Your job contains 1 sequence.
>psy3902
TPAGYFTHCVIDEAGQATEPEVLVPISLLHRDNGHVVLAGDPLQLGPTVFSKLGQQLELS
TPSGYFTHCVIDEAGQATEPEVLVPISLLHRDNGHVVLAGDPLQLGPTVFSKLGQQLELR
ISLLERLTGRFLYSRDMSRFYATGGYDPRLVTRLVNNYRTMPEILKISSDLFYDASLVPH
N
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy3902
(181 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
RGD|1304735 - symbol:Mov10l1 "Mov10l1, Moloney leukemia v... 313 1.9e-27 1
UNIPROTKB|E1BZJ8 - symbol:MOV10L1 "Uncharacterized protei... 318 3.4e-27 1
FB|FBgn0041164 - symbol:armi "armitage" species:7227 "Dro... 313 1.3e-26 1
MGI|MGI:1891384 - symbol:Mov10l1 "Moloney leukemia virus ... 312 1.5e-26 1
UNIPROTKB|F1RXR7 - symbol:MOV10L1 "Uncharacterized protei... 302 1.8e-25 1
UNIPROTKB|G3X7G5 - symbol:MOV10L1 "Uncharacterized protei... 299 3.7e-25 1
UNIPROTKB|Q9BXT6 - symbol:MOV10L1 "Putative helicase Mov1... 296 7.7e-25 1
ZFIN|ZDB-GENE-061013-333 - symbol:zgc:154086 "zgc:154086"... 275 1.2e-22 1
ZFIN|ZDB-GENE-030131-9089 - symbol:mov10b.1 "Moloney leuk... 247 1.0e-19 1
ZFIN|ZDB-GENE-091230-8 - symbol:mov10a "Moloney leukemia ... 244 2.1e-19 1
UNIPROTKB|F1NNW1 - symbol:MOV10 "Putative helicase MOV-10... 236 9.0e-19 1
TAIR|locus:2200996 - symbol:SDE3 "SILENCING DEFECTIVE" sp... 234 2.4e-18 1
RGD|1598327 - symbol:Mov10 "Moloney leukemia virus 10" sp... 227 1.4e-17 1
UNIPROTKB|Q5ZKD7 - symbol:MOV10 "Putative helicase MOV-10... 226 1.6e-17 1
UNIPROTKB|J9P7Z9 - symbol:MOV10 "Uncharacterized protein"... 226 1.7e-17 1
UNIPROTKB|F1P7T4 - symbol:MOV10 "Uncharacterized protein"... 226 1.7e-17 1
UNIPROTKB|Q9HCE1 - symbol:MOV10 "Putative helicase MOV-10... 224 2.8e-17 1
UNIPROTKB|Q0V8H6 - symbol:MOV10 "Putative helicase MOV-10... 222 4.6e-17 1
UNIPROTKB|F1SBP9 - symbol:MOV10 "Uncharacterized protein"... 219 9.7e-17 1
MGI|MGI:97054 - symbol:Mov10 "Moloney leukemia virus 10" ... 217 1.6e-16 1
ZFIN|ZDB-GENE-060526-371 - symbol:mov10b.2 "Moloney leuke... 215 2.6e-16 1
FB|FBgn0036451 - symbol:CG9425 species:7227 "Drosophila m... 192 4.8e-14 2
FB|FBgn0034187 - symbol:CG6967 species:7227 "Drosophila m... 192 5.6e-14 1
UNIPROTKB|F1NPN9 - symbol:LOC100857488 "Uncharacterized p... 183 1.5e-12 1
UNIPROTKB|I6L9H4 - symbol:HELZ "Probable helicase with zi... 179 2.2e-12 1
UNIPROTKB|E2R8C1 - symbol:HELZ "Uncharacterized protein" ... 180 3.2e-12 1
UNIPROTKB|F1RSM3 - symbol:HELZ "Uncharacterized protein" ... 180 3.2e-12 1
MGI|MGI:1925705 - symbol:Helz "helicase with zinc finger ... 180 3.2e-12 1
RGD|1307049 - symbol:Helz "helicase with zinc finger" spe... 180 3.2e-12 1
ZFIN|ZDB-GENE-040426-2419 - symbol:helz "helicase with zi... 179 3.8e-12 1
UNIPROTKB|F1MKC7 - symbol:Bt.110099 "Uncharacterized prot... 179 4.0e-12 1
UNIPROTKB|P42694 - symbol:HELZ "Probable helicase with zi... 179 4.0e-12 1
UNIPROTKB|J3QS41 - symbol:HELZ "Probable helicase with zi... 179 4.0e-12 1
FB|FBgn0033889 - symbol:CG6701 species:7227 "Drosophila m... 171 1.7e-11 1
UNIPROTKB|E1C0Z0 - symbol:HELZ2 "Uncharacterized protein"... 133 1.2e-10 2
UNIPROTKB|E2RBM4 - symbol:PRIC285 "Uncharacterized protei... 129 7.4e-10 2
RGD|1306056 - symbol:Pric285 "peroxisomal proliferator-ac... 134 1.3e-09 2
ZFIN|ZDB-GENE-070912-617 - symbol:si:dkey-97a13.6 "si:dke... 149 1.6e-09 2
UNIPROTKB|Q9BYK8 - symbol:HELZ2 "Helicase with zinc finge... 129 3.0e-09 2
UNIPROTKB|F1RMM8 - symbol:LOC100519780 "Uncharacterized p... 119 1.2e-08 2
UNIPROTKB|E1C4T7 - symbol:Gga.18015 "Uncharacterized prot... 136 2.0e-07 1
DICTYBASE|DDB_G0289529 - symbol:DDB_G0289529 species:4468... 131 3.4e-07 2
DICTYBASE|DDB_G0268660 - symbol:DDB_G0268660 "DNA2/NAM7 h... 129 6.1e-06 1
RGD|1565575 - symbol:Setx "senataxin" species:10116 "Ratt... 123 6.1e-06 1
UNIPROTKB|F1PHA4 - symbol:SETX "Uncharacterized protein" ... 128 1.0e-05 1
DICTYBASE|DDB_G0268924 - symbol:DDB_G0268924 "Helicase SE... 125 2.2e-05 1
CGD|CAL0003666 - symbol:NAM7 species:5476 "Candida albica... 116 2.4e-05 2
UNIPROTKB|Q5A507 - symbol:NAM7 "Putative uncharacterized ... 116 2.4e-05 2
UNIPROTKB|E1BAS6 - symbol:SETX "Uncharacterized protein" ... 125 3.4e-05 1
FB|FBgn0035842 - symbol:CG7504 species:7227 "Drosophila m... 122 5.9e-05 1
DICTYBASE|DDB_G0288923 - symbol:upf1 "regulator of nonsen... 121 6.2e-05 1
ZFIN|ZDB-GENE-040426-2836 - symbol:upf1 "upf1 regulator o... 113 6.4e-05 2
UNIPROTKB|E1C0J4 - symbol:UPF1 "Uncharacterized protein" ... 113 6.6e-05 2
MGI|MGI:107995 - symbol:Upf1 "UPF1 regulator of nonsense ... 113 6.7e-05 2
UNIPROTKB|E1BEK9 - symbol:UPF1 "Uncharacterized protein" ... 113 6.7e-05 2
UNIPROTKB|E1C0J3 - symbol:UPF1 "Uncharacterized protein" ... 113 6.7e-05 2
UNIPROTKB|Q92900 - symbol:UPF1 "Regulator of nonsense tra... 113 6.7e-05 2
UNIPROTKB|E2RL81 - symbol:UPF1 "Uncharacterized protein" ... 113 6.7e-05 2
UNIPROTKB|D4AEB3 - symbol:Setx "Protein Setx" species:101... 123 7.1e-05 1
UNIPROTKB|F1S0U6 - symbol:SETX "Uncharacterized protein" ... 123 7.1e-05 1
MGI|MGI:2443480 - symbol:Setx "senataxin" species:10090 "... 122 9.7e-05 1
UNIPROTKB|Q7Z333 - symbol:SETX "Probable helicase senatax... 122 9.8e-05 1
DICTYBASE|DDB_G0268662 - symbol:DDB_G0268662 "DNA2/NAM7 h... 121 0.00013 1
DICTYBASE|DDB_G0268914 - symbol:DDB_G0268914 species:4468... 125 0.00017 2
WB|WBGene00004880 - symbol:smg-2 species:6239 "Caenorhabd... 106 0.00023 2
TAIR|locus:2171007 - symbol:LBA1 "LOW-LEVEL BETA-AMYLASE ... 116 0.00028 1
FB|FBgn0030354 - symbol:Upf1 "Upf1" species:7227 "Drosoph... 115 0.00037 1
DICTYBASE|DDB_G0285243 - symbol:DDB_G0285243 "putative sp... 117 0.00037 1
ZFIN|ZDB-GENE-070402-1 - symbol:setx "senataxin" species:... 117 0.00043 1
POMBASE|SPCC737.07c - symbol:SPCC737.07c "DNA polymerase ... 94 0.00063 2
POMBASE|SPAC16C9.06c - symbol:upf1 "ATP-dependent RNA hel... 111 0.00089 1
>RGD|1304735 [details] [associations]
symbol:Mov10l1 "Mov10l1, Moloney leukemia virus 10-like 1,
homolog (mouse)" species:10116 "Rattus norvegicus" [GO:0007281
"germ cell development" evidence=ISO] [GO:0007283 "spermatogenesis"
evidence=ISO] [GO:0007517 "muscle organ development" evidence=ISO]
[GO:0008283 "cell proliferation" evidence=ISO] [GO:0045786
"negative regulation of cell cycle" evidence=ISO] RGD:1304735
GeneTree:ENSGT00550000074391 InterPro:IPR026125
PANTHER:PTHR10887:SF6 IPI:IPI00560261 Ensembl:ENSRNOT00000050620
ArrayExpress:F1M357 Uniprot:F1M357
Length = 550
Score = 313 (115.2 bits), Expect = 1.9e-27, P = 1.9e-27
Identities = 68/159 (42%), Positives = 92/159 (57%)
Query: 19 EPEVLVPISLLHRDNGHVVLAGDPLQLGPTVFSKLGQQLELSTPSGYFTHCVIDEAGQAT 78
E ++ I RD G + ++ T S G ++ GYFTH +DEAGQA+
Sbjct: 199 EETIIEAIKPYCRD-GEDIWRASRFRIIITTCSSAGLFYQIGVRVGYFTHVFVDEAGQAS 257
Query: 79 EPEVLVPISLLHRDNGHVVLAGDPLQLGPTVFSKLGQQLELRISLLERLTGRFLYSRDMS 138
EPE L+P+ L+ NG +VLAGDP+QLGP + S+L L +S+LERL R Y RD +
Sbjct: 258 EPECLIPLGLISDINGQIVLAGDPMQLGPVIKSRLAMAYGLNVSMLERLMSRPAYLRDEN 317
Query: 139 RFYATGGYDPRLVTRLVNNYRTMPEILKISSDLFYDASL 177
F A G Y+P LVT+LV NYR+ +L + S LFY L
Sbjct: 318 AFGACGAYNPLLVTKLVKNYRSHSALLALPSRLFYHREL 356
Score = 177 (67.4 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 32/57 (56%), Positives = 42/57 (73%)
Query: 4 GYFTHCVIDEAGQATEPEVLVPISLLHRDNGHVVLAGDPLQLGPTVFSKLGQQLELS 60
GYFTH +DEAGQA+EPE L+P+ L+ NG +VLAGDP+QLGP + S+L L+
Sbjct: 243 GYFTHVFVDEAGQASEPECLIPLGLISDINGQIVLAGDPMQLGPVIKSRLAMAYGLN 299
>UNIPROTKB|E1BZJ8 [details] [associations]
symbol:MOV10L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007281 "germ cell development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
GeneTree:ENSGT00550000074391 OMA:NMSGVTL InterPro:IPR026125
PANTHER:PTHR10887:SF6 EMBL:AADN02050039 EMBL:AADN02050037
EMBL:AADN02050038 IPI:IPI00585215 Ensembl:ENSGALT00000013959
ArrayExpress:E1BZJ8 Uniprot:E1BZJ8
Length = 1192
Score = 318 (117.0 bits), Expect = 3.4e-27, P = 3.4e-27
Identities = 64/130 (49%), Positives = 82/130 (63%)
Query: 48 TVFSKLGQQLELSTPSGYFTHCVIDEAGQATEPEVLVPISLLHRDNGHVVLAGDPLQLGP 107
T S G + T G+FTH ++DEAGQA+EPE L+PI L+ NG +VL GDP QLGP
Sbjct: 869 TTCSSAGMFYQTGTRLGHFTHVILDEAGQASEPESLIPIGLISEVNGQIVLVGDPKQLGP 928
Query: 108 TVFSKLGQQLELRISLLERLTGRFLYSRDMSRFYATGGYDPRLVTRLVNNYRTMPEILKI 167
+ S++ L ISLLERL R +Y RD F A G Y+P L+T+LVNNYR+ +L +
Sbjct: 929 LIKSRIAVAFGLNISLLERLISRDMYLRDEDAFSADGSYNPLLITKLVNNYRSHSALLAL 988
Query: 168 SSDLFYDASL 177
S LFY L
Sbjct: 989 PSKLFYHKEL 998
Score = 168 (64.2 bits), Expect = 3.4e-11, P = 3.4e-11
Identities = 30/53 (56%), Positives = 40/53 (75%)
Query: 1 TPAGYFTHCVIDEAGQATEPEVLVPISLLHRDNGHVVLAGDPLQLGPTVFSKL 53
T G+FTH ++DEAGQA+EPE L+PI L+ NG +VL GDP QLGP + S++
Sbjct: 882 TRLGHFTHVILDEAGQASEPESLIPIGLISEVNGQIVLVGDPKQLGPLIKSRI 934
>FB|FBgn0041164 [details] [associations]
symbol:armi "armitage" species:7227 "Drosophila melanogaster"
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=ISS;IMP] [GO:0007319 "negative
regulation of oskar mRNA translation" evidence=IMP] [GO:0000578
"embryonic axis specification" evidence=NAS;IMP] [GO:0016325
"oocyte microtubule cytoskeleton organization" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0007317 "regulation of
pole plasm oskar mRNA localization" evidence=IMP] [GO:0016246 "RNA
interference" evidence=IMP] [GO:0003678 "DNA helicase activity"
evidence=NAS] [GO:0030425 "dendrite" evidence=IDA] [GO:0043025
"neuronal cell body" evidence=IDA] [GO:0007616 "long-term memory"
evidence=IMP] [GO:0030424 "axon" evidence=IDA] [GO:0045202
"synapse" evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0046843 "dorsal appendage
formation" evidence=IMP] [GO:0007318 "pole plasm protein
localization" evidence=IMP] [GO:0070725 "Yb body" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] GO:GO:0005524
GO:GO:0005737 EMBL:AE014296 GO:GO:0016246 GO:GO:0000184
GO:GO:0030424 GO:GO:0043025 GO:GO:0030425 GO:GO:0007616
GO:GO:0045202 GO:GO:0007318 eggNOG:COG1112 EMBL:AY598469
RefSeq:NP_001014556.1 RefSeq:NP_647816.2 ProteinModelPortal:Q6J5K9
SMR:Q6J5K9 IntAct:Q6J5K9 STRING:Q6J5K9 PaxDb:Q6J5K9 GeneID:38427
KEGG:dme:Dmel_CG11513 UCSC:CG11513-RA CTD:38427 FlyBase:FBgn0041164
InParanoid:Q6J5K9 OMA:ITISTCT OrthoDB:EOG4DZ094 PhylomeDB:Q6J5K9
GenomeRNAi:38427 NextBio:808602 Bgee:Q6J5K9 GermOnline:CG11513
GO:GO:0070725 GO:GO:0003678 GO:GO:0046843 GO:GO:0031023
InterPro:IPR026122 PANTHER:PTHR10887:SF17 Uniprot:Q6J5K9
Length = 1274
Score = 313 (115.2 bits), Expect = 1.3e-26, P = 1.3e-26
Identities = 61/127 (48%), Positives = 84/127 (66%)
Query: 53 LGQQLELSTPSGYFTHCVIDEAGQATEPEVLVPISLLHRDNGHVVLAGDPLQLGPTVFSK 112
LG L+L P+G+FTH + DEAGQ TEPE +VPI +L + VVL+GDP QL V S+
Sbjct: 929 LGNFLQLGFPAGHFTHVLFDEAGQCTEPETMVPIVMLTKKRSQVVLSGDPRQLQSIVTSR 988
Query: 113 LGQQLELRISLLERLTGRFLYSRDMSRFYATGGYDPRLVTRLVNNYRTMPEILKISSDLF 172
+ ++ IS LERL R Y +D+ RF + GY+P ++T+L+ NYR +P I+ I S LF
Sbjct: 989 IASKMGFSISFLERLLERSPYRKDLQRFPESSGYNPLVLTKLLYNYRALPSIMSIYSRLF 1048
Query: 173 YDASLVP 179
YD L+P
Sbjct: 1049 YDDELIP 1055
Score = 156 (60.0 bits), Expect = 6.9e-10, P = 6.9e-10
Identities = 30/59 (50%), Positives = 40/59 (67%)
Query: 2 PAGYFTHCVIDEAGQATEPEVLVPISLLHRDNGHVVLAGDPLQLGPTVFSKLGQQLELS 60
PAG+FTH + DEAGQ TEPE +VPI +L + VVL+GDP QL V S++ ++ S
Sbjct: 938 PAGHFTHVLFDEAGQCTEPETMVPIVMLTKKRSQVVLSGDPRQLQSIVTSRIASKMGFS 996
>MGI|MGI:1891384 [details] [associations]
symbol:Mov10l1 "Moloney leukemia virus 10-like 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007517 "muscle organ development" evidence=IDA]
[GO:0008283 "cell proliferation" evidence=IDA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0045786 "negative regulation
of cell cycle" evidence=IDA] MGI:MGI:1891384 GO:GO:0005524
GO:GO:0005737 GO:GO:0008283 GO:GO:0007283 GO:GO:0007517
GO:GO:0004386 eggNOG:COG1112 GO:GO:0045786 CTD:54456
HOVERGEN:HBG052382 KO:K13983 InterPro:IPR026125
PANTHER:PTHR10887:SF6 EMBL:AF285587 EMBL:AF340211 EMBL:AY303754
EMBL:AK084786 IPI:IPI00118099 IPI:IPI00227971 IPI:IPI00453884
RefSeq:NP_112550.2 UniGene:Mm.358791 ProteinModelPortal:Q99MV5
SMR:Q99MV5 STRING:Q99MV5 PhosphoSite:Q99MV5 PaxDb:Q99MV5
PRIDE:Q99MV5 DNASU:83456 GeneID:83456 KEGG:mmu:83456
HOGENOM:HOG000015363 InParanoid:Q99MV5 NextBio:350584
CleanEx:MM_MOV10L1 Genevestigator:Q99MV5
GermOnline:ENSMUSG00000015365 Uniprot:Q99MV5
Length = 1187
Score = 312 (114.9 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 63/130 (48%), Positives = 82/130 (63%)
Query: 48 TVFSKLGQQLELSTPSGYFTHCVIDEAGQATEPEVLVPISLLHRDNGHVVLAGDPLQLGP 107
T S G ++ GYFTH +DEAGQA+EPE L+P+ L+ NG +VLAGDP+QLGP
Sbjct: 864 TTCSSAGLFYQIGVRVGYFTHVFVDEAGQASEPECLIPLGLISDINGQIVLAGDPMQLGP 923
Query: 108 TVFSKLGQQLELRISLLERLTGRFLYSRDMSRFYATGGYDPRLVTRLVNNYRTMPEILKI 167
+ S+L L +S+LERL R Y RD + F A G Y+P LVT+LV NYR+ +L +
Sbjct: 924 VIKSRLAMAYGLNVSMLERLMSRPAYLRDENAFGACGAYNPLLVTKLVKNYRSHSALLAL 983
Query: 168 SSDLFYDASL 177
S LFY L
Sbjct: 984 PSRLFYHREL 993
Score = 177 (67.4 bits), Expect = 3.7e-12, P = 3.7e-12
Identities = 32/57 (56%), Positives = 42/57 (73%)
Query: 4 GYFTHCVIDEAGQATEPEVLVPISLLHRDNGHVVLAGDPLQLGPTVFSKLGQQLELS 60
GYFTH +DEAGQA+EPE L+P+ L+ NG +VLAGDP+QLGP + S+L L+
Sbjct: 880 GYFTHVFVDEAGQASEPECLIPLGLISDINGQIVLAGDPMQLGPVIKSRLAMAYGLN 936
>UNIPROTKB|F1RXR7 [details] [associations]
symbol:MOV10L1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007283 "spermatogenesis" evidence=IEA] [GO:0007281
"germ cell development" evidence=IEA] GO:GO:0007283 GO:GO:0007281
GeneTree:ENSGT00550000074391 OMA:NMSGVTL InterPro:IPR026125
PANTHER:PTHR10887:SF6 EMBL:BX321913 Ensembl:ENSSSCT00000001066
Uniprot:F1RXR7
Length = 1211
Score = 302 (111.4 bits), Expect = 1.8e-25, P = 1.8e-25
Identities = 67/159 (42%), Positives = 91/159 (57%)
Query: 19 EPEVLVPISLLHRDNGHVVLAGDPLQLGPTVFSKLGQQLELSTPSGYFTHCVIDEAGQAT 78
E +L I RD G V ++ T S G ++ G+FTH +DEAGQA+
Sbjct: 832 EETILDAIKPYCRD-GEDVWRASRFRVVITTCSSAGLFYQIGLRVGHFTHVFVDEAGQAS 890
Query: 79 EPEVLVPISLLHRDNGHVVLAGDPLQLGPTVFSKLGQQLELRISLLERLTGRFLYSRDMS 138
EPE L+P+ L+ +G ++LAGDP+QLGP + S+L L +S+LERL R Y RD
Sbjct: 891 EPECLIPLGLISDIDGQIILAGDPMQLGPVIKSRLAMAYGLNVSMLERLMARPAYLRDED 950
Query: 139 RFYATGGYDPRLVTRLVNNYRTMPEILKISSDLFYDASL 177
F A G Y+P LVT+LV NYR+ +L + S LFY L
Sbjct: 951 AFGACGAYNPLLVTKLVKNYRSHSALLALPSRLFYHREL 989
Score = 166 (63.5 bits), Expect = 5.6e-11, P = 5.6e-11
