Your job contains 1 sequence.
>psy39
MSKAGKVFSKNVKKAVDNFRMIRTNIPAGLASPGPPLGPTLGERGVNIATFCKDFNEKTK
DLKEGLPLPTRIKVNPDRSYKLIIHKPPTSYYLKQAAGMAKGVMKPGKEIGGKLTLKHIY
EIAKIKSEDSAFECETLEYICTSVIGSARSVGIEVVDKLDAEEYQQFLEERKIIVAEQKK
ELEEAKEAKMLRTSG
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy39
(195 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0038234 - symbol:mRpL11 "mitochondrial ribosomal p... 426 5.3e-40 1
ZFIN|ZDB-GENE-040718-294 - symbol:mrpl11 "mitochondrial r... 407 5.5e-38 1
UNIPROTKB|Q9Y3B7 - symbol:MRPL11 "39S ribosomal protein L... 376 1.1e-34 1
UNIPROTKB|Q2YDI0 - symbol:MRPL11 "39S ribosomal protein L... 374 1.7e-34 1
UNIPROTKB|F1RU54 - symbol:MRPL11 "Uncharacterized protein... 373 2.2e-34 1
UNIPROTKB|E2RBT1 - symbol:MRPL11 "Uncharacterized protein... 372 2.8e-34 1
MGI|MGI:2137215 - symbol:Mrpl11 "mitochondrial ribosomal ... 371 3.6e-34 1
RGD|1359665 - symbol:mrpl11 "mitochondrial ribosomal prot... 370 4.6e-34 1
UNIPROTKB|Q5XIE3 - symbol:Mrpl11 "39S ribosomal protein L... 370 4.6e-34 1
WB|WBGene00015133 - symbol:mrpl-11 species:6239 "Caenorha... 359 6.7e-33 1
ASPGD|ASPL0000056238 - symbol:AN0116 species:162425 "Emer... 264 7.8e-23 1
POMBASE|SPAC1486.07c - symbol:mrpl19 "mitochondrial ribos... 255 7.0e-22 1
CGD|CAL0000474 - symbol:MRPL19 species:5476 "Candida albi... 248 3.9e-21 1
TAIR|locus:2117627 - symbol:MRPL11 "mitochondrial ribosom... 243 1.3e-20 1
TIGR_CMR|SPO_3514 - symbol:SPO_3514 "ribosomal protein L1... 239 3.5e-20 1
UNIPROTKB|P0A7J7 - symbol:rplK "50S ribosomal subunit pro... 220 3.6e-18 1
SGD|S000005129 - symbol:MRPL19 "Mitochondrial ribosomal p... 218 5.8e-18 1
TIGR_CMR|ECH_0956 - symbol:ECH_0956 "ribosomal protein L1... 211 3.2e-17 1
TIGR_CMR|CJE_0524 - symbol:CJE_0524 "ribosomal protein L1... 210 4.1e-17 1
TIGR_CMR|CPS_4773 - symbol:CPS_4773 "ribosomal protein L1... 209 5.3e-17 1
TIGR_CMR|CHY_2323 - symbol:CHY_2323 "ribosomal protein L1... 205 1.4e-16 1
UNIPROTKB|Q9KV34 - symbol:rplK "50S ribosomal protein L11... 204 1.8e-16 1
TIGR_CMR|SO_0220 - symbol:SO_0220 "ribosomal protein L11"... 204 1.8e-16 1
TIGR_CMR|VC_0324 - symbol:VC_0324 "ribosomal protein L11"... 204 1.8e-16 1
TIGR_CMR|CBU_0226 - symbol:CBU_0226 "ribosomal protein L1... 200 4.7e-16 1
TIGR_CMR|GSU_2867 - symbol:GSU_2867 "ribosomal protein L1... 198 7.7e-16 1
TAIR|locus:2037970 - symbol:PRPL11 "plastid ribosomal pro... 190 5.4e-15 1
GENEDB_PFALCIPARUM|PF11_0113 - symbol:PF11_0113 "ribosoma... 176 1.6e-13 1
UNIPROTKB|Q8IIQ5 - symbol:PF11_0113 "Mitochondrial riboso... 176 1.6e-13 1
TIGR_CMR|DET_0993 - symbol:DET_0993 "ribosomal protein L1... 176 1.6e-13 1
TIGR_CMR|APH_1028 - symbol:APH_1028 "ribosomal protein L1... 174 2.7e-13 1
UNIPROTKB|P66056 - symbol:rplK "50S ribosomal protein L11... 173 3.4e-13 1
TIGR_CMR|BA_0097 - symbol:BA_0097 "ribosomal protein L11"... 173 3.4e-13 1
TAIR|locus:2153162 - symbol:AT5G51610 species:3702 "Arabi... 128 2.0e-08 1
UNIPROTKB|E9PQB6 - symbol:MRPL11 "39S ribosomal protein L... 127 2.6e-08 1
UNIPROTKB|H0YCD5 - symbol:MRPL11 "39S ribosomal protein L... 87 0.00063 1
>FB|FBgn0038234 [details] [associations]
symbol:mRpL11 "mitochondrial ribosomal protein L11"
species:7227 "Drosophila melanogaster" [GO:0005762 "mitochondrial
large ribosomal subunit" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0003735 "structural constituent of ribosome"
evidence=ISS] InterPro:IPR000911 InterPro:IPR020783 Pfam:PF00298
PROSITE:PS00359 SMART:SM00649 Pfam:PF03946 EMBL:AE014297
GO:GO:0006417 GO:GO:0006412 GO:GO:0005762 GO:GO:0003735
GO:GO:0031047 eggNOG:COG0080 Gene3D:1.10.10.250 Gene3D:3.30.1550.10
InterPro:IPR020784 PANTHER:PTHR11661 SUPFAM:SSF46906
SUPFAM:SSF54747 CTD:65003 GeneTree:ENSGT00390000003153 OMA:CKDFNEK
EMBL:AY094892 RefSeq:NP_524351.1 UniGene:Dm.14087
ProteinModelPortal:Q9VFJ2 SMR:Q9VFJ2 DIP:DIP-23522N IntAct:Q9VFJ2
MINT:MINT-1624235 STRING:Q9VFJ2 PaxDb:Q9VFJ2 PRIDE:Q9VFJ2
EnsemblMetazoa:FBtr0082953 GeneID:41757 KEGG:dme:Dmel_CG3351
FlyBase:FBgn0038234 InParanoid:Q9VFJ2 OrthoDB:EOG4XD27D
PhylomeDB:Q9VFJ2 GenomeRNAi:41757 NextBio:825423 Bgee:Q9VFJ2
GermOnline:CG3351 Uniprot:Q9VFJ2
Length = 196
Score = 426 (155.0 bits), Expect = 5.3e-40, P = 5.3e-40
Identities = 91/197 (46%), Positives = 121/197 (61%)
Query: 1 MSKA-GKVFSKNVKKAVDNFR---MIRTNIXXXXXXXXXXXXXXXXERGVNIATFCKDFN 56
MSKA GK+ K++KK V+ ++TNI +R +NIA FCKDFN
Sbjct: 1 MSKAAGKL--KSLKKTVERVTHTSKLKTNIPAGMAAAGPPLGPMLGQRAINIAAFCKDFN 58
Query: 57 EKTKDLKEGLPLPTRIKVNPDRSYKLIIHKPPTSYYLKQAAGMAKGVMKPGKEIGGKLTL 116
KT ++KEG+PLP RI VN DRSY L IH PP +++LKQAAG+ +G M PGKE+ G +TL
Sbjct: 59 AKTAEMKEGVPLPCRISVNSDRSYDLAIHHPPATFFLKQAAGIQRGTMTPGKEVAGMITL 118
Query: 117 KHIYEIAKIKSEDSAFECETLEYICTSVIGSARSVGIEVVDKLDAEEYQQFLEERKIIVX 176
KH+YEIA IK +D T++ +C +I AR+ GI+VV ++D Y +FLEERK+IV
Sbjct: 119 KHLYEIAAIKIQDPPNVLLTMQQMCEMLISIARTCGIKVVREIDPAAYGEFLEERKLIVE 178
Query: 177 XXXXXXXXXXXXXMLRT 193
MLRT
Sbjct: 179 QQRRELQEKREAKMLRT 195
>ZFIN|ZDB-GENE-040718-294 [details] [associations]
symbol:mrpl11 "mitochondrial ribosomal protein L11"
species:7955 "Danio rerio" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] InterPro:IPR000911
InterPro:IPR006519 InterPro:IPR020783 InterPro:IPR020785
Pfam:PF00298 PROSITE:PS00359 SMART:SM00649 Pfam:PF03946
ZFIN:ZDB-GENE-040718-294 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
eggNOG:COG0080 HOGENOM:HOG000082123 Gene3D:1.10.10.250
Gene3D:3.30.1550.10 InterPro:IPR020784 PANTHER:PTHR11661
SUPFAM:SSF46906 SUPFAM:SSF54747 TIGRFAMs:TIGR01632 CTD:65003
HOVERGEN:HBG036110 OrthoDB:EOG46Q6TQ EMBL:BC076246 IPI:IPI00484175
RefSeq:NP_001002556.1 UniGene:Dr.27215 ProteinModelPortal:Q6DGU3
STRING:Q6DGU3 GeneID:436829 KEGG:dre:436829 InParanoid:Q6DGU3
NextBio:20831261 Uniprot:Q6DGU3
Length = 196
Score = 407 (148.3 bits), Expect = 5.5e-38, P = 5.5e-38
Identities = 84/177 (47%), Positives = 117/177 (66%)
Query: 1 MSKAGKVFSKNVKKAVDNFRMIRTNIXXXXXXXXXXXXXXXXERGVNIATFCKDFNEKTK 60
MSK K +K VKK+ D +IR + ++G+ I FCKDFNE+TK
Sbjct: 1 MSKISKA-AKAVKKS-DTGGLIRAIVRSGQAAPGPPLGPILGQKGIPIGAFCKDFNERTK 58
Query: 61 DLKEGLPLPTRIKVNPDRSYKLIIHKPPTSYYLKQAAGMAKGVMKPGKEIGGKLTLKHIY 120
DLKEG+PLP +I V PDR+Y L I +P SY+LKQAAG+ KG K G EI G +T++ +Y
Sbjct: 59 DLKEGIPLPVKINVKPDRTYDLKIGQPTVSYFLKQAAGIEKGAGKTGHEIAGMVTVRAVY 118
Query: 121 EIAKIKSEDSAFECE--TLEYICTSVIGSARSVGIEVVDKLDAEEYQQFLEERKIIV 175
EIA++KS+D F+ T++ + S+IGSARS+GI+VV+ L EEY +FL ER++I+
Sbjct: 119 EIARVKSQDECFKLRDTTMQNVVKSIIGSARSLGIQVVNDLSPEEYGEFLREREVIL 175
>UNIPROTKB|Q9Y3B7 [details] [associations]
symbol:MRPL11 "39S ribosomal protein L11, mitochondrial"
species:9606 "Homo sapiens" [GO:0005761 "mitochondrial ribosome"
evidence=NAS] [GO:0006412 "translation" evidence=NAS] [GO:0003735
"structural constituent of ribosome" evidence=NAS] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR000911
InterPro:IPR006519 InterPro:IPR020783 Pfam:PF00298 PROSITE:PS00359
SMART:SM00649 EMBL:AB049638 Pfam:PF03946 GO:GO:0006412
EMBL:CH471076 GO:GO:0005840 GO:GO:0003735 EMBL:AP002748
GO:GO:0005761 eggNOG:COG0080 HOGENOM:HOG000082123
Gene3D:1.10.10.250 Gene3D:3.30.1550.10 InterPro:IPR020784
PANTHER:PTHR11661 SUPFAM:SSF46906 SUPFAM:SSF54747
