BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>psy3908
MATDGQILLATAKWSDEGQYLREFVSKNSLPTVVKIIKGQYGNLGVPTLPSPGLQSTVLL
VSAGKRQKIIAQAVKLKEGRRFVGVGSRIDIPENYPGYFELLSEEGKSMRCCETVLEISR
RKIEAGCLIREAIKGIVAKYDEEGNLQSDGARIVNIGEVLLPKSEVTLGE

High Scoring Gene Products

Symbol, full name Information P value
sano
serrano 		protein from Drosophila melanogaster 3.0e-33

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  psy3908
        (170 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

FB|FBgn0034408 - symbol:sano "serrano" species:7227 "Dros...   371  3.0e-33   1


>FB|FBgn0034408 [details] [associations]
            symbol:sano "serrano" species:7227 "Drosophila melanogaster"
            [GO:0003674 "molecular_function" evidence=ND] [GO:0042067
            "establishment of ommatidial planar polarity" evidence=IDA]
            [GO:0035159 "regulation of tube length, open tracheal system"
            evidence=IMP] [GO:0045179 "apical cortex" evidence=IDA]
            EMBL:AE013599 GO:GO:0042067 GO:GO:0045179 GO:GO:0035159
            InterPro:IPR025946 Pfam:PF12736 EMBL:BT012302 RefSeq:NP_001137706.1
            RefSeq:NP_523788.2 RefSeq:NP_725838.1 RefSeq:NP_725839.1
            RefSeq:NP_725840.1 UniGene:Dm.695 EnsemblMetazoa:FBtr0086566
            EnsemblMetazoa:FBtr0086567 EnsemblMetazoa:FBtr0086568
            EnsemblMetazoa:FBtr0086569 EnsemblMetazoa:FBtr0290300 GeneID:37185
            KEGG:dme:Dmel_CG12758 UCSC:CG12758-RA CTD:37185 FlyBase:FBgn0034408
            eggNOG:NOG82663 InParanoid:Q6NLM8 OMA:PLFHIRY OrthoDB:EOG451C5X
            GenomeRNAi:37185 NextBio:802369 Uniprot:Q6NLM8
        Length = 778

 Score = 371 (135.7 bits), Expect = 3.0e-33, P = 3.0e-33
 Identities = 76/134 (56%), Positives = 101/134 (75%)

Query:     2 ATDGQILLATAKWSDEGQ-YLREFVSKNSLPTVVKIIKGQYGNLGVPTLPSPGLQSTVLL 60
             ATDGQI+LA +++ D    YLR+F SK  LP V KIIKGQ+  LGVPTL +P LQST L 
Sbjct:     3 ATDGQIILAASRFGDATPVYLRDF-SKQPLPAVAKIIKGQHQALGVPTLSAPSLQSTALF 61

Query:    61 VSAGKRQKIIAQAVKLKEGRRFVGVGSRIDIPENYPGYFELLSEEGKSMRCCETVLEISR 120
             +SAGK+ +I+AQ +K+KEGR+   VG+++ IPE Y GYFELLSE+G+S RC ++VLE+SR
Sbjct:    62 LSAGKKYQILAQPIKIKEGRKPTNVGAKVLIPETYGGYFELLSEDGRSTRCIDSVLELSR 121

Query:   121 RKIEAGCLIREAIK 134
             R+  A  L+RE  +
Sbjct:   122 RR-NARVLVRETFR 134


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.316   0.136   0.383    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      170       170   0.00086  108 3  11 22  0.44    32
                                                     31  0.47    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  558 (59 KB)
  Total size of DFA:  129 KB (2082 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  16.57u 0.09s 16.66t   Elapsed:  00:00:04
  Total cpu time:  16.57u 0.09s 16.66t   Elapsed:  00:00:04
  Start:  Thu Aug 15 15:48:33 2013   End:  Thu Aug 15 15:48:37 2013

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