Identities = 29/57 (50%), Positives = 42/57 (73%)
Query: 4 GYFTHCVIDEAGQATEPEVLVPISLLHRDNGHVVLAGDPLQLGPTVFSKLGQQLELS 60
G+FTH +DEAGQA+EPE L+P+ L+ +G ++LAGDP+QLGP + S+L L+
Sbjct: 876 GHFTHVFVDEAGQASEPECLIPLGLISDIDGQIILAGDPMQLGPVIKSRLAMAYGLN 932
>UNIPROTKB|G3X7G5 [details] [associations]
symbol:MOV10L1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007283 "spermatogenesis" evidence=IEA] [GO:0007281
"germ cell development" evidence=IEA] GO:GO:0007283 GO:GO:0007281
GeneTree:ENSGT00550000074391 OMA:NMSGVTL InterPro:IPR026125
PANTHER:PTHR10887:SF6 EMBL:DAAA02015125 EMBL:DAAA02015122
EMBL:DAAA02015123 EMBL:DAAA02015124 Ensembl:ENSBTAT00000027109
Uniprot:G3X7G5
Length = 1214
Score = 299 (110.3 bits), Expect = 3.7e-25, P = 3.7e-25
Identities = 61/130 (46%), Positives = 81/130 (62%)
Query: 48 TVFSKLGQQLELSTPSGYFTHCVIDEAGQATEPEVLVPISLLHRDNGHVVLAGDPLQLGP 107
T S G ++ G+FTH +DEAGQA+EPE L+P+ L+ +G +VLAGDP+QLGP
Sbjct: 865 TTCSSAGLFYQIGLRVGHFTHVFVDEAGQASEPECLIPLGLVSDVSGQIVLAGDPMQLGP 924
Query: 108 TVFSKLGQQLELRISLLERLTGRFLYSRDMSRFYATGGYDPRLVTRLVNNYRTMPEILKI 167
+ S+L L +S+LERL R Y RD F A G Y+P LVT+LV NYR+ +L +
Sbjct: 925 VIKSRLAMAYGLNVSMLERLMSRPAYLRDEDAFGACGAYNPLLVTKLVKNYRSHSALLAL 984
Query: 168 SSDLFYDASL 177
S LFY L
Sbjct: 985 PSRLFYHREL 994
Score = 166 (63.5 bits), Expect = 5.6e-11, P = 5.6e-11
Identities = 30/57 (52%), Positives = 42/57 (73%)
Query: 4 GYFTHCVIDEAGQATEPEVLVPISLLHRDNGHVVLAGDPLQLGPTVFSKLGQQLELS 60
G+FTH +DEAGQA+EPE L+P+ L+ +G +VLAGDP+QLGP + S+L L+
Sbjct: 881 GHFTHVFVDEAGQASEPECLIPLGLVSDVSGQIVLAGDPMQLGPVIKSRLAMAYGLN 937
>UNIPROTKB|Q9BXT6 [details] [associations]
symbol:MOV10L1 "Putative helicase Mov10l1" species:9606
"Homo sapiens" [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=NAS] [GO:0007283 "spermatogenesis" evidence=IEP]
[GO:0005524 "ATP binding" evidence=TAS] [GO:0000287 "magnesium ion
binding" evidence=TAS] [GO:0003723 "RNA binding" evidence=TAS]
[GO:0007281 "germ cell development" evidence=IEP] [GO:0005622
"intracellular" evidence=IC] GO:GO:0007275 GO:GO:0005524
GO:GO:0000287 GO:GO:0007283 GO:GO:0003723 GO:GO:0005622
GO:GO:0007281 eggNOG:COG1112 GO:GO:0004004 EMBL:AL022328
EMBL:AF285604 EMBL:AK000033 EMBL:AK090740 EMBL:CR456466
EMBL:AL034546 EMBL:BC150137 EMBL:BC152539 EMBL:AL133068
IPI:IPI00005638 IPI:IPI00178391 IPI:IPI00215671 IPI:IPI00853536
PIR:T42668 RefSeq:NP_001157576.1 RefSeq:NP_001157577.1
RefSeq:NP_001157578.1 RefSeq:NP_061868.1 UniGene:Hs.62880
ProteinModelPortal:Q9BXT6 SMR:Q9BXT6 STRING:Q9BXT6
PhosphoSite:Q9BXT6 DMDM:22095856 PaxDb:Q9BXT6 PeptideAtlas:Q9BXT6
PRIDE:Q9BXT6 DNASU:54456 Ensembl:ENST00000262794
Ensembl:ENST00000354853 Ensembl:ENST00000395843
Ensembl:ENST00000395852 Ensembl:ENST00000395858
Ensembl:ENST00000545383 GeneID:54456 KEGG:hsa:54456 UCSC:uc003bjj.3
UCSC:uc003bjl.3 UCSC:uc003bjm.1 CTD:54456 GeneCards:GC22P050528
HGNC:HGNC:7201 HPA:HPA019034 MIM:605794 neXtProt:NX_Q9BXT6
PharmGKB:PA30909 HOVERGEN:HBG052382 InParanoid:Q9BXT6 KO:K13983
OMA:NMSGVTL OrthoDB:EOG49GKFV PhylomeDB:Q9BXT6 GenomeRNAi:54456
NextBio:56697 ArrayExpress:Q9BXT6 Bgee:Q9BXT6 CleanEx:HS_MOV10L1
Genevestigator:Q9BXT6 GermOnline:ENSG00000073146 InterPro:IPR026125
PANTHER:PTHR10887:SF6 Uniprot:Q9BXT6
Length = 1211
Score = 296 (109.3 bits), Expect = 7.7e-25, P = 7.7e-25
Identities = 60/130 (46%), Positives = 81/130 (62%)
Query: 48 TVFSKLGQQLELSTPSGYFTHCVIDEAGQATEPEVLVPISLLHRDNGHVVLAGDPLQLGP 107
T S G ++ G+FTH +DEAGQA+EPE L+P+ L+ +G +VLAGDP+QLGP
Sbjct: 862 TTCSSSGLFYQIGVRVGHFTHVFVDEAGQASEPECLIPLGLMSDISGQIVLAGDPMQLGP 921
Query: 108 TVFSKLGQQLELRISLLERLTGRFLYSRDMSRFYATGGYDPRLVTRLVNNYRTMPEILKI 167
+ S+L L +S LERL R Y RD + F A G ++P LVT+LV NYR+ +L +
Sbjct: 922 VIKSRLAMAYGLNVSFLERLMSRPAYQRDENAFGACGAHNPLLVTKLVKNYRSHEALLML 981
Query: 168 SSDLFYDASL 177
S LFY L
Sbjct: 982 PSRLFYHREL 991
Score = 167 (63.8 bits), Expect = 4.4e-11, P = 4.4e-11
Identities = 30/57 (52%), Positives = 42/57 (73%)
Query: 4 GYFTHCVIDEAGQATEPEVLVPISLLHRDNGHVVLAGDPLQLGPTVFSKLGQQLELS 60
G+FTH +DEAGQA+EPE L+P+ L+ +G +VLAGDP+QLGP + S+L L+
Sbjct: 878 GHFTHVFVDEAGQASEPECLIPLGLMSDISGQIVLAGDPMQLGPVIKSRLAMAYGLN 934
>ZFIN|ZDB-GENE-061013-333 [details] [associations]
symbol:zgc:154086 "zgc:154086" species:7955 "Danio
rerio" [GO:0005575 "cellular_component" evidence=ND]
ZFIN:ZDB-GENE-061013-333 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 PROSITE:PS51192 InterPro:IPR025223 Pfam:PF14444
HOVERGEN:HBG052382 KO:K13983 InterPro:IPR026125
PANTHER:PTHR10887:SF6 HOGENOM:HOG000015363 EMBL:BC124807
IPI:IPI00611882 RefSeq:NP_001070795.1 UniGene:Dr.40096
ProteinModelPortal:Q08BA5 GeneID:768184 KEGG:dre:768184
NextBio:20918499 Uniprot:Q08BA5
Length = 1106
Score = 275 (101.9 bits), Expect = 1.2e-22, P = 1.2e-22
Identities = 60/127 (47%), Positives = 78/127 (61%)
Query: 51 SKLGQQLELSTPSGYFTHCVIDEAGQATEPEVLVPISLLHRDNGHVVLAGDPLQLGPTVF 110
S G ++ G+FTH +DEAGQATEPE L+P+SLL +G +VLAGDP QLGP V
Sbjct: 793 SSAGMFYQIGLRVGHFTHVFVDEAGQATEPETLIPLSLLSETSGQIVLAGDPKQLGPVVK 852
Query: 111 SKLGQQLELRISLLERLTGRFLYSRDMSRFYATGGYDPRLVTRLVNNYRTMPEILKISSD 170
S+L L +SLLERL G LY+ G++P LVT+L+ NYR+ +L + S
Sbjct: 853 SRLASVFGLGVSLLERLMGNSLYA------CGERGFNPLLVTKLLYNYRSHEALLDLPSR 906
Query: 171 LFYDASL 177
LFY L
Sbjct: 907 LFYAGEL 913
Score = 178 (67.7 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 33/50 (66%), Positives = 40/50 (80%)
Query: 4 GYFTHCVIDEAGQATEPEVLVPISLLHRDNGHVVLAGDPLQLGPTVFSKL 53
G+FTH +DEAGQATEPE L+P+SLL +G +VLAGDP QLGP V S+L
Sbjct: 806 GHFTHVFVDEAGQATEPETLIPLSLLSETSGQIVLAGDPKQLGPVVKSRL 855
>ZFIN|ZDB-GENE-030131-9089 [details] [associations]
symbol:mov10b.1 "Moloney leukemia virus 10,
homolog, b.1" species:7955 "Danio rerio" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing
body" evidence=ISS] [GO:0035279 "mRNA cleavage involved in gene
silencing by miRNA" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR003593
SMART:SM00382 ZFIN:ZDB-GENE-030131-9089 GO:GO:0005524 GO:GO:0003723
GO:GO:0004386 GO:GO:0000932 GO:GO:0035279 eggNOG:COG1112
InterPro:IPR026122 PANTHER:PTHR10887:SF17
GeneTree:ENSGT00550000074391 EMBL:BX323059 EMBL:BC171375
IPI:IPI00801311 RefSeq:NP_001037807.2 UniGene:Dr.74181
ProteinModelPortal:Q1LXK4 STRING:Q1LXK4 Ensembl:ENSDART00000086946
GeneID:556024 KEGG:dre:556024 CTD:556024 HOGENOM:HOG000239755
InParanoid:Q1LXK4 OMA:NLVGECY OrthoDB:EOG4SXNC4 NextBio:20881283
Bgee:Q1LXK4 Uniprot:Q1LXK4
Length = 1013
Score = 247 (92.0 bits), Expect = 1.0e-19, P = 1.0e-19
Identities = 54/118 (45%), Positives = 77/118 (65%)
Query: 62 PSGYFTHCVIDEAGQATEPEVLVPIS-LLHRDNGHVVLAGDPLQLGPTVFSKLGQQLELR 120
P G+F+H +DEAG A EPE+++ ++ LL+ + G +VLAGDP QLGP + S + L
Sbjct: 662 PVGHFSHIFVDEAGHAVEPEIVISVAGLLNAETGQLVLAGDPKQLGPILRSPFAIKYGLG 721
Query: 121 ISLLERL-TGRFLYSRDMSRFYATGGYDPRLVTRLVNNYRTMPEILKISSDLFYDASL 177
+SLLERL T LY + + G+D R VT+L+ NYR+ P ILK+ ++LFYD L
Sbjct: 722 LSLLERLMTQNELYQKGDT------GFDNRYVTKLLQNYRSHPSILKVPNELFYDNEL 773
Score = 143 (55.4 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 26/51 (50%), Positives = 38/51 (74%)
Query: 2 PAGYFTHCVIDEAGQATEPEVLVPIS-LLHRDNGHVVLAGDPLQLGPTVFS 51
P G+F+H +DEAG A EPE+++ ++ LL+ + G +VLAGDP QLGP + S
Sbjct: 662 PVGHFSHIFVDEAGHAVEPEIVISVAGLLNAETGQLVLAGDPKQLGPILRS 712
>ZFIN|ZDB-GENE-091230-8 [details] [associations]
symbol:mov10a "Moloney leukemia virus 10, homolog, a"
species:7955 "Danio rerio" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 SMART:SM00382 ZFIN:ZDB-GENE-091230-8
GO:GO:0005524 GO:GO:0017111 InterPro:IPR026122
PANTHER:PTHR10887:SF17 GeneTree:ENSGT00550000074391 EMBL:CU469362
IPI:IPI00481619 RefSeq:XP_002662576.2 UniGene:Dr.155704
Ensembl:ENSDART00000064826 GeneID:566858 KEGG:dre:566858 CTD:566858
NextBio:20888414 Bgee:E7FAV9 Uniprot:E7FAV9
Length = 1001
Score = 244 (91.0 bits), Expect = 2.1e-19, P = 2.1e-19
Identities = 59/116 (50%), Positives = 72/116 (62%)
Query: 64 GYFTHCVIDEAGQATEPEVLVPIS-LLHRDNGHVVLAGDPLQLGPTVFSKLGQQLELRIS 122
G+FTH IDEAGQA EPE ++ I+ LL G +VLAGDP QLGP + S L Q L S
Sbjct: 655 GHFTHIFIDEAGQAVEPECIIGIAGLLDPLKGQLVLAGDPQQLGPVLRSPLAQLHGLGQS 714
Query: 123 LLERLTGR-FLYSRDMSRFYATGGYDPRLVTRLVNNYRTMPEILKISSDLFYDASL 177
LLERL R LY + YD R VT+L+ NYR+ P ILKI ++LFY+ L
Sbjct: 715 LLERLMKRNALYQKSQDD---NSKYDSRFVTKLLRNYRSHPAILKIPNELFYENEL 767
Score = 143 (55.4 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 31/53 (58%), Positives = 37/53 (69%)
Query: 4 GYFTHCVIDEAGQATEPEVLVPIS-LLHRDNGHVVLAGDPLQLGPTVFSKLGQ 55
G+FTH IDEAGQA EPE ++ I+ LL G +VLAGDP QLGP + S L Q
Sbjct: 655 GHFTHIFIDEAGQAVEPECIIGIAGLLDPLKGQLVLAGDPQQLGPVLRSPLAQ 707
>UNIPROTKB|F1NNW1 [details] [associations]
symbol:MOV10 "Putative helicase MOV-10" species:9031
"Gallus gallus" [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] [GO:0035279 "mRNA cleavage involved in gene silencing
by miRNA" evidence=IEA] GO:GO:0000932 GO:GO:0035279
InterPro:IPR026122 PANTHER:PTHR10887:SF17
GeneTree:ENSGT00550000074391 OMA:VRFFKLD IPI:IPI00594294
EMBL:AADN02045008 Ensembl:ENSGALT00000002368 Uniprot:F1NNW1
Length = 735
Score = 236 (88.1 bits), Expect = 9.0e-19, P = 9.0e-19
Identities = 61/145 (42%), Positives = 85/145 (58%)
Query: 42 PLQLGPTVFSKLGQQLELSTPSGYFTHCVIDEAGQATEPEVLVPIS-LL-------HRDN 93
P ++ T G+ + + P GYF+H IDE G A EPE +V I+ LL +R+
Sbjct: 376 PYRILITTLVTAGRLVSANFPPGYFSHVFIDECGHAVEPESVVAIAGLLTTMDPDTNRNG 435
Query: 94 GHVVLAGDPLQLGPTVFSKLGQQLELRISLLERLT-GRFLYSRDMSRFYATGGYDPRLVT 152
G +VLAGDP QLGP + S L Q L SLLERL LY++ + GY+P+ VT
Sbjct: 436 GQLVLAGDPQQLGPVLRSPLAAQHGLGTSLLERLMLHNALYAK------SDEGYNPQFVT 489
Query: 153 RLVNNYRTMPEILKISSDLFYDASL 177
+L+ NYR+ ILK+ ++LFYD+ L
Sbjct: 490 KLLWNYRSHKAILKVPNELFYDSEL 514
Score = 137 (53.3 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 34/68 (50%), Positives = 41/68 (60%)
Query: 2 PAGYFTHCVIDEAGQATEPEVLVPIS-LL-------HRDNGHVVLAGDPLQLGPTVFSKL 53
P GYF+H IDE G A EPE +V I+ LL +R+ G +VLAGDP QLGP + S L
Sbjct: 396 PPGYFSHVFIDECGHAVEPESVVAIAGLLTTMDPDTNRNGGQLVLAGDPQQLGPVLRSPL 455
Query: 54 GQQLELST 61
Q L T
Sbjct: 456 AAQHGLGT 463
>TAIR|locus:2200996 [details] [associations]
symbol:SDE3 "SILENCING DEFECTIVE" species:3702
"Arabidopsis thaliana" [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0009616
"virus induced gene silencing" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0035194 "posttranscriptional gene
silencing by RNA" evidence=IMP] InterPro:IPR026127 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0005737
eggNOG:COG1112 EMBL:AC005106 GO:GO:0003724 GO:GO:0035194
GO:GO:0009616 HOGENOM:HOG000239755 EMBL:AF339908 EMBL:AK117698
IPI:IPI00521883 PIR:C86189 RefSeq:NP_172037.1 UniGene:At.15329
UniGene:At.42398 ProteinModelPortal:Q8GYD9 SMR:Q8GYD9 STRING:Q8GYD9
PaxDb:Q8GYD9 PRIDE:Q8GYD9 EnsemblPlants:AT1G05460.1 GeneID:837047
KEGG:ath:AT1G05460 GeneFarm:2423 TAIR:At1g05460 InParanoid:Q8GYD9
OMA:DEREGNN PhylomeDB:Q8GYD9 ProtClustDB:CLSN2682016
Genevestigator:Q8GYD9 GermOnline:AT1G05460 PANTHER:PTHR10887:SF165
Uniprot:Q8GYD9
Length = 1002
Score = 234 (87.4 bits), Expect = 2.4e-18, P = 2.4e-18
Identities = 56/115 (48%), Positives = 71/115 (61%)
Query: 64 GYFTHCVIDEAGQATEPEVLVPISLLHRDNGHVVLAGDPLQLGPTVFSKLGQQLELRISL 123
G+FTH ++DEAGQA+EPE ++ +S L VVLAGDP QLGP ++S+ + L L S
Sbjct: 537 GHFTHILLDEAGQASEPENMIAVSNLCLTETVVVLAGDPRQLGPVIYSRDAESLGLGKSY 596
Query: 124 LERLTGRFLYSRDMSRFYATGGYDPRLVTRLVNNYRTMPEILKISSDLFYDASLV 178
LERL + D +Y G D VT+LV NYR PEIL + S LFYD LV
Sbjct: 597 LERL-----FECD---YYCEG--DENYVTKLVKNYRCHPEILDLPSKLFYDGELV 641
Score = 146 (56.5 bits), Expect = 6.0e-09, P = 6.0e-09
Identities = 29/56 (51%), Positives = 40/56 (71%)
Query: 4 GYFTHCVIDEAGQATEPEVLVPISLLHRDNGHVVLAGDPLQLGPTVFSKLGQQLEL 59
G+FTH ++DEAGQA+EPE ++ +S L VVLAGDP QLGP ++S+ + L L
Sbjct: 537 GHFTHILLDEAGQASEPENMIAVSNLCLTETVVVLAGDPRQLGPVIYSRDAESLGL 592
>RGD|1598327 [details] [associations]
symbol:Mov10 "Moloney leukemia virus 10" species:10116 "Rattus
norvegicus" [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0035279 "mRNA cleavage involved in gene silencing
by miRNA" evidence=IEA;ISO] InterPro:IPR003593 SMART:SM00382
RGD:1598327 GO:GO:0005524 GO:GO:0017111 GO:GO:0000932 GO:GO:0035279
InterPro:IPR026122 PANTHER:PTHR10887:SF17
GeneTree:ENSGT00550000074391 EMBL:CH474015 OrthoDB:EOG4SXNC4
CTD:4343 IPI:IPI00192859 RefSeq:NP_001101181.1 UniGene:Rn.3508
Ensembl:ENSRNOT00000018061 GeneID:310756 KEGG:rno:310756
UCSC:RGD:1598327 NextBio:662562 Uniprot:D3ZUC2
Length = 1004
Score = 227 (85.0 bits), Expect = 1.4e-17, P = 1.4e-17
Identities = 57/123 (46%), Positives = 70/123 (56%)
Query: 62 PSGYFTHCVIDEAGQATEPEVLVPISLLH------RDNGHVVLAGDPLQLGPTVFSKLGQ 115
P +FTH IDEAG EPE LV I+ L G +VLAGDP QLGP + S L Q
Sbjct: 636 PIDHFTHIFIDEAGHCMEPESLVAIAGLMDVKETGNPGGQLVLAGDPRQLGPVLRSPLAQ 695
Query: 116 QLELRISLLERL-TGRFLYSRDMSRFYATGGYDPRLVTRLVNNYRTMPEILKISSDLFYD 174
+ L SLLERL T LY + GYDP+ +T+L+ NYR+ P IL I + L+YD
Sbjct: 696 KHGLGYSLLERLLTYNSLYKK------GPNGYDPQFITKLLRNYRSHPTILDIPNQLYYD 749
Query: 175 ASL 177
L
Sbjct: 750 GEL 752
Score = 127 (49.8 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 41/113 (36%), Positives = 53/113 (46%)
Query: 2 PAGYFTHCVIDEAGQATEPEVLVPISLLH------RDNGHVVLAGDPLQLGPTVFSKLGQ 55
P +FTH IDEAG EPE LV I+ L G +VLAGDP QLGP + S L Q
Sbjct: 636 PIDHFTHIFIDEAGHCMEPESLVAIAGLMDVKETGNPGGQLVLAGDPRQLGPVLRSPLAQ 695
Query: 56 Q--LELSTPSGYFTHCVIDEAG-QATEPEVLVPISLLHRDNGHVVLAGDPLQL 105
+ L S T+ + + G +P+ + LL H + P QL
Sbjct: 696 KHGLGYSLLERLLTYNSLYKKGPNGYDPQFIT--KLLRNYRSHPTILDIPNQL 746
>UNIPROTKB|Q5ZKD7 [details] [associations]
symbol:MOV10 "Putative helicase MOV-10" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0035279 "mRNA cleavage involved in gene silencing
by miRNA" evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing
body" evidence=ISS] GO:GO:0005524 GO:GO:0003723 GO:GO:0004386
GO:GO:0000932 GO:GO:0035279 eggNOG:COG1112 InterPro:IPR026122
PANTHER:PTHR10887:SF17 HOGENOM:HOG000239755 OrthoDB:EOG4SXNC4
CTD:4343 EMBL:AJ720147 IPI:IPI00594294 RefSeq:NP_001012861.1
UniGene:Gga.1182 ProteinModelPortal:Q5ZKD7 STRING:Q5ZKD7
PRIDE:Q5ZKD7 GeneID:419872 KEGG:gga:419872 InParanoid:Q5ZKD7
NextBio:20822865 Uniprot:Q5ZKD7
Length = 967
Score = 226 (84.6 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 60/145 (41%), Positives = 83/145 (57%)
