Query psy3913
Match_columns 423
No_of_seqs 217 out of 989
Neff 9.3
Searched_HMMs 29240
Date Fri Aug 16 20:36:23 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3913.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/3913hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3e6u_A LANC-like protein 1; al 100.0 2.4E-65 8.2E-70 503.3 35.7 386 4-422 13-411 (411)
2 2g0d_A Nisin biosynthesis prot 100.0 8.8E-43 3E-47 344.6 25.3 342 53-414 28-391 (409)
3 3e6u_A LANC-like protein 1; al 99.9 5.1E-26 1.8E-30 223.4 24.0 288 23-360 91-401 (411)
4 2g0d_A Nisin biosynthesis prot 99.9 4.6E-24 1.6E-28 210.5 18.4 296 23-361 51-390 (409)
5 3pmm_A Putative cytoplasmic pr 98.4 0.00028 9.6E-09 67.9 27.7 282 20-333 19-331 (382)
6 2ahf_A Unsaturated glucuronyl 98.3 5.7E-05 2E-09 72.4 18.6 166 234-411 89-294 (377)
7 3pmm_A Putative cytoplasmic pr 98.1 0.00047 1.6E-08 66.4 21.6 236 120-379 71-331 (382)
8 2zzr_A Unsaturated glucuronyl 98.1 0.00015 5.3E-09 69.7 18.0 158 240-411 123-319 (397)
9 2gz6_A N-acetyl-D-glucosamine 98.0 0.0004 1.4E-08 67.1 20.2 239 122-378 59-337 (388)
10 2ahf_A Unsaturated glucuronyl 98.0 0.00086 2.9E-08 64.2 20.5 260 68-350 50-340 (377)
11 2zzr_A Unsaturated glucuronyl 98.0 0.00051 1.8E-08 66.1 18.7 258 68-348 76-363 (397)
12 3k7x_A LIN0763 protein; Q92DQ0 97.9 0.00012 4.1E-09 69.6 13.4 211 169-413 48-284 (349)
13 3k11_A Putative glycosyl hydro 97.7 0.0072 2.5E-07 58.9 22.9 297 14-333 18-363 (445)
14 3k7x_A LIN0763 protein; Q92DQ0 97.5 0.011 3.8E-07 56.0 20.4 240 119-377 49-298 (349)
15 1nc5_A Hypothetical protein YT 97.5 0.0033 1.1E-07 60.4 16.1 246 119-380 43-314 (373)
16 3gt5_A N-acetylglucosamine 2-e 97.4 0.013 4.5E-07 56.7 19.3 247 122-378 58-343 (402)
17 2zbl_A Putative isomerase; N-a 97.1 0.028 9.6E-07 54.7 18.3 237 122-378 57-349 (421)
18 1nc5_A Hypothetical protein YT 97.0 0.0035 1.2E-07 60.2 10.6 205 173-410 47-291 (373)
19 2gz6_A N-acetyl-D-glucosamine 96.9 0.0028 9.5E-08 61.1 9.3 139 234-380 56-207 (388)
20 1fp3_A N-acyl-D-glucosamine 2- 96.7 0.068 2.3E-06 51.5 17.2 233 124-379 64-348 (402)
21 3k11_A Putative glycosyl hydro 96.7 0.18 6E-06 49.1 19.6 245 120-379 85-363 (445)
22 3gt5_A N-acetylglucosamine 2-e 96.5 0.011 3.7E-07 57.3 10.1 134 236-379 57-207 (402)
23 3h7l_A Endoglucanase; dehydrog 95.5 0.063 2.1E-06 54.0 10.3 142 234-380 164-338 (586)
24 1fp3_A N-acyl-D-glucosamine 2- 95.2 1.4 4.9E-05 42.1 18.7 248 66-333 62-348 (402)
25 2zbl_A Putative isomerase; N-a 94.4 0.17 5.7E-06 49.2 9.8 132 237-379 57-206 (421)
26 1gxm_A Pectate lyase; mechanis 90.4 1.7 5.9E-05 40.1 10.2 135 233-378 76-247 (332)
27 1r76_A Pectate lyase; A-helica 90.1 2.2 7.7E-05 40.5 10.9 93 233-333 151-256 (408)
28 1dl2_A Class I alpha-1,2-manno 86.0 5.3 0.00018 39.4 11.1 121 250-377 123-271 (511)
29 3e7j_A Heparinase II protein; 85.6 5.8 0.0002 41.2 11.7 213 123-367 86-312 (749)
30 1r76_A Pectate lyase; A-helica 84.8 18 0.00062 34.3 13.7 124 256-379 82-256 (408)
31 1nxc_A Mannosyl-oligosaccharid 81.1 17 0.00058 35.5 12.4 131 239-377 113-269 (478)
32 1ks8_A Endo-B-1,4-glucanase; c 80.6 16 0.00055 35.2 12.0 115 251-376 90-241 (433)
33 3h7l_A Endoglucanase; dehydrog 79.6 8.8 0.0003 38.5 9.9 130 237-380 309-484 (586)
34 1nxc_A Mannosyl-oligosaccharid 79.1 5.4 0.00018 39.0 8.0 74 305-378 111-206 (478)
35 2v8i_A Pectate lyase; periplas 77.6 6.6 0.00023 37.7 7.8 81 304-385 378-466 (543)
36 1clc_A Endoglucanase CELD; EC: 76.6 19 0.00066 36.6 11.7 119 251-375 232-378 (639)
37 1x9d_A Endoplasmic reticulum m 75.5 20 0.00067 35.6 10.9 131 239-377 177-333 (538)
38 1ut9_A Cellulose 1,4-beta-cell 74.7 21 0.00072 36.1 11.3 114 251-373 227-380 (609)
39 1x9d_A Endoplasmic reticulum m 74.4 6.7 0.00023 38.9 7.3 74 305-378 175-268 (538)
40 3gzk_A Cellulase; fold from GH 74.0 36 0.0012 33.7 12.7 117 251-374 188-333 (537)
41 1tf4_A T. fusca endo/EXO-cellu 73.1 8.2 0.00028 39.0 7.8 118 251-374 91-240 (605)
42 3a0o_A Oligo alginate lyase; a 72.9 27 0.00093 36.4 12.1 56 122-185 212-272 (776)
43 1hcu_A Alpha-1,2-mannosidase; 71.5 25 0.00086 34.5 10.6 116 252-377 132-276 (503)
44 1ia6_A Cellulase CEL9M; cellul 70.4 14 0.00048 35.7 8.5 72 303-374 157-237 (441)
45 1dl2_A Class I alpha-1,2-manno 65.9 14 0.00048 36.4 7.5 132 184-333 122-273 (511)
46 1gxm_A Pectate lyase; mechanis 64.1 89 0.003 28.7 12.9 118 260-379 36-180 (332)
47 2xfg_A Endoglucanase 1; hydrol 62.9 16 0.00056 35.5 7.3 72 303-374 176-260 (466)
48 2sqc_A Squalene-hopene cyclase 59.3 41 0.0014 34.1 9.9 105 250-375 8-118 (631)
49 1v5d_A Chitosanase; chitosan d 59.0 91 0.0031 29.3 11.6 77 300-376 136-227 (386)
50 2ri9_A Mannosyl-oligosaccharid 58.8 1.2E+02 0.0041 29.5 12.6 119 251-377 118-263 (475)
51 1g87_A Endocellulase 9G; endog 58.7 26 0.00089 35.4 8.2 71 304-374 156-238 (614)
52 1hcu_A Alpha-1,2-mannosidase; 57.5 54 0.0019 32.1 10.0 83 238-333 183-278 (503)
53 2yik_A Endoglucanase; hydrolas 57.1 63 0.0022 32.6 10.7 72 302-373 220-305 (611)
54 2ri9_A Mannosyl-oligosaccharid 51.9 35 0.0012 33.3 7.5 73 307-379 95-196 (475)
55 1wzz_A Probable endoglucanase; 47.4 42 0.0014 31.0 7.0 78 300-377 107-200 (334)
56 1ks8_A Endo-B-1,4-glucanase; c 34.6 3.1E+02 0.011 26.1 12.2 118 236-380 215-341 (433)
57 1ia6_A Cellulase CEL9M; cellul 34.0 3.2E+02 0.011 26.1 17.8 184 122-347 159-354 (441)
58 1w6k_A Lanosterol synthase; cy 31.8 1E+02 0.0035 31.8 7.7 47 229-276 585-631 (732)
59 1w6k_A Lanosterol synthase; cy 28.4 87 0.003 32.3 6.5 106 250-375 70-181 (732)
60 2pqr_C WD repeat protein YKR03 28.0 3.8 0.00013 27.3 -2.4 42 8-62 13-54 (64)
61 1wu4_A Xylanase Y; (alpla/alph 27.2 2.3E+02 0.0077 26.7 8.6 37 300-336 129-170 (396)
62 1kwf_A Endoglucanase A; hydrol 23.0 3E+02 0.01 25.5 8.5 78 300-377 121-212 (363)
No 1
>3e6u_A LANC-like protein 1; alpha barrel, cytoplasm, signaling protein; 2.60A {Homo sapiens} PDB: 3e73_A*
Probab=100.00 E-value=2.4e-65 Score=503.30 Aligned_cols=386 Identities=35% Similarity=0.656 Sum_probs=321.8
Q ss_pred CCCCCCCCCCCCCCCCC----ccc---c-hh---HHHHHHHHHHHHHHHhCCCCcccccCCCCCCcccchHHHHHHHHHH
Q psy3913 4 ANTRHFINRLDLNKGGS----LVE---N-FT---VWKEEADKIIQSVLINVDANADITKHKIDHTMYTGNLGVGYMLWYV 72 (423)
Q Consensus 4 ~~~~~~~n~~~~~~~~~----~~~---~-~~---~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ly~G~~Gi~~~l~~l 72 (423)
.++|||+|||+||+++. ... . ++ .++++++++++.+.+.++.. .+.+.++|+|.+||+|++.++
T Consensus 13 ~~~r~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~-----~~~~~~lY~G~~Gia~~l~~l 87 (411)
T 3e6u_A 13 MAQRAFPNPYADYNKSLAEGYFDAAGRLTPEFSQRLTNKIRELLQQMERGLKSA-----DPRDGTGYTGWAGIAVLYLHL 87 (411)
T ss_dssp GGGGBCCCCSCCCCHHHHHTTBCTTCCBCHHHHHHHHHHHHHHHHHHHHHTTTS-----CTTCCCSSSSHHHHHHHHHHH
T ss_pred ccCccCCCCCCccccccccccccccccccHHHHHHHHHHHHHHHHHHHhhcccC-----CCCCCCeeeChHHHHHHHHHH
Confidence 45799999999998531 111 1 22 57777777777777766543 578999999999999999999
Q ss_pred hhCCCCCCCcHHHHHHHHHHHHHHHHHhhhhccCCCCCCcccccCchHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHH
Q psy3913 73 AQSPIYASEAPTYYLKARRYLDNLKNVLATKKHRCITDYSAFLCGDAGIHAVLGVFYNAVGDKERSQCHFDMYTKLATHI 152 (423)
Q Consensus 73 ~~~~~~~d~~~~~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~G~aGi~~l~~~l~~~~~~~~~l~~~l~~~~~~~~~~ 152 (423)
++. ++++ +|++.+.++++.+.+.+. + ..+++++|.+|++++++.+++.+++++..++.++.+.+..