TIGRFAMs:TIGR01632 CTD:65003 HOVERGEN:HBG036110 OMA:CKDFNEK
OrthoDB:EOG46Q6TQ EMBL:AF151871 EMBL:AK290084 EMBL:BC005002
EMBL:BC108277 EMBL:BM554886 EMBL:AB051338 IPI:IPI00007001
IPI:IPI00333848 IPI:IPI00377233 RefSeq:NP_057134.1
RefSeq:NP_733934.1 RefSeq:NP_733935.1 UniGene:Hs.418450
ProteinModelPortal:Q9Y3B7 SMR:Q9Y3B7 IntAct:Q9Y3B7 STRING:Q9Y3B7
PhosphoSite:Q9Y3B7 DMDM:22001931 PaxDb:Q9Y3B7 PRIDE:Q9Y3B7
DNASU:65003 Ensembl:ENST00000310999 Ensembl:ENST00000329819
Ensembl:ENST00000430466 GeneID:65003 KEGG:hsa:65003 UCSC:uc001ohz.4
UCSC:uc001oia.4 GeneCards:GC11M066202 HGNC:HGNC:14042 MIM:611826
neXtProt:NX_Q9Y3B7 PharmGKB:PA30940 InParanoid:Q9Y3B7
PhylomeDB:Q9Y3B7 ChiTaRS:MRPL11 GenomeRNAi:65003 NextBio:67180
ArrayExpress:Q9Y3B7 Bgee:Q9Y3B7 CleanEx:HS_MRPL11
Genevestigator:Q9Y3B7 GermOnline:ENSG00000174547 Uniprot:Q9Y3B7
Length = 192
Score = 376 (137.4 bits), Expect = 1.1e-34, P = 1.1e-34
Identities = 72/135 (53%), Positives = 100/135 (74%)
Query: 43 ERGVNIATFCKDFNEKTKDLKEGLPLPTRIKVNPDRSYKLIIHKPPTSYYLKQAAGMAKG 102
+RGV+I FCK+FNE+TKD+KEG+PLPT+I V PDR++++ I +P SY+LK AAG+ KG
Sbjct: 41 QRGVSINQFCKEFNERTKDIKEGIPLPTKILVKPDRTFEIKIGQPTVSYFLKAAAGIEKG 100
Query: 103 VMKPGKEIGGKLTLKHIYEIAKIKSEDSAFECET--LEYICTSVIGSARSVGIEVVDKLD 160
+ GKE+ G +TLKH+YEIA+IK++D AF + L + S+IGSARS+GI VV L
Sbjct: 101 ARQTGKEVAGLVTLKHVYEIARIKAQDEAFALQDVPLSSVVRSIIGSARSLGIRVVKDLS 160
Query: 161 AEEYQQFLEERKIIV 175
+EE F +ER I +
Sbjct: 161 SEELAAFQKERAIFL 175
>UNIPROTKB|Q2YDI0 [details] [associations]
symbol:MRPL11 "39S ribosomal protein L11, mitochondrial"
species:9913 "Bos taurus" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] InterPro:IPR000911 InterPro:IPR006519
InterPro:IPR020783 Pfam:PF00298 PROSITE:PS00359 SMART:SM00649
Pfam:PF03946 GO:GO:0005739 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 eggNOG:COG0080 HOGENOM:HOG000082123
Gene3D:1.10.10.250 Gene3D:3.30.1550.10 InterPro:IPR020784
PANTHER:PTHR11661 SUPFAM:SSF46906 SUPFAM:SSF54747
TIGRFAMs:TIGR01632 PDB:2FTC PDBsum:2FTC EMBL:BT021538 EMBL:BC110214
IPI:IPI00696336 RefSeq:NP_001014932.1 UniGene:Bt.1415
ProteinModelPortal:Q2YDI0 STRING:Q2YDI0 Ensembl:ENSBTAT00000019979
GeneID:515990 KEGG:bta:515990 CTD:65003
GeneTree:ENSGT00390000003153 HOVERGEN:HBG036110 InParanoid:Q2YDI0
OMA:CKDFNEK OrthoDB:EOG46Q6TQ EvolutionaryTrace:Q2YDI0
NextBio:20872082 Uniprot:Q2YDI0
Length = 192
Score = 374 (136.7 bits), Expect = 1.7e-34, P = 1.7e-34
Identities = 71/135 (52%), Positives = 99/135 (73%)
Query: 43 ERGVNIATFCKDFNEKTKDLKEGLPLPTRIKVNPDRSYKLIIHKPPTSYYLKQAAGMAKG 102
+RGV+I FCK+FNEKTKD+KEG+PLPT+I V PDR++++ I +P SY+LK AAG+ KG
Sbjct: 41 QRGVSINQFCKEFNEKTKDIKEGIPLPTKIFVKPDRTFEIKIGQPTVSYFLKAAAGIEKG 100
Query: 103 VMKPGKEIGGKLTLKHIYEIAKIKSEDSAFECET--LEYICTSVIGSARSVGIEVVDKLD 160
GKE+ G +TLKH+YEIA++K++D AF + L + S+IGSARS+GI VV L
Sbjct: 101 ARNTGKEVAGLVTLKHVYEIARVKAQDDAFALQDVPLSSVVRSIIGSARSLGIRVVKDLS 160
Query: 161 AEEYQQFLEERKIIV 175
+EE F +ER + +
Sbjct: 161 SEELAAFQKERALFL 175
>UNIPROTKB|F1RU54 [details] [associations]
symbol:MRPL11 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
InterPro:IPR000911 InterPro:IPR006519 InterPro:IPR020783
Pfam:PF00298 SMART:SM00649 Pfam:PF03946 GO:GO:0005739 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 Gene3D:1.10.10.250 Gene3D:3.30.1550.10
InterPro:IPR020784 PANTHER:PTHR11661 SUPFAM:SSF46906
SUPFAM:SSF54747 TIGRFAMs:TIGR01632 GeneTree:ENSGT00390000003153
OMA:CKDFNEK EMBL:CU928034 RefSeq:XP_003122536.1
Ensembl:ENSSSCT00000014148 GeneID:100518767 KEGG:ssc:100518767
Uniprot:F1RU54
Length = 192
Score = 373 (136.4 bits), Expect = 2.2e-34, P = 2.2e-34
Identities = 71/135 (52%), Positives = 99/135 (73%)
Query: 43 ERGVNIATFCKDFNEKTKDLKEGLPLPTRIKVNPDRSYKLIIHKPPTSYYLKQAAGMAKG 102
+RGV+I FCK+FNEKTKD+KEG+PLPT+I V PDR++++ I +P SY+LK AAG+ KG
Sbjct: 41 QRGVSINQFCKEFNEKTKDIKEGIPLPTKIFVKPDRTFEIKIGQPTVSYFLKAAAGIEKG 100
Query: 103 VMKPGKEIGGKLTLKHIYEIAKIKSEDSAFECET--LEYICTSVIGSARSVGIEVVDKLD 160
GKE+ G +TLKH+YEIA++K++D AF + L + S+IGSARS+GI VV L
Sbjct: 101 ARHTGKEVAGLVTLKHVYEIARVKAQDDAFALQDVPLSSVVRSIIGSARSLGIRVVKDLS 160
Query: 161 AEEYQQFLEERKIIV 175
+EE F +ER + +
Sbjct: 161 SEELAAFQKERALFL 175
>UNIPROTKB|E2RBT1 [details] [associations]
symbol:MRPL11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] InterPro:IPR000911 InterPro:IPR006519
InterPro:IPR020783 Pfam:PF00298 SMART:SM00649 Pfam:PF03946
GO:GO:0005739 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:1.10.10.250 Gene3D:3.30.1550.10 InterPro:IPR020784
PANTHER:PTHR11661 SUPFAM:SSF46906 SUPFAM:SSF54747
TIGRFAMs:TIGR01632 CTD:65003 GeneTree:ENSGT00390000003153
OMA:CKDFNEK EMBL:AAEX03011628 RefSeq:XP_533221.1
ProteinModelPortal:E2RBT1 Ensembl:ENSCAFT00000020140 GeneID:476012
KEGG:cfa:476012 NextBio:20851744 Uniprot:E2RBT1
Length = 192
Score = 372 (136.0 bits), Expect = 2.8e-34, P = 2.8e-34
Identities = 71/131 (54%), Positives = 98/131 (74%)
Query: 43 ERGVNIATFCKDFNEKTKDLKEGLPLPTRIKVNPDRSYKLIIHKPPTSYYLKQAAGMAKG 102
+RGV+I FCK+FNEKTKD+KEG+PLPT+I V PDR++++ I +P SY+LK AAG+ KG
Sbjct: 41 QRGVSINQFCKEFNEKTKDIKEGIPLPTKIFVKPDRTFEIKIGQPTVSYFLKAAAGIEKG 100
Query: 103 VMKPGKEIGGKLTLKHIYEIAKIKSEDSAFECET--LEYICTSVIGSARSVGIEVVDKLD 160
+ GKE+ G +TLKH+YEIA++K++D AF + L + S+IGSARS+GI VV L
Sbjct: 101 ARQTGKEVAGLVTLKHVYEIAQVKAQDEAFALQDVPLSSVVRSIIGSARSLGIRVVKDLS 160
Query: 161 AEEYQQFLEER 171
+EE F +ER
Sbjct: 161 SEELAAFQKER 171
>MGI|MGI:2137215 [details] [associations]
symbol:Mrpl11 "mitochondrial ribosomal protein L11"
species:10090 "Mus musculus" [GO:0003735 "structural constituent of
ribosome" evidence=ISO] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005762 "mitochondrial large ribosomal subunit" evidence=ISO]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=ISO] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR000911 InterPro:IPR006519 InterPro:IPR020783
Pfam:PF00298 PROSITE:PS00359 SMART:SM00649 MGI:MGI:2137215
Pfam:PF03946 GO:GO:0005739 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 eggNOG:COG0080 HOGENOM:HOG000082123
Gene3D:1.10.10.250 Gene3D:3.30.1550.10 InterPro:IPR020784
PANTHER:PTHR11661 SUPFAM:SSF46906 SUPFAM:SSF54747
TIGRFAMs:TIGR01632 CTD:65003 GeneTree:ENSGT00390000003153
HOVERGEN:HBG036110 OMA:CKDFNEK OrthoDB:EOG46Q6TQ EMBL:AB049639
EMBL:AK002797 EMBL:AK010329 EMBL:AK167247 EMBL:BC046750
IPI:IPI00132470 RefSeq:NP_079829.1 UniGene:Mm.28494
ProteinModelPortal:Q9CQF0 SMR:Q9CQF0 STRING:Q9CQF0
PhosphoSite:Q9CQF0 PaxDb:Q9CQF0 PRIDE:Q9CQF0
Ensembl:ENSMUST00000025836 GeneID:66419 KEGG:mmu:66419
UCSC:uc008gbt.2 InParanoid:Q9CQF0 NextBio:321635 Bgee:Q9CQF0
CleanEx:MM_MRPL11 Genevestigator:Q9CQF0
GermOnline:ENSMUSG00000024902 Uniprot:Q9CQF0
Length = 192
Score = 371 (135.7 bits), Expect = 3.6e-34, P = 3.6e-34
Identities = 71/135 (52%), Positives = 99/135 (73%)
Query: 43 ERGVNIATFCKDFNEKTKDLKEGLPLPTRIKVNPDRSYKLIIHKPPTSYYLKQAAGMAKG 102
+RGV+I FCK+FNEKTKD+KEG+PLPT+I + PDR+++L I +P SY+LK AAG+ KG
Sbjct: 41 QRGVSINQFCKEFNEKTKDIKEGIPLPTKIFIKPDRTFELKIGQPTVSYFLKAAAGIEKG 100
Query: 103 VMKPGKEIGGKLTLKHIYEIAKIKSEDSAFECET--LEYICTSVIGSARSVGIEVVDKLD 160
GKE+ G ++LKH+YEIA +K++D AF + L + S+IGSARS+GI VV L
Sbjct: 101 ARHTGKEVAGLVSLKHVYEIACVKAKDDAFAMQDVPLSSVVRSIIGSARSLGIRVVKDLS 160