Query: 42 PLQLGPTVFSKLGQQLELSTPSGYFTHCVIDEAGQATEPEVLVPIS-LL-------HRDN 93
P ++ T G+ + + P GYF+H IDE G A EPE +V I+ LL + +
Sbjct: 608 PYRILITTLVTAGRLVSANFPPGYFSHVFIDECGHAVEPESVVAIAGLLTTMDPDTNPNG 667
Query: 94 GHVVLAGDPLQLGPTVFSKLGQQLELRISLLERLT-GRFLYSRDMSRFYATGGYDPRLVT 152
G +VLAGDP QLGP S L Q L SLLERL LY++ + GY+P+ VT
Sbjct: 668 GQLVLAGDPQQLGPVPRSPLAAQHGLGTSLLERLMLHNALYAK------SDEGYNPQFVT 721
Query: 153 RLVNNYRTMPEILKISSDLFYDASL 177
+L+ NYR+ ILK+ ++LFYD+ L
Sbjct: 722 KLLWNYRSHKAILKVPNELFYDSEL 746
Score = 127 (49.8 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 33/68 (48%), Positives = 39/68 (57%)
Query: 2 PAGYFTHCVIDEAGQATEPEVLVPIS-LL-------HRDNGHVVLAGDPLQLGPTVFSKL 53
P GYF+H IDE G A EPE +V I+ LL + + G +VLAGDP QLGP S L
Sbjct: 628 PPGYFSHVFIDECGHAVEPESVVAIAGLLTTMDPDTNPNGGQLVLAGDPQQLGPVPRSPL 687
Query: 54 GQQLELST 61
Q L T
Sbjct: 688 AAQHGLGT 695
>UNIPROTKB|J9P7Z9 [details] [associations]
symbol:MOV10 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 SMART:SM00382 GO:GO:0005524 GO:GO:0017111
InterPro:IPR026122 PANTHER:PTHR10887:SF17
GeneTree:ENSGT00550000074391 EMBL:AAEX03011080 EMBL:AAEX03011081
Ensembl:ENSCAFT00000044224 Uniprot:J9P7Z9
Length = 983
Score = 226 (84.6 bits), Expect = 1.7e-17, P = 1.7e-17
Identities = 57/123 (46%), Positives = 74/123 (60%)
Query: 62 PSGYFTHCVIDEAGQATEPEVLVPISLL----HRDN--GHVVLAGDPLQLGPTVFSKLGQ 115
P +FTH IDEAG + EPE LV I+ L DN G +VLAGDP QLGP + S L Q
Sbjct: 615 PIDHFTHIFIDEAGHSMEPESLVAIAGLMEVKETDNPGGQLVLAGDPRQLGPVLRSPLTQ 674
Query: 116 QLELRISLLERL-TGRFLYSRDMSRFYATGGYDPRLVTRLVNNYRTMPEILKISSDLFYD 174
+ L SLLERL T LY + + GY+P+ +T+L+ NYR+ P IL I + L+Y+
Sbjct: 675 KHGLGYSLLERLLTYNALYKK------GSNGYNPQFITKLLRNYRSHPTILDIPNQLYYE 728
Query: 175 ASL 177
L
Sbjct: 729 GEL 731
Score = 133 (51.9 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 43/113 (38%), Positives = 55/113 (48%)
Query: 2 PAGYFTHCVIDEAGQATEPEVLVPISLL----HRDN--GHVVLAGDPLQLGPTVFSKLGQ 55
P +FTH IDEAG + EPE LV I+ L DN G +VLAGDP QLGP + S L Q
Sbjct: 615 PIDHFTHIFIDEAGHSMEPESLVAIAGLMEVKETDNPGGQLVLAGDPRQLGPVLRSPLTQ 674
Query: 56 Q--LELSTPSGYFTHCVIDEAGQ-ATEPEVLVPISLLHRDNGHVVLAGDPLQL 105
+ L S T+ + + G P+ + LL H + P QL
Sbjct: 675 KHGLGYSLLERLLTYNALYKKGSNGYNPQFIT--KLLRNYRSHPTILDIPNQL 725
>UNIPROTKB|F1P7T4 [details] [associations]
symbol:MOV10 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0035279 "mRNA cleavage involved in gene
silencing by miRNA" evidence=IEA] [GO:0000932 "cytoplasmic mRNA
processing body" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 GO:GO:0000932 GO:GO:0035279 InterPro:IPR026122
PANTHER:PTHR10887:SF17 GeneTree:ENSGT00550000074391 CTD:4343
OMA:VRFFKLD EMBL:AAEX03011080 EMBL:AAEX03011081 RefSeq:XP_540337.3
Ensembl:ENSCAFT00000021339 GeneID:483219 KEGG:cfa:483219
Uniprot:F1P7T4
Length = 1003
Score = 226 (84.6 bits), Expect = 1.7e-17, P = 1.7e-17
Identities = 57/123 (46%), Positives = 74/123 (60%)
Query: 62 PSGYFTHCVIDEAGQATEPEVLVPISLL----HRDN--GHVVLAGDPLQLGPTVFSKLGQ 115
P +FTH IDEAG + EPE LV I+ L DN G +VLAGDP QLGP + S L Q
Sbjct: 635 PIDHFTHIFIDEAGHSMEPESLVAIAGLMEVKETDNPGGQLVLAGDPRQLGPVLRSPLTQ 694
Query: 116 QLELRISLLERL-TGRFLYSRDMSRFYATGGYDPRLVTRLVNNYRTMPEILKISSDLFYD 174
+ L SLLERL T LY + + GY+P+ +T+L+ NYR+ P IL I + L+Y+
Sbjct: 695 KHGLGYSLLERLLTYNALYKK------GSNGYNPQFITKLLRNYRSHPTILDIPNQLYYE 748
Query: 175 ASL 177
L
Sbjct: 749 GEL 751
Score = 133 (51.9 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 43/113 (38%), Positives = 55/113 (48%)
Query: 2 PAGYFTHCVIDEAGQATEPEVLVPISLL----HRDN--GHVVLAGDPLQLGPTVFSKLGQ 55
P +FTH IDEAG + EPE LV I+ L DN G +VLAGDP QLGP + S L Q
Sbjct: 635 PIDHFTHIFIDEAGHSMEPESLVAIAGLMEVKETDNPGGQLVLAGDPRQLGPVLRSPLTQ 694
Query: 56 Q--LELSTPSGYFTHCVIDEAGQ-ATEPEVLVPISLLHRDNGHVVLAGDPLQL 105
+ L S T+ + + G P+ + LL H + P QL
Sbjct: 695 KHGLGYSLLERLLTYNALYKKGSNGYNPQFIT--KLLRNYRSHPTILDIPNQL 745
>UNIPROTKB|Q9HCE1 [details] [associations]
symbol:MOV10 "Putative helicase MOV-10" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IDA] [GO:0035279 "mRNA cleavage involved in gene silencing
by miRNA" evidence=IDA] [GO:0005829 "cytosol" evidence=TAS]
[GO:0007219 "Notch signaling pathway" evidence=TAS] GO:GO:0005829
GO:GO:0005524 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0006355 GO:GO:0007219 GO:GO:0006351
GO:GO:0003723 GO:GO:0004386 GO:GO:0000932 GO:GO:0035279
eggNOG:COG1112 InterPro:IPR026122 PANTHER:PTHR10887:SF17
EMBL:AL603832 HOGENOM:HOG000239755 OrthoDB:EOG4SXNC4 CTD:4343
OMA:VRFFKLD EMBL:AB046851 EMBL:AK074174 EMBL:AL833353 EMBL:BC002548
EMBL:BC004499 EMBL:BC009312 IPI:IPI00444452 IPI:IPI00444454
IPI:IPI00929442 RefSeq:NP_001123551.1 RefSeq:NP_066014.1
UniGene:Hs.514941 ProteinModelPortal:Q9HCE1 SMR:Q9HCE1
DIP:DIP-44158N IntAct:Q9HCE1 STRING:Q9HCE1 PhosphoSite:Q9HCE1
DMDM:24638063 PaxDb:Q9HCE1 PRIDE:Q9HCE1 DNASU:4343
Ensembl:ENST00000357443 Ensembl:ENST00000369645
Ensembl:ENST00000413052 Ensembl:ENST00000544796 GeneID:4343
KEGG:hsa:4343 UCSC:uc001eck.3 GeneCards:GC01P113215 HGNC:HGNC:7200
MIM:610742 neXtProt:NX_Q9HCE1 PharmGKB:PA30908 HOVERGEN:HBG052500
InParanoid:Q9HCE1 PhylomeDB:Q9HCE1 ChiTaRS:MOV10 GenomeRNAi:4343
NextBio:17098 ArrayExpress:Q9HCE1 Bgee:Q9HCE1 CleanEx:HS_MOV10
Genevestigator:Q9HCE1 GermOnline:ENSG00000155363 Uniprot:Q9HCE1
Length = 1003
Score = 224 (83.9 bits), Expect = 2.8e-17, P = 2.8e-17
Identities = 58/137 (42%), Positives = 74/137 (54%)
Query: 48 TVFSKLGQQLELSTPSGYFTHCVIDEAGQATEPEVLVPISLLHR------DNGHVVLAGD 101
T G+ + P +FTH IDEAG EPE LV I+ L G +VLAGD
Sbjct: 621 TTLITAGRLVSAQFPIDHFTHIFIDEAGHCMEPESLVAIAGLMEVKETGDPGGQLVLAGD 680
Query: 102 PLQLGPTVFSKLGQQLELRISLLERL-TGRFLYSRDMSRFYATGGYDPRLVTRLVNNYRT 160
P QLGP + S L Q+ L SLLERL T LY + GYDP+ +T+L+ NYR+
Sbjct: 681 PRQLGPVLRSPLTQKHGLGYSLLERLLTYNSLYKK------GPDGYDPQFITKLLRNYRS 734
Query: 161 MPEILKISSDLFYDASL 177
P IL I + L+Y+ L
Sbjct: 735 HPTILDIPNQLYYEGEL 751
Score = 125 (49.1 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 42/113 (37%), Positives = 54/113 (47%)
Query: 2 PAGYFTHCVIDEAGQATEPEVLVPISLLHR-----D-NGHVVLAGDPLQLGPTVFSKLGQ 55
P +FTH IDEAG EPE LV I+ L D G +VLAGDP QLGP + S L Q
Sbjct: 635 PIDHFTHIFIDEAGHCMEPESLVAIAGLMEVKETGDPGGQLVLAGDPRQLGPVLRSPLTQ 694
Query: 56 Q--LELSTPSGYFTHCVIDEAG-QATEPEVLVPISLLHRDNGHVVLAGDPLQL 105
+ L S T+ + + G +P+ + LL H + P QL
Sbjct: 695 KHGLGYSLLERLLTYNSLYKKGPDGYDPQFIT--KLLRNYRSHPTILDIPNQL 745
>UNIPROTKB|Q0V8H6 [details] [associations]
symbol:MOV10 "Putative helicase MOV-10" species:9913 "Bos
taurus" [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0035279 "mRNA cleavage involved in gene silencing
by miRNA" evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] GO:GO:0005524 GO:GO:0003723 GO:GO:0004386
GO:GO:0000932 GO:GO:0035279 eggNOG:COG1112 InterPro:IPR026122
PANTHER:PTHR10887:SF17 GeneTree:ENSGT00550000074391
HOGENOM:HOG000239755 OrthoDB:EOG4SXNC4 EMBL:BT026242 EMBL:BC148151
IPI:IPI00691419 RefSeq:NP_001069307.1 UniGene:Bt.2939
ProteinModelPortal:Q0V8H6 STRING:Q0V8H6 Ensembl:ENSBTAT00000018997
GeneID:523206 KEGG:bta:523206 CTD:4343 InParanoid:Q0V8H6
OMA:VRFFKLD NextBio:20873687 Uniprot:Q0V8H6
Length = 1003
Score = 222 (83.2 bits), Expect = 4.6e-17, P = 4.6e-17
Identities = 57/123 (46%), Positives = 72/123 (58%)
Query: 62 PSGYFTHCVIDEAGQATEPEVLVPISLL----HRDN--GHVVLAGDPLQLGPTVFSKLGQ 115
P +FTH IDEAG A EPE LV I+ L DN G +VLAGDP QLGP + L Q
Sbjct: 635 PIDHFTHIFIDEAGHAMEPESLVAIAGLMEVKEADNPGGQLVLAGDPRQLGPVLRCPLTQ 694
Query: 116 QLELRISLLERL-TGRFLYSRDMSRFYATGGYDPRLVTRLVNNYRTMPEILKISSDLFYD 174
+ L SLLERL T LY + GY+P+ +T+L+ NYR+ P IL + + L+YD
Sbjct: 695 KHGLGYSLLERLLTFNALYKK------GPDGYNPQFITKLLRNYRSHPTILDVPNRLYYD 748
Query: 175 ASL 177
L
Sbjct: 749 GEL 751
Score = 126 (49.4 bits), Expect = 8.2e-06, P = 8.2e-06
Identities = 32/61 (52%), Positives = 37/61 (60%)
Query: 2 PAGYFTHCVIDEAGQATEPEVLVPISLL----HRDN--GHVVLAGDPLQLGPTVFSKLGQ 55
P +FTH IDEAG A EPE LV I+ L DN G +VLAGDP QLGP + L Q
Sbjct: 635 PIDHFTHIFIDEAGHAMEPESLVAIAGLMEVKEADNPGGQLVLAGDPRQLGPVLRCPLTQ 694
Query: 56 Q 56
+
Sbjct: 695 K 695
>UNIPROTKB|F1SBP9 [details] [associations]
symbol:MOV10 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0035279 "mRNA cleavage involved in gene silencing by
miRNA" evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] GO:GO:0000932 GO:GO:0035279 InterPro:IPR026122
PANTHER:PTHR10887:SF17 GeneTree:ENSGT00550000074391 CTD:4343
OMA:VRFFKLD EMBL:CU861480 RefSeq:XP_003481536.1 UniGene:Ssc.19573
Ensembl:ENSSSCT00000007422 GeneID:100521086 KEGG:ssc:100521086
Uniprot:F1SBP9
Length = 1001
Score = 219 (82.2 bits), Expect = 9.7e-17, P = 9.7e-17
Identities = 57/123 (46%), Positives = 73/123 (59%)
Query: 62 PSGYFTHCVIDEAGQATEPEVLVPIS-LLH---RDN--GHVVLAGDPLQLGPTVFSKLGQ 115
P +FTH IDEAG + EPE LV I+ LL DN G +VLAGDP QLGP + L Q
Sbjct: 635 PIDHFTHIFIDEAGHSMEPESLVAIAGLLEVKEADNPGGQLVLAGDPRQLGPVLRCPLTQ 694
Query: 116 QLELRISLLERL-TGRFLYSRDMSRFYATGGYDPRLVTRLVNNYRTMPEILKISSDLFYD 174
+ L SLLERL T LY + GY+P+ +T+L+ NYR+ P IL I + L+Y+
Sbjct: 695 KHGLGYSLLERLLTYNALYKK------GPDGYNPQFITKLLRNYRSHPTILDIPNQLYYE 748
Query: 175 ASL 177
L
Sbjct: 749 GEL 751
Score = 129 (50.5 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 43/113 (38%), Positives = 55/113 (48%)
Query: 2 PAGYFTHCVIDEAGQATEPEVLVPIS-LLH---RDN--GHVVLAGDPLQLGPTVFSKLGQ 55
P +FTH IDEAG + EPE LV I+ LL DN G +VLAGDP QLGP + L Q
Sbjct: 635 PIDHFTHIFIDEAGHSMEPESLVAIAGLLEVKEADNPGGQLVLAGDPRQLGPVLRCPLTQ 694
Query: 56 Q--LELSTPSGYFTHCVIDEAG-QATEPEVLVPISLLHRDNGHVVLAGDPLQL 105
+ L S T+ + + G P+ + LL H + P QL
Sbjct: 695 KHGLGYSLLERLLTYNALYKKGPDGYNPQFIT--KLLRNYRSHPTILDIPNQL 745
>MGI|MGI:97054 [details] [associations]
symbol:Mov10 "Moloney leukemia virus 10" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000932 "cytoplasmic mRNA processing body" evidence=ISO]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0031047 "gene silencing by RNA"
evidence=IEA] [GO:0035279 "mRNA cleavage involved in gene silencing
by miRNA" evidence=ISO] InterPro:IPR003593 SMART:SM00382
MGI:MGI:97054 GO:GO:0005524 GO:GO:0003723 GO:GO:0004386
GO:GO:0000932 GO:GO:0035279 eggNOG:COG1112 InterPro:IPR026122
PANTHER:PTHR10887:SF17 GeneTree:ENSGT00550000074391 CTD:4343
HOVERGEN:HBG052500 EMBL:X52574 EMBL:AK004542 EMBL:BC053743
EMBL:X75819 IPI:IPI00130328 PIR:A39611 RefSeq:NP_001156912.1
RefSeq:NP_001156913.1 RefSeq:NP_032645.2 UniGene:Mm.1597
ProteinModelPortal:P23249 SMR:P23249 DIP:DIP-48575N STRING:P23249
PhosphoSite:P23249 PaxDb:P23249 PRIDE:P23249
Ensembl:ENSMUST00000168015 GeneID:17454 KEGG:mmu:17454
NextBio:292100 Bgee:P23249 Genevestigator:P23249
GermOnline:ENSMUSG00000002227 Uniprot:P23249
Length = 1004
Score = 217 (81.4 bits), Expect = 1.6e-16, P = 1.6e-16
Identities = 55/123 (44%), Positives = 68/123 (55%)
Query: 62 PSGYFTHCVIDEAGQATEPEVLVPISLLH------RDNGHVVLAGDPLQLGPTVFSKLGQ 115
P +FTH IDEAG EPE LV I+ L G +VLAGDP QLGP + S L
Sbjct: 636 PIDHFTHIFIDEAGHCMEPESLVAIAGLMDVKETGNPGGQLVLAGDPRQLGPVLRSPLAL 695
Query: 116 QLELRISLLERLTG-RFLYSRDMSRFYATGGYDPRLVTRLVNNYRTMPEILKISSDLFYD 174
+ L SLLERL LY + GYDP+ +T+L+ NYR+ P IL I + L+YD
Sbjct: 696 KHGLGYSLLERLLAYNSLYKK------GPNGYDPQFITKLLRNYRSHPTILDIPNQLYYD 749
Query: 175 ASL 177
L
Sbjct: 750 GEL 752
Score = 116 (45.9 bits), Expect = 0.00022, P = 0.00022
Identities = 29/58 (50%), Positives = 33/58 (56%)
Query: 2 PAGYFTHCVIDEAGQATEPEVLVPISLLH------RDNGHVVLAGDPLQLGPTVFSKL 53
P +FTH IDEAG EPE LV I+ L G +VLAGDP QLGP + S L
Sbjct: 636 PIDHFTHIFIDEAGHCMEPESLVAIAGLMDVKETGNPGGQLVLAGDPRQLGPVLRSPL 693
>ZFIN|ZDB-GENE-060526-371 [details] [associations]
symbol:mov10b.2 "Moloney leukemia virus 10,
homolog, b.2" species:7955 "Danio rerio" [GO:0000932 "cytoplasmic
mRNA processing body" evidence=ISS] [GO:0035279 "mRNA cleavage
involved in gene silencing by miRNA" evidence=ISS] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] ZFIN:ZDB-GENE-060526-371
GO:GO:0005524 GO:GO:0003723 GO:GO:0004386 GO:GO:0000932
GO:GO:0035279 eggNOG:COG1112 InterPro:IPR026122
PANTHER:PTHR10887:SF17 GeneTree:ENSGT00550000074391 EMBL:BX323059
HOGENOM:HOG000239755 OrthoDB:EOG4SXNC4 IPI:IPI00611260
RefSeq:NP_001037805.1 UniGene:Dr.94434 ProteinModelPortal:Q1LXK5
Ensembl:ENSDART00000078491 GeneID:555950 KEGG:dre:555950 CTD:555950
InParanoid:Q1LXK5 NextBio:20881245 Uniprot:Q1LXK5
Length = 1015
Score = 215 (80.7 bits), Expect = 2.6e-16, P = 2.6e-16
Identities = 52/115 (45%), Positives = 70/115 (60%)
Query: 65 YFTHCVIDEAGQATEPEVLVPIS-LLHRDNGHVVLAGDPLQLGPTVFSKLGQQLELRISL 123
+FTH +DEAG A E E ++ ++ LL+ + G +VLAGDP QLGP + S L L +SL
Sbjct: 670 HFTHNFVDEAGHAVESETIISVAGLLNAEKGQLVLAGDPKQLGPILRSPLAINHGLDVSL 729
Query: 124 LERL-TGRFLYSRDMSRFYATGGYDPRLVTRLVNNYRTMPEILKISSDLFYDASL 177
LERL T LY R F D R V++L+ NYR+ P IL++ + LFYD L
Sbjct: 730 LERLMTQNDLYKRGDVEF------DNRYVSKLIMNYRSHPYILEVPNRLFYDGEL 778
Score = 125 (49.1 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 25/50 (50%), Positives = 35/50 (70%)
Query: 5 YFTHCVIDEAGQATEPEVLVPIS-LLHRDNGHVVLAGDPLQLGPTVFSKL 53
+FTH +DEAG A E E ++ ++ LL+ + G +VLAGDP QLGP + S L
Sbjct: 670 HFTHNFVDEAGHAVESETIISVAGLLNAEKGQLVLAGDPKQLGPILRSPL 719
>FB|FBgn0036451 [details] [associations]
symbol:CG9425 species:7227 "Drosophila melanogaster"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR003593
InterPro:IPR007087 InterPro:IPR011990 InterPro:IPR015880
Pfam:PF00642 PROSITE:PS00028 SMART:SM00355 SMART:SM00382
GO:GO:0005524 EMBL:AE014296 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 Gene3D:1.25.40.10 GO:GO:0017111 eggNOG:COG1112
GeneTree:ENSGT00550000074391 RefSeq:NP_996084.1 UniGene:Dm.11708
ProteinModelPortal:Q7KUL0 SMR:Q7KUL0 STRING:Q7KUL0 PaxDb:Q7KUL0
PRIDE:Q7KUL0 EnsemblMetazoa:FBtr0075693 EnsemblMetazoa:FBtr0333074
EnsemblMetazoa:FBtr0333075 GeneID:39613 KEGG:dme:Dmel_CG9425
UCSC:CG9425-RB FlyBase:FBgn0036451 InParanoid:Q7KUL0 OMA:WINELSG
OrthoDB:EOG46HDRH PhylomeDB:Q7KUL0 ChiTaRS:CG9425 GenomeRNAi:39613
NextBio:814517 ArrayExpress:Q7KUL0 Bgee:Q7KUL0 Uniprot:Q7KUL0
Length = 2103
Score = 192 (72.6 bits), Expect = 4.8e-14, Sum P(2) = 4.8e-14
Identities = 51/129 (39%), Positives = 73/129 (56%)
Query: 53 LGQQLELST---PSGYFTHCVIDEAGQATEPEVLVPISLLHRDNGHVVLAGDPLQLGPTV 109
L +EL+T P G FTH +DEA QA E E ++P++L + D+ +VLAGD +Q+ P +
