle, foldamer, unknown function protein; HET: HMR B3Q B3D B3E B3L BIL B3K BAL GOL; 1.80A {Synthetic} PDB: 3heu_A* 3het_A* 3hev_A* 3hew_A* 3hey_A* 3hex_A* 3c3h_A*
Probab=37.00 E-value=42 Score=19.50 Aligned_cols=16 Identities=31% Similarity=0.335 Sum_probs=13.2
Q ss_pred hhHHHHHHHHHHHHhc
Q psy3889 194 SEFLTREKARLKGLLN 209 (243)
Q Consensus 194 ~~~i~~E~~RL~~~l~ 209 (243)
..-++.|.+||+.||.
T Consensus 16 ~~~Le~EV~RLk~lL~ 31 (33)
T 3c3g_A 16 XYHXENXLARIKXLLX 31 (33)
T ss_dssp HHHHHHHHHHHHHHHC
T ss_pred hhHHHHHHHHHHHHHc
Confidence 5667889999999984
No 319
>2r2v_A GCN4 leucine zipper; coiled coils, anti-parallel tetramer, protein design, de novo protein; HET: CIT; 1.90A {Saccharomyces cerevisiae} SCOP: h.1.3.1
Probab=36.58 E-value=43 Score=19.64 Aligned_cols=16 Identities=31% Similarity=0.216 Sum_probs=12.8
Q ss_pred hhHHHHHHHHHHHHhc
Q psy3889 194 SEFLTREKARLKGLLN 209 (243)
Q Consensus 194 ~~~i~~E~~RL~~~l~ 209 (243)
..-++.|.+||.+||.
T Consensus 17 ~~~l~nEv~Rl~~lLg 32 (34)
T 2r2v_A 17 LYHNANELARVAKLLG 32 (34)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhc
Confidence 4557789999999984
No 320
>3ktb_A Arsenical resistance operon trans-acting represso; alpha-beta-alpha sandwich, helix-turn-helix, structural GENO PSI-2; 2.10A {Bacteroides vulgatus}
Probab=36.25 E-value=72 Score=23.55 Aligned_cols=44 Identities=16% Similarity=0.280 Sum_probs=29.9
Q ss_pred HHHHHHHHHc---cCCCCcEEEEEecccCCCcc----c---HHHHhhcCcc-CceEEE
Q psy3889 56 EAFLEVAESS---KHQPDFLVAEVGVKDYGERD----N---EDLAKRGCLT-PQLLWA 102 (243)
Q Consensus 56 p~~~~lA~~~---~~~~~v~vakVd~~d~~~~~----n---~~l~~~~~V~-~PTi~l 102 (243)
|.+-+++..+ +. ..+.+.+.|... ++. | .++.+++|+. +|.+.+
T Consensus 27 ~eL~~~~~~~~~lk~-~Gi~V~RyNL~~--~P~~F~~N~~V~~~L~~~G~~~LP~~~V 81 (106)
T 3ktb_A 27 PELMRIAVVIESLKK-QGIIVTRHNLRD--EPQVYVSNKTVNDFLQKHGADALPITLV 81 (106)
T ss_dssp HHHHHHHHHHHHHHH-TTCCCEEEETTT--CTTHHHHSHHHHHHHHTTCGGGCSEEEE
T ss_pred HHHHHHHHHHHHHHH-CCCEEEEEcccc--ChHHHhcCHHHHHHHHHcCcccCCEEEE
Confidence 7776666654 33 468899999862 111 1 3677889999 999875
No 321
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, STRU genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=35.54 E-value=24 Score=28.13 Aligned_cols=30 Identities=7% Similarity=-0.057 Sum_probs=23.1
Q ss_pred EEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEE
Q psy3889 41 TLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVA 74 (243)
Q Consensus 41 vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~va 74 (243)
.|..|+. +-||+| |.++++++.+.. ++.|.
