RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy3910
(348 letters)
>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human
(Homo sapiens) [TaxId: 9606]}
Length = 285
Score = 82.7 bits (203), Expect = 1e-18
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Query: 2 NPNVKDNAGWTPLHDAVSIGNESVVRLLLE-AGALVNVPGLDNDTPLHLAARDVRPALAK 60
+ NV+ G TPL AV + +V+ LLE +N D T L LA +A+
Sbjct: 211 DVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAE 270
Query: 61 LLIQYGADVDKRNI 74
LL + GA D ++
Sbjct: 271 LLCKRGASTDCGDL 284
Score = 58.1 bits (139), Expect = 3e-10
Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 5/86 (5%)
Query: 2 NPNVKDNAGWTPLHDAVSIGN----ESVVRLLLEAGALVNVPGLDNDTPLHLAARDVRPA 57
+ N DN G L A+ + E++ LLL+ GA VNV G TPL LA
Sbjct: 174 DVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLG 233
Query: 58 LAKLLI-QYGADVDKRNIQGHKPLEY 82
L + L+ Q +++ + G L
Sbjct: 234 LVQRLLEQEHIEINDTDSDGKTALLL 259
Score = 57.3 bits (137), Expect = 5e-10
Identities = 26/87 (29%), Positives = 37/87 (42%), Gaps = 5/87 (5%)
Query: 1 MNPNVKDNAGWTPLHDAVSIGNESVVRLLL-EAGALVNVPGLDNDTPLHL----AARDVR 55
+ G T L DA G+ V+++LL E GA VN L +
Sbjct: 139 EDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDV 198
Query: 56 PALAKLLIQYGADVDKRNIQGHKPLEY 82
A+ LL+ +GADV+ R +G PL
Sbjct: 199 EAITHLLLDHGADVNVRGERGKTPLIL 225
Score = 52.7 bits (125), Expect = 2e-08
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 5 VKDNAGWTPLHDAVSIGNESVVRLLLEAGALVNVPGLDN-DTPLHLAARDVRPALAKLLI 63
V+DN L AV + +V+ LLE GA VN + TPLH A + R + +LL+
Sbjct: 3 VEDN---HLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLL 59
Query: 64 QY 65
++
Sbjct: 60 RH 61
Score = 39.9 bits (92), Expect = 2e-04
Identities = 10/43 (23%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 41 LDNDTPLHLAARDVRPALAKLLIQYGADVD-KRNIQGHKPLEY 82
++++ L A ++ L + L++ GA+V+ + G PL
Sbjct: 3 VEDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHN 45
Score = 39.9 bits (92), Expect = 3e-04
Identities = 27/110 (24%), Positives = 41/110 (37%), Gaps = 11/110 (10%)
Query: 1 MNPNVKDNAGWTPLHDAVSIGNESVVRLLLEAGALVN----------VPGLDNDTPLHLA 50
+ N D G+T +A G ++ L + GA VN T L A
Sbjct: 96 ADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDA 155
Query: 51 ARDVRPALAKLLI-QYGADVDKRNIQGHKPLEYLDVISRDDIKTDILTAL 99
A + K+L+ + GADV+ + G L + + S D I L
Sbjct: 156 AEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLL 205
Score = 39.2 bits (90), Expect = 5e-04
Identities = 30/82 (36%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Query: 2 NPNVKDN-AGWTPLHDAVSIGNESVVRLLLEAGALVNVPGLDNDTPLHLAARDVRPALAK 60
N N ++ GWTPLH+AV + E +V LLL GA + + TP LAA L K
Sbjct: 30 NVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLK 89
Query: 61 LLIQYGADVDKRNIQGHKPLEY 82
L + GADV++ + G
Sbjct: 90 LFLSKGADVNECDFYGFTAFME 111
>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId:
9606]}
Length = 408
Score = 83.9 bits (206), Expect = 1e-18
Identities = 28/71 (39%), Positives = 40/71 (56%)
Query: 12 TPLHDAVSIGNESVVRLLLEAGALVNVPGLDNDTPLHLAARDVRPALAKLLIQYGADVDK 71
TPLH A +G+ +V+ LL+ GA NV + +TPLH+AAR +AK L+Q A V+
Sbjct: 2 TPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNA 61
Query: 72 RNIQGHKPLEY 82
+ PL
Sbjct: 62 KAKDDQTPLHC 72
Score = 78.9 bits (193), Expect = 6e-17
Identities = 30/78 (38%), Positives = 41/78 (52%)
Query: 2 NPNVKDNAGWTPLHDAVSIGNESVVRLLLEAGALVNVPGLDNDTPLHLAARDVRPALAKL 61
+PNV + TPLH A G+ V + LL+ A VN D+ TPLH AAR + KL
Sbjct: 25 SPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTNMVKL 84
Query: 62 LIQYGADVDKRNIQGHKP 79
L++ A+ + GH P
Sbjct: 85 LLENNANPNLATTAGHTP 102
Score = 72.7 bits (177), Expect = 9e-15
Identities = 22/86 (25%), Positives = 38/86 (44%)
Query: 1 MNPNVKDNAGWTPLHDAVSIGNESVVRLLLEAGALVNVPGLDNDTPLHLAARDVRPALAK 60
+ N K G++PLH A G+ +V LLL+ GA N D TPL +A R ++
Sbjct: 321 ADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYISVTD 380
Query: 61 LLIQYGADVDKRNIQGHKPLEYLDVI 86
+L + + + + + +
Sbjct: 381 VLKVVTDETSFVLVSDKHRMSFPETV 406
Score = 69.6 bits (169), Expect = 9e-14
Identities = 28/96 (29%), Positives = 40/96 (41%)
Query: 1 MNPNVKDNAGWTPLHDAVSIGNESVVRLLLEAGALVNVPGLDNDTPLHLAARDVRPALAK 60
+ G+TPLH A G V LLLE A N G + TPLH+A + K
Sbjct: 123 ASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVK 182