T Consensus 88 ~~~--t~d~--~yl~~a~~~l~~~~~~l~-----~--~~~~~~~G~aG~l~~l~~ly~~~g~~~~a~~~~~~l~~~~--- 153 (411)
T 3e6u_A 88 YDV--FGDP--AYLQLAHGYVKQSLNCLT-----K--RSITFLCGDAGPLAVAAVLYHKMNNEKQAEDCITRLIHLN--- 153 (411)
T ss_dssp HHH--HCCH--HHHHHHHHHHHHHHTTCC-----S--CCCCTTTSTHHHHHHHHHHHHHTTCHHHHHHHHHHHHGGG---
T ss_pred HHh--cCCH--HHHHHHHHHHHHHHHHhc-----c--cCCccccCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh---
Confidence 999 9886 899999999988877542 3 5789999999999888899999998764444444333222
Q ss_pred hhccccCCCCccccccchhHHHHHHHHHHHhCcccCcHHHHHHHHHHHHHcCcccccccc--CCCCcceeecCCcccccc
Q psy3913 153 KAIDYVKFGGDEFLVGRAGYLAGIIWAERQLGRQIMSLEDRTAICNALILSGRSYSQANN--LRCPLMYHYYGTEYLGAC 230 (423)
Q Consensus 153 ~~~~~~~~~~~d~l~G~aG~l~~ll~l~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~G~a 230 (423)
.. ....+.|+++|.||++++++.+++.++++.+.+..+.++++.++++++.+..... ...|+||.|+++.++|||
T Consensus 154 ~~---~~~~~~dll~G~AG~l~aLl~L~~~~~~~~~~~~~i~~i~~~ii~~g~~~~~~~~~~~~~pl~~~w~~~~~~G~a 230 (411)
T 3e6u_A 154 KI---DPHAPNEMLYGRIGYIYALLFVNKNFGVEKIPQSHIQQICETILTSGENLARKRNFTAKSPLMYEWYQEYYVGAA 230 (411)
T ss_dssp GG---CTTCCSSTTTSHHHHHHHHHHHHHHHSSCCSCHHHHHHHHHHHHHHHHHHHHHTTTTTTCSCCCCBTTBCBCSTT
T ss_pred cc---cccCChhhhcCcHHHHHHHHHHHHHcCCccchHHHHHHHHHHHHHHHHHHHHhccccCCCCcceeecCccCCccc
Confidence 11 1234689999999999999999999999888877889999999987765432221 357899999999999999
Q ss_pred cchHHHHHHHhccccccCCCcchHHHHHHHHHHHHHccCCCCCCCCCCccCCCCCccccccccccccccCchHHHHHHHH
Q psy3913 231 HGLSGILQVLLCEKNYVKSNPDIEKDIKETVDFLLKLQMPNGNFPADLKELYSPTDAKSAANELVHWCHGAPGVIYLMAK 310 (423)
Q Consensus 231 HG~~GI~~~Ll~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~g~wp~~~~~~~~~~~~~~~~~~~~~WChG~~Gi~~~l~~ 310 (423)
||++||+++|+++++.++ ++.+.+.++++++++++.+.++|+||+++.+ ..+.+++||||++||+.++.+
T Consensus 231 HG~aGI~~~Ll~~~~~~~-~~~~~~~i~~~l~~l~~~~~~~g~wp~~~~~---------~~~~~~~wChG~~Gi~~~l~~ 300 (411)
T 3e6u_A 231 HGLAGIYYYLMQPSLQVS-QGKLHSLVKPSVDYVCQLKFPSGNYPPCIGD---------NRDLLVHWCHGAPGVIYMLIQ 300 (411)
T ss_dssp TSHHHHHHHHTCGGGCCC-HHHHHHTHHHHHHHHHHTCCTTSCCCSBTTC---------CCCCCCSSSSSHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHhhcC-hHHHHHHHHHHHHHHHHhhccCCCCCCCCCc---------ccCccccccCCcHHHHHHHHH
Confidence 999999999999998887 6788899999999999987778999987653 345689999999999999999
Q ss_pred HHHHhCcHhHHHHHHHHHHHHHHhCCCCCCCcccCchhhHHHHHHHHHHHcCChHHHHHHHHHHHHhhchhhhhcCCCCC
Q psy3913 311 AYLFWGEEKYLNSCIKCGEVIWEKGLLKKGPGICHGVSGNGYAFLLLYRLTKDEQYLHKAYLFANFMLSDDFKRNARMPD 390 (423)
Q Consensus 311 ~~~~~~~~~~~~~a~~~~~~~~~~g~~~~~~~LChG~aG~~~~ll~l~~~t~~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 390 (423)
++++++++++.+.|+++.+.+|++|++++++|||||.+|++++|+++++.|++++|+++|.++++++.+.. ....+.++
T Consensus 301 ~~~~~~~~~~~~~a~~~~~~~~~~g~~~~~~~lChG~aG~~~~ll~~~~~t~~~~~~~~A~~~~~~~~~~~-~~~~~~~~ 379 (411)
T 3e6u_A 301 AYKVFREEKYLCDAYQCADVIWQYGLLKKGYGLCHGSAGNAYAFLTLYNLTQDMKYLYRACKFAEWCLEYG-EHGCRTPD 379 (411)
T ss_dssp HHHHHCCHHHHHHHHHHHHHHHHHCSBTTCSCSTTSHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHTTTT-SSCCCCCS
T ss_pred HHHHcCCHHHHHHHHHHHHHHHhcCccCCCCceecChHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhc-cccCCCCC
Confidence 99999999999999999999999998778999999999999999999999999999999999999987542 11334567
Q ss_pred CCCccccchHHHHHHHHHccCccCCCCCCCCC
Q psy3913 391 APFSLYEGLAGTACFFIDLMQPEKAAFPFMDV 422 (423)
Q Consensus 391 ~~~gl~~G~aGi~~~Ll~~~~p~~~~fp~~~~ 422 (423)
.++|||+|.|||+++|++++.|++++||+||+
T Consensus 380 ~~~sL~~G~aGi~~~Ll~l~~p~~~~fp~~~~ 411 (411)
T 3e6u_A 380 TPFSLFEGMAGTIYFLADLLVPTKARFPAFEL 411 (411)
T ss_dssp STTSTTTSHHHHHHHHHHHTSGGGCCCTTTCC
T ss_pred CCChhhccHHHHHHHHHHHcCCCcccCCCCCC
Confidence 78999999999999999999999999999986
No 2
>2g0d_A Nisin biosynthesis protein NISC; alpha toroid, alpha barrel, biosynthetic protein; 2.21A {Lactococcus lactis subsp} SCOP: a.102.6.1 PDB: 2g02_A
Probab=100.00 E-value=8.8e-43 Score=344.58 Aligned_cols=342 Identities=18% Similarity=0.171 Sum_probs=242.9
Q ss_pred CCCCCcccchHHHHHHHHHHhhCCCCCCCcHHHHHHHHHHHHHHHHHhhhhccCCCCCCcccccCchHHHHHHHHHHHHh
Q psy3913 53 KIDHTMYTGNLGVGYMLWYVAQSPIYASEAPTYYLKARRYLDNLKNVLATKKHRCITDYSAFLCGDAGIHAVLGVFYNAV 132 (423)
Q Consensus 53 ~~~~~ly~G~~Gi~~~l~~l~~~~~~~d~~~~~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~G~aGi~~l~~~l~~~~ 132 (423)
..+.++|+|.+||++++.++++. ++++ +|.+.+.++++.+.+.+... .. ..+++++|.+|+++++..+++..