T Consensus 4 ~I~~~~D--~~CP~cy~~~~~l~~l~~~~~~--~v~v~ 37 (208)
T 3kzq_A 4 KLYYVHD--PMCSWCWGYKPTIEKLKQQLPG--VIQFE 37 (208)
T ss_dssp EEEEEEC--TTCHHHHHHHHHHHHHHHHSCT--TSEEE
T ss_pred EEEEEEC--CCCchhhhhhHHHHHHHHhCCC--CceEE
Confidence 5677888 999999 899999988843 45444
No 322
>3c3f_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-alpha-beta) backbone...; helix bundle, foldamer, unknown function, de novo protein; HET: B3K B3D B3E BIL B3L BAL; 2.00A {Synthetic} SCOP: h.1.3.1
Probab=34.22 E-value=49 Score=19.32 Aligned_cols=16 Identities=31% Similarity=0.285 Sum_probs=13.1
Q ss_pred hhHHHHHHHHHHHHhc
Q psy3889 194 SEFLTREKARLKGLLN 209 (243)
Q Consensus 194 ~~~i~~E~~RL~~~l~ 209 (243)
..-++.|.+||+.||.
T Consensus 17 ~~~Le~EV~RLk~ll~ 32 (34)
T 3c3f_A 17 LYHXENEXARIXKLLX 32 (34)
T ss_dssp HHHHHHHHHHHHHHHC
T ss_pred hhHHHHHHHHHHHHHh
Confidence 5567889999999984
No 323
>3m48_A General control protein GCN4; leucine zipper, synthetic peptide, alpha helix, activa amino-acid biosynthesis, DNA-binding, nucleus; 1.45A {Synthetic} PDB: 3i1g_A 2ahp_A* 2o7h_A
Probab=32.35 E-value=52 Score=19.15 Aligned_cols=16 Identities=44% Similarity=0.397 Sum_probs=13.0
Q ss_pred hhHHHHHHHHHHHHhc
Q psy3889 194 SEFLTREKARLKGLLN 209 (243)
Q Consensus 194 ~~~i~~E~~RL~~~l~ 209 (243)
..-++.|.+||+.+|.
T Consensus 16 n~~Le~EV~RLk~Ll~ 31 (33)
T 3m48_A 16 NWNLENEVARLKKLVG 31 (33)
T ss_dssp HHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHHhh
Confidence 5567889999999984
No 324
>3kgk_A Arsenical resistance operon trans-acting represso; alpha+beta, chaperone, DNA-binding, RE transcription, transcription regulation; 1.40A {Escherichia coli} PDB: 3mwh_A
Probab=29.16 E-value=34 Score=25.56 Aligned_cols=53 Identities=11% Similarity=0.203 Sum_probs=34.5
Q ss_pred HHHHHHHHHc---cCCCCcEEEEEecccCCCcc----c---HHHHhhcCcc-CceEEE---------eccchHhhh
Q psy3889 56 EAFLEVAESS---KHQPDFLVAEVGVKDYGERD----N---EDLAKRGCLT-PQLLWA---------FCVADSLNK 111 (243)
Q Consensus 56 p~~~~lA~~~---~~~~~v~vakVd~~d~~~~~----n---~~l~~~~~V~-~PTi~l---------F~~~~~l~~ 111 (243)
|.+-+++..+ +. ..+.+.+.|... +.. | .++.+++|+. +|.+.+ |++.++|.+
T Consensus 24 ~~L~~~~~~~~~lk~-~Gi~V~RyNL~~--~P~aF~~N~~V~~~L~~~G~~~LP~~~VDGevv~~G~yPt~eEl~~ 96 (110)
T 3kgk_A 24 QALVDFSTDVQWLKQ-SGVQIERFNLAQ--QPMSFVQNEKVKAFIEASGAEGLPLLLLDGETVMAGRYPKRAELAR 96 (110)
T ss_dssp CHHHHHHHHHHHHHH-HTCCEEEEETTT--CTTHHHHSHHHHHHHHHHCGGGCCEEEETTEEEEESSCCCHHHHHH
T ss_pred HHHHHHHHHHHHHHH-CCCeEEEEcccc--ChHHHhcCHHHHHHHHHcCcccCCEEEECCEEEEeccCCCHHHHHH
Confidence 5555555543 32 368899999862 111 1 3677889999 999875 336677777
No 325
>1kd8_A GABH AIV, GCN4 acid base heterodimer acid-D12IA16V; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kdd_A 1kd9_A
Probab=28.18 E-value=70 Score=18.92 Aligned_cols=16 Identities=31% Similarity=0.123 Sum_probs=13.0
Q ss_pred hhHHHHHHHHHHHHhc
Q psy3889 194 SEFLTREKARLKGLLN 209 (243)
Q Consensus 194 ~~~i~~E~~RL~~~l~ 209 (243)
..-++.|.+||+.++.
