Query psy3903
Match_columns 112
No_of_seqs 148 out of 1039
Neff 6.7
Searched_HMMs 29240
Date Fri Aug 16 20:22:37 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3903.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/3903hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ml5_A Carbonic anhydrase 7; p 100.0 1E-36 3.5E-41 232.9 9.8 97 3-99 172-268 (269)
2 3k34_A Carbonic anhydrase 2; a 100.0 1.2E-36 4E-41 231.5 9.1 96 4-99 165-260 (260)
3 1keq_A F65A/Y131C-MI carbonic 100.0 1.7E-36 5.8E-41 229.3 9.7 101 4-104 145-245 (248)
4 2foy_A Carbonic anhydrase 1; l 100.0 3.9E-36 1.3E-40 228.6 9.7 95 4-98 166-260 (260)
5 2hfx_A Carbonic anhydrase 3; p 100.0 3.7E-36 1.3E-40 228.7 9.0 96 4-99 165-260 (260)
6 3d0n_A Carbonic anhydrase 13; 100.0 3.1E-36 1E-40 229.6 8.5 96 4-99 169-264 (264)
7 1rj5_A Carbonic anhydrase XIV; 100.0 4.5E-35 1.5E-39 222.7 9.4 94 4-98 166-261 (261)
8 2w2j_A Carbonic anhydrase-rela 100.0 4.2E-35 1.4E-39 226.1 8.3 96 4-99 189-291 (291)
9 1jd0_A Carbonic anhydrase XII; 100.0 1.4E-34 4.7E-39 220.4 10.4 96 4-99 164-262 (263)
10 3iai_A Carbonic anhydrase 9; t 100.0 1E-34 3.5E-39 220.6 8.9 92 4-98 164-256 (257)
11 3fw3_A Carbonic anhydrase 4; s 100.0 1.4E-34 4.9E-39 220.7 9.3 93 4-97 171-266 (266)
12 3jxf_A Receptor-type tyrosine- 100.0 9.6E-35 3.3E-39 222.4 5.4 96 4-99 172-271 (272)
13 3jxg_A Receptor-type tyrosine- 100.0 2.7E-34 9.4E-39 219.5 7.7 94 4-97 172-269 (269)
14 3fe4_A Carbonic anhydrase 6; s 100.0 2.8E-34 9.5E-39 220.4 7.4 95 4-101 167-262 (278)
15 2znc_A Carbonic anhydrase IV; 100.0 1.1E-33 3.9E-38 214.7 8.3 94 4-98 161-257 (258)
16 1kop_A Carbonic anhydrase; lya 100.0 3.7E-32 1.3E-36 202.9 6.6 77 9-95 146-222 (223)
17 1y7w_A Halotolerant alpha-type 100.0 6.4E-32 2.2E-36 208.2 7.1 90 4-96 198-288 (291)
18 4e9o_X D8L antigen, IMV membra 100.0 1.2E-31 4.1E-36 205.1 7.4 102 4-108 140-244 (269)
19 3q31_A Carbonic anhydrase; gly 100.0 1.3E-30 4.5E-35 196.8 4.2 81 4-95 154-236 (244)
20 3b1b_A Carbonic anhydrase 1; N 100.0 2.4E-29 8.1E-34 199.9 5.6 84 14-97 237-374 (377)
21 4fmh_A VP1; viral capsid prote 47.1 11 0.00037 28.6 2.4 34 8-41 183-225 (289)
22 3s7v_A Major capsid protein VP 38.0 20 0.0007 26.9 2.6 25 17-41 187-217 (277)
23 1vps_A Polyomavirus VP1 pentam 37.5 19 0.00066 27.2 2.4 25 17-41 191-221 (289)
24 3nxg_A Major capsid protein VP 36.0 17 0.00058 27.3 1.9 25 17-41 178-208 (272)
25 1sid_A Polyomavirus coat prote 31.8 14 0.00047 29.0 0.8 25 17-41 222-252 (383)
26 1sva_1 Simian virus 40; virus 31.8 17 0.00058 28.3 1.3 25 17-41 203-233 (361)
27 3iys_A Major capsid protein VP 31.7 18 0.0006 28.0 1.4 25 17-41 194-224 (343)
28 1beb_A Beta-lactoglobulin; lip 25.7 80 0.0027 20.3 3.8 26 43-69 116-141 (162)
No 1
>3ml5_A Carbonic anhydrase 7; protein-inhibitor complex, lyase; HET: AZM; 2.05A {Homo sapiens} SCOP: b.74.1.1 PDB: 3mdz_A*
Probab=100.00 E-value=1e-36 Score=232.91 Aligned_cols=97 Identities=28% Similarity=0.505 Sum_probs=89.1
Q ss_pred CCCCCCCceeEecCCCCCccCCCCCCceEEeeeccCCCCccceEEEEecccccCCHHHHHHHHHhhcCCCCCCCCCCCCC
Q psy3903 3 TLCPVSGTSVPIRHLSLRSFMPETNSYMTYEGSTTHPGCWETTVWIIYNRPIYMTKQELYALRRLKQGSEEQPKAPLGNN 82 (112)
Q Consensus 3 ~~i~~~g~~~~i~~~~l~~llp~~~~yy~Y~GSLTtPpC~E~V~WiV~~~pi~iS~~Ql~~fr~l~~~~~~~~~~~~~~N 82 (112)
..|+.+|+++.+..|++.+|||+..+||+|.||||||||+|+|+|+||++||.||.+||++||+++...+++....|.+|
T Consensus 172 ~~i~~~g~~~~~~~~~l~~Llp~~~~yy~Y~GSLTTPPC~E~V~W~V~~~pi~IS~~Ql~~fr~l~~~~~~~~~~~~~~N 251 (269)
T 3ml5_A 172 YMVRFKGTKAQFSCFNPKSLLPASRHYWTYPGSLTTPPLSESVTWIVLREPISISERQMGKFRSLLFTSEDDERIHMVNN 251 (269)
T ss_dssp TTTCSTTEEEECCSCCGGGGSCSCCCEEEEEECCSSTTCCSCEEEEEESSCEEECHHHHHHHHTCBSSCTTSCCCBCCCC
T ss_pred HhhhccCceeEEeccCHHHhCCCCCCeEEEeCCCcCCCCcccEEEEEecceeEECHHHHHHHHHHHhccCCCccCccCCc
Confidence 35778999999988999999999889999999999999999999999999999999999999999876655555679999
Q ss_pred CCCCCCCCCCEEEEeee
Q psy3903 83 VRPLQFIHSRTVRTNID 99 (112)
Q Consensus 83 ~Rp~Qpln~R~V~~~~~ 99 (112)
+||+||||||.|++||.
T Consensus 252 ~Rp~QpLn~R~V~~sf~ 268 (269)
T 3ml5_A 252 FRPPQPLKGRVVKASFR 268 (269)
T ss_dssp CCCCCCCTTCCCEESSC
T ss_pred CCCCCCCCCCEEEEecC
Confidence 99999999999999985
No 2
>3k34_A Carbonic anhydrase 2; atomic resolution, sulfonamide inhibitor mutation, lyase, metal-binding, lyase-lyase inhibitor compl; HET: HGB SUA; 0.90A {Homo sapiens} SCOP: b.74.1.1 PDB: 1ca3_A* 1cnw_A* 1cny_A* 1eou_A* 1g6v_A 1hca_A 1kwq_A* 1kwr_A* 1t9n_A 1tb0_X 1tbt_X 1te3_X 1teq_X 1teu_X 1cnx_A 1xev_A 1xeg_A 2ax2_A* 2eu3_A* 2ez7_A* ...