T Consensus 28 ~~~~sLy~G~aGial~l~~l~~~--~~~~--~~~~~a~~~l~~~~~~~~~~--~~--~~~gl~~G~aGi~~~l~~l~~~~ 99 (409)
T 2g0d_A 28 FGELTLSTGLPGIILMLAELKNK--DNSK--IYQKKIDNYIEYIVSKLSTY--GL--LTGSLYSGAAGIALSILHLREDD 99 (409)
T ss_dssp GGGGSTTTSHHHHHHHHHTTTTS--TTHH--HHHHHHHHHHHHHHHHHHHH--CC--SCCCTTTSHHHHHHHHGGGTTTC
T ss_pred CCCCchhccHHHHHHHHHHHHHh--CCcc--hHHHHHHHHHHHHHHHHHhC--CC--CCCcccccHHHHHHHHHHHHhcc
Confidence 45789999999999999999999 8775 79998999998888766431 23 57899999999977664444322
Q ss_pred CChhHHHHHHHHHHHHHHH----Hhh-c--cccCCCCccccccchhHHHHHHHHHHHhCcccCcHHHHHHHHHHHHHcCc
Q psy3913 133 GDKERSQCHFDMYTKLATH----IKA-I--DYVKFGGDEFLVGRAGYLAGIIWAERQLGRQIMSLEDRTAICNALILSGR 205 (423)
Q Consensus 133 ~~~~~l~~~l~~~~~~~~~----~~~-~--~~~~~~~~d~l~G~aG~l~~ll~l~~~~~~~~~~~~~i~~i~~~~~~~~~ 205 (423)
...+..++.+.+.+.. ..+ . .+.....+|+++|.||++++++.++ ++ ...+.++++++.+++..+
T Consensus 100 ---~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~dl~~G~aGi~~~Ll~l~----~~-~~~~~~~~~~~~l~~~~~ 171 (409)
T 2g0d_A 100 ---EKYKNLLDSLNRYIEYFVREKIEGFNLENITPPDYDVIEGLSGILSYLLLIN----DE-QYDDLKILIINFLSNLTK 171 (409)
T ss_dssp ---HHHHHHHHHHHHHHHHHHHHHHHTCCGGGCCHHHHSSSSSHHHHHHHHTTCC----CG-GGHHHHHHHHHHHHHTTS
T ss_pred ---chHHHHHHHHHHHHHHHHHHHHHHhhhccCCcccccHhcCHHHHHHHHHHcc----Cc-hhHHHHHHHHHHHHHHHh
Confidence 2123333333333321 111 0 0012346899999999999998774 22 234577888888887521
Q ss_pred ------ccccccc----CCCCcceeecCCcccccccchHHHHHHHhccccccCCCcchHHHHHHHHHHHHHccC--CCCC
Q psy3913 206 ------SYSQANN----LRCPLMYHYYGTEYLGACHGLSGILQVLLCEKNYVKSNPDIEKDIKETVDFLLKLQM--PNGN 273 (423)
Q Consensus 206 ------~~~~~~~----~~~~~~~~~~~~~~~G~aHG~~GI~~~Ll~~~~~~~~~~~~~~~i~~~~~~l~~~~~--~~g~ 273 (423)
.|..... ...|.+|+ ++..++|||||++||+++|+.++.....++.+.+.++++++++++.+. ++|+
T Consensus 172 ~~~~~~~w~~~~~~~~~~~~~~~~~-~~~~~~G~aHG~aGi~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~ 250 (409)
T 2g0d_A 172 ENNGLISLYIKSENQMSQSESEMYP-LGCLNMGLAHGLAGVGCILAYAHIKGYSNEASLSALQKIIFIYEKFELERKKQF 250 (409)
T ss_dssp CCSSSCTTCBCGGGSSSHHHHHHCT-TCBEECCTTTSHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHCCCGGGTT
T ss_pred cCCCCCceeecCCccccchhhhcCC-CCCccCCchhhHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHHhcCCCCC
Confidence 1211100 01123444 456789999999999988888876543357889999999999987543 5788
Q ss_pred -CCC-CCccCCC-CCccccccccccccccCchHHHHHHHHHHHHhCcHhHHHHHHHHHHHHHHhCCCCCCCcccCchhhH
Q psy3913 274 -FPA-DLKELYS-PTDAKSAANELVHWCHGAPGVIYLMAKAYLFWGEEKYLNSCIKCGEVIWEKGLLKKGPGICHGVSGN 350 (423)
Q Consensus 274 -wp~-~~~~~~~-~~~~~~~~~~~~~WChG~~Gi~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~g~~~~~~~LChG~aG~ 350 (423)
||+ ....... ........+.+++||||++||+.+++++++.++|+++++.++++.+.+|+++...++++||||.+|+
T Consensus 251 ~wp~g~~~~~~~~~~~~~~~~~~~~~WChG~~Gi~~~l~~~~~~~~d~~~~~~a~~~~~~~~~~~~~~~~~~LCHG~aG~ 330 (409)
T 2g0d_A 251 LWKDGLVADELKKEKVIREASFIRDAWCYGGPGISLLYLYGGLALDNDYFVDKAEKILESAMQRKLGIDSYMICHGYSGL 330 (409)
T ss_dssp CCCSEECHHHHHHTSCCSCCSCCCCCSSSSHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCTTCCSCCTTTSHHHH
T ss_pred cCCCccccHhhhcccccccCCCCCCcCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhccCCCCCCCCChHHHH
Confidence 997 3221000 0000012446799999999999999999999999999999999999999874446799999999999
Q ss_pred HHHHHHHHHHcCChHHHHHHHHHHHHhhchhhhhcCCCCCCCCccccchHHHHHHHHHccCccC
Q psy3913 351 GYAFLLLYRLTKDEQYLHKAYLFANFMLSDDFKRNARMPDAPFSLYEGLAGTACFFIDLMQPEK 414 (423)
Q Consensus 351 ~~~ll~l~~~t~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~gl~~G~aGi~~~Ll~~~~p~~ 414 (423)
+++|+++++.|++++|+++|.++. +...+. .+......++|||+|.|||+++|+++.+|++
T Consensus 331 ~~~l~~l~~~~~~~~~~~~a~~~~-~~~~~~--~g~~~~~~~~gL~~G~AGi~~~Ll~l~~p~~ 391 (409)
T 2g0d_A 331 IEICSLFKRLLNTKKFDSYMEEFN-VNSEQI--LEEYGDESGTGFLEGISGCILVLSKFEYSIN 391 (409)
T ss_dssp HHHHHHHHHHHCCCTTHHHHHHHH-HTHHHH--HHSCCSTTCSSTTTSHHHHHHHHHHHHSCCC
T ss_pred HHHHHHHHHHhCCHHHHHHHHHcC-Ccchhh--ccccCCCCCCceeCCHHHHHHHHHHhcCCCC
Confidence 999999999999999999998742 221111 1222223445999999999999999999976
No 3
>3e6u_A LANC-like protein 1; alpha barrel, cytoplasm, signaling protein; 2.60A {Homo sapiens} PDB: 3e73_A*
Probab=99.95 E-value=5.1e-26 Score=223.42 Aligned_cols=288 Identities=16% Similarity=0.148 Sum_probs=202.0
Q ss_pred cchhHHHHHHHHHHHHHHHhCCCCcccccCCCCCCcccchHHHHHHHHHHhhCCCCCCCcHHHHHHHHHHHHHHHHHhhh
Q psy3913 23 ENFTVWKEEADKIIQSVLINVDANADITKHKIDHTMYTGNLGVGYMLWYVAQSPIYASEAPTYYLKARRYLDNLKNVLAT 102 (423)
Q Consensus 23 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ly~G~~Gi~~~l~~l~~~~~~~d~~~~~~~~a~~~i~~~~~~~~~ 102 (423)
.++++|.+.+.++++.+.+.++. ...+++.|.+|+++++..+++. +++. + .+.+.++.+.+...
T Consensus 91 t~d~~yl~~a~~~l~~~~~~l~~--------~~~~~~~G~aG~l~~l~~ly~~--~g~~--~---~a~~~~~~l~~~~~- 154 (411)
T 3e6u_A 91 FGDPAYLQLAHGYVKQSLNCLTK--------RSITFLCGDAGPLAVAAVLYHK--MNNE--K---QAEDCITRLIHLNK- 154 (411)
T ss_dssp HCCHHHHHHHHHHHHHHHTTCCS--------CCCCTTTSTHHHHHHHHHHHHH--TTCH--H---HHHHHHHHHHGGGG-
T ss_pred cCCHHHHHHHHHHHHHHHHHhcc--------cCCccccCcHHHHHHHHHHHHH--hCCH--H---HHHHHHHHHHHHhc-
Confidence 46688999999999999887641 3579999999999999999988 7764 3 34445555444332
Q ss_pred hccCCCCCCcccccCchHHHHHHHHHHHHhCChhHHHHHHHHHH-HHHHHHh------h--------ccccCCCCccccc
Q psy3913 103 KKHRCITDYSAFLCGDAGIHAVLGVFYNAVGDKERSQCHFDMYT-KLATHIK------A--------IDYVKFGGDEFLV 167 (423)
Q Consensus 103 ~~~~~~~~~~~~~~G~aGi~~l~~~l~~~~~~~~~l~~~l~~~~-~~~~~~~------~--------~~~~~~~~~d~l~ 167 (423)
.+.+ ...+++.|.+|+++.+..+++.++++..++.++..+. .+++... . ..|.......+.|
T Consensus 155 -~~~~--~~~dll~G~AG~l~aLl~L~~~~~~~~~~~~~i~~i~~~ii~~g~~~~~~~~~~~~~pl~~~w~~~~~~G~aH 231 (411)
T 3e6u_A 155 -IDPH--APNEMLYGRIGYIYALLFVNKNFGVEKIPQSHIQQICETILTSGENLARKRNFTAKSPLMYEWYQEYYVGAAH 231 (411)
T ss_dssp -GCTT--CCSSTTTSHHHHHHHHHHHHHHHSSCCSCHHHHHHHHHHHHHHHHHHHHHTTTTTTCSCCCCBTTBCBCSTTT
T ss_pred -cccc--CChhhhcCcHHHHHHHHHHHHHcCCccchHHHHHHHHHHHHHHHHHHHHhccccCCCCcceeecCccCCcccc
Confidence 1233 4688999999998777889999988765554433322 2222211 0 0233233466789
Q ss_pred cchhHHHHHHHHHHHhCcccCcHHHHHHHHHHHHHcCc---cccccccCCCCcceeecCCcccccccchHHHHHHHhccc
Q psy3913 168 GRAGYLAGIIWAERQLGRQIMSLEDRTAICNALILSGR---SYSQANNLRCPLMYHYYGTEYLGACHGLSGILQVLLCEK 244 (423)
Q Consensus 168 G~aG~l~~ll~l~~~~~~~~~~~~~i~~i~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~G~aHG~~GI~~~Ll~~~ 244 (423)
|.||++++++.++..++++.+ .+.+++.++.+++... +|..... -.....++||||.+||+++|+.++
T Consensus 232 G~aGI~~~Ll~~~~~~~~~~~-~~~i~~~l~~l~~~~~~~g~wp~~~~--------~~~~~~~~wChG~~Gi~~~l~~~~ 302 (411)
T 3e6u_A 232 GLAGIYYYLMQPSLQVSQGKL-HSLVKPSVDYVCQLKFPSGNYPPCIG--------DNRDLLVHWCHGAPGVIYMLIQAY 302 (411)
T ss_dssp SHHHHHHHHTCGGGCCCHHHH-HHTHHHHHHHHHHTCCTTSCCCSBTT--------CCCCCCCSSSSSHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhhcChHHH-HHHHHHHHHHHHHhhccCCCCCCCCC--------cccCccccccCCcHHHHHHHHHHH
Confidence 999999988887766655432 3456666666665321 1211000 012346899999999999999999
Q ss_pred cccCCCcchHHHHHHHHHHHHHccCCCCCCCCCCccCCCCCccccccccccccccCchHHHHHHHHHHHHhCcHhHHHHH
Q psy3913 245 NYVKSNPDIEKDIKETVDFLLKLQMPNGNFPADLKELYSPTDAKSAANELVHWCHGAPGVIYLMAKAYLFWGEEKYLNSC 324 (423)
Q Consensus 245 ~~~~~~~~~~~~i~~~~~~l~~~~~~~g~wp~~~~~~~~~~~~~~~~~~~~~WChG~~Gi~~~l~~~~~~~~~~~~~~~a 324 (423)
+.++ ++.+.+.+.++++.+.+ .|.. ..+ .++|||.+|++++|+++++.++++++++.|
T Consensus 303 ~~~~-~~~~~~~a~~~~~~~~~----~g~~--------------~~~---~~lChG~aG~~~~ll~~~~~t~~~~~~~~A 360 (411)
T 3e6u_A 303 KVFR-EEKYLCDAYQCADVIWQ----YGLL--------------KKG---YGLCHGSAGNAYAFLTLYNLTQDMKYLYRA 360 (411)
T ss_dssp HHHC-CHHHHHHHHHHHHHHHH----HCSB--------------TTC---SCSTTSHHHHHHHHHHHHHHHCCHHHHHHH
T ss_pred HHcC-CHHHHHHHHHHHHHHHh----cCcc--------------CCC---CceecChHHHHHHHHHHHHHhCCHHHHHHH
Confidence 9988 67888888887776654 2210 012 356999999999999999999999999999
Q ss_pred HHHHHHHHHhC-----CCCCCCcccCchhhHHHHHHHHHHH
Q psy3913 325 IKCGEVIWEKG-----LLKKGPGICHGVSGNGYAFLLLYRL 360 (423)
Q Consensus 325 ~~~~~~~~~~g-----~~~~~~~LChG~aG~~~~ll~l~~~ 360 (423)
.+.++.+.+.+ +....++|+.|.||++++|+++.+.
T Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~sL~~G~aGi~~~Ll~l~~p 401 (411)
T 3e6u_A 361 CKFAEWCLEYGEHGCRTPDTPFSLFEGMAGTIYFLADLLVP 401 (411)
T ss_dssp HHHHHHHTTTTSSCCCCCSSTTSTTTSHHHHHHHHHHHTSG
T ss_pred HHHHHHHHHhccccCCCCCCCChhhccHHHHHHHHHHHcCC
Confidence 99988875432 2234569999999999999998653
No 4
>2g0d_A Nisin biosynthesis protein NISC; alpha toroid, alpha barrel, biosynthetic protein; 2.21A {Lactococcus lactis subsp} SCOP: a.102.6.1 PDB: 2g02_A
Probab=99.92 E-value=4.6e-24 Score=210.51 Aligned_cols=296 Identities=14% Similarity=0.107 Sum_probs=187.1
Q ss_pred cchhHHHHHHHHHHHHHHHhCCCCcccccCCCCCCcccchHHHHHHHHHHhhCCCCCCCcHHHHHHHHHHHHHHHHH-hh
Q psy3913 23 ENFTVWKEEADKIIQSVLINVDANADITKHKIDHTMYTGNLGVGYMLWYVAQSPIYASEAPTYYLKARRYLDNLKNV-LA 101 (423)
Q Consensus 23 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ly~G~~Gi~~~l~~l~~~~~~~d~~~~~~~~a~~~i~~~~~~-~~ 101 (423)
..+++|.+.++++++.+.+.+... ...+.|+|+|.+|+++++.++++. .++. +++++.+.+++...... +.
T Consensus 51 ~~~~~~~~~a~~~l~~~~~~~~~~-----~~~~~gl~~G~aGi~~~l~~l~~~--~~~~-~~~l~~~~~~~~~~~~~~l~ 122 (409)
T 2g0d_A 51 DNSKIYQKKIDNYIEYIVSKLSTY-----GLLTGSLYSGAAGIALSILHLRED--DEKY-KNLLDSLNRYIEYFVREKIE 122 (409)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHH-----CCSCCCTTTSHHHHHHHHGGGTTT--CHHH-HHHHHHHHHHHHHHHHHHHH
T ss_pred CCcchHHHHHHHHHHHHHHHHHhC-----CCCCCcccccHHHHHHHHHHHHhc--cchH-HHHHHHHHHHHHHHHHHHHH
Confidence 355678888898999888765321 235689999999999999888765 4311 24555555555433221 21
Q ss_pred hhcc---CCCCCCcccccCchHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHh---h-ccccCC--------------
Q psy3913 102 TKKH---RCITDYSAFLCGDAGIHAVLGVFYNAVGDKERSQCHFDMYTKLATHIK---A-IDYVKF-------------- 160 (423)
Q Consensus 102 ~~~~---~~~~~~~~~~~G~aGi~~l~~~l~~~~~~~~~l~~~l~~~~~~~~~~~---~-~~~~~~-------------- 160 (423)
.... .. ...|+++|.+|++.++..++ ++...+.+.+.++.+++... . ..|...
T Consensus 123 ~~~~~~~~~--~~~dl~~G~aGi~~~Ll~l~----~~~~~~~~~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~ 196 (409)
T 2g0d_A 123 GFNLENITP--PDYDVIEGLSGILSYLLLIN----DEQYDDLKILIINFLSNLTKENNGLISLYIKSENQMSQSESEMYP 196 (409)
T ss_dssp TCCGGGCCH--HHHSSSSSHHHHHHHHTTCC----CGGGHHHHHHHHHHHHHTTSCCSSSCTTCBCGGGSSSHHHHHHCT
T ss_pred HhhhccCCc--ccccHhcCHHHHHHHHHHcc----CchhHHHHHHHHHHHHHHHhcCCCCCceeecCCccccchhhhcCC
Confidence 1000 12 35899999999976654443 33433333333444443211 0 123211
Q ss_pred ---CCccccccchhHHHHHHHHHHHhC-cccCcHHHHHHHHHHHHHcCccccccccCCCCcceee---------------
Q psy3913 161 ---GGDEFLVGRAGYLAGIIWAERQLG-RQIMSLEDRTAICNALILSGRSYSQANNLRCPLMYHY--------------- 221 (423)
Q Consensus 161 ---~~~d~l~G~aG~l~~ll~l~~~~~-~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~--------------- 221 (423)
....+.||.||+++.+...+.... ++. ..+.++++++.+++.... . ....+|+-
T Consensus 197 ~~~~~~G~aHG~aGi~~~L~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~--~----~~g~~wp~g~~~~~~~~~~~~~~ 269 (409)
T 2g0d_A 197 LGCLNMGLAHGLAGVGCILAYAHIKGYSNEA-SLSALQKIIFIYEKFELE--R----KKQFLWKDGLVADELKKEKVIRE 269 (409)
T ss_dssp TCBEECCTTTSHHHHHHHHHHHHHHTCCCHH-HHHHHHHHHHHHHHHCCC--G----GGTTCCCSEECHHHHHHTSCCSC
T ss_pred CCCccCCchhhHHHHHHHHHHHHHhCCCChh-HHHHHHHHHHHHHHHHhc--C----CCCCcCCCccccHhhhccccccc
Confidence 123677999999977666654321 332 235677777777543210 0 00001211
Q ss_pred cCCcccccccchHHHHHHHhccccccCCCcchHHHHHHHHHHHHHccCCCCCCCCCCccCCCCCccccccccccccccCc
Q psy3913 222 YGTEYLGACHGLSGILQVLLCEKNYVKSNPDIEKDIKETVDFLLKLQMPNGNFPADLKELYSPTDAKSAANELVHWCHGA 301 (423)
Q Consensus 222 ~~~~~~G~aHG~~GI~~~Ll~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~g~wp~~~~~~~~~~~~~~~~~~~~~WChG~ 301 (423)
......+||||++||+++++.+++.++ ++.+.+.++++++.+.+. .+. ....+||||.
T Consensus 270 ~~~~~~~WChG~~Gi~~~l~~~~~~~~-d~~~~~~a~~~~~~~~~~---~~~------------------~~~~~LCHG~ 327 (409)
T 2g0d_A 270 ASFIRDAWCYGGPGISLLYLYGGLALD-NDYFVDKAEKILESAMQR---KLG------------------IDSYMICHGY 327 (409)
T ss_dssp CSCCCCCSSSSHHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHHHHH---CTT------------------CCSCCTTTSH
T ss_pred CCCCCCcCCCCCHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHHHHh---ccC------------------CCCCCCCChH
Confidence 012468999999999999999999988 788888999988888763 111 1224669999
Q ss_pred hHHHHHHHHHHHHhCcHhHHHHHHHHHHHHHH-hC--CCCCCCcccCchhhHHHHHHHHHHHc
Q psy3913 302 PGVIYLMAKAYLFWGEEKYLNSCIKCGEVIWE-KG--LLKKGPGICHGVSGNGYAFLLLYRLT 361 (423)
Q Consensus 302 ~Gi~~~l~~~~~~~~~~~~~~~a~~~~~~~~~-~g--~~~~~~~LChG~aG~~~~ll~l~~~t 361 (423)
+|++++|.++++.++++++.+.+.+..-...+ .| ....+++||+|+||++++|+++....
T Consensus 328 aG~~~~l~~l~~~~~~~~~~~~a~~~~~~~~~~~g~~~~~~~~gL~~G~AGi~~~Ll~l~~p~ 390 (409)
T 2g0d_A 328 SGLIEICSLFKRLLNTKKFDSYMEEFNVNSEQILEEYGDESGTGFLEGISGCILVLSKFEYSI 390 (409)
T ss_dssp HHHHHHHHHHHHHHCCCTTHHHHHHHHHTHHHHHHSCCSTTCSSTTTSHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHcCCcchhhccccCCCCCCceeCCHHHHHHHHHHhcCCC
Confidence 99999999999999999998887763211111 11 12457899999999999999986543
No 5
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A
Probab=98.40 E-value=0.00028 Score=67.95 Aligned_cols=282 Identities=11% Similarity=-0.007 Sum_probs=163.6
Q ss_pred CcccchhHHHHHHHHHHHHHHHhCCCCcccccC-C----CCCCcccch---HH-HHHHHHHHhhCCCCCCCcHHHHHHHH
Q psy3913 20 SLVENFTVWKEEADKIIQSVLINVDANADITKH-K----IDHTMYTGN---LG-VGYMLWYVAQSPIYASEAPTYYLKAR 90 (423)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~----~~~~ly~G~---~G-i~~~l~~l~~~~~~~d~~~~~~~~a~ 90 (423)
....+++.++++++.+++.+++.-.+..+.... + .+...+... .| ....+..+++. ++|+ +|++.+.
