Your job contains 1 sequence.
>psy3897
MKRRRRSDEKRLKAKSLTSMSVWERKSLFRKLPPRTGFNPVCTSGLRISALDHVGGINGP
LEGYVKTKPRKSPPPNGYGVYALDTEMVYTVHGLEVARVTVVNVDGRLIYNTLVKPDCEI
IDYNTKYSGISAKDFIRNPYKTLKDVQNDLMGFVSKDSIIVGHGLENDLRALKLIHSNII
DTSVLFPHSFGLPYRRSLKSIVSQLLHQSIQSGTHDSFEDARACIDLILWKLLSDFRYNH
The BLAST search returned 6 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy3897
(240 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|A0PJM3 - symbol:REXO1L2P "Putative exonuclease ... 461 9.7e-46 2
MGI|MGI:1914182 - symbol:Rexo1 "REX1, RNA exonuclease 1 h... 473 1.0e-45 2
UNIPROTKB|F5GW92 - symbol:REXO1L10P "Protein REXO1L10P" s... 461 2.2e-45 2
UNIPROTKB|Q8IX06 - symbol:REXO1L1 "Exonuclease GOR" speci... 460 2.9e-45 2
UNIPROTKB|F1P0Z1 - symbol:REXO1 "Uncharacterized protein"... 483 8.2e-45 1
RGD|1564472 - symbol:RGD1564472 "similar to Transcription... 468 1.9e-44 1
ZFIN|ZDB-GENE-030131-1650 - symbol:rexo1 "REX1, RNA exonu... 475 5.8e-44 1
FB|FBgn0261548 - symbol:CG42666 species:7227 "Drosophila ... 467 1.1e-43 1
UNIPROTKB|Q8N1G1 - symbol:REXO1 "RNA exonuclease 1 homolo... 471 1.6e-43 1
UNIPROTKB|E2QX02 - symbol:REXO1 "Uncharacterized protein"... 469 2.5e-43 1
UNIPROTKB|F1P8U5 - symbol:F1P8U5 "Uncharacterized protein... 456 3.5e-43 1
UNIPROTKB|F1SDH3 - symbol:LOC100525449 "Uncharacterized p... 467 4.2e-43 1
UNIPROTKB|E1BDF8 - symbol:LOC788506 "Uncharacterized prot... 458 3.8e-42 1
ZFIN|ZDB-GENE-061013-448 - symbol:zgc:152968 "zgc:152968"... 449 3.7e-41 1
UNIPROTKB|I3LLP7 - symbol:I3LLP7 "Uncharacterized protein... 437 4.4e-40 1
UNIPROTKB|F1N3K9 - symbol:LOC100335177 "Uncharacterized p... 421 1.8e-39 1
FB|FBgn0039544 - symbol:CG12877 species:7227 "Drosophila ... 418 4.9e-39 2
SGD|S000003508 - symbol:RNH70 "3'-5' exoribonuclease" spe... 383 1.9e-35 1
TAIR|locus:2145244 - symbol:AT5G25800 species:3702 "Arabi... 341 1.7e-30 1
POMBASE|SPAC637.09 - symbol:SPAC637.09 "ribonuclease H70 ... 327 9.2e-29 1
POMBASE|SPAC1782.08c - symbol:rex3 "exonuclease Rex3 (pre... 307 1.5e-28 2
ASPGD|ASPL0000067196 - symbol:AN7566 species:162425 "Emer... 321 6.1e-28 1
CGD|CAL0006149 - symbol:orf19.6195 species:5476 "Candida ... 316 2.3e-27 1
WB|WBGene00004095 - symbol:pqe-1 species:6239 "Caenorhabd... 310 4.1e-27 2
CGD|CAL0006310 - symbol:orf19.4948 species:5476 "Candida ... 293 6.6e-26 1
UNIPROTKB|G4MYV4 - symbol:MGG_15523 "Uncharacterized prot... 285 2.1e-25 2
DICTYBASE|DDB_G0291590 - symbol:rexo1 "RNA exonuclease 1"... 297 2.2e-25 1
UNIPROTKB|E2RFH9 - symbol:LOC479820 "Uncharacterized prot... 296 3.5e-25 1
WB|WBGene00013244 - symbol:Y56A3A.33 species:6239 "Caenor... 282 9.7e-25 1
UNIPROTKB|G4N4M9 - symbol:MGG_06005 "RNA exonuclease 3" s... 200 4.8e-24 2
UNIPROTKB|E2RFH4 - symbol:LOC479820 "Uncharacterized prot... 284 6.2e-24 1
UNIPROTKB|Q2T9U5 - symbol:Q2T9U5 "Putative RNA exonucleas... 282 1.2e-23 1
UNIPROTKB|E1BR93 - symbol:LOC427001 "Uncharacterized prot... 280 1.8e-23 1
UNIPROTKB|F1P5D1 - symbol:LOC427001 "Uncharacterized prot... 280 1.9e-23 1
SGD|S000004097 - symbol:REX3 "RNA exonuclease" species:49... 269 2.7e-23 1
UNIPROTKB|Q96IC2 - symbol:44M2.3 "Putative RNA exonucleas... 276 5.0e-23 1
FB|FBgn0035707 - symbol:CG8368 species:7227 "Drosophila m... 272 1.0e-22 1
UNIPROTKB|F1RPB4 - symbol:F1RPB4 "Uncharacterized protein... 254 1.2e-20 1
RGD|1305412 - symbol:Exnef "exonuclease NEF-sp" species:1... 251 2.3e-20 1
UNIPROTKB|F1M6V9 - symbol:Exnef "Protein Exnef" species:1... 251 2.3e-20 1
UNIPROTKB|F1PWV6 - symbol:AEN "Uncharacterized protein" s... 238 4.4e-20 1
UNIPROTKB|J9PA78 - symbol:AEN "Uncharacterized protein" s... 238 4.4e-20 1
ASPGD|ASPL0000071877 - symbol:AN5013 species:162425 "Emer... 172 1.2e-19 2
UNIPROTKB|Q5REE2 - symbol:AEN "Apoptosis-enhancing nuclea... 229 4.0e-19 1
TAIR|locus:2083163 - symbol:SDN1 "small RNA degrading nuc... 231 7.0e-19 1
WB|WBGene00015462 - symbol:C05C8.5 species:6239 "Caenorha... 235 7.6e-19 1
MGI|MGI:1915298 - symbol:Aen "apoptosis enhancing nucleas... 226 8.3e-19 1
TAIR|locus:2169717 - symbol:SDN2 "small RNA degrading nuc... 232 8.7e-19 1
UNIPROTKB|E1C018 - symbol:AEN "Uncharacterized protein" s... 225 1.1e-18 1
UNIPROTKB|H3BQ98 - symbol:LOC81691 "Protein LOC81691" spe... 224 1.4e-18 1
RGD|1305051 - symbol:Aen "apoptosis enhancing nuclease" s... 221 2.8e-18 1
UNIPROTKB|Q2YDK1 - symbol:ISG20L2 "Interferon-stimulated ... 222 3.2e-18 1
UNIPROTKB|F8WG03 - symbol:Aen "Apoptosis-enhancing nuclea... 221 4.6e-18 1
FB|FBgn0036405 - symbol:CG6833 species:7227 "Drosophila m... 218 5.8e-18 1
UNIPROTKB|Q8WTP8 - symbol:AEN "Apoptosis-enhancing nuclea... 218 5.8e-18 1
TAIR|locus:2155563 - symbol:SDN3 "small RNA degrading nuc... 228 7.2e-18 1
UNIPROTKB|F1MZX4 - symbol:LOC614749 "Uncharacterized prot... 217 7.5e-18 1
TAIR|locus:2086320 - symbol:AT3G15080 species:3702 "Arabi... 214 1.6e-17 1
UNIPROTKB|F1SRT3 - symbol:AEN "Uncharacterized protein" s... 213 2.1e-17 1
UNIPROTKB|H9L3P2 - symbol:H9L3P2 "Uncharacterized protein... 213 2.3e-17 1
ZFIN|ZDB-GENE-070928-8 - symbol:isg20l2 "interferon stimu... 212 2.5e-17 1
UNIPROTKB|H9L3P1 - symbol:H9L3P1 "Uncharacterized protein... 211 3.9e-17 1
UNIPROTKB|E2QS77 - symbol:ISG20L2 "Uncharacterized protei... 205 2.9e-16 1
UNIPROTKB|Q9H9L3 - symbol:ISG20L2 "Interferon-stimulated ... 201 8.9e-16 1
RGD|1359413 - symbol:Isg20l2 "interferon stimulated exonu... 200 1.4e-15 1
UNIPROTKB|F1RHI9 - symbol:ISG20L2 "Uncharacterized protei... 198 1.7e-15 1
POMBASE|SPBC1604.09c - symbol:SPBC1604.09c "exoribonuclea... 194 2.0e-15 1
RGD|1306407 - symbol:Isg20 "interferon stimulated exonucl... 191 4.2e-15 1
UNIPROTKB|F1N5B5 - symbol:REXO4 "Uncharacterized protein"... 180 5.4e-15 2
ZFIN|ZDB-GENE-120215-216 - symbol:si:ch73-209e20.4 "si:ch... 196 5.7e-15 1
UNIPROTKB|Q96AZ6 - symbol:ISG20 "Interferon-stimulated ge... 188 8.8e-15 1
UNIPROTKB|Q66UW5 - symbol:Isg20 "Interferon-stimulated ge... 187 1.1e-14 1
MGI|MGI:2140076 - symbol:Isg20l2 "interferon stimulated e... 190 1.8e-14 1
SGD|S000005440 - symbol:REX4 "Putative RNA exonuclease po... 185 2.1e-14 1
ASPGD|ASPL0000065793 - symbol:AN10955 species:162425 "Eme... 184 3.4e-14 1
UNIPROTKB|H3BM72 - symbol:LOC81691 "Protein LOC81691" spe... 182 3.8e-14 1
UNIPROTKB|H9KZR7 - symbol:H9KZR7 "Uncharacterized protein... 186 5.4e-14 1
UNIPROTKB|F1NQP7 - symbol:Gga.48606 "Uncharacterized prot... 186 6.9e-14 1
UNIPROTKB|I3LB04 - symbol:ISG20 "Uncharacterized protein"... 176 1.6e-13 1
ASPGD|ASPL0000070457 - symbol:AN4357 species:162425 "Emer... 185 1.7e-13 1
MGI|MGI:1928895 - symbol:Isg20 "interferon-stimulated pro... 177 2.3e-13 1
WB|WBGene00012465 - symbol:Y17G7B.12 species:6239 "Caenor... 175 3.9e-13 1
UNIPROTKB|E1BNM5 - symbol:ISG20 "Uncharacterized protein"... 171 5.6e-13 1
UNIPROTKB|G3N2Q8 - symbol:ISG20 "Uncharacterized protein"... 171 5.6e-13 1
RGD|1306220 - symbol:Rexo4 "REX4, RNA exonuclease 4 homol... 176 8.4e-13 1
UNIPROTKB|F1PBR5 - symbol:REXO4 "Uncharacterized protein"... 175 2.2e-12 1
UNIPROTKB|I3L751 - symbol:REXO4 "Uncharacterized protein"... 175 2.3e-12 1
UNIPROTKB|Q9GZR2 - symbol:REXO4 "RNA exonuclease 4" speci... 175 2.3e-12 1
UNIPROTKB|E2R2F5 - symbol:ISG20 "Uncharacterized protein"... 164 3.1e-12 1
UNIPROTKB|F6X5D6 - symbol:ISG20 "Uncharacterized protein"... 164 3.1e-12 1
DICTYBASE|DDB_G0281327 - symbol:rexo4 "RNA exonuclease 4"... 168 2.9e-11 1
MGI|MGI:2684957 - symbol:Rexo4 "REX4, RNA exonuclease 4 h... 168 8.5e-11 1
CGD|CAL0003518 - symbol:orf19.5220 species:5476 "Candida ... 156 1.3e-09 1
FB|FBgn0033352 - symbol:CG8232 species:7227 "Drosophila m... 161 2.8e-09 2
CGD|CAL0004517 - symbol:orf19.4764 species:5476 "Candida ... 163 3.4e-09 2
TAIR|locus:2083153 - symbol:AT3G50090 species:3702 "Arabi... 152 6.6e-09 1
UNIPROTKB|E2R7T9 - symbol:REXO4 "Uncharacterized protein"... 154 7.8e-09 1
POMBASE|SPAC22G7.04 - symbol:ubp13 "ubiquitin C-terminal ... 157 1.2e-08 1
ZFIN|ZDB-GENE-030131-3113 - symbol:pan2 "PAN2 poly(A) spe... 157 1.4e-08 1
UNIPROTKB|Q5F450 - symbol:PAN2 "PAB-dependent poly(A)-spe... 153 4.3e-08 1
WARNING: Descriptions of 17 database sequences were not reported due to the
limiting value of parameter V = 100.
>UNIPROTKB|A0PJM3 [details] [associations]
symbol:REXO1L2P "Putative exonuclease GOR-like protein"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 GO:GO:0003676
GO:GO:0005622 GO:GO:0004527 GO:GO:0090305 eggNOG:COG0847
InterPro:IPR013520 SUPFAM:SSF53098 EMBL:AF279874 IPI:IPI00937866
UniGene:Hs.535056 ProteinModelPortal:A0PJM3 SMR:A0PJM3 PRIDE:A0PJM3
UCSC:uc010mgi.2 GeneCards:GC08M086790 HGNC:HGNC:32239
neXtProt:NX_A0PJM3 HOGENOM:HOG000112759 HOVERGEN:HBG107960
InParanoid:A0PJM3 OrthoDB:EOG4PZJ5X ArrayExpress:A0PJM3
Genevestigator:A0PJM3 Uniprot:A0PJM3
Length = 583
Score = 461 (167.3 bits), Expect = 9.7e-46, Sum P(2) = 9.7e-46
Identities = 93/187 (49%), Positives = 128/187 (68%)
Query: 50 ALDHV-GGINGPLEGYVKTKPRKSPPPNGY-GVYALDTEMVYTVHGLEVARVTVVNVDGR 107
A HV G L+G+V+T +K + Y G+YALD EM YT HGLE+ RVTVV+ D R
Sbjct: 378 AKQHVRDGRKESLDGFVETF-KKELSRDAYPGIYALDCEMCYTTHGLELTRVTVVDADMR 436
Query: 108 LIYNTLVKPDCEIIDYNTKYSGISAKDFIRNPYKTLKDVQNDLMGFVSKDSIIVGHGLEN 167
++Y+T VKPD EI+DYNT++SG++ D + TL VQ L+ F S +I++GH LE+
Sbjct: 437 VVYDTFVKPDNEIVDYNTRFSGVTEADVAKTSI-TLPQVQAILLSFFSAQTILIGHSLES 495
Query: 168 DLRALKLIHSNIIDTSVLFPHSFGLPYRRSLKSIVSQLLHQSIQSGT--HDSFEDARACI 225
DL ALKLIHS ++DT+VLFPH G PY+RSL+++ + L Q IQ H+S EDA AC+
Sbjct: 496 DLLALKLIHSTVVDTAVLFPHYLGFPYKRSLRNLAADYLAQIIQDSQDGHNSSEDANACL 555
Query: 226 DLILWKL 232
L++WK+
Sbjct: 556 QLVMWKV 562
Score = 36 (17.7 bits), Expect = 9.7e-46, Sum P(2) = 9.7e-46
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 10 KRLKAKSLTSMSVWERKSLFRKL 32
KRLK + +SM R +L+ +L
Sbjct: 256 KRLKGLTPSSMPGLSRAALYSRL 278
>MGI|MGI:1914182 [details] [associations]
symbol:Rexo1 "REX1, RNA exonuclease 1 homolog (S.
cerevisiae)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004518 "nuclease activity"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 MGI:MGI:1914182
GO:GO:0005634 GO:GO:0003676 GO:GO:0004527 GO:GO:0090305
eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098 OrthoDB:EOG4PZJ5X
KO:K14570 GeneTree:ENSGT00630000089807 CTD:57455
HOGENOM:HOG000039979 HOVERGEN:HBG090644 OMA:VAYDRSP EMBL:AK173108
EMBL:AK006228 EMBL:AK144769 EMBL:BC039623 EMBL:BC052424
EMBL:BC069964 IPI:IPI00469996 IPI:IPI00759993 RefSeq:NP_080128.2
UniGene:Mm.1116 ProteinModelPortal:Q7TT28 SMR:Q7TT28 IntAct:Q7TT28
PhosphoSite:Q7TT28 PRIDE:Q7TT28 Ensembl:ENSMUST00000057910
GeneID:66932 KEGG:mmu:66932 UCSC:uc007gdq.1 UCSC:uc007gds.1
InParanoid:Q7TT28 NextBio:323057 Bgee:Q7TT28 CleanEx:MM_REXO1
Genevestigator:Q7TT28 GermOnline:ENSMUSG00000047417 Uniprot:Q7TT28
Length = 1213
Score = 473 (171.6 bits), Expect = 1.0e-45, Sum P(2) = 1.0e-45
Identities = 92/189 (48%), Positives = 130/189 (68%)
Query: 50 ALDHV-GGINGPLEGYVKTKPRKSPPPNGYGVYALDTEMVYTVHGLEVARVTVVNVDGRL 108
A HV G LEG+V+T ++ P GV+ALD EM YT +GLE+ RVTVV+ D ++
Sbjct: 1021 AKQHVQDGRKENLEGFVRTFQKELPEDAHAGVFALDCEMSYTTYGLELTRVTVVDTDMQV 1080
Query: 109 IYNTLVKPDCEIIDYNTKYSGISAKDFIRNPYKTLKDVQNDLMGFVSKDSIIVGHGLEND 168
+Y+T VKPD E++DYNT++SG++ D + TL+DVQ L+ S D+I++GH LE+D
Sbjct: 1081 VYDTFVKPDNEVVDYNTRFSGVTEADLVDTSI-TLRDVQAVLLSMFSADTILIGHSLESD 1139
Query: 169 LRALKLIHSNIIDTSVLFPHSFGLPYRRSLKSIVSQLLHQSIQSGT--HDSFEDARACID 226
L ALK+IH ++DTSVLFPH GLPY+RSL+++++ L Q IQ H S EDA AC+
Sbjct: 1140 LLALKVIHGTVVDTSVLFPHRLGLPYKRSLRNLMADYLRQIIQDNVDGHSSSEDASACMH 1199
Query: 227 LILWKLLSD 235
L++WK+ D
Sbjct: 1200 LVIWKIRED 1208
Score = 47 (21.6 bits), Expect = 1.0e-45, Sum P(2) = 1.0e-45
Identities = 23/67 (34%), Positives = 30/67 (44%)
Query: 10 KRLKAKSLTSMSVWERKSLFRKL------PPRT-GFNPVCTSGLRISALDHVGGINGPLE 62
K K KS TS S+ + + +K P R G VCT ++ A + G GP E
Sbjct: 368 KAKKKKSGTSASLSHKDKVRKKDKKKEKDPARPRGKEKVCTDKKKLPASNPRGKAQGP-E 426
Query: 63 GYVKTKP 69
G K KP
Sbjct: 427 G-TKKKP 432
>UNIPROTKB|F5GW92 [details] [associations]
symbol:REXO1L10P "Protein REXO1L10P" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098 IPI:IPI00937866
HGNC:HGNC:32239 KO:K14570 EMBL:AC232323 RefSeq:XP_002342903.1
Ensembl:ENST00000425429 Ensembl:ENST00000540724 GeneID:100288562
KEGG:hsa:100288562 OMA:VIHCTVV NextBio:20778309 Uniprot:F5GW92
Length = 675
Score = 461 (167.3 bits), Expect = 2.2e-45, Sum P(2) = 2.2e-45
Identities = 93/187 (49%), Positives = 128/187 (68%)
Query: 50 ALDHV-GGINGPLEGYVKTKPRKSPPPNGY-GVYALDTEMVYTVHGLEVARVTVVNVDGR 107
A HV G L+G+V+T +K + Y G+YALD EM YT HGLE+ RVTVV+ D R
Sbjct: 470 AKQHVRDGRKESLDGFVETF-KKELSRDAYPGIYALDCEMCYTTHGLELTRVTVVDADMR 528
Query: 108 LIYNTLVKPDCEIIDYNTKYSGISAKDFIRNPYKTLKDVQNDLMGFVSKDSIIVGHGLEN 167
++Y+T VKPD EI+DYNT++SG++ D + TL VQ L+ F S +I++GH LE+
Sbjct: 529 VVYDTFVKPDNEIVDYNTRFSGVTEADVAKTSI-TLPQVQAILLSFFSAQTILIGHSLES 587
Query: 168 DLRALKLIHSNIIDTSVLFPHSFGLPYRRSLKSIVSQLLHQSIQSGT--HDSFEDARACI 225
DL ALKLIHS ++DT+VLFPH G PY+RSL+++ + L Q IQ H+S EDA AC+
Sbjct: 588 DLLALKLIHSTVVDTAVLFPHYLGFPYKRSLRNLAADYLAQIIQDSQDGHNSSEDANACL 647
Query: 226 DLILWKL 232
L++WK+
Sbjct: 648 QLVMWKV 654
Score = 36 (17.7 bits), Expect = 2.2e-45, Sum P(2) = 2.2e-45
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 10 KRLKAKSLTSMSVWERKSLFRKL 32
KRLK + +SM R +L+ +L
Sbjct: 348 KRLKGLTPSSMPGLSRAALYSRL 370
>UNIPROTKB|Q8IX06 [details] [associations]
symbol:REXO1L1 "Exonuclease GOR" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479 Pfam:PF00929
GO:GO:0005634 GO:GO:0005737 GO:GO:0003676 GO:GO:0004527
GO:GO:0090305 eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098
HOGENOM:HOG000112759 HOVERGEN:HBG107960 OrthoDB:EOG4PZJ5X
EMBL:AC093331 EMBL:AF495523 EMBL:AF023669 IPI:IPI00892939
RefSeq:NP_758439.4 UniGene:Hs.373854 ProteinModelPortal:Q8IX06
SMR:Q8IX06 STRING:Q8IX06 PhosphoSite:Q8IX06 DMDM:205831276
PaxDb:Q8IX06 PRIDE:Q8IX06 DNASU:254958 Ensembl:ENST00000379010
GeneID:254958 KEGG:hsa:254958 UCSC:uc022axf.1 CTD:254958
GeneCards:GC08M086568 H-InvDB:HIX0034285 H-InvDB:HIX0168820
H-InvDB:HIX0188684 H-InvDB:HIX0188686 H-InvDB:HIX0188687
H-InvDB:HIX0188688 H-InvDB:HIX0188689 H-InvDB:HIX0188690
HGNC:HGNC:24660 neXtProt:NX_Q8IX06 PharmGKB:PA142671078
InParanoid:Q8IX06 KO:K14570 OMA:RIARIPM GenomeRNAi:254958
NextBio:92431 Bgee:Q8IX06 CleanEx:HS_REXO1L1 Genevestigator:Q8IX06
Uniprot:Q8IX06
Length = 675
Score = 460 (167.0 bits), Expect = 2.9e-45, Sum P(2) = 2.9e-45
Identities = 93/187 (49%), Positives = 128/187 (68%)
Query: 50 ALDHV-GGINGPLEGYVKTKPRKSPPPNGY-GVYALDTEMVYTVHGLEVARVTVVNVDGR 107
A HV G L+G+V+T +K + Y G+YALD EM YT HGLE+ RVTVV+ D R
Sbjct: 470 AKQHVRDGRKESLDGFVETF-KKELSRDAYPGIYALDCEMCYTTHGLELTRVTVVDADMR 528
Query: 108 LIYNTLVKPDCEIIDYNTKYSGISAKDFIRNPYKTLKDVQNDLMGFVSKDSIIVGHGLEN 167
++Y+T VKPD EI+DYNT++SG++ D + TL VQ L+ F S +I++GH LE+
Sbjct: 529 VVYDTFVKPDNEIVDYNTRFSGVTEADVAKTSI-TLPQVQAILLSFFSAQTILIGHSLES 587
Query: 168 DLRALKLIHSNIIDTSVLFPHSFGLPYRRSLKSIVSQLLHQSIQSGT--HDSFEDARACI 225
DL ALKLIHS ++DT+VLFPH G PY+RSL+++ + L Q IQ H+S EDA AC+
Sbjct: 588 DLLALKLIHSTVVDTAVLFPHYLGFPYKRSLRNLAADYLAQIIQDSQDGHNSSEDASACL 647
Query: 226 DLILWKL 232
L++WK+
Sbjct: 648 QLVMWKV 654
Score = 36 (17.7 bits), Expect = 2.9e-45, Sum P(2) = 2.9e-45
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 10 KRLKAKSLTSMSVWERKSLFRKL 32
KRLK + +SM R +L+ +L
Sbjct: 348 KRLKGLTPSSMPGLSRAALYSRL 370
>UNIPROTKB|F1P0Z1 [details] [associations]
symbol:REXO1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00630000089807 OMA:VAYDRSP EMBL:AADN02066720
IPI:IPI00599868 Ensembl:ENSGALT00000001557 Uniprot:F1P0Z1
Length = 1217
Score = 483 (175.1 bits), Expect = 8.2e-45, P = 8.2e-45
Identities = 94/199 (47%), Positives = 142/199 (71%)
Query: 41 VCTSGLRISALDHV-GGINGPLEGYVKTKPRKSPPPNGY-GVYALDTEMVYTVHGLEVAR 98
V ++G ++ A HV G L+G+VKT K P +GY G++ALD EM YT GLE+ R
Sbjct: 1017 VGSAGCQV-AKQHVHDGRKESLDGFVKTF-EKLPTTDGYPGIFALDCEMCYTKQGLELTR 1074
Query: 99 VTVVNVDGRLIYNTLVKPDCEIIDYNTKYSGISAKDFIRNPYKTLKDVQNDLMGFVSKDS 158
VTV+N D +++Y+T VKPD +++DYNT++SG++ +D + N TL+DVQ L+ S D+
Sbjct: 1075 VTVINSDLKVVYDTFVKPDTKVVDYNTRFSGVTEED-LENTSITLRDVQAVLLNMFSADT 1133
Query: 159 IIVGHGLENDLRALKLIHSNIIDTSVLFPHSFGLPYRRSLKSIVSQLLHQSIQSGT--HD 216
I++GH LE+DL ALKLIH ++DT+++FPH GLPY+R+L+++++ L + IQ HD
Sbjct: 1134 ILIGHSLESDLFALKLIHGTVVDTAIVFPHRLGLPYKRALRTLMADYLKRIIQDNVEGHD 1193
Query: 217 SFEDARACIDLILWKLLSD 235
S EDARAC++L++WK+ D
Sbjct: 1194 SSEDARACMELMIWKIKED 1212
>RGD|1564472 [details] [associations]
symbol:RGD1564472 "similar to Transcription elongation factor B
polypeptide 3 binding protein 1" species:10116 "Rattus norvegicus"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479
Pfam:PF00929 RGD:1564472 GO:GO:0003676 GO:GO:0005622 GO:GO:0004527
InterPro:IPR013520 SUPFAM:SSF53098 GeneTree:ENSGT00630000089807
IPI:IPI00767432 Ensembl:ENSRNOT00000049320 Uniprot:F1LWS9
Length = 465
Score = 468 (169.8 bits), Expect = 1.9e-44, P = 1.9e-44
Identities = 97/199 (48%), Positives = 131/199 (65%)
Query: 40 PVCTSGLRISALDHV-GGINGPLEGYVKTKPRKSPPPNGYGVYALDTEMVYTVHGLEVAR 98
P+ +G ++ A HV G L G+ KT P+K + G+YALD EM YT HGLE+ R
Sbjct: 265 PMGATGCKV-AKQHVQDGRKDNLHGFAKTFPKKDWEAHA-GIYALDCEMSYTTHGLELTR 322
Query: 99 VTVVNVDGRLIYNTLVKPDCEIIDYNTKYSGISAKDFIRNPYKTLKDVQNDLMGFVSKDS 158
VTVV+ D +IY+T VKPD EI+DYNT +SG++ D + N L DVQ L+ S ++
Sbjct: 323 VTVVDTDQHVIYDTFVKPDNEIVDYNTMFSGVTETD-LANTRVRLCDVQAVLLSLFSTET 381
Query: 159 IIVGHGLENDLRALKLIHSNIIDTSVLFPHSFGLPYRRSLKSIVSQLLHQSIQ--SGTHD 216
I++GH LE+DL ALK IH ++DTSVLFPH G P++RSL+ + SQ L++ IQ SG H
Sbjct: 382 ILIGHSLESDLLALKFIHGTVVDTSVLFPHHRGPPFKRSLRGLTSQYLNRIIQTDSGGHS 441
Query: 217 SFEDARACIDLILWKLLSD 235
S EDA AC+ L+ WK+ D
Sbjct: 442 SIEDATACMQLVTWKIQED 460
>ZFIN|ZDB-GENE-030131-1650 [details] [associations]
symbol:rexo1 "REX1, RNA exonuclease 1 homolog (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0004527 "exonuclease
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929
ZFIN:ZDB-GENE-030131-1650 GO:GO:0003676 GO:GO:0005622 GO:GO:0004527
InterPro:IPR013520 SUPFAM:SSF53098 KO:K14570
GeneTree:ENSGT00630000089807 CTD:57455 HOGENOM:HOG000039979
HOVERGEN:HBG090644 OMA:GGWETSY EMBL:BX511253 IPI:IPI00896271
RefSeq:NP_001119888.1 UniGene:Dr.64589 Ensembl:ENSDART00000079618
GeneID:564551 KEGG:dre:564551 NextBio:20885442 Uniprot:B0S6F3
Length = 1207
Score = 475 (172.3 bits), Expect = 5.8e-44, P = 5.8e-44
Identities = 91/186 (48%), Positives = 132/186 (70%)
Query: 53 HV-GGINGPLEGYVKTKPRKSPPPNGYGVYALDTEMVYTVHGLEVARVTVVNVDGRLIYN 111
HV G L+G+VKT + P GVYALD EM YT GLE+ RVTV+N + +++Y+
Sbjct: 1018 HVQDGRKESLDGFVKTFSKPLPVDGNAGVYALDCEMCYTKQGLELTRVTVINSELKVVYD 1077
Query: 112 TLVKPDCEIIDYNTKYSGISAKDFIRNPYKTLKDVQNDLMGFVSKDSIIVGHGLENDLRA 171
T VKP ++DYNT++SG++A D + N +L+DVQ L+ S DSI++GH LE+DL A
Sbjct: 1078 TFVKPGSRVVDYNTRFSGVTADD-LENTTISLRDVQAVLLSMFSADSILIGHSLESDLFA 1136
Query: 172 LKLIHSNIIDTSVLFPHSFGLPYRRSLKSIVSQLLHQSIQS--GTHDSFEDARACIDLIL 229
LKLIHS ++DT+++FPH GLPY+R+L+++++ L + IQ G HDS EDARAC++L++
Sbjct: 1137 LKLIHSMVVDTAIVFPHRLGLPYKRALRNLMADYLKRIIQDNVGGHDSSEDARACMELMI 1196
Query: 230 WKLLSD 235
WK+ D
Sbjct: 1197 WKIKED 1202
>FB|FBgn0261548 [details] [associations]
symbol:CG42666 species:7227 "Drosophila melanogaster"
[GO:0004527 "exonuclease activity" evidence=ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479
Pfam:PF00929 EMBL:AE014298 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00630000089807 FlyBase:FBgn0261548 UniGene:Dm.19
GeneID:31136 KEGG:dme:Dmel_CG42666 GenomeRNAi:31136 NextBio:772085
EMBL:AY069617 RefSeq:NP_569945.1 SMR:Q8T023
EnsemblMetazoa:FBtr0302654 UCSC:CG14801-RB InParanoid:Q8T023
Uniprot:Q8T023
Length = 787
Score = 467 (169.5 bits), Expect = 1.1e-43, P = 1.1e-43
Identities = 93/198 (46%), Positives = 134/198 (67%)
Query: 39 NPVCTSGLRISALDHVGGINGPLEGYVKTKPRKSPPPNGYGVYALDTEMVYTVHGLEVAR 98
+P C G R V G+NGP +V+T+ R S VYALD EM YT GL+V +
Sbjct: 580 SPGCCLGDRHVWSGSVVGVNGPYYDFVRTEHRGSGEDEP-AVYALDCEMSYTGRGLDVTK 638
Query: 99 VTVVNVDGRLIYNTLVKPDCEIIDYNTKYSGISAKDFIRNPYKTLKDVQNDLMGFVSKDS 158
V++V ++G+L+Y V+P C+IIDYNT+YSGI+ D K+L +VQ DL+ ++ D+
Sbjct: 639 VSLVALNGQLVYEHFVRPVCDIIDYNTQYSGITETDLCSGA-KSLAEVQRDLLQLITADT 697
Query: 159 IIVGHGLENDLRALKLIHSNIIDTSVLFPHSFGLPYRRSLKSIVSQLLHQSIQSGT---- 214
I++GHGLENDLRAL+L+H+ +IDTS+ FPH G PYRR+L+ + L + IQ+G
Sbjct: 698 ILIGHGLENDLRALRLVHNTLIDTSISFPHCNGFPYRRALRHLTKVHLKRDIQAGDGTTG 757
Query: 215 HDSFEDARACIDLILWKL 232
H SFED+RAC++L+LW++
Sbjct: 758 HSSFEDSRACMELMLWRV 775
>UNIPROTKB|Q8N1G1 [details] [associations]
symbol:REXO1 "RNA exonuclease 1 homolog" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479 Pfam:PF00929
GO:GO:0005634 GO:GO:0003676 GO:GO:0004527 GO:GO:0090305
eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098 EMBL:AC012615
OrthoDB:EOG4PZJ5X KO:K14570 EMBL:AB032964 EMBL:BC032244
IPI:IPI00297396 RefSeq:NP_065746.3 UniGene:Hs.192477
ProteinModelPortal:Q8N1G1 SMR:Q8N1G1 IntAct:Q8N1G1
MINT:MINT-1401484 STRING:Q8N1G1 PhosphoSite:Q8N1G1 DMDM:296452990
PaxDb:Q8N1G1 PRIDE:Q8N1G1 Ensembl:ENST00000170168 GeneID:57455
KEGG:hsa:57455 UCSC:uc002lua.4 CTD:57455 GeneCards:GC19M001815
H-InvDB:HIX0014594 H-InvDB:HIX0027481 HGNC:HGNC:24616 HPA:HPA042155
HPA:HPA042552 MIM:609614 neXtProt:NX_Q8N1G1 PharmGKB:PA142671077
HOGENOM:HOG000039979 HOVERGEN:HBG090644 InParanoid:Q8N1G1
OMA:VAYDRSP GenomeRNAi:57455 NextBio:63632 ArrayExpress:Q8N1G1
Bgee:Q8N1G1 CleanEx:HS_REXO1 Genevestigator:Q8N1G1
GermOnline:ENSG00000079313 Uniprot:Q8N1G1
Length = 1221
Score = 471 (170.9 bits), Expect = 1.6e-43, P = 1.6e-43
Identities = 94/189 (49%), Positives = 130/189 (68%)
Query: 50 ALDHV-GGINGPLEGYVKTKPRKSPPPNGYGVYALDTEMVYTVHGLEVARVTVVNVDGRL 108
A HV G LEG+VKT ++ G+YALD EM YT +GLE+ RVTVV+ D +
Sbjct: 1029 AKQHVQDGRKERLEGFVKTFEKELSGDTHPGIYALDCEMSYTTYGLELTRVTVVDTDVHV 1088
Query: 109 IYNTLVKPDCEIIDYNTKYSGISAKDFIRNPYKTLKDVQNDLMGFVSKDSIIVGHGLEND 168
+Y+T VKPD EI+DYNT++SG++ D + + TL+DVQ L+ S D+I++GH LE+D
Sbjct: 1089 VYDTFVKPDNEIVDYNTRFSGVTEAD-LADTSVTLRDVQAVLLSMFSADTILIGHSLESD 1147
Query: 169 LRALKLIHSNIIDTSVLFPHSFGLPYRRSLKSIVSQLLHQSIQSGT--HDSFEDARACID 226
L ALK+IHS ++DTSVLFPH GLPY+RSL+++++ L Q IQ H S EDA AC+
Sbjct: 1148 LLALKVIHSTVVDTSVLFPHRLGLPYKRSLRNLMADYLRQIIQDNVDGHSSSEDAGACMH 1207
Query: 227 LILWKLLSD 235
L++WK+ D
Sbjct: 1208 LVIWKVRED 1216
>UNIPROTKB|E2QX02 [details] [associations]
symbol:REXO1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 GO:GO:0003676
GO:GO:0005622 GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00630000089807 OMA:VAYDRSP EMBL:AAEX03012623