Query: 61 LLIQYGADVDKRNIQGHKPLEYLDVISRDDIKTDIL 96
LL+ G G+ PL ++ ++ +L
Sbjct: 183 LLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLL 218
Score = 64.2 bits (155), Expect = 4e-12
Identities = 25/115 (21%), Positives = 41/115 (35%), Gaps = 33/115 (28%)
Query: 1 MNPNVKDNAGWTPLHDAVSIGNESVVRLLLEAGALVNVPGLDNDTPLH------------ 48
N N+ + +G TPLH G+ V +L++ G +V+ TPLH
Sbjct: 255 ANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVK 314
Query: 49 ---------------------LAARDVRPALAKLLIQYGADVDKRNIQGHKPLEY 82
AA+ + LL++ GA ++ + G PL
Sbjct: 315 FLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAI 369
Score = 60.0 bits (144), Expect = 1e-10
Identities = 31/81 (38%), Positives = 45/81 (55%)
Query: 2 NPNVKDNAGWTPLHDAVSIGNESVVRLLLEAGALVNVPGLDNDTPLHLAARDVRPALAKL 61
+PN G TPLH AV N +V+LLL G + P + TPLH+AA+ + +A+
Sbjct: 157 HPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARS 216
Query: 62 LIQYGADVDKRNIQGHKPLEY 82
L+QYG + ++QG PL
Sbjct: 217 LLQYGGSANAESVQGVTPLHL 237
Score = 55.8 bits (133), Expect = 2e-09
Identities = 28/114 (24%), Positives = 40/114 (35%), Gaps = 33/114 (28%)
Query: 2 NPNVKDNAGWTPLHDAVSIGNESVVRLLLEA----------------------------- 32
N K TPLH A IG+ ++V+LLLE
Sbjct: 58 KVNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLA 117
Query: 33 ----GALVNVPGLDNDTPLHLAARDVRPALAKLLIQYGADVDKRNIQGHKPLEY 82
A TPLH+AA+ + +A+LL++ A + G PL
Sbjct: 118 LLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHV 171
Score = 55.4 bits (132), Expect = 4e-09
Identities = 29/82 (35%), Positives = 41/82 (50%)
Query: 1 MNPNVKDNAGWTPLHDAVSIGNESVVRLLLEAGALVNVPGLDNDTPLHLAARDVRPALAK 60
+ N + G TPLH A G+ +V LLL A N+ TPLHL A++ +A
Sbjct: 222 GSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVAD 281
Query: 61 LLIQYGADVDKRNIQGHKPLEY 82
+LI++G VD G+ PL
Sbjct: 282 VLIKHGVMVDATTRMGYTPLHV 303
Score = 49.6 bits (117), Expect = 3e-07
Identities = 27/90 (30%), Positives = 40/90 (44%)
Query: 2 NPNVKDNAGWTPLHDAVSIGNESVVRLLLEAGALVNVPGLDNDTPLHLAARDVRPALAKL 61
+P+ G+TPLH A V R LL+ G N + TPLHLAA++ + L
Sbjct: 190 SPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVAL 249
Query: 62 LIQYGADVDKRNIQGHKPLEYLDVISRDDI 91
L+ A+ + N G PL + +
Sbjct: 250 LLSKQANGNLGNKSGLTPLHLVAQEGHVPV 279
>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1,
MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]}
Length = 291
Score = 75.9 bits (185), Expect = 3e-16
Identities = 24/82 (29%), Positives = 40/82 (48%)
Query: 1 MNPNVKDNAGWTPLHDAVSIGNESVVRLLLEAGALVNVPGLDNDTPLHLAARDVRPALAK 60
+N +G T LH A + G V++LL++A VN+ D TPLH AA + +
Sbjct: 190 INDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACR 249
Query: 61 LLIQYGADVDKRNIQGHKPLEY 82
+L++ D++ N G +
Sbjct: 250 ILVENLCDMEAVNKVGQTAFDV 271
Score = 68.6 bits (166), Expect = 8e-14
Identities = 20/61 (32%), Positives = 28/61 (45%)
Query: 2 NPNVKDNAGWTPLHDAVSIGNESVVRLLLEAGALVNVPGLDNDTPLHLAARDVRPALAKL 61
+ N+KD GWTPLH A G E R+L+E + T +A D+ L +L
Sbjct: 224 DVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADEDILGYLEEL 283
Query: 62 L 62
Sbjct: 284 Q 284
Score = 48.6 bits (114), Expect = 4e-07
Identities = 22/70 (31%), Positives = 34/70 (48%)
Query: 10 GWTPLHDAVSIGNESVVRLLLEAGALVNVPGLDNDTPLHLAARDVRPALAKLLIQYGADV 69
A S G+ V LLE GA +N +D T LH A D + K L++ GA++
Sbjct: 40 DGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANI 99
Query: 70 DKRNIQGHKP 79
++ + +G P
Sbjct: 100 NQPDNEGWIP 109
Score = 42.0 bits (97), Expect = 5e-05
Identities = 9/41 (21%), Positives = 15/41 (36%)
Query: 42 DNDTPLHLAARDVRPALAKLLIQYGADVDKRNIQGHKPLEY 82
D+ A L++ GAD++ N+ G L
Sbjct: 39 DDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQ 79
Score = 32.8 bits (73), Expect = 0.044
Identities = 27/76 (35%), Positives = 37/76 (48%)
Query: 2 NPNVKDNAGWTPLHDAVSIGNESVVRLLLEAGALVNVPGLDNDTPLHLAARDVRPALAKL 61
+ N + G T LH A N +V+ L+E GA +N P + PLH AA +A+
Sbjct: 65 DINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEY 124
Query: 62 LIQYGADVDKRNIQGH 77
LI GA V N +G
Sbjct: 125 LISQGAHVGAVNSEGD 140
Score = 32.4 bits (72), Expect = 0.067
Identities = 18/82 (21%), Positives = 26/82 (31%)
Query: 1 MNPNVKDNAGWTPLHDAVSIGNESVVRLLLEAGALVNVPGLDNDTPLHLAARDVRPALAK 60
N + + I + L T LH+AA + K