Probab=100.00 E-value=1.2e-36 Score=231.46 Aligned_cols=96 Identities=27% Similarity=0.537 Sum_probs=88.2
Q ss_pred CCCCCCceeEecCCCCCccCCCCCCceEEeeeccCCCCccceEEEEecccccCCHHHHHHHHHhhcCCCCCCCCCCCCCC
Q psy3903 4 LCPVSGTSVPIRHLSLRSFMPETNSYMTYEGSTTHPGCWETTVWIIYNRPIYMTKQELYALRRLKQGSEEQPKAPLGNNV 83 (112)
Q Consensus 4 ~i~~~g~~~~i~~~~l~~llp~~~~yy~Y~GSLTtPpC~E~V~WiV~~~pi~iS~~Ql~~fr~l~~~~~~~~~~~~~~N~ 83 (112)
.|+.+|+.+.+..|++.+|||...+||+|.||||||||+|+|+|+||++|+.||.+||++||+++...++++...|.+|+
T Consensus 165 ~i~~~g~~~~~~~~~l~~Llp~~~~yy~Y~GSLTTPPC~E~V~W~V~~~pi~iS~~Ql~~fr~l~~~~~~~~~~~~~~N~ 244 (260)
T 3k34_A 165 SIKTKGKSADFTNFDPRGLLPESLDYWTYPGSLTTPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVDNW 244 (260)
T ss_dssp GSCSTTCEEECCSCCGGGGCCSCCCEEEEEECCSSTTCCSCEEEEEESSCEEECHHHHHHHTTCBSSCTTSCCCBCCCCC
T ss_pred hhccCCceeecCCcCHHHHcCCCCCeEEEecCccCCCCccceEEEEEeeeEEECHHHHHHHHHhhhcccCCcccccCCCC
Confidence 57788999999899999999988899999999999999999999999999999999999999998665555556799999
Q ss_pred CCCCCCCCCEEEEeee
Q psy3903 84 RPLQFIHSRTVRTNID 99 (112)
Q Consensus 84 Rp~Qpln~R~V~~~~~ 99 (112)
||+||||||.|++||.
T Consensus 245 Rp~Qpln~R~V~~sf~ 260 (260)
T 3k34_A 245 RPAQPLKNRQIKASFK 260 (260)
T ss_dssp CCCCCCCSCCCEESCC
T ss_pred CCCCCCCCCEEEeccC
Confidence 9999999999999984
No 3
>1keq_A F65A/Y131C-MI carbonic anhydrase V; proton transfer, engineered residue, lyase; HET: 4MZ; 1.88A {Mus musculus} SCOP: b.74.1.1 PDB: 1dmx_A 1dmy_A* 1urt_A
Probab=100.00 E-value=1.7e-36 Score=229.25 Aligned_cols=101 Identities=27% Similarity=0.438 Sum_probs=89.2
Q ss_pred CCCCCCceeEecCCCCCccCCCCCCceEEeeeccCCCCccceEEEEecccccCCHHHHHHHHHhhcCCCCCCCCCCCCCC
Q psy3903 4 LCPVSGTSVPIRHLSLRSFMPETNSYMTYEGSTTHPGCWETTVWIIYNRPIYMTKQELYALRRLKQGSEEQPKAPLGNNV 83 (112)
Q Consensus 4 ~i~~~g~~~~i~~~~l~~llp~~~~yy~Y~GSLTtPpC~E~V~WiV~~~pi~iS~~Ql~~fr~l~~~~~~~~~~~~~~N~ 83 (112)
.|..+|+.+.+..|++.+|||...+||+|.||||||||+|+|+|+||++|+.||.+||++||+++...+++....|.+|+
T Consensus 145 ~i~~~g~~~~~~~~~l~~Llp~~~~yy~Y~GSLTTPPC~E~V~W~V~~~pi~IS~~Ql~~fr~l~~~~~~~~~~~~~~N~ 224 (248)
T 1keq_A 145 EVRHKDTQVAMGPFDPSCLMPACRDYWTYPGSLTTPPLAESVTWIVQKTPVEVSPSQLSMFRTLLFSGRGEEEDVMVNNY 224 (248)
T ss_dssp GCCSTTCEEECCCCCGGGGSCSSCCEEEEEECCSSTTCCSCEEEEEESSCEEECHHHHHHHTTCBSSCTTSCCCBCCCCC
T ss_pred hhhccCceeEecccCHHHhCCCCCCeEEEeccccCCCCcCCeEEEEecceeeeCHHHHHHHHHhhhccccccccccCCCC
Confidence 46778999999889999999998999999999999999999999999999999999999999988665555556799999
Q ss_pred CCCCCCCCCEEEEeeecCccc
Q psy3903 84 RPLQFIHSRTVRTNIDFKQTL 104 (112)
Q Consensus 84 Rp~Qpln~R~V~~~~~~~~~~ 104 (112)
||+||||||.|+++|+.....
T Consensus 225 Rp~Qpln~R~V~~s~~~~~~~ 245 (248)
T 1keq_A 225 RPLQPLRDRKLRSSFRLDRTK 245 (248)
T ss_dssp CCCCCCTTCCEEESSCC----
T ss_pred CCCCCCCCcEEEEecCccccc
Confidence 999999999999999876543
No 4
>2foy_A Carbonic anhydrase 1; lyase, zinc, inhibitor, copper; HET: B30; 1.55A {Homo sapiens} SCOP: b.74.1.1 PDB: 1bzm_A* 1czm_A* 1azm_A 1hug_A 1huh_A 1hcb_A* 2fw4_A* 2nmx_A* 2nn1_A* 2nn7_A* 3lxe_A* 1jv0_A 1j9w_A 1crm_A 2cab_A 2it4_A
Probab=100.00 E-value=3.9e-36 Score=228.59 Aligned_cols=95 Identities=29% Similarity=0.555 Sum_probs=87.6
Q ss_pred CCCCCCceeEecCCCCCccCCCCCCceEEeeeccCCCCccceEEEEecccccCCHHHHHHHHHhhcCCCCCCCCCCCCCC
Q psy3903 4 LCPVSGTSVPIRHLSLRSFMPETNSYMTYEGSTTHPGCWETTVWIIYNRPIYMTKQELYALRRLKQGSEEQPKAPLGNNV 83 (112)
Q Consensus 4 ~i~~~g~~~~i~~~~l~~llp~~~~yy~Y~GSLTtPpC~E~V~WiV~~~pi~iS~~Ql~~fr~l~~~~~~~~~~~~~~N~ 83 (112)
.|+.+|+.+.+..|++.+|||...+||+|.||||||||+|+|+|+||++|+.||.+||++||+++...+++....|.+|+
T Consensus 166 ~i~~~g~~~~~~~~~l~~Llp~~~~yy~Y~GSLTTPPC~E~V~W~V~~~pi~iS~~Ql~~fr~l~~~~~~~~~~~~~~N~ 245 (260)
T 2foy_A 166 AIKTKGKRAPFTNFDPSTLLPSSLDFWTYPGSLTHPPLYESVTWIICKESISVSSEQLAQFRSLLSNVEGDNAVPMQHNN 245 (260)
T ss_dssp GSCSTTCEEECCSCCGGGGSCSCCCEEEEEECCSSTTCCSCEEEEEESSCEEECHHHHHHHHTSBSSCTTSCCCBCCCCC
T ss_pred hccCCCCeeEccccCHHHhCCCCCceEEEecCCCCCCCCCCeeEEEeccceecCHHHHHHHHHhhhccccccccccCCCC
Confidence 46788999999889999999998999999999999999999999999999999999999999998765555566799999
Q ss_pred CCCCCCCCCEEEEee
Q psy3903 84 RPLQFIHSRTVRTNI 98 (112)
Q Consensus 84 Rp~Qpln~R~V~~~~ 98 (112)
||+||||||.|++||
T Consensus 246 Rp~Qpln~R~V~~sf 260 (260)
T 2foy_A 246 RPTQPLKGRTVRASF 260 (260)
T ss_dssp CCCCCCTTCCCEECC
T ss_pred CCCCcCCCceEEeCC
Confidence 999999999999986
No 5
>2hfx_A Carbonic anhydrase 3; proton shuttle, HCA III, proton transfer, lyase; 1.70A {Homo sapiens} PDB: 3uyq_A 2hfw_A 1z93_A 2hfy_A 3uyn_A 1z97_A 1flj_A*
Probab=100.00 E-value=3.7e-36 Score=228.70 Aligned_cols=96 Identities=32% Similarity=0.613 Sum_probs=88.1
Q ss_pred CCCCCCceeEecCCCCCccCCCCCCceEEeeeccCCCCccceEEEEecccccCCHHHHHHHHHhhcCCCCCCCCCCCCCC
Q psy3903 4 LCPVSGTSVPIRHLSLRSFMPETNSYMTYEGSTTHPGCWETTVWIIYNRPIYMTKQELYALRRLKQGSEEQPKAPLGNNV 83 (112)
Q Consensus 4 ~i~~~g~~~~i~~~~l~~llp~~~~yy~Y~GSLTtPpC~E~V~WiV~~~pi~iS~~Ql~~fr~l~~~~~~~~~~~~~~N~ 83 (112)
.|+.+|+.+.+..|++.+|||...+||+|.||||||||+|+|+|+||++|+.||.+||++||+++...+++.+..|.+|+
T Consensus 165 ~i~~~~~~~~~~~~~l~~Llp~~~~yy~Y~GSLTTPPC~E~V~W~V~~~pi~iS~~Ql~~fr~l~~~~~~~~~~~~~~N~ 244 (260)
T 2hfx_A 165 KIKTKGKEAPFTKFDPSSLFPASRDYWTYQGSFTTPPCEECIVWLLLKEPMTVSSDQMAKLRSLLSSAENEPPVPLVSNW 244 (260)
T ss_dssp GCCSTTCEEECCSCCGGGGCCSCCCEEEEEECCSSTTCCSCEEEEEESSCEEECHHHHHHHTTCBSSCSSSSCCBCCCCC
T ss_pred hccCCCCceEeCCcCHHHHcCCCCCeEEEecCCCCCCCCCCeeEEEecccceeCHHHHHHHHHhhhccccccccccCCCC
Confidence 46788999999889999999998999999999999999999999999999999999999999998765555566799999
Q ss_pred CCCCCCCCCEEEEeee
Q psy3903 84 RPLQFIHSRTVRTNID 99 (112)
Q Consensus 84 Rp~Qpln~R~V~~~~~ 99 (112)
||+||||||.|++||.