Query: 161 AEEYQQFLEERKIIV 175
AEE + F +ER + +
Sbjct: 161 AEELEAFQKERAVFL 175
>RGD|1359665 [details] [associations]
symbol:mrpl11 "mitochondrial ribosomal protein L11"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] InterPro:IPR000911 InterPro:IPR006519
InterPro:IPR020783 Pfam:PF00298 SMART:SM00649 RGD:1359665
Pfam:PF03946 GO:GO:0005739 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 eggNOG:COG0080 HOGENOM:HOG000082123
Gene3D:1.10.10.250 Gene3D:3.30.1550.10 InterPro:IPR020784
PANTHER:PTHR11661 SUPFAM:SSF46906 SUPFAM:SSF54747
TIGRFAMs:TIGR01632 CTD:65003 GeneTree:ENSGT00390000003153
HOVERGEN:HBG036110 EMBL:BC083740 IPI:IPI00198125
RefSeq:NP_001006974.1 UniGene:Rn.3762 ProteinModelPortal:Q5XIE3
STRING:Q5XIE3 Ensembl:ENSRNOT00000027091 GeneID:293666
KEGG:rno:293666 UCSC:RGD:1359665 InParanoid:Q5XIE3 NextBio:636676
ArrayExpress:Q5XIE3 Genevestigator:Q5XIE3
GermOnline:ENSRNOG00000019970 Uniprot:Q5XIE3
Length = 203
Score = 370 (135.3 bits), Expect = 4.6e-34, P = 4.6e-34
Identities = 78/177 (44%), Positives = 115/177 (64%)
Query: 1 MSKAGKVFSKNVKKAVDNFRMIRTNIXXXXXXXXXXXXXXXXERGVNIATFCKDFNEKTK 60
MSK +V ++ +KK + +IR+ + +RGV+I FCK+FNEKTK
Sbjct: 1 MSKLSRV-TRTLKKP-EAGGVIRSIVRAGQAIPGPPLGPILGQRGVSINQFCKEFNEKTK 58
Query: 61 DLKEGLPLPTRIKVNPDRSYKLIIHKPPTSYYLKQAAGMAKGVMKPGKEIGGKLTLKHIY 120
D+KEG+PLPT+I + PDR+++L I +P SY+LK AAG+ KG + GKE+ G ++LKH+Y
Sbjct: 59 DIKEGIPLPTKIFIKPDRTFELKIGQPTISYFLKAAAGIEKGARQTGKEVAGLVSLKHVY 118
Query: 121 EIAKIKSEDSAFECET--LEYICTSVIGSARSVGIEVVDKLDAEEYQQFLEERKIIV 175
EIA++K++D AF + L I S+IGSARS+GI VV L +E F +ER + +
Sbjct: 119 EIARVKAKDEAFAMQDVPLSSIVRSIIGSARSLGIRVVKDLSVDELAAFQKERAVFL 175
>UNIPROTKB|Q5XIE3 [details] [associations]
symbol:Mrpl11 "39S ribosomal protein L11, mitochondrial"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000911 InterPro:IPR006519 InterPro:IPR020783
Pfam:PF00298 SMART:SM00649 RGD:1359665 Pfam:PF03946 GO:GO:0005739
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 eggNOG:COG0080
HOGENOM:HOG000082123 Gene3D:1.10.10.250 Gene3D:3.30.1550.10
InterPro:IPR020784 PANTHER:PTHR11661 SUPFAM:SSF46906
SUPFAM:SSF54747 TIGRFAMs:TIGR01632 CTD:65003
GeneTree:ENSGT00390000003153 HOVERGEN:HBG036110 EMBL:BC083740
IPI:IPI00198125 RefSeq:NP_001006974.1 UniGene:Rn.3762
ProteinModelPortal:Q5XIE3 STRING:Q5XIE3 Ensembl:ENSRNOT00000027091
GeneID:293666 KEGG:rno:293666 UCSC:RGD:1359665 InParanoid:Q5XIE3
NextBio:636676 ArrayExpress:Q5XIE3 Genevestigator:Q5XIE3
GermOnline:ENSRNOG00000019970 Uniprot:Q5XIE3
Length = 203
Score = 370 (135.3 bits), Expect = 4.6e-34, P = 4.6e-34
Identities = 78/177 (44%), Positives = 115/177 (64%)
Query: 1 MSKAGKVFSKNVKKAVDNFRMIRTNIXXXXXXXXXXXXXXXXERGVNIATFCKDFNEKTK 60
MSK +V ++ +KK + +IR+ + +RGV+I FCK+FNEKTK
Sbjct: 1 MSKLSRV-TRTLKKP-EAGGVIRSIVRAGQAIPGPPLGPILGQRGVSINQFCKEFNEKTK 58
Query: 61 DLKEGLPLPTRIKVNPDRSYKLIIHKPPTSYYLKQAAGMAKGVMKPGKEIGGKLTLKHIY 120
D+KEG+PLPT+I + PDR+++L I +P SY+LK AAG+ KG + GKE+ G ++LKH+Y
Sbjct: 59 DIKEGIPLPTKIFIKPDRTFELKIGQPTISYFLKAAAGIEKGARQTGKEVAGLVSLKHVY 118
Query: 121 EIAKIKSEDSAFECET--LEYICTSVIGSARSVGIEVVDKLDAEEYQQFLEERKIIV 175
EIA++K++D AF + L I S+IGSARS+GI VV L +E F +ER + +
Sbjct: 119 EIARVKAKDEAFAMQDVPLSSIVRSIIGSARSLGIRVVKDLSVDELAAFQKERAVFL 175
>WB|WBGene00015133 [details] [associations]
symbol:mrpl-11 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
InterPro:IPR000911 InterPro:IPR020783 Pfam:PF00298 PROSITE:PS00359
SMART:SM00649 Pfam:PF03946 GO:GO:0005739 GO:GO:0009792
GO:GO:0006898 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 eggNOG:COG0080
HOGENOM:HOG000082123 Gene3D:1.10.10.250 Gene3D:3.30.1550.10
InterPro:IPR020784 PANTHER:PTHR11661 SUPFAM:SSF46906
SUPFAM:SSF54747 GeneTree:ENSGT00390000003153 OMA:CKDFNEK
EMBL:FO080163 PIR:S27795 RefSeq:NP_498923.1
ProteinModelPortal:P34264 SMR:P34264 DIP:DIP-24352N
MINT:MINT-1047973 STRING:P34264 PaxDb:P34264
EnsemblMetazoa:B0303.15 GeneID:181917 KEGG:cel:CELE_B0303.15
UCSC:B0303.15 CTD:181917 WormBase:B0303.15 InParanoid:P34264
NextBio:915782 Uniprot:P34264
Length = 195
Score = 359 (131.4 bits), Expect = 6.7e-33, P = 6.7e-33
Identities = 84/193 (43%), Positives = 112/193 (58%)
Query: 4 AGKVFSKNVKKAVDNFRMIRTNIXXXXXXXXXXXXXXXXERGVNIATFCKDFNEKTKDLK 63
A +V K + K V ++RTNI +RG+N+A FCK+FN++T K
Sbjct: 6 AARVRKKEIVKVVHG-ALLRTNIKAQMASAAPPLGPQLGQRGLNVANFCKEFNKETGHFK 64
Query: 64 EGLPLPTRIKVNPDRSYKLIIHKPPTSYYLKQAAGMAKGVMKPGK-EIGGKLTLKHIYEI 122
+G+PLPTRI V PDR+Y L I P T++ LKQAAG+ +G K K EI GKLT+KH+YEI
Sbjct: 65 QGVPLPTRITVKPDRTYDLEICTPTTTWLLKQAAGIGRG--KASKDEIVGKLTVKHLYEI 122
Query: 123 AKIKSEDSAFECETLEYICTSVIGSARSVGIEV-VDKLDAEEYQQFLEERKIIVXXXXXX 181
AKIKS D A + LE IC +I + R++GI+V LD E ++FL RK V
Sbjct: 123 AKIKSRDKALQHVPLEQICRMLIKTCRTLGIDVQYHDLDPVELKEFLVARKEKVDAQLKD 182
Query: 182 XXXXXXXXMLRTS 194
MLRT+
Sbjct: 183 LADKKAAKMLRTT 195
>ASPGD|ASPL0000056238 [details] [associations]
symbol:AN0116 species:162425 "Emericella nidulans"
[GO:0006412 "translation" evidence=IEA] [GO:0005762 "mitochondrial
large ribosomal subunit" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR000911
InterPro:IPR006519 InterPro:IPR020783 Pfam:PF00298 SMART:SM00649
Pfam:PF03946 EMBL:BN001308 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 EMBL:AACD01000004 eggNOG:COG0080 HOGENOM:HOG000082123
Gene3D:1.10.10.250 Gene3D:3.30.1550.10 InterPro:IPR020784
PANTHER:PTHR11661 SUPFAM:SSF46906 SUPFAM:SSF54747
TIGRFAMs:TIGR01632 OMA:CKDFNEK OrthoDB:EOG4Q8872 RefSeq:XP_657720.1
ProteinModelPortal:Q5BH64 STRING:Q5BH64
EnsemblFungi:CADANIAT00002631 GeneID:2875895 KEGG:ani:AN0116.2
Uniprot:Q5BH64
Length = 153
Score = 264 (98.0 bits), Expect = 7.8e-23, P = 7.8e-23
Identities = 55/150 (36%), Positives = 84/150 (56%)
Query: 13 KKAVDNFRMIRTNIXXXXXXXXXXXXXXXXERGVNIATFCKDFNEKTKDLKEGLPLPTRI 72
KKA+ ++++ + +GV FCK+FN +T + G+P+P R+
Sbjct: 3 KKAIAKDQIVKLIVGAGQASPSPPVGPALGSKGVKSMDFCKEFNARTAHITTGVPIPARV 62
Query: 73 KVNPDRSYKLIIHKPPTSYYLKQAAGMA------KGVMKPGKEIGGKLTLKHIYEIAKIK 126
V PDRS+ + P T+Y L QAA + +G +PG E GK++LKH+YEIAKIK
Sbjct: 63 TVRPDRSFHFDLRTPTTTYLLLQAAKVEPRKNRIRGAQRPGHEFIGKISLKHVYEIAKIK 122
Query: 127 SEDSAFECETLEYICTSVIGSARSVGIEVV 156
++ +LE +C SV+ A+SVGI+VV
Sbjct: 123 QSETRLSGLSLEGLCKSVMAQAKSVGIQVV 152
>POMBASE|SPAC1486.07c [details] [associations]
symbol:mrpl19 "mitochondrial ribosomal protein subunit
L19 (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0003735 "structural constituent of ribosome" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005762 "mitochondrial
large ribosomal subunit" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0032543 "mitochondrial translation" evidence=NAS]
InterPro:IPR000911 InterPro:IPR006519 InterPro:IPR020783
Pfam:PF00298 PROSITE:PS00359 SMART:SM00649 PomBase:SPAC1486.07c
Pfam:PF03946 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0005762
GO:GO:0003735 GO:GO:0032543 eggNOG:COG0080 HOGENOM:HOG000082123
Gene3D:1.10.10.250 Gene3D:3.30.1550.10 InterPro:IPR020784
PANTHER:PTHR11661 SUPFAM:SSF46906 SUPFAM:SSF54747
TIGRFAMs:TIGR01632 HSSP:P29395 OMA:CKDFNEK PIR:T50076
RefSeq:NP_594095.1 ProteinModelPortal:Q9UTK2 STRING:Q9UTK2
EnsemblFungi:SPAC1486.07c.1 GeneID:2541549 KEGG:spo:SPAC1486.07c