Sbjct: 157 NEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLK 216
Query: 61 LLIQYGADVDKRNIQGHKPLEY 82
LLIQ DV+ ++ G PL
Sbjct: 217 LLIQARYDVNIKDYDGWTPLHA 238
>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans
[TaxId: 6239]}
Length = 277
Score = 69.8 bits (169), Expect = 3e-14
Identities = 16/65 (24%), Positives = 26/65 (40%)
Query: 1 MNPNVKDNAGWTPLHDAVSIGNESVVRLLLEAGALVNVPGLDNDTPLHLAARDVRPALAK 60
N + +D G TP+ A G VV L++ GA V + T LA + +
Sbjct: 212 SNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNIVD 271
Query: 61 LLIQY 65
+ +
Sbjct: 272 IFDRC 276
Score = 61.7 bits (148), Expect = 1e-11
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Query: 1 MNPNVKDNAGWTPLHDAVSIGNESVVRLL-LEAGALVNVPGLDNDTPLHLAARDVRPALA 59
+ + G T LH A + N +V+ L E G+ + D TP+ LAA++ R +
Sbjct: 178 ARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVV 237
Query: 60 KLLIQYGADVDKRNIQGHKPLEY 82
LIQ GA V+ + H +
Sbjct: 238 MYLIQQGASVEAVDATDHTARQL 260
Score = 51.3 bits (121), Expect = 6e-08
Identities = 16/80 (20%), Positives = 30/80 (37%), Gaps = 10/80 (12%)
Query: 12 TPLHDAV-SIGNESVVRLLLEAGALVNVPGLDNDTPLHLAARDVRPALAKLL-------- 62
+P+ + G+ ++ + + P N T LH A + ++ L
Sbjct: 2 SPIKLHTEAAGSYAITEPITRESVNIIDPR-HNRTVLHWIASNSSAEKSEDLIVHEAKEC 60
Query: 63 IQYGADVDKRNIQGHKPLEY 82
I GADV+ + + PL
Sbjct: 61 IAAGADVNAMDCDENTPLML 80
>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 301
Score = 68.9 bits (167), Expect = 8e-14
Identities = 19/84 (22%), Positives = 36/84 (42%), Gaps = 3/84 (3%)
Query: 2 NPNVKDNAGWTPLHDAVSIGNESVVRLLL---EAGALVNVPGLDNDTPLHLAARDVRPAL 58
N + +D +S++ L ++N + DT L++AAR ++
Sbjct: 215 PIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISI 274
Query: 59 AKLLIQYGADVDKRNIQGHKPLEY 82
L+ YGAD N G +P+++
Sbjct: 275 VDALLDYGADPFIANKSGLRPVDF 298
Score = 63.9 bits (154), Expect = 3e-12
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 2 NPNVKDNAGWTPLHDAVSIGNESVVRLLLEAGALVNVPGLDNDTPLHLAA 51
N +D+ G T L+ A +GN S+V LL+ GA + P+ A
Sbjct: 251 MLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGA 300
Score = 53.9 bits (128), Expect = 7e-09
Identities = 20/101 (19%), Positives = 36/101 (35%), Gaps = 5/101 (4%)
Query: 1 MNPNVK-DNAGWTPLHDAVSIGNESVVRLLLEAGALVNVPGLDNDTPLHLAAR----DVR 55
+N N+ D G TPLH SI N +V+ L++ G+ ++ L A +
Sbjct: 97 LNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDS 156
Query: 56 PALAKLLIQYGADVDKRNIQGHKPLEYLDVISRDDIKTDIL 96
LL + + L ++ + S +
Sbjct: 157 GTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAA 197
>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit
10, gankyrin {Human (Homo sapiens) [TaxId: 9606]}
Length = 223
Score = 64.6 bits (156), Expect = 9e-13
Identities = 26/114 (22%), Positives = 36/114 (31%), Gaps = 33/114 (28%)
Query: 2 NPNVKDNAGWTPLHDAVSIGNESVVRLLLEAGALVNVPGLDNDTPLH------------- 48
N + G TPLH A S + +LLE GA + T +H
Sbjct: 95 QVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMIHI 154
Query: 49 -------LAARDV-------------RPALAKLLIQYGADVDKRNIQGHKPLEY 82
+D R AKLL+ GA + N + PL+
Sbjct: 155 LLYYKASTNIQDTEGNTPLHLACDEERVEEAKLLVSQGASIYIENKEEKTPLQV 208
Score = 58.8 bits (141), Expect = 8e-11
Identities = 26/114 (22%), Positives = 38/114 (33%), Gaps = 33/114 (28%)
Query: 2 NPNVKDNAGWTPLHDAVSIGNES---------------------------------VVRL 28
D T LH A S G+ +V+
Sbjct: 29 LATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKA 88
Query: 29 LLEAGALVNVPGLDNDTPLHLAARDVRPALAKLLIQYGADVDKRNIQGHKPLEY 82
LL GA VN + TPLH AA R +A +L++ GA+ D ++ +
Sbjct: 89 LLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHR 142
Score = 55.4 bits (132), Expect = 1e-09
Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Query: 1 MNPNVKDNAGWTPLHDAVSIGNESVVRLLLEAGALVNVPGLDNDTPLHLAARDVRPALAK 60
+ N++D G TPLH A +LL+ GA + + + TPL +A + + K
Sbjct: 160 ASTNIQDTEGNTPLHLACDEERVEEAKLLVSQGASIYIENKEEKTPLQVAKGGLG-LILK 218
Query: 61 LLIQ 64
+++
Sbjct: 219 RMVE 222
Score = 43.0 bits (100), Expect = 2e-05
Identities = 23/117 (19%), Positives = 35/117 (29%), Gaps = 34/117 (29%)
Query: 14 LHDAVSIGN-ESVVRLLLEAGALVNVPGLDNDTPLHLAAR-------------------- 52
+ + G E + +L +L D+ T LH A
Sbjct: 7 VCNLAYSGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDK 66
Query: 53 -------------DVRPALAKLLIQYGADVDKRNIQGHKPLEYLDVISRDDIKTDIL 96