EMBL:AAEX03012624 Ensembl:ENSCAFT00000030942 Uniprot:E2QX02
Length = 1208
Score = 469 (170.2 bits), Expect = 2.5e-43, P = 2.5e-43
Identities = 93/196 (47%), Positives = 136/196 (69%)
Query: 43 TSGLRISALDHV-GGINGPLEGYVKTKPRKSPPPNGYGVYALDTEMVYTVHGLEVARVTV 101
++G ++ A HV G LEG+VKT ++ G+YALD EM YT +GLE+ RVTV
Sbjct: 1010 STGCQV-AKQHVQDGRKENLEGFVKTFDKELSEDAHPGIYALDCEMSYTTYGLELTRVTV 1068
Query: 102 VNVDGRLIYNTLVKPDCEIIDYNTKYSGISAKDFIRNPYKTLKDVQNDLMGFVSKDSIIV 161
V+ D +++Y+T VKPD EI+DYNT++SG++ D + + +L+DVQ L+ S D++++
Sbjct: 1069 VDTDMQVVYDTFVKPDNEIVDYNTRFSGVTEAD-LADTSISLRDVQAVLLSMFSADTVLI 1127
Query: 162 GHGLENDLRALKLIHSNIIDTSVLFPHSFGLPYRRSLKSIVSQLLHQSIQSGT--HDSFE 219
GH LE+DL ALK+IHS ++DTSVLFPH GLPY+RSL+++++ L Q IQ H S E
Sbjct: 1128 GHSLESDLLALKVIHSTVVDTSVLFPHRLGLPYKRSLRNLMADYLRQIIQDNVDGHSSSE 1187
Query: 220 DARACIDLILWKLLSD 235
DA AC+ L++WK+ D
Sbjct: 1188 DASACMHLVIWKIRED 1203
>UNIPROTKB|F1P8U5 [details] [associations]
symbol:F1P8U5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 GO:GO:0003676
GO:GO:0005622 GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00630000089807 EMBL:AAEX03007922 OMA:FAVNCEV
Ensembl:ENSCAFT00000002678 Uniprot:F1P8U5
Length = 369
Score = 456 (165.6 bits), Expect = 3.5e-43, P = 3.5e-43
Identities = 89/197 (45%), Positives = 141/197 (71%)
Query: 43 TSGLRISALDHVGGINGPLEGYVKTKPRKSPPPNGY-GVYALDTEMVYTVHGLEVARVTV 101
++G +++ L HV ++G+VKT KSPPP+G GV+A++ E+ YT GLE+ +VTV
Sbjct: 173 SAGCQVAKL-HVHDQKENIKGFVKTFV-KSPPPDGNPGVFAVNCEVCYTAKGLELTQVTV 230
Query: 102 VNVDGRLIYNTLVKPDCEIIDYNTKYSGISAKDFIRNPYKTLKDVQNDLMGFVSKDSIIV 161
V+ +++Y+T VKPD E+IDYNT+ SG+ +D ++N +++DVQ L+ S D++++
Sbjct: 231 VDPSLQVVYDTFVKPDDEVIDYNTRLSGV-VEDDLKNTKTSIRDVQAILLNLFSADTVLI 289
Query: 162 GHGLENDLRALKLIHSNIIDTSVLFPHSFGLPYRRSLKSIVSQLLHQSIQSGTHD-SFED 220
GH E+ L ALKLIHS+++DT++LFPH GLP++RSLKS+V+ L + IQ H+ S E+
Sbjct: 290 GHSFEHSLYALKLIHSSVVDTTILFPHRLGLPHKRSLKSLVADYLQRIIQDDDHNNSSEN 349
Query: 221 ARACIDLILWKLLSDFR 237
A AC++L+LWK+ D +
Sbjct: 350 ATACMELVLWKVKEDLK 366
>UNIPROTKB|F1SDH3 [details] [associations]
symbol:LOC100525449 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005622 "intracellular" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098 KO:K14570
GeneTree:ENSGT00630000089807 OMA:VAYDRSP EMBL:FP236669
EMBL:FP102751 RefSeq:XP_003123050.1 RefSeq:XP_003123064.2
UniGene:Ssc.70280 Ensembl:ENSSSCT00000014685
Ensembl:ENSSSCT00000014691 GeneID:100513338 GeneID:100525449
KEGG:ssc:100513338 KEGG:ssc:100525449 Uniprot:F1SDH3
Length = 1211
Score = 467 (169.5 bits), Expect = 4.2e-43, P = 4.2e-43
Identities = 93/196 (47%), Positives = 136/196 (69%)
Query: 43 TSGLRISALDHV-GGINGPLEGYVKTKPRKSPPPNGYGVYALDTEMVYTVHGLEVARVTV 101
++G ++ A HV G LEG+VKT ++ G+YALD EM YT +GLE+ RVTV
Sbjct: 1013 STGCQV-AKQHVQDGRKESLEGFVKTFEKELSGDAHPGIYALDCEMSYTTYGLELTRVTV 1071
Query: 102 VNVDGRLIYNTLVKPDCEIIDYNTKYSGISAKDFIRNPYKTLKDVQNDLMGFVSKDSIIV 161
V+ D +++Y+T V+PD EI+DYNT++SG++ D + + +L+DVQ L+ S D+I++
Sbjct: 1072 VDTDLQVVYDTFVRPDNEIVDYNTRFSGVTEAD-LADTSISLRDVQAVLLSMFSSDTILI 1130
Query: 162 GHGLENDLRALKLIHSNIIDTSVLFPHSFGLPYRRSLKSIVSQLLHQSIQSGT--HDSFE 219
GH LE+DL ALK+IHS ++DTSVLFPH GLPY+RSL+++++ L Q IQ H S E
Sbjct: 1131 GHSLESDLLALKVIHSTVVDTSVLFPHRLGLPYKRSLRNLMADYLRQIIQDNVDGHSSSE 1190
Query: 220 DARACIDLILWKLLSD 235
DA AC+ L++WK+ D
Sbjct: 1191 DASACMHLVIWKIRED 1206
>UNIPROTKB|E1BDF8 [details] [associations]
symbol:LOC788506 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0005634 GO:GO:0003676
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098 KO:K14570
GeneTree:ENSGT00630000089807 CTD:57455 OMA:VAYDRSP
EMBL:DAAA02020285 IPI:IPI00700340 RefSeq:NP_001179237.1
UniGene:Bt.25942 Ensembl:ENSBTAT00000026945 GeneID:512048
KEGG:bta:512048 NextBio:20870228 Uniprot:E1BDF8
Length = 1211
Score = 458 (166.3 bits), Expect = 3.8e-42, P = 3.8e-42
Identities = 91/196 (46%), Positives = 135/196 (68%)
Query: 43 TSGLRISALDHV-GGINGPLEGYVKTKPRKSPPPNGYGVYALDTEMVYTVHGLEVARVTV 101
++G ++ A HV G LEG+VKT ++ GVYALD EM YT +GLE+ RVTV
Sbjct: 1013 STGCQV-AKQHVQDGRKENLEGFVKTFEKELSGDAHPGVYALDCEMSYTTYGLELTRVTV 1071
Query: 102 VNVDGRLIYNTLVKPDCEIIDYNTKYSGISAKDFIRNPYKTLKDVQNDLMGFVSKDSIIV 161
V+ D +++Y+T V+PD EI+DYNT++SG++ D + + +L+DVQ L+ S D++++
Sbjct: 1072 VDTDLQVVYDTFVRPDNEIVDYNTRFSGVTEAD-LADTSISLRDVQAVLLSMFSSDTVLI 1130
Query: 162 GHGLENDLRALKLIHSNIIDTSVLFPHSFGLPYRRSLKSIVSQLLHQSIQSGT--HDSFE 219
GH LE+DL L++IHS ++DTSVLFPH GLPY+RSL+++++ L Q IQ H S E
Sbjct: 1131 GHSLESDLLCLQVIHSTVVDTSVLFPHRLGLPYKRSLRNLMADYLRQIIQDNVDGHSSSE 1190
Query: 220 DARACIDLILWKLLSD 235
DA AC+ L++WK+ D
Sbjct: 1191 DASACMHLVIWKIRED 1206
>ZFIN|ZDB-GENE-061013-448 [details] [associations]
symbol:zgc:152968 "zgc:152968" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479
Pfam:PF00929 ZFIN:ZDB-GENE-061013-448 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00630000089807 EMBL:CR762466 IPI:IPI00870950
ProteinModelPortal:B8JII5 Ensembl:ENSDART00000139636
HOVERGEN:HBG106838 OMA:DPMEECY ArrayExpress:B8JII5 Bgee:B8JII5
Uniprot:B8JII5
Length = 1251
Score = 449 (163.1 bits), Expect = 3.7e-41, P = 3.7e-41
Identities = 88/199 (44%), Positives = 137/199 (68%)
Query: 39 NPVCTSGLRISALDHVGGINGPLEGYVKTKPRKSPPPNGYGVYALDTEMVYTVHGLEVAR 98
N V + G ++ L HV L+G+V + + + G+YA+DT+ YT GLE+AR
Sbjct: 1050 NAVGSPGCQVFNL-HVHDAVS-LQGFVSSLHQSAVGKTCPGIYAIDTQTCYTTQGLELAR 1107
Query: 99 VTVVNVDGRLIYNTLVKPDCEIIDYNTKYSGISAKDFIRNPYKTLKDVQNDLMGFVSKDS 158
VTVV+ ++++++ VKPD ++IDYNT++SGIS D +++ +L+DVQ L+ F++ D+
Sbjct: 1108 VTVVSSSLQVVFDSFVKPDNDVIDYNTRFSGISEAD-VKSSSSSLRDVQAVLLSFINADT 1166
Query: 159 IIVGHGLENDLRALKLIHSNIIDTSVLFPHSFGLPYRRSLKSIVSQLLHQSIQSGT--HD 216
I++GHGLENDL ALK+IHS ++DTSV+FPH GLP++R L S+ + L + IQ HD
Sbjct: 1167 ILIGHGLENDLAALKIIHSTVVDTSVVFPHRLGLPHKRELNSLTADYLRRIIQESVEGHD 1226
Query: 217 SFEDARACIDLILWKLLSD 235
+ EDA AC++L+LW++ D
Sbjct: 1227 TREDATACMELMLWRVKED 1245
>UNIPROTKB|I3LLP7 [details] [associations]
symbol:I3LLP7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005622 "intracellular" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 GO:GO:0003676 GO:GO:0005622 GO:GO:0004527
SUPFAM:SSF53098 GeneTree:ENSGT00630000089807 EMBL:CU571150
Ensembl:ENSSSCT00000025893 OMA:QKKRIAH Uniprot:I3LLP7
Length = 999
Score = 437 (158.9 bits), Expect = 4.4e-40, P = 4.4e-40
Identities = 92/203 (45%), Positives = 139/203 (68%)
Query: 41 VCTSGLRISALDHVGGINGPLEGYVKTKPRKSPPPNG-YGVYALDTEMVYTVHGLEVARV 99
V + G +++ L HV LEG+VKT K PPP+G + V+A++ +M YT GLE+ V
Sbjct: 797 VGSPGCQVAKL-HVHDQKENLEGFVKTFV-KFPPPDGNHRVFAVNCQMCYTAKGLELTHV 854
Query: 100 TVVNVDGRLIYNTLVKPDCEIIDYNTK--YSGISAKDFIRNPYKTLKDVQNDLMGFVSKD 157
TVV+ +++Y+T VKPD EIIDYNT+ +SG+ D ++N ++ DVQ L+ S D
Sbjct: 855 TVVDSSLQVVYDTFVKPDEEIIDYNTRSRFSGVVEND-LKNTKTSICDVQAILLNLFSAD 913
Query: 158 SIIVGHGLENDLRALKLIHSNIIDTSVLFPHSFGLPYRRSLKSIVSQLLHQSIQS---GT 214
+I++GH E+ L ALKLIH++++DT+V+FPH GLP++RSLKS+V+ L + IQ G
Sbjct: 914 TILIGHSFEHSLYALKLIHTSVVDTTVMFPHRLGLPHKRSLKSLVADYLQRIIQDDGFGG 973
Query: 215 HDSFEDARACIDLILWKLLSDFR 237
H+S E+A AC++L+LWK+ D +
Sbjct: 974 HNSSENATACMELVLWKVKDDLK 996
>UNIPROTKB|F1N3K9 [details] [associations]
symbol:LOC100335177 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005622 "intracellular" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00630000089807 EMBL:DAAA02022135 EMBL:DAAA02022136
IPI:IPI00687563 Ensembl:ENSBTAT00000048722 OMA:FAVNCEV
Uniprot:F1N3K9
Length = 387
Score = 421 (153.3 bits), Expect = 1.8e-39, P = 1.8e-39
Identities = 87/190 (45%), Positives = 125/190 (65%)
Query: 50 ALDHVGGINGPLEGYVKTKPRKSPPPNGYGVYALDTEMVYTVHGLEVARVTVVNVDGRLI 109
A HV L G+VKT + V+A+ E YT GLE RVTVV+ +++
Sbjct: 196 AKHHVHNQKENLGGFVKTLVKFPALDRNPCVFAMSCEACYTAKGLEPTRVTVVDPSLQVV 255
Query: 110 YNTLVKPDCEIIDYNTKYSGISAKDFIRNPYKTLKDVQNDLMGFVSKDSIIVGHGLENDL 169
Y+T VKPD E+IDYNT++SG+ A+D ++N +++DVQ L+ S D+I++GH E+ L
Sbjct: 256 YDTFVKPDEEVIDYNTRFSGV-AEDDLKNMKTSVRDVQAILLNLFSADTILIGHSFEHSL 314
Query: 170 RALKLIHSNIIDTSVLFPHSFGLPYRRSLKSIVSQLLHQSIQS--GTHDSFEDARACIDL 227
ALKLIH++I+DT+VLFPH GLP+RRSLK +V+ L + IQ G H S E+A AC++L
Sbjct: 315 YALKLIHTSIVDTTVLFPHPLGLPHRRSLKGLVADYLQRVIQDEVGGHSSSENATACMEL 374
Query: 228 ILWKLLSDFR 237
+LWK+ D +
Sbjct: 375 VLWKVNDDLK 384
>FB|FBgn0039544 [details] [associations]
symbol:CG12877 species:7227 "Drosophila melanogaster"
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479
Pfam:PF00929 EMBL:AE014297 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098
KO:K14570 GeneTree:ENSGT00630000089807 EMBL:BT133134
RefSeq:NP_001034073.1 UniGene:Dm.14943 SMR:Q2PDP6
EnsemblMetazoa:FBtr0100446 GeneID:43333 KEGG:dme:Dmel_CG12877
UCSC:CG12877-RC FlyBase:FBgn0039544 OMA:GGWETSY OrthoDB:EOG4FTTFN
GenomeRNAi:43333 NextBio:833402 Uniprot:Q2PDP6
Length = 991
Score = 418 (152.2 bits), Expect = 4.9e-39, Sum P(2) = 4.9e-39
Identities = 89/185 (48%), Positives = 120/185 (64%)
Query: 53 HVGGINGP--LEGYVKTKPRKSP-PPNGYGVYALDTEMVYTVHGLEVARVTVVNVDGRLI 109
HV P L +VKT R P +YALD EM YT HG+E+ RVTVV+++GR +
Sbjct: 803 HVSDYYDPEKLTCFVKTIERGEEFVPTKKDIYALDCEMCYTTHGIELTRVTVVDINGRSV 862
Query: 110 YNTLVKPDCEIIDYNTKYSGISAKDFIRNPYKTLKDVQNDLMGFVSKDSIIVGHGLENDL 169
Y+ LVKPD +I+DYNT YSGI+ + + N +T++DVQ LM +++VGH LE+DL
Sbjct: 863 YDALVKPDNQIVDYNTTYSGIT-EAMLSNETRTIRDVQAVLMSMFHAKTVLVGHSLESDL 921
Query: 170 RALKLIHSNIIDTSVLFPHSFGLPYRRSLKSIVSQLLHQSIQSGT--HDSFEDARACIDL 227
+ALKLIH ++DTSVLFPH G P +R+LK++ + L + IQ HDS EDA CI L
Sbjct: 922 KALKLIHDVVVDTSVLFPHKMGPPKKRALKTLCIENLKRIIQESEAGHDSAEDAEVCIQL 981
Query: 228 ILWKL 232
I + L
Sbjct: 982 IKYYL 986
Score = 36 (17.7 bits), Expect = 4.9e-39, Sum P(2) = 4.9e-39
Identities = 8/26 (30%), Positives = 16/26 (61%)
Query: 2 KRRRRSDEKRLKAKSLTSMSVWERKS 27
++ SD++R K ++ +S S + KS
Sbjct: 233 RKSSHSDKERSKERNTSSSSSSKHKS 258
>SGD|S000003508 [details] [associations]
symbol:RNH70 "3'-5' exoribonuclease" species:4932
"Saccharomyces cerevisiae" [GO:0005634 "nucleus" evidence=IEA;IDA]
[GO:0004518 "nuclease activity" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0008033 "tRNA processing"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0034415 "tRNA 3'-trailer cleavage, exonucleolytic"
evidence=IGI;IMP] [GO:0008408 "3'-5' exonuclease activity"
evidence=ISS] [GO:0000175 "3'-5'-exoribonuclease activity"
evidence=IMP] [GO:0003723 "RNA binding" evidence=IEA] [GO:0006364
"rRNA processing" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0034476 "U5 snRNA 3'-end processing"
evidence=IGI] [GO:0000467 "exonucleolytic trimming to generate
mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IGI] [GO:0002107
"generation of mature 3'-end of 5S rRNA generated by RNA polymerase
III" evidence=IMP] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 SGD:S000003508 Pfam:PF00929
GO:GO:0005634 EMBL:BK006941 GO:GO:0003723 eggNOG:COG0847
InterPro:IPR013520 SUPFAM:SSF53098 GO:GO:0000175 EMBL:Z73062
GO:GO:0000467 EMBL:X84098 KO:K14570 GO:GO:0034476
GeneTree:ENSGT00630000089807 EMBL:Z73061 PIR:S64609
RefSeq:NP_011792.1 ProteinModelPortal:P53331 SMR:P53331
DIP:DIP-5564N IntAct:P53331 MINT:MINT-551078 STRING:P53331
PaxDb:P53331 PeptideAtlas:P53331 EnsemblFungi:YGR276C GeneID:853193
KEGG:sce:YGR276C CYGD:YGR276c HOGENOM:HOG000065977
OrthoDB:EOG4MKRQF NextBio:973350 Genevestigator:P53331
GermOnline:YGR276C GO:GO:0002107 GO:GO:0034415 Uniprot:P53331
Length = 553
Score = 383 (139.9 bits), Expect = 1.9e-35, P = 1.9e-35
Identities = 70/162 (43%), Positives = 109/162 (67%)
Query: 77 GYGVYALDTEMVYTVHGLEVARVTVVNVDGRLIYNTLVKPDCEIIDYNTKYSGISAKDFI 136
G ++ALD EM + GL + R+++VN D +IY LVKPD I+DY T+YSGI+ +
Sbjct: 222 GSHIFALDCEMCLSEQGLVLTRISLVNFDNEVIYEELVKPDVPIVDYLTRYSGITEEKLT 281
Query: 137 RNPYKTLKDVQNDLMGFVSKDSIIVGHGLENDLRALKLIHSNIIDTSVLFPHSFGLPYRR 196
KTL++VQ DL+ +S+ I++GH L+NDL+ +KL H ++DT++++ H G P++
Sbjct: 282 VGAKKTLREVQKDLLKIISRSDILIGHSLQNDLKVMKLKHPLVVDTAIIYHHKAGDPFKP 341
Query: 197 SLKSIVSQLLHQSIQSGTHDSFEDARACIDLILWKLLSDFRY 238
SLK + L++SIQ+G HDS EDARAC++L K+L+ +
Sbjct: 342 SLKYLSETFLNKSIQNGEHDSVEDARACLELTKLKILNGLAF 383
>TAIR|locus:2145244 [details] [associations]
symbol:AT5G25800 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] InterPro:IPR006055 InterPro:IPR012337
InterPro:IPR017849 SMART:SM00479 Pfam:PF00929 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003676 GO:GO:0004527
GO:GO:0090305 eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098
Gene3D:3.40.720.10 EMBL:AC005405 KO:K14570 EMBL:AY128370
IPI:IPI00537859 IPI:IPI00915141 RefSeq:NP_197952.2 UniGene:At.30891
ProteinModelPortal:Q8L7M4 SMR:Q8L7M4 PaxDb:Q8L7M4 PRIDE:Q8L7M4
EnsemblPlants:AT5G25800.1 GeneID:832649 KEGG:ath:AT5G25800
TAIR:At5g25800 HOGENOM:HOG000244006 OMA:KETILVG PhylomeDB:Q8L7M4
ProtClustDB:CLSN2681069 Genevestigator:Q8L7M4 Uniprot:Q8L7M4
Length = 567
Score = 341 (125.1 bits), Expect = 1.7e-30, P = 1.7e-30
Identities = 73/166 (43%), Positives = 105/166 (63%)
Query: 69 PRKSPPPNGYGVYALDTEMVYTVHGLEVARVTVVNVDGRLIYNTLVKPDCEIIDYNTKYS 128
P S PP + ALD EM T GLE+ RVT+V++ G+++ + LV P I DYNT+YS
Sbjct: 207 PSGSCPPE---IVALDCEMCITKEGLELTRVTLVDIQGQVLLDKLVMPTNPITDYNTRYS 263
Query: 129 GISAKDFIRNPYKTLKDVQNDLMGFVSKDSIIVGHGLENDLRALKLIHSNIIDTSVLFPH 188
GI+A + TLKD+Q + + V K++I+VGH LENDL +LK+ H+ +IDT+VL+ H
Sbjct: 264 GITAV-MMEGVTTTLKDIQEEFLKLVFKETILVGHSLENDLLSLKISHNLVIDTAVLYKH 322
Query: 189 SFGLPYRRSLKSIVSQLLHQSIQSGT--HDSFEDARACIDLILWKL 232
G Y+ L+ + + L + IQ HDS EDA+A +DL L K+
Sbjct: 323 PHGRSYKTKLRILAKKFLAREIQESESGHDSAEDAKAAMDLALLKI 368
>POMBASE|SPAC637.09 [details] [associations]
symbol:SPAC637.09 "ribonuclease H70 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0000467
"exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA
from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0006396
"RNA processing" evidence=ISO] [GO:0008408 "3'-5' exonuclease
activity" evidence=ISO] [GO:0034415 "tRNA 3'-trailer cleavage,
exonucleolytic" evidence=ISO] [GO:0034476 "U5 snRNA 3'-end
processing" evidence=ISO] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 PomBase:SPAC637.09 Pfam:PF00929 GO:GO:0005634
EMBL:CU329670 GO:GO:0003676 eggNOG:COG0847 InterPro:IPR013520
SUPFAM:SSF53098 GO:GO:0008408 GO:GO:0000467 GO:GO:0034476
OrthoDB:EOG4MKRQF GO:GO:0034415 PIR:T39001 RefSeq:NP_594627.2
STRING:O94443 EnsemblFungi:SPAC637.09.1 GeneID:2543505
HOGENOM:HOG000165759 NextBio:20804515 Uniprot:O94443
Length = 631
Score = 327 (120.2 bits), Expect = 9.2e-29, P = 9.2e-29
Identities = 71/164 (43%), Positives = 108/164 (65%)
Query: 72 SPPPNGYGVYALDTEMVYTVHGLEVARVTVVNVDGRLIYNTLVKPDCEIIDYNTKYSGIS 131
SPP N + A+D EMV T +GLE+ARVT+V++ +IY+ VKP+ + DY T+YSGI+
Sbjct: 269 SPPINPK-ILAIDCEMVRTENGLEIARVTIVDMKSEVIYDEFVKPESPVTDYVTQYSGIT 327
Query: 132 AKDFIRNPYKTLKDVQNDLMGFVSKDSIIVGHGLENDLRALKLIHSNIIDTSVLFPHSFG 191
++ +RN L DVQ+ L V +++++GH L +DL LK H +IIDT+ ++ H+ G
Sbjct: 328 -EEKLRNVTTVLSDVQSYLKKTVDNNTVLLGHSLNSDLNCLKFTHPHIIDTANIYNHTRG 386
Query: 192 LPYRRSLKSIVSQLLHQSIQ-SGT--HDSFEDARACIDLILWKL 232
P + SLK + ++ L + IQ +G HDS EDA AC+DL+ K+
Sbjct: 387 PPSKPSLKWLATKWLRREIQKAGALGHDSAEDALACVDLLKLKV 430
>POMBASE|SPAC1782.08c [details] [associations]
symbol:rex3 "exonuclease Rex3 (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0000467 "exonucleolytic trimming to
generate mature 3'-end of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0006396
"RNA processing" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008408 "3'-5' exonuclease activity"
evidence=ISO] [GO:0034476 "U5 snRNA 3'-end processing"
evidence=ISO] [GO:0043628 "ncRNA 3'-end processing" evidence=ISO]
InterPro:IPR000571 InterPro:IPR006055 InterPro:IPR012337
PROSITE:PS50103 SMART:SM00479 PomBase:SPAC1782.08c Pfam:PF00929
GO:GO:0005739 GO:GO:0005634 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 eggNOG:COG0847
InterPro:IPR013520 SUPFAM:SSF53098 GO:GO:0008408 GO:GO:0000467
GO:GO:0034476 PIR:T50098 RefSeq:NP_594715.1
ProteinModelPortal:Q9P7H2 EnsemblFungi:SPAC1782.08c.1
GeneID:2542165 KEGG:spo:SPAC1782.08c OMA:CETANSK OrthoDB:EOG48KVM8
NextBio:20803237 Uniprot:Q9P7H2
Length = 540
Score = 307 (113.1 bits), Expect = 1.5e-28, Sum P(2) = 1.5e-28
Identities = 65/159 (40%), Positives = 104/159 (65%)
Query: 82 ALDTEMVYTVHGLEVARVTVVNVDGRLIYNTLVKPDCEIIDYNTKYSGI-SAKDFIRNPY 140
ALD E+ YT +G+E+AR+TVV + +I + +KP +I+ NT++SGI AK+
Sbjct: 384 ALDCELCYTTNGMELARLTVVAKES-IIMDVFIKPKGKILSLNTRFSGIHDAKELESGIT 442
Query: 141 KTLKDVQNDLMGFVSKDSIIVGHGLENDLRALKLIHSNIIDTSVLFPHSFGLPYRRSLKS 200
++ +G ++K++I++GHGLENDL A++LIH +IDT++LF H+ G P+R SLK
Sbjct: 443 MDQMYIKIKELG-MNKNTILIGHGLENDLNAMRLIHKRVIDTALLFTHARGPPFRYSLKY 501
Query: 201 IVSQLLHQSIQSGTHDSFEDARACIDLILWKLLSDFRYN 239
+ + L +IQ+ THDS EDA + + L+ +K S+ N
Sbjct: 502 LTKKYLGTTIQTSTHDSEEDAVSALQLVFYKTKSNESQN 540
Score = 37 (18.1 bits), Expect = 1.5e-28, Sum P(2) = 1.5e-28
Identities = 8/14 (57%), Positives = 9/14 (64%)
Query: 61 LEGYVKTKPRKSPP 74
+EGY K K KS P
Sbjct: 47 VEGYPKVKIEKSLP 60
>ASPGD|ASPL0000067196 [details] [associations]
symbol:AN7566 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004527 "exonuclease activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479 Pfam:PF00929
GO:GO:0003676 GO:GO:0005622 EMBL:AACD01000129 EMBL:BN001304
GO:GO:0004527 eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098
KO:K14570 OrthoDB:EOG4MKRQF HOGENOM:HOG000165759 RefSeq:XP_680835.1
ProteinModelPortal:Q5AVW4 EnsemblFungi:CADANIAT00000673
GeneID:2869567 KEGG:ani:AN7566.2 OMA:WARMREL Uniprot:Q5AVW4
Length = 723
Score = 321 (118.1 bits), Expect = 6.1e-28, P = 6.1e-28
Identities = 71/158 (44%), Positives = 99/158 (62%)
Query: 77 GYGVYALDTEMVYTVHGL-EVARVTVVNVDGRLIYNTLVKPDCEIIDYNTKYSGISAKDF 135
G V ALD EM T G E+ R+++V DG ++ + LVKP +IDY T++SGI+ K+
Sbjct: 342 GRDVLALDCEMCITEGGSSELTRISLVRWDGEVVLDELVKPRLPVIDYLTRFSGIT-KEM 400
Query: 136 IRNPYKTLKDVQNDLMGFVSKDSIIVGHGLENDLRALKLIHSNIIDTSVLFPHSFGLPYR 195
+ TL+D+Q L+ ++ SI+VGH L +DL ALKL H I+DT L+PH G P R
Sbjct: 401 LDPVTTTLRDIQQKLLNIITPRSILVGHSLNSDLNALKLTHPFIVDTVFLYPHPRGPPLR 460
Query: 196 RSLKSIVSQLLHQSIQSGT--HDSFEDARACIDLILWK 231
SLK + + L + IQ GT HDS EDARA ++L+ K
Sbjct: 461 ASLKWLTQKYLGKEIQKGTTGHDSIEDARAVLELVKQK 498
>CGD|CAL0006149 [details] [associations]
symbol:orf19.6195 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0000175 "3'-5'-exoribonuclease
activity" evidence=IEA] [GO:0034415 "tRNA 3'-trailer cleavage,
exonucleolytic" evidence=IEA] [GO:0034476 "U5 snRNA 3'-end
processing" evidence=IEA] [GO:0000467 "exonucleolytic trimming to
generate mature 3'-end of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0002107 "generation of mature 3'-end of 5S rRNA generated by
RNA polymerase III" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 CGD:CAL0006149 Pfam:PF00929
GO:GO:0003676 GO:GO:0005622 GO:GO:0004527 eggNOG:COG0847
InterPro:IPR013520 SUPFAM:SSF53098 EMBL:AACQ01000038
EMBL:AACQ01000037 KO:K14570 RefSeq:XP_718702.1 RefSeq:XP_718786.1
ProteinModelPortal:Q5AAW5 GeneID:3639488 GeneID:3639626
KEGG:cal:CaO19.13575 KEGG:cal:CaO19.6195 Uniprot:Q5AAW5
Length = 744
Score = 316 (116.3 bits), Expect = 2.3e-27, P = 2.3e-27
Identities = 62/159 (38%), Positives = 105/159 (66%)
Query: 80 VYALDTEMVYTVHGLEVARVTVVNVDGRLIYNTLVKPDCEIIDYNTKYSGISAKDFIRNP 139
+YALD E + R+++++ + +++ + LVKP EI DY TKYSGI+ ++ +R+
Sbjct: 338 IYALDCEFCKAGAKQVLTRISLLDFEAKVVMDELVKPKEEITDYVTKYSGIT-EELLRDV 396
Query: 140 YKTLKDVQNDLMGFVSKDSIIVGHGLENDLRALKLIHSNIIDTSVLFPHSFGLPYRRSLK 199
T++D+QN + VS+ I++GH LE+DL +K+ H NI+DTS+++ H+ G P + SLK
Sbjct: 397 TTTIEDIQNLFVNTVSQQDILIGHSLESDLNVMKIKHDNIVDTSIIYEHNRGPPSKPSLK 456
Query: 200 SIVSQLLHQSIQSGT-----HDSFEDARACIDLILWKLL 233
S+ + L++ IQ+G H S EDA+AC+DL+ K++
Sbjct: 457 SLAEKHLNRQIQAGEGQGLGHSSIEDAKACLDLVKLKII 495
>WB|WBGene00004095 [details] [associations]
symbol:pqe-1 species:6239 "Caenorhabditis elegans"
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479 Pfam:PF00929
GO:GO:0005634 GO:GO:0003676 GO:GO:0004527 GO:GO:0090305
eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098 KO:K14570
EMBL:FO081435 PIR:T16421 RefSeq:NP_498135.2 RefSeq:NP_498136.2
RefSeq:NP_498137.2 RefSeq:NP_741133.1 RefSeq:NP_741134.1
RefSeq:NP_741135.1 UniGene:Cel.17767 ProteinModelPortal:Q10124
SMR:Q10124 DIP:DIP-26275N MINT:MINT-1038159 STRING:Q10124
PaxDb:Q10124 PRIDE:Q10124 EnsemblMetazoa:F52C9.8b GeneID:175731
KEGG:cel:CELE_F52C9.8 UCSC:F52C9.8d.2 CTD:175731 WormBase:F52C9.8a
WormBase:F52C9.8b WormBase:F52C9.8c WormBase:F52C9.8d
WormBase:F52C9.8e WormBase:F52C9.8f GeneTree:ENSGT00630000089807
InParanoid:Q10124 OMA:DICRYHN NextBio:889402 ArrayExpress:Q10124
Uniprot:Q10124
Length = 1647
Score = 310 (114.2 bits), Expect = 4.1e-27, Sum P(2) = 4.1e-27
Identities = 66/168 (39%), Positives = 106/168 (63%)
Query: 73 PPPNGYG---VYALDTEMVYTVHGLEVARVTVVNVDGRLIYNTLVKPDCEIIDYNTKYSG 129
P PN VYALD EMVYT+ G +AR+T+V++ + + VKP +++D NT++SG
Sbjct: 1468 PVPNDQRSTRVYALDCEMVYTIAGPALARLTMVDMQRNRVLDVFVKPPTDVLDPNTEFSG 1527
Query: 130 ISAKDFIRNPYKTLKDVQNDLMGFVSKDSIIVGHGLENDLRALKLIHSNIIDTSVLFPHS 189
++ + P TLK L +V+ D+I++GH LE+DL+A++++H N+IDT++LF +
Sbjct: 1528 LTMEQINSAP-DTLKTCHQKLFKYVNADTILIGHSLESDLKAMRVVHKNVIDTAILFRST 1586
Query: 190 FGLPYRRSLKSIVSQLLHQSIQSGT-----HDSFEDARACIDLILWKL 232
+ +LK + ++LLH++IQ HDS EDA C+DLI + L
Sbjct: 1587 RDT--KVALKVLSAKLLHKNIQGDNEDAIGHDSMEDALTCVDLIFYGL 1632
Score = 39 (18.8 bits), Expect = 4.1e-27, Sum P(2) = 4.1e-27
Identities = 8/10 (80%), Positives = 9/10 (90%)
Query: 4 RRRSDEKRLK 13
+RRSDEKR K
Sbjct: 820 KRRSDEKREK 829
Score = 36 (17.7 bits), Expect = 8.4e-27, Sum P(2) = 8.4e-27
Identities = 7/12 (58%), Positives = 9/12 (75%)
Query: 2 KRRRRSDEKRLK 13
KR + S+EKR K
Sbjct: 1146 KRNKESEEKRRK 1157
>CGD|CAL0006310 [details] [associations]
symbol:orf19.4948 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0000175 "3'-5'-exoribonuclease activity" evidence=IEA]
[GO:0034476 "U5 snRNA 3'-end processing" evidence=IEA] [GO:0000467
"exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA
from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479
CGD:CAL0006310 Pfam:PF00929 GO:GO:0005634 GO:GO:0005737
GO:GO:0003676 GO:GO:0004527 GO:GO:0090305 eggNOG:COG0847
InterPro:IPR013520 SUPFAM:SSF53098 EMBL:AACQ01000010
EMBL:AACQ01000009 GO:GO:0006364 RefSeq:XP_722159.1
RefSeq:XP_722272.1 ProteinModelPortal:Q5AL29 STRING:Q5AL29
GeneID:3636061 GeneID:3636164 KEGG:cal:CaO19.12413
KEGG:cal:CaO19.4948 Uniprot:Q5AL29
Length = 404
Score = 293 (108.2 bits), Expect = 6.6e-26, P = 6.6e-26