OrthoDB:EOG4Q8872 NextBio:20802646 Uniprot:Q9UTK2
Length = 144
Score = 255 (94.8 bits), Expect = 7.0e-22, P = 7.0e-22
Identities = 49/113 (43%), Positives = 72/113 (63%)
Query: 44 RGVNIATFCKDFNEKTKDLKEGLPLPTRIKVNPDRSYKLIIHKPPTSYYLKQAAGMAKGV 103
RG+ FCK+FN +T P+P +I V P R++ IH PPTS+ + + + KG
Sbjct: 31 RGLKSIDFCKEFNARTAGWMPNTPVPCKITVTPQRTFTFTIHTPPTSWLISKTLDLEKGS 90
Query: 104 MKPGKEIGGKLTLKHIYEIAKIKSEDSAFECETLEYICTSVIGSARSVGIEVV 156
P +I G+L+LKHIYEIAK+KS D + + L +C SVIG+A+S+G++VV
Sbjct: 91 SSPLHDIKGQLSLKHIYEIAKLKSTDPSLQGIELLSLCKSVIGTAKSMGVKVV 143
>CGD|CAL0000474 [details] [associations]
symbol:MRPL19 species:5476 "Candida albicans" [GO:0005762
"mitochondrial large ribosomal subunit" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR000911 InterPro:IPR006519 InterPro:IPR020783
Pfam:PF00298 SMART:SM00649 CGD:CAL0000474 Pfam:PF03946
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 EMBL:AACQ01000038
EMBL:AACQ01000037 eggNOG:COG0080 Gene3D:1.10.10.250
Gene3D:3.30.1550.10 InterPro:IPR020784 PANTHER:PTHR11661
SUPFAM:SSF46906 SUPFAM:SSF54747 TIGRFAMs:TIGR01632
RefSeq:XP_718736.1 RefSeq:XP_718820.1 ProteinModelPortal:Q5AAS9
STRING:Q5AAS9 GeneID:3639497 GeneID:3639577 KEGG:cal:CaO19.13611
KEGG:cal:CaO19.6231 Uniprot:Q5AAS9
Length = 143
Score = 248 (92.4 bits), Expect = 3.9e-21, P = 3.9e-21
Identities = 52/113 (46%), Positives = 74/113 (65%)
Query: 44 RGVNIATFCKDFNEKTKDLKEGLPLPTRIKVNPDRSYKLIIHKPPTSYYLKQAAGMAKGV 103
+GV FCK+FN +T +G+P+P I+V PDR++ + PPTS+ L +AAG+ KG
Sbjct: 30 KGVKAIDFCKEFNARTAIYNQGVPIPVIIQVKPDRTFTFEMKSPPTSWLLMKAAGVEKGS 89
Query: 104 MKPGKEIGGKLTLKHIYEIAKIKSEDSAFECETLEYICTSVIGSARSVGIEVV 156
K KE G+++LKHI+EIAKIK D + L+ I SVI +A+ VGI+VV
Sbjct: 90 GKALKEPVGEVSLKHIWEIAKIKKTDDRHKSVDLKAIVGSVISTAKVVGIKVV 142
>TAIR|locus:2117627 [details] [associations]
symbol:MRPL11 "mitochondrial ribosomal protein L11"
species:3702 "Arabidopsis thaliana" [GO:0003735 "structural
constituent of ribosome" evidence=IEA;ISS] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0005840 "ribosome" evidence=ISS]
[GO:0006412 "translation" evidence=IEA] [GO:0022625 "cytosolic
large ribosomal subunit" evidence=ISS] [GO:0042254 "ribosome
biogenesis" evidence=ISS] [GO:0006354 "DNA-dependent transcription,
elongation" evidence=RCA] [GO:0006626 "protein targeting to
mitochondrion" evidence=RCA] InterPro:IPR000911 InterPro:IPR006519
InterPro:IPR020783 Pfam:PF00298 SMART:SM00649 Pfam:PF03946
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 EMBL:AL161587 EMBL:AL117188 eggNOG:COG0080
HOGENOM:HOG000082123 Gene3D:1.10.10.250 Gene3D:3.30.1550.10
InterPro:IPR020784 PANTHER:PTHR11661 SUPFAM:SSF46906
SUPFAM:SSF54747 TIGRFAMs:TIGR01632 HSSP:P29395 OMA:CKDFNEK
EMBL:AY088804 EMBL:BT025614 EMBL:AK226300 IPI:IPI00519099
PIR:T41746 RefSeq:NP_195274.1 UniGene:At.43896
ProteinModelPortal:Q9SVW7 SMR:Q9SVW7 STRING:Q9SVW7 PaxDb:Q9SVW7
PRIDE:Q9SVW7 EnsemblPlants:AT4G35490.1 GeneID:829701
KEGG:ath:AT4G35490 TAIR:At4g35490 InParanoid:Q9SVW7
PhylomeDB:Q9SVW7 ProtClustDB:CLSN2686076 ArrayExpress:Q9SVW7
Genevestigator:Q9SVW7 Uniprot:Q9SVW7
Length = 155
Score = 243 (90.6 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 46/115 (40%), Positives = 71/115 (61%)
Query: 46 VNIATFCKDFNEKTKDLKEGLPLPTRIKVNPDRSYKLIIHKPPTSYYLKQAAGMAKGVMK 105
+N+ FCKDFN +T+ K P+ I D S++ + P S+Y+K+AAG+ KG +
Sbjct: 41 LNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNSFEFTVKSPTVSWYIKKAAGVDKGSTR 100
Query: 106 PGKEIGGKLTLKHIYEIAKIKSEDSAFECETLEYICTSVIGSARSVGIEVVDKLD 160
PG L+++H+YEIAK+K D + LE IC S+IG+A S+GI++V L+
Sbjct: 101 PGHLSVTTLSVRHVYEIAKVKQTDPFCQYMPLESICKSIIGTANSMGIKIVQDLE 155
>TIGR_CMR|SPO_3514 [details] [associations]
symbol:SPO_3514 "ribosomal protein L11" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR000911 InterPro:IPR006519 InterPro:IPR020783
Pfam:PF00298 PROSITE:PS00359 SMART:SM00649 Pfam:PF03946
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 GO:GO:0019843 eggNOG:COG0080 HOGENOM:HOG000082123
KO:K02867 OMA:KQFNAKT Gene3D:1.10.10.250 Gene3D:3.30.1550.10
InterPro:IPR020784 PANTHER:PTHR11661 SUPFAM:SSF46906
SUPFAM:SSF54747 TIGRFAMs:TIGR01632 ProtClustDB:PRK00140
HAMAP:MF_00736_B HSSP:P29395 RefSeq:YP_168709.1
ProteinModelPortal:Q5LMP9 SMR:Q5LMP9 GeneID:3195557
KEGG:sil:SPO3514 PATRIC:23380499 Uniprot:Q5LMP9
Length = 141
Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 49/113 (43%), Positives = 69/113 (61%)
Query: 43 ERGVNIATFCKDFNEKTKDLKEGLPLPTRIKVNPDRSYKLIIHKPPTSYYLKQAAGMAKG 102
+RG+NI FCK FN KT D++ G P PT I D+S+ + I PP SY+LK+AA + G
Sbjct: 30 QRGINIMEFCKAFNAKTADMEVGAPCPTVISYYQDKSFTMDIKTPPASYFLKKAAKIQSG 89
Query: 103 VMKPGKEIGGKLTLKHIYEIAKIKSEDSAFECETLEYICTSVIGSARSVGIEV 155
KP +E G +T+ I EIA+ K +D ++ ++GSARS+GIEV
Sbjct: 90 ANKPSRETAGTVTVAQIREIAEAKMKD--LNANDIDGAMQIILGSARSMGIEV 140
>UNIPROTKB|P0A7J7 [details] [associations]
symbol:rplK "50S ribosomal subunit protein L11"
species:83333 "Escherichia coli K-12" [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0015968 "stringent response" evidence=IDA]
[GO:0006415 "translational termination" evidence=IMP] [GO:0022625
"cytosolic large ribosomal subunit" evidence=IDA] [GO:0019843 "rRNA
binding" evidence=IEA;IDA] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR000911 InterPro:IPR006519
InterPro:IPR020783 InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359
SMART:SM00649 Pfam:PF03946 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR EMBL:U00006
GO:GO:0003735 GO:GO:0019843 GO:GO:0015968 GO:GO:0006415 PDB:2VHM
PDBsum:2VHM PDB:2RDO PDBsum:2RDO PDB:3EP2 PDB:3EQ3 PDB:3EQ4
PDBsum:3EP2 PDBsum:3EQ3 PDBsum:3EQ4 GO:GO:0022625 EMBL:V00339
PDB:3DEG PDBsum:3DEG EMBL:M30610 eggNOG:COG0080
HOGENOM:HOG000082123 KO:K02867 OMA:KQFNAKT Gene3D:1.10.10.250
Gene3D:3.30.1550.10 InterPro:IPR020784 PANTHER:PTHR11661
SUPFAM:SSF46906 SUPFAM:SSF54747 TIGRFAMs:TIGR01632 PDB:3J0T
PDB:3J0W PDB:3J0Y PDB:3J11 PDB:3J12 PDB:3J14 PDB:3SGF PDB:3UOS
PDBsum:3J0T PDBsum:3J0W PDBsum:3J0Y PDBsum:3J11 PDBsum:3J12
PDBsum:3J14 PDBsum:3SGF PDBsum:3UOS ProtClustDB:PRK00140
HAMAP:MF_00736_B PIR:S12572 RefSeq:NP_418410.1 RefSeq:YP_491478.1
PDB:1EG0 PDB:1P85 PDB:1P86 PDB:1VS6 PDB:1VS8 PDB:1VT2 PDB:2AW4
PDB:2AWB PDB:2GYA PDB:2GYC PDB:2I2T PDB:2I2V PDB:2J28 PDB:2QAM
PDB:2QAO PDB:2QBA PDB:2QBC PDB:2QBE PDB:2QBG PDB:2QBI PDB:2QBK
PDB:2QOV PDB:2QOX PDB:2QOZ PDB:2QP1 PDB:2VHN PDB:2WWQ PDB:2Z4L
PDB:2Z4N PDB:3DF2 PDB:3DF4 PDB:3E1B PDB:3E1D PDB:3FIK PDB:3I1N
PDB:3I1P PDB:3I1R PDB:3I1T PDB:3I20 PDB:3I22 PDB:3IZT PDB:3IZU
PDB:3J01 PDB:3J0D PDB:3J19 PDB:3KCR PDB:3OAS PDB:3OAT PDB:3OFC
PDB:3OFD PDB:3OFQ PDB:3OFR PDB:3OFZ PDB:3OG0 PDB:3ORB PDB:3R8S
PDB:3R8T PDB:487D PDB:4GAR PDB:4GAU PDBsum:1EG0 PDBsum:1P85
PDBsum:1P86 PDBsum:1VS6 PDBsum:1VS8 PDBsum:1VT2 PDBsum:2AW4
PDBsum:2AWB PDBsum:2GYA PDBsum:2GYC PDBsum:2I2T PDBsum:2I2V
PDBsum:2J28 PDBsum:2QAM PDBsum:2QAO PDBsum:2QBA PDBsum:2QBC
PDBsum:2QBE PDBsum:2QBG PDBsum:2QBI PDBsum:2QBK PDBsum:2QOV
PDBsum:2QOX PDBsum:2QOZ PDBsum:2QP1 PDBsum:2VHN PDBsum:2WWQ
PDBsum:2Z4L PDBsum:2Z4N PDBsum:3DF2 PDBsum:3DF4 PDBsum:3E1B
PDBsum:3E1D PDBsum:3FIK PDBsum:3I1N PDBsum:3I1P PDBsum:3I1R
PDBsum:3I1T PDBsum:3I20 PDBsum:3I22 PDBsum:3IZT PDBsum:3IZU