T Consensus 17 ~~~Le~EV~RL~~ll~ 32 (36)
T 1kd8_A 17 VWHLENEVARLEKENA 32 (36)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhc
Confidence 5667889999999883
No 326
>2oxj_A Hybrid alpha/beta peptide based on the GCN4-P1 Se heptad positions B and F substituted...; helix bundle, foldamer, unknown function; HET: B3K B3D B3E B3S B3Y B3X B3A BAL; 2.00A {Synthetic} PDB: 2oxk_A*
Probab=28.11 E-value=75 Score=18.56 Aligned_cols=16 Identities=38% Similarity=0.476 Sum_probs=13.1
Q ss_pred hhHHHHHHHHHHHHhc
Q psy3889 194 SEFLTREKARLKGLLN 209 (243)
Q Consensus 194 ~~~i~~E~~RL~~~l~ 209 (243)
.+-++.|..||+.||.
T Consensus 17 n~~Le~eV~rLk~ll~ 32 (34)
T 2oxj_A 17 NXHLEXEVXRLKXLVX 32 (34)
T ss_dssp HHHHHHHHHHHHHHHS
T ss_pred hhhHHHHHHHHHHHHh
Confidence 5667889999999884
No 327
>2kok_A Arsenate reductase; brucellosis, zoonotic, oxidoreductase, S genomics, seattle structural genomics center for infectious ssgcid; NMR {Brucella abortus}
Probab=27.50 E-value=43 Score=24.51 Aligned_cols=32 Identities=9% Similarity=-0.101 Sum_probs=18.5
Q ss_pred EEEEEecCCCCCCcHHHHHHHHHccCCCCcEEEEEecc
Q psy3889 42 LVKFDIAYPYGAKHEAFLEVAESSKHQPDFLVAEVGVK 79 (243)
Q Consensus 42 lV~FyA~~pWC~~cp~~~~lA~~~~~~~~v~vakVd~~ 79 (243)
++-|+. |||+.|..-.++-++. .+.+-.+|+.
T Consensus 7 i~iY~~--~~C~~C~ka~~~L~~~----gi~y~~~di~ 38 (120)
T 2kok_A 7 VTIYGI--KNCDTMKKARIWLEDH----GIDYTFHDYK 38 (120)
T ss_dssp EEEEEC--SSCHHHHHHHHHHHHH----TCCEEEEEHH
T ss_pred EEEEEC--CCChHHHHHHHHHHHc----CCcEEEEeee
Confidence 344666 9999994333333332 3445566764
No 328
>2hy6_A General control protein GCN4; protein design, parallel heptamer, protein structure, biosyn protein; 1.25A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 2nrn_A 3crp_A 2b1f_A 3crp_B 2ipz_A 3ck4_A 3ck4_B 2b22_A 1ce9_A
Probab=26.82 E-value=78 Score=18.48 Aligned_cols=16 Identities=25% Similarity=0.250 Sum_probs=12.9
Q ss_pred hhHHHHHHHHHHHHhc
Q psy3889 194 SEFLTREKARLKGLLN 209 (243)
Q Consensus 194 ~~~i~~E~~RL~~~l~ 209 (243)
..-++.|.+||+.++.
T Consensus 17 ~~~Le~eV~RL~~ll~ 32 (34)
T 2hy6_A 17 NYHLANAVARLAKAVG 32 (34)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhc
Confidence 5567789999999884
No 329
>1kd8_B GABH BLL, GCN4 acid base heterodimer base-D12LA16L; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kd9_B 1kdd_B
Probab=24.99 E-value=87 Score=18.52 Aligned_cols=16 Identities=31% Similarity=0.111 Sum_probs=12.8
Q ss_pred hhHHHHHHHHHHHHhc
Q psy3889 194 SEFLTREKARLKGLLN 209 (243)
Q Consensus 194 ~~~i~~E~~RL~~~l~ 209 (243)
..-++.|.+||+.++.