R + K L+ GA V+ N G PL Y +R +I +L
Sbjct: 67 DDAGWSPLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLL 123
>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor
I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId:
10090]}
Length = 255
Score = 63.2 bits (152), Expect = 4e-12
Identities = 25/61 (40%), Positives = 30/61 (49%)
Query: 11 WTPLHDAVSIGNESVVRLLLEAGALVNVPGLDNDTPLHLAARDVRPALAKLLIQYGADVD 70
TPLH AV SV+ LLL+AGA TPL A P LA+LL +GA
Sbjct: 193 RTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAHGAPEP 252
Query: 71 K 71
+
Sbjct: 253 E 253
Score = 58.2 bits (139), Expect = 2e-10
Identities = 16/52 (30%), Positives = 21/52 (40%), Gaps = 3/52 (5%)
Query: 4 NVKDNAGWTPLHDAVSIGNESVVRLLLEAGA---LVNVPGLDNDTPLHLAAR 52
G T LH AV +E + LL A +++ T LHLAA
Sbjct: 3 GYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAI 54
Score = 52.8 bits (125), Expect = 1e-08
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 2 NPNVKDNAGWTPLHDAVSIGNESVVRLLLEAGA 34
+P + G TPL A+ N + RLL GA
Sbjct: 217 DPTARMYGGRTPLGSALLRPNPILARLLRAHGA 249
Score = 44.7 bits (104), Expect = 7e-06
Identities = 13/44 (29%), Positives = 17/44 (38%), Gaps = 3/44 (6%)
Query: 42 DNDTPLHLAARDVRPALAKLLIQYGAD---VDKRNIQGHKPLEY 82
D DT LHLA L+ + A +D +N G L
Sbjct: 8 DGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHL 51
Score = 42.0 bits (97), Expect = 5e-05
Identities = 23/74 (31%), Positives = 33/74 (44%)
Query: 4 NVKDNAGWTPLHDAVSIGNESVVRLLLEAGALVNVPGLDNDTPLHLAARDVRPALAKLLI 63
+++++ G T LH A +G S V L AGA V V T LHLA R A +L+
Sbjct: 39 DLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLL 98
Query: 64 QYGADVDKRNIQGH 77
Q + +
Sbjct: 99 QPRPSHPRDASDTY 112
Score = 38.1 bits (87), Expect = 9e-04
Identities = 15/38 (39%), Positives = 20/38 (52%)
Query: 45 TPLHLAARDVRPALAKLLIQYGADVDKRNIQGHKPLEY 82
TPLHLA ++ +LL++ GAD R G PL
Sbjct: 194 TPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGS 231
>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416
{Legionella pneumophila [TaxId: 446]}
Length = 346
Score = 63.0 bits (152), Expect = 9e-12
Identities = 13/89 (14%), Positives = 22/89 (24%), Gaps = 2/89 (2%)
Query: 2 NPNVKDNAGWTPLHDAVSIGNESVVRLLLEAGALVNVPGLD--NDTPLHLAARDVRPALA 59
V + A G+ V+ L E + + N LAA + +
Sbjct: 118 IVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVL 177
Query: 60 KLLIQYGADVDKRNIQGHKPLEYLDVISR 88
L + IQ +
Sbjct: 178 NRLCELAPTEATAMIQAENYYAFRWAAVG 206
Score = 60.7 bits (146), Expect = 6e-11
Identities = 16/77 (20%), Positives = 24/77 (31%), Gaps = 3/77 (3%)
Query: 4 NVKDNAGWTPLHDAVSIGNESV---VRLLLEAGALVNVPGLDNDTPLHLAARDVRPALAK 60
+ K A G S + LLL + +V V +N LAA + +
Sbjct: 84 HKKGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLN 143
Query: 61 LLIQYGADVDKRNIQGH 77
L + IQ
Sbjct: 144 RLCELAPTEIMAMIQAE 160
Score = 51.0 bits (121), Expect = 7e-08
Identities = 11/70 (15%), Positives = 18/70 (25%), Gaps = 5/70 (7%)
Query: 2 NPNVKDNAGWTPLHDAVSIGNESVVRLLLEAGAL-----VNVPGLDNDTPLHLAARDVRP 56
+ ++ L +R LL + D + L LA R
Sbjct: 271 SECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQ 330
Query: 57 ALAKLLIQYG 66
LL+
Sbjct: 331 GACALLLSIP 340
Score = 43.3 bits (101), Expect = 2e-05
Identities = 11/111 (9%), Positives = 24/111 (21%), Gaps = 4/111 (3%)
Query: 1 MNPNVKDNAGWTPLHDAVSIGNESVVRLLLEAGALVN---VPGLDNDTPLHLAARDVRPA 57
+ + A G+ V+ L E + + A
Sbjct: 152 EIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHN 211
Query: 58 LAKLLIQYGADVDKRNIQGHKPLEYLDVISRDDIKTDILTALSLPRLSAAP 108
+ L+ + I + V + L + + P
Sbjct: 212 VINFLLDCPVMLAYAEIHEFEYG-EKYVNPFIARHVNRLKEMHDAFKLSNP 261
Score = 41.8 bits (97), Expect = 7e-05
Identities = 12/94 (12%), Positives = 26/94 (27%), Gaps = 14/94 (14%)
Query: 1 MNPNVKDNAGWTPLHDAVSIGNESVVRLLLEAGALVNV-----------PGLDNDTPLHL 49
++ + + E V +LL A N G+ ++ +
Sbjct: 37 LSLMTLSYKEAIHIFLPGTKNMEQVRQLLCLYYAHYNRNAKQLWSDAHKKGIKSEVICFV 96
Query: 50 AARDVRPA---LAKLLIQYGADVDKRNIQGHKPL 80
AA + LL+ V + ++
Sbjct: 97 AAITGCSSALDTLCLLLTSDEIVKVIQAENYQAF 130
Score = 37.2 bits (85), Expect = 0.002
Identities = 9/44 (20%), Positives = 15/44 (34%), Gaps = 6/44 (13%)
Query: 2 NPNVKDNAGWTPLHDAVSIGNESVVRLLLEAGALVNVPGLDNDT 45
L A+ +GN+ LLL ++P + T
Sbjct: 309 PTATIPGDANELLRLALRLGNQGACALLL------SIPSVLALT 346