PDBsum:3J01 PDBsum:3J0D PDBsum:3J19 PDBsum:3KCR PDBsum:3OAS
PDBsum:3OAT PDBsum:3OFC PDBsum:3OFD PDBsum:3OFQ PDBsum:3OFR
PDBsum:3OFZ PDBsum:3OG0 PDBsum:3ORB PDBsum:3R8S PDBsum:3R8T
PDBsum:487D PDBsum:4GAR PDBsum:4GAU ProteinModelPortal:P0A7J7
SMR:P0A7J7 DIP:DIP-35882N IntAct:P0A7J7 MINT:MINT-1232893
PaxDb:P0A7J7 PRIDE:P0A7J7 EnsemblBacteria:EBESCT00000004171
EnsemblBacteria:EBESCT00000015475 GeneID:12930523 GeneID:948484
KEGG:ecj:Y75_p3214 KEGG:eco:b3983 PATRIC:32123487 EchoBASE:EB0865
EcoGene:EG10872 BioCyc:EcoCyc:EG10872-MONOMER
BioCyc:ECOL316407:JW3946-MONOMER EvolutionaryTrace:P0A7J7
Genevestigator:P0A7J7 Uniprot:P0A7J7
Length = 142
Score = 220 (82.5 bits), Expect = 3.6e-18, P = 3.6e-18
Identities = 47/115 (40%), Positives = 70/115 (60%)
Query: 43 ERGVNIATFCKDFNEKTKDLKEGLPLPTRIKVNPDRSYKLIIHKPPTSYYLKQAAGMAKG 102
++GVNI FCK FN KT +++GLP+P I V DRS+ + PP + LK+AAG+ G
Sbjct: 30 QQGVNIMEFCKAFNAKTDSIEKGLPIPVVITVYADRSFTFVTKTPPAAVLLKKAAGIKSG 89
Query: 103 VMKPGKEIGGKLTLKHIYEIAKIKSEDSAFECETLEYICTSVIGSARSVGIEVVD 157
KP K+ GK++ + EIA+ K+ D +E + S+ G+ARS+G+ V D
Sbjct: 90 SGKPNKDKVGKISRAQLQEIAQTKAADMTGA--DIEAMTRSIEGTARSMGLVVED 142
>SGD|S000005129 [details] [associations]
symbol:MRPL19 "Mitochondrial ribosomal protein of the large
subunit" species:4932 "Saccharomyces cerevisiae" [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA;IDA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA;IDA]
[GO:0005762 "mitochondrial large ribosomal subunit" evidence=IDA]
[GO:0032543 "mitochondrial translation" evidence=IC] [GO:0006412
"translation" evidence=IEA] InterPro:IPR000911 InterPro:IPR006519
InterPro:IPR020783 Pfam:PF00298 PROSITE:PS00359 SMART:SM00649
SGD:S000005129 Pfam:PF03946 EMBL:BK006947 GO:GO:0005762
GO:GO:0003735 GO:GO:0032543 eggNOG:COG0080 HOGENOM:HOG000082123
Gene3D:1.10.10.250 Gene3D:3.30.1550.10 InterPro:IPR020784
PANTHER:PTHR11661 SUPFAM:SSF46906 SUPFAM:SSF54747
TIGRFAMs:TIGR01632 GeneTree:ENSGT00390000003153 OMA:CKDFNEK
OrthoDB:EOG4Q8872 EMBL:Z71461 PIR:S63140 RefSeq:NP_014214.1
ProteinModelPortal:P53875 SMR:P53875 DIP:DIP-6781N IntAct:P53875
MINT:MINT-613200 STRING:P53875 PaxDb:P53875 EnsemblFungi:YNL185C
GeneID:855536 KEGG:sce:YNL185C CYGD:YNL185c NextBio:979595
Genevestigator:P53875 GermOnline:YNL185C Uniprot:P53875
Length = 158
Score = 218 (81.8 bits), Expect = 5.8e-18, P = 5.8e-18
Identities = 48/126 (38%), Positives = 73/126 (57%)
Query: 44 RGVNIATFCKDFNEKTKDLKEGLPLPTRIKVNPDRSYKLIIHKPPTSYYLKQAAGMAKGV 103
+G+ FCK+FN ++ + + G+P+P I + PDR++ + PPT Y L +A M KG
Sbjct: 32 KGIKAIDFCKEFNARSANYQPGVPVPVLITIKPDRTFTFEMKSPPTGYLLLKALKMDKGH 91
Query: 104 MKP--GKEIG-----------GKLTLKHIYEIAKIKSEDSAFECETLEYICTSVIGSARS 150
+P G +G G+L+LKH+YEIAKIK D +E I S++G A+S
Sbjct: 92 GQPNVGTMLGSAPAKGPTRALGELSLKHVYEIAKIKKSDERHSLLEMEGIVKSIVGVAKS 151
Query: 151 VGIEVV 156
+GI+VV
Sbjct: 152 MGIKVV 157
>TIGR_CMR|ECH_0956 [details] [associations]
symbol:ECH_0956 "ribosomal protein L11" species:205920
"Ehrlichia chaffeensis str. Arkansas" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0015934 "large ribosomal subunit" evidence=ISS]
InterPro:IPR000911 InterPro:IPR006519 InterPro:IPR020783
InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359 SMART:SM00649
Pfam:PF03946 EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 GO:GO:0019843 eggNOG:COG0080
HOGENOM:HOG000082123 KO:K02867 Gene3D:1.10.10.250
Gene3D:3.30.1550.10 InterPro:IPR020784 PANTHER:PTHR11661
SUPFAM:SSF46906 SUPFAM:SSF54747 TIGRFAMs:TIGR01632
ProtClustDB:PRK00140 RefSeq:YP_507744.1 ProteinModelPortal:Q2GFN9
STRING:Q2GFN9 GeneID:3927764 KEGG:ech:ECH_0956 PATRIC:20577294
OMA:KLEFMAM BioCyc:ECHA205920:GJNR-959-MONOMER Uniprot:Q2GFN9
Length = 147
Score = 211 (79.3 bits), Expect = 3.2e-17, P = 3.2e-17
Identities = 49/119 (41%), Positives = 69/119 (57%)
Query: 44 RGVNIATFCKDFNEKT----KDLKEGLPLPTRIKVNPDRSYKLIIHKPPTSYYLKQAAGM 99
RG+ + FCK+FN+ T K K G + RI + D+SY I P SY LK+AA +
Sbjct: 31 RGIPMPKFCKEFNDITSGEGKQYKVGDLVTARISIYNDKSYSFTISDSPVSYLLKKAAAI 90
Query: 100 AKGVMKPGKEIGGKLTLKHIYEIAKIKSEDSAFECETLEYICTSVIGSARSVGIEVVDK 158
KG + PGK+ GK+ + +YEIAK K D +T+E VIG+A S+GI VV++
Sbjct: 91 DKGSVNPGKDNVGKIKMSAVYEIAKRKMSD--MNADTVEAAAKMVIGTASSMGIVVVEE 147
>TIGR_CMR|CJE_0524 [details] [associations]
symbol:CJE_0524 "ribosomal protein L11" species:195099
"Campylobacter jejuni RM1221" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0042254 "ribosome biogenesis"
evidence=ISS] InterPro:IPR000911 InterPro:IPR006519
InterPro:IPR020783 InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359
SMART:SM00649 Pfam:PF03946 GO:GO:0006412 GO:GO:0005840
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0003735 GO:GO:0019843
eggNOG:COG0080 HOGENOM:HOG000082123 KO:K02867 OMA:KQFNAKT
Gene3D:1.10.10.250 Gene3D:3.30.1550.10 InterPro:IPR020784
PANTHER:PTHR11661 SUPFAM:SSF46906 SUPFAM:SSF54747
TIGRFAMs:TIGR01632 ProtClustDB:PRK00140 HAMAP:MF_00736_B
RefSeq:YP_178542.1 HSSP:P29395 ProteinModelPortal:Q5HVZ3 SMR:Q5HVZ3
STRING:Q5HVZ3 GeneID:3231285 KEGG:cjr:CJE0524 PATRIC:20042770
BioCyc:CJEJ195099:GJC0-539-MONOMER Uniprot:Q5HVZ3
Length = 141
Score = 210 (79.0 bits), Expect = 4.1e-17, P = 4.1e-17
Identities = 47/115 (40%), Positives = 67/115 (58%)
Query: 43 ERGVNIATFCKDFNEKTKDLKEGLPLPTRIKVNPDRSYKLIIHKPPTSYYLKQAAGMAKG 102
++GVNI FCK FNE+TKD+ G +P I V D+S+ I +PP + +K+AAG++KG
Sbjct: 30 QQGVNIMEFCKAFNERTKDMA-GFNIPVVITVYADKSFTFITKQPPATDLIKKAAGISKG 88
Query: 103 VMKPGKEIGGKLTLKHIYEIAKIKSEDSAFECETLEYICTSVIGSARSVGIEVVD 157
P K GKLT + EI K D + + + GSARS+G+E+VD
Sbjct: 89 TDNPLKNKVGKLTRAQVLEIVDKKIAD--LNTKDRDQAAKIIAGSARSMGVEIVD 141
>TIGR_CMR|CPS_4773 [details] [associations]
symbol:CPS_4773 "ribosomal protein L11" species:167879
"Colwellia psychrerythraea 34H" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0015934 "large ribosomal subunit" evidence=ISS]
InterPro:IPR000911 InterPro:IPR006519 InterPro:IPR020783
InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359 SMART:SM00649
Pfam:PF03946 GO:GO:0006412 GO:GO:0005840 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0003735 GO:GO:0019843
eggNOG:COG0080 HOGENOM:HOG000082123 KO:K02867 OMA:KQFNAKT
Gene3D:1.10.10.250 Gene3D:3.30.1550.10 InterPro:IPR020784
PANTHER:PTHR11661 SUPFAM:SSF46906 SUPFAM:SSF54747
TIGRFAMs:TIGR01632 ProtClustDB:PRK00140 HAMAP:MF_00736_B
HSSP:Q5SLP6 RefSeq:YP_271417.1 ProteinModelPortal:Q47UV5 SMR:Q47UV5
STRING:Q47UV5 GeneID:3521266 KEGG:cps:CPS_4773 PATRIC:21472363
BioCyc:CPSY167879:GI48-4779-MONOMER Uniprot:Q47UV5
Length = 142
Score = 209 (78.6 bits), Expect = 5.3e-17, P = 5.3e-17
Identities = 47/115 (40%), Positives = 64/115 (55%)
Query: 43 ERGVNIATFCKDFNEKTKDLKEGLPLPTRIKVNPDRSYKLIIHKPPTSYYLKQAAGMAKG 102
+ GVNI FCK FN KT L++G P+P I V DRS+ PP S+ LK+AAG+ G
Sbjct: 30 QHGVNIMEFCKAFNAKTDSLEKGAPVPVVITVYSDRSFTFETKTPPASFLLKKAAGIKSG 89
Query: 103 VMKPGKEIGGKLTLKHIYEIAKIKSEDSAFECETLEYICTSVIGSARSVGIEVVD 157
+P + G +T + EI K K D +LE ++ GSARS+G+ V D
Sbjct: 90 SGRPNTDKVGTVTTAQLEEIVKTKEPD--LTAGSLEAAVRTIAGSARSMGLVVED 142
>TIGR_CMR|CHY_2323 [details] [associations]
symbol:CHY_2323 "ribosomal protein L11" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR000911 InterPro:IPR006519