Sbjct: 935 LSISMELATLGLPKGLFTHIFLDEAAQAMECEAIMPLALAN-DSTRIVLAGDHMQMSPEL 993
Query: 110 FSKLGQQLELRISLLERLTGRFLYSRDMSRFYATGGYDPRLVTRLVNNYRTMPEILKISS 169
FS ++ +L ISLLERL Y S F P + L NYR I++ +S
Sbjct: 994 FSAFAKERKLHISLLERL-----YDHYPSNF-------PCKIL-LCENYRAHEAIIRFTS 1040
Query: 170 DLFYDASLV 178
+LFY+ LV
Sbjct: 1041 ELFYEQKLV 1049
Score = 129 (50.5 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 25/58 (43%), Positives = 39/58 (67%)
Query: 2 PAGYFTHCVIDEAGQATEPEVLVPISLLHRDNGHVVLAGDPLQLGPTVFSKLGQQLEL 59
P G FTH +DEA QA E E ++P++L + D+ +VLAGD +Q+ P +FS ++ +L
Sbjct: 947 PKGLFTHIFLDEAAQAMECEAIMPLALAN-DSTRIVLAGDHMQMSPELFSAFAKERKL 1003
Score = 35 (17.4 bits), Expect = 4.8e-14, Sum P(2) = 4.8e-14
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 6 FTHCVIDEAGQATEPE 21
+T V+D QAT PE
Sbjct: 383 YTEQVLDRWIQATAPE 398
>FB|FBgn0034187 [details] [associations]
symbol:CG6967 species:7227 "Drosophila melanogaster"
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=ISS] UCSC:CG6967-RC
FlyBase:FBgn0034187 NextBio:801049 EMBL:AY119610
ProteinModelPortal:Q8MRI1 PRIDE:Q8MRI1 InParanoid:Q8MRI1
PhylomeDB:Q8MRI1 ArrayExpress:Q8MRI1 Bgee:Q8MRI1 Uniprot:Q8MRI1
Length = 825
Score = 192 (72.6 bits), Expect = 5.6e-14, P = 5.6e-14
Identities = 45/114 (39%), Positives = 64/114 (56%)
Query: 65 YFTHCVIDEAGQATEPEVLVPI-SLLHRDNGHVVLAGDPLQLGPTVFSKLGQQLELRISL 123
+FTH IDEAG +TEPE L+ I + + HV+L+GD QLG + S L L SL
Sbjct: 470 FFTHIFIDEAGASTEPEALIGIMGIKQTADCHVILSGDHKQLGAVIKSNRAASLGLSRSL 529
Query: 124 LERLTGRFLYSRDMSRFYATGGYDPRLVTRLVNNYRTMPEILKISSDLFYDASL 177
+ERL Y D + G YD RL NYR+ P+I+++ ++L+Y+ L
Sbjct: 530 MERLLQSDCYKSDEN-----GNYDRNRQMRLCRNYRSHPQIVRLFNELYYNGEL 578
Score = 115 (45.5 bits), Expect = 0.00024, P = 0.00024
Identities = 26/57 (45%), Positives = 34/57 (59%)
Query: 5 YFTHCVIDEAGQATEPEVLVPI-SLLHRDNGHVVLAGDPLQLGPTVFSKLGQQLELS 60
+FTH IDEAG +TEPE L+ I + + HV+L+GD QLG + S L LS
Sbjct: 470 FFTHIFIDEAGASTEPEALIGIMGIKQTADCHVILSGDHKQLGAVIKSNRAASLGLS 526
>UNIPROTKB|F1NPN9 [details] [associations]
symbol:LOC100857488 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR011990 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0008270 GO:GO:0003676 Gene3D:1.25.40.10 OMA:YRVALLY
GeneTree:ENSGT00550000074391 EMBL:AADN02030025 IPI:IPI00575663
Ensembl:ENSGALT00000005876 Uniprot:F1NPN9
Length = 1931
Score = 183 (69.5 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 47/123 (38%), Positives = 74/123 (60%)
Query: 56 QLELSTPSGYFTHCVIDEAGQATEPEVLVPISLLHRDNGHVVLAGDPLQLGPTVFSKLGQ 115
QL+L P G+FTH ++DEA QA E E ++P++L ++ N +VLAGD +QL P V+S+ +
Sbjct: 769 QLDLE-P-GFFTHILLDEAAQAMECETIMPLALANK-NTRIVLAGDHMQLSPFVYSEFAR 825
Query: 116 QLELRISLLERLTGRFLYSRDMSRFYATGGYDPRLVTRLVNNYRTMPEILKISSDLFYDA 175
+ L +SLL+RL Y + F R++ L NYR+ I+ +S+LFY+
Sbjct: 826 ERNLHVSLLDRL-----YEHYPAEFPC------RIL--LCENYRSHEAIINYTSELFYEG 872
Query: 176 SLV 178
L+
Sbjct: 873 KLM 875
Score = 132 (51.5 bits), Expect = 8.0e-07, P = 8.0e-07
Identities = 25/56 (44%), Positives = 40/56 (71%)
Query: 4 GYFTHCVIDEAGQATEPEVLVPISLLHRDNGHVVLAGDPLQLGPTVFSKLGQQLEL 59
G+FTH ++DEA QA E E ++P++L ++ N +VLAGD +QL P V+S+ ++ L
Sbjct: 775 GFFTHILLDEAAQAMECETIMPLALANK-NTRIVLAGDHMQLSPFVYSEFARERNL 829
>UNIPROTKB|I6L9H4 [details] [associations]
symbol:HELZ "Probable helicase with zinc finger domain"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0008270 GO:GO:0003676 EMBL:AC005544 EMBL:AC007448
UniGene:Hs.370140 UniGene:Hs.569824 HGNC:HGNC:16878 ChiTaRS:HELZ
EMBL:BC094881 ProteinModelPortal:I6L9H4 Ensembl:ENST00000579953
Uniprot:I6L9H4
Length = 1163
Score = 179 (68.1 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 47/123 (38%), Positives = 73/123 (59%)
Query: 56 QLELSTPSGYFTHCVIDEAGQATEPEVLVPISLLHRDNGHVVLAGDPLQLGPTVFSKLGQ 115
QL+L P G+FTH ++DEA QA E E ++P++L + N +VLAGD +QL P V+S+ +
Sbjct: 781 QLDLE-P-GFFTHILLDEAAQAMECETIMPLALATQ-NTRIVLAGDHMQLSPFVYSEFAR 837
Query: 116 QLELRISLLERLTGRFLYSRDMSRFYATGGYDPRLVTRLVNNYRTMPEILKISSDLFYDA 175
+ L +SLL+RL Y + F R++ L NYR+ I+ +S+LFY+
Sbjct: 838 ERNLHVSLLDRL-----YEHYPAEFPC------RIL--LCENYRSHEAIINYTSELFYEG 884
Query: 176 SLV 178
L+
Sbjct: 885 KLM 887
Score = 128 (50.1 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 25/56 (44%), Positives = 39/56 (69%)
Query: 4 GYFTHCVIDEAGQATEPEVLVPISLLHRDNGHVVLAGDPLQLGPTVFSKLGQQLEL 59
G+FTH ++DEA QA E E ++P++L + N +VLAGD +QL P V+S+ ++ L
Sbjct: 787 GFFTHILLDEAAQAMECETIMPLALATQ-NTRIVLAGDHMQLSPFVYSEFARERNL 841
>UNIPROTKB|E2R8C1 [details] [associations]
symbol:HELZ "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 GO:GO:0008270
GO:GO:0003676 CTD:9931 OMA:YRVALLY GeneTree:ENSGT00550000074391
EMBL:AAEX03006372 EMBL:AAEX03006373 EMBL:AAEX03006374
RefSeq:XP_862371.2 Ensembl:ENSCAFT00000018141 GeneID:490907
KEGG:cfa:490907 Uniprot:E2R8C1
Length = 1944
Score = 180 (68.4 bits), Expect = 3.2e-12, P = 3.2e-12
Identities = 47/123 (38%), Positives = 73/123 (59%)
Query: 56 QLELSTPSGYFTHCVIDEAGQATEPEVLVPISLLHRDNGHVVLAGDPLQLGPTVFSKLGQ 115
QL+L P G+FTH ++DEA QA E E ++P++L + N +VLAGD +QL P V+S+ +
Sbjct: 780 QLDLE-P-GFFTHILLDEAAQAMECETIMPLALATK-NTRIVLAGDHMQLSPFVYSEFAR 836
Query: 116 QLELRISLLERLTGRFLYSRDMSRFYATGGYDPRLVTRLVNNYRTMPEILKISSDLFYDA 175
+ L +SLL+RL Y + F R++ L NYR+ I+ +S+LFY+
Sbjct: 837 ERNLHVSLLDRL-----YEHYPAEFPC------RIL--LCENYRSHEAIINYTSELFYEG 883
Query: 176 SLV 178
L+
Sbjct: 884 KLM 886
Score = 129 (50.5 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 25/56 (44%), Positives = 39/56 (69%)
Query: 4 GYFTHCVIDEAGQATEPEVLVPISLLHRDNGHVVLAGDPLQLGPTVFSKLGQQLEL 59
G+FTH ++DEA QA E E ++P++L + N +VLAGD +QL P V+S+ ++ L
Sbjct: 786 GFFTHILLDEAAQAMECETIMPLALATK-NTRIVLAGDHMQLSPFVYSEFARERNL 840
>UNIPROTKB|F1RSM3 [details] [associations]
symbol:HELZ "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 GO:GO:0008270
GO:GO:0003676 CTD:9931 OMA:YRVALLY GeneTree:ENSGT00550000074391
EMBL:CU466377 EMBL:CU639426 EMBL:CU929837 RefSeq:XP_003131321.1
UniGene:Ssc.13421 Ensembl:ENSSSCT00000018802 GeneID:100524104
KEGG:ssc:100524104 Uniprot:F1RSM3
Length = 1944
Score = 180 (68.4 bits), Expect = 3.2e-12, P = 3.2e-12
Identities = 47/123 (38%), Positives = 73/123 (59%)
Query: 56 QLELSTPSGYFTHCVIDEAGQATEPEVLVPISLLHRDNGHVVLAGDPLQLGPTVFSKLGQ 115
QL+L P G+FTH ++DEA QA E E ++P++L + N +VLAGD +QL P V+S+ +
Sbjct: 780 QLDLE-P-GFFTHILLDEAAQAMECETIMPLALATK-NTRIVLAGDHMQLSPFVYSEFAR 836
Query: 116 QLELRISLLERLTGRFLYSRDMSRFYATGGYDPRLVTRLVNNYRTMPEILKISSDLFYDA 175
+ L +SLL+RL Y + F R++ L NYR+ I+ +S+LFY+
Sbjct: 837 ERNLHVSLLDRL-----YEHYPAEFPC------RIL--LCENYRSHEAIINYTSELFYEG 883
Query: 176 SLV 178
L+
Sbjct: 884 KLM 886
Score = 129 (50.5 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 25/56 (44%), Positives = 39/56 (69%)
Query: 4 GYFTHCVIDEAGQATEPEVLVPISLLHRDNGHVVLAGDPLQLGPTVFSKLGQQLEL 59
G+FTH ++DEA QA E E ++P++L + N +VLAGD +QL P V+S+ ++ L
Sbjct: 786 GFFTHILLDEAAQAMECETIMPLALATK-NTRIVLAGDHMQLSPFVYSEFARERNL 840
>MGI|MGI:1925705 [details] [associations]
symbol:Helz "helicase with zinc finger domain" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 MGI:MGI:1925705
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 GO:GO:0004386 eggNOG:COG1112 CTD:9931
HOGENOM:HOG000231202 HOVERGEN:HBG031603 EMBL:AB093209 EMBL:AL645947
EMBL:BC021818 EMBL:BC076626 EMBL:BC130582 EMBL:AK033094
IPI:IPI00453654 IPI:IPI00649664 IPI:IPI00915056 RefSeq:NP_938040.1
UniGene:Mm.272047 UniGene:Mm.394603 UniGene:Mm.490425
ProteinModelPortal:Q6DFV5 SMR:Q6DFV5 IntAct:Q6DFV5 STRING:Q6DFV5
PhosphoSite:Q6DFV5 PaxDb:Q6DFV5 PRIDE:Q6DFV5
Ensembl:ENSMUST00000075012 Ensembl:ENSMUST00000106746 GeneID:78455
KEGG:mmu:78455 UCSC:uc007mav.1 GeneTree:ENSGT00550000074391
InParanoid:Q8BZZ6 NextBio:348914 Bgee:Q6DFV5 Genevestigator:Q6DFV5
Uniprot:Q6DFV5
Length = 1964
Score = 180 (68.4 bits), Expect = 3.2e-12, P = 3.2e-12
Identities = 47/123 (38%), Positives = 73/123 (59%)
Query: 56 QLELSTPSGYFTHCVIDEAGQATEPEVLVPISLLHRDNGHVVLAGDPLQLGPTVFSKLGQ 115
QL+L P G+FTH ++DEA QA E E ++P++L + N +VLAGD +QL P V+S+ +
Sbjct: 780 QLDLE-P-GFFTHVLLDEAAQAMECETIMPLALATK-NTRIVLAGDHMQLSPFVYSEFAR 836
Query: 116 QLELRISLLERLTGRFLYSRDMSRFYATGGYDPRLVTRLVNNYRTMPEILKISSDLFYDA 175
+ L +SLL+RL Y + F R++ L NYR+ I+ +S+LFY+
Sbjct: 837 ERNLHVSLLDRL-----YEHYPAEFPC------RIL--LCENYRSHEAIINYTSELFYEG 883
Query: 176 SLV 178
L+
Sbjct: 884 KLM 886
Score = 129 (50.5 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 25/56 (44%), Positives = 39/56 (69%)
Query: 4 GYFTHCVIDEAGQATEPEVLVPISLLHRDNGHVVLAGDPLQLGPTVFSKLGQQLEL 59
G+FTH ++DEA QA E E ++P++L + N +VLAGD +QL P V+S+ ++ L
Sbjct: 786 GFFTHVLLDEAAQAMECETIMPLALATK-NTRIVLAGDHMQLSPFVYSEFARERNL 840
>RGD|1307049 [details] [associations]
symbol:Helz "helicase with zinc finger" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 RGD:1307049
GO:GO:0008270 GO:GO:0003676 CTD:9931 OrthoDB:EOG4NP72K OMA:YRVALLY
GeneTree:ENSGT00550000074391 IPI:IPI00364329 RefSeq:NP_001099318.2
ProteinModelPortal:D4ADZ6 Ensembl:ENSRNOT00000030300 GeneID:287773
KEGG:rno:287773 Uniprot:D4ADZ6
Length = 1964
Score = 180 (68.4 bits), Expect = 3.2e-12, P = 3.2e-12
Identities = 47/123 (38%), Positives = 73/123 (59%)
Query: 56 QLELSTPSGYFTHCVIDEAGQATEPEVLVPISLLHRDNGHVVLAGDPLQLGPTVFSKLGQ 115
QL+L P G+FTH ++DEA QA E E ++P++L + N +VLAGD +QL P V+S+ +
Sbjct: 781 QLDLE-P-GFFTHILLDEAAQAMECETIMPLALATK-NTRIVLAGDHMQLSPFVYSEFAR 837
Query: 116 QLELRISLLERLTGRFLYSRDMSRFYATGGYDPRLVTRLVNNYRTMPEILKISSDLFYDA 175
+ L +SLL+RL Y + F R++ L NYR+ I+ +S+LFY+
Sbjct: 838 ERNLHVSLLDRL-----YEHYPAEFPC------RIL--LCENYRSHEAIINYTSELFYEG 884
Query: 176 SLV 178
L+
Sbjct: 885 KLM 887
Score = 129 (50.5 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 25/56 (44%), Positives = 39/56 (69%)
Query: 4 GYFTHCVIDEAGQATEPEVLVPISLLHRDNGHVVLAGDPLQLGPTVFSKLGQQLEL 59
G+FTH ++DEA QA E E ++P++L + N +VLAGD +QL P V+S+ ++ L
Sbjct: 787 GFFTHILLDEAAQAMECETIMPLALATK-NTRIVLAGDHMQLSPFVYSEFARERNL 841
>ZFIN|ZDB-GENE-040426-2419 [details] [associations]
symbol:helz "helicase with zinc finger"
species:7955 "Danio rerio" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR011539 InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 ZFIN:ZDB-GENE-040426-2419 GO:GO:0005524 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 GO:GO:0003700 GO:GO:0003676
GO:GO:0004386 eggNOG:COG1112 EMBL:BC066461 IPI:IPI00500029
RefSeq:NP_998431.1 UniGene:Dr.35354 ProteinModelPortal:Q6NYU2
GeneID:406550 KEGG:dre:406550 CTD:9931 HOGENOM:HOG000231202
HOVERGEN:HBG031603 OrthoDB:EOG4NP72K NextBio:20818112
ArrayExpress:Q6NYU2 Uniprot:Q6NYU2
Length = 1860
Score = 179 (68.1 bits), Expect = 3.8e-12, P = 3.8e-12
Identities = 49/123 (39%), Positives = 71/123 (57%)
Query: 56 QLELSTPSGYFTHCVIDEAGQATEPEVLVPISLLHRDNGHVVLAGDPLQLGPTVFSKLGQ 115
QL+L P G FTH ++DEA QA E E ++P++L + VVLAGD +QL P V+S+ +
Sbjct: 773 QLDLE-P-GIFTHILLDEAAQAMECETIMPLALAVKST-RVVLAGDHMQLSPFVYSEFAR 829
Query: 116 QLELRISLLERLTGRFLYSRDMSRFYATGGYDPRLVTRLVNNYRTMPEILKISSDLFYDA 175
+ L +SLL+RL Y S Y R++ L NYR+ I+ +SDLFY+
Sbjct: 830 ERNLHVSLLDRL-----YEHYPSE------YPCRIL--LCENYRSHEAIINYTSDLFYEG 876
Query: 176 SLV 178
L+
Sbjct: 877 KLM 879
Score = 121 (47.7 bits), Expect = 9.0e-05, P = 9.0e-05
Identities = 25/56 (44%), Positives = 37/56 (66%)
Query: 4 GYFTHCVIDEAGQATEPEVLVPISLLHRDNGHVVLAGDPLQLGPTVFSKLGQQLEL 59
G FTH ++DEA QA E E ++P++L + VVLAGD +QL P V+S+ ++ L
Sbjct: 779 GIFTHILLDEAAQAMECETIMPLALAVKST-RVVLAGDHMQLSPFVYSEFARERNL 833
>UNIPROTKB|F1MKC7 [details] [associations]
symbol:Bt.110099 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR011990 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0008270 GO:GO:0003676 Gene3D:1.25.40.10 OMA:YRVALLY
GeneTree:ENSGT00550000074391 EMBL:DAAA02049790 EMBL:DAAA02049791
EMBL:DAAA02049792 EMBL:DAAA02049793 EMBL:DAAA02049794
EMBL:DAAA02049795 EMBL:DAAA02049796 EMBL:DAAA02049797
EMBL:DAAA02049798 EMBL:DAAA02049799 IPI:IPI00698970
Ensembl:ENSBTAT00000006233 Uniprot:F1MKC7
Length = 1941
Score = 179 (68.1 bits), Expect = 4.0e-12, P = 4.0e-12
Identities = 48/123 (39%), Positives = 72/123 (58%)
Query: 56 QLELSTPSGYFTHCVIDEAGQATEPEVLVPISLLHRDNGHVVLAGDPLQLGPTVFSKLGQ 115
QL+L P G+FTH ++DEA QA E E ++P++L R VVLAGD +QL P V+S+ +
Sbjct: 785 QLDLE-P-GFFTHILLDEAAQAMECETIMPLALATRHT-RVVLAGDHMQLSPFVYSEFAR 841
Query: 116 QLELRISLLERLTGRFLYSRDMSRFYATGGYDPRLVTRLVNNYRTMPEILKISSDLFYDA 175
+ L +SLL+RL Y + F R++ L NYR+ I+ +S+LFY+
Sbjct: 842 ERNLHVSLLDRL-----YEHYPAEFPC------RIL--LCENYRSHEAIINYTSELFYEG 888
Query: 176 SLV 178
L+
Sbjct: 889 KLM 891
Score = 128 (50.1 bits), Expect = 7.5e-06, P = 7.5e-06
Identities = 26/56 (46%), Positives = 38/56 (67%)
Query: 4 GYFTHCVIDEAGQATEPEVLVPISLLHRDNGHVVLAGDPLQLGPTVFSKLGQQLEL 59
G+FTH ++DEA QA E E ++P++L R VVLAGD +QL P V+S+ ++ L
Sbjct: 791 GFFTHILLDEAAQAMECETIMPLALATRHT-RVVLAGDHMQLSPFVYSEFARERNL 845
>UNIPROTKB|P42694 [details] [associations]
symbol:HELZ "Probable helicase with zinc finger domain"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 GO:GO:0004386 eggNOG:COG1112 HOVERGEN:HBG031603
OrthoDB:EOG4NP72K EMBL:D29677 EMBL:AC005544 EMBL:AC007448
IPI:IPI00000897 UniGene:Hs.370140 UniGene:Hs.569824
ProteinModelPortal:P42694 SMR:P42694 IntAct:P42694 STRING:P42694
PhosphoSite:P42694 DMDM:221222452 PaxDb:P42694 PRIDE:P42694
Ensembl:ENST00000358691 UCSC:uc002jfx.4 GeneCards:GC17M065066
HGNC:HGNC:16878 HPA:HPA028276 MIM:606699 neXtProt:NX_P42694
InParanoid:P42694 OMA:YRVALLY ChiTaRS:HELZ ArrayExpress:P42694
Bgee:P42694 CleanEx:HS_HELZ Genevestigator:P42694
GermOnline:ENSG00000198265 Uniprot:P42694
Length = 1942
Score = 179 (68.1 bits), Expect = 4.0e-12, P = 4.0e-12
Identities = 47/123 (38%), Positives = 73/123 (59%)
Query: 56 QLELSTPSGYFTHCVIDEAGQATEPEVLVPISLLHRDNGHVVLAGDPLQLGPTVFSKLGQ 115
QL+L P G+FTH ++DEA QA E E ++P++L + N +VLAGD +QL P V+S+ +
Sbjct: 780 QLDLE-P-GFFTHILLDEAAQAMECETIMPLALATQ-NTRIVLAGDHMQLSPFVYSEFAR 836
Query: 116 QLELRISLLERLTGRFLYSRDMSRFYATGGYDPRLVTRLVNNYRTMPEILKISSDLFYDA 175
+ L +SLL+RL Y + F R++ L NYR+ I+ +S+LFY+
Sbjct: 837 ERNLHVSLLDRL-----YEHYPAEFPC------RIL--LCENYRSHEAIINYTSELFYEG 883
Query: 176 SLV 178
L+
Sbjct: 884 KLM 886
Score = 128 (50.1 bits), Expect = 7.5e-06, P = 7.5e-06
Identities = 25/56 (44%), Positives = 39/56 (69%)