T Consensus 245 Rp~Qpln~R~V~~sf~ 260 (260)
T 2hfx_A 245 RPPQPINNRVVRASFK 260 (260)
T ss_dssp CCCCCCTTCCCEESCC
T ss_pred CCCCCCCCCEEEeccC
Confidence 9999999999999874
No 6
>3d0n_A Carbonic anhydrase 13; lyase, metal-binding, metal binding PROT; HET: GOL; 1.55A {Homo sapiens} PDB: 3czv_A* 3da2_A*
Probab=100.00 E-value=3.1e-36 Score=229.60 Aligned_cols=96 Identities=31% Similarity=0.478 Sum_probs=87.9
Q ss_pred CCCCCCceeEecCCCCCccCCCCCCceEEeeeccCCCCccceEEEEecccccCCHHHHHHHHHhhcCCCCCCCCCCCCCC
Q psy3903 4 LCPVSGTSVPIRHLSLRSFMPETNSYMTYEGSTTHPGCWETTVWIIYNRPIYMTKQELYALRRLKQGSEEQPKAPLGNNV 83 (112)
Q Consensus 4 ~i~~~g~~~~i~~~~l~~llp~~~~yy~Y~GSLTtPpC~E~V~WiV~~~pi~iS~~Ql~~fr~l~~~~~~~~~~~~~~N~ 83 (112)
.|+.+|+.+.+..|++.+|||...+||+|.||||||||+|+|+|+||++|+.||.+||++||+++...+++....|.+|+
T Consensus 169 ~i~~~g~~~~~~~~~l~~Llp~~~~yy~Y~GSLTTPPC~E~V~W~V~~~pi~iS~~Ql~~fr~l~~~~~~~~~~~~~~N~ 248 (264)
T 3d0n_A 169 SIKEKGKQTRFTNFDLLSLLPPSWDYWTYPGSLTVPPLLESVTWIVLKQPINISSQQLAKFRSLLCTAEGEAAAFLVSNH 248 (264)
T ss_dssp GGCSBTCEEECCCCCGGGGSCSCCCEEEEEECCSSTTCCSCEEEEEESSCEEECHHHHHHHTTSBSSBTTSCCCBCCCCC
T ss_pred hccCCCCeeEccCCCHHHhCCCCCCeEEEeccCCCCCCCCCeeEEEeccceeeCHHHHHHHHHhhhccccccccccCCCC
Confidence 46678999999889999999998999999999999999999999999999999999999999998765555566799999
Q ss_pred CCCCCCCCCEEEEeee
Q psy3903 84 RPLQFIHSRTVRTNID 99 (112)
Q Consensus 84 Rp~Qpln~R~V~~~~~ 99 (112)
||+||||||.|+.||+
T Consensus 249 Rp~Qpln~R~V~~sf~ 264 (264)
T 3d0n_A 249 RPPQPLKGRKVRASFH 264 (264)
T ss_dssp CCCCCCTTCCCEESCC
T ss_pred CCCCCCCCCEEEeccC
Confidence 9999999999999884
No 7
>1rj5_A Carbonic anhydrase XIV; beta-sheet, alpha-helix, zinc enzyme, lyase; HET: NAG BMA; 2.81A {Mus musculus} SCOP: b.74.1.1 PDB: 1rj6_A*
Probab=100.00 E-value=4.5e-35 Score=222.74 Aligned_cols=94 Identities=26% Similarity=0.528 Sum_probs=83.5
Q ss_pred CCCCCCceeEecCCCCCccCCC-CCCceEEeeeccCCCCccceEEEEecccccCCHHHHHHHHH-hhcCCCCCCCCCCCC
Q psy3903 4 LCPVSGTSVPIRHLSLRSFMPE-TNSYMTYEGSTTHPGCWETTVWIIYNRPIYMTKQELYALRR-LKQGSEEQPKAPLGN 81 (112)
Q Consensus 4 ~i~~~g~~~~i~~~~l~~llp~-~~~yy~Y~GSLTtPpC~E~V~WiV~~~pi~iS~~Ql~~fr~-l~~~~~~~~~~~~~~ 81 (112)
.|+.+|+.+.+..|++.+|||. ..+||+|.||||||||+|+|+|+||++|+.||.+||++||+ |.... +..+..|.+
T Consensus 166 ~i~~~~~~~~~~~~~l~~Llp~~~~~yy~Y~GSLTTPPC~E~V~W~V~~~pi~IS~~Ql~~fr~~l~~~~-~~~~~~~~~ 244 (261)
T 1rj5_A 166 EIRYKDQKTSVPPFSVRELFPQQLEQFFRYNGSLTTPPCYQSVLWTVFNRRAQISMGQLEKLQETLSSTE-EDPSEPLVQ 244 (261)
T ss_dssp GGCSTTCEEEECCCCGGGGSCSCCSCEEEEEECCSSTTCCSCEEEEEESSCEEECHHHHHHHHSSCBSSS-SSSCCBCCC
T ss_pred hhccCCCceEecccCHHHhcccCCCCeEEEeccccCCCCcCCeEEEEeCceeecCHHHHHHHHHHhhhcc-ccccCcCCC
Confidence 4678899999999999999995 58999999999999999999999999999999999999999 54322 334557999
Q ss_pred CCCCCCCCCCCEEEEee
Q psy3903 82 NVRPLQFIHSRTVRTNI 98 (112)
Q Consensus 82 N~Rp~Qpln~R~V~~~~ 98 (112)
|+||+||||||.|+.||
T Consensus 245 N~Rp~Qpln~R~V~~sf 261 (261)
T 1rj5_A 245 NYRVPQPLNQRTIFASF 261 (261)
T ss_dssp CCCCCCCCCSCCCEECC
T ss_pred CCCCCCcCCCCEEEeCC
Confidence 99999999999999886
No 8
>2w2j_A Carbonic anhydrase-related protein; lyase, metal-binding; 1.60A {Homo sapiens}
Probab=100.00 E-value=4.2e-35 Score=226.15 Aligned_cols=96 Identities=28% Similarity=0.539 Sum_probs=85.1
Q ss_pred CCCCCCceeEecCCCCCccCCCCC--CceEEeeeccCCCCccceEEEEecccccCCHHHHHHHHHhhcCCCCCCC-----
Q psy3903 4 LCPVSGTSVPIRHLSLRSFMPETN--SYMTYEGSTTHPGCWETTVWIIYNRPIYMTKQELYALRRLKQGSEEQPK----- 76 (112)
Q Consensus 4 ~i~~~g~~~~i~~~~l~~llp~~~--~yy~Y~GSLTtPpC~E~V~WiV~~~pi~iS~~Ql~~fr~l~~~~~~~~~----- 76 (112)
.|..+|+.+.+..|++.+|||... +||+|.||||||||+|+|+|+||++|+.||.+||++||+++....++..