Score = 34.1 bits (77), Expect = 0.020
Identities = 6/69 (8%), Positives = 13/69 (18%), Gaps = 6/69 (8%)
Query: 6 KDNAGWTPLHDAVSIGNESVVRLLLEAGALVNVPGLDNDTPLHLAARDVRPALAKLLIQY 65
+ + G +V + G L +V + L+
Sbjct: 248 RLKEMHDAFKLSNPDGVFDLV------TKSECLQGFYMLRNLIRRNDEVLLDDIRFLLSI 301
Query: 66 GADVDKRNI 74
Sbjct: 302 PGIKALAPT 310
Score = 33.7 bits (76), Expect = 0.025
Identities = 12/120 (10%), Positives = 31/120 (25%), Gaps = 11/120 (9%)
Query: 2 NPNVKDNAGWTPLHDAVSIGNESVVRLLLEAGALVNVPGLDNDTPLHLAARDVRPALAKL 61
++ + AV G+ +V+ LL+ +
Sbjct: 189 TAMIQAENYYAFRWAAVGRGHHNVINFLLDCPV-------MLAYAEIHEFEYGEKYVNPF 241
Query: 62 LIQYGADVDKRNIQGHKPLEYLDVISRDDIKTDILTALSLPRLSAAPPPSLPNCIDIVIY 121
+ ++ R + H + + D+ T L + +D + +
Sbjct: 242 IARHVN----RLKEMHDAFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRNDEVLLDDIRF 297
Score = 29.1 bits (64), Expect = 0.85
Identities = 12/82 (14%), Positives = 25/82 (30%), Gaps = 1/82 (1%)
Query: 4 NVKDNAGWTPLHDAVSIGNESVVRLLLEAGAL-VNVPGLDNDTPLHLAARDVRPALAKLL 62
N+++ L I E++ + + A L + + L + +LL
Sbjct: 6 NIENYENDPQLRLIPWILWENLFQHFISANELSLMTLSYKEAIHIFLPGTKNMEQVRQLL 65
Query: 63 IQYGADVDKRNIQGHKPLEYLD 84
Y A ++ Q
Sbjct: 66 CLYYAHYNRNAKQLWSDAHKKG 87
>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit
10, gankyrin {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 229
Score = 57.9 bits (138), Expect = 2e-10
Identities = 17/69 (24%), Positives = 28/69 (40%), Gaps = 4/69 (5%)
Query: 1 MNPNVKDNAGWTPLHDAVSIGNESVVRLLLEA-GALVNVPGLDNDTPLHLAARDVRPALA 59
N +D GWTPL A++ G+ LL+E GA ++ +A + +
Sbjct: 163 SAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALNE---QVK 219
Query: 60 KLLIQYGAD 68
K + D
Sbjct: 220 KFFLNNVVD 228
Score = 52.1 bits (123), Expect = 2e-08
Identities = 12/42 (28%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Query: 12 TPLHDAVSIGNESVVRLLLEA-GALVNVPGLDNDTPLHLAAR 52
PLH A V+ LL + +L+ D PLH +
Sbjct: 2 YPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVS 43
Score = 47.1 bits (110), Expect = 8e-07
Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
Query: 1 MNPNVKDNAGWTPLHDAVSIGNESVVRLLLEAGAL-VNVPGLDNDTPLHLAARDVRPALA 59
+ +KD PLH A S+G+ ++ LL G VN TPL A + A
Sbjct: 129 ASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAA 188
Query: 60 KLLI-QYGADVDKRNIQGHKPLEY 82
LL+ +YGA+ D + +G K +
Sbjct: 189 VLLVEKYGAEYDLVDNKGAKAEDV 212
Score = 41.7 bits (96), Expect = 5e-05
Identities = 9/40 (22%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Query: 44 DTPLHLAARDVRPALAK-LLIQYGADVDKRNIQGHKPLEY 82
+ PLH A + + LL + + +++ G PL +
Sbjct: 1 NYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHW 40
Score = 34.8 bits (78), Expect = 0.010
Identities = 10/32 (31%), Positives = 12/32 (37%)
Query: 2 NPNVKDNAGWTPLHDAVSIGNESVVRLLLEAG 33
KD G PLH +VS + LL
Sbjct: 26 LLLQKDQDGRIPLHWSVSFQAHEITSFLLSKM 57
>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain
{Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Length = 209
Score = 54.4 bits (129), Expect = 2e-09
Identities = 24/82 (29%), Positives = 39/82 (47%)
Query: 1 MNPNVKDNAGWTPLHDAVSIGNESVVRLLLEAGALVNVPGLDNDTPLHLAARDVRPALAK 60
+ N DN+G T LH A ++ N V +LL A + ++TPL LAAR+ +K
Sbjct: 114 ADINAADNSGKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEASK 173
Query: 61 LLIQYGADVDKRNIQGHKPLEY 82
L+ A+ + + P +
Sbjct: 174 ALLDNFANREITDHMDRLPRDV 195
Score = 54.4 bits (129), Expect = 2e-09
Identities = 14/62 (22%), Positives = 27/62 (43%)
Query: 1 MNPNVKDNAGWTPLHDAVSIGNESVVRLLLEAGALVNVPGLDNDTPLHLAARDVRPALAK 60
N + +D+ TPL A G+ + LL+ A + + P +A+ + + +
Sbjct: 147 ANRDAQDDKDETPLFLAAREGSYEASKALLDNFANREITDHMDRLPRDVASERLHHDIVR 206
Query: 61 LL 62
LL
Sbjct: 207 LL 208
Score = 40.5 bits (93), Expect = 1e-04
Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Query: 25 VVRLLLEAGALVNVPGLDND--TPLHLAARDVRPALAKLLIQY 65
V+ LL GA +N +D T LHLAAR R AK L+
Sbjct: 4 VISDLLAQGAELNAT-MDKTGETSLHLAARFARADAAKRLLDA 45
Score = 36.7 bits (83), Expect = 0.002
Identities = 8/29 (27%), Positives = 9/29 (31%), Gaps = 1/29 (3%)
Query: 2 NPNVK-DNAGWTPLHDAVSIGNESVVRLL 29
N D G T LH A + L
Sbjct: 14 ELNATMDKTGETSLHLAARFARADAAKRL 42
Score = 28.2 bits (61), Expect = 1.3
Identities = 5/26 (19%), Positives = 11/26 (42%), Gaps = 1/26 (3%)
Query: 58 LAKLLIQYGADVD-KRNIQGHKPLEY 82