InterPro:IPR020783 InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359
SMART:SM00649 Pfam:PF03946 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 GO:GO:0019843
eggNOG:COG0080 KO:K02867 OMA:KQFNAKT Gene3D:1.10.10.250
Gene3D:3.30.1550.10 InterPro:IPR020784 PANTHER:PTHR11661
SUPFAM:SSF46906 SUPFAM:SSF54747 TIGRFAMs:TIGR01632
ProtClustDB:PRK00140 HAMAP:MF_00736_B RefSeq:YP_361132.1
HSSP:Q5SLP6 ProteinModelPortal:Q3A9Q2 SMR:Q3A9Q2 STRING:Q3A9Q2
GeneID:3726209 KEGG:chy:CHY_2323 PATRIC:21277713
HOGENOM:HOG000082124 BioCyc:CHYD246194:GJCN-2322-MONOMER
Uniprot:Q3A9Q2
Length = 141
Score = 205 (77.2 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 47/115 (40%), Positives = 68/115 (59%)
Query: 43 ERGVNIATFCKDFNEKTKDLKEGLPLPTRIKVNPDRSYKLIIHKPPTSYYLKQAAGMAKG 102
+ GVNI F K++NE+T + G+ +P I V DRS+ + PP S LK+AAG+ G
Sbjct: 30 QHGVNIMAFVKEYNERTAQ-QAGMIIPVEITVYEDRSFTFVTKTPPASDLLKKAAGIESG 88
Query: 103 VMKPGKEIGGKLTLKHIYEIAKIKSEDSAFECETLEYICTSVIGSARSVGIEVVD 157
+P K+ GK+T I EIA++K +D +E + G+ARS+GIEVVD
Sbjct: 89 SGQPNKKKVGKVTRAKIREIAELKLKD--LNANDVEAAMRMIEGTARSMGIEVVD 141
>UNIPROTKB|Q9KV34 [details] [associations]
symbol:rplK "50S ribosomal protein L11" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003735
"structural constituent of ribosome" evidence=ISS] [GO:0006412
"translation" evidence=ISS] InterPro:IPR000911 InterPro:IPR006519
InterPro:IPR020783 InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359
SMART:SM00649 Pfam:PF03946 GO:GO:0006412 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0005840 GO:GO:0003735 GO:GO:0019843
eggNOG:COG0080 KO:K02867 OMA:KQFNAKT Gene3D:1.10.10.250
Gene3D:3.30.1550.10 InterPro:IPR020784 PANTHER:PTHR11661
SUPFAM:SSF46906 SUPFAM:SSF54747 TIGRFAMs:TIGR01632
ProtClustDB:PRK00140 HAMAP:MF_00736_B PIR:B82338 RefSeq:NP_229978.1
ProteinModelPortal:Q9KV34 SMR:Q9KV34 DNASU:2615090 GeneID:2615090
KEGG:vch:VC0324 PATRIC:20079705 Uniprot:Q9KV34
Length = 142
Score = 204 (76.9 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 47/113 (41%), Positives = 65/113 (57%)
Query: 43 ERGVNIATFCKDFNEKTKDLKEGLPLPTRIKVNPDRSYKLIIHKPPTSYYLKQAAGMAKG 102
+RGVNI FCK FN +T+ L++GLP+P I V DRS+ PP S LK+AAG+ G
Sbjct: 30 QRGVNIMEFCKAFNARTESLEKGLPIPVVITVYSDRSFTFETKTPPASVLLKKAAGIKSG 89
Query: 103 VMKPGKEIGGKLTLKHIYEIAKIKSEDSAFECETLEYICTSVIGSARSVGIEV 155
+P G +T I EIA K+ D +E + S+ G+ARS+G+ V
Sbjct: 90 SARPNTAKVGTITDAQIQEIAATKAADMTGA--DIEAMKRSIAGTARSMGLVV 140
>TIGR_CMR|SO_0220 [details] [associations]
symbol:SO_0220 "ribosomal protein L11" species:211586
"Shewanella oneidensis MR-1" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR000911 InterPro:IPR006519 InterPro:IPR020783
InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359 SMART:SM00649
Pfam:PF03946 GO:GO:0006412 GO:GO:0005840 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0003735 GO:GO:0019843
eggNOG:COG0080 HOGENOM:HOG000082123 KO:K02867 OMA:KQFNAKT
Gene3D:1.10.10.250 Gene3D:3.30.1550.10 InterPro:IPR020784
PANTHER:PTHR11661 SUPFAM:SSF46906 SUPFAM:SSF54747
TIGRFAMs:TIGR01632 ProtClustDB:PRK00140 HAMAP:MF_00736_B
RefSeq:NP_715860.1 ProteinModelPortal:Q8EK78 SMR:Q8EK78
GeneID:1168103 KEGG:son:SO_0220 PATRIC:23520133 Uniprot:Q8EK78
Length = 142
Score = 204 (76.9 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 44/113 (38%), Positives = 67/113 (59%)
Query: 43 ERGVNIATFCKDFNEKTKDLKEGLPLPTRIKVNPDRSYKLIIHKPPTSYYLKQAAGMAKG 102
++GVNI FCK FN +T+ +++G+P+P I V DRS+ PP SY LK AAG+ G
Sbjct: 30 QKGVNIMEFCKAFNARTEKMEKGMPIPVVITVYSDRSFTFETKTPPASYLLKTAAGLKSG 89
Query: 103 VMKPGKEIGGKLTLKHIYEIAKIKSEDSAFECETLEYICTSVIGSARSVGIEV 155
+P + G + I EIA++K+ D +E + S+ G+ARS+G+ V
Sbjct: 90 SPRPNTQKVGTIARAKIQEIAEMKAADMTGA--DVEAMTRSIEGTARSMGLVV 140
>TIGR_CMR|VC_0324 [details] [associations]
symbol:VC_0324 "ribosomal protein L11" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR000911 InterPro:IPR006519 InterPro:IPR020783
InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359 SMART:SM00649
Pfam:PF03946 GO:GO:0006412 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0005840 GO:GO:0003735 GO:GO:0019843 eggNOG:COG0080 KO:K02867
OMA:KQFNAKT Gene3D:1.10.10.250 Gene3D:3.30.1550.10
InterPro:IPR020784 PANTHER:PTHR11661 SUPFAM:SSF46906
SUPFAM:SSF54747 TIGRFAMs:TIGR01632 ProtClustDB:PRK00140
HAMAP:MF_00736_B PIR:B82338 RefSeq:NP_229978.1
ProteinModelPortal:Q9KV34 SMR:Q9KV34 DNASU:2615090 GeneID:2615090
KEGG:vch:VC0324 PATRIC:20079705 Uniprot:Q9KV34
Length = 142
Score = 204 (76.9 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 47/113 (41%), Positives = 65/113 (57%)
Query: 43 ERGVNIATFCKDFNEKTKDLKEGLPLPTRIKVNPDRSYKLIIHKPPTSYYLKQAAGMAKG 102
+RGVNI FCK FN +T+ L++GLP+P I V DRS+ PP S LK+AAG+ G
Sbjct: 30 QRGVNIMEFCKAFNARTESLEKGLPIPVVITVYSDRSFTFETKTPPASVLLKKAAGIKSG 89
Query: 103 VMKPGKEIGGKLTLKHIYEIAKIKSEDSAFECETLEYICTSVIGSARSVGIEV 155
+P G +T I EIA K+ D +E + S+ G+ARS+G+ V
Sbjct: 90 SARPNTAKVGTITDAQIQEIAATKAADMTGA--DIEAMKRSIAGTARSMGLVV 140
>TIGR_CMR|CBU_0226 [details] [associations]
symbol:CBU_0226 "ribosomal protein L11" species:227377
"Coxiella burnetii RSA 493" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] InterPro:IPR000911 InterPro:IPR006519
InterPro:IPR020783 InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359
SMART:SM00649 Pfam:PF03946 GO:GO:0006412 GO:GO:0005840
EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0003735 GO:GO:0019843
eggNOG:COG0080 HOGENOM:HOG000082123 KO:K02867 OMA:KQFNAKT
Gene3D:1.10.10.250 Gene3D:3.30.1550.10 InterPro:IPR020784
PANTHER:PTHR11661 SUPFAM:SSF46906 SUPFAM:SSF54747
TIGRFAMs:TIGR01632 ProtClustDB:PRK00140 HAMAP:MF_00736_B
RefSeq:NP_819270.1 ProteinModelPortal:Q83ET4 SMR:Q83ET4
PRIDE:Q83ET4 GeneID:1208107 KEGG:cbu:CBU_0226 PATRIC:17929143
BioCyc:CBUR227377:GJ7S-232-MONOMER Uniprot:Q83ET4
Length = 145
Score = 200 (75.5 bits), Expect = 4.7e-16, P = 4.7e-16
Identities = 46/114 (40%), Positives = 65/114 (57%)
Query: 43 ERGVNIATFCKDFNEKTKDLKEGLPLPTRIKVNPDRSYKLIIHKPPTSYYLKQAAGMAK- 101
+ GVNI FC+ FN TK++++GLP P I V DR++ I PP S LK+ K
Sbjct: 30 QHGVNIREFCESFNTATKNIEKGLPTPVIITVYADRTFSFITKTPPASVLLKKFVLKGKS 89
Query: 102 GVMKPGKEIGGKLTLKHIYEIAKIKSEDSAFECETLEYICTSVIGSARSVGIEV 155
G +P E GK T + + EIAK+K+ D LE ++ G+ARS+GI+V
Sbjct: 90 GSARPNTEKVGKATRQQLEEIAKMKTPD--LTAADLEAAIRTIAGTARSMGIDV 141
>TIGR_CMR|GSU_2867 [details] [associations]
symbol:GSU_2867 "ribosomal protein L11" species:243231
"Geobacter sulfurreducens PCA" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0042254 "ribosome biogenesis" evidence=ISS] InterPro:IPR000911
InterPro:IPR006519 InterPro:IPR020783 Pfam:PF00298 PROSITE:PS00359
SMART:SM00649 Pfam:PF03946 GO:GO:0006412 GO:GO:0005840
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0003735 GO:GO:0019843
eggNOG:COG0080 HOGENOM:HOG000082123 KO:K02867 OMA:KQFNAKT
Gene3D:1.10.10.250 Gene3D:3.30.1550.10 InterPro:IPR020784
PANTHER:PTHR11661 SUPFAM:SSF46906 SUPFAM:SSF54747
TIGRFAMs:TIGR01632 ProtClustDB:PRK00140 HAMAP:MF_00736_B
RefSeq:NP_953909.1 ProteinModelPortal:P62434 SMR:P62434
GeneID:2686756 KEGG:gsu:GSU2867 PATRIC:22028585
BioCyc:GSUL243231:GH27-2848-MONOMER Uniprot:P62434
Length = 141
Score = 198 (74.8 bits), Expect = 7.7e-16, P = 7.7e-16