Query: 4 GYFTHCVIDEAGQATEPEVLVPISLLHRDNGHVVLAGDPLQLGPTVFSKLGQQLEL 59
G+FTH ++DEA QA E E ++P++L + N +VLAGD +QL P V+S+ ++ L
Sbjct: 786 GFFTHILLDEAAQAMECETIMPLALATQ-NTRIVLAGDHMQLSPFVYSEFARERNL 840
>UNIPROTKB|J3QS41 [details] [associations]
symbol:HELZ "Probable helicase with zinc finger domain"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0008270 GO:GO:0003676 EMBL:AC005544 EMBL:AC007448
HGNC:HGNC:16878 ChiTaRS:HELZ Ensembl:ENST00000580168 Uniprot:J3QS41
Length = 1943
Score = 179 (68.1 bits), Expect = 4.0e-12, P = 4.0e-12
Identities = 47/123 (38%), Positives = 73/123 (59%)
Query: 56 QLELSTPSGYFTHCVIDEAGQATEPEVLVPISLLHRDNGHVVLAGDPLQLGPTVFSKLGQ 115
QL+L P G+FTH ++DEA QA E E ++P++L + N +VLAGD +QL P V+S+ +
Sbjct: 781 QLDLE-P-GFFTHILLDEAAQAMECETIMPLALATQ-NTRIVLAGDHMQLSPFVYSEFAR 837
Query: 116 QLELRISLLERLTGRFLYSRDMSRFYATGGYDPRLVTRLVNNYRTMPEILKISSDLFYDA 175
+ L +SLL+RL Y + F R++ L NYR+ I+ +S+LFY+
Sbjct: 838 ERNLHVSLLDRL-----YEHYPAEFPC------RIL--LCENYRSHEAIINYTSELFYEG 884
Query: 176 SLV 178
L+
Sbjct: 885 KLM 887
Score = 128 (50.1 bits), Expect = 7.5e-06, P = 7.5e-06
Identities = 25/56 (44%), Positives = 39/56 (69%)
Query: 4 GYFTHCVIDEAGQATEPEVLVPISLLHRDNGHVVLAGDPLQLGPTVFSKLGQQLEL 59
G+FTH ++DEA QA E E ++P++L + N +VLAGD +QL P V+S+ ++ L
Sbjct: 787 GFFTHILLDEAAQAMECETIMPLALATQ-NTRIVLAGDHMQLSPFVYSEFARERNL 841
>FB|FBgn0033889 [details] [associations]
symbol:CG6701 species:7227 "Drosophila melanogaster"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR007087 InterPro:IPR015880
PROSITE:PS00028 SMART:SM00355 GO:GO:0008270 GO:GO:0005622
FlyBase:FBgn0033889 ChiTaRS:CG6701 EMBL:AY128442
ProteinModelPortal:Q8MQQ9 STRING:Q8MQQ9 PRIDE:Q8MQQ9
InParanoid:Q8MQQ9 ArrayExpress:Q8MQQ9 Bgee:Q8MQQ9 Uniprot:Q8MQQ9
Length = 1261
Score = 171 (65.3 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 38/112 (33%), Positives = 65/112 (58%)
Query: 66 FTHCVIDEAGQATEPEVLVPISLLHRDNGHVVLAGDPLQLGPTVFSKLGQQLELRISLLE 125
+TH +DEA +TE EVL+ I+ +++L+GD QLGP + S+ + L ++L E
Sbjct: 687 YTHVFVDEAAASTEAEVLMGITCTLSPTLNLILSGDHKQLGPVLQSQRANEWGLGLTLFE 746
Query: 126 RLTGRFLYSRDMSRFYATGGYDPRLVTRLVNNYRTMPEILKISSDLFYDASL 177
RL R Y + G Y+ + TRL+ N+R+ PEI+ + ++++Y+ L
Sbjct: 747 RLLQRKCYQVEED-----GSYNASVQTRLIRNFRSHPEIVSLYNNMYYEGHL 793
>UNIPROTKB|E1C0Z0 [details] [associations]
symbol:HELZ2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0004540 "ribonuclease
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0030374
"ligand-dependent nuclear receptor transcription coactivator
activity" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR001900 InterPro:IPR007087 InterPro:IPR015880
InterPro:IPR026855 Pfam:PF00773 PROSITE:PS00028 SMART:SM00355
SMART:SM00955 GO:GO:0008270 GO:GO:0003723 GO:GO:0005622
GO:GO:0004386 GO:GO:0004540 OMA:FRAAHIM PANTHER:PTHR10887:SF16
GeneTree:ENSGT00550000074391 EMBL:AADN02019144 IPI:IPI00594758
Ensembl:ENSGALT00000009906 Uniprot:E1C0Z0
Length = 2565
Score = 133 (51.9 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 43/125 (34%), Positives = 66/125 (52%)
Query: 51 SKLGQQLELSTPSGYFTHCVIDEAGQATEPEVLVPISLLHRDNGHVVLAGDPLQLGPTVF 110
S L + L+++ P GYFTH +IDEA Q E E L+P+S + +VLAGD +Q+ P +F
Sbjct: 645 SMLSKHLKVA-P-GYFTHIMIDEAAQMLECEALIPLSYATFET-RIVLAGDHMQITPKLF 701
Query: 111 SKLGQQLELRISLLERLTGRFLYSRDMSRFYATGGYDPRLVTRLV--NNYRTMPEILKIS 168
Q +LL RL F +FY ++ + +R++ NYR+ I++
Sbjct: 702 CVADGQSAYH-TLLNRL---F-------QFYQKEKHEVAMKSRIIFNENYRSTAGIIEFV 750
Query: 169 SDLFY 173
S FY
Sbjct: 751 SKHFY 755
Score = 112 (44.5 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 23/47 (48%), Positives = 31/47 (65%)
Query: 4 GYFTHCVIDEAGQATEPEVLVPISLLHRDNGHVVLAGDPLQLGPTVF 50
GYFTH +IDEA Q E E L+P+S + +VLAGD +Q+ P +F
Sbjct: 656 GYFTHIMIDEAAQMLECEALIPLSYATFET-RIVLAGDHMQITPKLF 701
Score = 112 (44.5 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 35/111 (31%), Positives = 57/111 (51%)
Query: 70 VIDEAGQATEPEVLVPISLLHRDNGHVVLAGDPLQLGPTVFSKLGQQLELRISLLER--- 126
+IDE +TEPE L+P+ + H+ VVL GD QL P V + + L + SL ER
Sbjct: 2274 LIDECAMSTEPETLIPL-VSHKHAEKVVLLGDHKQLKPVVNNDFCKSLGMETSLFERYQK 2332
Query: 127 ----LTGRFLYSRDMSRFYATGGYDPRLVTRLVNNYRTMPEILKISSDLFY 173
L ++ +++ F + Y+ RL +T P++L+I S L++
Sbjct: 2333 QAWMLDTQYRMHKNICEFPSQEFYEHRL--------KTCPQLLRIPSVLYH 2375
>UNIPROTKB|E2RBM4 [details] [associations]
symbol:PRIC285 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004540
"ribonuclease activity" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001900 InterPro:IPR003593
InterPro:IPR026855 Pfam:PF00773 PROSITE:PS50103 SMART:SM00382
SMART:SM00955 GO:GO:0005524 GO:GO:0008270 GO:GO:0003723
GO:GO:0004386 GO:GO:0004540 InterPro:IPR022966 PROSITE:PS01175
PANTHER:PTHR10887:SF16 GeneTree:ENSGT00550000074391
EMBL:AAEX03014158 Ensembl:ENSCAFT00000020582 OMA:RCQYAHS
Uniprot:E2RBM4
Length = 2919
Score = 129 (50.5 bits), Expect = 7.8e-06, P = 7.8e-06
Identities = 46/131 (35%), Positives = 59/131 (45%)
Query: 49 VFSKLGQQLELSTPSGYFTHCVIDEAGQATEPEVLVPISLLHRDNGHVVLAGDPLQLGPT 108
V + Q EL P+G+F+H +IDEA Q E E L P+ VVLAGD +Q+ P
Sbjct: 891 VVTTTSQARELRVPAGFFSHILIDEAAQMLECEALTPLRYA-APGTRVVLAGDHMQVTPR 949
Query: 109 VFSKLGQQLELRISLLERLTGRFLYSRDMSRFYATGGYDPRLVTRLVNNYRTMPEILKIS 168
+FS Q +LL RL Y R+ RL+ NYR+ IL
Sbjct: 950 LFSVPRAQAAGH-TLLYRLFQH--YQREAHEVAQRS----RLIFH--QNYRSTEAILSFV 1000
Query: 169 SDLFYDASLVP 179
S FY A P
Sbjct: 1001 SRHFYVAKGSP 1011
Score = 110 (43.8 bits), Expect = 7.4e-10, Sum P(2) = 7.4e-10
Identities = 24/50 (48%), Positives = 31/50 (62%)
Query: 2 PAGYFTHCVIDEAGQATEPEVLVPISLLHRDNGHVVLAGDPLQLGPTVFS 51
PAG+F+H +IDEA Q E E L P+ VVLAGD +Q+ P +FS
Sbjct: 904 PAGFFSHILIDEAAQMLECEALTPLRYA-APGTRVVLAGDHMQVTPRLFS 952
Score = 108 (43.1 bits), Expect = 7.4e-10, Sum P(2) = 7.4e-10
Identities = 28/57 (49%), Positives = 34/57 (59%)
Query: 70 VIDEAGQATEPEVLVPISLLHRDNGHVVLAGDPLQLGPTVFSKLGQQLELRISLLER 126
+IDEAG ATEPE L+P+ + VVL GD QL P V ++ Q L L SL ER
Sbjct: 2628 LIDEAGMATEPETLIPLVAFSKAE-KVVLLGDHKQLRPVVKNEQLQNLGLDRSLFER 2683
>RGD|1306056 [details] [associations]
symbol:Pric285 "peroxisomal proliferator-activated receptor A
interacting complex 285" species:10116 "Rattus norvegicus"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0004540 "ribonuclease activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030374
"ligand-dependent nuclear receptor transcription coactivator
activity" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR001900 InterPro:IPR003593 InterPro:IPR026855
Pfam:PF00773 SMART:SM00382 SMART:SM00955 RGD:1306056 GO:GO:0005524
GO:GO:0003723 GO:GO:0004386 GO:GO:0004540 PANTHER:PTHR10887:SF16
GeneTree:ENSGT00550000074391 IPI:IPI00567928 RefSeq:XP_001057758.2
RefSeq:XP_230961.5 UniGene:Rn.47450 ProteinModelPortal:D4ADC2
Ensembl:ENSRNOT00000017787 GeneID:296474 KEGG:rno:296474
UCSC:RGD:1306056 CTD:296474 OrthoDB:EOG4Q84WM NextBio:641262
ArrayExpress:D4ADC2 Uniprot:D4ADC2
Length = 2944
Score = 134 (52.2 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 46/127 (36%), Positives = 61/127 (48%)
Query: 49 VFSKLGQQLELSTPSGYFTHCVIDEAGQATEPEVLVPISLLHRDNGHVVLAGDPLQLGPT 108
V + Q EL P+G+F+H IDEA Q E E L+P+S VVLAGD +Q+ P
Sbjct: 889 VVTTTSQARELQVPAGFFSHIFIDEAAQMLECEALIPLSYALTLT-RVVLAGDHMQVTPR 947
Query: 109 VFSKLGQQLELRISLLERLTGRFLYSRDMSRFYATGGYDPRLVTRLVNNYRTMPEILKIS 168
+FS + + LL RL FLY + A R+V NYR+ I+
Sbjct: 948 LFS-VPRDKAAGHMLLHRL---FLYYQQEVHKIAQHS---RIVFH--ENYRSTAAIINFV 998
Query: 169 SDLFYDA 175
S FY A
Sbjct: 999 SRHFYVA 1005
Score = 112 (44.5 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 25/50 (50%), Positives = 32/50 (64%)
Query: 2 PAGYFTHCVIDEAGQATEPEVLVPISLLHRDNGHVVLAGDPLQLGPTVFS 51
PAG+F+H IDEA Q E E L+P+S VVLAGD +Q+ P +FS
Sbjct: 902 PAGFFSHIFIDEAAQMLECEALIPLSYALTLT-RVVLAGDHMQVTPRLFS 950
Score = 103 (41.3 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 26/57 (45%), Positives = 34/57 (59%)
Query: 70 VIDEAGQATEPEVLVPISLLHRDNGHVVLAGDPLQLGPTVFSKLGQQLELRISLLER 126
+IDEAG ATEPE L+P+ + VVL GD QL P V ++ + L + SL ER
Sbjct: 2653 LIDEAGMATEPETLIPLVCFSKTE-KVVLLGDHKQLRPVVKNEQLRNLGMDRSLFER 2708
>ZFIN|ZDB-GENE-070912-617 [details] [associations]
symbol:si:dkey-97a13.6 "si:dkey-97a13.6"
species:7955 "Danio rerio" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004540 "ribonuclease activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001900 InterPro:IPR003593 InterPro:IPR026855
Pfam:PF00773 SMART:SM00382 SMART:SM00955 ZFIN:ZDB-GENE-070912-617
GO:GO:0005524 GO:GO:0003723 GO:GO:0004386 GO:GO:0004540
PANTHER:PTHR10887:SF16 GeneTree:ENSGT00550000074391 EMBL:BX663525
IPI:IPI00499390 RefSeq:XP_699251.2 UniGene:Dr.89869
Ensembl:ENSDART00000017829 GeneID:570654 KEGG:dre:570654
NextBio:20890238 Uniprot:E7F3B1
Length = 2781
Score = 149 (57.5 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 44/116 (37%), Positives = 59/116 (50%)
Query: 58 ELSTPSGYFTHCVIDEAGQATEPEVLVPISLLHRDNGHVVLAGDPLQLGPTVFSKLGQQL 117
EL P G+FTH +IDEA Q E E L+ + L + VVLAGD +Q+ P +FS +
Sbjct: 673 ELKLPKGFFTHILIDEASQMLEGEALMALGLADKHT-RVVLAGDHMQMAPKLFSVTDDKR 731
Query: 118 ELRISLLERLTGRFLYSRDMSRFYATGGYDPRLVTRLVNNYRTMPEILKISSDLFY 173
+LL RL F Y +D S A R++ NYR+ EI+ S FY
Sbjct: 732 SEH-TLLNRL---FHYYQDQSINIAKKS---RIIFN--ENYRSTTEIVDFVSTYFY 778
Score = 116 (45.9 bits), Expect = 5.1e-09, Sum P(3) = 5.1e-09
Identities = 24/50 (48%), Positives = 32/50 (64%)
Query: 2 PAGYFTHCVIDEAGQATEPEVLVPISLLHRDNGHVVLAGDPLQLGPTVFS 51
P G+FTH +IDEA Q E E L+ + L + VVLAGD +Q+ P +FS
Sbjct: 677 PKGFFTHILIDEASQMLEGEALMALGLADKHT-RVVLAGDHMQMAPKLFS 725
Score = 90 (36.7 bits), Expect = 5.1e-09, Sum P(3) = 5.1e-09
Identities = 25/61 (40%), Positives = 33/61 (54%)
Query: 70 VIDEAGQATEPEVLVPISLLHRDNGHVVLAGDPLQLGPTVFSKLGQQLELRISLLERLTG 129
+IDE ATEP+ LVP+ + VVL GD QL P V + ++L + SL ER
Sbjct: 2494 LIDECAMATEPQTLVPLVSFKPEK--VVLLGDHKQLRPIVKNNHVRRLGMTRSLFERYMD 2551
Query: 130 R 130
R
Sbjct: 2552 R 2552
Score = 38 (18.4 bits), Expect = 5.1e-09, Sum P(3) = 5.1e-09
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 154 LVNNYRTMPEILKISSDLFYDASL 177
L YR EI K S+ +Y+ L
Sbjct: 2556 LDTQYRMHEEICKFPSEAYYNDML 2579
Score = 37 (18.1 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 15/49 (30%), Positives = 22/49 (44%)
Query: 18 TEPEVLVPISLLHRDNGHVVLAGDPLQLG-PTVFSKLGQQLELSTPSGY 65
T L ++LL +NG V D L+ P + G +L S+ S Y
Sbjct: 198 TTERSLAHVALLKVENGAVFSLSDSLRNTIPPITHIAGHELR-SSQSTY 245
>UNIPROTKB|Q9BYK8 [details] [associations]
symbol:HELZ2 "Helicase with zinc finger domain 2"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004540 "ribonuclease activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=NAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0030374 "ligand-dependent
nuclear receptor transcription coactivator activity" evidence=IDA]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0044255 "cellular lipid
metabolic process" evidence=TAS] [GO:0044281 "small molecule
metabolic process" evidence=TAS] Reactome:REACT_111217
InterPro:IPR001900 InterPro:IPR003593 InterPro:IPR015880
InterPro:IPR026855 Pfam:PF00773 PROSITE:PS00028 PROSITE:PS50157
SMART:SM00355 SMART:SM00382 SMART:SM00955 GO:GO:0005524
Reactome:REACT_111045 GO:GO:0005654 GO:GO:0044281 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0044255
GO:GO:0006351 GO:GO:0003723 GO:GO:0004386 GO:GO:0004540
GO:GO:0030374 eggNOG:COG0557 InterPro:IPR022966 EMBL:AL121829
EMBL:AF517673 EMBL:AB201715 EMBL:AB051556 EMBL:AK074171
EMBL:AK055611 IPI:IPI00249304 IPI:IPI00249305 IPI:IPI00736631
RefSeq:NP_001032412.2 RefSeq:NP_208384.3 UniGene:Hs.517180
ProteinModelPortal:Q9BYK8 IntAct:Q9BYK8 STRING:Q9BYK8
PhosphoSite:Q9BYK8 DMDM:209572784 PaxDb:Q9BYK8 PRIDE:Q9BYK8
GeneID:85441 KEGG:hsa:85441 UCSC:uc002yfl.1 UCSC:uc002yfm.2
CTD:85441 GeneCards:GC20M062189 HGNC:HGNC:30021 HPA:HPA051267
MIM:611265 neXtProt:NX_Q9BYK8 HOGENOM:HOG000231856
HOVERGEN:HBG080465 InParanoid:Q9BYK8 OMA:FRAAHIM PhylomeDB:Q9BYK8
GenomeRNAi:85441 NextBio:76020 ArrayExpress:Q9BYK8 Bgee:Q9BYK8
Genevestigator:Q9BYK8 GermOnline:ENSG00000130589
PANTHER:PTHR10887:SF16 Uniprot:Q9BYK8
Length = 2649
Score = 129 (50.5 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 45/128 (35%), Positives = 63/128 (49%)
Query: 49 VFSKLGQQLELSTPSGYFTHCVIDEAGQATEPEVLVPISLLHRDNG-HVVLAGDPLQLGP 107
V + Q EL P G+F+H +IDEA Q E E L P++ + +G +VLAGD +Q+ P
Sbjct: 644 VVTTTSQARELRVPVGFFSHILIDEAAQMLECEALTPLA--YASHGTRLVLAGDHMQVTP 701
Query: 108 TVFSKLGQQLELRISLLERLTGRFLYSRDMSRFYATGGYDPRLVTRLVNNYRTMPEILKI 167
+FS + + +LL RL FL + + A RLV NYR I+
Sbjct: 702 RLFS-VARARAAEHTLLHRL---FLCYQQETHEVAR---QSRLVFH--ENYRCTDAIVSF 752
Query: 168 SSDLFYDA 175
S FY A
Sbjct: 753 ISRHFYVA 760
Score = 108 (43.1 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 23/51 (45%), Positives = 34/51 (66%)
Query: 2 PAGYFTHCVIDEAGQATEPEVLVPISLLHRDNG-HVVLAGDPLQLGPTVFS 51
P G+F+H +IDEA Q E E L P++ + +G +VLAGD +Q+ P +FS
Sbjct: 657 PVGFFSHILIDEAAQMLECEALTPLA--YASHGTRLVLAGDHMQVTPRLFS 705
Score = 104 (41.7 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 27/57 (47%), Positives = 34/57 (59%)
Query: 70 VIDEAGQATEPEVLVPISLLHRDNGHVVLAGDPLQLGPTVFSKLGQQLELRISLLER 126
++DEAG ATEPE L+P+ + VVL GD QL P V ++ Q L L SL ER
Sbjct: 2358 LVDEAGMATEPETLIPLVQFPQAE-KVVLLGDHKQLRPVVKNERLQNLGLDRSLFER 2413
>UNIPROTKB|F1RMM8 [details] [associations]
symbol:LOC100519780 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0045944 "positive regulation of transcription from
RNA polymerase II promoter" evidence=IEA] [GO:0030374
"ligand-dependent nuclear receptor transcription coactivator
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004540
"ribonuclease activity" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001900 InterPro:IPR003593
InterPro:IPR026855 Pfam:PF00773 PROSITE:PS50103 SMART:SM00382
SMART:SM00955 GO:GO:0005524 GO:GO:0008270 GO:GO:0003723
GO:GO:0004386 GO:GO:0004540 InterPro:IPR022966 PROSITE:PS01175
OMA:FRAAHIM PANTHER:PTHR10887:SF16 GeneTree:ENSGT00550000074391
EMBL:FP102633 Ensembl:ENSSSCT00000003670 Uniprot:F1RMM8
Length = 2879
Score = 119 (46.9 bits), Expect = 0.00028, P = 0.00028
Identities = 44/133 (33%), Positives = 61/133 (45%)
Query: 49 VFSKLGQQLELSTPSGYFTHCVIDEAGQATEPEVLVPISLLHRDNGHVVLAGDPLQLGPT 108
V + Q L P+G+F+H IDEA Q E E L P+ VVLAGD +++ P