Identities = 60/152 (39%), Positives = 96/152 (63%)
Query: 80 VYALDTEMVYTVHGLEVARVTVVNV-DGRLIYNTLVKPDCEIIDYNTKYSGISAKDFIRN 138
V +D EM +T G E+ R+T ++ + + + +KP EI+D+NT+YSGI + +
Sbjct: 241 VLGIDCEMGFTTKGFELMRITAIDYFTSKTVLDIFIKPIGEIVDFNTRYSGIHE---LTD 297
Query: 139 PYKTLKDVQNDLMGFVSKDSIIVGHGLENDLRALKLIHSNIIDTSVLFPHSFGL-PYRR- 196
+ + + L + ++I++GHGLEND+ A++LIH NIIDTS+LFP+ + P RR
Sbjct: 298 DFLSWEQSMEKLGEIMDSETILIGHGLENDMNAMRLIHENIIDTSILFPNKWKTGPTRRW 357
Query: 197 SLKSIVSQLLHQSIQSGTHDSFEDARACIDLI 228
SLK + + L + IQ+G HDS ED+ A ID++
Sbjct: 358 SLKDLAFEFLSRRIQTGEHDSCEDSIAAIDIV 389
>UNIPROTKB|G4MYV4 [details] [associations]
symbol:MGG_15523 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479
Pfam:PF00929 GO:GO:0003676 GO:GO:0005622 GO:GO:0004527
InterPro:IPR013520 SUPFAM:SSF53098 EMBL:CM001232
RefSeq:XP_003713422.1 ProteinModelPortal:G4MYV4
EnsemblFungi:MGG_15523T0 GeneID:12987077 KEGG:mgr:MGG_15523
Uniprot:G4MYV4
Length = 720
Score = 285 (105.4 bits), Expect = 2.1e-25, Sum P(2) = 2.1e-25
Identities = 61/160 (38%), Positives = 101/160 (63%)
Query: 77 GYGVYALDTEMVYTV---HGLEVARVTVVNVDGRLIYNTLVKPDCEIIDYNTKYSGISAK 133
G ++A+D EM T H L + RVT+++ DG ++ + LVKP I+DY T++SGI+ K
Sbjct: 310 GREIFAIDCEMCRTGPTNHDLSLTRVTILSWDGEVVMDELVKPSLPILDYLTQFSGIT-K 368
Query: 134 DFIRNPYKTLKDVQNDLMGFVSKDSIIVGHGLENDLRALKLIHSNIIDTSVLFPHSFGLP 193
+ + TL D+Q L+ ++ SI+VGH L++D++AL++ H ++DTS+LFP+
Sbjct: 369 EMLEPVTTTLPDIQKRLLELLTPRSILVGHSLDSDMKALQMAHPFVVDTSILFPNPSSPN 428
Query: 194 YRRSLKSIVSQLLHQSIQS--GT---HDSFEDARACIDLI 228
+ SLK + S+ L + +Q G+ HDS+EDA +DL+
Sbjct: 429 GKHSLKHLASKYLGRQVQKDEGSLKGHDSYEDALTALDLV 468
Score = 37 (18.1 bits), Expect = 2.1e-25, Sum P(2) = 2.1e-25
Identities = 8/16 (50%), Positives = 8/16 (50%)
Query: 60 PLEGYVKTKPRKSPPP 75
PL KPRK P P
Sbjct: 218 PLPKSKDDKPRKGPKP 233
>DICTYBASE|DDB_G0291590 [details] [associations]
symbol:rexo1 "RNA exonuclease 1" species:44689
"Dictyostelium discoideum" [GO:0005622 "intracellular"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0016070 "RNA
metabolic process" evidence=IC] [GO:0008408 "3'-5' exonuclease
activity" evidence=ISS] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 dictyBase:DDB_G0291590 Pfam:PF00929 EMBL:AAFI02000177
GenomeReviews:CM000155_GR GO:GO:0003676 GO:GO:0005622
eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098 GO:GO:0016070
GO:GO:0008408 KO:K14570 RefSeq:XP_635319.1
ProteinModelPortal:Q54EC1 EnsemblProtists:DDB0305007 GeneID:8628263
KEGG:ddi:DDB_G0291590 InParanoid:Q54EC1 OMA:EMLAIDC Uniprot:Q54EC1
Length = 694
Score = 297 (109.6 bits), Expect = 2.2e-25, P = 2.2e-25
Identities = 70/157 (44%), Positives = 99/157 (63%)
Query: 82 ALDTEMVYTVHG-LEVARVTVVNVDGRLIYNTLVKPDCEIIDYNTKYSGISAKDFIRNPY 140
A+D EM T G LE+ R+++VN +++ N LV P+ IIDY T+YSGI+A D ++N
Sbjct: 330 AIDCEMCRTEGGQLELTRISIVNEQKKVVLNELVLPEKPIIDYLTQYSGITA-DTLKNVT 388
Query: 141 KTLKDVQNDLMGFVSKDSIIVGHGLENDLRALKLIHSNIIDTSVLFPHSFGLPYRRSLKS 200
L D+ L V D++++GH LENDL+A+K IH IIDTS+L+P G + SLK
Sbjct: 389 NRLSDIHAKLEKLVGVDTVLIGHSLENDLKAMKFIHRKIIDTSILYPT--GSSGKFSLKY 446
Query: 201 IVSQLLHQSIQS---GT--HDSFEDARACIDLILWKL 232
+ + L++ IQS G HDS EDARA +DL K+
Sbjct: 447 LTKKYLNRIIQSTKHGKLGHDSIEDARAAMDLAQLKI 483
>UNIPROTKB|E2RFH9 [details] [associations]
symbol:LOC479820 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR006055
InterPro:IPR012337 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 SMART:SM00479 Pfam:PF00929 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0005622 GO:GO:0004527
InterPro:IPR013520 SUPFAM:SSF53098 GeneTree:ENSGT00630000089807
OMA:KMIHPYV EMBL:AAEX03004472 Ensembl:ENSCAFT00000028467
Uniprot:E2RFH9
Length = 774
Score = 296 (109.3 bits), Expect = 3.5e-25, P = 3.5e-25
Identities = 83/237 (35%), Positives = 128/237 (54%)
Query: 2 KRRRRSDEKRLKAKSLTSMSVWERKSLFRK-LPPRTGFNPVCTSGLRISALDHVGGINGP 60
K++ D+ ++ SL S S R +L + + G VC + ++ + + + P
Sbjct: 146 KKQATRDQSKMGEGSLPSTSSKVRVNLQNDPIIQKYGSKKVCLTRCLLTK-EEMKTFHFP 204
Query: 61 LEG------YVKTKPRKSPPPNGYGVYALDTEMVYTVHGLEVARVTVVNVDGRLIYNTLV 114
L+G +V TK S N ++ LD EM T G E+ R+++V G + + LV
Sbjct: 205 LQGCPDCANFVPTKCNGSITDNS-PLFGLDCEMCVTSKGRELTRISLVAEGGSCVMDELV 263
Query: 115 KPDCEIIDYNTKYSGISAKDFIRNPYKT-LKDVQNDLMGFVSKDSIIVGHGLENDLRALK 173
KPD +I+DY T +SGI+ K I NP T LKDVQ L + D+++VGH L+ DLRALK
Sbjct: 264 KPDNKILDYLTSFSGITKK--ILNPVTTRLKDVQRQLKSLLPPDAVLVGHSLDLDLRALK 321
Query: 174 LIHSNIIDTSVLFPHSFGLPYRRSLKSIVSQLLHQSIQSGT---HDSFEDARACIDL 227
+IH +IDTS+L+ G ++ LK + +L + IQ HD+ EDAR ++L
Sbjct: 322 MIHPYVIDTSLLYVREQGRRFK--LKFLAKAILGKDIQCPNRLGHDATEDARTTLEL 376
>WB|WBGene00013244 [details] [associations]
symbol:Y56A3A.33 species:6239 "Caenorhabditis elegans"
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IMP] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0003676 GO:GO:0006974
GO:GO:0005622 GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
EMBL:AL132860 KO:K14570 GeneTree:ENSGT00630000089807
RefSeq:NP_499565.1 ProteinModelPortal:Q9U220 SMR:Q9U220
EnsemblMetazoa:Y56A3A.33.1 EnsemblMetazoa:Y56A3A.33.2 GeneID:176636
KEGG:cel:CELE_Y56A3A.33 UCSC:Y56A3A.33 CTD:176636
WormBase:Y56A3A.33 HOGENOM:HOG000019974 InParanoid:Q9U220
OMA:HTLNGLE NextBio:893398 ArrayExpress:Q9U220 Uniprot:Q9U220
Length = 365
Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
Identities = 61/166 (36%), Positives = 107/166 (64%)
Query: 80 VYALDTEMVYTVHGLEVARVTVVNVDGRLIYNTLVKPDCEIIDYNTKYSGISAKDFIRNP 139
V+ALD E+V+T++GLEVARV++V++ G+++ +T P E+I +N+ +SG++ KD
Sbjct: 181 VFALDCELVHTLNGLEVARVSLVDMKGKVLLDTFALPVFEVISFNSTFSGVTEKDM--ES 238
Query: 140 YKTLKDVQNDLMGFVSKDSIIVGHGLENDLRALKLIHSNIIDTSVLFP---HSFGLPYRR 196
+L+ + L ++ ++++VGH LE+DL+AL+L+H N+IDT+VLF S +
Sbjct: 239 AISLEACRLQLFQLINSETLLVGHSLESDLKALRLVHHNVIDTAVLFSIVDPSRSYILKL 298
Query: 197 SLKSIVSQLLHQSIQSGT--HDSFEDARACIDLILWKLLSDFRYNH 240
SL+++ + L + +QS H S ED+ C++L+ + L F Y H
Sbjct: 299 SLQNLAKKYLCKDVQSEASGHSSIEDSHTCMELLATRHL--FFYCH 342
>UNIPROTKB|G4N4M9 [details] [associations]
symbol:MGG_06005 "RNA exonuclease 3" species:242507
"Magnaporthe oryzae 70-15" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479
Pfam:PF00929 EMBL:CM001233 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
RefSeq:XP_003711851.1 ProteinModelPortal:G4N4M9
EnsemblFungi:MGG_06005T0 GeneID:2683970 KEGG:mgr:MGG_06005
Uniprot:G4N4M9
Length = 701
Score = 200 (75.5 bits), Expect = 4.8e-24, Sum P(2) = 4.8e-24
Identities = 41/95 (43%), Positives = 62/95 (65%)
Query: 145 DVQNDLM-GFVSKDSIIVGHGLENDLRALKLIHSNIIDTSVLFPHSFGLPYRRSLKSIVS 203
+V DL+ +S+D+ ++GHGLENDL ++++H I+DT +L+PH+ GLP R L+ ++
Sbjct: 573 EVARDLLFSLISRDTPLMGHGLENDLNCMRVVHPVIVDTVLLYPHNRGLPIRNGLRMLMQ 632
Query: 204 QLLHQSIQ----SGT---HDSFEDARACIDLILWK 231
+L+ IQ G HDS EDARA DL+ WK
Sbjct: 633 TILNTRIQVEPAEGQLAGHDSAEDARAAGDLVRWK 667
Score = 111 (44.1 bits), Expect = 4.8e-24, Sum P(2) = 4.8e-24
Identities = 29/87 (33%), Positives = 43/87 (49%)
Query: 61 LEGYVKTKPRKSPPPNGYGVYALDTEMVYTVHGLEVARVTVVN-VDGRLIYNTLVKPDCE 119
L + +T P P GV D EM YTV G E+ R T + G + + LV+P E
Sbjct: 468 LWNFAET-PENPNAPKDRGV-CFDCEMGYTVKGFEMIRFTATSWPSGEELMDVLVRPFGE 525
Query: 120 IIDYNTKYSGISAKDFIR-NPYKTLKD 145
++D N++YSG+ +D P+ D
Sbjct: 526 VLDLNSQYSGVWPEDLANARPFALASD 552
>UNIPROTKB|E2RFH4 [details] [associations]
symbol:LOC479820 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR006055
InterPro:IPR012337 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 SMART:SM00479 Pfam:PF00929 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0005622 GO:GO:0004527
InterPro:IPR013520 SUPFAM:SSF53098 GeneTree:ENSGT00630000089807
EMBL:AAEX03004472 Ensembl:ENSCAFT00000028470 Uniprot:E2RFH4
Length = 733
Score = 284 (105.0 bits), Expect = 6.2e-24, P = 6.2e-24
Identities = 75/201 (37%), Positives = 112/201 (55%)
Query: 37 GFNPVCTSGLRISALDHVGGINGPLEG------YVKTKPRKSPPPNGYGVYALDTEMVYT 90
G VC + ++ + + + PL+G +V TK S N ++ LD EM T
Sbjct: 137 GSKKVCLTRCLLTK-EEMKTFHFPLQGCPDCANFVPTKCNGSITDNS-PLFGLDCEMCVT 194
Query: 91 VHGLEVARVTVVNVDGRLIYNTLVKPDCEIIDYNTKYSGISAKDFIRNPYKT-LKDVQND 149
G E+ R+++V G + + LVKPD +I+DY T +SGI+ K I NP T LKDVQ
Sbjct: 195 SKGRELTRISLVAEGGSCVMDELVKPDNKILDYLTSFSGITKK--ILNPVTTRLKDVQRQ 252
Query: 150 LMGFVSKDSIIVGHGLENDLRALKLIHSNIIDTSVLFPHSFGLPYRRSLKSIVSQLLHQS 209
L + D+++VGH L+ DLRALK+IH +IDTS+L+ G ++ LK + +L +
Sbjct: 253 LKSLLPPDAVLVGHSLDLDLRALKMIHPYVIDTSLLYVREQGRRFK--LKFLAKAILGKD 310
Query: 210 IQSGT---HDSFEDARACIDL 227
IQ HD+ EDAR ++L
Sbjct: 311 IQCPNRLGHDATEDARTTLEL 331
>UNIPROTKB|Q2T9U5 [details] [associations]
symbol:Q2T9U5 "Putative RNA exonuclease NEF-sp"
species:9913 "Bos taurus" [GO:0005730 "nucleolus" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR006055
InterPro:IPR012337 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 SMART:SM00479 Pfam:PF00929 GO:GO:0005730
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0004527
GO:GO:0090305 eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098
KO:K14570 GeneTree:ENSGT00630000089807 EMBL:BC111262
IPI:IPI00691015 RefSeq:NP_001033243.1 UniGene:Bt.53153
ProteinModelPortal:Q2T9U5 PRIDE:Q2T9U5 Ensembl:ENSBTAT00000008458
GeneID:532864 KEGG:bta:532864 HOGENOM:HOG000015091
HOVERGEN:HBG101031 InParanoid:Q2T9U5 OMA:KMIHPYV NextBio:20875829
ArrayExpress:Q2T9U5 Uniprot:Q2T9U5
Length = 783
Score = 282 (104.3 bits), Expect = 1.2e-23, P = 1.2e-23
Identities = 70/170 (41%), Positives = 100/170 (58%)
Query: 62 EGYVKTKPRKSPPPNGYGVYALDTEMVYTVHGLEVARVTVVNVDGRLIYNTLVKPDCEII 121
E +V TK S N ++ LD EM T G E+ R+++V G + + LVKPD +I+
Sbjct: 213 ENFVPTKCNGSVTDNS-PLFGLDCEMCLTSKGRELTRISLVAEGGGCVMDELVKPDNKIV 271
Query: 122 DYNTKYSGISAKDFIRNPYKT-LKDVQNDLMGFVSKDSIIVGHGLENDLRALKLIHSNII 180
DY T +SGI+ K I NP T LKDVQ L + D+++VGH L+ DLRALK+IH +I
Sbjct: 272 DYLTSFSGITKK--ILNPVTTKLKDVQRRLKILLPPDAVLVGHSLDLDLRALKMIHPYVI 329
Query: 181 DTSVLFPHSFGLPYRRSLKSIVSQLLHQSIQSGT---HDSFEDARACIDL 227
DTS+L+ G ++ LK + +L + IQ HD+ EDAR ++L
Sbjct: 330 DTSLLYVREQGRRFK--LKFLAKAILGKDIQCPDRLGHDATEDARTTLEL 377
>UNIPROTKB|E1BR93 [details] [associations]
symbol:LOC427001 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR000504 InterPro:IPR006055
InterPro:IPR012337 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 SMART:SM00479 Pfam:PF00929 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0005622 GO:GO:0004527
InterPro:IPR013520 SUPFAM:SSF53098 GeneTree:ENSGT00630000089807
EMBL:AADN02064630 EMBL:AADN02064631 EMBL:AADN02064632
EMBL:AADN02064633 EMBL:AADN02064634 IPI:IPI00915205
ProteinModelPortal:E1BR93 Ensembl:ENSGALT00000039112
ArrayExpress:E1BR93 Uniprot:E1BR93
Length = 755
Score = 280 (103.6 bits), Expect = 1.8e-23, P = 1.8e-23
Identities = 62/152 (40%), Positives = 96/152 (63%)
Query: 80 VYALDTEMVYTVHGLEVARVTVVNVDGRLIYNTLVKPDCEIIDYNTKYSGISAKDFIRNP 139
++ LD EM T G EV RV++V+ +G+ + N LVKP+ I++Y T+YSG++ K + P
Sbjct: 222 LFGLDCEMCLTARGNEVVRVSLVDAEGQCLLNELVKPESVIVNYCTRYSGVTRKMLL--P 279
Query: 140 YKT-LKDVQNDLMGFVSKDSIIVGHGLENDLRALKLIHSNIIDTSVLFPHSFGLPYRRSL 198
KT L D+Q L + D+++VGH L DL+AL++IH ++IDTS+LF + G ++ L
Sbjct: 280 VKTRLPDIQTRLKKILPHDAVLVGHSLNADLQALQMIHPSVIDTSLLFARNEGRRFK--L 337
Query: 199 KSIVSQLLHQSIQSGT---HDSFEDARACIDL 227
K + +L + IQ HD EDARA ++L
Sbjct: 338 KFLAKAVLGKEIQCEQRLGHDPAEDARAALEL 369
>UNIPROTKB|F1P5D1 [details] [associations]
symbol:LOC427001 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR000504 InterPro:IPR006055
InterPro:IPR012337 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 SMART:SM00479 Pfam:PF00929 GO:GO:0005730
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0004527
InterPro:IPR013520 SUPFAM:SSF53098 GeneTree:ENSGT00630000089807
EMBL:AADN02064630 EMBL:AADN02064631 EMBL:AADN02064632
EMBL:AADN02064633 EMBL:AADN02064634 IPI:IPI00601052
Ensembl:ENSGALT00000003504 ArrayExpress:F1P5D1 Uniprot:F1P5D1
Length = 773
Score = 280 (103.6 bits), Expect = 1.9e-23, P = 1.9e-23
Identities = 62/152 (40%), Positives = 96/152 (63%)
Query: 80 VYALDTEMVYTVHGLEVARVTVVNVDGRLIYNTLVKPDCEIIDYNTKYSGISAKDFIRNP 139
++ LD EM T G EV RV++V+ +G+ + N LVKP+ I++Y T+YSG++ K + P
Sbjct: 222 LFGLDCEMCLTARGNEVVRVSLVDAEGQCLLNELVKPESVIVNYCTRYSGVTRKMLL--P 279
Query: 140 YKT-LKDVQNDLMGFVSKDSIIVGHGLENDLRALKLIHSNIIDTSVLFPHSFGLPYRRSL 198
KT L D+Q L + D+++VGH L DL+AL++IH ++IDTS+LF + G ++ L
Sbjct: 280 VKTRLPDIQTRLKKILPHDAVLVGHSLNADLQALQMIHPSVIDTSLLFARNEGRRFK--L 337
Query: 199 KSIVSQLLHQSIQSGT---HDSFEDARACIDL 227
K + +L + IQ HD EDARA ++L
Sbjct: 338 KFLAKAVLGKEIQCEQRLGHDPAEDARAALEL 369
>SGD|S000004097 [details] [associations]
symbol:REX3 "RNA exonuclease" species:4932 "Saccharomyces
cerevisiae" [GO:0004527 "exonuclease activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0000175
"3'-5'-exoribonuclease activity" evidence=IMP] [GO:0043628 "ncRNA
3'-end processing" evidence=IMP] [GO:0004518 "nuclease activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0008408 "3'-5' exonuclease activity"
evidence=ISS] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000467
"exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA
from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IGI] [GO:0034476 "U5 snRNA 3'-end processing"
evidence=IGI] InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479
SGD:S000004097 Pfam:PF00929 GO:GO:0005634 GO:GO:0005737
GO:GO:0003676 EMBL:BK006945 eggNOG:COG0847 InterPro:IPR013520
SUPFAM:SSF53098 EMBL:X89514 EMBL:U53878 EMBL:U53876 GO:GO:0000175
GO:GO:0000467 GO:GO:0034476 OrthoDB:EOG48KVM8 EMBL:Z73279
EMBL:Z73280 PIR:S64944 RefSeq:NP_013208.1 ProteinModelPortal:Q12090
SMR:Q12090 STRING:Q12090 EnsemblFungi:YLR107W GeneID:850797
KEGG:sce:YLR107W CYGD:YLR107w HOGENOM:HOG000154095 OMA:DCEMAFT
NextBio:967014 Genevestigator:Q12090 GermOnline:YLR107W
Uniprot:Q12090
Length = 404
Score = 269 (99.8 bits), Expect = 2.7e-23, P = 2.7e-23
Identities = 56/155 (36%), Positives = 100/155 (64%)
Query: 80 VYALDTEMVYTVHGLEVARVTVVNV-DGRLIYNTLVKPDCEIIDYNTKYSGISAKDFIRN 138
V +LD EM +T G E+ R+T+V+ G+ +++ +++P +I+D N+ +SG+ D
Sbjct: 243 VLSLDCEMAFTSLGYEMIRLTIVDFFTGKTLFDHVIQPIGDIVDLNSDFSGVHEIDRTNC 302
Query: 139 P-YKTLKDVQNDLMGFVSKDSIIVGHGLENDLRALKLIHSNIIDTSVLFPHSFGLPYRRS 197
P YK DV ++K+SI++GHGLENDL ++L H+ +IDT++L+ + ++ S
Sbjct: 303 PTYKEALDVFLS-ENLINKNSILIGHGLENDLNVMRLFHNKVIDTAILYSRT---KFKVS 358
Query: 198 LKSIVSQLLHQSIQSGTHDSFEDARACIDLILWKL 232
LK++ ++L + IQ+G HDS +DA A +D++ K+
Sbjct: 359 LKNLAFEVLSRKIQNGEHDSSQDAIATMDVVKVKI 393
>UNIPROTKB|Q96IC2 [details] [associations]
symbol:44M2.3 "Putative RNA exonuclease NEF-sp"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR000504 InterPro:IPR006055
InterPro:IPR012337 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 SMART:SM00479 Pfam:PF00929 GO:GO:0005730
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723 EMBL:AC004381
GO:GO:0004527 GO:GO:0090305 eggNOG:COG0847 InterPro:IPR013520
SUPFAM:SSF53098 EMBL:CH471228 HOVERGEN:HBG101031 OMA:KMIHPYV
EMBL:AF332193 EMBL:AL136763 EMBL:AK057254 EMBL:AK314458
EMBL:BC007646 EMBL:BC068503 EMBL:AL162035 IPI:IPI00021754
IPI:IPI00307029 PIR:T47187 RefSeq:NP_001138396.1
RefSeq:NP_001185982.1 RefSeq:NP_112203.2 UniGene:Hs.177926
ProteinModelPortal:Q96IC2 SMR:Q96IC2 IntAct:Q96IC2
PhosphoSite:Q96IC2 DMDM:74760869 PaxDb:Q96IC2 PRIDE:Q96IC2
DNASU:81691 GeneID:81691 KEGG:hsa:81691 UCSC:uc002dhv.3
UCSC:uc002dhx.3 GeneCards:GC16P020817 HPA:HPA040755 HPA:HPA040868
neXtProt:NX_Q96IC2 InParanoid:Q96IC2 OrthoDB:EOG44F69Z
PhylomeDB:Q96IC2 GenomeRNAi:81691 NextBio:72040 Bgee:Q96IC2
Genevestigator:Q96IC2 Uniprot:Q96IC2
Length = 774
Score = 276 (102.2 bits), Expect = 5.0e-23, P = 5.0e-23
Identities = 68/170 (40%), Positives = 100/170 (58%)
Query: 62 EGYVKTKPRKSPPPNGYGVYALDTEMVYTVHGLEVARVTVVNVDGRLIYNTLVKPDCEII 121
E ++ TK S N ++ LD EM T G E+ R+++V G + + LVKP+ +I+
Sbjct: 211 ENFLLTKCNGSIADNS-PLFGLDCEMCLTSKGRELTRISLVAEGGCCVMDELVKPENKIL 269
Query: 122 DYNTKYSGISAKDFIRNPYKT-LKDVQNDLMGFVSKDSIIVGHGLENDLRALKLIHSNII 180
DY T +SGI+ K I NP T LKDVQ L + D+++VGH L+ DLRALK+IH +I
Sbjct: 270 DYLTSFSGITKK--ILNPVTTKLKDVQRQLKALLPPDAVLVGHSLDLDLRALKMIHPYVI 327
Query: 181 DTSVLFPHSFGLPYRRSLKSIVSQLLHQSIQSGT---HDSFEDARACIDL 227
DTS+L+ G ++ LK + +L + IQ HD+ EDAR ++L
Sbjct: 328 DTSLLYVREQGRRFK--LKFLAKVILGKDIQCPDRLGHDATEDARTILEL 375
>FB|FBgn0035707 [details] [associations]
symbol:CG8368 species:7227 "Drosophila melanogaster"
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479
Pfam:PF00929 EMBL:AE014296 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098
KO:K14570 GeneTree:ENSGT00630000089807 EMBL:BT023775
RefSeq:NP_648050.1 RefSeq:NP_729177.1 UniGene:Dm.30144 SMR:Q9VRX7
IntAct:Q9VRX7 MINT:MINT-298361 EnsemblMetazoa:FBtr0076976
EnsemblMetazoa:FBtr0076977 GeneID:38740 KEGG:dme:Dmel_CG8368
UCSC:CG8368-RA FlyBase:FBgn0035707 InParanoid:Q9VRX7 OMA:DKFPRTK
OrthoDB:EOG49P8DJ GenomeRNAi:38740 NextBio:810128 Uniprot:Q9VRX7
Length = 681
Score = 272 (100.8 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 66/188 (35%), Positives = 106/188 (56%)
Query: 55 GGINGPLEGYVKTKPRKSPPPNGYGVYALDTEMVYTVHGL-EVARVTVVNVDGRLIYNTL 113
G ++ + + TK +P N ++ +D EM +T G E+ R+++VN + +Y TL
Sbjct: 331 GELHTRFQNFKFTKDLYAPVTNRSPMFGVDCEMCHTEAGCNELTRISIVNENYETVYETL 390
Query: 114 VKPDCEIIDYNTKYSGISAKDFIRNPYKTLKDVQNDLMGFVSKDSIIVGHGLENDLRALK 173
V P+ I DY T+YSGI+A + + K L VQ ++ + D+I+VG L +DL A+K
Sbjct: 391 VLPNNRITDYLTQYSGITA-EIMEQVTKRLDVVQKEVSELLPPDAILVGQSLNSDLNAMK 449
Query: 174 LIHSNIIDTSVLFPHSFGLPYRRS-LKSIVSQLLHQSIQSGT--HDSFEDARACIDLILW 230
++H +IDTSV F S G+ R++ LK + L + IQ HDS ED+RA + L+
Sbjct: 450 MMHPYVIDTSVCFNTS-GVRRRKTKLKDLAKTFLQEIIQENIDGHDSIEDSRATLKLVKK 508
Query: 231 KLLSDFRY 238
KL + +
Sbjct: 509 KLANSIEF 516
>UNIPROTKB|F1RPB4 [details] [associations]
symbol:F1RPB4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005730 "nucleolus" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR006055
InterPro:IPR012337 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 SMART:SM00479 Pfam:PF00929 GO:GO:0005730
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0004527
InterPro:IPR013520 SUPFAM:SSF53098 GeneTree:ENSGT00630000089807
OMA:KMIHPYV EMBL:FP016068 EMBL:CU464004 Ensembl:ENSSSCT00000008605
Uniprot:F1RPB4
Length = 790
Score = 254 (94.5 bits), Expect = 1.2e-20, P = 1.2e-20
Identities = 68/180 (37%), Positives = 101/180 (56%)
Query: 60 PLEGYVKTKP--RKSPPPNGYGVYA----LDTEMVYTVHGLEVARVTVVNVDGRLIYNTL 113
PL+G+ K++ KS ++ LD T G E+ R+++V G + + L
Sbjct: 205 PLQGFFKSEKIVAKSKVTGENFTHSHLSGLDNNRCLTSKGRELTRISLVAEGGCCVMDEL 264
Query: 114 VKPDCEIIDYNTK--YSGISAKDFIRNPYKT-LKDVQNDLMGFVSKDSIIVGHGLENDLR 170
VKPD +I+DY T +SGI+ K I NP T LKDVQ L + D+++VGH L+ DLR
Sbjct: 265 VKPDNKIVDYLTSESFSGITKK--ILNPVTTKLKDVQRQLKALLPPDAVLVGHSLDLDLR 322
Query: 171 ALKLIHSNIIDTSVLFPHSFGLPYRRSLKSIVSQLLHQSIQSGT---HDSFEDARACIDL 227
ALK+IH +IDTS+L+ G ++ LK + +L + IQ HD+ EDAR ++L
Sbjct: 323 ALKMIHPYVIDTSLLYVREQGRRFK--LKFLAKTILGKDIQCPDRLGHDAIEDARTTLEL 380
>RGD|1305412 [details] [associations]
symbol:Exnef "exonuclease NEF-sp" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004527 "exonuclease activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;ISO] InterPro:IPR000504 InterPro:IPR006055
InterPro:IPR012337 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 SMART:SM00479 Pfam:PF00929 RGD:1305412 GO:GO:0005730
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0004527
GO:GO:0090305 eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098
KO:K14570 HOGENOM:HOG000015091 HOVERGEN:HBG101031 OrthoDB:EOG44F69Z
EMBL:BC128775 IPI:IPI00565694 RefSeq:NP_001073174.1
UniGene:Rn.203990 ProteinModelPortal:A1A5R7 PhosphoSite:A1A5R7
PRIDE:A1A5R7 GeneID:309036 KEGG:rno:309036 UCSC:RGD:1305412
CTD:309036 InParanoid:A1A5R7 NextBio:660038 Genevestigator:A1A5R7
Uniprot:A1A5R7
Length = 754
Score = 251 (93.4 bits), Expect = 2.3e-20, P = 2.3e-20
Identities = 61/157 (38%), Positives = 93/157 (59%)
Query: 80 VYALDTEMVYTVHGLEVARVTVVNVDGRLIYNTLVKPDCEIIDYNTKYSGISAKDFIRNP 139
++ LD E+ T G E+ R+++V G + + LVKPD +I+DY T +SGI+ + I NP
Sbjct: 222 LFGLDCEVCLTSMGKELTRISLVAEGGYCLMDELVKPDFKILDYLTSFSGITKE--ILNP 279
Query: 140 YKT-LKDVQNDLMGFVSKDSIIVGHGLENDLRALKLIHSNIIDTSVLFPHSFGLPYRRSL 198
T LKDVQ L + D+++VGH L+ DLR LK+IH +IDTS+L+ G ++ L
Sbjct: 280 VTTKLKDVQKLLRELLPPDAVLVGHCLDLDLRVLKIIHPYVIDTSLLYIGKQGRRFK--L 337
Query: 199 KSIVSQLLHQSIQSGT---HDSFEDARACIDLILWKL 232
+ +L + IQ HD EDAR ++L+ + L
Sbjct: 338 TFLAKVILGKDIQCPNKLGHDGIEDARTALELVQYFL 374
>UNIPROTKB|F1M6V9 [details] [associations]
symbol:Exnef "Protein Exnef" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR006055 InterPro:IPR012337
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
SMART:SM00479 Pfam:PF00929 RGD:1305412 GO:GO:0005730 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0004527 InterPro:IPR013520
SUPFAM:SSF53098 GeneTree:ENSGT00630000089807 IPI:IPI00565694
Ensembl:ENSRNOT00000019654 Uniprot:F1M6V9
Length = 754
Score = 251 (93.4 bits), Expect = 2.3e-20, P = 2.3e-20
Identities = 61/157 (38%), Positives = 93/157 (59%)
Query: 80 VYALDTEMVYTVHGLEVARVTVVNVDGRLIYNTLVKPDCEIIDYNTKYSGISAKDFIRNP 139
++ LD E+ T G E+ R+++V G + + LVKPD +I+DY T +SGI+ + I NP
Sbjct: 222 LFGLDCEVCLTSMGKELTRISLVAEGGYCLMDELVKPDFKILDYLTSFSGITKE--ILNP 279
Query: 140 YKT-LKDVQNDLMGFVSKDSIIVGHGLENDLRALKLIHSNIIDTSVLFPHSFGLPYRRSL 198
T LKDVQ L + D+++VGH L+ DLR LK+IH +IDTS+L+ G ++ L
Sbjct: 280 VTTKLKDVQKLLRELLPPDAVLVGHCLDLDLRVLKIIHPYVIDTSLLYIGKQGRRFK--L 337
Query: 199 KSIVSQLLHQSIQSGT---HDSFEDARACIDLILWKL 232
+ +L + IQ HD EDAR ++L+ + L
Sbjct: 338 TFLAKVILGKDIQCPNKLGHDGIEDARTALELVQYFL 374
>UNIPROTKB|F1PWV6 [details] [associations]
symbol:AEN "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042771 "intrinsic apoptotic signaling
pathway in response to DNA damage by p53 class mediator"
evidence=IEA] [GO:0010212 "response to ionizing radiation"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=IEA] [GO:0004527 "exonuclease activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479 Pfam:PF00929
GO:GO:0005654 GO:GO:0005730 GO:GO:0042771 GO:GO:0003676
GO:GO:0010212 GO:GO:0004527 OMA:HKRKSRQ InterPro:IPR013520
SUPFAM:SSF53098 GeneTree:ENSGT00520000055542 EMBL:AAEX03002316
EMBL:AAEX03002317 Ensembl:ENSCAFT00000018286 Uniprot:F1PWV6
Length = 336
Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
Identities = 73/244 (29%), Positives = 122/244 (50%)
Query: 3 RRRRSDEKRLKAKSLTSMSVWERKSLFRKLPPRTGFNPV-----CTSGLRI--SALDHVG 55
RR+ + R + + ++ + + L +PP+ G +P+ G S + +