Identities = 48/115 (41%), Positives = 64/115 (55%)
Query: 43 ERGVNIATFCKDFNEKTKDLKEGLPLPTRIKVNPDRSYKLIIHKPPTSYYLKQAAGMAKG 102
+ GVNI FCK FN KT+ EG +P I V DRS+ I PP S +K+A G+ G
Sbjct: 30 QHGVNIMEFCKAFNAKTQ-ADEGTIIPVVITVYADRSFTFITKVPPMSVLIKKAVGIESG 88
Query: 103 VMKPGKEIGGKLTLKHIYEIAKIKSEDSAFECETLEYICTSVIGSARSVGIEVVD 157
P K GKLT + + EIA K D +LE +V G+ARS+G+E+V+
Sbjct: 89 SSVPNKNKVGKLTREQVREIATKKLPD--MNAASLEAAMRTVEGTARSMGVEIVN 141
>TAIR|locus:2037970 [details] [associations]
symbol:PRPL11 "plastid ribosomal protein l11"
species:3702 "Arabidopsis thaliana" [GO:0003735 "structural
constituent of ribosome" evidence=IEA;ISS] [GO:0005840 "ribosome"
evidence=IEA;ISS] [GO:0006412 "translation" evidence=IEA]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0022625 "cytosolic
large ribosomal subunit" evidence=ISS] [GO:0042254 "ribosome
biogenesis" evidence=ISS] [GO:0009941 "chloroplast envelope"
evidence=IDA] [GO:0022626 "cytosolic ribosome" evidence=IDA]
[GO:0009570 "chloroplast stroma" evidence=IDA] [GO:0016020
"membrane" evidence=IDA] [GO:0006364 "rRNA processing"
evidence=RCA] [GO:0010027 "thylakoid membrane organization"
evidence=RCA] [GO:0015995 "chlorophyll biosynthetic process"
evidence=RCA] [GO:0019288 "isopentenyl diphosphate biosynthetic
process, mevalonate-independent pathway" evidence=RCA]
InterPro:IPR000911 InterPro:IPR006519 InterPro:IPR020783
InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359 SMART:SM00649
Pfam:PF03946 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009570
GO:GO:0016020 GO:GO:0006412 GO:GO:0009941 GO:GO:0003735
GO:GO:0022626 GO:GO:0019843 EMBL:AC006424 EMBL:AF325023
EMBL:AF412105 EMBL:AF370254 EMBL:AY063070 EMBL:AY085664
IPI:IPI00524837 PIR:E86454 RefSeq:NP_174575.1 UniGene:At.1364
ProteinModelPortal:Q9MAP3 SMR:Q9MAP3 STRING:Q9MAP3 PaxDb:Q9MAP3
PRIDE:Q9MAP3 ProMEX:Q9MAP3 EnsemblPlants:AT1G32990.1 GeneID:840194
KEGG:ath:AT1G32990 GeneFarm:81 TAIR:At1g32990 eggNOG:COG0080
HOGENOM:HOG000082123 InParanoid:Q9MAP3 KO:K02867 OMA:KQFNAKT
PhylomeDB:Q9MAP3 ProtClustDB:CLSN2912775 Genevestigator:Q9MAP3
GermOnline:AT1G32990 Gene3D:1.10.10.250 Gene3D:3.30.1550.10
InterPro:IPR020784 PANTHER:PTHR11661 SUPFAM:SSF46906
SUPFAM:SSF54747 TIGRFAMs:TIGR01632 Uniprot:Q9MAP3
Length = 222
Score = 190 (71.9 bits), Expect = 5.4e-15, P = 5.4e-15
Identities = 42/112 (37%), Positives = 63/112 (56%)
Query: 44 RGVNIATFCKDFNEKTKDLKEGLPLPTRIKVNPDRSYKLIIHKPPTSYYLKQAAGMAKGV 103
+GVNI FCKD+N +T D K G +P I V D+S+ I+ PP S L +AAG+ KG
Sbjct: 100 KGVNIMAFCKDYNARTAD-KAGYIIPVEITVFDDKSFTFILKTPPASVLLLKAAGVEKGS 158
Query: 104 MKPGKEIGGKLTLKHIYEIAKIKSEDSAFECETLEYICTSVIGSARSVGIEV 155
P ++ G +T+ + IA K D C T+E + G+A ++GI++
Sbjct: 159 KDPQQDKVGVITIDQLRTIAAEKLPD--LNCTTIESAMRIIAGTAANMGIDI 208
>GENEDB_PFALCIPARUM|PF11_0113 [details] [associations]
symbol:PF11_0113 "ribosomal protein L11,
putative" species:5833 "Plasmodium falciparum" [GO:0000315
"organellar large ribosomal subunit" evidence=ISS]
InterPro:IPR000911 InterPro:IPR020783 Pfam:PF00298 SMART:SM00649
Pfam:PF03946 GO:GO:0006412 GO:GO:0003735 EMBL:AE014186
HOGENOM:HOG000082123 Gene3D:1.10.10.250 Gene3D:3.30.1550.10
InterPro:IPR020784 PANTHER:PTHR11661 SUPFAM:SSF46906
SUPFAM:SSF54747 RefSeq:XP_001347786.2 ProteinModelPortal:Q8IIQ5
EnsemblProtists:PF11_0113:mRNA GeneID:810662 KEGG:pfa:PF11_0113
EuPathDB:PlasmoDB:PF3D7_1110600 ProtClustDB:CLSZ2433013
GO:GO:0000315 Uniprot:Q8IIQ5
Length = 178
Score = 176 (67.0 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 37/130 (28%), Positives = 72/130 (55%)
Query: 45 GVNIATFCKDFNEKTKDLKEGLPLPTRIKVNPDRSYKLIIHKPPTSYYLKQAAGMAKGVM 104
G+N+ TF K+FN++TK + + +P+ ++ DR+Y+ + P +++++ A +
Sbjct: 30 GINMMTFFKEFNDRTKCIAKNVPIQVTLEPLNDRTYRFYLRTPTVVWFIRRCARVPMFSS 89
Query: 105 KPGKEIGGKLTLKHIYEIAKIKSEDSAFECETLEYICTSVIGSARSVGIEVVDKLDAEEY 164
G +TL ++ IAK K D +L+ IC +IG+ S+GI V +L+ EE
Sbjct: 90 MAKHNTVGSITLAEVFHIAKCKRMDPPLINLSLKSICKYIIGTCNSMGIRVCKELNDEEK 149
Query: 165 QQ-FLEERKI 173
++ F++ K+
Sbjct: 150 KKYFVDVNKL 159
>UNIPROTKB|Q8IIQ5 [details] [associations]
symbol:PF11_0113 "Mitochondrial ribosomal protein L11,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0000315
"organellar large ribosomal subunit" evidence=ISS]
InterPro:IPR000911 InterPro:IPR020783 Pfam:PF00298 SMART:SM00649
Pfam:PF03946 GO:GO:0006412 GO:GO:0003735 EMBL:AE014186
HOGENOM:HOG000082123 Gene3D:1.10.10.250 Gene3D:3.30.1550.10
InterPro:IPR020784 PANTHER:PTHR11661 SUPFAM:SSF46906
SUPFAM:SSF54747 RefSeq:XP_001347786.2 ProteinModelPortal:Q8IIQ5
EnsemblProtists:PF11_0113:mRNA GeneID:810662 KEGG:pfa:PF11_0113
EuPathDB:PlasmoDB:PF3D7_1110600 ProtClustDB:CLSZ2433013
GO:GO:0000315 Uniprot:Q8IIQ5
Length = 178
Score = 176 (67.0 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 37/130 (28%), Positives = 72/130 (55%)
Query: 45 GVNIATFCKDFNEKTKDLKEGLPLPTRIKVNPDRSYKLIIHKPPTSYYLKQAAGMAKGVM 104
G+N+ TF K+FN++TK + + +P+ ++ DR+Y+ + P +++++ A +
Sbjct: 30 GINMMTFFKEFNDRTKCIAKNVPIQVTLEPLNDRTYRFYLRTPTVVWFIRRCARVPMFSS 89
Query: 105 KPGKEIGGKLTLKHIYEIAKIKSEDSAFECETLEYICTSVIGSARSVGIEVVDKLDAEEY 164
G +TL ++ IAK K D +L+ IC +IG+ S+GI V +L+ EE
Sbjct: 90 MAKHNTVGSITLAEVFHIAKCKRMDPPLINLSLKSICKYIIGTCNSMGIRVCKELNDEEK 149
Query: 165 QQ-FLEERKI 173
++ F++ K+
Sbjct: 150 KKYFVDVNKL 159
>TIGR_CMR|DET_0993 [details] [associations]
symbol:DET_0993 "ribosomal protein L11" species:243164
"Dehalococcoides ethenogenes 195" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0015934 "large ribosomal subunit" evidence=ISS]
InterPro:IPR000911 InterPro:IPR006519 InterPro:IPR020783
InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359 SMART:SM00649
Pfam:PF03946 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
EMBL:CP000027 GenomeReviews:CP000027_GR GO:GO:0019843
eggNOG:COG0080 HOGENOM:HOG000082123 KO:K02867 OMA:KQFNAKT
Gene3D:1.10.10.250 Gene3D:3.30.1550.10 InterPro:IPR020784
PANTHER:PTHR11661 SUPFAM:SSF46906 SUPFAM:SSF54747
TIGRFAMs:TIGR01632 ProtClustDB:PRK00140 HAMAP:MF_00736_B
HSSP:Q5SLP6 RefSeq:YP_181716.1 ProteinModelPortal:Q3Z7T3 SMR:Q3Z7T3
STRING:Q3Z7T3 GeneID:3229743 KEGG:det:DET0993 PATRIC:21609035
BioCyc:DETH243164:GJNF-994-MONOMER Uniprot:Q3Z7T3
Length = 140
Score = 176 (67.0 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 41/114 (35%), Positives = 65/114 (57%)
Query: 43 ERGVNIATFCKDFNEKTKDLKEGLPLPTRIKVNPDRSYKLIIHKPPTSYYLKQAAGMAKG 102
+ G+NI FCK++N++T + G +P I + DRS+ I PP + LK+AAG+ G
Sbjct: 30 QHGINIMGFCKEYNDRTASMA-GTIVPAEITIYDDRSFTFITKTPPAADLLKKAAGVEAG 88
Query: 103 VMKPGKEIGGKLTLKHIYEIAKIKSED-SAFECETLEYICTSVIGSARSVGIEV 155
P K + ++ + EIA +K +D +A E E I + G+ARS+GI+V
Sbjct: 89 SGTPSKSVVAVISKGQLREIASVKMKDLNAVNIEGAERI---IEGTARSMGIKV 139
>TIGR_CMR|APH_1028 [details] [associations]
symbol:APH_1028 "ribosomal protein L11" species:212042
"Anaplasma phagocytophilum HZ" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0015934 "large ribosomal subunit" evidence=ISS]
InterPro:IPR000911 InterPro:IPR006519 InterPro:IPR020783
InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359 SMART:SM00649
Pfam:PF03946 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
EMBL:CP000235 GenomeReviews:CP000235_GR GO:GO:0019843