T Consensus 19 ~~~~~~~~~~~~l~~~~~~l~~~~~~~~~f~~~~~~~~~~d~k~~~~W~Wt~G~~~~gl~~~ye~--Tgd~--~y~~~a~ 94 (382)
T 3pmm_A 19 ERFIARSELQALIRNVTQNLVNIKDESGQFLLRLDDGRVIDTKGWAGWEWTHGVGLYGIYQYYQQ--TGDI--EMRDIID 94 (382)
T ss_dssp CCSSCHHHHHHHHHHHHHHHHHCCCTTCTTCEECTTSCEECSSSTTSCSHHHHHHHHHHHHHHHH--HCCH--HHHHHHH
T ss_pred hhcCCHHHHHHHHHHHHHHHHhccCccccccccCCccccccCCCCcCccccHHHHHHHHHHHHHH--HCCH--HHHHHHH
Confidence 344677889999999999996542221000000 0 011222222 13 44567788888 9986 9999999
Q ss_pred HHHHHHHHHhhhhccCCCCCCcccccCchHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHh--hc-c-ccCC----CC
Q psy3913 91 RYLDNLKNVLATKKHRCITDYSAFLCGDAGIHAVLGVFYNAVGDKERSQCHFDMYTKLATHIK--AI-D-YVKF----GG 162 (423)
Q Consensus 91 ~~i~~~~~~~~~~~~~~~~~~~~~~~G~aGi~~l~~~l~~~~~~~~~l~~~l~~~~~~~~~~~--~~-~-~~~~----~~ 162 (423)
++++..... . ... .+++ .+..+. .+..+|+.++++++++.+.+..+.++...- +. . |... .+
T Consensus 95 ~~~~~~~~~-~---~~~--~n~D--~~~~~~--~l~~lY~~Tgd~~Yl~~a~~~ad~L~~~~~r~~~Ggf~~~~~~~~~~ 164 (382)
T 3pmm_A 95 RWFADRFAE-G---ATT--KNVN--TMAPFL--TLAYRFEETGRMAYLPWLESWAEWAMHEMPRTEQGGMQHMTLAEENH 164 (382)
T ss_dssp HHHHHHHHH-C---CCC--CCTT--TTTTHH--HHHHHHHHHCCGGGHHHHHHHHHHHHHTSCBCGGGCBCCCCSSCCCT
T ss_pred HHHHHHHcC-C---CCc--Cccc--chHHHH--HHHHHHHHhCCHHHHHHHHHHHHHHHhhCCCCcCCCeeeecCCCCCC
Confidence 988765542 0 011 1222 123333 225679999999999888877776664311 11 0 1110 01
Q ss_pred -ccccccchhHHHHHHHHHHHhCcccCcHHHHHHHHHHHHHcCccccccccCCCCcce-ee--cC---CcccccccchHH
Q psy3913 163 -DEFLVGRAGYLAGIIWAERQLGRQIMSLEDRTAICNALILSGRSYSQANNLRCPLMY-HY--YG---TEYLGACHGLSG 235 (423)
Q Consensus 163 -~d~l~G~aG~l~~ll~l~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~-~~--~~---~~~~G~aHG~~G 235 (423)
.-++.|.--.+..+..+++.++++.+.+.+++++ ....+. ..+ ....+.+ .| .+ .....|+.|.+=
T Consensus 165 ~~~WiDgl~M~~p~La~~~~~tgd~~y~d~A~~q~-~~~~~~---l~D---~~tGl~~h~~~~~~~~~~~~~~WaRG~gW 237 (382)
T 3pmm_A 165 QQMWDDTLMMTVLPLAKIGKLLNRPQYVEEATYQF-LLHVQN---LMD---RETGLWFHGWNYEGRHNFARARWARGNSW 237 (382)
T ss_dssp TEEETTHHHHTHHHHHHHHHHTTCHHHHHHHHHHH-HHHHHH---HBC---TTTSCBCSEEETTTTBCTTCCCBHHHHHH
T ss_pred CcEEecchhhhHHHHHHHHHHHCCHHHHHHHHHHH-HHHHHH---ccC---CCCCCeeeeccCCCCCCCCcceecccccH
Confidence 1134454445556677788888875544333332 222221 000 0111111 11 11 234669999888
Q ss_pred HHHHHhcccccc--CC----CcchHHHHHHHHHHHHHccCCCCCCCCCCccCCCCCccccccccccccccCchHHHHHHH
Q psy3913 236 ILQVLLCEKNYV--KS----NPDIEKDIKETVDFLLKLQMPNGNFPADLKELYSPTDAKSAANELVHWCHGAPGVIYLMA 309 (423)
Q Consensus 236 I~~~Ll~~~~~~--~~----~~~~~~~i~~~~~~l~~~~~~~g~wp~~~~~~~~~~~~~~~~~~~~~WChG~~Gi~~~l~ 309 (423)
.+.++....+.+ +. ++.+.+.+++.++++++.|.++|.|.....+..+ ..+ --|++.+++.|+
T Consensus 238 ~~~gl~~~l~~l~~p~~~~~~~~~~~~~~~~a~~~~~~q~~~G~W~~~~d~~~~------y~E-----sSatA~~ay~ll 306 (382)
T 3pmm_A 238 LTMVIPDFLELVDLPEGNAVRRYLITVLDAQIAALAECQDDSGLWHTLLDDPHS------YLE-----ASATAGFAYGIL 306 (382)
T ss_dssp HHHHHHHHHHHHCCCTTCHHHHHHHHHHHHHHHHHHHHCCTTSCEESBTTCTTS------CEE-----HHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCCcchhhHHHHHHHHHHHHHHHHHcCCCCCChhhccCCCCC------Ccc-----ccHHHHHHHHHH
Confidence 888887777652 21 2457788889999999988889999754432110 112 347888889999
Q ss_pred HHHHH-hCcHhHHHHHHHHHHHHHH
Q psy3913 310 KAYLF-WGEEKYLNSCIKCGEVIWE 333 (423)
Q Consensus 310 ~~~~~-~~~~~~~~~a~~~~~~~~~ 333 (423)
++.+. .-+++|...|+++.+.+.+
T Consensus 307 ~~~~~g~l~~~Y~~~a~ka~~~l~~ 331 (382)
T 3pmm_A 307 KAVRKRYVGQHYAGVAEKAIRGIVQ 331 (382)
T ss_dssp HHHHTTSSCGGGHHHHHHHHHHHHH
T ss_pred HHHHcCCCcHHHHHHHHHHHHHHHh
Confidence 98873 2257899999999998875
No 6
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A
Probab=98.25 E-value=5.7e-05 Score=72.38 Aligned_cols=166 Identities=16% Similarity=0.089 Sum_probs=108.1
Q ss_pred HHHHH--HHhccccccCCCcchHHHHHHHHHHHHHccCCC-CC---CCCCCccCCCCCccccccccccccccCchHHHHH
Q psy3913 234 SGILQ--VLLCEKNYVKSNPDIEKDIKETVDFLLKLQMPN-GN---FPADLKELYSPTDAKSAANELVHWCHGAPGVIYL 307 (423)
Q Consensus 234 ~GI~~--~Ll~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~-g~---wp~~~~~~~~~~~~~~~~~~~~~WChG~~Gi~~~ 307 (423)
.|.++ ++...++.++ ++.+++.+.++.+++...+.+. |. |....+.. .. -...-++ .-++.+
T Consensus 89 ~Gf~~~~s~~~~y~ltg-~~~~~~~~~~aA~~L~~r~~~~~g~i~sw~~~~~~~-~~--~~~iID~--------mmni~~ 156 (377)
T 2ahf_A 89 IGFLYSLSAKAQWIVEK-DESARKLALDAADVLMRRWRADAGIIQAWGPKGDPE-NG--GRIIIDC--------LLNLPL 156 (377)
T ss_dssp HHHHHHTTHHHHHHHHC-CHHHHHHHHHHHHHHHTTEETTTTEECCBSSTTCTT-TT--TEEEGGG--------GGGHHH
T ss_pred chHhhHHHHHHHHHHhC-CHHHHHHHHHHHHHHHHhCCCCCCeEEeccCCCCCC-CC--ceEEech--------HHHHHH
Confidence 55543 5666778888 7899999999999999865544 32 42110000 00 0001111 123567
Q ss_pred HHHHHHHhCcHhHHHHHHHHHHHHHHhCC------------------C---------CCCCcccCchhhHHHHHHHHHHH
Q psy3913 308 MAKAYLFWGEEKYLNSCIKCGEVIWEKGL------------------L---------KKGPGICHGVSGNGYAFLLLYRL 360 (423)
Q Consensus 308 l~~~~~~~~~~~~~~~a~~~~~~~~~~g~------------------~---------~~~~~LChG~aG~~~~ll~l~~~ 360 (423)
|.++++++++++|.+.|.+.++.+.+.-+ . ..+.++..|.|-.++.++.+|+.
T Consensus 157 L~~A~~~~gd~~y~~~A~~~a~~~l~~~~r~dgs~~h~~~~D~~tG~~~~~~t~qG~~dds~WaRGqAw~i~gl~~ly~~ 236 (377)
T 2ahf_A 157 LLWAGEQTGDPEYRRVAEAHALKSRRFLVRGDDSSYHTFYFDPENGNAIRGGTHQGNTDGSTWTRGQAWGIYGFALNSRY 236 (377)
T ss_dssp HHHHHHHHCCTHHHHHHHHHHHHHHHHTBBTTSCBCSEEEECTTTCCEEEEECSSSSSTTSCBHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHhCcCCCCCeEEEEEeeCCCCCeeeCCCcCCcCCcchhHHHHHHHHHHHHHHHHH
Confidence 99999999999999999998887754211 0 12345666778899999999999
Q ss_pred cCChHHHHHHHHHHHHhhchhhhhcCC-----CCCC--CCccccchHHHHHHHHHccC
Q psy3913 361 TKDEQYLHKAYLFANFMLSDDFKRNAR-----MPDA--PFSLYEGLAGTACFFIDLMQ 411 (423)
Q Consensus 361 t~~~~~~~~a~~~~~~~~~~~~~~~~~-----~~~~--~~gl~~G~aGi~~~Ll~~~~ 411 (423)
|++++|++.|.++++++++.-...+.. .+.. .+---.+.|+.++.|+++..
T Consensus 237 T~d~~yL~~A~~la~~~l~~~~~d~~pywd~~~~~~~~~~~d~Sa~aiaA~~Ll~L~~ 294 (377)
T 2ahf_A 237 LGNADLLETAKRMARHFLARVPEDGVVYWDFEVPQEPSSYRDSSASAITACGLLEIAS 294 (377)
T ss_dssp HTCHHHHHHHHHHHHHHHTTCCTTSSCBSBTTSCCCTTSCBCHHHHHHHHHHHHHHHH
T ss_pred HCChHHHHHHHHHHHHHHHhhHHhCCcccccCCCccCCCccCCCHHHHHHHHHHHHHH
Confidence 999999999999999887542111110 0101 11123578888888888753
No 7
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A
Probab=98.10 E-value=0.00047 Score=66.41 Aligned_cols=236 Identities=11% Similarity=0.008 Sum_probs=146.2
Q ss_pred HH-HHHHHHHHHHhCChhHHHHHHHHHHHHHHHHhhccccCCCCccccccchhHHHHHHHHHHHhCcccCcHHHHHHHHH
Q psy3913 120 GI-HAVLGVFYNAVGDKERSQCHFDMYTKLATHIKAIDYVKFGGDEFLVGRAGYLAGIIWAERQLGRQIMSLEDRTAICN 198 (423)
Q Consensus 120 Gi-~~l~~~l~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~d~l~G~aG~l~~ll~l~~~~~~~~~~~~~i~~i~~ 198 (423)
|+ +..+..+++.+|++++++.+.+.++..+..... ..+.| .+..+. +++.+++.++++.+. +.+.++++
T Consensus 71 G~~~~gl~~~ye~Tgd~~y~~~a~~~~~~~~~~~~~-----~~n~D--~~~~~~--~l~~lY~~Tgd~~Yl-~~a~~~ad 140 (382)
T 3pmm_A 71 GVGLYGIYQYYQQTGDIEMRDIIDRWFADRFAEGAT-----TKNVN--TMAPFL--TLAYRFEETGRMAYL-PWLESWAE 140 (382)
T ss_dssp HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC-----CCCTT--TTTTHH--HHHHHHHHHCCGGGH-HHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHcCCCC-----cCccc--chHHHH--HHHHHHHHhCCHHHH-HHHHHHHH
Confidence 55 334456789999998887777666655432110 11222 234443 568899999988764 46778888
Q ss_pred HHHHcCccccccccCCCCcceee-cC--CcccccccchHHHHHHHhccccccCCCcchHHHHHHHHHHHHH-ccC-CCCC
Q psy3913 199 ALILSGRSYSQANNLRCPLMYHY-YG--TEYLGACHGLSGILQVLLCEKNYVKSNPDIEKDIKETVDFLLK-LQM-PNGN 273 (423)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~G~aHG~~GI~~~Ll~~~~~~~~~~~~~~~i~~~~~~l~~-~~~-~~g~ 273 (423)
.+++.... . .. ..+|.. .+ ...--|+.|..-.+..|+.+++.++ ++.+.+.+.+-.....+ +++ ++|.