T Consensus 189 ~i~~~g~~~~~~~~~l~~Llp~~~~~~yy~Y~GSLTTPPC~E~V~W~V~~~pi~IS~~Ql~~fr~l~~~~~~~~~~~~~~ 268 (291)
T 2w2j_A 189 DIQYKGKSKTIPCFNPNTLLPDPLLRDYWVYEGSLTIPPCSEGVTWILFRYPLTISQLQIEEFRRLRTHVKGAELVEGCD 268 (291)
T ss_dssp GGCSTTEEEEESCBCGGGGSCCTTCCCEEEEEEECSSTTCCEEEEEEEESSCEEECHHHHHHHTTCBSSCTTCCCCTTCC
T ss_pred hcccCCceeEecccCHHHhCCCCCCCCeEEEeccccCCCCCCCeEEEEecceeecCHHHHHHHHHhhhcccccccccccc
Confidence 466789999998899999999766 9999999999999999999999999999999999999998865433221
Q ss_pred CCCCCCCCCCCCCCCCEEEEeee
Q psy3903 77 APLGNNVRPLQFIHSRTVRTNID 99 (112)
Q Consensus 77 ~~~~~N~Rp~Qpln~R~V~~~~~ 99 (112)
..|.+|+||+||||||.|+.||+
T Consensus 269 ~~~~~N~Rp~Qpln~R~V~~sf~ 291 (291)
T 2w2j_A 269 GILGDNFRPTQPLSDRVIRAAFQ 291 (291)
T ss_dssp SBCCSCCCCCCCCTTCCCEESCC
T ss_pred ccccCCCCCCCCCCCCEEEeCCC
Confidence 46899999999999999999874
No 9
>1jd0_A Carbonic anhydrase XII; extracellular domain, bitopic protein, type I membrane protein, lyase; HET: AZM; 1.50A {Homo sapiens} SCOP: b.74.1.1 PDB: 1jcz_A*
Probab=100.00 E-value=1.4e-34 Score=220.40 Aligned_cols=96 Identities=24% Similarity=0.480 Sum_probs=84.5
Q ss_pred CCCCCCceeEecCCCCCccCCCC-CCceEEeeeccCCCCccceEEEEecccccCCHHHHHHHHHhhcCC--CCCCCCCCC
Q psy3903 4 LCPVSGTSVPIRHLSLRSFMPET-NSYMTYEGSTTHPGCWETTVWIIYNRPIYMTKQELYALRRLKQGS--EEQPKAPLG 80 (112)
Q Consensus 4 ~i~~~g~~~~i~~~~l~~llp~~-~~yy~Y~GSLTtPpC~E~V~WiV~~~pi~iS~~Ql~~fr~l~~~~--~~~~~~~~~ 80 (112)
.|+.+|+.+.+..|++.+|||.. .+||+|.||||||||+|+|+|+||++|+.||.+||++||+++... .+..+..|.
T Consensus 164 ~i~~~~~~~~~~~~~l~~Llp~~~~~yy~Y~GSLTTPPC~E~V~W~V~~~pi~iS~~Ql~~fr~~l~~~~~~~~~~~~~~ 243 (263)
T 1jd0_A 164 HVKYKGQEAFVPGFNIEELLPERTAEYYRYRGSLTTPPCNPTVLWTVFRNPVQISQEQLLALETALYCTHMDDPSPREMI 243 (263)
T ss_dssp GSCSTTCEEEEECCBGGGGSCSCTTCEEEEEECCSSTTCCSCEEEEEESSCEEECHHHHHHHHHSCBSSCTTCSSCCBCC
T ss_pred hcccCCceeecCCCCHHHHcCcCCCceEEEeeecCCCCCcCceEEeecCEEeEcCHHHHHHHHHhhhhccccccccccCC
Confidence 46678999999899999999975 799999999999999999999999999999999999999876432 223345689
Q ss_pred CCCCCCCCCCCCEEEEeee
Q psy3903 81 NNVRPLQFIHSRTVRTNID 99 (112)
Q Consensus 81 ~N~Rp~Qpln~R~V~~~~~ 99 (112)
+|+||+||||||.|+++|.
T Consensus 244 ~N~Rp~Qpln~R~V~~s~~ 262 (263)
T 1jd0_A 244 NNFRQVQKFDERLVYTSFS 262 (263)
T ss_dssp CCCCCCCCCCSCCEEESCC
T ss_pred CCCCCCCCCCCCEEEEccC
Confidence 9999999999999999885
No 10
>3iai_A Carbonic anhydrase 9; transmembrane proteins, cell membrane, projection, disulfide bond, glycoprotein, lyase, membrane, binding, nucleus; HET: AZM NAG BMA MAN; 2.20A {Homo sapiens} SCOP: b.74.1.0
Probab=100.00 E-value=1e-34 Score=220.60 Aligned_cols=92 Identities=23% Similarity=0.503 Sum_probs=82.8
Q ss_pred CCCCCCceeEecCCCCCccCCCC-CCceEEeeeccCCCCccceEEEEecccccCCHHHHHHHHHhhcCCCCCCCCCCCCC
Q psy3903 4 LCPVSGTSVPIRHLSLRSFMPET-NSYMTYEGSTTHPGCWETTVWIIYNRPIYMTKQELYALRRLKQGSEEQPKAPLGNN 82 (112)
Q Consensus 4 ~i~~~g~~~~i~~~~l~~llp~~-~~yy~Y~GSLTtPpC~E~V~WiV~~~pi~iS~~Ql~~fr~l~~~~~~~~~~~~~~N 82 (112)
.|..+|+.+.+.+|++.+|||.. .+||+|.||||||||+|+|+|+||++||.||.+||++||.++.... ...|.+|
T Consensus 164 ~i~~~~~~~~~~~~~l~~Llp~~~~~yy~Y~GSLTTPPC~E~V~W~V~~~pi~iS~~Ql~~f~~~l~~~~---~~~l~~N 240 (257)
T 3iai_A 164 EIAEEGSETQVPGLDISALLPSDFSRYFQYEGSLTTPPCAQGVIWTVFNQTVMLSAKQLHTLSDTLWGPG---DSRLQLN 240 (257)
T ss_dssp GGCSTTCEEEECCCBGGGGSCSCTTCEEEEEEECSSTTCCEEEEEEEESSCEEECHHHHHHHHHSCBCST---TCBSCCC
T ss_pred hccCCCCeEEcCCcCHHHHcCccCCCeEEEeccccCCCccCcEEEEEeeeeeEECHHHHHHHHHHhhccc---CcccCCC
Confidence 46788999999999999999965 5899999999999999999999999999999999999998765432 2458999
Q ss_pred CCCCCCCCCCEEEEee
Q psy3903 83 VRPLQFIHSRTVRTNI 98 (112)
Q Consensus 83 ~Rp~Qpln~R~V~~~~ 98 (112)
+||+||||||.|++||
T Consensus 241 ~Rp~Qpln~R~V~~sf 256 (257)
T 3iai_A 241 FRATQPLNGRVIEASF 256 (257)
T ss_dssp CCCCCCCTTCCCEESC
T ss_pred cCCCCCCCCCEEEecC
Confidence 9999999999999987
No 11
>3fw3_A Carbonic anhydrase 4; structure-based drug design. small molecule complex. CO-CRYS membrane, disease mutation, glycoprotein, GPI-anchor; HET: ETS GLC; 1.72A {Homo sapiens} SCOP: b.74.1.1 PDB: 1znc_A* 3f7b_A* 3f7u_A*
Probab=100.00 E-value=1.4e-34 Score=220.75 Aligned_cols=93 Identities=30% Similarity=0.530 Sum_probs=83.2
Q ss_pred CCCCCCceeEecCCCCCccCCC---CCCceEEeeeccCCCCccceEEEEecccccCCHHHHHHHHHhhcCCCCCCCCCCC
Q psy3903 4 LCPVSGTSVPIRHLSLRSFMPE---TNSYMTYEGSTTHPGCWETTVWIIYNRPIYMTKQELYALRRLKQGSEEQPKAPLG 80 (112)
Q Consensus 4 ~i~~~g~~~~i~~~~l~~llp~---~~~yy~Y~GSLTtPpC~E~V~WiV~~~pi~iS~~Ql~~fr~l~~~~~~~~~~~~~ 80 (112)
.|+.+|+.+.+.+|++.+|||. ..+||+|.||||||||+|+|+|+||++|+.||.+||++||+++...++ .+..|.