+ L+ GA+++ + G L
Sbjct: 4 VISDLLAQGAELNATMDKTGETSLHL 29
>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]}
Length = 228
Score = 53.3 bits (126), Expect = 7e-09
Identities = 18/52 (34%), Positives = 27/52 (51%)
Query: 1 MNPNVKDNAGWTPLHDAVSIGNESVVRLLLEAGALVNVPGLDNDTPLHLAAR 52
N N + +G + LH A G +VR L+ +GA ++ NDTPL +A
Sbjct: 168 ANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARS 219
Score = 52.2 bits (123), Expect = 2e-08
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 4/47 (8%)
Query: 10 GWTPLHDAVSIGNESVVRLLL----EAGALVNVPGLDNDTPLHLAAR 52
G TPLH AV GN V L+ + G +++ TPLHLA
Sbjct: 3 GDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVI 49
Score = 49.8 bits (117), Expect = 1e-07
Identities = 24/72 (33%), Positives = 35/72 (48%)
Query: 11 WTPLHDAVSIGNESVVRLLLEAGALVNVPGLDNDTPLHLAARDVRPALAKLLIQYGADVD 70
+PL AV + S+V+LLL+ GA VN + LH A+ L + L++ GAD
Sbjct: 145 RSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSS 204
Query: 71 KRNIQGHKPLEY 82
+N PL
Sbjct: 205 LKNCHNDTPLMV 216
Score = 44.5 bits (103), Expect = 7e-06
Identities = 15/45 (33%), Positives = 18/45 (40%), Gaps = 4/45 (8%)
Query: 42 DNDTPLHLAAR----DVRPALAKLLIQYGADVDKRNIQGHKPLEY 82
D DTPLH+A L L Q G ++D N PL
Sbjct: 2 DGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHL 46
Score = 41.0 bits (94), Expect = 9e-05
Identities = 7/26 (26%), Positives = 13/26 (50%)
Query: 2 NPNVKDNAGWTPLHDAVSIGNESVVR 27
+ ++K+ TPL A S ++R
Sbjct: 202 DSSLKNCHNDTPLMVARSRRVIDILR 227
Score = 30.6 bits (67), Expect = 0.20
Identities = 6/16 (37%), Positives = 9/16 (56%)
Query: 2 NPNVKDNAGWTPLHDA 17
++ +N TPLH A
Sbjct: 32 ELDIYNNLRQTPLHLA 47
>d1t15a1 c.15.1.3 (A:1649-1757) Breast cancer associated protein,
BRCA1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 109
Score = 50.5 bits (120), Expect = 1e-08
Identities = 21/114 (18%), Positives = 47/114 (41%), Gaps = 7/114 (6%)
Query: 118 IVIYADQLDKTQTSGLAQFVKTLSSGADVPIIVSTLLQSNVNILLVNGTPERTCIATCNV 177
+ + L + + +F + ++ L+ +++ E C T
Sbjct: 2 MSMVVSGLTPEEFMLVYKFARKH--HI----TLTNLITEETTHVVMKTDAEFVCERTLKY 55
Query: 178 LRAILSGIKAVDYTWISRSLEIGKVLPVEEFEILG-TVDYPLAKPFHRSRENKE 230
I G V Y W+++S++ K+L +FE+ G V+ + R+RE+++
Sbjct: 56 FLGIAGGKWVVSYFWVTQSIKERKMLNEHDFEVRGDVVNGRNHQGPKRARESQD 109
>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens)
[TaxId: 9606]}
Length = 221
Score = 52.2 bits (123), Expect = 2e-08
Identities = 19/62 (30%), Positives = 27/62 (43%)
Query: 10 GWTPLHDAVSIGNESVVRLLLEAGALVNVPGLDNDTPLHLAARDVRPALAKLLIQYGADV 69
G T LH AV + N +V LLL+ GA VN +P L + + L Q +
Sbjct: 145 GRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLEN 204
Query: 70 DK 71
+
Sbjct: 205 LQ 206
Score = 48.4 bits (113), Expect = 4e-07
Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 4/47 (8%)
Query: 10 GWTPLHDAVSIGNES----VVRLLLEAGALVNVPGLDNDTPLHLAAR 52
G + LH A+ ++ V+R + A +N TPLHLA
Sbjct: 2 GDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVI 48
Score = 46.4 bits (108), Expect = 2e-06
Identities = 4/33 (12%), Positives = 11/33 (33%)
Query: 2 NPNVKDNAGWTPLHDAVSIGNESVVRLLLEAGA 34
+ N G++P + + + L +
Sbjct: 170 DVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTL 202
Score = 45.3 bits (105), Expect = 4e-06
Identities = 10/43 (23%), Positives = 18/43 (41%), Gaps = 4/43 (9%)
Query: 42 DNDTPLHLAAR----DVRPALAKLLIQYGADVDKRNIQGHKPL 80
D D+ LHLA + + + + A ++ +N PL
Sbjct: 1 DGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPL 43
Score = 38.7 bits (88), Expect = 5e-04
Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 11 WTPLHDAVSIGNESVVRLLLEAGALVNVPGLDN-DTPLHLAARDVRPALAKLLIQYGADV 69
T LH A G +V LL+ GA VN N T LHLA P L LL++ GADV
Sbjct: 112 HTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADV 171
Query: 70 DKRNIQGHKPLEY 82
++ QG+ P +
Sbjct: 172 NRVTYQGYSPYQL 184
Score = 30.6 bits (67), Expect = 0.24
Identities = 7/16 (43%), Positives = 9/16 (56%)
Query: 2 NPNVKDNAGWTPLHDA 17
N ++N TPLH A
Sbjct: 31 FLNFQNNLQQTPLHLA 46
>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId:
9606]}
Length = 156
Score = 46.8 bits (109), Expect = 4e-07
Identities = 9/33 (27%), Positives = 13/33 (39%)
Query: 1 MNPNVKDNAGWTPLHDAVSIGNESVVRLLLEAG 33
N +++ G T A G VV L+ G
Sbjct: 124 SNVGHRNHKGDTACDLARLYGRNEVVSLMQANG 156