T Consensus 141 ~L~~~~~r--~---~~-Ggf~~~~~~~~~~~~~WiDgl~M~~p~La~~~~~tg-d~~y~d~A~~q~~~~~~~l~D~~tGl 213 (382)
T 3pmm_A 141 WAMHEMPR--T---EQ-GGMQHMTLAEENHQQMWDDTLMMTVLPLAKIGKLLN-RPQYVEEATYQFLLHVQNLMDRETGL 213 (382)
T ss_dssp HHHHTSCB--C---GG-GCBCCCCSSCCCTTEEETTHHHHTHHHHHHHHHHTT-CHHHHHHHHHHHHHHHHHHBCTTTSC
T ss_pred HHHhhCCC--C---cC-CCeeeecCCCCCCCcEEecchhhhHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHccCCCCCC
Confidence 88753210 0 00 111111 00 1223477887777788888999998 78887766554444444 565 5787
Q ss_pred CCCCCccCCCCCccccccccccccccCchHHHHHHHHHHHHh-------CcHhHHHHHHHHHHHHHHh----CCC---CC
Q psy3913 274 FPADLKELYSPTDAKSAANELVHWCHGAPGVIYLMAKAYLFW-------GEEKYLNSCIKCGEVIWEK----GLL---KK 339 (423)
Q Consensus 274 wp~~~~~~~~~~~~~~~~~~~~~WChG~~Gi~~~l~~~~~~~-------~~~~~~~~a~~~~~~~~~~----g~~---~~ 339 (423)
|.+...... ........|+.|..=.+..+.+.++.+ +++++.+.+++.++.+.+. |+. ..
T Consensus 214 ~~h~~~~~~------~~~~~~~~WaRG~gW~~~gl~~~l~~l~~p~~~~~~~~~~~~~~~~a~~~~~~q~~~G~W~~~~d 287 (382)
T 3pmm_A 214 WFHGWNYEG------RHNFARARWARGNSWLTMVIPDFLELVDLPEGNAVRRYLITVLDAQIAALAECQDDSGLWHTLLD 287 (382)
T ss_dssp BCSEEETTT------TBCTTCCCBHHHHHHHHHHHHHHHHHHCCCTTCHHHHHHHHHHHHHHHHHHHHCCTTSCEESBTT
T ss_pred eeeeccCCC------CCCCCcceecccccHHHHHHHHHHHhhcCCcchhhHHHHHHHHHHHHHHHHHcCCCCCChhhccC
Confidence 754321110 011234679999999998898888762 3467778888888777653 322 11
Q ss_pred CC---cccCchhhHHHHHHHHHH--HcCChHHHHHHHHHHHHhhc
Q psy3913 340 GP---GICHGVSGNGYAFLLLYR--LTKDEQYLHKAYLFANFMLS 379 (423)
Q Consensus 340 ~~---~LChG~aG~~~~ll~l~~--~t~~~~~~~~a~~~~~~~~~ 379 (423)
.+ -=--|+|..++++++..+ .. +++|+..|.+..+.+.+
T Consensus 288 ~~~~y~EsSatA~~ay~ll~~~~~g~l-~~~Y~~~a~ka~~~l~~ 331 (382)
T 3pmm_A 288 DPHSYLEASATAGFAYGILKAVRKRYV-GQHYAGVAEKAIRGIVQ 331 (382)
T ss_dssp CTTSCEEHHHHHHHHHHHHHHHHTTSS-CGGGHHHHHHHHHHHHH
T ss_pred CCCCCccccHHHHHHHHHHHHHHcCCC-cHHHHHHHHHHHHHHHh
Confidence 12 223367889999999998 44 47899999998887764
No 8
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A*
Probab=98.10 E-value=0.00015 Score=69.74 Aligned_cols=158 Identities=16% Similarity=0.072 Sum_probs=103.2
Q ss_pred HhccccccCCCcchHHHHHHHHHHHHHccCCC-CC---CCCCCccCCCCCccccccccccccccCchHHHHHHHHHHHHh
Q psy3913 240 LLCEKNYVKSNPDIEKDIKETVDFLLKLQMPN-GN---FPADLKELYSPTDAKSAANELVHWCHGAPGVIYLMAKAYLFW 315 (423)
Q Consensus 240 Ll~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~-g~---wp~~~~~~~~~~~~~~~~~~~~~WChG~~Gi~~~l~~~~~~~ 315 (423)
+...++.++ ++.+++.+.++.+++...+.+. |. |... ++ ..+. .-|-=... ++.+|..+++++
T Consensus 123 ~~~~y~ltg-~~~~~~~~~~aA~~L~~r~~~~~g~iqsw~~~-~~---------~~~~-~~iID~~m-ni~~L~~A~~~~ 189 (397)
T 2zzr_A 123 CTAEYRING-DVKALEATIKAADKLMERYQEKGGFIQAWGEL-GY---------KEHY-RLIIDCLL-NIQLLFFAYEQT 189 (397)
T ss_dssp HHHHHHHHC-CHHHHHHHHHHHHHHHTTEETTTTEECCSSST-TC---------GGGC-EEETTHHH-HTHHHHHHHHHH
T ss_pred HHHHHHHhC-CHHHHHHHHHHHHHHHHHhCcCCCEEEecccC-CC---------CCCC-ceeechHh-HHHHHHHHHHHh
Confidence 444667777 7889999999999999865443 32 3211 00 0111 11221122 456789999999
Q ss_pred CcHhHHHHHHHHHHHHHHhCC------------------C---------CCCCcccCchhhHHHHHHHHHHHcCChHHHH
Q psy3913 316 GEEKYLNSCIKCGEVIWEKGL------------------L---------KKGPGICHGVSGNGYAFLLLYRLTKDEQYLH 368 (423)
Q Consensus 316 ~~~~~~~~a~~~~~~~~~~g~------------------~---------~~~~~LChG~aG~~~~ll~l~~~t~~~~~~~ 368 (423)
++++|.+.|.+.++.+.+.-+ . ..+.++..|.|-.++.++.+|+.|+|++|++
T Consensus 190 gd~~y~~~A~~ha~~~l~~~~r~dgs~~h~~~~d~~~G~~~~~~t~qGy~dds~WaRGqAw~i~gl~~lY~~T~d~~yL~ 269 (397)
T 2zzr_A 190 GDEKYRQVAVNHFYASANNVVRDDSSAFHTFYFDPETGEPLKGVTRQGYSDESSWARGQAWGIYGIPLSYRKMKDYQQII 269 (397)
T ss_dssp CCHHHHHHHHHHHHHHHHHTBCTTSCBCSEEEECTTTCCEEEEECTTSSSTTSCBHHHHHHHHHHHHHHHHHHCCHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhCcCCCCCeEEEEEeeCCCCCcccCCcccccCcchhhHHHHHHHHHHHHHHHHHHCCHHHHH
Confidence 999999999998887754221 0 1123455566888999999999999999999
Q ss_pred HHHHHHHHhhchhhhhcC-------C-CCCCCCccccchHHHHHHHHHccC
Q psy3913 369 KAYLFANFMLSDDFKRNA-------R-MPDAPFSLYEGLAGTACFFIDLMQ 411 (423)
Q Consensus 369 ~a~~~~~~~~~~~~~~~~-------~-~~~~~~gl~~G~aGi~~~Ll~~~~ 411 (423)
.|.++++++++.-...+. . .+..+.. -.|.|..++.|+++..
T Consensus 270 ~A~~la~~~l~~~~~d~~pywdt~~~~~~~~~~D-~Sa~aiaA~~Ll~L~~ 319 (397)
T 2zzr_A 270 LFKGMTNYFLNRLPEDKVSYWDLIFTDGSGQPRD-TSATATAVCGIHEMLK 319 (397)
T ss_dssp HHHHHHHHHHHTCCTTSCCBSBTTCCTTSCCCBC-HHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhhHHhCCccccCCCCCCCCCcCC-CCHHHHHHHHHHHHHH
Confidence 999999988654211111 0 1111112 4677888888988865
No 9
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}
Probab=98.05 E-value=0.0004 Score=67.09 Aligned_cols=239 Identities=12% Similarity=0.021 Sum_probs=137.3
Q ss_pred HHHHHHHHHH-hCChhHHHHHHHHHHHHHHHHhhc--ccc----CCC----CccccccchhHHHHHHHHHHHhCcccCcH
Q psy3913 122 HAVLGVFYNA-VGDKERSQCHFDMYTKLATHIKAI--DYV----KFG----GDEFLVGRAGYLAGIIWAERQLGRQIMSL 190 (423)
Q Consensus 122 ~~l~~~l~~~-~~~~~~l~~~l~~~~~~~~~~~~~--~~~----~~~----~~d~l~G~aG~l~~ll~l~~~~~~~~~~~ 190 (423)
+.+++..++. ++++.+++.+.+.+.-+....... .+. ..+ ....+.+.+=.+.+++.+++.++++.++
T Consensus 59 i~~~a~a~~~~~~~~~~~~~A~~~~~~l~~~~~~~~Gg~~~~~d~dg~~~~~~~~~~~~af~i~al~~~y~~tg~~~~l- 137 (388)
T 2gz6_A 59 VWTFSMLCNQLEKRENWLKIARNGAKFLAQHGRDDEGNWYFALTRGGEPLVQPYNIFSDCFAAMAFSQYALASGEEWAK- 137 (388)
T ss_dssp HHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHSBCTTSCBCSEECTTSCBCCCCCCHHHHHHHHHHHHHHHHHHCCHHHH-
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcccCCcchHHHHHHHHHHHHHHHHhCCHHHH-
Confidence 4555667787 788887776665555555543221 111 011 1234556666778888888889886554
Q ss_pred HHHHHHHHHHHHcCccccccccCCCCccee--ecC-CcccccccchHHHHHHHhccccccCCCcchHHHHHHHHHHHHHc
Q psy3913 191 EDRTAICNALILSGRSYSQANNLRCPLMYH--YYG-TEYLGACHGLSGILQVLLCEKNYVKSNPDIEKDIKETVDFLLKL 267 (423)
Q Consensus 191 ~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~G~aHG~~GI~~~Ll~~~~~~~~~~~~~~~i~~~~~~l~~~ 267 (423)
+.++++++.+++.-. .. .. .|. +.+ ...-+. -+.+=.+.+++.+++.++ ++.+++.+++.++.+.+.
T Consensus 138 ~~A~~~~~~i~~~~~---d~----~g-~~~~~~~~~~~~~~~-~~~~~~~~all~l~~~t~-d~~~~~~A~~~~~~~~~~ 207 (388)
T 2gz6_A 138 DVAMQAYNNVLRRKD---NP----KG-KYTKTYPGTRPMKAL-AVPMILANLTLEMEWLLP-QETLENVLAATVQEVMGD 207 (388)
T ss_dssp HHHHHHHHHHHTC----------------------CCCCEET-HHHHHHHHHHHHTGGGSC-HHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhc---CC----Cc-ccCcccCCCCCCCCC-CHHHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHHHHH
Confidence 356677777765321 00 01 110 000 111121 011123356788888888 678899999999998874
Q ss_pred c-C-CCCCCCCCCccCCCCCccccccccccccccCchH----HHHHHHHHHHHhCcHhHHHHHHHHHHHHHHhCCCCCCC
Q psy3913 268 Q-M-PNGNFPADLKELYSPTDAKSAANELVHWCHGAPG----VIYLMAKAYLFWGEEKYLNSCIKCGEVIWEKGLLKKGP 341 (423)
Q Consensus 268 ~-~-~~g~wp~~~~~~~~~~~~~~~~~~~~~WChG~~G----i~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~g~~~~~~ 341 (423)
. + +.|..+.......++.+ ....+ . =.|| .+..|++++.+++++++.+.|+++.+.+++.|.-....