T Consensus 171 ~i~~~~~~~~~~~~~l~~Llp~~~~~~~yy~Y~GSLTTPPC~E~V~W~V~~~pi~iS~~Ql~~fr~~l~~~~~-~~~~~~ 249 (266)
T 3fw3_A 171 NIPKPEMSTTMAESSLLDLLPKEEKLRHYFRYLGSLTTPTCDEKVVWTVFREPIQLHREQILAFSQKLYYDKE-QTVSMK 249 (266)
T ss_dssp GCCSTTCEEECCSBCSGGGSCCGGGGSCEEEEEECCSSTTCCSCEEEEEESSCEEEEHHHHHHHHHHCBSSTT-CCSBCC
T ss_pred hcccCCceeeecCCCHHHHCCCccCCCCeEEEeccccCCCCccceEEEEecceeEECHHHHHHHHHHhhcccc-ccCccC
Confidence 5788999999989999999997 479999999999999999999999999999999999999997654332 245799
Q ss_pred CCCCCCCCCCCCEEEEe
Q psy3903 81 NNVRPLQFIHSRTVRTN 97 (112)
Q Consensus 81 ~N~Rp~Qpln~R~V~~~ 97 (112)
+||||+||||||.|++|
T Consensus 250 ~N~Rp~QpLn~R~V~~s 266 (266)
T 3fw3_A 250 DNVRPLQQLGQRTVIKS 266 (266)
T ss_dssp CCCCCCCCCTTCCCEEC
T ss_pred CcCCCCCCCCCCeEEeC
Confidence 99999999999999875
No 12
>3jxf_A Receptor-type tyrosine-protein phosphatase zeta; Ca-like domain, alternative splicing, glycoprotein, hydrolase, membrane, polymorphism; 2.00A {Homo sapiens} SCOP: b.74.1.0 PDB: 3s97_A*
Probab=100.00 E-value=9.6e-35 Score=222.41 Aligned_cols=96 Identities=23% Similarity=0.411 Sum_probs=83.9
Q ss_pred CCCCCCceeEecCCCCCccCCCC-CCceEEeeeccCCCCccceEEEEecccccCCHHHHHHHHHhhcCCCCCCC---CCC
Q psy3903 4 LCPVSGTSVPIRHLSLRSFMPET-NSYMTYEGSTTHPGCWETTVWIIYNRPIYMTKQELYALRRLKQGSEEQPK---APL 79 (112)
Q Consensus 4 ~i~~~g~~~~i~~~~l~~llp~~-~~yy~Y~GSLTtPpC~E~V~WiV~~~pi~iS~~Ql~~fr~l~~~~~~~~~---~~~ 79 (112)
.|+.+|+++.+.+|++.+|||.. .+||+|.||||||||+|+|+|+||++|+.||.+||++||+++........ ..|
T Consensus 172 ~i~~~g~~~~~~~~~l~~Llp~~~~~yy~Y~GSLTTPPC~E~V~W~V~~~pi~iS~~Ql~~fr~l~~~~~~~~~~~~~~l 251 (272)
T 3jxf_A 172 SVSRFGKQAALDPFILLNLLPNSTDKYYIYNGSLTSPPCTDTVDWIVFKDTVSISESQLAVFCEVLTMQQSGYVMLMDYL 251 (272)
T ss_dssp HTCSTTCEEECCCCBGGGGSCSCCSSEEEEEECCSSTTCCSCEEEEEESSCEEECHHHHHGGGGCEEEEEETTEEEEEEC
T ss_pred hhhccCceeccCCCCHHHhCCCCCCCeEEEeccccCCCCcCcEEEEEeecccEeCHHHHHHHHHHhhccccCcccccccc
Confidence 36778999999899999999964 68999999999999999999999999999999999999998864321111 248
Q ss_pred CCCCCCCCCCCCCEEEEeee
Q psy3903 80 GNNVRPLQFIHSRTVRTNID 99 (112)
Q Consensus 80 ~~N~Rp~Qpln~R~V~~~~~ 99 (112)
.+||||+|||++|.|++||.
T Consensus 252 ~~N~Rp~Qpl~~R~V~~s~~ 271 (272)
T 3jxf_A 252 QNNFREQQYKFSRQVFSSYT 271 (272)
T ss_dssp CCCCCCCCCCTTCCCEECCC
T ss_pred cCCCCCCCCCCCCEEEEecc
Confidence 99999999999999999985
No 13
>3jxg_A Receptor-type tyrosine-protein phosphatase gamma; Ca-like domain, glycoprotein, hydrolase, membrane, phosphoprotein, transmembrane, cell adhesion; 1.70A {Mus musculus} SCOP: b.74.1.0 PDB: 3kld_B* 3jxh_C
Probab=100.00 E-value=2.7e-34 Score=219.47 Aligned_cols=94 Identities=28% Similarity=0.477 Sum_probs=81.2
Q ss_pred CCCCCCceeEecCCCCCccCCCC-CCceEEeeeccCCCCccceEEEEecccccCCHHHHHHHHHhhcCCCCCC---CCCC
Q psy3903 4 LCPVSGTSVPIRHLSLRSFMPET-NSYMTYEGSTTHPGCWETTVWIIYNRPIYMTKQELYALRRLKQGSEEQP---KAPL 79 (112)
Q Consensus 4 ~i~~~g~~~~i~~~~l~~llp~~-~~yy~Y~GSLTtPpC~E~V~WiV~~~pi~iS~~Ql~~fr~l~~~~~~~~---~~~~ 79 (112)
.|+.+|+.+.+.+|++.+|||.. .+||+|.||||||||+|+|+|+||++|+.||.+||++||+|+...++++ ...|
T Consensus 172 ~i~~~~~~~~~~~~~l~~LLp~~~~~Yy~Y~GSLTTPPC~E~V~W~V~~~pi~IS~~Ql~~fr~l~~~~~~~~~~~~~~~ 251 (269)
T 3jxg_A 172 GVVHHEKETFLDPFILRDLLPASLGSYYRYTGSLTTPPCSEIVEWIVFRRPVPISYHQLEAFYSIFTTEQQDHVKSVEYL 251 (269)
T ss_dssp TCCSTTCEEECCCCBGGGGSCSCTTCEEEEEECCSSTTCCSCEEEEEESSCEEECHHHHHHHHTCEEEC------CEEEC
T ss_pred hccCCCceeEcCCCCHHHHCCCCCCCEEEEeccccCCCccCcEEEEEecccceeCHHHHHHHHHHhhccccccccccccc
Confidence 46778888889899999999976 5899999999999999999999999999999999999999876433211 2358
Q ss_pred CCCCCCCCCCCCCEEEEe
Q psy3903 80 GNNVRPLQFIHSRTVRTN 97 (112)
Q Consensus 80 ~~N~Rp~Qpln~R~V~~~ 97 (112)
.+||||+||||||.|++|
T Consensus 252 ~~N~Rp~QpLn~R~V~~s 269 (269)
T 3jxg_A 252 RNNFRPQQALNDRVVSKS 269 (269)
T ss_dssp CCCCCCCCCCTTCCCEEC
T ss_pred CCCCCCCCCCCCCEEeeC
Confidence 999999999999999875
No 14
>3fe4_A Carbonic anhydrase 6; secretion, metal binding, structural GEN structural genomics consortium, SGC, glycoprotein, lyase, M binding, secreted; 1.90A {Homo sapiens} SCOP: b.74.1.0
Probab=100.00 E-value=2.8e-34 Score=220.42 Aligned_cols=95 Identities=21% Similarity=0.425 Sum_probs=83.8
Q ss_pred CCCCCCceeEecCCCCCccCCCC-CCceEEeeeccCCCCccceEEEEecccccCCHHHHHHHHHhhcCCCCCCCCCCCCC
Q psy3903 4 LCPVSGTSVPIRHLSLRSFMPET-NSYMTYEGSTTHPGCWETTVWIIYNRPIYMTKQELYALRRLKQGSEEQPKAPLGNN 82 (112)
Q Consensus 4 ~i~~~g~~~~i~~~~l~~llp~~-~~yy~Y~GSLTtPpC~E~V~WiV~~~pi~iS~~Ql~~fr~l~~~~~~~~~~~~~~N 82 (112)
.|+.+|+.+.+.+|++.+|||.. .+||+|.||||||||+|+|+|+||++||.||.+||++||+++.... ...+.+|
T Consensus 167 ~i~~~g~~~~~~~~~l~~LLp~~~~~yy~Y~GSLTTPPC~E~V~W~V~~~pi~iS~~Ql~~fr~~l~~~~---~~~~~nN 243 (278)
T 3fe4_A 167 NIKYPGQRTTLTGLDVQDMLPRNLQHYYTYHGSLTTPPCTENVHWFVLADFVKLSRTQVWKLENSLLDHR---NKTIHND 243 (278)
T ss_dssp GGCSTTCEEEEEEECHHHHSCSCCSCEEEEEECCSSTTCCSCEEEEEESSCEECCHHHHHHHHHSCBCTT---SSBCCCC
T ss_pred hcccCCceeeecCCCHHHhCCCCCCCeEEEeccCCCCCccccEEEEEeeeeeEECHHHHHHHHHHhcccC---CcccCCC
Confidence 57788999999899999999965 6899999999999999999999999999999999999999765432 2358889
Q ss_pred CCCCCCCCCCEEEEeeecC
Q psy3903 83 VRPLQFIHSRTVRTNIDFK 101 (112)
Q Consensus 83 ~Rp~Qpln~R~V~~~~~~~ 101 (112)
+||+||||||.|+++|...