Sbjct: 27 RRKHKRKSRQHQRFMARKALLQEQGLL-SMPPKLGPSPLPMPSEALPGTEATSSGMQRLR 85
Query: 56 GINGPLEGYVKTKPRKSPPPNGYGVYALDTEMVYT-VHGL--EVARVTVVNVDGRLIYNT 112
G K PR+S P A+D EMV T G E+AR +VV+ G ++Y+
Sbjct: 86 NEPGGASWSRKPTPRESAGPRPSKCVAIDCEMVGTGPRGRVSELARCSVVSYHGDVLYDK 145
Query: 113 LVKPDCEIIDYNTKYSGISAKDFIRN-PYKTLKDVQNDLMGFVSKDSIIVGHGLENDLRA 171
++P+ I+DY T++SG++ + + P++ Q +++ + K ++VGH L ND +A
Sbjct: 146 YIRPEMPIVDYRTRWSGVTRQHMRKAIPFQV---AQKEILKLL-KGKVVVGHALHNDFQA 201
Query: 172 LKLIH--SNIIDTSVL--FPHSFGLPYRR--SLKSIVSQLLHQSIQSGTH--DSFEDARA 223
LK +H S DT+ + H GL R SLK + QLLH+ IQ+G H S EDA
Sbjct: 202 LKYVHPRSQTRDTTYVPNLLHQPGLHTRTRVSLKDLALQLLHKKIQAGQHGHSSVEDATT 261
Query: 224 CIDL 227
++L
Sbjct: 262 AMEL 265
>UNIPROTKB|J9PA78 [details] [associations]
symbol:AEN "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 GO:GO:0003676
GO:GO:0005622 GO:GO:0004527 CTD:64782 InterPro:IPR013520
SUPFAM:SSF53098 GeneTree:ENSGT00520000055542 EMBL:AAEX03002316
EMBL:AAEX03002317 RefSeq:XP_545846.2 Ensembl:ENSCAFT00000047692
GeneID:488728 KEGG:cfa:488728 Uniprot:J9PA78
Length = 324
Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
Identities = 73/244 (29%), Positives = 122/244 (50%)
Query: 3 RRRRSDEKRLKAKSLTSMSVWERKSLFRKLPPRTGFNPV-----CTSGLRI--SALDHVG 55
RR+ + R + + ++ + + L +PP+ G +P+ G S + +
Sbjct: 27 RRKHKRKSRQHQRFMARKALLQEQGLL-SMPPKLGPSPLPMPSEALPGTEATSSGMQRLR 85
Query: 56 GINGPLEGYVKTKPRKSPPPNGYGVYALDTEMVYT-VHGL--EVARVTVVNVDGRLIYNT 112
G K PR+S P A+D EMV T G E+AR +VV+ G ++Y+
Sbjct: 86 NEPGGASWSRKPTPRESAGPRPSKCVAIDCEMVGTGPRGRVSELARCSVVSYHGDVLYDK 145
Query: 113 LVKPDCEIIDYNTKYSGISAKDFIRN-PYKTLKDVQNDLMGFVSKDSIIVGHGLENDLRA 171
++P+ I+DY T++SG++ + + P++ Q +++ + K ++VGH L ND +A
Sbjct: 146 YIRPEMPIVDYRTRWSGVTRQHMRKAIPFQV---AQKEILKLL-KGKVVVGHALHNDFQA 201
Query: 172 LKLIH--SNIIDTSVL--FPHSFGLPYRR--SLKSIVSQLLHQSIQSGTH--DSFEDARA 223
LK +H S DT+ + H GL R SLK + QLLH+ IQ+G H S EDA
Sbjct: 202 LKYVHPRSQTRDTTYVPNLLHQPGLHTRTRVSLKDLALQLLHKKIQAGQHGHSSVEDATT 261
Query: 224 CIDL 227
++L
Sbjct: 262 AMEL 265
>ASPGD|ASPL0000071877 [details] [associations]
symbol:AN5013 species:162425 "Emericella nidulans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0000175 "3'-5'-exoribonuclease activity" evidence=IEA]
[GO:0034476 "U5 snRNA 3'-end processing" evidence=IEA] [GO:0000467
"exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA
from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479
Pfam:PF00929 GO:GO:0005634 GO:GO:0005737 GO:GO:0003676
GO:GO:0004527 GO:GO:0090305 eggNOG:COG0847 InterPro:IPR013520
SUPFAM:SSF53098 EMBL:BN001303 EMBL:AACD01000084 GO:GO:0006364
RefSeq:XP_662617.1 ProteinModelPortal:Q5B367 GeneID:2872816
KEGG:ani:AN5013.2 HOGENOM:HOG000198400 OMA:FDCEMGY
OrthoDB:EOG4JMBZF Uniprot:Q5B367
Length = 638
Score = 172 (65.6 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 35/86 (40%), Positives = 55/86 (63%)
Query: 150 LMGFVSKDSIIVGHGLENDLRALKLIHSNIIDTSVLFPH-SFGLPYRRSLKSIVSQLLHQ 208
L ++ + ++GH ++NDL A ++IH +IDT++L+PH GLPYR SL+++ + L +
Sbjct: 500 LFNLLTPSTPLIGHAIDNDLNACRIIHPTVIDTAILYPHPGGGLPYRMSLRTLAKKHLDR 559
Query: 209 SIQSGT------HDSFEDARACIDLI 228
IQ+G HDS EDA A DL+
Sbjct: 560 EIQTGGASGKQGHDSVEDALATGDLV 585
Score = 111 (44.1 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 33/121 (27%), Positives = 62/121 (51%)
Query: 25 RKSLFRKLPPRTGFNPVCTSGL-RISALDHVGGINGPLEGYVKTKPRKSPPPNGYGVYAL 83
R+ F + G + CT+G + + + L+ + KT P ++P +
Sbjct: 354 REGYFTCCNQKLGESSGCTTGATHVYKVSETKRLASILQ-FEKT-P-ENPDLHNPTPICF 410
Query: 84 DTEMVYTVHGLEVARVTVVN-VDGRLIYNTLVKPDCEIIDYNTKYSGISAKDFIRN-PYK 141
D EM YT G+E+ R+T V+ +G+ + + LV+P E++D N+++SG+ + + PY
Sbjct: 411 DCEMGYTTLGMELIRLTAVSWPEGKKVLDVLVRPLGEVLDLNSRFSGVFPEHYTNALPYS 470
Query: 142 T 142
T
Sbjct: 471 T 471
>UNIPROTKB|Q5REE2 [details] [associations]
symbol:AEN "Apoptosis-enhancing nuclease" species:9601
"Pongo abelii" [GO:0004527 "exonuclease activity" evidence=ISS]
[GO:0005654 "nucleoplasm" evidence=ISS] [GO:0005730 "nucleolus"
evidence=ISS] [GO:0010212 "response to ionizing radiation"
evidence=ISS] [GO:0042771 "intrinsic apoptotic signaling pathway in
response to DNA damage by p53 class mediator" evidence=ISS]
InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479 Pfam:PF00929
GO:GO:0005654 GO:GO:0005730 GO:GO:0042771 GO:GO:0003676
GO:GO:0010212 GO:GO:0004527 CTD:64782 HOGENOM:HOG000182422
HOVERGEN:HBG100435 InterPro:IPR013520 SUPFAM:SSF53098 EMBL:CR857587
RefSeq:NP_001124869.1 UniGene:Pab.10699 ProteinModelPortal:Q5REE2
SMR:Q5REE2 GeneID:100171731 KEGG:pon:100171731 Uniprot:Q5REE2
Length = 325
Score = 229 (85.7 bits), Expect = 4.0e-19, P = 4.0e-19
Identities = 76/242 (31%), Positives = 120/242 (49%)
Query: 10 KRLKAKSLTSMSVWERKSLFRK-----LPPRTGFNPVCTSGLRISAL-DHVGGINGPLEG 63
KR K +S RK+L ++ +PP G +P+ T ++A D G P G
Sbjct: 28 KRHKRRSRQHQRFMARKALLQEQGLLSMPPEPGSSPLPTPFGAVTATEDASSGKQCPRAG 87
Query: 64 YV------KTKPRKSPPPNGYGVYALDTEMVYT-VHGL--EVARVTVVNVDGRLIYNTLV 114
+ P K+ P A+D EMV T G E+AR ++V+ G ++Y+ +
Sbjct: 88 SGGAPCSRRPAPGKASGPLPSKCVAIDCEMVGTGPRGRVSELARCSIVSYHGDVLYDKYI 147
Query: 115 KPDCEIIDYNTKYSGISAKDFIRN-PYKTLKDVQNDLMGFVSKDSIIVGHGLENDLRALK 173
+P+ I+DY T++SGI+ + + P++ Q +++ + K ++VGH L ND +ALK
Sbjct: 148 RPEMPIVDYRTRWSGITRQHMCKAIPFQV---AQKEILKLL-KGKVVVGHALHNDFQALK 203
Query: 174 LIH--SNIIDTSV----LFPHSFGLPYRRSLKSIVSQLLHQSIQSGTH--DSFEDARACI 225
+H S DT+ L S + R SLK + QLLH+ IQ G H S EDA +
Sbjct: 204 YVHPRSQTRDTTYVPNFLSEPSLHIRARVSLKDLALQLLHKKIQVGQHGHSSVEDATTAM 263
Query: 226 DL 227
+L
Sbjct: 264 EL 265
>TAIR|locus:2083163 [details] [associations]
symbol:SDN1 "small RNA degrading nuclease 1" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008408 "3'-5' exonuclease activity"
evidence=IDA] [GO:0010587 "miRNA catabolic process" evidence=IDA]
InterPro:IPR006055 InterPro:IPR012337 InterPro:IPR012677
SMART:SM00479 Pfam:PF00929 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098
GO:GO:0008408 EMBL:AL132978 KO:K14570 GO:GO:0010587 EMBL:BT030315
IPI:IPI00540352 PIR:T45863 RefSeq:NP_190579.2 UniGene:At.35533
ProteinModelPortal:A3KPE8 SMR:A3KPE8 PaxDb:A3KPE8 PRIDE:A3KPE8
EnsemblPlants:AT3G50100.1 GeneID:824172 KEGG:ath:AT3G50100
TAIR:At3g50100 HOGENOM:HOG000083886 InParanoid:A3KPE8 OMA:DYRTDIT
PhylomeDB:A3KPE8 ProtClustDB:CLSN2925541 Genevestigator:A3KPE8
Uniprot:A3KPE8
Length = 409
Score = 231 (86.4 bits), Expect = 7.0e-19, P = 7.0e-19
Identities = 57/152 (37%), Positives = 88/152 (57%)
Query: 82 ALDTEMVYTVHGLE-VARVTVVNVDGRLIYNTLVKPDCEIIDYNTKYSGISAKDFIRNPY 140
A+D EMV G E + RV VV+ D ++I + VKP+ ++DY T +GI+A+D I N
Sbjct: 142 AVDCEMVLCEDGTEGLVRVGVVDRDLKVILDEFVKPNKPVVDYRTDITGITAED-IENAS 200
Query: 141 KTLKDVQNDLMGFVSKDSIIVGHGLENDLRALKLIHSNIIDTSVLFPHSFGLPYRR-SLK 199
++ D+Q L F+S +I+VGH L DL LK+ H +IDT+++F + RR SL
Sbjct: 201 LSVVDIQETLQPFLSTGTILVGHSLNRDLEVLKIDHPKVIDTALVFKYPNTRKLRRPSLN 260
Query: 200 SIVSQLLHQSIQ-SGT-HDSFEDARACIDLIL 229
++ +L ++ +G HD DA A + L L
Sbjct: 261 NLCKSILGYEVRKTGVPHDCVHDASAAMKLAL 292
>WB|WBGene00015462 [details] [associations]
symbol:C05C8.5 species:6239 "Caenorhabditis elegans"
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098
KO:K14570 GeneTree:ENSGT00630000089807 EMBL:FO080353 PIR:T31744
RefSeq:NP_504838.1 ProteinModelPortal:O16312 SMR:O16312
PaxDb:O16312 EnsemblMetazoa:C05C8.5.1 EnsemblMetazoa:C05C8.5.2
GeneID:179116 KEGG:cel:CELE_C05C8.5 UCSC:C05C8.5 CTD:179116
WormBase:C05C8.5 HOGENOM:HOG000021553 InParanoid:O16312 OMA:DAWAAMR
NextBio:903992 Uniprot:O16312
Length = 594
Score = 235 (87.8 bits), Expect = 7.6e-19, P = 7.6e-19
Identities = 64/174 (36%), Positives = 94/174 (54%)
Query: 62 EGYVKTKPRKSPPPNGYGVYALDTEMVYT-VHGLEVARVTVVNVDGRLIYNTLVKPDCEI 120
EG V TK ++++D EM T V E+ R+++V+ I +TLVKP+ I
Sbjct: 203 EGVVPTKQGYKKISASSPMFSVDCEMCETDVANRELTRISIVDEFENTILDTLVKPEGRI 262
Query: 121 IDYNTKYSGISAKDFIRNPYKTLKDVQNDLMGFVSKDSIIVGHGLENDLRALKLIHSNII 180
DY T++SGI+ D + TL DVQ + + D+I+VGH LE+DL+A+K+ H +
Sbjct: 263 TDYVTRWSGITP-DMMEGVTTTLGDVQKAIQSLLPPDAILVGHSLEHDLQAMKMTHPFCL 321
Query: 181 DTS-VLFPHSFGLPYRRSLKSIVSQLLHQSIQSGT-HDSFEDARACIDLILWKL 232
D VL + +R SLK++ L IQS H S+EDA A + L KL
Sbjct: 322 DVGHVLNYTNSNTEFRNSLKNLTELFLGAQIQSEFGHCSYEDAWAAMRLAQLKL 375
>MGI|MGI:1915298 [details] [associations]
symbol:Aen "apoptosis enhancing nuclease" species:10090 "Mus
musculus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004518 "nuclease activity" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=ISO] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0010212 "response to
ionizing radiation" evidence=ISO] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0042771 "intrinsic apoptotic signaling pathway in
response to DNA damage by p53 class mediator" evidence=ISO]
InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479 Pfam:PF00929
MGI:MGI:1915298 GO:GO:0005654 GO:GO:0005730 GO:GO:0042771
GO:GO:0003676 GO:GO:0010212 GO:GO:0004527 CTD:64782 eggNOG:COG0847
HOGENOM:HOG000182422 HOVERGEN:HBG100435 OMA:HKRKSRQ
OrthoDB:EOG4P8FJM InterPro:IPR013520 SUPFAM:SSF53098 EMBL:AK090056
EMBL:AK012555 EMBL:AK031972 EMBL:AK165708 EMBL:AK166806
EMBL:AK167042 EMBL:AK167658 EMBL:BC022614 IPI:IPI00857428
IPI:IPI00990849 RefSeq:NP_001156411.1 RefSeq:NP_080807.3
UniGene:Mm.34109 ProteinModelPortal:Q9CZI9 SMR:Q9CZI9
PhosphoSite:Q9CZI9 PRIDE:Q9CZI9 Ensembl:ENSMUST00000107421
Ensembl:ENSMUST00000107423 Ensembl:ENSMUST00000107425 GeneID:68048
KEGG:mmu:68048 UCSC:uc009hxp.1 UCSC:uc009hxq.1
GeneTree:ENSGT00520000055542 InParanoid:Q9CZI9 NextBio:326308
Bgee:Q9CZI9 Genevestigator:Q9CZI9 Uniprot:Q9CZI9
Length = 336
Score = 226 (84.6 bits), Expect = 8.3e-19, P = 8.3e-19
Identities = 61/175 (34%), Positives = 97/175 (55%)
Query: 66 KTKPRKSPPPNGYGVYALDTEMVYT-VHGL--EVARVTVVNVDGRLIYNTLVKPDCEIID 122
K+ PR++P P A+D EMV T G E+AR +VV+ G ++Y+ ++P+ I+D
Sbjct: 95 KSVPREAPRPGPIKCVAIDCEMVGTGPQGRVSELARCSVVSYSGDVLYDKYIRPEMPIVD 154
Query: 123 YNTKYSGISAKDFIRN-PYKTLKDVQNDLMGFVSKDSIIVGHGLENDLRALKLIH--SNI 179
Y T++SGI+ + + P++ Q +++ + K ++VGH L ND +ALK +H S
Sbjct: 155 YRTRWSGITRQHMHKAIPFQV---AQKEILKLL-KGKVVVGHALHNDFQALKYVHPRSQT 210
Query: 180 IDTSVLFPHSFGLPY-----RRSLKSIVSQLLHQSIQSGT--HDSFEDARACIDL 227
DT+ + P+ P R SLK + LLH+ IQ G H S EDA ++L
Sbjct: 211 RDTTYV-PNLLSQPSSLIRTRVSLKDLALNLLHKKIQVGHQGHSSVEDAMTAMEL 264
>TAIR|locus:2169717 [details] [associations]
symbol:SDN2 "small RNA degrading nuclease 2" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479
Pfam:PF00929 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003676 GO:GO:0004527 GO:GO:0090305 eggNOG:COG0847
InterPro:IPR013520 SUPFAM:SSF53098 EMBL:AB005241 KO:K14570
HOGENOM:HOG000083886 EMBL:BT009685 EMBL:AK118437 IPI:IPI00548498
IPI:IPI00892313 RefSeq:NP_001119175.1 RefSeq:NP_196173.1
UniGene:At.43773 ProteinModelPortal:Q9FFG1 SMR:Q9FFG1 IntAct:Q9FFG1
PaxDb:Q9FFG1 PRIDE:Q9FFG1 EnsemblPlants:AT5G05540.1 GeneID:830437
KEGG:ath:AT5G05540 TAIR:At5g05540 InParanoid:Q9FFG1 OMA:QAFENIA
PhylomeDB:Q9FFG1 ProtClustDB:CLSN2686647 Genevestigator:Q9FFG1
Uniprot:Q9FFG1
Length = 466
Score = 232 (86.7 bits), Expect = 8.7e-19, P = 8.7e-19
Identities = 63/189 (33%), Positives = 106/189 (56%)
Query: 51 LDHVGGINGPLEGYVKTK-PRKSPPPNGYGVYALDTEMVYTVHGLE-VARVTVVNVDGRL 108
LD++ N E +V+T +K P + A+D EMV G E V RV V+ D ++
Sbjct: 114 LDYLFPSNA--EDWVRTGLGKKKMEPTKIEMIAIDCEMVLCEDGSEAVVRVAAVDRDLKV 171
Query: 109 IYNTLVKPDCEIIDYNTKYSGISAKDFIRNPYKTLKDVQNDLMGFVSKDSIIVGHGLEND 168
I + VKP+ ++DY T +G++A+D + + D+Q L+ F+S+D+I+VG L +D
Sbjct: 172 ILDEFVKPNQPVVDYRTFITGLTAQDLEKATISVV-DIQEKLLMFISEDTILVGQSLNHD 230
Query: 169 LRALKLIHSNIIDTSVLFPHSFG-----LPYRR-SLKSIVSQLLHQSIQS-GT-HDSFED 220
L+ LK+ H+ +IDTS++F +++ L +R SL + +L +Q G H+ D
Sbjct: 231 LKVLKVDHARVIDTSLVFKYNYDGTRRPLRLKRPSLNYLCKCILGYEVQKEGVPHNCVHD 290
Query: 221 ARACIDLIL 229
A A + L+L
Sbjct: 291 AEAAMKLVL 299
>UNIPROTKB|E1C018 [details] [associations]
symbol:AEN "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0010212 "response to ionizing radiation" evidence=IEA]
[GO:0042771 "intrinsic apoptotic signaling pathway in response to
DNA damage by p53 class mediator" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 GO:GO:0005654
GO:GO:0005730 GO:GO:0042771 GO:GO:0003676 GO:GO:0010212
GO:GO:0004527 OMA:HKRKSRQ InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 EMBL:AADN02041516 IPI:IPI00577225
ProteinModelPortal:E1C018 Ensembl:ENSGALT00000010894
NextBio:20819091 Uniprot:E1C018
Length = 301
Score = 225 (84.3 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 82/252 (32%), Positives = 123/252 (48%)
Query: 2 KRRRRSDEKRLKAKSLTSMS--VWERKSLFRKLPPRTGFNPVCTSGLRISAL-------- 51
K++ R ++ ++ ++L + R L + PP G + V G ++S L
Sbjct: 9 KKKSRRHQRFMERRALLERRGLLRPRHRLGTQGPPG-GLSSVTPRGWKVSKLGLSVSPSA 67
Query: 52 ---DHVGGINGPLEGYVKTKPRKSPP-PNGYGVYALDTEMVYT-VHGL--EVARVTVVNV 104
D VG G G T + PP PN Y A+D EMV T G E+AR ++V+
Sbjct: 68 SPNDIVGRCCGTSVGNAVTGVQLCPPRPNKY--VAIDCEMVGTGPRGRQSELARCSIVSY 125
Query: 105 DGRLIYNTLVKPDCEIIDYNTKYSGISAKDFIRN-PYKTLKDVQNDLMGFVSKDSIIVGH 163
DG +IY+ V P ++D+ T++SGI+ + P++ Q +++ + KD I+VGH
Sbjct: 126 DGDVIYDKYVLPLLPVVDFRTRWSGITKRHMESAIPFRA---AQEEILKIL-KDRIVVGH 181
Query: 164 GLENDLRALKLIH--SNIIDTS--VLFPHSFGLP--YRRSLKSIVSQLLHQSIQSGT--H 215
+ ND +ALK H DTS L GLP SLKS+ LL + IQ G H
Sbjct: 182 AIHNDFQALKYFHPKERTRDTSRIPLLNQRAGLPPGANASLKSLARHLLQKKIQVGCKGH 241
Query: 216 DSFEDARACIDL 227
S EDAR ++L
Sbjct: 242 SSVEDARTAMEL 253
>UNIPROTKB|H3BQ98 [details] [associations]
symbol:LOC81691 "Protein LOC81691" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0003676 GO:GO:0005622
EMBL:AC004381 GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
Ensembl:ENST00000565340 Bgee:H3BQ98 Uniprot:H3BQ98
Length = 143
Score = 224 (83.9 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 53/119 (44%), Positives = 75/119 (63%)
Query: 113 LVKPDCEIIDYNTKYSGISAKDFIRNPYKT-LKDVQNDLMGFVSKDSIIVGHGLENDLRA 171
LVKP+ +I+DY T +SGI+ K I NP T LKDVQ L + D+++VGH L+ DLRA
Sbjct: 4 LVKPENKILDYLTSFSGITKK--ILNPVTTKLKDVQRQLKALLPPDAVLVGHSLDLDLRA 61
Query: 172 LKLIHSNIIDTSVLFPHSFGLPYRRSLKSIVSQLLHQSIQSGT---HDSFEDARACIDL 227
LK+IH +IDTS+L+ G ++ LK + +L + IQ HD+ EDAR ++L
Sbjct: 62 LKMIHPYVIDTSLLYVREQGRRFK--LKFLAKVILGKDIQCPDRLGHDATEDARTILEL 118
>RGD|1305051 [details] [associations]
symbol:Aen "apoptosis enhancing nuclease" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA;ISO;ISS]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005654 "nucleoplasm"
evidence=IEA;ISO;ISS] [GO:0005730 "nucleolus" evidence=IEA;ISO;ISS]
[GO:0010212 "response to ionizing radiation" evidence=IEA;ISO;ISS]
[GO:0042771 "intrinsic apoptotic signaling pathway in response to
DNA damage by p53 class mediator" evidence=IEA;ISO;ISS]
InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479 Pfam:PF00929
RGD:1305051 GO:GO:0005654 GO:GO:0005730 GO:GO:0042771 EMBL:CH473980
GO:GO:0003676 GO:GO:0010212 GO:GO:0004527 CTD:64782 eggNOG:COG0847
HOGENOM:HOG000182422 HOVERGEN:HBG100435 OrthoDB:EOG4P8FJM
InterPro:IPR013520 SUPFAM:SSF53098 GeneTree:ENSGT00520000055542
EMBL:BC166435 IPI:IPI00365766 RefSeq:NP_001101957.1
UniGene:Rn.46887 ProteinModelPortal:B2GUW6 SMR:B2GUW6 PRIDE:B2GUW6
Ensembl:ENSRNOT00000064438 GeneID:361594 KEGG:rno:361594
UCSC:RGD:1305051 NextBio:676841 Genevestigator:B2GUW6
Uniprot:B2GUW6
Length = 332
Score = 221 (82.9 bits), Expect = 2.8e-18, P = 2.8e-18
Identities = 79/245 (32%), Positives = 121/245 (49%)
Query: 2 KRRRRSDEKRLKAKSLT----SMSVWERKSLFRKLPPRTGFNPVCT--SGLRISALDHVG 55
KRR R ++ + K+L S+S+ L LP T P T SG R
Sbjct: 25 KRRSRQHQRFMARKALLQEQESLSMVPGPGLC-PLPSPTQ-TPAGTEASGNRKQRTKARS 82
Query: 56 GINGPLEGYVKTKPRKSPPPNGYGVYALDTEMVYT-VHGL--EVARVTVVNVDGRLIYNT 112
G G + PR++P A+D EMV T G E+AR +VV+ G ++Y+
Sbjct: 83 GSKGLCSK--RPVPREAPSSGPSKYVAIDCEMVGTGPQGRVSELARCSVVSYSGDVLYDK 140
Query: 113 LVKPDCEIIDYNTKYSGISAKDFIRN-PYKTLKDVQNDLMGFVSKDSIIVGHGLENDLRA 171
++P+ I+DY T++SGI+ + + P++ Q +++ + K ++VGH L ND +A
Sbjct: 141 YIRPEMPIVDYRTRWSGITRQHMHKAIPFQV---AQKEILKLL-KGKVVVGHALHNDFQA 196
Query: 172 LKLIH--SNIIDTSVLFPHSFGLPY-----RRSLKSIVSQLLHQSIQSGTH--DSFEDAR 222
LK +H S I DT+ + P+ P R SLK + LLH+ IQ G H S EDA
Sbjct: 197 LKYVHPGSQIRDTTYV-PNLLSQPSSLTRARVSLKDLALNLLHKKIQVGHHGHSSVEDAM 255
Query: 223 ACIDL 227
++L
Sbjct: 256 TAMEL 260
>UNIPROTKB|Q2YDK1 [details] [associations]
symbol:ISG20L2 "Interferon-stimulated 20 kDa
exonuclease-like 2" species:9913 "Bos taurus" [GO:0005730
"nucleolus" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 GO:GO:0005730
GO:GO:0003676 GO:GO:0042254 GO:GO:0004527 GO:GO:0090305
eggNOG:COG0847 HOGENOM:HOG000182422 InterPro:IPR013520
SUPFAM:SSF53098 GeneTree:ENSGT00520000055542 EMBL:BC110186
IPI:IPI00711321 RefSeq:NP_001039682.1 UniGene:Bt.80589
ProteinModelPortal:Q2YDK1 SMR:Q2YDK1 PRIDE:Q2YDK1
Ensembl:ENSBTAT00000001989 GeneID:515980 KEGG:bta:515980 CTD:81875
HOVERGEN:HBG107986 InParanoid:Q2YDK1 OMA:GTGPKGH OrthoDB:EOG4H4641
NextBio:20872080 Uniprot:Q2YDK1
Length = 349
Score = 222 (83.2 bits), Expect = 3.2e-18, P = 3.2e-18
Identities = 59/164 (35%), Positives = 93/164 (56%)
Query: 82 ALDTEMVYTV---HGLEVARVTVVNVDGRLIYNTLVKPDCEIIDYNTKYSGISAKDFIR- 137
A+D EMV T H +AR ++VN DG ++Y+ + P C I+DY T++SGI + +
Sbjct: 177 AIDCEMVGTGPKGHVSSLARCSIVNYDGDVLYDEYILPPCHIVDYRTRWSGIRKQHMVNA 236
Query: 138 NPYKTLKDVQNDLMGFVSKDSIIVGHGLENDLRALKLIHSNII--DTS--VLFPHSFGLP 193
P+K + N ++ ++ I+VGH + ND +AL+ IH + DTS L P
Sbjct: 237 TPFKIAR---NQILKILA-GKIVVGHAIHNDFKALQYIHPKSLTRDTSHIPLLNRKADCP 292
Query: 194 YRR--SLKSIVSQLLHQSIQSGT--HDSFEDARACIDLILWKLL 233
SLKS+ +LL++ IQ+G H S EDA+A ++L +KL+
Sbjct: 293 ENATMSLKSLTKKLLNRDIQAGKSGHSSVEDAQATMEL--YKLV 334
>UNIPROTKB|F8WG03 [details] [associations]
symbol:Aen "Apoptosis-enhancing nuclease" species:10116
"Rattus norvegicus" [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479
Pfam:PF00929 RGD:1305051 GO:GO:0003676 GO:GO:0005622 GO:GO:0004527
InterPro:IPR013520 SUPFAM:SSF53098 IPI:IPI00949441
Ensembl:ENSRNOT00000024962 OMA:GMVPREV Uniprot:F8WG03
Length = 355
Score = 221 (82.9 bits), Expect = 4.6e-18, P = 4.6e-18
Identities = 79/245 (32%), Positives = 121/245 (49%)
Query: 2 KRRRRSDEKRLKAKSLT----SMSVWERKSLFRKLPPRTGFNPVCT--SGLRISALDHVG 55
KRR R ++ + K+L S+S+ L LP T P T SG R
Sbjct: 48 KRRSRQHQRFMARKALLQEQESLSMVPGPGLC-PLPSPTQ-TPAGTEASGNRKQRTKARS 105
Query: 56 GINGPLEGYVKTKPRKSPPPNGYGVYALDTEMVYT-VHGL--EVARVTVVNVDGRLIYNT 112
G G + PR++P A+D EMV T G E+AR +VV+ G ++Y+
Sbjct: 106 GSKGLCSK--RPVPREAPSSGPSKYVAIDCEMVGTGPQGRVSELARCSVVSYSGDVLYDK 163
Query: 113 LVKPDCEIIDYNTKYSGISAKDFIRN-PYKTLKDVQNDLMGFVSKDSIIVGHGLENDLRA 171
++P+ I+DY T++SGI+ + + P++ Q +++ + K ++VGH L ND +A
Sbjct: 164 YIRPEMPIVDYRTRWSGITRQHMHKAIPFQV---AQKEILKLL-KGKVVVGHALHNDFQA 219
Query: 172 LKLIH--SNIIDTSVLFPHSFGLPY-----RRSLKSIVSQLLHQSIQSGTH--DSFEDAR 222
LK +H S I DT+ + P+ P R SLK + LLH+ IQ G H S EDA
Sbjct: 220 LKYVHPGSQIRDTTYV-PNLLSQPSSLTRARVSLKDLALNLLHKKIQVGHHGHSSVEDAM 278
Query: 223 ACIDL 227
++L
Sbjct: 279 TAMEL 283
>FB|FBgn0036405 [details] [associations]
symbol:CG6833 species:7227 "Drosophila melanogaster"
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479
Pfam:PF00929 EMBL:AE014296 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 EMBL:AY060760 RefSeq:NP_001189105.1
RefSeq:NP_648689.1 UniGene:Dm.3871 SMR:Q9VUC3 IntAct:Q9VUC3
STRING:Q9VUC3 EnsemblMetazoa:FBtr0075774 EnsemblMetazoa:FBtr0302433
GeneID:39559 KEGG:dme:Dmel_CG6833 UCSC:CG6833-RA
FlyBase:FBgn0036405 InParanoid:Q9VUC3 OMA:GQEIQTG OrthoDB:EOG4PK0R4
GenomeRNAi:39559 NextBio:814273 Uniprot:Q9VUC3
Length = 290
Score = 218 (81.8 bits), Expect = 5.8e-18, P = 5.8e-18
Identities = 64/177 (36%), Positives = 92/177 (51%)
Query: 58 NGPLEGYVKTKPRKSPPPNGYGVYALDTEMVYTVHGLE---VARVTVVNVDGRLIYNTLV 114
+ PL + + +K N + A+D EMV H +ARV++VN G ++ + V
Sbjct: 97 SAPLSKSARMRMKKKAHRNR--ILAMDCEMVGVGHNTRDDMLARVSIVNRMGHVLLDKYV 154
Query: 115 KPDCEIIDYNTKYSGISAKDFIRNPYKTLKDVQNDLMGFVSKDSIIVGHGLENDLRALKL 174
KP E+ DY T SGI +D I N + VQN++M + I+VGHGL NDL L +
Sbjct: 155 KPRKEVTDYRTSVSGIRPQD-IANG-EDFAAVQNEVMKLIH-GRILVGHGLRNDLAVLGI 211
Query: 175 IHS--NIIDTSVLFP--HSFGLPYRRSLKSIVSQLLHQSIQSGTHDSFEDARACIDL 227
H +I DTS P + SLK + +L Q IQ+G H+S EDARA + +
Sbjct: 212 RHPFHDIRDTSHYKPLCKLISNTHTPSLKRLTKAVLGQEIQTGEHNSVEDARAAMGI 268
>UNIPROTKB|Q8WTP8 [details] [associations]
symbol:AEN "Apoptosis-enhancing nuclease" species:9606
"Homo sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0010212 "response to ionizing radiation"
evidence=IDA] [GO:0004527 "exonuclease activity" evidence=IDA]
[GO:0042771 "intrinsic apoptotic signaling pathway in response to
DNA damage by p53 class mediator" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0005654 GO:GO:0005730
GO:GO:0042771 GO:GO:0003676 GO:GO:0010212 GO:GO:0004527
EMBL:AF327352 EMBL:AC013489 EMBL:CH471101 EMBL:BC005164
EMBL:BC014407 EMBL:BC020988 EMBL:AK022546 IPI:IPI00074083
IPI:IPI00141525 RefSeq:NP_073604.3 UniGene:Hs.436102
ProteinModelPortal:Q8WTP8 SMR:Q8WTP8 STRING:Q8WTP8
PhosphoSite:Q8WTP8 DMDM:296434390 PRIDE:Q8WTP8 DNASU:64782
Ensembl:ENST00000332810 Ensembl:ENST00000379231 GeneID:64782
KEGG:hsa:64782 UCSC:uc002bmt.2 CTD:64782 GeneCards:GC15P089164
H-InvDB:HIX0012556 HGNC:HGNC:25722 HPA:HPA048599 MIM:610177
neXtProt:NX_Q8WTP8 PharmGKB:PA162375720 eggNOG:COG0847
HOGENOM:HOG000182422 HOVERGEN:HBG100435 OMA:HKRKSRQ
OrthoDB:EOG4P8FJM PhylomeDB:Q8WTP8 GenomeRNAi:64782 NextBio:66818
ArrayExpress:Q8WTP8 Bgee:Q8WTP8 CleanEx:HS_AEN
Genevestigator:Q8WTP8 InterPro:IPR013520 SUPFAM:SSF53098
Uniprot:Q8WTP8
Length = 325
Score = 218 (81.8 bits), Expect = 5.8e-18, P = 5.8e-18
Identities = 75/242 (30%), Positives = 118/242 (48%)
Query: 10 KRLKAKSLTSMSVWERKSLFRK-----LPPRTGFNPVCTSGLRISALDHVGGINGPLEGY 64
KR K +S RK+L ++ +PP G +P+ T +A + L
Sbjct: 28 KRHKRRSRQHQRFMARKALLQEQGLLSMPPEPGSSPLPTPFGAATATEAASSGKQCLRAG 87
Query: 65 VKTKP--RKSPPPNGYG-----VYALDTEMVYT-VHGL--EVARVTVVNVDGRLIYNTLV 114
+ P R+ P G A+D EMV T G E+AR ++V+ G ++Y+ +
Sbjct: 88 SGSAPCSRRPAPGKASGPLPSKCVAIDCEMVGTGPRGRVSELARCSIVSYHGNVLYDKYI 147
Query: 115 KPDCEIIDYNTKYSGISAKDFIRN-PYKTLKDVQNDLMGFVSKDSIIVGHGLENDLRALK 173
+P+ I DY T++SGI+ + + P++ Q +++ + K ++VGH L ND +ALK
Sbjct: 148 RPEMPIADYRTRWSGITRQHMRKAVPFQV---AQKEILKLL-KGKVVVGHALHNDFQALK 203
Query: 174 LIH--SNIIDTSVL--FPHSFGLPYRR--SLKSIVSQLLHQSIQSGTH--DSFEDARACI 225
+H S DT+ + F GL R SLK + QLLH+ IQ G H S EDA +
Sbjct: 204 YVHPRSQTRDTTYVPNFLSEPGLHTRARVSLKDLALQLLHKKIQVGQHGHSSVEDATTAM 263
Query: 226 DL 227
+L
Sbjct: 264 EL 265