eggNOG:COG0080 HOGENOM:HOG000082123 KO:K02867 Gene3D:1.10.10.250
Gene3D:3.30.1550.10 InterPro:IPR020784 PANTHER:PTHR11661
SUPFAM:SSF46906 SUPFAM:SSF54747 TIGRFAMs:TIGR01632
ProtClustDB:PRK00140 OMA:FCKQYNF RefSeq:YP_505587.1
ProteinModelPortal:Q2GJ64 STRING:Q2GJ64 GeneID:3929928
KEGG:aph:APH_1028 PATRIC:20950806
BioCyc:APHA212042:GHPM-1035-MONOMER Uniprot:Q2GJ64
Length = 148
Score = 174 (66.3 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 44/118 (37%), Positives = 65/118 (55%)
Query: 44 RGVNIATFCKDFNEKTKDLKEGLP-----LPT-RIKVNPDRSYKLIIHKPPTSYYLKQAA 97
RG+ + FC++FNE T +G P L T RI V D++Y I P S+ L++AA
Sbjct: 32 RGIPMPQFCREFNEATS--AQGTPYEIGDLVTARISVYVDKTYSFTISDSPVSFLLRKAA 89
Query: 98 GMAKGVMKPGKEIGGKLTLKHIYEIAKIKSEDSAFECETLEYICTSVIGSARSVGIEV 155
G+ KG PGKE + ++ + +IA+ K D + +E VIG+ARS+GI V
Sbjct: 90 GLTKGSSAPGKESCASIKMEEVVKIAERKIAD--MNADDIEAAVKMVIGTARSMGITV 145
>UNIPROTKB|P66056 [details] [associations]
symbol:rplK "50S ribosomal protein L11" species:1773
"Mycobacterium tuberculosis" [GO:0005618 "cell wall" evidence=IDA]
[GO:0040007 "growth" evidence=IMP] InterPro:IPR000911
InterPro:IPR006519 InterPro:IPR020783 InterPro:IPR020785
Pfam:PF00298 PROSITE:PS00359 SMART:SM00649 Pfam:PF03946
GO:GO:0040007 GO:GO:0005618 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0006412 GO:GO:0005840 EMBL:BX842574
GO:GO:0003735 GO:GO:0019843 eggNOG:COG0080 HOGENOM:HOG000082123
KO:K02867 OMA:KQFNAKT Gene3D:1.10.10.250 Gene3D:3.30.1550.10
InterPro:IPR020784 PANTHER:PTHR11661 SUPFAM:SSF46906
SUPFAM:SSF54747 TIGRFAMs:TIGR01632 ProtClustDB:PRK00140
HAMAP:MF_00736_B PIR:E70613 RefSeq:NP_215154.1 RefSeq:NP_335080.1
RefSeq:YP_006513981.1 ProteinModelPortal:P66056 SMR:P66056
PRIDE:P66056 EnsemblBacteria:EBMYCT00000002861
EnsemblBacteria:EBMYCT00000069820 GeneID:13318526 GeneID:888045
GeneID:925952 KEGG:mtc:MT0669 KEGG:mtu:Rv0640 KEGG:mtv:RVBD_0640
PATRIC:18123193 TubercuList:Rv0640 Uniprot:P66056
Length = 142
Score = 173 (66.0 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 41/113 (36%), Positives = 61/113 (53%)
Query: 43 ERGVNIATFCKDFNEKTKDLKEGLPLPTRIKVNPDRSYKLIIHKPPTSYYLKQAAGMAKG 102
+ GVNI FCK +N T++ + G +P I V DRS+ + PP + L +AAG+AKG
Sbjct: 32 QHGVNIMEFCKAYNAATEN-QRGNVIPVEITVYEDRSFTFTLKTPPAAKLLLKAAGVAKG 90
Query: 103 VMKPGKEIGGKLTLKHIYEIAKIKSEDSAFECETLEYICTSVIGSARSVGIEV 155
+P K K+T + EIA+ K D ++ + G+ARS+GI V
Sbjct: 91 SAEPHKTKVAKVTWDQVREIAETKKTD--LNANDVDAAAKIIAGTARSMGITV 141
>TIGR_CMR|BA_0097 [details] [associations]
symbol:BA_0097 "ribosomal protein L11" species:198094
"Bacillus anthracis str. Ames" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR000911 InterPro:IPR006519 InterPro:IPR020783
InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359 SMART:SM00649
Pfam:PF03946 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
GO:GO:0019843 eggNOG:COG0080 HOGENOM:HOG000082123 KO:K02867
OMA:KQFNAKT Gene3D:1.10.10.250 Gene3D:3.30.1550.10
InterPro:IPR020784 PANTHER:PTHR11661 SUPFAM:SSF46906
SUPFAM:SSF54747 TIGRFAMs:TIGR01632 RefSeq:NP_842665.1
RefSeq:YP_016700.2 RefSeq:YP_026383.1 ProteinModelPortal:Q81VU3
SMR:Q81VU3 DNASU:1086044 EnsemblBacteria:EBBACT00000008112
EnsemblBacteria:EBBACT00000017784 EnsemblBacteria:EBBACT00000023843
GeneID:1086044 GeneID:2814888 GeneID:2852743 KEGG:ban:BA_0097
KEGG:bar:GBAA_0097 KEGG:bat:BAS0097 ProtClustDB:PRK00140
BioCyc:BANT260799:GJAJ-108-MONOMER
BioCyc:BANT261594:GJ7F-110-MONOMER HAMAP:MF_00736_B Uniprot:Q81VU3
Length = 141
Score = 173 (66.0 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 42/115 (36%), Positives = 61/115 (53%)
Query: 43 ERGVNIATFCKDFNEKTKDLKEGLPLPTRIKVNPDRSYKLIIHKPPTSYYLKQAAGMAKG 102
+ GVNI FCK+FN +T D + GL +P I V DRS+ I PP + LK+ AG+ G
Sbjct: 30 QAGVNIMGFCKEFNARTAD-QAGLIIPVEITVFEDRSFTFITKTPPAAVLLKKVAGIESG 88
Query: 103 VMKPGKEIGGKLTLKHIYEIAKIKSEDSAFECETLEYICTSVIGSARSVGIEVVD 157
+P + + + EIA+ K D ++E V G+ARS+GI + D
Sbjct: 89 SGEPNRNKVATVKRDKVREIAETKMPD--LNAASVEAAMRMVEGTARSMGIVIED 141
>TAIR|locus:2153162 [details] [associations]
symbol:AT5G51610 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412 "translation"
evidence=IEA;ISS] [GO:0009507 "chloroplast" evidence=ISM]
[GO:0042254 "ribosome biogenesis" evidence=ISS] [GO:0006354
"DNA-dependent transcription, elongation" evidence=RCA]
InterPro:IPR000911 InterPro:IPR020783 InterPro:IPR020785
Pfam:PF00298 PROSITE:PS00359 SMART:SM00649 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
EMBL:AB018109 eggNOG:COG0080 HOGENOM:HOG000082123 KO:K02867
Gene3D:1.10.10.250 PANTHER:PTHR11661 SUPFAM:SSF46906
IPI:IPI00529938 RefSeq:NP_199974.1 UniGene:At.55491 HSSP:P56210
ProteinModelPortal:Q9FHM3 SMR:Q9FHM3 STRING:Q9FHM3 PaxDb:Q9FHM3
PRIDE:Q9FHM3 EnsemblPlants:AT5G51610.1 GeneID:835235
KEGG:ath:AT5G51610 TAIR:At5g51610 InParanoid:Q9FHM3 OMA:NCTTIVS
PhylomeDB:Q9FHM3 Genevestigator:Q9FHM3 Uniprot:Q9FHM3
Length = 182
Score = 128 (50.1 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 28/81 (34%), Positives = 50/81 (61%)
Query: 76 PDRSYKLIIHKPPTSYYLKQAAGMAKGVMKPGKEIG-GKLTLKHIYEIAKIKSEDSAFEC 134
PD+S+ I+ PPTS+ L +AAG+ KG P K+I G +T+ + +IA++K + C
Sbjct: 91 PDQSFTFILKTPPTSFLLLKAAGVKKGSKDP-KQIKVGMITIDQVRKIAEVKLPE--LNC 147
Query: 135 ETLEYICTSVIGSARSVGIEV 155
T+ ++ G+A ++GI++
Sbjct: 148 TTIVSTMRTIAGTAGNMGIDI 168
>UNIPROTKB|E9PQB6 [details] [associations]
symbol:MRPL11 "39S ribosomal protein L11, mitochondrial"
species:9606 "Homo sapiens" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR000911
SMART:SM00649 Pfam:PF03946 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 EMBL:AP002748 Gene3D:3.30.1550.10 InterPro:IPR020784
PANTHER:PTHR11661 SUPFAM:SSF54747 HGNC:HGNC:14042 ChiTaRS:MRPL11
IPI:IPI00983181 ProteinModelPortal:E9PQB6 SMR:E9PQB6
Ensembl:ENST00000534488 ArrayExpress:E9PQB6 Bgee:E9PQB6
Uniprot:E9PQB6
Length = 75
Score = 127 (49.8 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 22/32 (68%), Positives = 29/32 (90%)
Query: 43 ERGVNIATFCKDFNEKTKDLKEGLPLPTRIKV 74
+RGV+I FCK+FNE+TKD+KEG+PLPT+I V
Sbjct: 41 QRGVSINQFCKEFNERTKDIKEGIPLPTKILV 72
>UNIPROTKB|H0YCD5 [details] [associations]
symbol:MRPL11 "39S ribosomal protein L11, mitochondrial"
species:9606 "Homo sapiens" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR020783
Pfam:PF00298 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
EMBL:AP002748 Gene3D:1.10.10.250 HGNC:HGNC:14042 ChiTaRS:MRPL11
Ensembl:ENST00000528272 Bgee:H0YCD5 Uniprot:H0YCD5
Length = 63
Score = 87 (35.7 bits), Expect = 0.00063, P = 0.00063
Identities = 20/38 (52%), Positives = 27/38 (71%)
Query: 121 EIAKIKSEDSAFECET--LEYICTSVIGSARSVGIEVV 156
EIA+IK++D AF + L + S+IGSARS+GI VV
Sbjct: 1 EIARIKAQDEAFALQDVPLSSVVRSIIGSARSLGIRVV 38
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.135 0.376 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 195 165 0.00093 107 3 11 22 0.40 32
30 0.45 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 36
No. of states in DFA: 559 (59 KB)
Total size of DFA: 130 KB (2083 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 15.32u 0.13s 15.45t Elapsed: 00:00:01
Total cpu time: 15.32u 0.13s 15.45t Elapsed: 00:00:01
Start: Thu Aug 15 15:31:33 2013 End: Thu Aug 15 15:31:34 2013