Sbjct: 888 VVASATQARGLRVPAGFFSHIFIDEAAQMLEWEALTPLRYA-TPGTRVVLAGDHMRVAPR 946
Query: 109 VFSKLGQQLELRISLLERLTGRFLYSRDMSRFYATGGYDPRLVTRLVNNYRTMPEILKIS 168
+FS ++ +LL RL F R+ + A R L NYR+ I++
Sbjct: 947 LFSAAAGRIA-GPTLLHRLLQHF---REQAPAVAQ-----RSCVILCKNYRSTEAIVRFV 997
Query: 169 SDLFYDAS-LVPH 180
S F AS PH
Sbjct: 998 SRHFSMASGSRPH 1010
Score = 105 (42.0 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 23/50 (46%), Positives = 30/50 (60%)
Query: 2 PAGYFTHCVIDEAGQATEPEVLVPISLLHRDNGHVVLAGDPLQLGPTVFS 51
PAG+F+H IDEA Q E E L P+ VVLAGD +++ P +FS
Sbjct: 901 PAGFFSHIFIDEAAQMLEWEALTPLRYA-TPGTRVVLAGDHMRVAPRLFS 949
Score = 103 (41.3 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 31/69 (44%), Positives = 39/69 (56%)
Query: 70 VIDEAGQATEPEVLVPISLLHRDNGHVVLAGDPLQLGPTVFSKLGQQLELRISLLERLTG 129
++DEAG A+EPE L+P+ + VVL GD QL P V S+ Q L L SLL+R
Sbjct: 2590 LVDEAGLASEPETLIPLVSFSQVE-KVVLLGDHKQLRPVVKSEQLQNLGLDRSLLQR--- 2645
Query: 130 RFLYSRDMS 138
Y RD S
Sbjct: 2646 ---YRRDAS 2651
>UNIPROTKB|E1C4T7 [details] [associations]
symbol:Gga.18015 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IEA] InterPro:IPR026121 GO:GO:0005737 GO:GO:0005654
GO:GO:0006302 GeneTree:ENSGT00580000081652 OMA:RLINHFE
PANTHER:PTHR10887:SF15 EMBL:AADN02026516 IPI:IPI00575045
Ensembl:ENSGALT00000005801 Uniprot:E1C4T7
Length = 2503
Score = 136 (52.9 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 43/113 (38%), Positives = 58/113 (51%)
Query: 66 FTHCVIDEAGQATEPEVLVPISLLHRDNGHVVLAGDPLQLGPTVFSKLGQQLELRISLLE 125
F+ ++DEAGQ+ E E L+P L+HR N +VL GDP QL PT+ S Q+ SL+
Sbjct: 2198 FSCVIVDEAGQSCEVETLIP--LIHRCN-KLVLVGDPRQLPPTIKSIKAQEYGYGQSLMA 2254
Query: 126 RLTGRFLYSRDMSRFYATGGYDPRL-VTRLVNNYRTMPEILKISSDLFYDASL 177
RL R L + + RL V +L YR P+I S YD +L
Sbjct: 2255 RLQ-RHLEEQVQNNLLR------RLPVVQLTVQYRMHPDICLFPSSYIYDKTL 2300
>DICTYBASE|DDB_G0289529 [details] [associations]
symbol:DDB_G0289529 species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016779 "nucleotidyltransferase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR002934
InterPro:IPR003593 Pfam:PF01909 SMART:SM00382
dictyBase:DDB_G0289529 GO:GO:0005524 EMBL:AAFI02000141
GO:GO:0017111 eggNOG:COG1112 GO:GO:0016779 RefSeq:XP_636183.1
ProteinModelPortal:Q54HF4 EnsemblProtists:DDB0219440 GeneID:8627170
KEGG:ddi:DDB_G0289529 InParanoid:Q54HF4 ProtClustDB:CLSZ2429765
Uniprot:Q54HF4
Length = 1677
Score = 131 (51.2 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 28/58 (48%), Positives = 40/58 (68%)
Query: 70 VIDEAGQATEPEVLVPISLLHRDNGHVVLAGDPLQLGPTVFSKLGQQLELRISLLERL 127
+IDE+ Q++EP ++P+SL ++L GDP+QL PT+FSK G L+ISL ERL
Sbjct: 1332 LIDESTQSSEPTSIIPLSL--GSVKKLILVGDPVQLPPTIFSKQGADCGLKISLFERL 1387
Score = 37 (18.1 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 154 LVNNYRTMPEILKISSDLFYDASL 177
L YR P K S+ FY+ +L
Sbjct: 1396 LNTQYRMHPVTSKFISEEFYNGTL 1419
>DICTYBASE|DDB_G0268660 [details] [associations]
symbol:DDB_G0268660 "DNA2/NAM7 helicase family
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR003593 SMART:SM00382 dictyBase:DDB_G0268660
Pfam:PF03828 GO:GO:0005524 EMBL:AAFI02000004 GO:GO:0004386
eggNOG:COG1112 InterPro:IPR014001 SMART:SM00487 InterPro:IPR002058
ProtClustDB:CLSZ2429765 RefSeq:XP_646847.2
ProteinModelPortal:Q55F23 EnsemblProtists:DDB0304625 GeneID:8616530
KEGG:ddi:DDB_G0268660 InParanoid:Q55F23 Uniprot:Q55F23
Length = 2314
Score = 129 (50.5 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 46/141 (32%), Positives = 67/141 (47%)
Query: 49 VFSKLGQQLELSTPSGYFTHCV-IDEAGQATEPEVLVPISLLHRDNGHVVLAGDPLQLGP 107
VFS L S S + + V +DE+ Q++EP L+P+ + + + ++L GDPLQL P
Sbjct: 1513 VFSTLSASGSGSVRSNFKANIVLVDESTQSSEPASLIPLCIGNIEK--LILVGDPLQLPP 1570
Query: 108 TVFSKLGQQLELRISLLERLTG---------RFLYSRDMSRFYATGGYDPRL-----VTR 153
T+FS + L ISL ERL+ ++ +SRF + Y RL V
Sbjct: 1571 TIFSSGSAENGLNISLFERLSKVLPVEMLNTQYRMHPTISRFPSNQFYKDRLLDGDNVKS 1630
Query: 154 LVNNYRTMPEILKISSDLFYD 174
LV N +K FYD
Sbjct: 1631 LVYNQHNFHSDIKYGPIRFYD 1651
>RGD|1565575 [details] [associations]
symbol:Setx "senataxin" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006302 "double-strand break repair"
evidence=IEA;ISO] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=ISO] [GO:0007623 "circadian rhythm"
evidence=ISO] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR026121 RGD:1565575 GO:GO:0006302 PANTHER:PTHR10887:SF15
IPI:IPI00560336 Ensembl:ENSRNOT00000018281 UCSC:RGD:1565575
ArrayExpress:F1M0E2 Uniprot:F1M0E2
Length = 380
Score = 123 (48.4 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 40/112 (35%), Positives = 57/112 (50%)
Query: 66 FTHCVIDEAGQATEPEVLVPISLLHRDNGHVVLAGDPLQLGPTVFSKLGQQLELRISLLE 125
F+ ++DEAGQ+ E E L P L+HR N +VL GDP QL PTV S Q+ S++
Sbjct: 24 FSCVIVDEAGQSCEVETLSP--LIHRCN-KLVLVGDPKQLPPTVISMKAQEYGYDQSMMA 80
Query: 126 RLTGRFLYSRDMSRFYATGGYDPRLVTRLVNNYRTMPEILKISSDLFYDASL 177
R L ++ + G P V +L YR P+I S+ Y+ +L
Sbjct: 81 RFCK--LLEENVEQNMI--GRLP--VLQLTIQYRMHPDICLFPSNYVYNKNL 126
Score = 110 (43.8 bits), Expect = 0.00035, P = 0.00035
Identities = 26/51 (50%), Positives = 33/51 (64%)
Query: 6 FTHCVIDEAGQATEPEVLVPISLLHRDNGHVVLAGDPLQLGPTVFSKLGQQ 56
F+ ++DEAGQ+ E E L P L+HR N +VL GDP QL PTV S Q+
Sbjct: 24 FSCVIVDEAGQSCEVETLSP--LIHRCN-KLVLVGDPKQLPPTVISMKAQE 71
>UNIPROTKB|F1PHA4 [details] [associations]
symbol:SETX "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006302 "double-strand break repair"
evidence=IEA] InterPro:IPR026121 GO:GO:0006302
GeneTree:ENSGT00580000081652 OMA:RLINHFE PANTHER:PTHR10887:SF15
EMBL:AAEX03006816 EMBL:AAEX03006817 Ensembl:ENSCAFT00000031656
Uniprot:F1PHA4
Length = 2531
Score = 128 (50.1 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 41/113 (36%), Positives = 56/113 (49%)
Query: 66 FTHCVIDEAGQATEPEVLVPISLLHRDNGHVVLAGDPLQLGPTVFSKLGQQLELRISLLE 125
F+ ++DEAGQ+ E E L P L+HR N ++L GDP QL PTV S Q+ S++
Sbjct: 2198 FSCVIVDEAGQSCEVETLTP--LIHRCN-KLILVGDPKQLPPTVISMKAQEYGYDQSMMA 2254
Query: 126 RLTGRFLYSRDMSRFYATGGYDPRL-VTRLVNNYRTMPEILKISSDLFYDASL 177
R + D G RL V +L YR P+I S+ Y+ SL
Sbjct: 2255 RF---YKLLEDNVEHNMIG----RLPVLQLTVQYRMHPDICLFPSNYVYNRSL 2300
>DICTYBASE|DDB_G0268924 [details] [associations]
symbol:DDB_G0268924 "Helicase SEN1" species:44689
"Dictyostelium discoideum" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 SMART:SM00382 dictyBase:DDB_G0268924
GO:GO:0005524 EMBL:AAFI02000004 GO:GO:0017111 eggNOG:COG1112
ProtClustDB:CLSZ2429765 RefSeq:XP_646844.2
ProteinModelPortal:Q55F26 EnsemblProtists:DDB0202279 GeneID:8616527
KEGG:ddi:DDB_G0268924 InParanoid:Q55F26 Uniprot:Q55F26
Length = 1772
Score = 125 (49.1 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 45/149 (30%), Positives = 69/149 (46%)
Query: 41 DPLQLGPTVFSKLGQQLELSTPSGYFTHCV-IDEAGQATEPEVLVPISLLHRDNGHVVLA 99
D + VFS L + + + + +DE+ Q+TEP ++P+ + + + ++L
Sbjct: 1353 DSIYRASIVFSTLSGSGSETVKNNFRADIILVDESTQSTEPSSIIPLCIGNIEK--LILV 1410
Query: 100 GDPLQLGPTVFSKLGQQLELRISLLERLTG----RFLYSR-----DMSRFYATGGYDPRL 150
GDPLQL PT+FS + L ISL ERL+ L+ + +SRF + Y RL
Sbjct: 1411 GDPLQLPPTIFSTESAENGLNISLFERLSKVLPVEMLHVQYRMHPTISRFPSNQFYRDRL 1470
Query: 151 -----VTRLVNNYRTMPEILKISSDLFYD 174
V LV N +K FYD
Sbjct: 1471 LDGDNVKSLVYNQHNFHSDIKYGPIRFYD 1499
>CGD|CAL0003666 [details] [associations]
symbol:NAM7 species:5476 "Candida albicans" [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=ISS] [GO:0005829 "cytosol" evidence=IEA]
[GO:0030466 "chromatin silencing at silent mating-type cassette"
evidence=IEA] [GO:0070478 "nuclear-transcribed mRNA catabolic
process, 3'-5' exonucleolytic nonsense-mediated decay"
evidence=IEA] [GO:0008298 "intracellular mRNA localization"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR003593 InterPro:IPR018999 Pfam:PF09416 SMART:SM00382
CGD:CAL0003666 GO:GO:0005524 GO:GO:0005737 GO:GO:0000184
GO:GO:0003677 GO:GO:0008270 GO:GO:0004386 eggNOG:COG1112
InterPro:IPR014001 SMART:SM00487 EMBL:AACQ01000063
EMBL:AACQ01000062 KO:K14326 RefSeq:XP_716778.1 RefSeq:XP_716838.1
ProteinModelPortal:Q5A507 SMR:Q5A507 STRING:Q5A507 GeneID:3641489
GeneID:3641540 KEGG:cal:CaO19.8554 KEGG:cal:CaO19.939
Uniprot:Q5A507
Length = 1019
Score = 116 (45.9 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 28/62 (45%), Positives = 36/62 (58%)
Query: 66 FTHCVIDEAGQATEPEVLVPISLLHRDNGHVVLAGDPLQLGPTVFSKLGQQLELRISLLE 125
F +IDE+ QA+EPEVL+PI + V+L GD QLGP + K L+ SL E
Sbjct: 599 FKTVLIDESTQASEPEVLIPIV---KGAKQVILVGDHQQLGPVILDKKAADAGLKQSLFE 655
Query: 126 RL 127
RL
Sbjct: 656 RL 657
Score = 46 (21.3 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 153 RLVNNYRTMPEILKISSDLFYDASL 177
RL YR P + + S++FY+ SL
Sbjct: 666 RLEVQYRMHPCLSEFPSNMFYEGSL 690
>UNIPROTKB|Q5A507 [details] [associations]
symbol:NAM7 "Putative uncharacterized protein NAM7"
species:237561 "Candida albicans SC5314" [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=ISS] InterPro:IPR003593 InterPro:IPR018999
Pfam:PF09416 SMART:SM00382 CGD:CAL0003666 GO:GO:0005524
GO:GO:0005737 GO:GO:0000184 GO:GO:0003677 GO:GO:0008270
GO:GO:0004386 eggNOG:COG1112 InterPro:IPR014001 SMART:SM00487
EMBL:AACQ01000063 EMBL:AACQ01000062 KO:K14326 RefSeq:XP_716778.1
RefSeq:XP_716838.1 ProteinModelPortal:Q5A507 SMR:Q5A507
STRING:Q5A507 GeneID:3641489 GeneID:3641540 KEGG:cal:CaO19.8554
KEGG:cal:CaO19.939 Uniprot:Q5A507
Length = 1019
Score = 116 (45.9 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 28/62 (45%), Positives = 36/62 (58%)
Query: 66 FTHCVIDEAGQATEPEVLVPISLLHRDNGHVVLAGDPLQLGPTVFSKLGQQLELRISLLE 125
F +IDE+ QA+EPEVL+PI + V+L GD QLGP + K L+ SL E
Sbjct: 599 FKTVLIDESTQASEPEVLIPIV---KGAKQVILVGDHQQLGPVILDKKAADAGLKQSLFE 655
Query: 126 RL 127
RL
Sbjct: 656 RL 657
Score = 46 (21.3 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 153 RLVNNYRTMPEILKISSDLFYDASL 177
RL YR P + + S++FY+ SL
Sbjct: 666 RLEVQYRMHPCLSEFPSNMFYEGSL 690
>UNIPROTKB|E1BAS6 [details] [associations]
symbol:SETX "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007623 "circadian rhythm" evidence=IEA] [GO:0006369
"termination of RNA polymerase II transcription" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
InterPro:IPR026121 GO:GO:0005737 GO:GO:0005654 GO:GO:0006302
GeneTree:ENSGT00580000081652 OMA:RLINHFE PANTHER:PTHR10887:SF15
EMBL:DAAA02032276 EMBL:DAAA02032274 EMBL:DAAA02032275
IPI:IPI00842535 Ensembl:ENSBTAT00000042924 Uniprot:E1BAS6
Length = 2662
Score = 125 (49.1 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 42/112 (37%), Positives = 54/112 (48%)
Query: 66 FTHCVIDEAGQATEPEVLVPISLLHRDNGHVVLAGDPLQLGPTVFSKLGQQLELRISLLE 125
F+ ++DEAGQ+ E E L P L+HR N +VL GDP QL PTV S Q S++
Sbjct: 2165 FSCVIVDEAGQSCEVETLTP--LIHRCN-KLVLVGDPKQLPPTVISVKAQDYGYDQSMM- 2220
Query: 126 RLTGRFLYSRDMSRFYATGGYDPRLVTRLVNNYRTMPEILKISSDLFYDASL 177
RF + S + G P V +L YR P+I S YD L
Sbjct: 2221 ---ARFHKLLEESVEHNMIGRLP--VLQLTIQYRMHPDICLFPSSYIYDGIL 2267
>FB|FBgn0035842 [details] [associations]
symbol:CG7504 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005875 "microtubule associated complex" evidence=IDA]
InterPro:IPR000253 InterPro:IPR008984 Pfam:PF00498 PROSITE:PS50006
SMART:SM00240 GO:GO:0005875 EMBL:AE014296 GO:GO:0006200
GO:GO:0016887 Gene3D:2.60.200.20 SUPFAM:SSF49879 eggNOG:COG1112
KO:K10706 GeneTree:ENSGT00580000081652 RefSeq:NP_001137907.1
UniGene:Dm.31993 ProteinModelPortal:B7Z0D7 SMR:B7Z0D7 STRING:B7Z0D7
PaxDb:B7Z0D7 EnsemblMetazoa:FBtr0273367 GeneID:38904
KEGG:dme:Dmel_CG7504 FlyBase:FBgn0035842 OMA:NRSKSCY
OrthoDB:EOG4DV42G GenomeRNAi:38904 NextBio:810939 Bgee:B7Z0D7
Uniprot:B7Z0D7
Length = 1676
Score = 122 (48.0 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 38/130 (29%), Positives = 58/130 (44%)
Query: 49 VFSKLGQQLELSTPSGYFTHCVIDEAGQATEPEVLVPISLLHRDNGHVVLAGDPLQLGPT 108
+ + L ++L+ +F C++DEA Q TEP L+P+ H+VL GD QL
Sbjct: 1368 ICTTLSSCVKLANYVDFFDICIVDEATQCTEPWTLLPMRF---GLTHMVLVGDMQQLPAV 1424
Query: 109 VFSKLGQQLELRISLLERLTGRFLYSRDMSRFYATGGYDPRLVTRLVNNYRTMPEILKIS 168
V SK L S+ +R+ D Y +L +L YR PEI +
Sbjct: 1425 VLSKKAIDFGLSNSMFDRIQRSLQTQLDKPGSYHL--MHTKLF-KLSTQYRMHPEICRWP 1481
Query: 169 SDLFYDASLV 178
+ FY+ L+
Sbjct: 1482 NQYFYEDQLI 1491
>DICTYBASE|DDB_G0288923 [details] [associations]
symbol:upf1 "regulator of nonsense transcripts 1"
species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;ISS]
[GO:0005524 "ATP binding" evidence=IEA;IC] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA;ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0003676
"nucleic acid binding" evidence=ISS] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR018999 Pfam:PF09416 dictyBase:DDB_G0288923
GO:GO:0005524 GO:GO:0005737 GO:GO:0000184 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 EMBL:AAFI02000126
GenomeReviews:CM000154_GR GO:GO:0003676 eggNOG:COG1112
GO:GO:0004004 KO:K14326 RefSeq:XP_636490.1
ProteinModelPortal:Q54I89 SMR:Q54I89 STRING:Q54I89
EnsemblProtists:DDB0233746 GeneID:8626873 KEGG:ddi:DDB_G0288923
InParanoid:Q54I89 Uniprot:Q54I89
Length = 1331
Score = 121 (47.7 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 38/104 (36%), Positives = 56/104 (53%)
Query: 66 FTHCVIDEAGQATEPEVLVPISLLHRDNGHVVLAGDPLQLGPTVFSK------LGQQL-E 118
F H +IDE+ QA+EPE L+P+ + + V+L GD QLGP + K L Q L E
Sbjct: 700 FPHILIDESTQASEPECLIPLMMGAKQ---VILVGDHRQLGPVLLCKKVVDAGLSQSLFE 756
Query: 119 LRISL---LERLTGRFLYSRDMSRFYATGGYDPRLVTRLVNNYR 159
ISL ERLT ++ ++ F + Y+ +LV+ L + R
Sbjct: 757 RLISLGHHPERLTIQYRMHPSLTEFPSNTSYEGQLVSELSHTDR 800
>ZFIN|ZDB-GENE-040426-2836 [details] [associations]
symbol:upf1 "upf1 regulator of nonsense
transcripts homolog (yeast)" species:7955 "Danio rerio" [GO:0003677
"DNA binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA
catabolic process, nonsense-mediated decay" evidence=IEA;IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0009790 "embryo
development" evidence=IMP] InterPro:IPR018999 Pfam:PF09416
ZFIN:ZDB-GENE-040426-2836 GO:GO:0005524 GO:GO:0005737 GO:GO:0000184
GO:GO:0003677 GO:GO:0008270 GO:GO:0009790 GO:GO:0004386
HOGENOM:HOG000205990 KO:K14326 CTD:5976 HOVERGEN:HBG061556
EMBL:BC045353 EMBL:FM986817 IPI:IPI00491565 RefSeq:NP_998639.1
UniGene:Dr.96025 SMR:Q7ZVZ4 STRING:Q7ZVZ4 GeneID:406783
KEGG:dre:406783 NextBio:20818296 Uniprot:Q7ZVZ4
Length = 1100