>TAIR|locus:2155563 [details] [associations]
symbol:SDN3 "small RNA degrading nuclease 3" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0016592 "mediator complex" evidence=IDA]
InterPro:IPR006055 InterPro:IPR012337 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00479 Pfam:PF00929 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006355 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0006351 GO:GO:0003723 GO:GO:0004527
GO:GO:0090305 eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098
EMBL:AB020742 GO:GO:0016592 KO:K14570 UniGene:At.28408
UniGene:At.71151 EMBL:AY080843 EMBL:BT001977 IPI:IPI00524191
RefSeq:NP_201525.2 ProteinModelPortal:Q8RXK2 SMR:Q8RXK2
IntAct:Q8RXK2 STRING:Q8RXK2 PaxDb:Q8RXK2 PRIDE:Q8RXK2
EnsemblPlants:AT5G67240.1 GeneID:836859 KEGG:ath:AT5G67240
TAIR:At5g67240 HOGENOM:HOG000154279 InParanoid:Q8RXK2 OMA:LYVRKMV
PhylomeDB:Q8RXK2 ProtClustDB:CLSN2918891 Genevestigator:Q8RXK2
Uniprot:Q8RXK2
Length = 782
Score = 228 (85.3 bits), Expect = 7.2e-18, P = 7.2e-18
Identities = 62/192 (32%), Positives = 103/192 (53%)
Query: 46 LRISALDHVGGINGP--LEGYVKTK--PRKSPPPNGYGVYALDTEMVYTVHGLE-VARVT 100
L I+ D+ G P E + T+ +KS + ++D EMV G + + RV
Sbjct: 107 LTITHDDYPGNYTFPSYAEDWYVTELGKKKSKVIKSTRMLSIDCEMVTCEDGSQALVRVG 166
Query: 101 VVNVDGRLIYNTLVKPDCEIIDYNTKYSGISAKDFIRNPYKTLKDVQNDLMGFVSKDSII 160
V+ D +++ + VKPD +IDY T +G++A+D R ++ D+Q L F+S +I+
Sbjct: 167 AVDRDLKVVLDKFVKPDKPVIDYKTDITGVTAEDLERATL-SVADIQKKLRRFLSVGTIL 225
Query: 161 VGHGLENDLRALKLIHSNIIDTSVLFPHSFGLPYRR-SLKSIVSQLLHQSIQ--SGTHDS 217
VGHGL NDL+ L++ H+ +IDTS +F +R SL ++ +L Q ++ H+
Sbjct: 226 VGHGLHNDLQVLRIDHARVIDTSYVFEFVDAPKTQRPSLNNLCKSVLGQEVRMDGAAHNC 285
Query: 218 FEDARACIDLIL 229
DA A + L+L
Sbjct: 286 VHDAAAAMKLVL 297
>UNIPROTKB|F1MZX4 [details] [associations]
symbol:LOC614749 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0042771 "intrinsic apoptotic signaling pathway in
response to DNA damage by p53 class mediator" evidence=IEA]
[GO:0010212 "response to ionizing radiation" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005654 "nucleoplasm"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 GO:GO:0005654
GO:GO:0005730 GO:GO:0042771 GO:GO:0003676 GO:GO:0010212
GO:GO:0004527 OMA:HKRKSRQ InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 EMBL:DAAA02052106 IPI:IPI00714615
Ensembl:ENSBTAT00000023454 Uniprot:F1MZX4
Length = 325
Score = 217 (81.4 bits), Expect = 7.5e-18, P = 7.5e-18
Identities = 79/245 (32%), Positives = 117/245 (47%)
Query: 2 KRRRRSDEKRLKAKSLTS----MS-VWERKSLFRKLPPRTGFNP--VCTSGLRISALDHV 54
KR+ R ++ + K+L +S +WE LP G P TS R
Sbjct: 31 KRKSRQHQRFMARKALLQEQGLLSPLWEPGP--SPLPTLPGAPPGTEATSSARQRPRAEP 88
Query: 55 GGINGPLEGYVKTKPRKSPPPNGYGVYALDTEMVYT-VHGL--EVARVTVVNVDGRLIYN 111
GG K PR S P A+D EMV T G E+AR +VV+ G ++Y+
Sbjct: 89 GGAGCSR----KPAPRDSAGPLPSKCVAIDCEMVGTGPRGRVSELARCSVVSYHGEVLYD 144
Query: 112 TLVKPDCEIIDYNTKYSGISAKDFIRN-PYKTLKDVQNDLMGFVSKDSIIVGHGLENDLR 170
++P+ I+DY T++SGI+ + + P++ Q +++ + K ++VGH L ND +
Sbjct: 145 KYIRPEMPIVDYRTRWSGITRQHMRKAIPFQV---AQKEILKLL-KGKVVVGHALHNDFQ 200
Query: 171 ALKLIH--SNIIDT----SVLFPHSFGLPYRRSLKSIVSQLLHQSIQSGTH--DSFEDAR 222
ALK IH DT S+L + R SLK + QLLH+ IQ G H S EDA
Sbjct: 201 ALKYIHPRGQTRDTTSVPSLLSQPGLHVRNRVSLKDLALQLLHKKIQVGQHGHSSVEDAV 260
Query: 223 ACIDL 227
++L
Sbjct: 261 TAMEL 265
>TAIR|locus:2086320 [details] [associations]
symbol:AT3G15080 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA;ISS] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0009165 "nucleotide biosynthetic process"
evidence=RCA] InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479
Pfam:PF00929 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003676
GO:GO:0005622 GO:GO:0004527 eggNOG:COG0847 HOGENOM:HOG000182422
InterPro:IPR013520 SUPFAM:SSF53098 EMBL:AY087954 EMBL:BT024904
EMBL:EU682310 EMBL:AK228883 IPI:IPI00522165 RefSeq:NP_566499.1
UniGene:At.39112 ProteinModelPortal:Q8LAA0 STRING:Q8LAA0
PaxDb:Q8LAA0 PRIDE:Q8LAA0 EnsemblPlants:AT3G15080.1 GeneID:820738
KEGG:ath:AT3G15080 TAIR:At3g15080 InParanoid:Q8LAA0 OMA:CPIEDAR
PhylomeDB:Q8LAA0 ProtClustDB:CLSN2688390 Genevestigator:Q8LAA0
Uniprot:Q8LAA0
Length = 275
Score = 214 (80.4 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 58/150 (38%), Positives = 83/150 (55%)
Query: 82 ALDTEMVYTVHGLEVA--RVTVVNVDGRLIYNTLVKPDCEIIDYNTKYSGISAKDFIRNP 139
A+D EMV G + A RVT+VN G ++Y+ V+P ++D+ T SGI +D +R
Sbjct: 85 AMDCEMVGVSQGTKSALGRVTLVNKWGNVLYDEFVRPVEHVVDFRTSISGIRPRD-LRKA 143
Query: 140 YKTLKDVQNDLMGFVSKDSIIVGHGLENDLRALKLIH--SNIIDTSVLFPHSFGLPYRRS 197
K + Q + + K I+VGH L NDL+AL L H +I DT P G R+S
Sbjct: 144 -KDFRVAQTKVAELI-KGKILVGHALHNDLKALLLTHPKKDIRDTGEYQPFLKGKT-RKS 200
Query: 198 LKSIVSQLLHQSIQSGTHDSFEDARACIDL 227
LK + S++L IQ+G H +DARA + L
Sbjct: 201 LKHLASEILGADIQNGEHCPIDDARAAMML 230
>UNIPROTKB|F1SRT3 [details] [associations]
symbol:AEN "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042771 "intrinsic apoptotic signaling pathway in
response to DNA damage by p53 class mediator" evidence=IEA]
[GO:0010212 "response to ionizing radiation" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005654 "nucleoplasm"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 GO:GO:0005654
GO:GO:0005730 GO:GO:0042771 GO:GO:0003676 GO:GO:0010212
GO:GO:0004527 OMA:HKRKSRQ InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 EMBL:FP017226 RefSeq:XP_003121906.1
UniGene:Ssc.43796 Ensembl:ENSSSCT00000005624 GeneID:100522657
KEGG:ssc:100522657 Uniprot:F1SRT3
Length = 325
Score = 213 (80.0 bits), Expect = 2.1e-17, P = 2.1e-17
Identities = 61/175 (34%), Positives = 95/175 (54%)
Query: 66 KTKPRKSPPPNGYGVYALDTEMVYT-VHGL--EVARVTVVNVDGRLIYNTLVKPDCEIID 122
K PR+S P A+D EMV T G E+AR +VV+ G ++Y+ ++P+ I+D
Sbjct: 96 KPTPRESAGPLPSKCVAIDCEMVGTGPRGRVSELARCSVVSYYGDVLYDKYIRPEMPIVD 155
Query: 123 YNTKYSGISAKDFIRN-PYKTLKDVQNDLMGFVSKDSIIVGHGLENDLRALKLIH--SNI 179
Y T++SGI+ + + P++ Q +++ + K ++VGH L ND +ALK +H
Sbjct: 156 YRTRWSGITRQHMRKAIPFQV---AQKEILKLL-KGKVVVGHALHNDFQALKYVHPRGQT 211
Query: 180 IDTSVLFPHSFGLP-----YRRSLKSIVSQLLHQSIQSGTH--DSFEDARACIDL 227
DT+ + P+ P R SLK + QLLH+ IQ G H S EDA ++L
Sbjct: 212 RDTTYV-PNLLSQPGLHTRTRVSLKDLALQLLHKKIQVGQHGHSSVEDAVTAMEL 265
>UNIPROTKB|H9L3P2 [details] [associations]
symbol:H9L3P2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 EMBL:AADN02034596 EMBL:AADN02034597
Ensembl:ENSGALT00000040831 OMA:PTEPIVD Uniprot:H9L3P2
Length = 328
Score = 213 (80.0 bits), Expect = 2.3e-17, P = 2.3e-17
Identities = 71/209 (33%), Positives = 108/209 (51%)
Query: 31 KLPPR-TGFNPVCTSGLRISALDHVGGINGPLEGYVKTKPRKSPPPNGYGVYALDTEMVY 89
K+P R TG P + ++ A+D + PL V+ PPP+ + A+D EMV
Sbjct: 112 KVPFRSTGLPPPPS---KLVAID----LKKPLRAPVRATGLP-PPPSK--LVAIDCEMVG 161
Query: 90 TVHG---LEVARVTVVNVDGRLIYNTLVKPDCEIIDYNTKYSGISAKDFIRNPYKTLKDV 146
T G +AR ++V +G ++Y++ V+P I+DY T++SGI K + N K
Sbjct: 162 TGPGGCTSSLARCSIVGYEGDVLYDSYVRPTEPIVDYRTRWSGIRKKHMV-NAVPFCK-A 219
Query: 147 QNDLMGFVSKDSIIVGHGLENDLRALKLIHSNII--DTSV--LFPHSFGLPYRR--SLKS 200
Q +++ +S ++VGH + ND +ALK H + DTS L G P SLK
Sbjct: 220 QREILKILS-GKVVVGHAVHNDFKALKYSHPKELTRDTSKIPLLNQKGGFPENVAISLKR 278
Query: 201 IVSQLLHQSIQSGT--HDSFEDARACIDL 227
+ +LLH+ IQ G H S EDAR ++L
Sbjct: 279 LAKELLHKDIQVGKSGHCSVEDARTTMEL 307
>ZFIN|ZDB-GENE-070928-8 [details] [associations]
symbol:isg20l2 "interferon stimulated exonuclease
gene 20-like 2" species:7955 "Danio rerio" [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479 Pfam:PF00929
ZFIN:ZDB-GENE-070928-8 GO:GO:0003676 GO:GO:0005622 GO:GO:0004527
eggNOG:COG0847 HOGENOM:HOG000182422 InterPro:IPR013520
SUPFAM:SSF53098 GeneTree:ENSGT00520000055542 CTD:81875
OrthoDB:EOG4H4641 EMBL:AL954306 EMBL:BC152518 IPI:IPI00931450
RefSeq:NP_001096663.1 UniGene:Dr.87096 Ensembl:ENSDART00000109664
GeneID:558447 KEGG:dre:558447 HOVERGEN:HBG095874 InParanoid:A3KH10
NextBio:20882472 Uniprot:A3KH10
Length = 321
Score = 212 (79.7 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 60/167 (35%), Positives = 88/167 (52%)
Query: 74 PPNGYGVYALDTEMVYT-VHGL--EVARVTVVNVDGRLIYNTLVKPDCEIIDYNTKYSGI 130
PP ALD EMV T G E+AR ++V+ DG ++Y+ VKP + DY T++SGI
Sbjct: 130 PPGPIKYLALDCEMVGTGPKGAQSELARCSIVSYDGDVVYDKYVKPINPVTDYRTRWSGI 189
Query: 131 SAKDFIR-NP-YKTLKDVQNDLMGFVSKDSIIVGHGLENDLRALKLIHS--NIIDTS--V 184
+D + P Y K++ + G ++VGH + ND +ALK H DTS
Sbjct: 190 RRQDLLHATPFYHAQKEIVKIITG-----KVVVGHAIHNDFKALKYFHPAFQTRDTSRIP 244
Query: 185 LFPHSFGLPYRR--SLKSIVSQLLHQSIQSGT--HDSFEDARACIDL 227
L G P ++ SLK + +L + IQ+G H S EDA+A ++L
Sbjct: 245 LLNEKAGFPEKQCVSLKKLTQAILKRDIQTGYRGHSSVEDAKATMEL 291
>UNIPROTKB|H9L3P1 [details] [associations]
symbol:H9L3P1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 EMBL:AADN02034596 EMBL:AADN02034597
Ensembl:ENSGALT00000040830 Uniprot:H9L3P1
Length = 327
Score = 211 (79.3 bits), Expect = 3.9e-17, P = 3.9e-17
Identities = 60/166 (36%), Positives = 90/166 (54%)
Query: 73 PPPNGYGVYALDTEMVYTVHG---LEVARVTVVNVDGRLIYNTLVKPDCEIIDYNTKYSG 129
PPP+ + A+D EMV T G +AR ++V +G ++Y++ V+P I+DY T++SG
Sbjct: 146 PPPSK--LVAIDCEMVGTGPGGCTSSLARCSIVGYEGDVLYDSYVRPTEPIVDYRTRWSG 203
Query: 130 ISAKDFIRNPYKTLKDVQNDLMGFVSKDSIIVGHGLENDLRALKLIHSNII--DTSV--L 185
I K + N K Q +++ +S ++VGH + ND +ALK H + DTS L
Sbjct: 204 IRKKHMV-NAVPFCK-AQREILKILS-GKVVVGHAVHNDFKALKYSHPKELTRDTSKIPL 260
Query: 186 FPHSFGLPYRR--SLKSIVSQLLHQSIQSGT--HDSFEDARACIDL 227
G P SLK + +LLH+ IQ G H S EDAR ++L
Sbjct: 261 LNQKGGFPENVAISLKRLAKELLHKDIQVGKSGHCSVEDARTTMEL 306
>UNIPROTKB|E2QS77 [details] [associations]
symbol:ISG20L2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 GO:GO:0005634
GO:GO:0003676 GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 CTD:81875 OMA:GTGPKGH
EMBL:AAEX03005314 RefSeq:XP_547530.2 Ensembl:ENSCAFT00000026521
GeneID:490409 KEGG:cfa:490409 NextBio:20863435 Uniprot:E2QS77
Length = 348
Score = 205 (77.2 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 56/164 (34%), Positives = 90/164 (54%)
Query: 82 ALDTEMVYTV---HGLEVARVTVVNVDGRLIYNTLVKPDCEIIDYNTKYSGISAKDFIR- 137
A+D EMV T H +AR ++VN G ++Y+ + P C I+DY T++SGI + +
Sbjct: 176 AIDCEMVGTGPKGHVSSLARCSIVNYHGDVLYDEYILPPCHIVDYRTRWSGIRKQHMVNA 235
Query: 138 NPYKTLKDVQNDLMGFVSKDSIIVGHGLENDLRALKLIHSNII--DTSVLFP--HSFGLP 193
P+K + ++ ++ I+VGH + ND +AL+ H + DTS + P P
Sbjct: 236 TPFKVAR---GQILKILT-GKIVVGHAIHNDFKALQYFHPKSLTRDTSHIPPLNRKADCP 291
Query: 194 YRR--SLKSIVSQLLHQSIQSGT--HDSFEDARACIDLILWKLL 233
SLKS+ +LL++ IQ G H S EDA+A ++L +KL+
Sbjct: 292 ENATMSLKSLTKKLLNRDIQVGKSGHSSVEDAQATMEL--YKLV 333
>UNIPROTKB|Q9H9L3 [details] [associations]
symbol:ISG20L2 "Interferon-stimulated 20 kDa
exonuclease-like 2" species:9606 "Homo sapiens" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004527 "exonuclease
activity" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IDA] InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479
Pfam:PF00929 GO:GO:0005634 GO:GO:0005730 GO:GO:0003676
GO:GO:0042254 GO:GO:0004527 GO:GO:0090305 eggNOG:COG0847
HOGENOM:HOG000182422 InterPro:IPR013520 SUPFAM:SSF53098
EMBL:CH471121 KO:K01175 EMBL:AL590666 CTD:81875 HOVERGEN:HBG107986
OMA:GTGPKGH OrthoDB:EOG4H4641 EMBL:AY391837 EMBL:AK022733
EMBL:BC000575 IPI:IPI00008963 RefSeq:NP_112242.1 UniGene:Hs.301904
ProteinModelPortal:Q9H9L3 IntAct:Q9H9L3 MINT:MINT-1457372
STRING:Q9H9L3 PhosphoSite:Q9H9L3 DMDM:42559527 SWISS-2DPAGE:Q9H9L3
PaxDb:Q9H9L3 PeptideAtlas:Q9H9L3 PRIDE:Q9H9L3 DNASU:81875
Ensembl:ENST00000313146 Ensembl:ENST00000368219 GeneID:81875
KEGG:hsa:81875 UCSC:uc001fps.1 GeneCards:GC01M156691
HGNC:HGNC:25745 HPA:HPA028005 MIM:611930 neXtProt:NX_Q9H9L3
PharmGKB:PA142671650 InParanoid:Q9H9L3 PhylomeDB:Q9H9L3
ChiTaRS:ISG20L2 GenomeRNAi:81875 NextBio:72218 Bgee:Q9H9L3
CleanEx:HS_ISG20L2 Genevestigator:Q9H9L3 GermOnline:ENSG00000143319
Uniprot:Q9H9L3
Length = 353
Score = 201 (75.8 bits), Expect = 8.9e-16, P = 8.9e-16
Identities = 55/164 (33%), Positives = 90/164 (54%)
Query: 82 ALDTEMVYTV---HGLEVARVTVVNVDGRLIYNTLVKPDCEIIDYNTKYSGISAKDFIR- 137
A+D EMV T H +AR ++VN +G ++Y+ + P C I+DY T++SGI + +
Sbjct: 181 AIDCEMVGTGPKGHVSSLARCSIVNYNGDVLYDEYILPPCHIVDYRTRWSGIRKQHMVNA 240
Query: 138 NPYKTLKDVQNDLMGFVSKDSIIVGHGLENDLRALKLIHSNII--DTSVLFP--HSFGLP 193
P+K + ++ ++ I+VGH + ND +AL+ H + DTS + P P
Sbjct: 241 TPFKIAR---GQILKILT-GKIVVGHAIHNDFKALQYFHPKSLTRDTSHIPPLNRKADCP 296
Query: 194 YRR--SLKSIVSQLLHQSIQSGT--HDSFEDARACIDLILWKLL 233
SLK + +LL++ IQ G H S EDA+A ++L +KL+
Sbjct: 297 ENATMSLKHLTKKLLNRDIQVGKSGHSSVEDAQATMEL--YKLV 338
>RGD|1359413 [details] [associations]
symbol:Isg20l2 "interferon stimulated exonuclease gene 20-like
2" species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004527 "exonuclease activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005730
"nucleolus" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=ISO] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 RGD:1359413 GO:GO:0005730 GO:GO:0003676
GO:GO:0042254 GO:GO:0004527 GO:GO:0090305 eggNOG:COG0847
HOGENOM:HOG000182422 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 CTD:81875 HOVERGEN:HBG107986
OrthoDB:EOG4H4641 EMBL:BC079314 IPI:IPI00373225
RefSeq:NP_001007742.1 UniGene:Rn.56954 ProteinModelPortal:Q6AXU3
PRIDE:Q6AXU3 Ensembl:ENSRNOT00000015471 GeneID:361977
KEGG:rno:361977 UCSC:RGD:1359413 InParanoid:Q6AXU3 OMA:ESGARTF
NextBio:678262 Genevestigator:Q6AXU3 Uniprot:Q6AXU3
Length = 369
Score = 200 (75.5 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 56/164 (34%), Positives = 91/164 (55%)
Query: 82 ALDTEMVYT-VHGL--EVARVTVVNVDGRLIYNTLVKPDCEIIDYNTKYSGISAKDFIR- 137
A+D EMV T G +AR ++VN +G ++Y+ ++P C I+DY T++SGI +
Sbjct: 197 AIDCEMVGTGPKGRVSSLARCSIVNYNGDVLYDEYIRPPCYIVDYRTRWSGIRKCHMVNA 256
Query: 138 NPYKTLKDVQNDLMGFVSKDSIIVGHGLENDLRALKLIHSNII--DTSV--LFPHSFGLP 193
P+KT + + ++ +S ++VGH + ND +AL+ H + DTS L P
Sbjct: 257 TPFKTAR---SQILKILS-GKVVVGHAIHNDYKALQYFHPKSLTRDTSQIPLLNRKADCP 312
Query: 194 YR--RSLKSIVSQLLHQSIQSGT--HDSFEDARACIDLILWKLL 233
SLK + +LL + IQ+G H S EDA+A ++L +KL+
Sbjct: 313 ENVTLSLKHLTKKLLSRDIQTGLSGHSSVEDAQATLEL--YKLV 354
>UNIPROTKB|F1RHI9 [details] [associations]
symbol:ISG20L2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0005634 GO:GO:0003676
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 OMA:GTGPKGH EMBL:CU582900
RefSeq:XP_001924782.1 UniGene:Ssc.54513 Ensembl:ENSSSCT00000007088
GeneID:100157573 KEGG:ssc:100157573 Uniprot:F1RHI9
Length = 343
Score = 198 (74.8 bits), Expect = 1.7e-15, P = 1.7e-15
Identities = 55/164 (33%), Positives = 89/164 (54%)
Query: 82 ALDTEMVYTV---HGLEVARVTVVNVDGRLIYNTLVKPDCEIIDYNTKYSGISAKDFIR- 137
A+D EMV T H +AR ++VN +G ++Y+ + P C I+DY T++SGI + +
Sbjct: 171 AIDCEMVGTGPKGHVSSLARCSIVNYNGDVLYDEYILPPCHIVDYRTRWSGIRKQHMVNA 230
Query: 138 NPYKTLKDVQNDLMGFVSKDSIIVGHGLENDLRALKLIHSNII--DTS--VLFPHSFGLP 193
P+K + + ++ ++ I+VGH + ND +AL+ H + DTS L P
Sbjct: 231 TPFKIAR---SQILKILT-GKIVVGHAIHNDFKALQYFHPKSLTRDTSHIPLLNRKADCP 286
Query: 194 YRR--SLKSIVSQLLHQSIQSGT--HDSFEDARACIDLILWKLL 233
SLK + +LL + IQ G H S EDA+A ++L +KL+
Sbjct: 287 ENATMSLKRLTKKLLDRDIQVGKSGHSSVEDAQATMEL--YKLV 328
>POMBASE|SPBC1604.09c [details] [associations]
symbol:SPBC1604.09c "exoribonuclease Rex4 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IDA] [GO:0006364
"rRNA processing" evidence=ISO] [GO:0008408 "3'-5' exonuclease
activity" evidence=ISO] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 PomBase:SPBC1604.09c Pfam:PF00929 GO:GO:0005730
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003676
eggNOG:COG0847 HOGENOM:HOG000182422 InterPro:IPR013520
SUPFAM:SSF53098 GO:GO:0008408 GO:GO:0006364 KO:K01175 OMA:NDIPESQ
PIR:T39505 RefSeq:NP_596631.1 ProteinModelPortal:O94375
STRING:O94375 EnsemblFungi:SPBC1604.09c.1 GeneID:2540203
KEGG:spo:SPBC1604.09c OrthoDB:EOG4TB7M4 NextBio:20801335
Uniprot:O94375
Length = 260
Score = 194 (73.4 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 55/155 (35%), Positives = 85/155 (54%)
Query: 79 GVY-ALDTEMVYTVHGLEV-ARVTVVNVDGRLIYNTLVKPDCEIIDYNTKYSGISAKDFI 136
G Y A+D EMV + V ARV++VN G ++Y+T V+P ++ D+ T SG+ K F
Sbjct: 91 GKYIAMDCEMVGVADDMSVLARVSIVNYHGHVVYDTYVRPKEKVTDWRTWVSGV--KSFH 148
Query: 137 RNPYKTLKDVQNDLMGFVSKDSIIVGHGLENDLRALKLIHSN--IIDTSVLFPHSFGLPY 194
+ + VQ ++ + + ++VGH + NDL+ L L H I DTS F L
Sbjct: 149 MRDAPSFEKVQAEVAKILD-NRVLVGHAVHNDLKVLLLSHPRRMIRDTS-RFSGYRKLAK 206
Query: 195 RRS--LKSIVSQLLHQSIQSGTHDSFEDARACIDL 227
R+ LK + +L + IQSG H S +DA+A ++L
Sbjct: 207 GRTPGLKKLAEVILGRDIQSGQHSSVQDAQATMEL 241
>RGD|1306407 [details] [associations]
symbol:Isg20 "interferon stimulated exonuclease gene 20"
species:10116 "Rattus norvegicus" [GO:0000175
"3'-5'-exoribonuclease activity" evidence=ISO] [GO:0000738 "DNA
catabolic process, exonucleolytic" evidence=ISO] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004527 "exonuclease
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0006401 "RNA catabolic process" evidence=ISO] [GO:0008310
"single-stranded DNA specific 3'-5' exodeoxyribonuclease activity"
evidence=ISO] [GO:0009615 "response to virus" evidence=ISO]
[GO:0016605 "PML body" evidence=ISO] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 RGD:1306407
GO:GO:0016605 GO:GO:0003676 GO:GO:0009615 GO:GO:0006401
eggNOG:COG0847 HOGENOM:HOG000182422 InterPro:IPR013520
SUPFAM:SSF53098 GeneTree:ENSGT00520000055542 GO:GO:0000175
GO:GO:0000738 GO:GO:0008310 CTD:3669 HOVERGEN:HBG052149 KO:K12579
OrthoDB:EOG4M91SN EMBL:BC086557 IPI:IPI00364365
RefSeq:NP_001008510.1 UniGene:Rn.16103 SMR:Q5RJP5
Ensembl:ENSRNOT00000024826 GeneID:293052 KEGG:rno:293052
NextBio:635263 Genevestigator:Q5RJP5 Uniprot:Q5RJP5
Length = 181
Score = 191 (72.3 bits), Expect = 4.2e-15, P = 4.2e-15
Identities = 60/161 (37%), Positives = 92/161 (57%)
Query: 80 VYALDTEMV----YTVHGLEVARVTVVNVDGRLIYNTLVKPDCEIIDYNTKYSGISAKDF 135
V A+D EMV V GL AR ++VNV ++Y+ ++P+ EI DY T+ SGI+ +
Sbjct: 7 VVAMDCEMVGLGPQRVSGL--ARCSIVNVHSAVLYDKYIQPEGEITDYRTQVSGITPQHM 64
Query: 136 IR-NPYKTLKDVQNDLMGFVSKDSIIVGHGLENDLRALK--LIHSNIIDTS--VLFPHSF 190
R P+ + + +++ + K ++VGH L++D ALK + I DTS +L H
Sbjct: 65 ARATPFA---EARLEILQLL-KGKLVVGHDLKHDFSALKEDMRKYTIYDTSTDMLLWHEA 120
Query: 191 GLP-YRR-SLKSIVSQLLHQSIQSGT--HDSFEDARACIDL 227
L Y R SL+ + +LLH+SIQ+ H S EDARA ++L
Sbjct: 121 KLHCYSRVSLRLLCKRLLHKSIQNNWRGHCSVEDARATMEL 161
>UNIPROTKB|F1N5B5 [details] [associations]
symbol:REXO4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0005730 GO:GO:0003676
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 OMA:QKEVAEM EMBL:DAAA02032345
EMBL:DAAA02032346 IPI:IPI01000627 Ensembl:ENSBTAT00000026283
Uniprot:F1N5B5
Length = 402
Score = 180 (68.4 bits), Expect = 5.4e-15, Sum P(2) = 5.4e-15
Identities = 55/152 (36%), Positives = 78/152 (51%)
Query: 82 ALDTEMVYT-VHGLE--VARVTVVNVDGRLIYNTLVKPDCEIIDYNTKYSGISAKDFIRN 138
A+D EMV G E VARV++VN GR +Y+ VKP + DY T SG+ D +
Sbjct: 227 AMDCEMVGVGPEGEESVVARVSLVNQHGRCVYDKHVKPTQPVTDYRTAVSGVRPADLAQG 286
Query: 139 PYKTLKDVQNDLMGFVSKDSIIVGHGLENDLRALKLIH--SNIIDTSVLFPHSFGLPYRR 196
+ + VQ ++ + K I+VGH L NDL+AL L H I DT P + R
Sbjct: 287 --EEFEVVQREVAELL-KGRILVGHALHNDLKALFLGHPKKKIRDTQKYKPFRTQVKSGR 343
Query: 197 -SLKSIVSQLLHQSIQSGTHDSFEDARACIDL 227
SLK + ++L +Q H S +DA+ + L
Sbjct: 344 PSLKLLAERILGIQVQQAEHCSVQDAQVAMRL 375
Score = 36 (17.7 bits), Expect = 5.4e-15, Sum P(2) = 5.4e-15
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 55 GGINGPLEGYVKTKPRKSP 73
GG G G V +P K+P
Sbjct: 33 GGTPGVDPGVVAVRPPKAP 51
Score = 36 (17.7 bits), Expect = 5.4e-15, Sum P(2) = 5.4e-15
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 55 GGINGPLEGYVKTKPRKSPPP 75
G I+ P +G +K K RK+ P
Sbjct: 145 GDIS-PQQGDIKHKKRKAREP 164
>ZFIN|ZDB-GENE-120215-216 [details] [associations]
symbol:si:ch73-209e20.4 "si:ch73-209e20.4"
species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929
ZFIN:ZDB-GENE-120215-216 GO:GO:0003676 GO:GO:0005622 GO:GO:0004527
InterPro:IPR013520 SUPFAM:SSF53098 GeneTree:ENSGT00520000055542
KO:K01175 EMBL:FP243383 IPI:IPI00613534 RefSeq:XP_002665913.1
ProteinModelPortal:F1QJP9 Ensembl:ENSDART00000121769
GeneID:100333127 KEGG:dre:100333127 Bgee:F1QJP9 Uniprot:F1QJP9
Length = 418
Score = 196 (74.1 bits), Expect = 5.7e-15, P = 5.7e-15
Identities = 56/152 (36%), Positives = 84/152 (55%)
Query: 82 ALDTEMV---YTVHGLEVARVTVVNVDGRLIYNTLVKPDCEIIDYNTKYSGISAKDFIRN 138
A+D EMV Y +ARV++VN G+ IY+ VKP ++ DY T SGI D I+N
Sbjct: 235 AMDCEMVGVGYKGEDSILARVSLVNHFGKCIYDKYVKPTEKVTDYRTAVSGIRPDD-IKN 293
Query: 139 PYKTLKDVQNDLMGFVSKDSIIVGHGLENDLRALKLIHSN--IIDTSVLFPHSFGLPYRR 196
+ +K VQ ++ + K I+VGH + NDL+ L L H I DT P + R
Sbjct: 294 G-EDIKTVQKEVAQIL-KGRILVGHAIHNDLKILLLDHPKKMIRDTQRYKPFRQKVKSSR 351
Query: 197 -SLKSIVSQLLHQSIQSGTHDSFEDARACIDL 227
+L+++ Q+L+ +Q G H S +DA+A + L
Sbjct: 352 PALRNLCRQILNVQVQQGEHSSVQDAQATMRL 383
>UNIPROTKB|Q96AZ6 [details] [associations]
symbol:ISG20 "Interferon-stimulated gene 20 kDa protein"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0051607 "defense response to virus"
evidence=IEA] [GO:0008859 "exoribonuclease II activity"
evidence=IEA] [GO:0016605 "PML body" evidence=IDA] [GO:0006401 "RNA
catabolic process" evidence=IDA] [GO:0000738 "DNA catabolic
process, exonucleolytic" evidence=IDA] [GO:0000175
"3'-5'-exoribonuclease activity" evidence=IDA] [GO:0008310
"single-stranded DNA specific 3'-5' exodeoxyribonuclease activity"
evidence=IDA] [GO:0009615 "response to virus" evidence=IDA]
[GO:0008283 "cell proliferation" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0019221 "cytokine-mediated
signaling pathway" evidence=TAS] [GO:0060337 "type I
interferon-mediated signaling pathway" evidence=TAS]
InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479 Pfam:PF00929
Reactome:REACT_6900 GO:GO:0060337 GO:GO:0046872 GO:GO:0016605
GO:GO:0008283 GO:GO:0051607 GO:GO:0003723 GO:GO:0009615
GO:GO:0006401 eggNOG:COG0847 HOGENOM:HOG000182422
InterPro:IPR013520 SUPFAM:SSF53098 GO:GO:0006364 GO:GO:0000175
GO:GO:0000738 GO:GO:0008310 GO:GO:0008859 EMBL:X89773 EMBL:U88964
EMBL:BT006952 EMBL:CR456942 EMBL:BC007922 EMBL:BC016341
IPI:IPI00514614 IPI:IPI00647246 RefSeq:NP_002192.2
UniGene:Hs.459265 PDB:1WLJ PDBsum:1WLJ ProteinModelPortal:Q96AZ6
SMR:Q96AZ6 STRING:Q96AZ6 PhosphoSite:Q96AZ6 DMDM:57012967
PaxDb:Q96AZ6 PRIDE:Q96AZ6 DNASU:3669 Ensembl:ENST00000306072
Ensembl:ENST00000560741 GeneID:3669 KEGG:hsa:3669 UCSC:uc002bmv.1
CTD:3669 GeneCards:GC15P089181 HGNC:HGNC:6130 MIM:604533
neXtProt:NX_Q96AZ6 PharmGKB:PA29930 HOVERGEN:HBG052149 KO:K12579