T Consensus 244 ~Rp~QpLn~R~V~~sf~~~ 262 (278)
T 3fe4_A 244 YRRTQPLNHRVVESNFPNQ 262 (278)
T ss_dssp CCCCCCCTTCCCEESCC--
T ss_pred CcCCCCCCCCEEEEeCccc
Confidence 9999999999999998753
No 15
>2znc_A Carbonic anhydrase IV; lyase, zinc, murine, membrane; 2.80A {Mus musculus} SCOP: b.74.1.1 PDB: 3znc_A*
Probab=100.00 E-value=1.1e-33 Score=214.74 Aligned_cols=94 Identities=30% Similarity=0.547 Sum_probs=81.7
Q ss_pred CCCCCCceeEecCCCCCccCCCC---CCceEEeeeccCCCCccceEEEEecccccCCHHHHHHHHHhhcCCCCCCCCCCC
Q psy3903 4 LCPVSGTSVPIRHLSLRSFMPET---NSYMTYEGSTTHPGCWETTVWIIYNRPIYMTKQELYALRRLKQGSEEQPKAPLG 80 (112)
Q Consensus 4 ~i~~~g~~~~i~~~~l~~llp~~---~~yy~Y~GSLTtPpC~E~V~WiV~~~pi~iS~~Ql~~fr~l~~~~~~~~~~~~~ 80 (112)
.|+.+|+.+.+.++++.+|||.. .+||+|.||||||||+|+|+|+||++|+.||.+||++||+++.-..+ .+..|.
T Consensus 161 ~i~~~~~~~~~~~~~l~~Llp~~~~~~~yy~Y~GSLTTPPC~E~V~W~V~~~pi~iS~~Ql~~fr~~l~~~~~-~~~~~~ 239 (258)
T 2znc_A 161 SISKPHSTSTVRESSLQDMLPPSTKMYTYFRYNGSLTTPNCDETVIWTVYKQPIKIHKNQFLEFSKNLYYDED-QKLNMK 239 (258)
T ss_dssp GSCSTTCEEEEEEECSGGGSCCGGGCSCEEEEEECCSSTTCCSCEEEEEESSCEEEEHHHHHHHHHHCBSSTT-CCSBCC
T ss_pred hcccCCCceecCCCCHHHhcCCCCCCCceEEEeccccCCCCcCCeEEEEeccccccCHHHHHHHHhhhccccc-cccccC
Confidence 57788999999889999999975 47999999999999999999999999999999999999996542221 234689
Q ss_pred CCCCCCCCCCCCEEEEee
Q psy3903 81 NNVRPLQFIHSRTVRTNI 98 (112)
Q Consensus 81 ~N~Rp~Qpln~R~V~~~~ 98 (112)
+|+||+||||+|.|++++
T Consensus 240 ~N~Rp~Qpln~R~V~~s~ 257 (258)
T 2znc_A 240 DNVRPLQPLGKRQVFKSH 257 (258)
T ss_dssp CCCCCCCCCTTCCCEESC
T ss_pred CCCCCCCcCCCCEEEecC
Confidence 999999999999999864
No 16
>1kop_A Carbonic anhydrase; lyase, structural trimming; 1.90A {Neisseria gonorrhoeae} SCOP: b.74.1.1 PDB: 1koq_A
Probab=99.97 E-value=3.7e-32 Score=202.85 Aligned_cols=77 Identities=22% Similarity=0.400 Sum_probs=70.3
Q ss_pred CceeEecCCCCCccCCCCCCceEEeeeccCCCCccceEEEEecccccCCHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCC
Q psy3903 9 GTSVPIRHLSLRSFMPETNSYMTYEGSTTHPGCWETTVWIIYNRPIYMTKQELYALRRLKQGSEEQPKAPLGNNVRPLQF 88 (112)
Q Consensus 9 g~~~~i~~~~l~~llp~~~~yy~Y~GSLTtPpC~E~V~WiV~~~pi~iS~~Ql~~fr~l~~~~~~~~~~~~~~N~Rp~Qp 88 (112)
|+.+.+..|++.+|||...+||+|.||||||||+|+|+|+||++|+.||.+||++||+++.. +|+||+||
T Consensus 146 ~~~~~~~~~~~~~Llp~~~~yy~Y~GSLTTPPC~E~V~W~V~~~pi~iS~~Ql~~fr~l~~~----------~N~Rp~Qp 215 (223)
T 1kop_A 146 GKVKLNQPFDASTLLPKRLKYYRFAGSLTTPPCTEGVSWLVLKTYDHIDQAQAEKFTRAVGS----------ENNRPVQP 215 (223)
T ss_dssp EEEECSSCBCGGGGSCSCCCEEEEEEECSSTTCCEEEEEEEESSCEEECHHHHHHHHHHHSS----------CCCCCCCC
T ss_pred CceeecCccCHHHHCCCCCCeEEEeCcccCCCCCCCeeEEEeccccEeCHHHHHHHHHHccC----------CCCCCCCc
Confidence 44555667999999999899999999999999999999999999999999999999998741 69999999
Q ss_pred CCCCEEE
Q psy3903 89 IHSRTVR 95 (112)
Q Consensus 89 ln~R~V~ 95 (112)
||||.|+
T Consensus 216 ln~R~V~ 222 (223)
T 1kop_A 216 LNARVVI 222 (223)
T ss_dssp CTTCCCB
T ss_pred CCCCeEe
Confidence 9999986
No 17
>1y7w_A Halotolerant alpha-type carbonic anhydrase (DCA I; haltolerant protein, algal Ca anhydrase, salt tolerant protein, zinc enzyme; 1.86A {Dunaliella salina}
Probab=99.97 E-value=6.4e-32 Score=208.17 Aligned_cols=90 Identities=24% Similarity=0.451 Sum_probs=77.5
Q ss_pred CCCCCCceeEecCCCC-CccCCCCCCceEEeeeccCCCCccceEEEEecccccCCHHHHHHHHHhhcCCCCCCCCCCCCC
Q psy3903 4 LCPVSGTSVPIRHLSL-RSFMPETNSYMTYEGSTTHPGCWETTVWIIYNRPIYMTKQELYALRRLKQGSEEQPKAPLGNN 82 (112)
Q Consensus 4 ~i~~~g~~~~i~~~~l-~~llp~~~~yy~Y~GSLTtPpC~E~V~WiV~~~pi~iS~~Ql~~fr~l~~~~~~~~~~~~~~N 82 (112)
.+++.++.+.+..|++ .+|||...+||+|.||||||||+|+|+|+||++|+.||.+||++||+++..... ..+.+|
T Consensus 198 ~~~~~~~~~~~~~~~~~~~LlP~~~~yy~Y~GSLTTPPC~E~V~W~V~~~pi~iS~~Ql~~fr~l~~~~~~---~~~~~N 274 (291)
T 1y7w_A 198 TASYGDTGVSIDNINVKTQLLPSSLKYAGYDGSLTTPGCDERVKWHVFTTPREVTREQMKLFVDVTMGAHA---GADVVN 274 (291)
T ss_dssp SCCTTCCSEECCCEEHHHHTSCSCCCEEEEEECCSSTTCCSCEEEEEESSCEEECHHHHHHHHHHHHHHCT---TCCSSC
T ss_pred ccccCCceeEecccChHHHhCCCCCCeEEEeccccCCCCcCCeEEEEecceeecCHHHHHHHHHhhhcccc---CCccCC
Confidence 3455677888888888 479999999999999999999999999999999999999999999998642211 247789
Q ss_pred CCCCCCCCCCEEEE
Q psy3903 83 VRPLQFIHSRTVRT 96 (112)
Q Consensus 83 ~Rp~Qpln~R~V~~ 96 (112)
+||+||||||.|+.
T Consensus 275 ~Rp~Qpln~R~V~~ 288 (291)
T 1y7w_A 275 NRMIQDLGDREVYK 288 (291)
T ss_dssp CCCCCCCTTCCCEE
T ss_pred CCCCCCCCCCEEEE
Confidence 99999999999986
No 18
>4e9o_X D8L antigen, IMV membrane protein; CAH alpha fold, VP7 motif, beta sheet, cell surface chondroi binding, viral entry, chondroitin sulfate; 1.42A {Vaccinia virus} PDB: 4etq_X
Probab=99.97 E-value=1.2e-31 Score=205.10 Aligned_cols=102 Identities=24% Similarity=0.294 Sum_probs=81.6
Q ss_pred CCCCCCceeEe-cCCCCCccCCCCCCceEEeeeccCCCCccceEEEEecccccCCHHHHHHHHHhhcCC--CCCCCCCCC
Q psy3903 4 LCPVSGTSVPI-RHLSLRSFMPETNSYMTYEGSTTHPGCWETTVWIIYNRPIYMTKQELYALRRLKQGS--EEQPKAPLG 80 (112)
Q Consensus 4 ~i~~~g~~~~i-~~~~l~~llp~~~~yy~Y~GSLTtPpC~E~V~WiV~~~pi~iS~~Ql~~fr~l~~~~--~~~~~~~~~ 80 (112)
.|+.+|+++.+ ..|++.+|||...+||+|.|| ||||+|+|+|+||++|+.||.+||++||+++... ++++ ..|.