Score = 113 (44.8 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 28/62 (45%), Positives = 36/62 (58%)
Query: 66 FTHCVIDEAGQATEPEVLVPISLLHRDNGHVVLAGDPLQLGPTVFSKLGQQLELRISLLE 125
F +IDE+ QATEPE +VP+ L + ++L GD QLGP V K + L SL E
Sbjct: 610 FRSILIDESTQATEPECMVPVVLGAKQ---LILVGDHCQLGPVVMCKKAAKAGLSQSLFE 666
Query: 126 RL 127
RL
Sbjct: 667 RL 668
Score = 47 (21.6 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 153 RLVNNYRTMPEILKISSDLFYDASL 177
RL YR P + S++FY+ SL
Sbjct: 677 RLQVQYRMHPALSAFPSNIFYEGSL 701
>UNIPROTKB|E1C0J4 [details] [associations]
symbol:UPF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR018999 Pfam:PF09416 GO:GO:0005524 GO:GO:0005737
GO:GO:0000184 GO:GO:0003677 GO:GO:0008270 GO:GO:0004386
GeneTree:ENSGT00550000074391 EMBL:AADN02071779 IPI:IPI00598917
Ensembl:ENSGALT00000005099 NextBio:20823079 ArrayExpress:E1C0J4
Uniprot:E1C0J4
Length = 1117
Score = 113 (44.8 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 28/62 (45%), Positives = 36/62 (58%)
Query: 66 FTHCVIDEAGQATEPEVLVPISLLHRDNGHVVLAGDPLQLGPTVFSKLGQQLELRISLLE 125
F +IDE+ QATEPE +VP+ L + ++L GD QLGP V K + L SL E
Sbjct: 629 FRSILIDESTQATEPECMVPVVLGAKQ---LILVGDHCQLGPVVMCKKAAKAGLSQSLFE 685
Query: 126 RL 127
RL
Sbjct: 686 RL 687
Score = 47 (21.6 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 153 RLVNNYRTMPEILKISSDLFYDASL 177
RL YR P + S++FY+ SL
Sbjct: 696 RLQVQYRMHPALSAFPSNIFYEGSL 720
>MGI|MGI:107995 [details] [associations]
symbol:Upf1 "UPF1 regulator of nonsense transcripts homolog
(yeast)" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA
catabolic process, nonsense-mediated decay" evidence=ISO]
[GO:0000785 "chromatin" evidence=ISO] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=ISO]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISO] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006260 "DNA replication" evidence=ISO]
[GO:0006281 "DNA repair" evidence=ISO] [GO:0006449 "regulation of
translational termination" evidence=ISO] [GO:0007049 "cell cycle"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0009048 "dosage compensation by inactivation of X chromosome"
evidence=IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0035145 "exon-exon junction complex" evidence=ISO] [GO:0044530
"supraspliceosomal complex" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0071044 "histone mRNA catabolic process"
evidence=ISO] InterPro:IPR018999 Pfam:PF09416 MGI:MGI:107995
GO:GO:0005524 GO:GO:0000184 GO:GO:0046872 GO:GO:0003677
GO:GO:0006260 GO:GO:0008270 GO:GO:0006281 GO:GO:0000785
GO:GO:0003682 GO:GO:0003723 GO:GO:0007049 GO:GO:0000932
eggNOG:COG1112 GO:GO:0071044 GO:GO:0009048 GO:GO:0004004
GO:GO:0035145 GO:GO:0006449 GeneTree:ENSGT00550000074391
HOGENOM:HOG000205990 KO:K14326 OMA:MFYEGSL CTD:5976
HOVERGEN:HBG061556 ChiTaRS:UPF1 EMBL:AF322655 EMBL:AY597039
EMBL:AY597038 EMBL:AK148196 EMBL:BC030916 EMBL:BC052149
EMBL:BC056442 EMBL:AF182947 IPI:IPI00420949 IPI:IPI00850525
RefSeq:NP_001116301.1 RefSeq:NP_109605.2 UniGene:Mm.390048
ProteinModelPortal:Q9EPU0 SMR:Q9EPU0 STRING:Q9EPU0
PhosphoSite:Q9EPU0 PaxDb:Q9EPU0 PRIDE:Q9EPU0
Ensembl:ENSMUST00000075666 GeneID:19704 KEGG:mmu:19704
UCSC:uc009mab.2 UCSC:uc012gfa.1 InParanoid:Q9EPU0 OrthoDB:EOG4P8FH8
NextBio:297078 Bgee:Q9EPU0 Genevestigator:Q9EPU0
GermOnline:ENSMUSG00000058301 Uniprot:Q9EPU0
Length = 1124
Score = 113 (44.8 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 28/62 (45%), Positives = 36/62 (58%)
Query: 66 FTHCVIDEAGQATEPEVLVPISLLHRDNGHVVLAGDPLQLGPTVFSKLGQQLELRISLLE 125
F +IDE+ QATEPE +VP+ L + ++L GD QLGP V K + L SL E
Sbjct: 636 FRSILIDESTQATEPECMVPVVLGAKQ---LILVGDHCQLGPVVMCKKAAKAGLSQSLFE 692
Query: 126 RL 127
RL
Sbjct: 693 RL 694
Score = 47 (21.6 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 153 RLVNNYRTMPEILKISSDLFYDASL 177
RL YR P + S++FY+ SL
Sbjct: 703 RLQVQYRMHPALSAFPSNIFYEGSL 727
>UNIPROTKB|E1BEK9 [details] [associations]
symbol:UPF1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071044 "histone mRNA catabolic process" evidence=IEA]
[GO:0044530 "supraspliceosomal complex" evidence=IEA] [GO:0035145
"exon-exon junction complex" evidence=IEA] [GO:0009048 "dosage
compensation by inactivation of X chromosome" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0000785
"chromatin" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA] InterPro:IPR018999
Pfam:PF09416 GO:GO:0005524 GO:GO:0005737 GO:GO:0000184
GO:GO:0003677 GO:GO:0006260 GO:GO:0008270 GO:GO:0006281
GO:GO:0000785 GO:GO:0003682 GO:GO:0007049 GO:GO:0071044
GO:GO:0009048 GO:GO:0004004 GO:GO:0035145
GeneTree:ENSGT00550000074391 OMA:MFYEGSL EMBL:DAAA02019036
IPI:IPI00685259 Ensembl:ENSBTAT00000027868 Uniprot:E1BEK9
Length = 1127
Score = 113 (44.8 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 28/62 (45%), Positives = 36/62 (58%)
Query: 66 FTHCVIDEAGQATEPEVLVPISLLHRDNGHVVLAGDPLQLGPTVFSKLGQQLELRISLLE 125
F +IDE+ QATEPE +VP+ L + ++L GD QLGP V K + L SL E
Sbjct: 639 FRSILIDESTQATEPECMVPVVLGAKQ---LILVGDHCQLGPVVMCKKAAKAGLSQSLFE 695
Query: 126 RL 127
RL
Sbjct: 696 RL 697
Score = 47 (21.6 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 153 RLVNNYRTMPEILKISSDLFYDASL 177
RL YR P + S++FY+ SL
Sbjct: 706 RLQVQYRMHPALSAFPSNIFYEGSL 730
>UNIPROTKB|E1C0J3 [details] [associations]
symbol:UPF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0000785 "chromatin" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IEA] [GO:0006260 "DNA replication"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0009048 "dosage compensation by
inactivation of X chromosome" evidence=IEA] [GO:0035145 "exon-exon
junction complex" evidence=IEA] [GO:0044530 "supraspliceosomal
complex" evidence=IEA] [GO:0071044 "histone mRNA catabolic process"
evidence=IEA] InterPro:IPR018999 Pfam:PF09416 GO:GO:0005524
GO:GO:0005737 GO:GO:0000184 GO:GO:0003677 GO:GO:0006260
GO:GO:0008270 GO:GO:0006281 GO:GO:0000785 GO:GO:0003682
GO:GO:0007049 GO:GO:0071044 GO:GO:0009048 GO:GO:0004004
GO:GO:0035145 GeneTree:ENSGT00550000074391 OMA:MFYEGSL
EMBL:AADN02071779 IPI:IPI00571950 Ensembl:ENSGALT00000005101
ArrayExpress:E1C0J3 Uniprot:E1C0J3
Length = 1128
Score = 113 (44.8 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 28/62 (45%), Positives = 36/62 (58%)
Query: 66 FTHCVIDEAGQATEPEVLVPISLLHRDNGHVVLAGDPLQLGPTVFSKLGQQLELRISLLE 125
F +IDE+ QATEPE +VP+ L + ++L GD QLGP V K + L SL E
Sbjct: 640 FRSILIDESTQATEPECMVPVVLGAKQ---LILVGDHCQLGPVVMCKKAAKAGLSQSLFE 696
Query: 126 RL 127
RL
Sbjct: 697 RL 698
Score = 47 (21.6 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 153 RLVNNYRTMPEILKISSDLFYDASL 177
RL YR P + S++FY+ SL
Sbjct: 707 RLQVQYRMHPALSAFPSNIFYEGSL 731
>UNIPROTKB|Q92900 [details] [associations]
symbol:UPF1 "Regulator of nonsense transcripts 1"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0009048 "dosage compensation by
inactivation of X chromosome" evidence=IEA] [GO:0000932
"cytoplasmic mRNA processing body" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0000184 "nuclear-transcribed
mRNA catabolic process, nonsense-mediated decay"
evidence=IDA;NAS;IMP;TAS] [GO:0006449 "regulation of translational
termination" evidence=IMP;NAS] [GO:0004386 "helicase activity"
evidence=NAS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0003723 "RNA binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=NAS] [GO:0071044 "histone mRNA catabolic
process" evidence=IMP] [GO:0035145 "exon-exon junction complex"
evidence=IDA] [GO:0044530 "supraspliceosomal complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0000785 "chromatin"
evidence=IDA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0006260 "DNA replication" evidence=IMP] [GO:0006281 "DNA
repair" evidence=IDA] [GO:0006406 "mRNA export from nucleus"
evidence=TAS] [GO:0007049 "cell cycle" evidence=IMP] [GO:0005829
"cytosol" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016070 "RNA metabolic process" evidence=TAS] [GO:0016071 "mRNA
metabolic process" evidence=TAS] Reactome:REACT_71
Reactome:REACT_21257 InterPro:IPR018999 Pfam:PF09416 GO:GO:0005829
GO:GO:0005524 GO:GO:0010467 GO:GO:0000184 GO:GO:0046872
GO:GO:0003677 GO:GO:0006260 GO:GO:0008270 GO:GO:0006281
GO:GO:0000785 GO:GO:0003682 GO:GO:0003723 GO:GO:0007049
GO:GO:0006406 GO:GO:0000932 eggNOG:COG1112 GO:GO:0071044
GO:GO:0009048 GO:GO:0004004 GO:GO:0035145 EMBL:AC003972
GO:GO:0044530 GO:GO:0006449 HOGENOM:HOG000205990 KO:K14326
OMA:MFYEGSL CTD:5976 EMBL:U65533 EMBL:U59323 EMBL:D86988
EMBL:AF074016 EMBL:BC039817 IPI:IPI00034049 IPI:IPI00399170
RefSeq:NP_002902.2 UniGene:Hs.515266 PDB:2GJK PDB:2GK6 PDB:2GK7
PDB:2IYK PDB:2WJV PDB:2WJY PDB:2XZO PDB:2XZP PDBsum:2GJK
PDBsum:2GK6 PDBsum:2GK7 PDBsum:2IYK PDBsum:2WJV PDBsum:2WJY
PDBsum:2XZO PDBsum:2XZP ProteinModelPortal:Q92900 SMR:Q92900
DIP:DIP-29875N IntAct:Q92900 MINT:MINT-5005507 STRING:Q92900
PhosphoSite:Q92900 DMDM:17380291 PaxDb:Q92900 PRIDE:Q92900
Ensembl:ENST00000262803 GeneID:5976 KEGG:hsa:5976 UCSC:uc002nkf.3
UCSC:uc002nkg.3 GeneCards:GC19P018942 HGNC:HGNC:9962 HPA:HPA019587
HPA:HPA020857 MIM:601430 neXtProt:NX_Q92900 PharmGKB:PA34328
HOVERGEN:HBG061556 InParanoid:Q92900 ChiTaRS:UPF1
EvolutionaryTrace:Q92900 GenomeRNAi:5976 NextBio:23259
ArrayExpress:Q92900 Bgee:Q92900 CleanEx:HS_UPF1
Genevestigator:Q92900 GermOnline:ENSG00000005007 Uniprot:Q92900
Length = 1129
Score = 113 (44.8 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 28/62 (45%), Positives = 36/62 (58%)
Query: 66 FTHCVIDEAGQATEPEVLVPISLLHRDNGHVVLAGDPLQLGPTVFSKLGQQLELRISLLE 125
F +IDE+ QATEPE +VP+ L + ++L GD QLGP V K + L SL E
Sbjct: 641 FRSILIDESTQATEPECMVPVVLGAKQ---LILVGDHCQLGPVVMCKKAAKAGLSQSLFE 697
Query: 126 RL 127
RL
Sbjct: 698 RL 699
Score = 47 (21.6 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 153 RLVNNYRTMPEILKISSDLFYDASL 177
RL YR P + S++FY+ SL
Sbjct: 708 RLQVQYRMHPALSAFPSNIFYEGSL 732
>UNIPROTKB|E2RL81 [details] [associations]
symbol:UPF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] InterPro:IPR018999 Pfam:PF09416 GO:GO:0005524
GO:GO:0005737 GO:GO:0000184 GO:GO:0003677 GO:GO:0008270
GO:GO:0004386 GeneTree:ENSGT00550000074391 OMA:MFYEGSL
EMBL:AAEX03012279 Ensembl:ENSCAFT00000023180 Uniprot:E2RL81
Length = 1130
Score = 113 (44.8 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 28/62 (45%), Positives = 36/62 (58%)
Query: 66 FTHCVIDEAGQATEPEVLVPISLLHRDNGHVVLAGDPLQLGPTVFSKLGQQLELRISLLE 125
F +IDE+ QATEPE +VP+ L + ++L GD QLGP V K + L SL E
Sbjct: 642 FRSILIDESTQATEPECMVPVVLGAKQ---LILVGDHCQLGPVVMCKKAAKAGLSQSLFE 698
Query: 126 RL 127
RL
Sbjct: 699 RL 700
Score = 47 (21.6 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 153 RLVNNYRTMPEILKISSDLFYDASL 177
RL YR P + S++FY+ SL
Sbjct: 709 RLQVQYRMHPALSAFPSNIFYEGSL 733
>UNIPROTKB|D4AEB3 [details] [associations]
symbol:Setx "Protein Setx" species:10116 "Rattus
norvegicus" [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IEA] InterPro:IPR026121 RGD:1565575 GO:GO:0005737
GO:GO:0005654 GO:GO:0006302 KO:K10706 GeneTree:ENSGT00580000081652
CTD:23064 OMA:RLINHFE OrthoDB:EOG4XWFWX PANTHER:PTHR10887:SF15
IPI:IPI00476851 RefSeq:XP_342401.3 ProteinModelPortal:D4AEB3
PRIDE:D4AEB3 Ensembl:ENSRNOT00000017984 GeneID:362096
KEGG:rno:362096 NextBio:678646 ArrayExpress:D4AEB3 Uniprot:D4AEB3
Length = 2647
Score = 123 (48.4 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 40/112 (35%), Positives = 57/112 (50%)
Query: 66 FTHCVIDEAGQATEPEVLVPISLLHRDNGHVVLAGDPLQLGPTVFSKLGQQLELRISLLE 125
F+ ++DEAGQ+ E E L P L+HR N +VL GDP QL PTV S Q+ S++
Sbjct: 2152 FSCVIVDEAGQSCEVETLSP--LIHRCN-KLVLVGDPKQLPPTVISMKAQEYGYDQSMMA 2208
Query: 126 RLTGRFLYSRDMSRFYATGGYDPRLVTRLVNNYRTMPEILKISSDLFYDASL 177
R L ++ + G P V +L YR P+I S+ Y+ +L
Sbjct: 2209 RFCK--LLEENVEQNMI--GRLP--VLQLTIQYRMHPDICLFPSNYVYNKNL 2254
>UNIPROTKB|F1S0U6 [details] [associations]
symbol:SETX "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007623 "circadian rhythm" evidence=IEA] [GO:0006369
"termination of RNA polymerase II transcription" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
InterPro:IPR026121 GO:GO:0005737 GO:GO:0005654 GO:GO:0006302
KO:K10706 GeneTree:ENSGT00580000081652 CTD:23064 OMA:RLINHFE
PANTHER:PTHR10887:SF15 EMBL:CU550727 EMBL:CU914573
RefSeq:XP_003353743.1 UniGene:Ssc.45527 Ensembl:ENSSSCT00000006294
GeneID:100511239 KEGG:ssc:100511239 Uniprot:F1S0U6
Length = 2661
Score = 123 (48.4 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 39/112 (34%), Positives = 56/112 (50%)
Query: 66 FTHCVIDEAGQATEPEVLVPISLLHRDNGHVVLAGDPLQLGPTVFSKLGQQLELRISLLE 125
F+ ++DEAGQ+ E E L P L+HR N +VL GDP QL PTV S Q S++
Sbjct: 2169 FSCVIVDEAGQSCEVETLTP--LIHRCN-KLVLVGDPKQLPPTVISMKAQDYGYDQSMM- 2224
Query: 126 RLTGRFLYSRDMSRFYATGGYDPRLVTRLVNNYRTMPEILKISSDLFYDASL 177
RF + + + G P + +L YR P+I S+ Y+ +L
Sbjct: 2225 ---ARFYKLLEENVEHNVIGRLP--ILQLTVQYRMHPDICLFPSNYIYNRNL 2271
>MGI|MGI:2443480 [details] [associations]
symbol:Setx "senataxin" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005654 "nucleoplasm" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=ISO] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IMP] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR026121 MGI:MGI:2443480 GO:GO:0005524 GO:GO:0005737
GO:GO:0005654 GO:GO:0005730 GO:GO:0007623 GO:GO:0006302
GO:GO:0004386 eggNOG:COG1112 GO:GO:0006369 KO:K10706 EMBL:AL772379
GeneTree:ENSGT00580000081652 CTD:23064 HOVERGEN:HBG108476
OrthoDB:EOG4XWFWX PANTHER:PTHR10887:SF15 EMBL:AL845267
EMBL:AK044730 EMBL:AK048354 EMBL:AK077911 EMBL:BC046382
EMBL:BC058109 EMBL:BC079604 EMBL:AK129177 EMBL:BK001523
IPI:IPI00421108 IPI:IPI00626271 RefSeq:NP_932150.2 UniGene:Mm.41867
ProteinModelPortal:A2AKX3 SMR:A2AKX3 DIP:DIP-56995N IntAct:A2AKX3
STRING:A2AKX3 PhosphoSite:A2AKX3 PaxDb:A2AKX3 PRIDE:A2AKX3
Ensembl:ENSMUST00000061578 Ensembl:ENSMUST00000129544 GeneID:269254
KEGG:mmu:269254 UCSC:uc008izm.1 InParanoid:A2AKX3 NextBio:392760
Bgee:A2AKX3 CleanEx:MM_SETX Genevestigator:A2AKX3 Uniprot:A2AKX3
Length = 2646
Score = 122 (48.0 bits), Expect = 9.7e-05, P = 9.7e-05
Identities = 39/112 (34%), Positives = 57/112 (50%)
Query: 66 FTHCVIDEAGQATEPEVLVPISLLHRDNGHVVLAGDPLQLGPTVFSKLGQQLELRISLLE 125
F+ ++DEAGQ+ E E L P L+HR N ++L GDP QL PTV S Q+ S++