OMA:ARCSLVD OrthoDB:EOG4M91SN PhylomeDB:Q96AZ6 ChiTaRS:ISG20
EvolutionaryTrace:Q96AZ6 GenomeRNAi:3669 NextBio:14359 Bgee:Q96AZ6
CleanEx:HS_ISG20 Genevestigator:Q96AZ6 GermOnline:ENSG00000172183
Uniprot:Q96AZ6
Length = 181
Score = 188 (71.2 bits), Expect = 8.8e-15, P = 8.8e-15
Identities = 57/159 (35%), Positives = 91/159 (57%)
Query: 80 VYALDTEMVYTVHGLE--VARVTVVNVDGRLIYNTLVKPDCEIIDYNTKYSGISAKDFI- 136
V A+D EMV E +AR ++VNV G ++Y+ ++P+ EI DY T+ SG++ + +
Sbjct: 7 VVAMDCEMVGLGPHRESGLARCSLVNVHGAVLYDKFIRPEGEITDYRTRVSGVTPQHMVG 66
Query: 137 RNPYKTLKDVQNDLMGFVSKDSIIVGHGLENDLRALKLIHSN--IIDTSV--LFPHSFGL 192
P+ + +++ + K ++VGH L++D +ALK S I DTS L L
Sbjct: 67 ATPFAVAR---LEILQLL-KGKLVVGHDLKHDFQALKEDMSGYTIYDTSTDRLLWREAKL 122
Query: 193 PY-RR-SLKSIVSQLLHQSIQSGT--HDSFEDARACIDL 227
+ RR SL+ + +LLH+SIQ+ H S EDARA ++L
Sbjct: 123 DHCRRVSLRVLSERLLHKSIQNSLLGHSSVEDARATMEL 161
>UNIPROTKB|Q66UW5 [details] [associations]
symbol:Isg20 "Interferon-stimulated gene 20 kDa protein"
species:9823 "Sus scrofa" [GO:0005634 "nucleus" evidence=IEA]
[GO:0008859 "exoribonuclease II activity" evidence=IEA] [GO:0051607
"defense response to virus" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0045087 "innate immune response"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 GO:GO:0005634
GO:GO:0046872 GO:GO:0045087 GO:GO:0051607 GO:GO:0003723
GO:GO:0090305 InterPro:IPR013520 SUPFAM:SSF53098 GO:GO:0006364
GO:GO:0008859 CTD:3669 HOVERGEN:HBG052149 KO:K12579 EMBL:AY702647
RefSeq:NP_001005351.2 UniGene:Ssc.42771 ProteinModelPortal:Q66UW5
SMR:Q66UW5 GeneID:448855 KEGG:ssc:448855 Uniprot:Q66UW5
Length = 181
Score = 187 (70.9 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 55/159 (34%), Positives = 92/159 (57%)
Query: 80 VYALDTEMVYTVHGLE--VARVTVVNVDGRLIYNTLVKPDCEIIDYNTKYSGISAKDFI- 136
V A+D EMV E +AR ++VNV G ++Y+ ++P+ EI DY T+ SG++ + +
Sbjct: 7 VVAMDCEMVGMGPRRESGLARCSLVNVHGAVLYDKFIQPEGEITDYRTRVSGVTPQHMVG 66
Query: 137 RNPYKTLKDVQNDLMGFVSKDSIIVGHGLENDLRALK--LIHSNIIDTS--VLFPHSFGL 192
P+ + +++ + K ++VGH L++D +ALK + I DTS +L L
Sbjct: 67 ATPFAVAR---LEILQLL-KGKLVVGHDLKHDFQALKEDMNRYTIYDTSTDMLLWREAKL 122
Query: 193 PY-RR-SLKSIVSQLLHQSIQSGT--HDSFEDARACIDL 227
+ RR SL+ + +LLH+SIQ+ H S EDA+A ++L
Sbjct: 123 DHCRRVSLRVLCERLLHKSIQNSLLGHSSVEDAKATMEL 161
>MGI|MGI:2140076 [details] [associations]
symbol:Isg20l2 "interferon stimulated exonuclease gene
20-like 2" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004518 "nuclease activity"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 MGI:MGI:2140076
GO:GO:0005730 GO:GO:0003676 GO:GO:0042254 GO:GO:0004527
GO:GO:0090305 eggNOG:COG0847 HOGENOM:HOG000182422
InterPro:IPR013520 SUPFAM:SSF53098 GeneTree:ENSGT00520000055542
KO:K01175 CTD:81875 HOVERGEN:HBG107986 OrthoDB:EOG4H4641
EMBL:AK053778 EMBL:AK155979 EMBL:BC098326 IPI:IPI00222565
RefSeq:NP_808331.1 UniGene:Mm.45744 ProteinModelPortal:Q3U1G5
SMR:Q3U1G5 PhosphoSite:Q3U1G5 PaxDb:Q3U1G5 PRIDE:Q3U1G5
Ensembl:ENSMUST00000055984 GeneID:229504 KEGG:mmu:229504
UCSC:uc008ptj.1 InParanoid:Q4KMV7 NextBio:379467 Bgee:Q3U1G5
CleanEx:MM_ISG20L2 Genevestigator:Q3U1G5 Uniprot:Q3U1G5
Length = 368
Score = 190 (71.9 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 58/173 (33%), Positives = 93/173 (53%)
Query: 74 PPNGYG-VYALDTEMVYT-VHGL--EVARVTVVNVDGRLIYNTLVKPDCEIIDYNTKYSG 129
P N G + A+D EMV T G +AR ++VN +G ++Y+ V P C I++Y T++SG
Sbjct: 187 PQNLPGKMVAIDCEMVGTGPKGRVSSLARCSIVNYNGDVLYDEYVLPPCYIVNYRTRWSG 246
Query: 130 ISAKDFIR-NPYKTLKDVQNDLMGFVSKDSIIVGHGLENDLRALKLIHSNII--DTS--V 184
I + P+KT + + ++ +S +++GH + ND +AL+ H + DTS
Sbjct: 247 IRKCHMVNATPFKTAR---SQILKILS-GKVVIGHAIHNDYKALQYFHPKSLTRDTSRIP 302
Query: 185 LFPHSFGLPYR--RSLKSIVSQLLHQSIQSGT--HDSFEDARACIDLILWKLL 233
L P SLK + +LL + IQ G H S EDA+A ++L +KL+
Sbjct: 303 LLNRKADCPENVTLSLKHLTKKLLSRDIQVGNTGHSSVEDAQATMEL--YKLV 353
>SGD|S000005440 [details] [associations]
symbol:REX4 "Putative RNA exonuclease possibly involved in
ribosome biogenesis" species:4932 "Saccharomyces cerevisiae"
[GO:0005622 "intracellular" evidence=IEA] [GO:0004518 "nuclease
activity" evidence=IEA] [GO:0004527 "exonuclease activity"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA;IGI]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0008408 "3'-5' exonuclease
activity" evidence=ISS] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0090305 "nucleic acid phosphodiester bond hydrolysis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000027 "ribosomal large subunit assembly" evidence=IGI]
InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479 SGD:S000005440
Pfam:PF00929 GO:GO:0005730 EMBL:BK006948 GO:GO:0003676
eggNOG:COG0847 HOGENOM:HOG000182422 InterPro:IPR013520
SUPFAM:SSF53098 GeneTree:ENSGT00520000055542 GO:GO:0008408
GO:GO:0006364 KO:K01175 GO:GO:0000027 EMBL:Z74822 OrthoDB:EOG4TB7M4
PIR:S66773 RefSeq:NP_014561.1 ProteinModelPortal:Q08237 SMR:Q08237
DIP:DIP-5458N IntAct:Q08237 MINT:MINT-543211 STRING:Q08237
PaxDb:Q08237 EnsemblFungi:YOL080C GeneID:854075 KEGG:sce:YOL080C
CYGD:YOL080c OMA:ALMLSHP NextBio:975698 Genevestigator:Q08237
GermOnline:YOL080C Uniprot:Q08237
Length = 289
Score = 185 (70.2 bits), Expect = 2.1e-14, P = 2.1e-14
Identities = 59/170 (34%), Positives = 90/170 (52%)
Query: 79 GVY-ALDTEMVYT-VHGLE--VARVTVVNVDGRLIYNTLVKPDCEIIDYNTKYSGISAKD 134
G Y A+D E V G E +AR+++VN G ++ + VKP +++++ T SGI +
Sbjct: 119 GKYIAMDCEFVGVGPEGKESALARISIVNYFGHVVLDEFVKPREKVVEWRTWVSGIKP-E 177
Query: 135 FIRNPYKTLKDVQNDLMGFVSKDSIIVGHGLENDLRALKLIH--SNIIDTSVLFPHS--F 190
++N T K+ Q + + I+VGH L++DL AL L H S + DTS P +
Sbjct: 178 HMKNAI-TFKEAQKKTADIL-EGRILVGHALKHDLEALMLSHPKSLLRDTSRHLPFRKLY 235
Query: 191 GLPYRRSLKSIVSQLLHQSIQSGTHDSFEDARACIDLILWKLLSDFRYNH 240
SLK + ++L SIQ G H S EDARA + L+ K ++F H
Sbjct: 236 AKGKTPSLKKLTREVLKISIQEGEHSSVEDARATM-LLYKKEKTEFEKIH 284
>ASPGD|ASPL0000065793 [details] [associations]
symbol:AN10955 species:162425 "Emericella nidulans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0000027 "ribosomal large subunit assembly"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479 Pfam:PF00929
GO:GO:0003676 GO:GO:0005622 EMBL:BN001304 GO:GO:0004527
HOGENOM:HOG000182422 InterPro:IPR013520 SUPFAM:SSF53098
ProteinModelPortal:C8VBH1 EnsemblFungi:CADANIAT00000588 OMA:KHMAEAR
Uniprot:C8VBH1
Length = 299
Score = 184 (69.8 bits), Expect = 3.4e-14, P = 3.4e-14
Identities = 63/188 (33%), Positives = 97/188 (51%)
Query: 65 VKTKPRKSPPPN-GYGVY-ALDTEMVYTV----HGLEVARVTVVNVDGRLIYNTLVKPDC 118
V ++ + PN G Y A+D EMV + +ARV++VN +G +Y++ V+P
Sbjct: 87 VVSRENEGRSPNVEIGKYIAMDCEMVGIGPDPDNDSALARVSIVNYNGDQVYDSYVRPKE 146
Query: 119 EIIDYNTKYSGISAKDFIRNPYKTLKDVQNDLMGFVSKDSIIVGHGLENDLRALKLIHS- 177
+ D+ T SGI K ++L+ VQ ++ + + I+VGH L NDL AL L H
Sbjct: 147 MVTDWRTHVSGILPKHMAEA--RSLEQVQKEVAEIL-EGRILVGHALRNDLDALLLSHPK 203
Query: 178 -NIIDTSVLFPH----SFGLPYRRSLKSIVSQLLHQSIQSGTHDSFEDARACIDLILWKL 232
+I DTS P+ G P LK + S+ L +IQ+G H S EDA+A + L+ +
Sbjct: 204 RDIRDTSKHPPYRKVAGGGSP---RLKILASEFLGLNIQAGAHSSMEDAKATM-LLYRRD 259
Query: 233 LSDFRYNH 240
+F H
Sbjct: 260 KDEFEREH 267
>UNIPROTKB|H3BM72 [details] [associations]
symbol:LOC81691 "Protein LOC81691" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR012337 Pfam:PF00929 GO:GO:0003676 EMBL:AC004381
InterPro:IPR013520 SUPFAM:SSF53098 Ensembl:ENST00000566276
Bgee:H3BM72 Uniprot:H3BM72
Length = 212
Score = 182 (69.1 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 44/109 (40%), Positives = 64/109 (58%)
Query: 62 EGYVKTKPRKSPPPNGYGVYALDTEMVYTVHGLEVARVTVVNVDGRLIYNTLVKPDCEII 121
E ++ TK S N ++ LD EM T G E+ R+++V G + + LVKP+ +I+
Sbjct: 107 ENFLLTKCNGSIADNS-PLFGLDCEMCLTSKGRELTRISLVAEGGCCVMDELVKPENKIL 165
Query: 122 DYNTKYSGISAKDFIRNPYKT-LKDVQNDLMGFVSKDSIIVGHGLENDL 169
DY T +SGI+ K I NP T LKDVQ L + D+++VGH L+ DL
Sbjct: 166 DYLTSFSGITKK--ILNPVTTKLKDVQRQLKALLPPDAVLVGHSLDLDL 212
>UNIPROTKB|H9KZR7 [details] [associations]
symbol:H9KZR7 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 EMBL:AADN02075373
Ensembl:ENSGALT00000017760 OMA:PTESDIW Uniprot:H9KZR7
Length = 379
Score = 186 (70.5 bits), Expect = 5.4e-14, P = 5.4e-14
Identities = 56/152 (36%), Positives = 79/152 (51%)
Query: 82 ALDTEMVYTVHGLE---VARVTVVNVDGRLIYNTLVKPDCEIIDYNTKYSGISAKDFIRN 138
A+D EMV E VARV++VN+ G+ IY+ VKP E+ DY T SGI +
Sbjct: 207 AMDCEMVGVGPSGEDSIVARVSIVNLFGKCIYDKYVKPTEEVTDYRTAVSGIRPEHLKTG 266
Query: 139 PYKTLKDVQNDLMGFVSKDSIIVGHGLENDLRALKLIH--SNIIDTSVLFPHSFGLPYRR 196
+ K VQ ++ ++ I+VGH L NDL+ L L H I DT P + R
Sbjct: 267 --EDFKTVQKEVADILN-GRILVGHALHNDLKVLFLDHPKKKIRDTQKYKPFRQRVKNAR 323
Query: 197 -SLKSIVSQLLHQSIQSGTHDSFEDARACIDL 227
SLK + +LL +Q+ H S +DA+A + L
Sbjct: 324 PSLKLLCDRLLDVQVQTSEHCSIQDAQAAMRL 355
>UNIPROTKB|F1NQP7 [details] [associations]
symbol:Gga.48606 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 OMA:QKEVAEM EMBL:AADN02026478
IPI:IPI00594596 Ensembl:ENSGALT00000005016 Uniprot:F1NQP7
Length = 414
Score = 186 (70.5 bits), Expect = 6.9e-14, P = 6.9e-14
Identities = 56/152 (36%), Positives = 79/152 (51%)
Query: 82 ALDTEMVYTVHGLE---VARVTVVNVDGRLIYNTLVKPDCEIIDYNTKYSGISAKDFIRN 138
A+D EMV E VARV++VN+ G+ IY+ VKP E+ DY T SGI +
Sbjct: 242 AMDCEMVGVGPSGEDSIVARVSIVNLFGKCIYDKYVKPTEEVTDYRTAVSGIRPEHLKTG 301
Query: 139 PYKTLKDVQNDLMGFVSKDSIIVGHGLENDLRALKLIH--SNIIDTSVLFPHSFGLPYRR 196
+ K VQ ++ ++ I+VGH L NDL+ L L H I DT P + R
Sbjct: 302 --EDFKTVQKEVADILN-GRILVGHALHNDLKVLFLDHPKKKIRDTQKYKPFRQRVKNAR 358
Query: 197 -SLKSIVSQLLHQSIQSGTHDSFEDARACIDL 227
SLK + +LL +Q+ H S +DA+A + L
Sbjct: 359 PSLKLLCDRLLDVQVQTSEHCSIQDAQAAMRL 390
>UNIPROTKB|I3LB04 [details] [associations]
symbol:ISG20 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016605 "PML body" evidence=IEA] [GO:0009615 "response
to virus" evidence=IEA] [GO:0008310 "single-stranded DNA specific
3'-5' exodeoxyribonuclease activity" evidence=IEA] [GO:0006401 "RNA
catabolic process" evidence=IEA] [GO:0000738 "DNA catabolic
process, exonucleolytic" evidence=IEA] [GO:0000175
"3'-5'-exoribonuclease activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0016605 GO:GO:0003676
GO:GO:0009615 GO:GO:0006401 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 GO:GO:0000175 GO:GO:0000738
GO:GO:0008310 OMA:ARCSLVD EMBL:FP017226 Ensembl:ENSSSCT00000024643
Uniprot:I3LB04
Length = 174
Score = 176 (67.0 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 58/164 (35%), Positives = 91/164 (55%)
Query: 77 GYGVYALDTEMV----YTVHGLEVARVTVVNVDGRLIYNTLVKPDCEIIDYNTKYSGISA 132
G V A+D EMV + GL AR ++V+ G ++Y+ ++P+ EI DY T SGI+A
Sbjct: 4 GMDVVAMDCEMVGLGPFRESGL--ARCSLVDFHGTVLYDKFIRPEGEITDYRTPVSGITA 61
Query: 133 KDFI-RNPYKTLKDVQNDLMGFVSKDSIIVGHGLENDLRALKLIHSN--IIDTSV--LFP 187
++ P+ + +++ + K ++VGH L++D +ALK SN I DT+ L
Sbjct: 62 RNMEGATPFAVAR---LEILQLL-KGKLVVGHDLKHDFKALKENMSNYTIYDTAQDRLLW 117
Query: 188 HSFGLPY-RR-SLKSIVSQLLHQSIQSGT--HDSFEDARACIDL 227
L Y RR SL+ + +LL + IQ H+S EDARA ++L
Sbjct: 118 READLHYCRRVSLRLLSQRLLGRRIQDSVLGHNSVEDARATMEL 161
>ASPGD|ASPL0000070457 [details] [associations]
symbol:AN4357 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
InterPro:IPR006055 InterPro:IPR007087 InterPro:IPR012337
InterPro:IPR015880 PROSITE:PS00028 PROSITE:PS50157 SMART:SM00355
SMART:SM00479 Pfam:PF00929 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 GO:GO:0004527 eggNOG:COG0847 InterPro:IPR013520
SUPFAM:SSF53098 EMBL:BN001303 InterPro:IPR022755 Pfam:PF12171
EMBL:AACD01000075 RefSeq:XP_661961.1 ProteinModelPortal:Q5B523
EnsemblFungi:CADANIAT00006101 GeneID:2872156 KEGG:ani:AN4357.2
OrthoDB:EOG4B5SDQ Uniprot:Q5B523
Length = 560
Score = 185 (70.2 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 54/186 (29%), Positives = 91/186 (48%)
Query: 64 YVKTKPRKSPPPNGYGVYALDTEMVYTV-----HGLEVARVTVVN-VDGRLIYNTLVKP- 116
+ +++P + N LD EMV V EV R+ V+ + G ++ NT V+P
Sbjct: 352 FAQSRPSPAKNANARQAVVLDCEMVGVVGPNNSEVSEVVRLAAVDFLSGEVLVNTFVEPA 411
Query: 117 -DCEIIDYNTKYSGISAKDFIRNPYKTLKDVQN-----DLMG-FVSKDSIIVGHGLENDL 169
D +I++ T+ SG++ K + K + VQ DL+ FV K +I++GH L NDL
Sbjct: 412 ADQRVINWRTRVSGVN-KSLLSEMKKQGQTVQGWEAARDLLWMFVDKQTILIGHSLHNDL 470
Query: 170 RALKLIHSNIIDTSVLFPHSFGLPYR--RSLKSIVSQLLHQSIQSGT-HDSFEDARACID 226
L ++H I+D+++L + ++ + IQ+G HD ED A +
Sbjct: 471 AVLGMVHQRIVDSAILTRDAVAGAKEDCARVRKLAKTFFELDIQTGKGHDCLEDTFAARE 530
Query: 227 LILWKL 232
++LW L
Sbjct: 531 VVLWCL 536
>MGI|MGI:1928895 [details] [associations]
symbol:Isg20 "interferon-stimulated protein" species:10090
"Mus musculus" [GO:0000175 "3'-5'-exoribonuclease activity"
evidence=ISO] [GO:0000738 "DNA catabolic process, exonucleolytic"
evidence=ISO] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004518 "nuclease
activity" evidence=IEA] [GO:0004527 "exonuclease activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0006401 "RNA catabolic process" evidence=ISO] [GO:0008310
"single-stranded DNA specific 3'-5' exodeoxyribonuclease activity"
evidence=ISO] [GO:0008859 "exoribonuclease II activity"
evidence=IEA] [GO:0009615 "response to virus" evidence=ISO]
[GO:0016605 "PML body" evidence=ISO] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0045087 "innate immune response"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051607 "defense response to virus" evidence=IEA]
InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479 Pfam:PF00929
MGI:MGI:1928895 GO:GO:0046872 GO:GO:0016605 GO:GO:0045087
GO:GO:0051607 GO:GO:0003723 GO:GO:0006401 eggNOG:COG0847
HOGENOM:HOG000182422 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 GO:GO:0006364 GO:GO:0000175
GO:GO:0000738 GO:GO:0008310 GO:GO:0008859 CTD:3669 KO:K12579
OrthoDB:EOG4M91SN EMBL:AF217484 EMBL:AK008139 EMBL:AK008171
EMBL:AK008353 EMBL:BC022751 IPI:IPI00123340 IPI:IPI00467269
RefSeq:NP_001106999.1 RefSeq:NP_065608.2 UniGene:Mm.322843
ProteinModelPortal:Q9JL16 SMR:Q9JL16 STRING:Q9JL16
PhosphoSite:Q9JL16 PaxDb:Q9JL16 PRIDE:Q9JL16
Ensembl:ENSMUST00000038142 Ensembl:ENSMUST00000118867
Ensembl:ENSMUST00000120331 Ensembl:ENSMUST00000121645 GeneID:57444
KEGG:mmu:57444 UCSC:uc009hxt.1 InParanoid:Q9JL16 OMA:LNFILIQ
NextBio:313851 Bgee:Q9JL16 CleanEx:MM_ISG20 Genevestigator:Q9JL16
GermOnline:ENSMUSG00000039236 Uniprot:Q9JL16
Length = 300
Score = 177 (67.4 bits), Expect = 2.3e-13, P = 2.3e-13
Identities = 50/143 (34%), Positives = 82/143 (57%)
Query: 80 VYALDTEMV----YTVHGLEVARVTVVNVDGRLIYNTLVKPDCEIIDYNTKYSGISAKDF 135
V A+D EMV V GL AR ++VN+ G ++Y+ ++P+ EI DY T+ SG++ +
Sbjct: 7 VVAMDCEMVGLGPQRVSGL--ARCSIVNIHGAVLYDKYIRPEGEITDYRTQVSGVTPQHM 64
Query: 136 IR-NPYKTLKDVQNDLMGFVSKDSIIVGHGLENDLRALK--LIHSNIIDTSV--LFPHSF 190
+R P+ + + +++ + K ++VGH L++D ALK + I DTS L H
Sbjct: 65 VRATPFG---EARLEILQLL-KGKLVVGHDLKHDFNALKEDMSKYTIYDTSTDRLLWHEA 120
Query: 191 GLPY--RRSLKSIVSQLLHQSIQ 211
L Y R SL+ + +LLH++IQ
Sbjct: 121 KLQYYSRVSLRLLCKRLLHKNIQ 143
>WB|WBGene00012465 [details] [associations]
symbol:Y17G7B.12 species:6239 "Caenorhabditis elegans"
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 eggNOG:COG0847 HOGENOM:HOG000182422
InterPro:IPR013520 SUPFAM:SSF53098 GeneTree:ENSGT00520000055542
EMBL:AL023828 PIR:T26504 RefSeq:NP_496560.1
ProteinModelPortal:Q9XXI3 SMR:Q9XXI3 STRING:Q9XXI3 PaxDb:Q9XXI3
EnsemblMetazoa:Y17G7B.12.1 EnsemblMetazoa:Y17G7B.12.2 GeneID:174842
KEGG:cel:CELE_Y17G7B.12 UCSC:Y17G7B.12 CTD:174842
WormBase:Y17G7B.12 InParanoid:Q9XXI3 OMA:TAKCTIL NextBio:885742
Uniprot:Q9XXI3
Length = 269
Score = 175 (66.7 bits), Expect = 3.9e-13, P = 3.9e-13
Identities = 52/159 (32%), Positives = 83/159 (52%)
Query: 80 VYALDTEMVYTVHG--LEV-ARVTVVNVDGRLIYNTLVKPDCEIIDYNTKYSGISAKDFI 136
V A+D E V G ++ AR+++VN G+++Y+ VKP ++ D+ T SGI ++ I
Sbjct: 102 VIAIDCEYVGAGMGGTTDILARISIVNELGKIVYDKFVKPTEKVTDFRTAVSGIRPENMI 161
Query: 137 RN-PYKTLKDVQNDLMGFVSKDSIIVGHGLENDLRALKLIHSNII--DTS---VL--FPH 188
+ P+ Q ++ + I++GH + ND R LKL H + DT+ +L +
Sbjct: 162 KAIPFDR---AQTEVSKLID-GRIVIGHAVHNDFRVLKLNHIRKLTRDTAKCTILKNMAN 217
Query: 189 SFGLPYRRSLKSIVSQLLHQSIQSGTHDSFEDARACIDL 227
G P SLK + ++L IQ G HDS DAR + L
Sbjct: 218 HHGTP---SLKKLAKEVLGIEIQRGEHDSITDARVALRL 253
>UNIPROTKB|E1BNM5 [details] [associations]
symbol:ISG20 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016605 "PML body" evidence=IEA] [GO:0009615 "response
to virus" evidence=IEA] [GO:0008310 "single-stranded DNA specific
3'-5' exodeoxyribonuclease activity" evidence=IEA] [GO:0006401 "RNA
catabolic process" evidence=IEA] [GO:0000738 "DNA catabolic
process, exonucleolytic" evidence=IEA] [GO:0000175
"3'-5'-exoribonuclease activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0016605 GO:GO:0003676
GO:GO:0009615 GO:GO:0006401 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 GO:GO:0000175 GO:GO:0000738
GO:GO:0008310 CTD:3669 KO:K12579 EMBL:DAAA02052106 IPI:IPI00695516
RefSeq:XP_002696560.1 RefSeq:XP_583075.1 UniGene:Bt.22275
ProteinModelPortal:E1BNM5 Ensembl:ENSBTAT00000019639 GeneID:506604
KEGG:bta:506604 NextBio:20867677 Uniprot:E1BNM5
Length = 171
Score = 171 (65.3 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 57/162 (35%), Positives = 93/162 (57%)
Query: 80 VYALDTEMV----YTVHGLEVARVTVVNVDGRLIYNTLVKPDCEIIDYNTKYSGISAKDF 135
V A+D EMV + GL AR ++V+ G ++Y+ ++P+ +I DY T SGI+A++
Sbjct: 7 VVAMDCEMVGLGPFRESGL--ARCSLVDYHGSVLYDKFIRPEGDITDYRTPVSGITARNM 64
Query: 136 I-RNPYKTLKDVQNDLMGFVSKDSIIVGHGLENDLRALKLIHSN--IIDTSV---LFPHS 189
P+ + +++ V K ++VGH L++D +ALK S+ I DT+ L+ +
Sbjct: 65 EGATPFAVAR---LEILQ-VLKGKLVVGHDLKHDFKALKENMSDYAIYDTAADRRLWREA 120
Query: 190 FGLPY-RR-SLKSIVSQLLHQSIQSGT--HDSFEDARACIDL 227
GL Y RR SL+ + +LL + IQ H+S EDARA ++L
Sbjct: 121 -GLQYCRRVSLRVLSQRLLGRRIQDSVLGHNSVEDARAAMEL 161
>UNIPROTKB|G3N2Q8 [details] [associations]
symbol:ISG20 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016605 "PML body" evidence=IEA] [GO:0009615 "response
to virus" evidence=IEA] [GO:0008310 "single-stranded DNA specific
3'-5' exodeoxyribonuclease activity" evidence=IEA] [GO:0006401 "RNA
catabolic process" evidence=IEA] [GO:0000738 "DNA catabolic
process, exonucleolytic" evidence=IEA] [GO:0000175
"3'-5'-exoribonuclease activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0016605 GO:GO:0003676
GO:GO:0009615 GO:GO:0006401 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 GO:GO:0000175 GO:GO:0000738
GO:GO:0008310 OMA:ARCSLVD EMBL:DAAA02052106
Ensembl:ENSBTAT00000065058 Uniprot:G3N2Q8
Length = 181
Score = 171 (65.3 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 57/162 (35%), Positives = 93/162 (57%)
Query: 80 VYALDTEMV----YTVHGLEVARVTVVNVDGRLIYNTLVKPDCEIIDYNTKYSGISAKDF 135
V A+D EMV + GL AR ++V+ G ++Y+ ++P+ +I DY T SGI+A++
Sbjct: 7 VVAMDCEMVGLGPFRESGL--ARCSLVDYHGSVLYDKFIRPEGDITDYRTPVSGITARNM 64
Query: 136 I-RNPYKTLKDVQNDLMGFVSKDSIIVGHGLENDLRALKLIHSN--IIDTSV---LFPHS 189
P+ + +++ V K ++VGH L++D +ALK S+ I DT+ L+ +
Sbjct: 65 EGATPFAVAR---LEILQ-VLKGKLVVGHDLKHDFKALKENMSDYAIYDTAADRRLWREA 120
Query: 190 FGLPY-RR-SLKSIVSQLLHQSIQSGT--HDSFEDARACIDL 227
GL Y RR SL+ + +LL + IQ H+S EDARA ++L
Sbjct: 121 -GLQYCRRVSLRVLSQRLLGRRIQDSVLGHNSVEDARAAMEL 161
>RGD|1306220 [details] [associations]
symbol:Rexo4 "REX4, RNA exonuclease 4 homolog (S. cerevisiae)"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004527 "exonuclease activity"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA;ISO]
InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479 Pfam:PF00929
RGD:1306220 GO:GO:0005730 GO:GO:0003676 GO:GO:0004527
eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 KO:K01175 CTD:57109
HOGENOM:HOG000231626 HOVERGEN:HBG000999 OrthoDB:EOG4VX263
EMBL:BC161820 IPI:IPI00563200 RefSeq:NP_001029056.1
UniGene:Rn.116879 Ensembl:ENSRNOT00000042289 GeneID:311826
KEGG:rno:311826 UCSC:RGD:1306220 NextBio:664229
Genevestigator:B1WBN4 Uniprot:B1WBN4
Length = 409
Score = 176 (67.0 bits), Expect = 8.4e-13, P = 8.4e-13
Identities = 54/154 (35%), Positives = 79/154 (51%)
Query: 82 ALDTEMVYT-VHGLE--VARVTVVNVDGRLIYNTLVKPDCEIIDYNTKYSGISAKDFIRN 138
ALD EMV G E ARV++VN G+ +Y+ VKP + DY T SGI ++ +
Sbjct: 232 ALDCEMVGVGPKGEESIAARVSIVNQYGKCVYDKYVKPTEPVTDYRTAVSGIRPENLKQG 291
Query: 139 PYKTLKDVQNDLMGFVSKDSIIVGHGLENDLRALKLIH--SNIIDTSVLFP-HSFGLPYR 195
+ + V+ ++ + K I+VGH L NDL+ L L H I DT P S R
Sbjct: 292 --EEFEVVKKEVAAML-KGRILVGHALRNDLKVLFLEHPKKKIRDTQKFKPFRSLVKSAR 348
Query: 196 RSLKSIVSQLLHQSIQSGTHDSFEDARACIDLIL 229
SLK + ++L +Q H S +DA+A + L +
Sbjct: 349 PSLKQLSEKILGLRVQQAEHCSVQDAQAAMRLYI 382
>UNIPROTKB|F1PBR5 [details] [associations]
symbol:REXO4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 GO:GO:0003676
GO:GO:0005622 GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 EMBL:AAEX03006772
Ensembl:ENSCAFT00000031428 Uniprot:F1PBR5
Length = 411
Score = 175 (66.7 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 53/154 (34%), Positives = 79/154 (51%)
Query: 82 ALDTEMVYT-VHGLE--VARVTVVNVDGRLIYNTLVKPDCEIIDYNTKYSGISAKDFIRN 138
A+D EMV G E ARV++VN G+ +Y+ VKP + DY T SGI ++ +
Sbjct: 234 AMDCEMVGAGPKGEESVAARVSIVNQYGKCVYDKYVKPTQPVTDYRTAVSGIRPENLKQG 293
Query: 139 PYKTLKDVQNDLMGFVSKDSIIVGHGLENDLRALKLIH--SNIIDTSVLFPHSFGLPYRR 196
+ + VQ ++ + K I+VGH L NDL+ L L H I DT P + R
Sbjct: 294 --EKFEVVQKEVADML-KGRILVGHALHNDLKVLFLDHPKKKIRDTQKYKPFKSQVKSGR 350
Query: 197 -SLKSIVSQLLHQSIQSGTHDSFEDARACIDLIL 229
SLK + ++L +Q H S +DA+A + L +
Sbjct: 351 PSLKLLAERILGIQVQQAEHCSIQDAQAAMRLYI 384
>UNIPROTKB|I3L751 [details] [associations]
symbol:REXO4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005730 "nucleolus" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0005730 GO:GO:0003676
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 OMA:QKEVAEM EMBL:FP565513
Ensembl:ENSSSCT00000028732 Uniprot:I3L751
Length = 421
Score = 175 (66.7 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 53/154 (34%), Positives = 80/154 (51%)
Query: 82 ALDTEMVYT-VHGLE--VARVTVVNVDGRLIYNTLVKPDCEIIDYNTKYSGISAKDFIRN 138
ALD EMV G E +ARV++VN G+ +Y+ VKP + DY T SGI ++ +
Sbjct: 244 ALDCEMVGVGPQGDESMLARVSLVNQFGKCVYDKYVKPTQPVTDYRTAVSGIRPENLAQG 303
Query: 139 PYKTLKDVQNDLMGFVSKDSIIVGHGLENDLRALKLIH--SNIIDTSVLFPHSFGLPYRR 196
+ + VQ ++ + K I+VGH L NDL+ L L H + DT P + R
Sbjct: 304 --EEFEIVQKEVAALL-KGRILVGHALHNDLKVLFLGHPKKKVRDTQKYRPFRSQVKSGR 360
Query: 197 -SLKSIVSQLLHQSIQSGTHDSFEDARACIDLIL 229
SLK + ++L +Q H S +DA+A + L +
Sbjct: 361 PSLKLLAEKILGLPVQQAEHCSVQDAQAAMRLYI 394
>UNIPROTKB|Q9GZR2 [details] [associations]
symbol:REXO4 "RNA exonuclease 4" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=NAS]