Score = 39.1 bits (89), Expect = 2e-04
Identities = 8/33 (24%), Positives = 12/33 (36%)
Query: 45 TPLHLAARDVRPALAKLLIQYGADVDKRNIQGH 77
L AA L+Q +V+ +N G
Sbjct: 3 NELASAAARGDLEQLTSLLQNNVNVNAQNGFGR 35
Score = 37.6 bits (85), Expect = 6e-04
Identities = 7/27 (25%), Positives = 11/27 (40%)
Query: 12 TPLHDAVSIGNESVVRLLLEAGALVNV 38
L A + G+ + LL+ VN
Sbjct: 3 NELASAAARGDLEQLTSLLQNNVNVNA 29
Score = 34.5 bits (77), Expect = 0.007
Identities = 8/31 (25%), Positives = 10/31 (32%)
Query: 36 VNVPGLDNDTPLHLAARDVRPALAKLLIQYG 66
V DT LA R + L+ G
Sbjct: 126 VGHRNHKGDTACDLARLYGRNEVVSLMQANG 156
>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo
sapiens) [TaxId: 9606]}
Length = 156
Score = 45.2 bits (105), Expect = 2e-06
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 2 NPNVKDNAGWTPLHDAVSIGNESVVRLLLE 31
+ + +D G TPL A+ G + +V +L
Sbjct: 125 DLHRRDARGLTPLELALQRGAQDLVDILQG 154
Score = 37.9 bits (86), Expect = 5e-04
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Query: 1 MNPNVKDNAGWTPLHDAVSIGNESVVRLLLEAGALVNVPGLDNDTPLHLAARDVRPALAK 60
+ NV D G P+H AV G+ +VV L A + ++ TPL LA + L
Sbjct: 92 ADVNVPDGTGALPIHLAVQEGHTAVVSFL-AAESDLHRRDARGLTPLELALQRGAQDLVD 150
Query: 61 LLIQ 64
+L
Sbjct: 151 ILQG 154
Score = 32.1 bits (71), Expect = 0.051
Identities = 9/40 (22%), Positives = 12/40 (30%), Gaps = 1/40 (2%)
Query: 10 GWTPLHDAVSIGNESVVRLLLEA-GALVNVPGLDNDTPLH 48
L A + G+ VR LL + T L
Sbjct: 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQ 41
Score = 30.2 bits (66), Expect = 0.21
Identities = 10/35 (28%), Positives = 14/35 (40%), Gaps = 3/35 (8%)
Query: 45 TPLHLAAR--DVRPALAKLLIQYGADVDKRNIQGH 77
L AA DV+ + +LL + D N G
Sbjct: 4 DRLSGAAARGDVQ-EVRRLLHRELVHPDALNRFGK 37
>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 154
Score = 44.6 bits (104), Expect = 3e-06
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 2 NPNVKDNAGWTPLHDAVSIGNESVVRLLLEAGA 34
+ + + +G TPL A + +E LL +A +
Sbjct: 106 SIEIANESGETPLDIAKRLKHEHCEELLTQALS 138
Score = 39.2 bits (90), Expect = 2e-04
Identities = 17/113 (15%), Positives = 29/113 (25%), Gaps = 38/113 (33%)
Query: 1 MNPNVKDNAGWTPLHDAV---SIGNESVVRLLLEAGALV--------------------- 36
+ T LH AV + +V L++ +
Sbjct: 36 IPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAE 95
Query: 37 ------------NVPGLDNDTPLHLAARDVRPALAKLLIQYGADVDKRNIQGH 77
+ +TPL +A R +LL Q + + N H
Sbjct: 96 CLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALS--GRFNSHVH 146
>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 153
Score = 42.9 bits (99), Expect = 9e-06
Identities = 5/29 (17%), Positives = 12/29 (41%)
Query: 1 MNPNVKDNAGWTPLHDAVSIGNESVVRLL 29
+ + + T ++ GNE + +L
Sbjct: 124 ADVHTQSKFCKTAFDISIDNGNEDLAEIL 152
Score = 40.2 bits (92), Expect = 9e-05
Identities = 8/26 (30%), Positives = 12/26 (46%)
Query: 12 TPLHDAVSIGNESVVRLLLEAGALVN 37
L +A G + VR+L+ GA
Sbjct: 4 KKLLEAARAGQDDEVRILMANGAPFT 29
Score = 39.5 bits (90), Expect = 1e-04
Identities = 18/61 (29%), Positives = 29/61 (47%)
Query: 2 NPNVKDNAGWTPLHDAVSIGNESVVRLLLEAGALVNVPGLDNDTPLHLAARDVRPALAKL 61
+ N KD T LH A ++ VV LL++ GA V+ T ++ + LA++
Sbjct: 92 DVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEI 151
Query: 62 L 62
L
Sbjct: 152 L 152
Score = 37.1 bits (84), Expect = 9e-04
Identities = 8/32 (25%), Positives = 12/32 (37%)
Query: 42 DNDTPLHLAARDVRPALAKLLIQYGADVDKRN 73
D L AAR + ++L+ GA
Sbjct: 1 DLGKKLLEAARAGQDDEVRILMANGAPFTTDW 32
Score = 27.9 bits (60), Expect = 1.4
Identities = 16/50 (32%), Positives = 23/50 (46%)
Query: 33 GALVNVPGLDNDTPLHLAARDVRPALAKLLIQYGADVDKRNIQGHKPLEY 82
GA VN + T LH A + +LLI+YGADV ++ +
Sbjct: 90 GADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDI 139
>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo
sapiens) [TaxId: 9606]}
Length = 125
Score = 40.7 bits (93), Expect = 4e-05
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 1 MNPNVKDNAGWTPLHDAVSIGNESVVRLLLEA 32
+V+D G P+ A +G+ V R L A
Sbjct: 93 ARLDVRDAWGRLPVDLAEELGHRDVARYLRAA 124
Score = 33.8 bits (75), Expect = 0.011
Identities = 12/28 (42%), Positives = 13/28 (46%)
Query: 10 GWTPLHDAVSIGNESVVRLLLEAGALVN 37
L A + G VR LLEAGA N
Sbjct: 3 SADWLATAAARGRVEEVRALLEAGANPN 30
Score = 29.2 bits (63), Expect = 0.32
Identities = 9/35 (25%), Positives = 15/35 (42%)