Sbjct: 2151 FSCVIVDEAGQSCEVETLSP--LIHRCN-KLILVGDPKQLPPTVISMKAQEYGYDQSMMA 2207
Query: 126 RLTGRFLYSRDMSRFYATGGYDPRLVTRLVNNYRTMPEILKISSDLFYDASL 177
R L ++ + G P V +L YR P+I S+ Y+ +L
Sbjct: 2208 RFCK--LLEENVEQNMI--GRLP--VLQLTIQYRMHPDICLFPSNYVYNKNL 2253
>UNIPROTKB|Q7Z333 [details] [associations]
symbol:SETX "Probable helicase senataxin" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008219
"cell death" evidence=IEA] [GO:0006369 "termination of RNA
polymerase II transcription" evidence=IEA] [GO:0007623 "circadian
rhythm" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IC] [GO:0003678 "DNA helicase
activity" evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005654 "nucleoplasm"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006302
"double-strand break repair" evidence=IDA] [GO:0032508 "DNA duplex
unwinding" evidence=TAS] InterPro:IPR026121 GO:GO:0005524
GO:GO:0005737 GO:GO:0005654 GO:GO:0005730 GO:GO:0003677
GO:GO:0008219 GO:GO:0006396 GO:GO:0006302 Orphanet:803
eggNOG:COG1112 GO:GO:0003678 KO:K10706 EMBL:AL159997 Orphanet:64753
EMBL:AY362728 EMBL:BX537849 EMBL:BX538166 EMBL:CR749249
EMBL:AL353701 EMBL:BC032600 EMBL:BC032622 EMBL:BC078166
EMBL:BC106017 EMBL:BC137350 EMBL:AB014525 EMBL:AK001456
EMBL:AK022902 IPI:IPI00142538 IPI:IPI00646645 IPI:IPI00719643
RefSeq:NP_055861.3 UniGene:Hs.460317 ProteinModelPortal:Q7Z333
SMR:Q7Z333 IntAct:Q7Z333 STRING:Q7Z333 PhosphoSite:Q7Z333
DMDM:296453021 PaxDb:Q7Z333 PRIDE:Q7Z333 Ensembl:ENST00000224140
Ensembl:ENST00000372169 Ensembl:ENST00000393220
Ensembl:ENST00000436441 GeneID:23064 KEGG:hsa:23064 UCSC:uc004cbj.3
UCSC:uc004cbk.3 UCSC:uc010mzt.3 CTD:23064 GeneCards:GC09M135136
HGNC:HGNC:445 HPA:HPA024105 MIM:602433 MIM:606002 MIM:608465
neXtProt:NX_Q7Z333 PharmGKB:PA24751 HOVERGEN:HBG108476
InParanoid:Q7Z333 OMA:RLINHFE OrthoDB:EOG4XWFWX PhylomeDB:Q7Z333
ChiTaRS:SETX GenomeRNAi:23064 NextBio:44145 ArrayExpress:Q7Z333
Bgee:Q7Z333 Genevestigator:Q7Z333 GermOnline:ENSG00000107290
PANTHER:PTHR10887:SF15 Uniprot:Q7Z333
Length = 2677
Score = 122 (48.0 bits), Expect = 9.8e-05, P = 9.8e-05
Identities = 39/113 (34%), Positives = 56/113 (49%)
Query: 66 FTHCVIDEAGQATEPEVLVPISLLHRDNGHVVLAGDPLQLGPTVFSKLGQQLELRISLLE 125
F+ ++DEAGQ+ E E L P L+HR N ++L GDP QL PTV S Q+ S++
Sbjct: 2175 FSCVIVDEAGQSCEIETLTP--LIHRCN-KLILVGDPKQLPPTVISMKAQEYGYDQSMMA 2231
Query: 126 RLTGRFLYSRDMSRFYATGGYDPRL-VTRLVNNYRTMPEILKISSDLFYDASL 177
R R L + RL + +L YR P+I S+ Y+ +L
Sbjct: 2232 RFC-RLLEENVEHNMIS------RLPILQLTVQYRMHPDICLFPSNYVYNRNL 2277
>DICTYBASE|DDB_G0268662 [details] [associations]
symbol:DDB_G0268662 "DNA2/NAM7 helicase family
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR003593 SMART:SM00382 dictyBase:DDB_G0268662
Pfam:PF03828 GO:GO:0005524 EMBL:AAFI02000004 GO:GO:0004386
eggNOG:COG1112 InterPro:IPR002058 ProtClustDB:CLSZ2429765
RefSeq:XP_646848.1 ProteinModelPortal:Q55F22
EnsemblProtists:DDB0304624 GeneID:8616531 KEGG:ddi:DDB_G0268662
InParanoid:Q55F22 Uniprot:Q55F22
Length = 2523
Score = 121 (47.7 bits), Expect = 0.00013, P = 0.00013
Identities = 39/119 (32%), Positives = 59/119 (49%)
Query: 70 VIDEAGQATEPEVLVPISLLHRDNGHVVLAGDPLQLGPTVFSKLGQQLELRISLLERLTG 129
++DE+ Q++EP L+P+ + + + ++L GDPLQL PT+FS + L ISL ERL+
Sbjct: 1734 LVDESTQSSEPASLIPLCIGNIEK--LILVGDPLQLPPTIFSSESAKNGLNISLFERLSK 1791
Query: 130 ---------RFLYSRDMSRFYATGGYDPRL-----VTRLVNNYRTMPEILKISSDLFYD 174
++ +SRF + Y RL V LV N +K FYD
Sbjct: 1792 VLPVEMLNTQYRMHPTISRFPSNQFYKDRLLDGDNVKSLVYNQHNFHSDIKYGPIRFYD 1850
>DICTYBASE|DDB_G0268914 [details] [associations]
symbol:DDB_G0268914 species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR003593
SMART:SM00382 dictyBase:DDB_G0268914 GO:GO:0005524
EMBL:AAFI02000004 GO:GO:0017111 eggNOG:COG1112 RefSeq:XP_647058.1
ProteinModelPortal:Q55EG2 EnsemblProtists:DDB0190122 GeneID:8616757
KEGG:ddi:DDB_G0268914 InParanoid:Q55EG2 OMA:ANCRVEN Uniprot:Q55EG2
Length = 4540
Score = 125 (49.1 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 26/59 (44%), Positives = 38/59 (64%)
Query: 70 VIDEAGQATEPEVLVPISLLHRDNGHVVLAGDPLQLGPTVFSKLGQQLELRISLLERLT 128
++DEA Q+ E ++P+SL + ++L GDP+QL PT+FSK L ISL ERL+
Sbjct: 3697 IVDEATQSCETSCIIPLSLGAKSMKKLILVGDPVQLPPTIFSKESIHCGLGISLFERLS 3755
Score = 36 (17.7 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 10/23 (43%), Positives = 11/23 (47%)
Query: 151 VTRLVNNYRTMPEILKISSDLFY 173
V+ L YR P I K S FY
Sbjct: 3760 VSMLNVQYRMHPLISKFPSSQFY 3782
>WB|WBGene00004880 [details] [associations]
symbol:smg-2 species:6239 "Caenorhabditis elegans"
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA;IGI] [GO:0005737 "cytoplasm"
evidence=IEA;IDA;TAS] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016246 "RNA interference" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0030538
"embryonic genitalia morphogenesis" evidence=IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0051721 "protein phosphatase 2A
binding" evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR018999 Pfam:PF09416 SMART:SM00382
EMBL:AF074017 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0016246 GO:GO:0000184 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003723 GO:GO:0040035 eggNOG:COG1112
GO:GO:0004004 GO:GO:0030538 HOGENOM:HOG000205990 KO:K14326
EMBL:FO081800 PIR:T43280 RefSeq:NP_490829.1
ProteinModelPortal:O76512 SMR:O76512 MINT:MINT-255670 STRING:O76512
PaxDb:O76512 GeneID:171696 KEGG:cel:CELE_Y48G8AL.6 UCSC:Y48G8AL.6
CTD:171696 WormBase:Y48G8AL.6 InParanoid:O76512 NextBio:872341
Uniprot:O76512
Length = 1069
Score = 106 (42.4 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 29/58 (50%), Positives = 33/58 (56%)
Query: 70 VIDEAGQATEPEVLVPISLLHRDNGHVVLAGDPLQLGPTVFSKLGQQLELRISLLERL 127
+IDE+ QATEPE+LV I R +VL GD QLGP V K L SL ERL
Sbjct: 608 LIDESTQATEPEILVSIM---RGVRQLVLVGDHCQLGPVVICKKAAIAGLSQSLFERL 662
Score = 51 (23.0 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 153 RLVNNYRTMPEILKISSDLFYDASL 177
RL YR P + + S++FYD SL
Sbjct: 671 RLQVQYRMHPVLSEFPSNVFYDGSL 695
>TAIR|locus:2171007 [details] [associations]
symbol:LBA1 "LOW-LEVEL BETA-AMYLASE 1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM;IDA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0010182 "sugar mediated signaling pathway"
evidence=RCA;IMP] [GO:0016246 "RNA interference" evidence=IGI]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IMP] [GO:0005829 "cytosol" evidence=IDA;RCA]
[GO:0009506 "plasmodesma" evidence=IDA] [GO:0042742 "defense
response to bacterium" evidence=IMP] [GO:0009755 "hormone-mediated
signaling pathway" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0000932 "cytoplasmic mRNA processing
body" evidence=IDA] [GO:0009744 "response to sucrose stimulus"
evidence=IGI] InterPro:IPR018999 Pfam:PF09416 GO:GO:0005829
GO:GO:0005886 GO:GO:0009506 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0016246 GO:GO:0000184 GO:GO:0046872
GO:GO:0003677 GO:GO:0009744 GO:GO:0008270 GO:GO:0010182
GO:GO:0004386 GO:GO:0000932 eggNOG:COG1112 InterPro:IPR014001
PROSITE:PS51192 EMBL:AB013394 HOGENOM:HOG000205990 KO:K14326
OMA:MFYEGSL EMBL:AF484122 IPI:IPI00541997 RefSeq:NP_199512.2
UniGene:At.8584 ProteinModelPortal:Q9FJR0 SMR:Q9FJR0 STRING:Q9FJR0
PaxDb:Q9FJR0 PRIDE:Q9FJR0 EnsemblPlants:AT5G47010.1 GeneID:834747
KEGG:ath:AT5G47010 GeneFarm:2422 TAIR:At5g47010 InParanoid:Q9FJR0
PhylomeDB:Q9FJR0 ProtClustDB:CLSN2680462 Genevestigator:Q9FJR0
GermOnline:AT5G47010 Uniprot:Q9FJR0
Length = 1254
Score = 116 (45.9 bits), Expect = 0.00028, P = 0.00028
Identities = 29/62 (46%), Positives = 36/62 (58%)
Query: 66 FTHCVIDEAGQATEPEVLVPISLLHRDNGHVVLAGDPLQLGPTVFSKLGQQLELRISLLE 125
F +IDE+ QATEPE L+P+ L + VVL GD QLGP + K + L SL E
Sbjct: 650 FRQVLIDESTQATEPECLIPLVLGVKQ---VVLVGDHCQLGPVIMCKKAARAGLAQSLFE 706
Query: 126 RL 127
RL
Sbjct: 707 RL 708
>FB|FBgn0030354 [details] [associations]
symbol:Upf1 "Upf1" species:7227 "Drosophila melanogaster"
[GO:0004386 "helicase activity" evidence=ISS] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=ISS;IMP;NAS] [GO:0005737 "cytoplasm"
evidence=IEA;NAS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016246 "RNA interference" evidence=IMP]
[GO:0035195 "gene silencing by miRNA" evidence=IMP] [GO:0071456
"cellular response to hypoxia" evidence=IMP] [GO:0035145 "exon-exon
junction complex" evidence=IDA] InterPro:IPR018999 Pfam:PF09416
GO:GO:0005524 GO:GO:0005737 GO:GO:0000184 GO:GO:0046872
GO:GO:0003677 EMBL:AE014298 GO:GO:0008270 GO:GO:0071456
GO:GO:0004386 eggNOG:COG1112 GeneTree:ENSGT00550000074391 KO:K14326
OMA:MFYEGSL EMBL:AY061379 RefSeq:NP_572767.1 UniGene:Dm.3617
ProteinModelPortal:Q9VYS3 SMR:Q9VYS3 STRING:Q9VYS3 PaxDb:Q9VYS3
PRIDE:Q9VYS3 EnsemblMetazoa:FBtr0073596 GeneID:32153
KEGG:dme:Dmel_CG1559 UCSC:CG1559-RA CTD:5976 FlyBase:FBgn0030354
InParanoid:Q9VYS3 OrthoDB:EOG476HF1 PhylomeDB:Q9VYS3
GenomeRNAi:32153 NextBio:777131 Bgee:Q9VYS3 GermOnline:CG1559
Uniprot:Q9VYS3
Length = 1180
Score = 115 (45.5 bits), Expect = 0.00037, P = 0.00037
Identities = 28/62 (45%), Positives = 37/62 (59%)
Query: 66 FTHCVIDEAGQATEPEVLVPISLLHRDNGHVVLAGDPLQLGPTVFSKLGQQLELRISLLE 125
FT +IDE+ Q+TEPE +VP+ L + ++L GD QLGP V K + L SL E
Sbjct: 611 FTSILIDESMQSTEPECMVPVVLGAKQ---LILVGDHCQLGPVVMCKKAARAGLSQSLFE 667
Query: 126 RL 127
RL
Sbjct: 668 RL 669
>DICTYBASE|DDB_G0285243 [details] [associations]
symbol:DDB_G0285243 "putative splicing endonuclease"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
dictyBase:DDB_G0285243 EMBL:AAFI02000076 KO:K10706
InterPro:IPR024481 Pfam:PF12726 RefSeq:XP_002649136.1
ProteinModelPortal:C7G036 EnsemblProtists:DDB0252844 GeneID:8625002
KEGG:ddi:DDB_G0285243 OMA:DSINMIF Uniprot:C7G036
Length = 2069
Score = 117 (46.2 bits), Expect = 0.00037, P = 0.00037
Identities = 28/69 (40%), Positives = 37/69 (53%)
Query: 59 LSTPSGYFTHCVIDEAGQATEPEVLVPISLLHRDNGHVVLAGDPLQLGPTVFSKLGQQLE 118
L T + F ++DEA QA E L+P L D +L GDP QL PT SK+ + +
Sbjct: 1600 LFTATKNFDLVIVDEAAQAVELSTLIP---LRHDVKKCILVGDPQQLPPTTISKVATKFQ 1656
Query: 119 LRISLLERL 127
ISL +RL
Sbjct: 1657 YEISLFQRL 1665
>ZFIN|ZDB-GENE-070402-1 [details] [associations]
symbol:setx "senataxin" species:7955 "Danio rerio"
[GO:0006302 "double-strand break repair" evidence=IEA]
InterPro:IPR026121 ZFIN:ZDB-GENE-070402-1 GO:GO:0006302
InterPro:IPR024481 Pfam:PF12726 GeneTree:ENSGT00580000081652
PANTHER:PTHR10887:SF15 EMBL:CU927918 IPI:IPI00481119
Ensembl:ENSDART00000082314 Ensembl:ENSDART00000149777
Uniprot:E7FBJ2
Length = 2368
Score = 117 (46.2 bits), Expect = 0.00043, P = 0.00043
Identities = 39/112 (34%), Positives = 60/112 (53%)
Query: 66 FTHCVIDEAGQATEPEVLVPISLLHRDNGHVVLAGDPLQLGPTVFSKLGQQLELRISLLE 125
F+ +IDEA QA E E L+P +L+R V+L GDP QL PTV S+ ++ SL+
Sbjct: 1955 FSCVIIDEASQAKETETLIP--MLYRCPS-VILVGDPNQLPPTVVSQKAKEFGFDQSLMA 2011
Query: 126 RLTGRFLYSRDMSRFYATGGYDPRLVTRLVNNYRTMPEILKISSDLFYDASL 177
RL + L+ + S+ P L+ + YR P+I + S Y+++L
Sbjct: 2012 RLC-KSLHPSN-SKL------PPILLLSM--QYRMHPDICEFPSKYIYNSAL 2053
>POMBASE|SPCC737.07c [details] [associations]
symbol:SPCC737.07c "DNA polymerase alpha-associated DNA
helicase A (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006273
"lagging strand elongation" evidence=ISO] [GO:0033203 "DNA helicase
A complex" evidence=ISO] [GO:0043141 "ATP-dependent 5'-3' DNA
helicase activity" evidence=ISO] [GO:0043596 "nuclear replication
fork" evidence=IC] [GO:0005658 "alpha DNA polymerase:primase
complex" evidence=ISO] InterPro:IPR003593 SMART:SM00382
PomBase:SPCC737.07c GO:GO:0005829 GO:GO:0005524 EMBL:CU329672
GenomeReviews:CU329672_GR eggNOG:COG1112 GO:GO:0006273
GO:GO:0043141 PIR:T41580 RefSeq:NP_588369.1
ProteinModelPortal:O94247 STRING:O94247 EnsemblFungi:SPCC737.07c.1
GeneID:2539412 KEGG:spo:SPCC737.07c HOGENOM:HOG000185831
OMA:ERTIFLE OrthoDB:EOG444PTN NextBio:20800576 GO:GO:0033203
Uniprot:O94247
Length = 660
Score = 94 (38.1 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 26/62 (41%), Positives = 36/62 (58%)
Query: 66 FTHCVIDEAGQATEPEVLVPISLLHRDNGHVVLAGDPLQLGPTVFSKLGQQLELRISLLE 125
F +IDEA QA EP+ +P+ +++ V+LAGD +QL P V SK IS+ E
Sbjct: 383 FDAVIIDEASQALEPQCWIPLLGMNK----VILAGDHMQLSPNVQSKRPY-----ISMFE 433
Query: 126 RL 127
RL
Sbjct: 434 RL 435
Score = 57 (25.1 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 15/31 (48%), Positives = 17/31 (54%)
Query: 150 LVTRLVN-NYRTMPEILKISSDLFYDASLVP 179
LV +N YR I K SD FYD+ LVP
Sbjct: 442 LVKCFLNIQYRMHELISKFPSDTFYDSKLVP 472
>POMBASE|SPAC16C9.06c [details] [associations]
symbol:upf1 "ATP-dependent RNA helicase Upf1"
species:4896 "Schizosaccharomyces pombe" [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=ISO] [GO:0002184 "cytoplasmic translational
termination" evidence=NAS] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IC] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006415
"translational termination" evidence=ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR018999
Pfam:PF09416 SMART:SM00382 PomBase:SPAC16C9.06c GO:GO:0005829
GO:GO:0005524 EMBL:CU329670 GO:GO:0000184 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 GO:GO:0004004 GO:GO:0002184 HOGENOM:HOG000205990
KO:K14326 OMA:MFYEGSL OrthoDB:EOG405W86 PIR:S62476
RefSeq:NP_593080.1 ProteinModelPortal:Q09820 SMR:Q09820
STRING:Q09820 PRIDE:Q09820 EnsemblFungi:SPAC16C9.06c.1
GeneID:2542327 KEGG:spo:SPAC16C9.06c NextBio:20803388
Uniprot:Q09820
Length = 925
Score = 111 (44.1 bits), Expect = 0.00089, P = 0.00089
Identities = 29/62 (46%), Positives = 36/62 (58%)
Query: 66 FTHCVIDEAGQATEPEVLVPISLLHRDNGHVVLAGDPLQLGPTVFSKLGQQLELRISLLE 125
F +IDEA QA+EPE ++P+ L + VVL GD QLGP V +K L SL E
Sbjct: 558 FRSVLIDEATQASEPECMIPLVLGAKQ---VVLVGDHQQLGPVVMNKKVALASLSQSLFE 614
Query: 126 RL 127
RL
Sbjct: 615 RL 616
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.140 0.415 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 181 181 0.00095 109 3 11 22 0.42 32
31 0.40 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 71
No. of states in DFA: 521 (55 KB)
Total size of DFA: 127 KB (2081 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 16.83u 0.14s 16.97t Elapsed: 00:00:01
Total cpu time: 16.83u 0.14s 16.97t Elapsed: 00:00:01
Start: Thu Aug 15 15:36:44 2013 End: Thu Aug 15 15:36:45 2013