[GO:0005634 "nucleus" evidence=NAS] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=NAS]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 GO:GO:0005730
EMBL:CH471090 GO:GO:0003700 GO:GO:0003676 GO:GO:0004527
GO:GO:0090305 eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098
EMBL:AL158826 KO:K01175 EMBL:AF295774 EMBL:AF273304 EMBL:AL136894
EMBL:AK025493 EMBL:AK314333 EMBL:BC009274 IPI:IPI00010653
IPI:IPI00513877 RefSeq:NP_065118.2 UniGene:Hs.438409
ProteinModelPortal:Q9GZR2 SMR:Q9GZR2 IntAct:Q9GZR2 STRING:Q9GZR2
PhosphoSite:Q9GZR2 DMDM:71153418 SWISS-2DPAGE:Q9GZR2 PaxDb:Q9GZR2
PRIDE:Q9GZR2 DNASU:57109 Ensembl:ENST00000371935
Ensembl:ENST00000371942 Ensembl:ENST00000445916
Ensembl:ENST00000453165 Ensembl:ENST00000454825
Ensembl:ENST00000562216 Ensembl:ENST00000568937
Ensembl:ENST00000569763 Ensembl:ENST00000570226 GeneID:57109
KEGG:hsa:57109 UCSC:uc004cdm.3 CTD:57109 GeneCards:GC09M136271
HGNC:HGNC:12820 HPA:HPA047006 MIM:602930 neXtProt:NX_Q9GZR2
PharmGKB:PA37414 HOGENOM:HOG000231626 HOVERGEN:HBG000999
InParanoid:Q9GZR2 OMA:QKEVAEM OrthoDB:EOG4VX263 PhylomeDB:Q9GZR2
GenomeRNAi:57109 NextBio:62959 ArrayExpress:Q9GZR2 Bgee:Q9GZR2
CleanEx:HS_REXO4 Genevestigator:Q9GZR2 GermOnline:ENSG00000148300
Uniprot:Q9GZR2
Length = 422
Score = 175 (66.7 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 60/176 (34%), Positives = 85/176 (48%)
Query: 59 GPLEGYVKTKPRKSPPPNGYG-VYALDTEMVYT-VHGLE--VARVTVVNVDGRLIYNTLV 114
G EG V K G ALD EMV G E ARV++VN G+ +Y+ V
Sbjct: 221 GQSEGSVSLSLVKEQAFGGLTRALALDCEMVGVGPKGEESMAARVSIVNQYGKCVYDKYV 280
Query: 115 KPDCEIIDYNTKYSGISAKDFIRNPYKTLKDVQNDLMGFVSKDSIIVGHGLENDLRALKL 174
KP + DY T SGI ++ + + L+ VQ ++ + K I+VGH L NDL+ L L
Sbjct: 281 KPTEPVTDYRTAVSGIRPENLKQG--EELEVVQKEVAEML-KGRILVGHALHNDLKVLFL 337
Query: 175 IH--SNIIDTSVLFPHSFGLPYRR-SLKSIVSQLLHQSIQSGTHDSFEDARACIDL 227
H I DT P + R SL+ + ++L +Q H S +DA+A + L
Sbjct: 338 DHPKKKIRDTQKYKPFKSQVKSGRPSLRLLSEKILGLQVQQAEHCSIQDAQAAMRL 393
>UNIPROTKB|E2R2F5 [details] [associations]
symbol:ISG20 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016605 "PML body" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0008310 "single-stranded DNA
specific 3'-5' exodeoxyribonuclease activity" evidence=IEA]
[GO:0006401 "RNA catabolic process" evidence=IEA] [GO:0000738 "DNA
catabolic process, exonucleolytic" evidence=IEA] [GO:0000175
"3'-5'-exoribonuclease activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0016605 GO:GO:0003676
GO:GO:0009615 GO:GO:0006401 InterPro:IPR013520 SUPFAM:SSF53098
GO:GO:0000175 GO:GO:0000738 GO:GO:0008310
Ensembl:ENSCAFT00000018291 Uniprot:E2R2F5
Length = 183
Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 55/164 (33%), Positives = 90/164 (54%)
Query: 76 NGYGVYALDTEMVYTVHGLE--VARVTVVNVDGRLIYNTLVKPDCEIIDYNTKYSGISAK 133
+G V A+D EMV + +AR ++V++ G ++Y+ ++P+ EI DY T+ SGI+ +
Sbjct: 3 SGTDVVAIDCEMVGVGPSRKSGLARCSLVDLHGTVLYDKFIRPEGEITDYRTQVSGITPR 62
Query: 134 DFIR-NPYKTLK-DVQNDLMGFVSKDSIIVGHGLENDLRALKLIHSN--IIDTSV--LFP 187
+ P+ + ++ L G ++VGH L++D +ALK SN I DTS L
Sbjct: 63 HMEQATPFAVARLEILQLLEG-----KLVVGHDLKHDFQALKENMSNYAIYDTSTDRLLW 117
Query: 188 HSFGLPY-RR-SLKSIVSQLLHQSIQSGT--HDSFEDARACIDL 227
L RR SL+ + +LL + IQ+ H S EDA+A ++L
Sbjct: 118 REANLQNCRRVSLRVLSERLLGRRIQNSRFGHSSVEDAKAAMEL 161
>UNIPROTKB|F6X5D6 [details] [associations]
symbol:ISG20 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 GO:GO:0003676
GO:GO:0005622 GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 CTD:3669 KO:K12579 OMA:ARCSLVD
Ensembl:ENSCAFT00000018291 EMBL:AAEX03002317 RefSeq:XP_545847.2
GeneID:488729 KEGG:cfa:488729 Uniprot:F6X5D6
Length = 171
Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 55/164 (33%), Positives = 90/164 (54%)
Query: 76 NGYGVYALDTEMVYTVHGLE--VARVTVVNVDGRLIYNTLVKPDCEIIDYNTKYSGISAK 133
+G V A+D EMV + +AR ++V++ G ++Y+ ++P+ EI DY T+ SGI+ +
Sbjct: 3 SGTDVVAIDCEMVGVGPSRKSGLARCSLVDLHGTVLYDKFIRPEGEITDYRTQVSGITPR 62
Query: 134 DFIR-NPYKTLK-DVQNDLMGFVSKDSIIVGHGLENDLRALKLIHSN--IIDTSV--LFP 187
+ P+ + ++ L G ++VGH L++D +ALK SN I DTS L
Sbjct: 63 HMEQATPFAVARLEILQLLEG-----KLVVGHDLKHDFQALKENMSNYAIYDTSTDRLLW 117
Query: 188 HSFGLPY-RR-SLKSIVSQLLHQSIQSGT--HDSFEDARACIDL 227
L RR SL+ + +LL + IQ+ H S EDA+A ++L
Sbjct: 118 REANLQNCRRVSLRVLSERLLGRRIQNSRFGHSSVEDAKAAMEL 161
>DICTYBASE|DDB_G0281327 [details] [associations]
symbol:rexo4 "RNA exonuclease 4" species:44689
"Dictyostelium discoideum" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0090305 "nucleic acid phosphodiester bond
hydrolysis" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004518
"nuclease activity" evidence=IEA] InterPro:IPR012337
dictyBase:DDB_G0281327 Pfam:PF00929 GO:GO:0005634
GenomeReviews:CM000152_GR EMBL:AAFI02000040 GO:GO:0003676
GO:GO:0090305 eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098
GO:GO:0004518 RefSeq:XP_640882.1 ProteinModelPortal:Q54U94
STRING:Q54U94 EnsemblProtists:DDB0305008 GeneID:8622938
KEGG:ddi:DDB_G0281327 OMA:NDIPESQ Uniprot:Q54U94
Length = 298
Score = 168 (64.2 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 60/232 (25%), Positives = 112/232 (48%)
Query: 5 RRSDEKRLKAKSLTSMSVWERKSLFRKLPPRTGFNPVCTSGLRISALDHVGGINGPLEGY 64
++ E +LK KS T + K + K P FN +C IS +D + P +
Sbjct: 60 QKKKEAKLKLKSATPYT--STKVIEEKKPHIKDFNQLCQEHNIISPIDD--NLVSPTQKE 115
Query: 65 VKTKPRKSPPPNGYGVYALDTEMVYTVHGLE--VARVTVVNVDGRLIYNTLVKPDCEIID 122
+ S +++D +++ + G + + +V + N +G++IY +VKP +I+D
Sbjct: 116 IDNLNESSK------FFSIDCKII-EIEGNKGTLGKVCIANQNGQIIYEKIVKPMDKIVD 168
Query: 123 YNTKYSGISAKDFIRNPYKTLKDVQNDLMGFVSKDSIIVGHGLENDLRALKLIHSN-IID 181
+ TK++G++ +D ++ VQ ++ + + I+VGH L +DL+ LKL H ++
Sbjct: 169 FRTKFTGLT-RDKVQREGTDFLQVQKEVEKIL-RHKILVGHDLVHDLKNLKLAHKKKLLR 226
Query: 182 TSVLFPHSFGLPYRR--SLKSIVSQLLHQSIQSGTHDSFEDARACIDLILWK 231
+ F F SLKSI + L+ S + + D I++IL+K
Sbjct: 227 DATQFTKFFNPDTNSEDSLKSIAKRELNFSPDNWDPNGKRDT--IINVILYK 276
>MGI|MGI:2684957 [details] [associations]
symbol:Rexo4 "REX4, RNA exonuclease 4 homolog (S.
cerevisiae)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004518 "nuclease activity"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 MGI:MGI:2684957
GO:GO:0005730 GO:GO:0003676 GO:GO:0004527 GO:GO:0090305
eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 KO:K01175 CTD:57109
HOGENOM:HOG000231626 HOVERGEN:HBG000999 EMBL:AK079733 EMBL:AK138894
EMBL:BC060147 IPI:IPI00407108 RefSeq:NP_997117.2 UniGene:Mm.291874
ProteinModelPortal:Q6PAQ4 SMR:Q6PAQ4 PhosphoSite:Q6PAQ4
PaxDb:Q6PAQ4 PRIDE:Q6PAQ4 DNASU:227656 Ensembl:ENSMUST00000114020
GeneID:227656 KEGG:mmu:227656 UCSC:uc008iwn.1 InParanoid:Q6PAQ4
OMA:EWESIAR ChiTaRS:REXO4 NextBio:378724 Bgee:Q6PAQ4
CleanEx:MM_REXO4 Genevestigator:Q6PAQ4
GermOnline:ENSMUSG00000052406 Uniprot:Q6PAQ4
Length = 432
Score = 168 (64.2 bits), Expect = 8.5e-11, P = 8.5e-11
Identities = 53/153 (34%), Positives = 78/153 (50%)
Query: 82 ALDTEMVYT-VHGLE--VARVTVVNVDGRLIYNTLVKPDCEIIDYNTKYSGISAKDFIRN 138
ALD EMV G E ARV++VN G+ +Y+ VKP + DY T SGI ++ +
Sbjct: 255 ALDCEMVGVGPKGEESIAARVSIVNQYGKCVYDKYVKPTEPVTDYRTAVSGIRPENLKQG 314
Query: 139 P-YKTLKDVQNDLMGFVSKDSIIVGHGLENDLRALKLIH--SNIIDTSVLFPHSFGLPYR 195
++ +K +++ K I+VGH L NDL+ L L H I DT P +
Sbjct: 315 EEFEVVKKEVAEML----KGRILVGHALHNDLKVLFLDHPKKKIRDTQKFKPFRSRVKSG 370
Query: 196 R-SLKSIVSQLLHQSIQSGTHDSFEDARACIDL 227
R SLK + ++L +Q H S +DA+A + L
Sbjct: 371 RPSLKRLSEKILGIRVQQAEHCSIQDAQAAMRL 403
>CGD|CAL0003518 [details] [associations]
symbol:orf19.5220 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0000027 "ribosomal large subunit
assembly" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479 CGD:CAL0003518
Pfam:PF00929 GO:GO:0005634 GO:GO:0003676 GO:GO:0004527
GO:GO:0090305 eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098
GO:GO:0006364 KO:K01175 EMBL:AACQ01000070 EMBL:AACQ01000071
RefSeq:XP_716289.1 RefSeq:XP_716353.1 ProteinModelPortal:Q5A3Q0
STRING:Q5A3Q0 GeneID:3641941 GeneID:3642012 KEGG:cal:CaO19.12687
KEGG:cal:CaO19.5220 Uniprot:Q5A3Q0
Length = 285
Score = 156 (60.0 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 51/161 (31%), Positives = 82/161 (50%)
Query: 79 GVY-ALDTEMV-YTVHGLE--VARVTVVNVDGRLIYNTLVKPDCEIIDYNTKYSGISAKD 134
G Y A+D E V G E +AR++++N G ++ +T V+P + D+ T SGI +
Sbjct: 114 GKYVAIDCEFVGIGKDGEESALARISIINYYGVVLLDTYVRPQERVTDWRTWVSGIQS-- 171
Query: 135 FIRNPYKTLKDVQNDLMGFVSKDSIIVGHGLENDLRALKLIH-SNIIDTSVLFPHSFGLP 193
+ K Q M ++ + I+VGH + NDL L L H ++I + FP +
Sbjct: 172 YHMQDAIDFKTAQLKTMELIN-NKILVGHAVNNDLDILFLSHPKSMIRDTCKFPKFREIA 230
Query: 194 YRRS--LKSIVSQLLHQSIQSGTHDSFEDARACIDLILWKL 232
+S LK ++ + IQ G H S EDARA ++L++L
Sbjct: 231 GGKSPSLKKLIKHFIQVDIQIGQHSSVEDARAT--MLLFRL 269
>FB|FBgn0033352 [details] [associations]
symbol:CG8232 species:7227 "Drosophila melanogaster"
[GO:0004535 "poly(A)-specific ribonuclease activity" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0000289
"nuclear-transcribed mRNA poly(A) tail shortening" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001394 InterPro:IPR006055 InterPro:IPR012337
InterPro:IPR015943 PROSITE:PS50235 SMART:SM00479 Pfam:PF00929
EMBL:AE013599 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0003676
GO:GO:0005622 GO:GO:0006511 eggNOG:COG0847 InterPro:IPR013520
SUPFAM:SSF53098 GO:GO:0004221 GO:GO:0004535 GO:GO:0000289 KO:K12571
OMA:TQLHQDM GeneTree:ENSGT00390000013978 EMBL:BT031142
RefSeq:NP_610427.2 UniGene:Dm.11534 SMR:A1Z7K9 IntAct:A1Z7K9
STRING:A1Z7K9 EnsemblMetazoa:FBtr0088654 GeneID:35893
KEGG:dme:Dmel_CG8232 UCSC:CG8232-RA FlyBase:FBgn0033352
InParanoid:A1Z7K9 KO:K01072 OrthoDB:EOG4HT771 ChiTaRS:CG8232
GenomeRNAi:35893 NextBio:795685 Uniprot:A1Z7K9
Length = 1241
Score = 161 (61.7 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 50/155 (32%), Positives = 72/155 (46%)
Query: 85 TEMVYTVHGLEVARVTVVN----VDGRLIYNTLVKPDCEIIDYNTKYSGISAKD----FI 136
T + H + VAR++ + +G + + +++DY T++SGI D F
Sbjct: 1058 TATIKPCH-MSVARISCIRGQGPAEGVPFMDDYISTQEKVVDYLTQFSGIKPGDLDANFS 1116
Query: 137 RNPYKTLKDVQNDLMGFVSKDSIIVGHGLENDLRALKLI--HSNIIDTSVLFPHSFGLPY 194
+ LK L V I VGHGL+ND R + + IIDT H F +P+
Sbjct: 1117 KKRLTALKYSYQKLKYLVDVGVIFVGHGLKNDFRVINIYVPSEQIIDTV----HLFHMPH 1172
Query: 195 RR--SLKSIVSQLLHQSIQSGTHDSFEDARACIDL 227
R SL+ + L IQS THDS EDAR + L
Sbjct: 1173 HRMVSLRFLAWHFLGTKIQSETHDSIEDARTTLQL 1207
Score = 40 (19.1 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 15/74 (20%), Positives = 26/74 (35%)
Query: 34 PRTGFNPVCTSGLRISALDHVGGIN----GPLEGYVKTKPRKSPPPNGYGVYALDTEMVY 89
PR + T+G + + D G G++ P + +Y+ TE
Sbjct: 308 PRVSMYQINTNGSQCLSFDISSSSQAMAFGDQSGHINMIAAVQTPQPQFNLYSRSTEFAD 367
Query: 90 TVHGLEVARVTVVN 103
V L + +T N
Sbjct: 368 VVPQLPMVSITDTN 381
>CGD|CAL0004517 [details] [associations]
symbol:orf19.4764 species:5476 "Candida albicans" [GO:0031251
"PAN complex" evidence=IEA] [GO:0031124 "mRNA 3'-end processing"
evidence=IEA] [GO:0006301 "postreplication repair" evidence=IEA]
[GO:0004535 "poly(A)-specific ribonuclease activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001394 InterPro:IPR006055
InterPro:IPR012337 InterPro:IPR015943 PROSITE:PS50082
PROSITE:PS50235 PROSITE:PS50294 SMART:SM00479 CGD:CAL0004517
Pfam:PF00929 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0006397 GO:GO:0003676 GO:GO:0090305
GO:GO:0006511 eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098
EMBL:AACQ01000001 EMBL:AACQ01000002 GO:GO:0004221 GO:GO:0004535
RefSeq:XP_723261.1 RefSeq:XP_723450.1 ProteinModelPortal:Q5APK0
STRING:Q5APK0 GeneID:3634773 GeneID:3635119 KEGG:cal:CaO19.12228
KEGG:cal:CaO19.4764 KO:K12571 Uniprot:Q5APK0
Length = 1190
Score = 163 (62.4 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 50/153 (32%), Positives = 74/153 (48%)
Query: 94 LEVARVTVVNVDGRLIYNTLVKPDCEIIDYNTKYSGISAKDFI-----RNPYKTLKDVQN 148
L +AR++V+ +G + + +I DY T +SGI D R TL+
Sbjct: 1018 LSLARISVLRENGIPFIDDYIVHTSDIYDYLTNFSGIEPNDLNLTLSNRENLVTLQTAYR 1077
Query: 149 DLMGFVSKDSIIVGHGLENDLRALKLI--HSNIIDTSVLFPHSFGLPYRRSLKSIVSQLL 206
L ++ I VGHGL ND R + L I DT+V++ S + SLK + +L
Sbjct: 1078 KLWLLLNLGVIFVGHGLYNDFRTINLQVPERQIRDTAVIYYKS-DFKRQLSLKFLAYVML 1136
Query: 207 HQSIQSGTHDSFEDARACIDLILWKLLSDFRYN 239
+ +QSG HDS EDA L+L+K + YN
Sbjct: 1137 KEKVQSGNHDSIEDANTA--LLLYKKYQNL-YN 1166
Score = 36 (17.7 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 6/11 (54%), Positives = 9/11 (81%)
Query: 48 ISALDHVGGIN 58
+S+ DH GGI+
Sbjct: 166 LSSFDHQGGIS 176
>TAIR|locus:2083153 [details] [associations]
symbol:AT3G50090 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479
Pfam:PF00929 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0003676 GO:GO:0004527 GO:GO:0090305 eggNOG:COG0847
InterPro:IPR013520 SUPFAM:SSF53098 EMBL:AL132978 KO:K14570
HOGENOM:HOG000083886 IPI:IPI00524773 PIR:T45862 RefSeq:NP_190578.1
UniGene:At.53865 ProteinModelPortal:Q9SN09 SMR:Q9SN09
EnsemblPlants:AT3G50090.1 GeneID:824171 KEGG:ath:AT3G50090
TAIR:At3g50090 InParanoid:Q9SN09 OMA:FLHRIPH PhylomeDB:Q9SN09
ProtClustDB:CLSN2914751 Genevestigator:Q9SN09 Uniprot:Q9SN09
Length = 322
Score = 152 (58.6 bits), Expect = 6.6e-09, P = 6.6e-09
Identities = 47/152 (30%), Positives = 77/152 (50%)
Query: 82 ALDTEMVYTVHGLE-VARVTVVNVDGRLIYNTLVKPDCEIIDYNTKYSGISAKDFIRNPY 140
ALD EMV G E V RV V+ + ++I + VKP ++DY T +G++A+D ++
Sbjct: 77 ALDCEMVLCEDGTEGVVRVGAVDRNLKVILDEFVKPHKPVVDYRTAITGVTAED-VQKAT 135
Query: 141 KTLKDVQNDLMGFVSKDSIIVGHGLENDLRALKLIHSNIIDTSVLFPHSFGLPYRR-SLK 199
+L D+Q L F+S +I++ H + +IDTS++F + RR SL
Sbjct: 136 LSLVDIQEKLRPFLSAGAILIDHPI-------------VIDTSLVFKYPNSRKLRRPSLN 182
Query: 200 SIVSQLLHQSIQSG--THDSFEDARACIDLIL 229
++ +L +Q +H DA A + L L
Sbjct: 183 TLCMSVLGYEVQKAGVSHHCVHDAAAAMKLAL 214
>UNIPROTKB|E2R7T9 [details] [associations]
symbol:REXO4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 GO:GO:0003676
GO:GO:0005622 GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 OMA:QKEVAEM EMBL:AAEX03006772
Ensembl:ENSCAFT00000035775 Uniprot:E2R7T9
Length = 447
Score = 154 (59.3 bits), Expect = 7.8e-09, P = 7.8e-09
Identities = 49/142 (34%), Positives = 71/142 (50%)
Query: 82 ALDTEMVYT-VHGLE--VARVTVVNVDGRLIYNTLVKPDCEIIDYNTKYSGISAKDFIRN 138
A+D EMV G E ARV++VN G+ +Y+ VKP + DY T SGI ++ +
Sbjct: 247 AMDCEMVGAGPKGEESVAARVSIVNQYGKCVYDKYVKPTQPVTDYRTAVSGIRPENLKQG 306
Query: 139 PYKTLKDVQNDLMGFVSKDSIIVGHGLENDLRALKLIH--SNIIDTSVLFPHSFGLPYRR 196
+ + VQ ++ + K I+VGH L NDL+ L L H I DT P + R
Sbjct: 307 --EKFEVVQKEVADML-KGRILVGHALHNDLKVLFLDHPKKKIRDTQKYKPFKSQVKSGR 363
Query: 197 -SLKSIVSQLLHQSIQSGTHDS 217
SLK + ++L +Q H S
Sbjct: 364 PSLKLLAERILGIQVQQAEHCS 385
>POMBASE|SPAC22G7.04 [details] [associations]
symbol:ubp13 "ubiquitin C-terminal hydrolase,
poly(A)-specific ribonuclease complex subunit Pan2 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] [GO:0004535 "poly(A)-specific
ribonuclease activity" evidence=ISO] [GO:0004843
"ubiquitin-specific protease activity" evidence=ISM] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0006301 "postreplication repair"
evidence=ISO] [GO:0006397 "mRNA processing" evidence=ISO]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031251 "PAN complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001394 InterPro:IPR001680
InterPro:IPR006055 InterPro:IPR012337 InterPro:IPR015943
PROSITE:PS50082 PROSITE:PS50235 PROSITE:PS50294 SMART:SM00320
SMART:SM00479 PomBase:SPAC22G7.04 Pfam:PF00929 EMBL:CU329670
GenomeReviews:CU329670_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0006397 GO:GO:0003676 GO:GO:0006511
eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098 GO:GO:0004843
GO:GO:0004221 GO:GO:0006301 GO:GO:0004535 HOGENOM:HOG000230585
OrthoDB:EOG44F9J8 MEROPS:C19.978 PIR:T11614 RefSeq:NP_593053.2
STRING:Q09798 EnsemblFungi:SPAC22G7.04.1 GeneID:2541684
NextBio:20802777 GO:GO:0031251 Uniprot:Q09798
Length = 1088
Score = 157 (60.3 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 52/144 (36%), Positives = 72/144 (50%)
Query: 94 LEVARVTVVNVDGR---LIY-NTLVKPDCEIIDYNTKYSGISAKDFI--RNPYKT--LKD 145
L +ARV+V+ +G L + + V D ++ DY T+YSGI D R+PY LK
Sbjct: 890 LSLARVSVLRGEGPNKGLPFIDDYVATDDKVTDYLTEYSGIHPGDLDPDRSPYNVVPLKV 949
Query: 146 VQNDLMGFVSKDSIIVGHGLENDLRALKLI--HSNIIDTSVLFPHSFGLPYRRSLKSIVS 203
L V+ I VGHGL+ D R + L+ ++DT LF S + SLK +
Sbjct: 950 AYKKLRLLVNAGCIFVGHGLQKDFRIINLLVPPEQVVDTVDLFFLS-SRQRKLSLKFLAW 1008
Query: 204 QLLHQSIQSGTHDSFEDARACIDL 227
LL + IQ HDS EDA + L
Sbjct: 1009 YLLDEEIQLTEHDSIEDALTALKL 1032
>ZFIN|ZDB-GENE-030131-3113 [details] [associations]
symbol:pan2 "PAN2 poly(A) specific ribonuclease
subunit homolog (S. cerevisiae)" species:7955 "Danio rerio"
[GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR017986 InterPro:IPR001394
InterPro:IPR006055 InterPro:IPR012337 InterPro:IPR015943
PROSITE:PS50235 SMART:SM00479 Pfam:PF00929
ZFIN:ZDB-GENE-030131-3113 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0003676 GO:GO:0005622 GO:GO:0004527 GO:GO:0006511
InterPro:IPR013520 SUPFAM:SSF53098 GO:GO:0004221 EMBL:BX927210
GeneTree:ENSGT00390000013978 IPI:IPI00899532
Ensembl:ENSDART00000111836 ArrayExpress:E7FG33 Bgee:E7FG33
Uniprot:E7FG33
Length = 1215
Score = 157 (60.3 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 49/146 (33%), Positives = 71/146 (48%)
Query: 94 LEVARVTVVNVDGRL----IYNTLVKPDCEIIDYNTKYSGISAKDF---IRNPY-KTLKD 145
+ VAR+T V G+ + + +++DY T+YSGI D I + + TLK
Sbjct: 1016 MSVARITCVRGQGQNEGVPFIDDYISTQEQVVDYLTQYSGIKPGDLDAKISSKHLTTLKS 1075
Query: 146 VQNDLMGFVSKDSIIVGHGLENDLRALKLI--HSNIIDTSVLFPHSFGLPYRR--SLKSI 201
L + VGHGL+ D R + L+ +IDT LF H +P +R SL+ +
Sbjct: 1076 TYLKLRFLIDTGVRFVGHGLQKDFRVINLMVPKDQVIDTVYLF-H---MPRKRMISLRFL 1131
Query: 202 VSQLLHQSIQSGTHDSFEDARACIDL 227
L +IQ THDS EDAR + L
Sbjct: 1132 AWYFLDLNIQGETHDSIEDARTALQL 1157
>UNIPROTKB|Q5F450 [details] [associations]
symbol:PAN2 "PAB-dependent poly(A)-specific ribonuclease
subunit 2" species:9031 "Gallus gallus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0000184 "nuclear-transcribed
mRNA catabolic process, nonsense-mediated decay" evidence=IEA]
[GO:0004535 "poly(A)-specific ribonuclease activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001394
InterPro:IPR006055 InterPro:IPR012337 InterPro:IPR015943
PROSITE:PS50235 SMART:SM00479 Pfam:PF00929 GO:GO:0005634
GO:GO:0005737 GO:GO:0000184 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0003676 GO:GO:0090305 GO:GO:0006511 eggNOG:COG0847
InterPro:IPR013520 SUPFAM:SSF53098 GO:GO:0004221 GO:GO:0004535
KO:K12571 EMBL:AJ851450 IPI:IPI00579039 RefSeq:NP_001012972.1
UniGene:Gga.18769 ProteinModelPortal:Q5F450 STRING:Q5F450
GeneID:429172 KEGG:gga:429172 CTD:9924 HOGENOM:HOG000230585
HOVERGEN:HBG089847 InParanoid:Q5F450 OrthoDB:EOG4HQDHH
NextBio:20829982 Uniprot:Q5F450
Length = 1197
Score = 153 (58.9 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 49/146 (33%), Positives = 70/146 (47%)
Query: 94 LEVARVTVVNV----DGRLIYNTLVKPDCEIIDYNTKYSGISAKDF---IRNPY-KTLKD 145
+ VAR+T V +G + + +++DY T+YSGI D I + + TLK
Sbjct: 1000 MSVARITCVRGQGPNEGVPFIDDYISTQEQVVDYLTQYSGIKPGDLDAKISSKHLTTLKS 1059
Query: 146 VQNDLMGFVSKDSIIVGHGLENDLRALKLI--HSNIIDTSVLFPHSFGLPYRR--SLKSI 201
L + VGHGL+ D R + L+ +IDT LF H +P +R SL+ +
Sbjct: 1060 TYLKLRFLIDVGVKFVGHGLQKDFRVINLMVPKDQVIDTVYLF-H---IPRKRMISLRFL 1115
Query: 202 VSQLLHQSIQSGTHDSFEDARACIDL 227
L IQ THDS EDAR + L
Sbjct: 1116 AWYFLDLKIQGETHDSIEDARTALQL 1141
>WB|WBGene00017951 [details] [associations]
symbol:panl-2 species:6239 "Caenorhabditis elegans"
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006055 InterPro:IPR012337 InterPro:IPR015943
SMART:SM00320 SMART:SM00479 Pfam:PF00929 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0003676 GO:GO:0005622 GO:GO:0004527
eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098 EMBL:FO080392
KO:K12571 GeneTree:ENSGT00390000013978 PIR:T16217
RefSeq:NP_498519.1 ProteinModelPortal:P53015 SMR:P53015
STRING:P53015 PaxDb:P53015 EnsemblMetazoa:F31E3.4 GeneID:175974
KEGG:cel:CELE_F31E3.4 UCSC:F31E3.4 CTD:175974 WormBase:F31E3.4
HOGENOM:HOG000020895 InParanoid:P53015 OMA:CITCELH NextBio:890566
Uniprot:P53015
Length = 1131
Score = 152 (58.6 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 50/147 (34%), Positives = 70/147 (47%)
Query: 90 TVHGLEVARVTVVNVDG-RLIYNTLVK--PDCEIIDYNTKYSGISAKDFI---RNPYKTL 143
TV V R + V+ G R+I++ VK D E++DY TK+SGI D Y T
Sbjct: 929 TVQMRAVGRASCVDSTGERIIFDDHVKLTDDVEVVDYLTKFSGIVKADLCPTTSEKYLTT 988
Query: 144 -KDVQNDLMGFVSKDSIIVGHGLENDLRALKL--IHSNIIDTSVLFPHSFGLPYRRSLKS 200
K + + + + VGH L ND L + S IIDT L G SL+
Sbjct: 989 HKRLLLRMHVLIQRGVTFVGHALHNDFTVLNVHVAESQIIDTVTLM--RLGTQRMLSLQF 1046
Query: 201 IVSQLLHQSIQSGTHDSFEDARACIDL 227
+V ++L ++IQ HDS DAR + L
Sbjct: 1047 LVKEILGETIQMEAHDSVVDARYALKL 1073
>UNIPROTKB|E1BML0 [details] [associations]
symbol:PAN2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0004527 "exonuclease activity"
evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001394 InterPro:IPR006055
InterPro:IPR012337 InterPro:IPR015943 PROSITE:PS50235 SMART:SM00479
Pfam:PF00929 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0003676
GO:GO:0005622 GO:GO:0004527 GO:GO:0006511 InterPro:IPR013520
SUPFAM:SSF53098 GO:GO:0004221 KO:K12571 CTD:9924 OMA:TQLHQDM
GeneTree:ENSGT00390000013978 EMBL:DAAA02013529 IPI:IPI00924297
RefSeq:NP_001073078.2 UniGene:Bt.87426 Ensembl:ENSBTAT00000061314
GeneID:538820 KEGG:bta:538820 NextBio:20877604 ArrayExpress:E1BML0
Uniprot:E1BML0
Length = 1198
Score = 150 (57.9 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 48/146 (32%), Positives = 70/146 (47%)
Query: 94 LEVARVTVVNV----DGRLIYNTLVKPDCEIIDYNTKYSGISAKDF---IRNPY-KTLKD 145
+ VAR+T V +G + + +++DY T+YSGI D I + + TLK
Sbjct: 1001 MSVARITCVRGQGPNEGIPFIDDYISTQEQVVDYLTQYSGIKPGDLDAKISSKHLTTLKS 1060
Query: 146 VQNDLMGFVSKDSIIVGHGLENDLRALKLI--HSNIIDTSVLFPHSFGLPYRR--SLKSI 201
L + VGHGL+ D R + L+ ++DT LF H +P +R SL+ +
Sbjct: 1061 TYLKLRFLIDIGVKFVGHGLQKDFRVINLMVPKDQVLDTVYLF-H---MPRKRMISLRFL 1116
Query: 202 VSQLLHQSIQSGTHDSFEDARACIDL 227
L IQ THDS EDAR + L
Sbjct: 1117 AWYFLDLKIQGETHDSIEDARTALQL 1142
>UNIPROTKB|F1PV84 [details] [associations]
symbol:PAN2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
[GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001394 InterPro:IPR006055 InterPro:IPR012337
InterPro:IPR015943 PROSITE:PS50235 SMART:SM00479 Pfam:PF00929
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 GO:GO:0006511 InterPro:IPR013520 SUPFAM:SSF53098
GO:GO:0004221 OMA:TQLHQDM GeneTree:ENSGT00390000013978