T Consensus 140 ~i~~~g~~~~~~~~~~l~~Llp~~~~yy~Y~GS--TPPC~E~V~W~V~~~pi~IS~~Ql~~fr~l~~~~~~~~~~-~~~~ 216 (269)
T 4e9o_X 140 SIRSANTSAPFDSVFYLDNLLPSKLDYFTYLGT--TINHSADAVWIIFPTPINIHSDQLSKFRTLLSLSNHEGKP-HYIT 216 (269)
T ss_dssp GGCSSSEEEECCSCCCGGGGSCSCCCCEEEEEE--CTTSSSEEEEEEEEEEEEECHHHHHGGGGSBCCC---CCC-CBCC
T ss_pred HhccCCCeEEecCCcCHHHHcCCCCCeEEECCC--CCCCCCCEEEEEecccceeCHHHHHHHHHHhhcccccCcc-CcCC
Confidence 46788999999 679999999988899999999 9999999999999999999999999999998654 3333 6699
Q ss_pred CCCCCCCCCCCCEEEEeeecCccccccc
Q psy3903 81 NNVRPLQFIHSRTVRTNIDFKQTLTQCF 108 (112)
Q Consensus 81 ~N~Rp~Qpln~R~V~~~~~~~~~~~~c~ 108 (112)
+|+||+||||||.|.+.-..+.....|+
T Consensus 217 ~N~Rp~QpLn~R~V~~~~~~~~~~~~~~ 244 (269)
T 4e9o_X 217 ENYRNPYKLNDDTEVYYSGEIIRAATTS 244 (269)
T ss_dssp CCCCCCCCCCTTCCCEEC----------
T ss_pred CCcCCCCCCCCcEEEEeCCcccccccCC
Confidence 9999999999999876555544444443
No 19
>3q31_A Carbonic anhydrase; glysosy secreted, dimeric, lyase; HET: NAG; 2.70A {Aspergillus oryzae}
Probab=99.96 E-value=1.3e-30 Score=196.82 Aligned_cols=81 Identities=23% Similarity=0.365 Sum_probs=74.5
Q ss_pred CCCCCCceeEecCCCCCccCC--CCCCceEEeeeccCCCCccceEEEEecccccCCHHHHHHHHHhhcCCCCCCCCCCCC
Q psy3903 4 LCPVSGTSVPIRHLSLRSFMP--ETNSYMTYEGSTTHPGCWETTVWIIYNRPIYMTKQELYALRRLKQGSEEQPKAPLGN 81 (112)
Q Consensus 4 ~i~~~g~~~~i~~~~l~~llp--~~~~yy~Y~GSLTtPpC~E~V~WiV~~~pi~iS~~Ql~~fr~l~~~~~~~~~~~~~~ 81 (112)
.|+.+|+.+.+..|++.+|+| +..+||+|.||||||||+|+|+|+||++|+.||.+||++||+++ ..
T Consensus 154 ~i~~~g~~~~~~~~~~~~Ll~~~~~~~yy~Y~GSLTTPPC~E~V~W~V~~~pi~iS~~Ql~~fr~l~-----------~~ 222 (244)
T 3q31_A 154 NIPDAGTSTTTGQLDFGGLLDHFNRHGVYQYTGSLTTPPCTEEVMWNLSTEPLPLTVQGYNKVKKII-----------KY 222 (244)
T ss_dssp GCCSTTCEEECCCBCCHHHHHHHHHSCEEEEEEECSSTTCCEEEEEEEESSCEEECHHHHHHHHHHH-----------CC
T ss_pred hhcCCCCceecCCcCHHHHhcccccCCEEEEcccCcCCCccccEEEEEEeeeeEECHHHHHHHHHHh-----------cC
Confidence 477889999888899999997 46899999999999999999999999999999999999999985 47
Q ss_pred CCCCCCCCCCCEEE
Q psy3903 82 NVRPLQFIHSRTVR 95 (112)
Q Consensus 82 N~Rp~Qpln~R~V~ 95 (112)
|+||+||++||.+.
T Consensus 223 N~Rp~Q~~~gr~nl 236 (244)
T 3q31_A 223 NARYTQNALGQDNL 236 (244)
T ss_dssp CCCCCCCCTTSCCT
T ss_pred CCCCCcCCCCccCH
Confidence 99999999999864
No 20
>3b1b_A Carbonic anhydrase 1; N-glycosylation, zinc-finger, lyase; HET: NAG; 1.88A {Chlamydomonas reinhardtii}
Probab=99.95 E-value=2.4e-29 Score=199.89 Aligned_cols=84 Identities=26% Similarity=0.505 Sum_probs=71.2
Q ss_pred ecCCCCCccCCCCCCceEEeeeccCCCCccceEEEEecccccCCHHHHHHHHHhh-------------------------
Q psy3903 14 IRHLSLRSFMPETNSYMTYEGSTTHPGCWETTVWIIYNRPIYMTKQELYALRRLK------------------------- 68 (112)
Q Consensus 14 i~~~~l~~llp~~~~yy~Y~GSLTtPpC~E~V~WiV~~~pi~iS~~Ql~~fr~l~------------------------- 68 (112)
+..|++.+|||+..+||+|.||||||||+|+|+|+||++|+.||.+||++||+++
T Consensus 237 ~~~~~l~~LLP~~~~Yy~Y~GSLTTPPCsE~V~WiVf~~pi~IS~~Ql~~fr~ll~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (377)
T 3b1b_A 237 GTTIKLGELLPSDRDYVTYEGSLTTPPCSEGLLWHVMTQPQRISFGQWNRYRLAVGLKECNSTETAADAGHHHHHRRLLH 316 (377)
T ss_dssp TCEECHHHHSCSSCCEEEEEEECSSTTCCEEEEEEEESSCEEEEHHHHHHHHHHTCEEEEC-------------------
T ss_pred cCCcCHHHHcCCCCCeEEEecccCCCCCCCCeEEEEeCcccccCHHHHHHHHHHhcccCCCcccccccccCCccccchhh
Confidence 4559999999998999999999999999999999999999999999999999953
Q ss_pred -----------------------cCCCCCCC------CCCCCCCCCCCCCCCCEEEEe
Q psy3903 69 -----------------------QGSEEQPK------APLGNNVRPLQFIHSRTVRTN 97 (112)
Q Consensus 69 -----------------------~~~~~~~~------~~~~~N~Rp~Qpln~R~V~~~ 97 (112)
....+++. ..|.+||||+|++|||.|+..