T Consensus 17 ~~~Le~eV~RLk~ll~ 32 (36)
T 1kd8_B 17 LWHLKNKVARLKKKNA 32 (36)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhc
Confidence 5567789999999984
No 330
>2ijr_A Hypothetical protein API92; structural genomics, PSI, protein structure initiative; 2.70A {Yersinia pseudotuberculosis} SCOP: e.66.1.1
Probab=22.73 E-value=66 Score=27.99 Aligned_cols=44 Identities=18% Similarity=0.209 Sum_probs=30.5
Q ss_pred cCCeEEEEEEecCCCCCCc-HHHHHHHHHcc-------CCCCcEEEEEecccCC
Q psy3889 37 KFHTTLVKFDIAYPYGAKH-EAFLEVAESSK-------HQPDFLVAEVGVKDYG 82 (243)
Q Consensus 37 ~~k~vlV~FyA~~pWC~~c-p~~~~lA~~~~-------~~~~v~vakVd~~d~~ 82 (243)
.....-|.|.+ |||++. .+...++..|. .++..-+.--||-|-|
T Consensus 218 g~~~L~v~FDT--PW~PPs~ev~~~lS~~f~C~irH~y~e~~~~~~Gy~~Yd~G 269 (300)
T 2ijr_A 218 RINSLRLDFDS--PSYPPSAELMGELSAVFDCEIRHWYQEPVNGIRGYDCYDRG 269 (300)
T ss_dssp ETTEEEEEEEE--ESSCCCHHHHHHHHHHTTCEEEEEEEETTTTEEEEEEEETT
T ss_pred CCCeEEEeccC--CCCCChHHHHHHHhccCCeeEEEEEecCCCCccCcccccCC
Confidence 34567899999 999998 68888988873 1334445556664433
No 331
>2xze_Q Charged multivesicular BODY protein 3; hydrolase-protein transport complex; 1.75A {Homo sapiens}
Probab=22.39 E-value=34 Score=20.89 Aligned_cols=13 Identities=31% Similarity=0.503 Sum_probs=9.2
Q ss_pred HHHHHHHhhHHHH
Q psy3889 217 KDELKSRMNILDS 229 (243)
Q Consensus 217 ~d~~~~r~NIL~~ 229 (243)
+.+||.|++-|+|
T Consensus 28 i~~MqsRLaALRS 40 (40)
T 2xze_Q 28 LEAMQSRLATLRS 40 (40)
T ss_dssp HHHHHHHHHHHTC
T ss_pred HHHHHHHHHHhcC
Confidence 4458888888764
No 332
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, STRU genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=21.80 E-value=68 Score=25.32 Aligned_cols=19 Identities=21% Similarity=-0.088 Sum_probs=15.6
Q ss_pred cHHHHhhcCcc-CceEEEec
Q psy3889 86 NEDLAKRGCLT-PQLLWAFC 104 (243)
Q Consensus 86 n~~l~~~~~V~-~PTi~lF~ 104 (243)
+...+.++||. +||+++..
T Consensus 158 ~~~~a~~~gv~g~Pt~~v~~ 177 (208)
T 3kzq_A 158 QLSLAKSLGVNSYPSLVLQI 177 (208)
T ss_dssp HHHHHHHTTCCSSSEEEEEE
T ss_pred HHHHHHHcCCCcccEEEEEE
Confidence 45677889999 99999864
No 333
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=20.57 E-value=50 Score=26.00 Aligned_cols=32 Identities=9% Similarity=-0.039 Sum_probs=21.6
Q ss_pred eEEEEEEecCCCCCCc----HHHHHHHHHccCCCCcEEEE
Q psy3889 40 TTLVKFDIAYPYGAKH----EAFLEVAESSKHQPDFLVAE 75 (243)
Q Consensus 40 ~vlV~FyA~~pWC~~c----p~~~~lA~~~~~~~~v~vak 75 (243)
..++.|+. +-||+| |.+..+++ +. ..++.+.-
T Consensus 8 ~~I~~f~D--~~CP~C~~~~~~~~~l~~-~~-~~~v~v~~ 43 (216)
T 2in3_A 8 PVLWYIAD--PMCSWCWGFAPVIENIRQ-EY-SAFLTVKI 43 (216)
T ss_dssp CEEEEEEC--TTCHHHHHHHHHHHHHHH-HH-TTTCEEEE
T ss_pred eeEEEEEC--CCCchhhcchHHHHHHHh-cC-CCCeEEEE
Confidence 56777888 999999 77777776 32 22454443
Done!