T Consensus 208 ~~~~~~g~~~e~~~~~w~~~~-~~~~~-~-----~~pgh~~e~a~lL~~~~~~tgd~~~~~~A~~~~~~~~~~g~d~~~G 280 (388)
T 2gz6_A 208 FLDQEQGLMYENVAPDGSHID-CFEGR-L-----INPGHGIEAMWFIMDIARRKNDSKTINQAVDVVLNILNFAWDNEYG 280 (388)
T ss_dssp TEETTTTEECSEECTTSCCCC-STTTT-E-----ECHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHBCTTTC
T ss_pred HhccCCCeEEEEECCCCCCCC-CcccC-c-----CCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhccCCCC
Confidence 3 2 33321110000000000 00000 0 1233 34568899999999999999999999888776532224
Q ss_pred cccCch--------------------hhHHHHHHHHHHHcCChHHHHHHHHHHHHhh
Q psy3913 342 GICHGV--------------------SGNGYAFLLLYRLTKDEQYLHKAYLFANFML 378 (423)
Q Consensus 342 ~LChG~--------------------aG~~~~ll~l~~~t~~~~~~~~a~~~~~~~~ 378 (423)
+++|.. +=.+.+++.+|+.|++++|++.+.++.+++.
T Consensus 281 g~~~~~~~~g~~~~~~~~~~~~~W~qae~i~a~~~ly~~tgd~~yl~~a~~~~~~~~ 337 (388)
T 2gz6_A 281 GLYYFMDAAGHPPQQLEWDQKLWWVHLESLVALAMGYRLTGRDACWAWYQKMHDYSW 337 (388)
T ss_dssp SBCSCEETTSCCCSCTTTTCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_pred CEEEeecCCCCccccCcCCCcCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 555532 1136677889999999999999999888764
No 10
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A
Probab=97.97 E-value=0.00086 Score=64.20 Aligned_cols=260 Identities=13% Similarity=0.063 Sum_probs=153.1
Q ss_pred HHHHHhhCCCCCCCcHHHHHHHHHHHHHHHHHhhhhccCCCCCCcccccCchHHHHHHHHHHHHhCChhHHHHHHHHHHH
Q psy3913 68 MLWYVAQSPIYASEAPTYYLKARRYLDNLKNVLATKKHRCITDYSAFLCGDAGIHAVLGVFYNAVGDKERSQCHFDMYTK 147 (423)
Q Consensus 68 ~l~~l~~~~~~~d~~~~~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~G~aGi~~l~~~l~~~~~~~~~l~~~l~~~~~ 147 (423)
.++.+++. |+|+ ++++.|.++.+.+.+.+.++...++ .+.+|+.. ..+...++.+|++++.+.+++.++.
T Consensus 50 ~lw~~ye~--Tgd~--~~~~~a~~~~~~l~~~~~~~~~~~~-HD~Gf~~~-----~s~~~~y~ltg~~~~~~~~~~aA~~ 119 (377)
T 2ahf_A 50 ILWLCYEY--TGDE--QYREGAVRTVASFRERLDRFENLDH-HNIGFLYS-----LSAKAQWIVEKDESARKLALDAADV 119 (377)
T ss_dssp HHHHHHHH--HCCH--HHHHHHHHHHHHHHHHHTTTTTCCB-STHHHHHH-----TTHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred HHHHHHHH--hCCH--HHHHHHHHHHHHHHHhhhcccCCCC-CCchHhhH-----HHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 45566667 8886 8999999997777665532111110 23333211 1234567889999888888888777
Q ss_pred HHHHHhh-----ccccCCCCc----cc-cccchhHHHHHHHHHHHhCcccCcHHHHHHHHHHHHHcCc-----ccccc--
Q psy3913 148 LATHIKA-----IDYVKFGGD----EF-LVGRAGYLAGIIWAERQLGRQIMSLEDRTAICNALILSGR-----SYSQA-- 210 (423)
Q Consensus 148 ~~~~~~~-----~~~~~~~~~----d~-l~G~aG~l~~ll~l~~~~~~~~~~~~~i~~i~~~~~~~~~-----~~~~~-- 210 (423)
++....+ ..|...... .+ +--+-- +.+|....+.++++.+.+ ...+-++.+++.-. .+-..
T Consensus 120 L~~r~~~~~g~i~sw~~~~~~~~~~~~iID~mmn-i~~L~~A~~~~gd~~y~~-~A~~~a~~~l~~~~r~dgs~~h~~~~ 197 (377)
T 2ahf_A 120 LMRRWRADAGIIQAWGPKGDPENGGRIIIDCLLN-LPLLLWAGEQTGDPEYRR-VAEAHALKSRRFLVRGDDSSYHTFYF 197 (377)
T ss_dssp HHTTEETTTTEECCBSSTTCTTTTTEEEGGGGGG-HHHHHHHHHHHCCTHHHH-HHHHHHHHHHHHTBBTTSCBCSEEEE
T ss_pred HHHhCCCCCCeEEeccCCCCCCCCceEEechHHH-HHHHHHHHHHhCCHHHHH-HHHHHHHHHHHhCcCCCCCeEEEEEe
Confidence 7754221 134321111 11 111222 557777788898876643 44555566655321 11000
Q ss_pred ccCCCCcce--eecC-CcccccccchHHHHHHHhccccccCCCcchHHHHHHHHHHHHHccCCCC--CCCCCCccCCCCC
Q psy3913 211 NNLRCPLMY--HYYG-TEYLGACHGLSGILQVLLCEKNYVKSNPDIEKDIKETVDFLLKLQMPNG--NFPADLKELYSPT 285 (423)
Q Consensus 211 ~~~~~~~~~--~~~~-~~~~G~aHG~~GI~~~Ll~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~g--~wp~~~~~~~~~~ 285 (423)
+........ ...| .....|++|.+-.+++++.+++.++ ++.+++.+++..+++++...+++ .|-...+...
T Consensus 198 D~~tG~~~~~~t~qG~~dds~WaRGqAw~i~gl~~ly~~T~-d~~yL~~A~~la~~~l~~~~~d~~pywd~~~~~~~--- 273 (377)
T 2ahf_A 198 DPENGNAIRGGTHQGNTDGSTWTRGQAWGIYGFALNSRYLG-NADLLETAKRMARHFLARVPEDGVVYWDFEVPQEP--- 273 (377)
T ss_dssp CTTTCCEEEEECSSSSSTTSCBHHHHHHHHHHHHHHHHHHT-CHHHHHHHHHHHHHHHTTCCTTSSCBSBTTSCCCT---
T ss_pred eCCCCCeeeCCCcCCcCCcchhHHHHHHHHHHHHHHHHHHC-ChHHHHHHHHHHHHHHHhhHHhCCcccccCCCccC---
Confidence 000000001 1112 1235799999999999999999998 78999999999999999764444 3522211110
Q ss_pred ccccccccccccccCchHHHHHHHHHHHHhC-----cHhHHHHHHHHHHHHHHhCCC----CCCCcccCchhhH
Q psy3913 286 DAKSAANELVHWCHGAPGVIYLMAKAYLFWG-----EEKYLNSCIKCGEVIWEKGLL----KKGPGICHGVSGN 350 (423)
Q Consensus 286 ~~~~~~~~~~~WChG~~Gi~~~l~~~~~~~~-----~~~~~~~a~~~~~~~~~~g~~----~~~~~LChG~aG~ 350 (423)
..+.- =.++++.+..|+++++.++ +++|.+.|+++++.+...-+. ..+.-|-||+.+.
T Consensus 274 ----~~~~d---~Sa~aiaA~~Ll~L~~~~~~~~~~~~~Y~~~A~~~l~~l~~~y~~~~~~~~~g~L~h~~~~~ 340 (377)
T 2ahf_A 274 ----SSYRD---SSASAITACGLLEIASQLDESDPERQRFIDAAKTTVTALRDGYAERDDGEAEGFIRRGSYHV 340 (377)
T ss_dssp ----TSCBC---HHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHHHHHHTBCCCCSSCCCSBSCBCSBT
T ss_pred ----CCccC---CCHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecccccC
Confidence 01111 2466788888999999885 678999999999888653221 1234566777654
No 11
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A*
Probab=97.95 E-value=0.00051 Score=66.09 Aligned_cols=258 Identities=12% Similarity=0.062 Sum_probs=149.7
Q ss_pred HHHHHhhCCCCCCCcHHHHHHHHHHHHHHHHHhhhhccCCCCCCcccccCchHHHHHHHHHHHHhCChhHHHHHHHHHHH
Q psy3913 68 MLWYVAQSPIYASEAPTYYLKARRYLDNLKNVLATKKHRCITDYSAFLCGDAGIHAVLGVFYNAVGDKERSQCHFDMYTK 147 (423)
Q Consensus 68 ~l~~l~~~~~~~d~~~~~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~G~aGi~~l~~~l~~~~~~~~~l~~~l~~~~~ 147 (423)
.++.+++. |+|+ ++++.|.++.+.+.+.+..+...++ ++.||....+ +...++.+|++++.+.+++.++.