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~r~~q~~~~r~~~~~ 374 (377)
T 3b1b_A 317 NHAHLEEVPAATSEPKHYFRRVMLAESANPDAYTCKAVAFGQNFRNPQYANGRTIKLA 374 (377)
T ss_dssp ----------------------------CGGGCCEEEEECCCCCCCCBCCTTCCEEEE
T ss_pred hhhhhccCCccccCchhhHHHHHhcccCCCccccccccccccCcCCCccccCceeeee
Confidence 22112222 268999999999999999874
No 21
>4fmh_A VP1; viral capsid protein, jelly roll, encapsidation, receptor BI sialylated oligosaccharides, viral protein; HET: SIA GAL; 1.85A {Merkel cell polyomavirus} PDB: 4fmg_A* 4fmi_A* 4fmj_A*
Probab=47.10 E-value=11 Score=28.59 Aligned_cols=34 Identities=9% Similarity=0.360 Sum_probs=23.3
Q ss_pred CCceeEecC---CCCCccCCC-----CCCce-EEeeeccCCCC
Q psy3903 8 SGTSVPIRH---LSLRSFMPE-----TNSYM-TYEGSTTHPGC 41 (112)
Q Consensus 8 ~g~~~~i~~---~~l~~llp~-----~~~yy-~Y~GSLTtPpC 41 (112)
+...+.+.. +.++.+-|| +..|| +|.|..+|||-
T Consensus 183 p~~Ka~ldkdg~yPVE~W~PDPsrNENtRYFG~~tGG~~TPPV 225 (289)
T 4fmh_A 183 PQAKAKLDKDGNYPIEVWCPDPSKNENSRYYGSIQTGSQTPTV 225 (289)
T ss_dssp TTCEEEECSTTCSBTTTEEECTTSCTTEEEEEEEECSSSCCCE
T ss_pred chhheeeccCCccceEEECCCCCcCcCceeeeEecCCCCCCCe
Confidence 344445543 777778774 34566 99999999994
No 22
>3s7v_A Major capsid protein VP1; jelly-roll, antiparallel beta sandwich, major capsid protein protein; 2.55A {Ki polyomavirus} PDB: 3s7x_A
Probab=37.99 E-value=20 Score=26.91 Aligned_cols=25 Identities=24% Similarity=0.513 Sum_probs=18.2
Q ss_pred CCCCccCCC-----CCCce-EEeeeccCCCC
Q psy3903 17 LSLRSFMPE-----TNSYM-TYEGSTTHPGC 41 (112)
Q Consensus 17 ~~l~~llp~-----~~~yy-~Y~GSLTtPpC 41 (112)
+.++.+-|| +..|| +|.|..+|||-
T Consensus 187 yPVE~W~pDPskNENtRYFG~~tGG~~TPPV 217 (277)
T 3s7v_A 187 YSVESWAPDPSRNDNCRYFGRVVGGAATPPV 217 (277)
T ss_dssp CBTTTEEECTTSCCSEEEEEEEECCSSCCCE
T ss_pred CceEEECCCCCcCcCceeeEEecCCCCCCCe
Confidence 566666663 34566 89999999994
No 23
>1vps_A Polyomavirus VP1 pentamer; virus coat protein, oligosaccharide binding, virus assembly, acid, viral protein; HET: SIA GAL NAG; 1.90A {Murine polyomavirus} SCOP: b.121.6.1 PDB: 1vpn_A* 1cn3_A
Probab=37.54 E-value=19 Score=27.19 Aligned_cols=25 Identities=28% Similarity=0.660 Sum_probs=19.2
Q ss_pred CCCCccCCC-----CCCce-EEeeeccCCCC
Q psy3903 17 LSLRSFMPE-----TNSYM-TYEGSTTHPGC 41 (112)
Q Consensus 17 ~~l~~llp~-----~~~yy-~Y~GSLTtPpC 41 (112)
+.++.+.|| +..|| +|.|.++|||-
T Consensus 191 yPVE~W~PDPskNENtRYFG~~tGG~~TPpv 221 (289)
T 1vps_A 191 YPVEIWHPDPAKNENTRYFGNYTGGTTTPPV 221 (289)
T ss_dssp SBTTTEEECTTSCTTEEEEEEEECCSSCCCE
T ss_pred cceEeEcCCCCcCcCceeeeeecCCCCCCCe
Confidence 677777763 45677 99999999994
No 24
>3nxg_A Major capsid protein VP1; beta-sandwich jelly roll, viral protein; 1.95A {Jc polyomavirus} PDB: 3nxd_C 3bwr_A* 3bwq_A*
Probab=35.99 E-value=17 Score=27.29 Aligned_cols=25 Identities=20% Similarity=0.563 Sum_probs=18.6
Q ss_pred CCCCccCCC-----CCCce-EEeeeccCCCC
Q psy3903 17 LSLRSFMPE-----TNSYM-TYEGSTTHPGC 41 (112)
Q Consensus 17 ~~l~~llp~-----~~~yy-~Y~GSLTtPpC 41 (112)
+.++.+-|| +..|| +|.|..+|||-
T Consensus 178 yPvE~W~pDPskNENtRYfG~~tGG~~TPPV 208 (272)
T 3nxg_A 178 YPVECWVPDPTRNENTRYFGTLTGGENVPPV 208 (272)
T ss_dssp SBGGGEEECTTSCTTEEEEEEEECSTTCCCE
T ss_pred cceEEECCCCCcCcCceeEEEecCCCCCCCe
Confidence 666777763 34566 99999999994
No 25
>1sid_A Polyomavirus coat protein VP1; icosahedral virus; HET: SIA GAL BGC; 3.65A {Mouse polyomavirus} SCOP: b.121.6.1 PDB: 1sie_A*
Probab=31.81 E-value=14 Score=29.02 Aligned_cols=25 Identities=28% Similarity=0.660 Sum_probs=19.1
Q ss_pred CCCCccCCC-----CCCce-EEeeeccCCCC
Q psy3903 17 LSLRSFMPE-----TNSYM-TYEGSTTHPGC 41 (112)
Q Consensus 17 ~~l~~llp~-----~~~yy-~Y~GSLTtPpC 41 (112)
+.++.+.|| +..|| +|.|.++|||-
T Consensus 222 yPVE~W~PDPskNENtRYFG~~tGG~~TPPV 252 (383)
T 1sid_A 222 YPVEIWHPDPAKNENTRYFGNYTGGTTTPPV 252 (383)
T ss_dssp SBTTTEEECCCSSCSEEEEEEEECCSSCCCE
T ss_pred cceEEECCCCCcCcCceeeEEecCCCCCCCe
Confidence 677777763 44576 99999999994
No 26
>1sva_1 Simian virus 40; virus coat protein, icosahedral virus; 3.10A {Simian virus 40} SCOP: b.121.6.1
Probab=31.80 E-value=17 Score=28.33 Aligned_cols=25 Identities=24% Similarity=0.667 Sum_probs=18.9
Q ss_pred CCCCccCCC-----CCCce-EEeeeccCCCC
Q psy3903 17 LSLRSFMPE-----TNSYM-TYEGSTTHPGC 41 (112)
Q Consensus 17 ~~l~~llp~-----~~~yy-~Y~GSLTtPpC 41 (112)
+.++.+.|| +..|| +|.|.++|||-
T Consensus 203 yPVE~W~pDPskNENtRYFG~~tGG~~TPPV 233 (361)
T 1sva_1 203 YPVECWVPDPSKNENTRYFGTYTGGENVPPV 233 (361)
T ss_dssp SBGGGEEECTTTCTTEEEEEEEECCSSCCCE
T ss_pred cceEEECCCCCcCcCceeeEEecCCCCCCCe
Confidence 667777763 44576 99999999994
No 27
>3iys_A Major capsid protein VP1; avian, polyomavirus, APV, icosahedral virus, virus; 11.30A {Budgerigar fledgling disease polyomavi}
Probab=31.72 E-value=18 Score=28.03 Aligned_cols=25 Identities=16% Similarity=0.510 Sum_probs=18.8
Q ss_pred CCCCccCCC-----CCCce-EEeeeccCCCC
Q psy3903 17 LSLRSFMPE-----TNSYM-TYEGSTTHPGC 41 (112)
Q Consensus 17 ~~l~~llp~-----~~~yy-~Y~GSLTtPpC 41 (112)
+.++.+-|| +..|| +|.|..+|||-
T Consensus 194 yPVE~W~PDPskNENtRYFG~~tGG~~TPPV 224 (343)
T 3iys_A 194 YPIECWCPDPAKNENTRYYGNLTGGPETPPV 224 (343)
T ss_pred cceEEECCCCCcCcCceeeEEecCCCCCCCe
Confidence 666667763 45666 99999999995
No 28
>1beb_A Beta-lactoglobulin; lipocalin, MILK WHEY protein, bovine, retinol-binding; 1.80A {Bos taurus} SCOP: b.60.1.1 PDB: 3nq3_A* 1b0o_A 1bsq_A 1gx8_A* 1gx9_A* 1gxa_A* 2gj5_A* 2r56_A* 3npo_A 1b8e_A* 3nq9_A* 3qzj_A* 3qzk_A* 3ueu_A* 3uev_A* 3uew_A* 3uex_A* 4dq3_A* 4dq4_A* 1qg5_A ...
Probab=25.73 E-value=80 Score=20.28 Aligned_cols=26 Identities=8% Similarity=0.119 Sum_probs=22.5
Q ss_pred cceEEEEecccccCCHHHHHHHHHhhc
Q psy3903 43 ETTVWIIYNRPIYMTKQELYALRRLKQ 69 (112)
Q Consensus 43 E~V~WiV~~~pi~iS~~Ql~~fr~l~~ 69 (112)
....|+..++| .++.+.+++|+++..
T Consensus 116 ~~~~~llsR~~-~~~~~~~~~f~~~~~ 141 (162)
T 1beb_A 116 SLVCQCLVRTP-EVDDEALEKFDKALK 141 (162)
T ss_dssp TCEEEEEESSS-SCCHHHHHHHHHHHT
T ss_pred EEEEEEEecCC-CCCHHHHHHHHHHHH
Confidence 46789999998 889999999998864
Done!