Query: 43 NDTPLHLAARDVRPALAKLLIQYGADVDKRNIQGH 77
+ L AA R + L++ GA+ + N G
Sbjct: 3 SADWLATAAARGRVEEVRALLEAGANPNAPNSYGR 37
Score = 26.5 bits (56), Expect = 2.7
Identities = 5/20 (25%), Positives = 8/20 (40%)
Query: 45 TPLHLAARDVRPALAKLLIQ 64
P+ LA +A+ L
Sbjct: 104 LPVDLAEELGHRDVARYLRA 123
>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 130
Score = 33.9 bits (76), Expect = 0.008
Identities = 5/28 (17%), Positives = 12/28 (42%)
Query: 12 TPLHDAVSIGNESVVRLLLEAGALVNVP 39
L D+ G +V+ ++ ++P
Sbjct: 3 ALLLDSSLEGEFDLVQRIIYEVDDPSLP 30
Score = 33.1 bits (74), Expect = 0.017
Identities = 2/36 (5%), Positives = 6/36 (16%), Gaps = 3/36 (8%)
Query: 2 NPNVKDNAG---WTPLHDAVSIGNESVVRLLLEAGA 34
+ + + G + L
Sbjct: 92 AVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQE 127
Score = 31.6 bits (70), Expect = 0.062
Identities = 19/72 (26%), Positives = 29/72 (40%), Gaps = 3/72 (4%)
Query: 1 MNPNVKDNAGWTPLHDAVSIGNESVVRLLLEAGALVNVP---GLDNDTPLHLAARDVRPA 57
+N N D+ GWTPLH A S N V + L+E+GA V + +
Sbjct: 58 VNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQ 117
Query: 58 LAKLLIQYGADV 69
++ L +
Sbjct: 118 CSQFLYGVQEKM 129
Score = 26.6 bits (57), Expect = 2.6
Identities = 6/33 (18%), Positives = 12/33 (36%)
Query: 45 TPLHLAARDVRPALAKLLIQYGADVDKRNIQGH 77
L ++ + L + +I D N +G
Sbjct: 3 ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGI 35
>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 118
Score = 31.8 bits (70), Expect = 0.039
Identities = 7/31 (22%), Positives = 12/31 (38%), Gaps = 4/31 (12%)
Query: 1 MNPNVKDNAGWTPLHDAVSIGNESVVRLLLE 31
+ VK G T L + ++ LL+
Sbjct: 92 ADKTVKGPDGLTALEAT----DNQAIKALLQ 118
Score = 29.1 bits (63), Expect = 0.30
Identities = 3/21 (14%), Positives = 7/21 (33%)
Query: 12 TPLHDAVSIGNESVVRLLLEA 32
A+ G+ V+ +
Sbjct: 4 KEFMWALKNGDLDEVKDYVAK 24
>d1cdza_ c.15.1.1 (A:) DNA-repair protein XRCC1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 96
Score = 27.4 bits (60), Expect = 1.0
Identities = 13/114 (11%), Positives = 29/114 (25%), Gaps = 25/114 (21%)
Query: 233 LPGLFNGLQVYLTKPWPTSSPLSSEDMRDIFKRGGATLLNREPDPESMNLSESSVMYHVN 292
LP F G +L +P + +S+
Sbjct: 2 LPDFFQGKHFFLYGEFPGD---ERRKLIRYVTAFNGE--------LEDYMSDRVQFVITA 50
Query: 293 RPQHRLYNLSQAIVYSEEALPRRLYNMEHVKALGLSWVRACVEQFEIVQPKSPY 346
+ + L + + + W+ +C E+ +++ P Y
Sbjct: 51 QEWDPSFE-------------EALMDNPSLAFVRPRWIYSCNEKQKLL-PHQLY 90
>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional
dehydrogenase/ferrochelatase Met8p, N-terminal domain
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 150
Score = 26.7 bits (58), Expect = 2.6
Identities = 7/73 (9%), Positives = 16/73 (21%)
Query: 26 VRLLLEAGALVNVPGLDNDTPLHLAARDVRPALAKLLIQYGADVDKRNIQGHKPLEYLDV 85
+ L+ G + + D + + + A E +
Sbjct: 29 LYKLMPTGCKLTLVSPDLHKSIIPKFGKFIQNKDQPDYREDAKRFINPNWDPTKNEIYEY 88
Query: 86 ISRDDIKTDILTA 98
I D +
Sbjct: 89 IRSDFKDEYLDLE 101
>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase
{Pseudomonas fragi [TaxId: 296]}
Length = 260
Score = 26.3 bits (57), Expect = 4.9
Identities = 10/54 (18%), Positives = 19/54 (35%), Gaps = 1/54 (1%)
Query: 20 IGNESVVRLLLEAGALVNVPGLDNDTPLHLAARDVRPALAKLLIQYGADVDKRN 73
IG + L GA + + G + + + ++ GAD+ K
Sbjct: 16 IG-LGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGE 68
>d2v3ga1 c.1.8.3 (A:8-280) Endoglucanase H N-terminal domain
{Clostridium thermocellum [TaxId: 1515]}
Length = 273
Score = 25.7 bits (56), Expect = 8.9
Identities = 6/38 (15%), Positives = 12/38 (31%)
Query: 242 VYLTKPWPTSSPLSSEDMRDIFKRGGATLLNREPDPES 279
V+ W T ++ G ++ EP +
Sbjct: 31 VHQFINWSTDFSWVRPYADAVYNNGSILMITWEPWEYN 68
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.317 0.135 0.396
Gapped
Lambda K H
0.267 0.0562 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,253,704
Number of extensions: 56856
Number of successful extensions: 285
Number of sequences better than 10.0: 1
Number of HSP's gapped: 254
Number of HSP's successfully gapped: 107
Length of query: 348
Length of database: 2,407,596
Length adjustment: 86
Effective length of query: 262
Effective length of database: 1,226,816
Effective search space: 321425792
Effective search space used: 321425792
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 53 (24.6 bits)