EMBL:AAEX03006926 Ensembl:ENSCAFT00000000197 Uniprot:F1PV84
Length = 1198
Score = 150 (57.9 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 48/146 (32%), Positives = 70/146 (47%)
Query: 94 LEVARVTVVNV----DGRLIYNTLVKPDCEIIDYNTKYSGISAKDF---IRNPY-KTLKD 145
+ VAR+T V +G + + +++DY T+YSGI D I + + TLK
Sbjct: 1001 MSVARITCVRGQGPNEGIPFIDDYISTQEQVVDYLTQYSGIKPGDLDAKISSKHLTTLKS 1060
Query: 146 VQNDLMGFVSKDSIIVGHGLENDLRALKLI--HSNIIDTSVLFPHSFGLPYRR--SLKSI 201
L + VGHGL+ D R + L+ ++DT LF H +P +R SL+ +
Sbjct: 1061 TYLKLRFLIDIGVKFVGHGLQKDFRVINLMVPKDQVLDTVYLF-H---MPRKRMISLRFL 1116
Query: 202 VSQLLHQSIQSGTHDSFEDARACIDL 227
L IQ THDS EDAR + L
Sbjct: 1117 AWYFLDLKIQGETHDSIEDARTALQL 1142
>MGI|MGI:1918984 [details] [associations]
symbol:Pan2 "PAN2 polyA specific ribonuclease subunit
homolog (S. cerevisiae)" species:10090 "Mus musculus" [GO:0000175
"3'-5'-exoribonuclease activity" evidence=ISO] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0000289 "nuclear-transcribed mRNA poly(A)
tail shortening" evidence=ISO] [GO:0000291 "nuclear-transcribed
mRNA catabolic process, exonucleolytic" evidence=ISO] [GO:0000932
"cytoplasmic mRNA processing body" evidence=IDA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] [GO:0004518 "nuclease
activity" evidence=IEA] [GO:0004527 "exonuclease activity"
evidence=IEA] [GO:0004535 "poly(A)-specific ribonuclease activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001394 InterPro:IPR006055 InterPro:IPR012337
InterPro:IPR015943 PROSITE:PS50235 SMART:SM00479 Pfam:PF00929
MGI:MGI:1918984 GO:GO:0005634 GO:GO:0000184 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0003676 GO:GO:0090305 GO:GO:0006511
eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098 GO:GO:0000932
GO:GO:0004221 GO:GO:0004535 KO:K12571 CTD:9924 HOGENOM:HOG000230585
HOVERGEN:HBG089847 OrthoDB:EOG4HQDHH OMA:TQLHQDM MEROPS:C19.978
EMBL:AK129196 EMBL:AK047887 EMBL:AK089001 EMBL:AK157800
EMBL:BC075686 EMBL:BC079841 IPI:IPI00221595 IPI:IPI00830428
IPI:IPI00831588 IPI:IPI00831685 RefSeq:NP_001239255.1
RefSeq:NP_001239256.1 RefSeq:NP_598753.1 UniGene:Mm.244183
UniGene:Mm.489673 ProteinModelPortal:Q8BGF7 SMR:Q8BGF7
STRING:Q8BGF7 PhosphoSite:Q8BGF7 PaxDb:Q8BGF7 PRIDE:Q8BGF7
Ensembl:ENSMUST00000005825 GeneID:103135 KEGG:mmu:103135
UCSC:uc007hme.1 UCSC:uc007hmf.1 UCSC:uc007hmg.1
GeneTree:ENSGT00390000013978 InParanoid:Q8BGF7 ChiTaRS:PAN2
NextBio:355801 Bgee:Q8BGF7 Genevestigator:Q8BGF7 Uniprot:Q8BGF7
Length = 1200
Score = 150 (57.9 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 48/146 (32%), Positives = 70/146 (47%)
Query: 94 LEVARVTVVNV----DGRLIYNTLVKPDCEIIDYNTKYSGISAKDF---IRNPY-KTLKD 145
+ VAR+T V +G + + +++DY T+YSGI D I + + TLK
Sbjct: 1004 MSVARITCVRGQGPNEGIPFIDDYISTQEQVVDYLTQYSGIKPGDLDAKISSKHLTTLKS 1063
Query: 146 VQNDLMGFVSKDSIIVGHGLENDLRALKLI--HSNIIDTSVLFPHSFGLPYRR--SLKSI 201
L + VGHGL+ D R + L+ ++DT LF H +P +R SL+ +
Sbjct: 1064 TYLKLRFLIDIGVKFVGHGLQKDFRVINLMVPKDQVLDTVYLF-H---MPRKRMISLRFL 1119
Query: 202 VSQLLHQSIQSGTHDSFEDARACIDL 227
L IQ THDS EDAR + L
Sbjct: 1120 AWYFLDLKIQGETHDSIEDARTALQL 1145
>UNIPROTKB|Q504Q3 [details] [associations]
symbol:PAN2 "PAB-dependent poly(A)-specific ribonuclease
subunit 2" species:9606 "Homo sapiens" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0000184 "nuclear-transcribed
mRNA catabolic process, nonsense-mediated decay" evidence=IEA]
[GO:0000932 "cytoplasmic mRNA processing body" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000288
"nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=TAS] [GO:0000289
"nuclear-transcribed mRNA poly(A) tail shortening" evidence=TAS]
[GO:0004535 "poly(A)-specific ribonuclease activity" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS]
Reactome:REACT_71 Reactome:REACT_21257 InterPro:IPR017986
InterPro:IPR001394 InterPro:IPR006055 InterPro:IPR012337
InterPro:IPR015943 PROSITE:PS50235 SMART:SM00479 Pfam:PF00929
EMBL:AB107585 GO:GO:0005829 GO:GO:0005634 GO:GO:0000184
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0003676 GO:GO:0006511
eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098 GO:GO:0004221
GO:GO:0004535 GO:GO:0000289 CleanEx:HS_PAN2 KO:K12571 CTD:9924
HOGENOM:HOG000230585 HOVERGEN:HBG089847 OrthoDB:EOG4HQDHH
OMA:TQLHQDM EMBL:AB014610 EMBL:BC024043 EMBL:BC094885
IPI:IPI00328254 IPI:IPI00747362 IPI:IPI00796020
RefSeq:NP_001120932.1 RefSeq:NP_001159751.1 RefSeq:NP_055686.3
UniGene:Hs.273397 ProteinModelPortal:Q504Q3 SMR:Q504Q3
DIP:DIP-50708N IntAct:Q504Q3 STRING:Q504Q3 MEROPS:C19.978
PhosphoSite:Q504Q3 DMDM:296439280 PaxDb:Q504Q3 PRIDE:Q504Q3
Ensembl:ENST00000257931 Ensembl:ENST00000425394
Ensembl:ENST00000440411 Ensembl:ENST00000548043 GeneID:9924
KEGG:hsa:9924 UCSC:uc001skx.3 UCSC:uc001sky.3 UCSC:uc001skz.3
GeneCards:GC12M056710 HGNC:HGNC:20074 neXtProt:NX_Q504Q3
PharmGKB:PA162398664 InParanoid:Q504Q3 GenomeRNAi:9924
NextBio:37442 ArrayExpress:Q504Q3 Bgee:Q504Q3 Genevestigator:Q504Q3
Uniprot:Q504Q3
Length = 1202
Score = 150 (57.9 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 48/146 (32%), Positives = 70/146 (47%)
Query: 94 LEVARVTVVNV----DGRLIYNTLVKPDCEIIDYNTKYSGISAKDF---IRNPY-KTLKD 145
+ VAR+T V +G + + +++DY T+YSGI D I + + TLK
Sbjct: 1005 MSVARITCVRGQGPNEGIPFIDDYISTQEQVVDYLTQYSGIKPGDLDAKISSKHLTTLKS 1064
Query: 146 VQNDLMGFVSKDSIIVGHGLENDLRALKLI--HSNIIDTSVLFPHSFGLPYRR--SLKSI 201
L + VGHGL+ D R + L+ ++DT LF H +P +R SL+ +
Sbjct: 1065 TYLKLRFLIDIGVKFVGHGLQKDFRVINLMVPKDQVLDTVYLF-H---MPRKRMISLRFL 1120
Query: 202 VSQLLHQSIQSGTHDSFEDARACIDL 227
L IQ THDS EDAR + L
Sbjct: 1121 AWYFLDLKIQGETHDSIEDARTALQL 1146
>UNIPROTKB|F1SLY8 [details] [associations]
symbol:PAN2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0004527 "exonuclease activity"
evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001394 InterPro:IPR006055
InterPro:IPR012337 InterPro:IPR015943 PROSITE:PS50235 SMART:SM00479
Pfam:PF00929 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0003676
GO:GO:0005622 GO:GO:0004527 GO:GO:0006511 InterPro:IPR013520
SUPFAM:SSF53098 GO:GO:0004221 OMA:TQLHQDM
GeneTree:ENSGT00390000013978 EMBL:CU498845
Ensembl:ENSSSCT00000000424 Uniprot:F1SLY8
Length = 1205
Score = 150 (57.9 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 48/146 (32%), Positives = 70/146 (47%)
Query: 94 LEVARVTVVNV----DGRLIYNTLVKPDCEIIDYNTKYSGISAKDF---IRNPY-KTLKD 145
+ VAR+T V +G + + +++DY T+YSGI D I + + TLK
Sbjct: 1008 MSVARITCVRGQGPNEGIPFIDDYISTQEQVVDYLTQYSGIKPGDLDAKISSKHLTTLKS 1067
Query: 146 VQNDLMGFVSKDSIIVGHGLENDLRALKLI--HSNIIDTSVLFPHSFGLPYRR--SLKSI 201
L + VGHGL+ D R + L+ ++DT LF H +P +R SL+ +
Sbjct: 1068 TYLKLRFLIDIGVKFVGHGLQKDFRVINLMVPKDQVLDTVYLF-H---MPRKRMISLRFL 1123
Query: 202 VSQLLHQSIQSGTHDSFEDARACIDL 227
L IQ THDS EDAR + L
Sbjct: 1124 AWYFLDLKIQGETHDSIEDARTALQL 1149
>RGD|1303301 [details] [associations]
symbol:Pan2 "PAN2 polyA specific ribonuclease subunit homolog
(S. cerevisiae)" species:10116 "Rattus norvegicus" [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA;ISO] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0004535
"poly(A)-specific ribonuclease activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001394
InterPro:IPR006055 InterPro:IPR012337 InterPro:IPR015943
PROSITE:PS50235 SMART:SM00479 Pfam:PF00929 RGD:1303301
GO:GO:0005634 GO:GO:0005737 GO:GO:0000184 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0003676 GO:GO:0090305 GO:GO:0006511
eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098 GO:GO:0004221
GO:GO:0004535 KO:K12571 CTD:9924 HOGENOM:HOG000230585
HOVERGEN:HBG089847 GeneTree:ENSGT00390000013978 EMBL:AABR03055877
EMBL:BN000323 IPI:IPI00421767 RefSeq:NP_001008862.1 UniGene:Rn.9091
ProteinModelPortal:Q6IE70 STRING:Q6IE70 PhosphoSite:Q6IE70
PRIDE:Q6IE70 Ensembl:ENSRNOT00000050792 GeneID:408200
KEGG:rno:408200 UCSC:RGD:1303301 InParanoid:Q6IE70 NextBio:696390
ArrayExpress:Q6IE70 Genevestigator:Q6IE70 Uniprot:Q6IE70
Length = 1205
Score = 150 (57.9 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 48/146 (32%), Positives = 70/146 (47%)
Query: 94 LEVARVTVVNV----DGRLIYNTLVKPDCEIIDYNTKYSGISAKDF---IRNPY-KTLKD 145
+ VAR+T V +G + + +++DY T+YSGI D I + + TLK
Sbjct: 1005 MSVARITCVRGQGPNEGIPFIDDYISTQEQVVDYLTQYSGIKPGDLDAKISSKHLTTLKS 1064
Query: 146 VQNDLMGFVSKDSIIVGHGLENDLRALKLI--HSNIIDTSVLFPHSFGLPYRR--SLKSI 201
L + VGHGL+ D R + L+ ++DT LF H +P +R SL+ +
Sbjct: 1065 TYLKLRFLIDIGVKFVGHGLQKDFRVINLMVPKDQVLDTVYLF-H---MPRKRMISLRFL 1120
Query: 202 VSQLLHQSIQSGTHDSFEDARACIDL 227
L IQ THDS EDAR + L
Sbjct: 1121 AWYFLDLKIQGETHDSIEDARTALQL 1146
>UNIPROTKB|Q6IE70 [details] [associations]
symbol:Pan2 "PAB-dependent poly(A)-specific ribonuclease
subunit 2" species:10116 "Rattus norvegicus" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] InterPro:IPR017986
InterPro:IPR001394 InterPro:IPR006055 InterPro:IPR012337
InterPro:IPR015943 PROSITE:PS50235 SMART:SM00479 Pfam:PF00929
RGD:1303301 GO:GO:0005634 GO:GO:0005737 GO:GO:0000184
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0003676 GO:GO:0090305
GO:GO:0006511 eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098
GO:GO:0004221 GO:GO:0004535 KO:K12571 CTD:9924 HOGENOM:HOG000230585
HOVERGEN:HBG089847 GeneTree:ENSGT00390000013978 EMBL:AABR03055877
EMBL:BN000323 IPI:IPI00421767 RefSeq:NP_001008862.1 UniGene:Rn.9091
ProteinModelPortal:Q6IE70 STRING:Q6IE70 PhosphoSite:Q6IE70
PRIDE:Q6IE70 Ensembl:ENSRNOT00000050792 GeneID:408200
KEGG:rno:408200 UCSC:RGD:1303301 InParanoid:Q6IE70 NextBio:696390
ArrayExpress:Q6IE70 Genevestigator:Q6IE70 Uniprot:Q6IE70
Length = 1205
Score = 150 (57.9 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 48/146 (32%), Positives = 70/146 (47%)
Query: 94 LEVARVTVVNV----DGRLIYNTLVKPDCEIIDYNTKYSGISAKDF---IRNPY-KTLKD 145
+ VAR+T V +G + + +++DY T+YSGI D I + + TLK
Sbjct: 1005 MSVARITCVRGQGPNEGIPFIDDYISTQEQVVDYLTQYSGIKPGDLDAKISSKHLTTLKS 1064
Query: 146 VQNDLMGFVSKDSIIVGHGLENDLRALKLI--HSNIIDTSVLFPHSFGLPYRR--SLKSI 201
L + VGHGL+ D R + L+ ++DT LF H +P +R SL+ +
Sbjct: 1065 TYLKLRFLIDIGVKFVGHGLQKDFRVINLMVPKDQVLDTVYLF-H---MPRKRMISLRFL 1120
Query: 202 VSQLLHQSIQSGTHDSFEDARACIDL 227
L IQ THDS EDAR + L
Sbjct: 1121 AWYFLDLKIQGETHDSIEDARTALQL 1146
>UNIPROTKB|H0YMM4 [details] [associations]
symbol:ISG20 "Interferon-stimulated gene 20 kDa protein"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 GO:GO:0003676
GO:GO:0005622 GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
HGNC:HGNC:6130 ChiTaRS:ISG20 EMBL:AC104259 Ensembl:ENST00000559876
Bgee:H0YMM4 Uniprot:H0YMM4
Length = 155
Score = 124 (48.7 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 49/154 (31%), Positives = 76/154 (49%)
Query: 80 VYALDTEMVYTVHGLE--VARVTVVNVDGRLIYNTLVKPDCEIIDYNTKYSGISAKDFI- 136
V A+D EMV E +AR ++VNV G ++Y+ ++P+ EI DY T+ SG++ + +
Sbjct: 7 VVAMDCEMVGLGPHRESGLARCSLVNVHGAVLYDKFIRPEGEITDYRTRVSGVTPQHMVG 66
Query: 137 RNPYKT--LKDVQNDLMGFVSKDSIIVGHGLENDL-RALKLIHSNIIDTSVLFPHSFGLP 193
P+ L+ ++ D+ G+ D+ + L R KL H + VL
Sbjct: 67 ATPFAVARLEALKEDMSGYTIYDT-----STDRLLWREAKLDHCRRVSLRVLSE------ 115
Query: 194 YRRSLKSIVSQLLHQSIQSGTHDSFEDARACIDL 227
R KSI + LL G H S EDARA ++L
Sbjct: 116 -RLLHKSIQNSLL------G-HSSVEDARATMEL 141
>DICTYBASE|DDB_G0269694 [details] [associations]
symbol:pan2 "polyA specific ribonuclease subunit"
species:44689 "Dictyostelium discoideum" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0004527 "exonuclease
activity" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0031251 "PAN complex" evidence=ISS] [GO:0006397
"mRNA processing" evidence=ISS] [GO:0006301 "postreplication
repair" evidence=ISS] [GO:0004535 "poly(A)-specific ribonuclease
activity" evidence=ISS] InterPro:IPR017986 InterPro:IPR001394
InterPro:IPR006055 InterPro:IPR012337 InterPro:IPR015943
PROSITE:PS50235 SMART:SM00479 dictyBase:DDB_G0269694 Pfam:PF00929
EMBL:AAFI02000005 GenomeReviews:CM000150_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0006397 GO:GO:0003676 GO:GO:0006511
eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098 GO:GO:0004221
GO:GO:0006301 GO:GO:0004535 KO:K12571 GO:GO:0031251 OMA:SKFGIED
RefSeq:XP_646196.2 ProteinModelPortal:Q55DD5
EnsemblProtists:DDB0237517 GeneID:8617149 KEGG:ddi:DDB_G0269694
InParanoid:Q55DD5 Uniprot:Q55DD5
Length = 1536
Score = 145 (56.1 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 46/139 (33%), Positives = 70/139 (50%)
Query: 96 VARVTVVNVDGRLIYNTLVKPDCEIIDYNTKYSGISAKDF-----IRNPYKTLKDVQNDL 150
+ARV+++ +G ++ ++ + DY T++SGI+ D +N TLK L
Sbjct: 1303 LARVSIIRENGEAFFDDYIQSIEPVTDYLTRFSGINPGDLDPKLSTKNVI-TLKSCYLKL 1361
Query: 151 MGFVSKDSIIVGHGLENDLRALKL-IHSN-IIDTSVLFPHSFGLPYRRSLKSIVSQLLHQ 208
V + VGHGL+ D R + + + N IIDT LF + SL+ + LL
Sbjct: 1362 RYLVDQGVKFVGHGLKKDFRIINIYVPPNQIIDTVELF--QLKNQRKLSLRFLAYILLKI 1419
Query: 209 SIQSGTHDSFEDARACIDL 227
IQS TH S EDA+ +DL
Sbjct: 1420 DIQSETHCSVEDAKTAMDL 1438
>TAIR|locus:2066406 [details] [associations]
symbol:AT2G48100 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0007346 "regulation of mitotic cell cycle" evidence=RCA]
InterPro:IPR006055 InterPro:IPR007087 InterPro:IPR012337
InterPro:IPR015880 PROSITE:PS00028 PROSITE:PS50157 SMART:SM00355
SMART:SM00479 Pfam:PF00929 EMBL:CP002685 GO:GO:0008270
GO:GO:0003676 GO:GO:0005622 GO:GO:0004527 InterPro:IPR013520
SUPFAM:SSF53098 EMBL:AC006072 EMBL:AF386965 EMBL:AY081469
IPI:IPI00546038 PIR:D84923 RefSeq:NP_001031560.1 RefSeq:NP_566124.1
RefSeq:NP_973715.1 UniGene:At.13478 ProteinModelPortal:Q9ZU79
SMR:Q9ZU79 EnsemblPlants:AT2G48100.1 EnsemblPlants:AT2G48100.2
EnsemblPlants:AT2G48100.3 GeneID:819422 KEGG:ath:AT2G48100
TAIR:At2g48100 InParanoid:Q9ZU79 OMA:MRLYKRM PhylomeDB:Q9ZU79
ProtClustDB:CLSN2917359 ArrayExpress:Q9ZU79 Genevestigator:Q9ZU79
Uniprot:Q9ZU79
Length = 344
Score = 136 (52.9 bits), Expect = 7.5e-07, P = 7.5e-07
Identities = 53/187 (28%), Positives = 92/187 (49%)
Query: 60 PLEGYVKTKPRKSPPPNGYGVYALDTEMVYT-VHGL--EVARVTVVNVDGRLIYNTLVKP 116
PL + P S + ALD EMV G + A V +V+ D +I++T V+P
Sbjct: 112 PLGTSTQRNPSSSLAGSRLKAMALDCEMVGGGADGTIDQCASVCLVDDDENVIFSTHVQP 171
Query: 117 DCEIIDYNTKYSGISAKDFIRN-PYKTLKD-VQNDLMGFVSKDS---IIVGHGLENDLRA 171
+ DY + +G++ +D P + +++ V + L G + + ++VGH L +D+
Sbjct: 172 LLPVTDYRHEITGLTKEDLKDGMPLEHVRERVFSFLCGGQNDGAGRLLLVGHDLRHDMSC 231
Query: 172 LKLIH-SNII-DTSVLFPHSFGLPYRRSLKSIVSQLLHQSIQSGTHDSFEDARACIDLI- 228
LKL + S+++ DT+ P +SLK + L IQ G H+ +ED C+ +
Sbjct: 232 LKLEYPSHLLRDTAKYVPLMKTNLVSQSLKYLTKSYLGYKIQCGKHEVYED---CVSAMR 288
Query: 229 LWKLLSD 235
L+K + D
Sbjct: 289 LYKRMRD 295
>SGD|S000003062 [details] [associations]
symbol:PAN2 "Essential subunit of the Pan2p-Pan3p
poly(A)-ribonuclease complex" species:4932 "Saccharomyces
cerevisiae" [GO:0004535 "poly(A)-specific ribonuclease activity"
evidence=IEA;IMP;IPI] [GO:0090305 "nucleic acid phosphodiester bond
hydrolysis" evidence=IEA] [GO:0006301 "postreplication repair"
evidence=IGI;IPI] [GO:0006397 "mRNA processing"
evidence=IEA;IMP;IPI] [GO:0005737 "cytoplasm" evidence=IEA;IDA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004221
"ubiquitin thiolesterase activity" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031124 "mRNA 3'-end processing"
evidence=IMP;IPI] [GO:0031251 "PAN complex" evidence=IDA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0004518
"nuclease activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001394 InterPro:IPR006055 InterPro:IPR012337
InterPro:IPR015943 PROSITE:PS50082 PROSITE:PS50235 PROSITE:PS50294
SMART:SM00479 SGD:S000003062 Pfam:PF00929 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 EMBL:BK006941 GO:GO:0003676
GO:GO:0090305 GO:GO:0006511 eggNOG:COG0847 InterPro:IPR013520
SUPFAM:SSF53098 GO:GO:0004221 GO:GO:0006301 GO:GO:0004535
GO:GO:0031124 KO:K12571 HOGENOM:HOG000230585 OrthoDB:EOG44F9J8
GeneTree:ENSGT00390000013978 GO:GO:0031251 EMBL:U39204 EMBL:Z72616
PIR:S64101 RefSeq:NP_011421.1 ProteinModelPortal:P53010 SMR:P53010
DIP:DIP-2466N IntAct:P53010 MINT:MINT-637100 STRING:P53010
PaxDb:P53010 EnsemblFungi:YGL094C GeneID:852786 KEGG:sce:YGL094C
CYGD:YGL094c OMA:SKFGIED NextBio:972276 Genevestigator:P53010
GermOnline:YGL094C Uniprot:P53010
Length = 1115
Score = 129 (50.5 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 48/149 (32%), Positives = 74/149 (49%)
Query: 96 VARVTVVNVDGRLIYNTLVKPDC-----EIIDYNTKYSGISAKDFIRNPYKTLKD-VQND 149
+AR++++ + +Y D I DY T+YSGI D +P K+ K V+ +
Sbjct: 939 LARISIIRGEEGELYGVPFVDDYVVNTNHIEDYLTRYSGILPGDL--DPEKSTKRLVRRN 996
Query: 150 LMG-----FVSKDSIIVGHGLENDLRALKL-IHSNII-DTSVLFPHSFGLPYRRSLKSIV 202
++ + + VGHGL ND + + + + N I DT++ F G Y SL+ +
Sbjct: 997 VVYRKVWLLMQLGCVFVGHGLNNDFKHININVPRNQIRDTAIYFLQ--GKRYL-SLRYLA 1053
Query: 203 SQLLHQSIQSGTHDSFEDARACIDLILWK 231
LL +IQ G HDS EDA LIL+K
Sbjct: 1054 YVLLGMNIQEGNHDSIEDAHTA--LILYK 1080
>UNIPROTKB|J9NVA5 [details] [associations]
symbol:PAN2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 GO:GO:0003676
GO:GO:0005622 GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00390000013978 EMBL:AAEX03006926
Ensembl:ENSCAFT00000047857 Uniprot:J9NVA5
Length = 437
Score = 124 (48.7 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 42/127 (33%), Positives = 59/127 (46%)
Query: 119 EIIDYNTKYSGISAKDF---IRNPY-KTLKDVQNDLMGFVSKDSIIVGHGLENDLRALKL 174
+++DY T+YSGI D I + + TLK L + VGHGL+ D R + L
Sbjct: 259 QVVDYLTQYSGIKPGDLDAKISSKHLTTLKSTYLKLRFLIDIGVKFVGHGLQKDFRVINL 318
Query: 175 I------------HSNIIDTSVLFPHSFGLPYRR--SLKSIVSQLLHQSIQSGTHDSFED 220
+ ++DT LF H +P +R SL+ + L IQ THDS ED
Sbjct: 319 MVRLPLFYLCQVPKDQVLDTVYLF-H---MPRKRMISLRFLAWYFLDLKIQGETHDSIED 374
Query: 221 ARACIDL 227
AR + L
Sbjct: 375 ARTALQL 381
>UNIPROTKB|H3BLY5 [details] [associations]
symbol:ISG20 "Interferon-stimulated gene 20 kDa protein"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR012337 Pfam:PF00929 GO:GO:0003676
InterPro:IPR013520 SUPFAM:SSF53098 HGNC:HGNC:6130 ChiTaRS:ISG20
EMBL:AC104259 ProteinModelPortal:H3BLY5 SMR:H3BLY5
Ensembl:ENST00000379224 Bgee:H3BLY5 Uniprot:H3BLY5
Length = 87
Score = 102 (41.0 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 22/59 (37%), Positives = 37/59 (62%)
Query: 80 VYALDTEMVYTVHGLE--VARVTVVNVDGRLIYNTLVKPDCEIIDYNTKYSGISAKDFI 136
V A+D EMV E +AR ++VNV G ++Y+ ++P+ EI DY T+ SG++ + +
Sbjct: 7 VVAMDCEMVGLGPHRESGLARCSLVNVHGAVLYDKFIRPEGEITDYRTRVSGVTPQHMV 65
>TAIR|locus:2170533 [details] [associations]
symbol:AT5G40310 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00096 InterPro:IPR006055 InterPro:IPR007087
InterPro:IPR012337 InterPro:IPR015880 PROSITE:PS00028
PROSITE:PS50157 SMART:SM00355 SMART:SM00479 Pfam:PF00929
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 GO:GO:0004527 eggNOG:COG0847 InterPro:IPR013520
SUPFAM:SSF53098 EMBL:AB006702 HOGENOM:HOG000237419
ProtClustDB:CLSN2687545 IPI:IPI00536517 RefSeq:NP_198847.1
UniGene:At.55275 ProteinModelPortal:Q9FNE7 SMR:Q9FNE7
EnsemblPlants:AT5G40310.1 GeneID:834029 KEGG:ath:AT5G40310
TAIR:At5g40310 InParanoid:Q9FNE7 OMA:ITDESEN PhylomeDB:Q9FNE7
Genevestigator:Q9FNE7 Uniprot:Q9FNE7
Length = 348
Score = 121 (47.7 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 42/146 (28%), Positives = 69/146 (47%)
Query: 97 ARVTVVNVDGRLIYNTLVKPDCEIIDYNTKYSGISAKDFIRNPYKTLKDVQNDLMGFV-- 154
ARV + + ++++T VKP + +Y + +GI ++ +R+ + LK Q + F+
Sbjct: 146 ARVCITDESENVVFHTYVKPTIPVTNYRYEMTGIRPEN-LRDAMR-LKHAQRKVQEFLCN 203
Query: 155 -----------SKDSIIVGHGLENDLRALKLIHSN--IIDTSVLFPHSFGLPYRRSLKSI 201
K I+VGHGL+N L +L+L +S+ I DT+ P SLK +
Sbjct: 204 GEPMWKIRPRNGKARILVGHGLDNHLDSLQLEYSSSMIRDTAEYPPLMKSSKLSNSLKYL 263
Query: 202 VSQLLHQSIQSGTHDSFEDARACIDL 227
L I G D +ED A + L
Sbjct: 264 TQAYLGYDIHVGIQDPYEDCVATMRL 289
>TAIR|locus:2086839 [details] [associations]
symbol:AT3G27970 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR006055 InterPro:IPR007087 InterPro:IPR012337
InterPro:IPR015880 PROSITE:PS00028 PROSITE:PS50157 SMART:SM00355
SMART:SM00479 Pfam:PF00929 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 GO:GO:0004527
eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098 EMBL:BT033110
EMBL:AB493636 IPI:IPI00533339 RefSeq:NP_189436.2 UniGene:At.50233
ProteinModelPortal:B3LFC1 SMR:B3LFC1 PaxDb:B3LFC1 PRIDE:B3LFC1
EnsemblPlants:AT3G27970.1 GeneID:822421 KEGG:ath:AT3G27970
TAIR:At3g27970 HOGENOM:HOG000237419 OMA:LPKVECA PhylomeDB:B3LFC1
ProtClustDB:CLSN2687545 Genevestigator:B3LFC1 Uniprot:B3LFC1
Length = 357
Score = 119 (46.9 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 43/146 (29%), Positives = 67/146 (45%)
Query: 97 ARVTVVNVDGRLIYNTLVKPDCEIIDYNTKYSGISAKDFIRNPYKTLKDVQNDLMGFV-- 154
ARV + + +I++T VKP + Y + +GI ++ +R+ LK VQ + F+
Sbjct: 155 ARVCITDESDNVIFHTYVKPSMAVTSYRYETTGIRPEN-LRDAMP-LKQVQRKIQEFLCN 212
Query: 155 -----------SKDSIIVGHGLENDLRALKLIH--SNIIDTSVLFPHSFGLPYRRSLKSI 201
K I+VGHGL++DL L+L + S I DT+ P SLK +
Sbjct: 213 GEPMWKIRPRGGKARILVGHGLDHDLDRLQLEYPSSMIRDTAKYPPLMKTSKLSNSLKYL 272
Query: 202 VSQLLHQSIQSGTHDSFEDARACIDL 227
L + G D +ED A + L
Sbjct: 273 TQAYLGYDVHFGIQDPYEDCVATMRL 298
>UNIPROTKB|H0YMJ6 [details] [associations]
symbol:AEN "Apoptosis-enhancing nuclease" species:9606
"Homo sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR012337 Pfam:PF00929 GO:GO:0005730
GO:GO:0003676 EMBL:AC013489 HGNC:HGNC:25722 InterPro:IPR013520
SUPFAM:SSF53098 Ensembl:ENST00000559528 Bgee:H0YMJ6 Uniprot:H0YMJ6
Length = 179
Score = 109 (43.4 bits), Expect = 0.00018, P = 0.00018
Identities = 39/137 (28%), Positives = 64/137 (46%)
Query: 10 KRLKAKSLTSMSVWERKSLFRK-----LPPRTGFNPVCTSGLRISALDHVGGINGPLEGY 64
KR K +S RK+L ++ +PP G +P+ T +A + L
Sbjct: 28 KRHKRRSRQHQRFMARKALLQEQGLLSMPPEPGSSPLPTPFGAATATEAASSGKQCLRAG 87
Query: 65 VKTKP--RKSPPPNGYG-----VYALDTEMVYT-VHGL--EVARVTVVNVDGRLIYNTLV 114
+ P R+ P G A+D EMV T G E+AR ++V+ G ++Y+ +
Sbjct: 88 SGSAPCSRRPAPGKASGPLPSKCVAIDCEMVGTGPRGRVSELARCSIVSYHGNVLYDKYI 147
Query: 115 KPDCEIIDYNTKYSGIS 131
+P+ I DY T++SGI+
Sbjct: 148 RPEMPIADYRTRWSGIT 164
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.138 0.411 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 240 240 0.00093 113 3 11 22 0.42 33
32 0.44 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 117
No. of states in DFA: 594 (63 KB)
Total size of DFA: 183 KB (2106 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 21.47u 0.07s 21.54t Elapsed: 00:00:04
Total cpu time: 21.50u 0.07s 21.57t Elapsed: 00:00:04
Start: Thu Aug 15 15:19:28 2013 End: Thu Aug 15 15:19:32 2013
WARNINGS ISSUED: 1