T Consensus 76 ~lw~~ye~--Tgd~--~~~~~a~~~~~~l~~~~~~~~~~~~-HD~GF~~~~s-----~~~~y~ltg~~~~~~~~~~aA~~ 145 (397)
T 2zzr_A 76 CLWLAYEY--NQDK--KLKNIAHKNVLSFLNRINNRIALDH-HDLGFLYTPS-----CTAEYRINGDVKALEATIKAADK 145 (397)
T ss_dssp HHHHHHHH--HCCH--HHHHHHHHHHHHHHHHHHTTCSCCS-STHHHHHTTT-----HHHHHHHHCCHHHHHHHHHHHHH
T ss_pred HHHHHHHH--HCCH--HHHHHHHHHHHHHHHhhhhcccCCC-CCchHHHHHH-----HHHHHHHhCCHHHHHHHHHHHHH
Confidence 34566666 8886 8999999988777665542111111 3444443321 23457889999988888888877
Q ss_pred HHHHHhh-----ccccCCCC-cc--cc-ccchhHHHHHHHHHHHhCcccCcHHHHHHHHHHHHHcCc-----cccccc-c
Q psy3913 148 LATHIKA-----IDYVKFGG-DE--FL-VGRAGYLAGIIWAERQLGRQIMSLEDRTAICNALILSGR-----SYSQAN-N 212 (423)
Q Consensus 148 ~~~~~~~-----~~~~~~~~-~d--~l-~G~aG~l~~ll~l~~~~~~~~~~~~~i~~i~~~~~~~~~-----~~~~~~-~ 212 (423)
++....+ ..|..... .+ ++ -..- -+.+|....+.++++.+.+ ...+-++.+++.-. .+.... +
T Consensus 146 L~~r~~~~~g~iqsw~~~~~~~~~~~iID~~m-ni~~L~~A~~~~gd~~y~~-~A~~ha~~~l~~~~r~dgs~~h~~~~d 223 (397)
T 2zzr_A 146 LMERYQEKGGFIQAWGELGYKEHYRLIIDCLL-NIQLLFFAYEQTGDEKYRQ-VAVNHFYASANNVVRDDSSAFHTFYFD 223 (397)
T ss_dssp HHTTEETTTTEECCSSSTTCGGGCEEETTHHH-HTHHHHHHHHHHCCHHHHH-HHHHHHHHHHHHTBCTTSCBCSEEEEC
T ss_pred HHHHhCcCCCEEEecccCCCCCCCceeechHh-HHHHHHHHHHHhCCHHHHH-HHHHHHHHHHHhCcCCCCCeEEEEEee
Confidence 7754311 13431111 11 11 1111 2455666677788876643 44455555554321 100000 0
Q ss_pred --CCCCc-ceeecC-CcccccccchHHHHHHHhccccccCCCcchHHHHHHHHHHHHHccCCCC--CCCCCCccCCCCCc
Q psy3913 213 --LRCPL-MYHYYG-TEYLGACHGLSGILQVLLCEKNYVKSNPDIEKDIKETVDFLLKLQMPNG--NFPADLKELYSPTD 286 (423)
Q Consensus 213 --~~~~~-~~~~~~-~~~~G~aHG~~GI~~~Ll~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~g--~wp~~~~~~~~~~~ 286 (423)
...+. -+...| .....|+.|.+-.+++++.+++.++ ++.+++.+++..+++++...+++ .|-...+....
T Consensus 224 ~~~G~~~~~~t~qGy~dds~WaRGqAw~i~gl~~lY~~T~-d~~yL~~A~~la~~~l~~~~~d~~pywdt~~~~~~~--- 299 (397)
T 2zzr_A 224 PETGEPLKGVTRQGYSDESSWARGQAWGIYGIPLSYRKMK-DYQQIILFKGMTNYFLNRLPEDKVSYWDLIFTDGSG--- 299 (397)
T ss_dssp TTTCCEEEEECTTSSSTTSCBHHHHHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHTCCTTSCCBSBTTCCTTSC---
T ss_pred CCCCCcccCCcccccCcchhhHHHHHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHhhHHhCCccccCCCCCCCC---
Confidence 01110 000112 1123799999999999999999999 78999999999999998654333 45322221100
Q ss_pred cccccccccccccCchHHHHHHHHHHHHhCc---Hh--HHHHHHHHHHHHHHhCCC----CCCCcccCchh
Q psy3913 287 AKSAANELVHWCHGAPGVIYLMAKAYLFWGE---EK--YLNSCIKCGEVIWEKGLL----KKGPGICHGVS 348 (423)
Q Consensus 287 ~~~~~~~~~~WChG~~Gi~~~l~~~~~~~~~---~~--~~~~a~~~~~~~~~~g~~----~~~~~LChG~a 348 (423)
...+ =.|++..+..|+++++.+++ ++ |.+.|+++++.+...-.. ..+.-|.||+.
T Consensus 300 --~~~D-----~Sa~aiaA~~Ll~L~~~~~~~~~~~~~Y~~~A~~~l~~l~~~y~~~~~~~~~glL~h~~~ 363 (397)
T 2zzr_A 300 --QPRD-----TSATATAVCGIHEMLKYLPEVDPDKETYKYAMHTMLRSLIEQYSNNELIAGRPLLLHGVY 363 (397)
T ss_dssp --CCBC-----HHHHHHHHHHHHHHHTTSCTTCTTHHHHHHHHHHHHHHHHHHTBCCCCCTTCCSBCCEEE
T ss_pred --CcCC-----CCHHHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHHHHHhccCCCCCCceeeecee
Confidence 0111 25677777889999988876 67 999999999888654221 12344666653
No 12
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua}
Probab=97.91 E-value=0.00012 Score=69.64 Aligned_cols=211 Identities=15% Similarity=-0.064 Sum_probs=124.9
Q ss_pred chhHHHHHHHHHHHhCcccCcHHHHHHHHHHHHHcCccccccccCCCCcceeecCCcccccccchHHHHHHHhccccccC
Q psy3913 169 RAGYLAGIIWAERQLGRQIMSLEDRTAICNALILSGRSYSQANNLRCPLMYHYYGTEYLGACHGLSGILQVLLCEKNYVK 248 (423)
Q Consensus 169 ~aG~l~~ll~l~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~aHG~~GI~~~Ll~~~~~~~ 248 (423)
.+|.+-+++..++.++++.+. +.+++..+.+..... ...+ .++-|=.+=.+++++.+++.++
T Consensus 48 ~a~~~~~l~d~~~~tgd~~y~-~~a~~~~~~~~~~~~-------~~~~----------~~~~DD~a~~~la~~~aye~t~ 109 (349)
T 3k7x_A 48 LAHLVEVRLDAYLRTKKQADL-EVAEKTYLHNKNRNG-------GTLI----------HDFYDDMLWNALAAYRLYKATG 109 (349)
T ss_dssp HHHHHHHHHHHHHHHCCHHHH-HHHHHHHHHHHHHTT-------SSSC----------CSBHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHhCCHHHH-HHHHHHHHHHHhcCC-------CCCC----------ccCccHHHHHHHHHHHHHHHHC
Confidence 356667778888889886543 345555554443110 0001 1112222224578888999998
Q ss_pred CCcchHHHHHHHHHHH-HHccCC--CCC--CCCCCccCCCCCccccccccccccccCchHHHHHHHHHHHHhCcHhHHHH
Q psy3913 249 SNPDIEKDIKETVDFL-LKLQMP--NGN--FPADLKELYSPTDAKSAANELVHWCHGAPGVIYLMAKAYLFWGEEKYLNS 323 (423)
Q Consensus 249 ~~~~~~~~i~~~~~~l-~~~~~~--~g~--wp~~~~~~~~~~~~~~~~~~~~~WChG~~Gi~~~l~~~~~~~~~~~~~~~ 323 (423)
++.+++.++...+++ ....++ .|. |... ....-.. | +..-.+.+++++++.++|++|++.
T Consensus 110 -~~~yL~~A~~l~~~l~~~~wd~~~gGGi~W~~~------------~~~~kna-i-sN~~~~~~la~l~~~tgd~~Yl~~ 174 (349)
T 3k7x_A 110 -KSIYLEDAQLVWQDLVDTGWNDIMGGGFAWRRP------------QMYYKNT-P-VNAPFIILSCWLYNELNETKYLEW 174 (349)
T ss_dssp -CHHHHHHHHHHHHHHHHHTBCSGGGSCBEEETT------------EEEEEEH-H-HHHHHHHHHHHHHHHHCCHHHHHH
T ss_pred -CchHHHHHHHHHHHHHHhCCCCCCCCceEecCC------------Cccccch-h-hHHHHHHHHHHHHHHhCCHHHHHH
Confidence 789999999999998 454332 232 4210 0011111 2 455566778899999999999999
Q ss_pred HHHHHHHHHHhCCCCCCCcccCchh------------------hHHHHHHHHHHHcCChHHHHHHHHHHHHhhchhhhhc
Q psy3913 324 CIKCGEVIWEKGLLKKGPGICHGVS------------------GNGYAFLLLYRLTKDEQYLHKAYLFANFMLSDDFKRN 385 (423)
Q Consensus 324 a~~~~~~~~~~g~~~~~~~LChG~a------------------G~~~~ll~l~~~t~~~~~~~~a~~~~~~~~~~~~~~~ 385 (423)
|+++.+.+.+ ++...+..+..|.. =.+..+..+|+.|+|++|+++|.++++.++..-+..+
T Consensus 175 A~~~~~w~~~-~l~d~~g~v~Dg~~~~~~g~~~~~~~~tYnqg~~l~g~~~LY~~T~d~~yl~~a~~l~~~~~~~f~~~g 253 (349)
T 3k7x_A 175 AMKTYEWQTK-VLVREDGFVEDGINRLEDGTIDYEWKFTYNQGVYIGANLELYRITKEAIYLDTANKTAAISLKELTEDG 253 (349)
T ss_dssp HHHHHHHHHH-HHBCTTSCBCCEECTTSSSCBCTTCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEETT
T ss_pred HHHHHHHHHh-cCCCCCCeEecCCccCCCCccCCcCeeeHHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHHhccCC
Confidence 9999988765 22211122222221 1567788999999999999999999998765433322
Q ss_pred CCCC---CCCCccccchHHHHHHHHHccCcc
Q psy3913 386 ARMP---DAPFSLYEGLAGTACFFIDLMQPE 413 (423)
Q Consensus 386 ~~~~---~~~~gl~~G~aGi~~~Ll~~~~p~ 413 (423)
.... ....+.|.|+.=..+..+..+.|.
T Consensus 254 i~~~~~~~~D~~sFkgi~~r~L~~l~~~~p~ 284 (349)
T 3k7x_A 254 IFKDEGNGGDEGLFKGIFYRYFTDLIEETAN 284 (349)
T ss_dssp EECCCCSSSGGGGHHHHHHHHHHHHHHHHTC
T ss_pred cccCCCCCccHHHHHHHHHHHHHHHHHHCCh
Confidence 2111 122245555554445444444443
No 13
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=97.74 E-value=0.0072 Score=58.93 Aligned_cols=297 Identities=10% Similarity=-0.087 Sum_probs=164.2
Q ss_pred CCCCCCCcccchhHHHHHHHHHHHHHHHhCCCCcc---cccC-------C-------CCCCc--ccchHHHHHHHHHHhh
Q psy3913 14 DLNKGGSLVENFTVWKEEADKIIQSVLINVDANAD---ITKH-------K-------IDHTM--YTGNLGVGYMLWYVAQ 74 (423)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~~~-------~-------~~~~l--y~G~~Gi~~~l~~l~~ 74 (423)
|+|.-+....+.+++++.+...++.+.++.+.... ..+. + ..... |.- +-.+..+.++++
T Consensus 18 ~~~~~~~~~~~~~~i~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~-Gv~l~gl~~ay~ 96 (445)
T 3k11_A 18 PAYQGTYGDLTPEQVKKDIDRVFAYIDKETPARVVDKNTGKVITDYTAMGDEAQLERGAFRLASYEW-GVTYSALIAAAE 96 (445)
T ss_dssp CCCSSCCSCCCHHHHHHHHHHHHHHHHHTSCCCEEETTTCCEECCTTTCCTTEEECCCSSCTTSHHH-HHHHHHHHHHHH
T ss_pred CCCCCCCCcCCHHHHHHHHHHHHHHHhccCcceeecCCCCceeccccccccccccccCCcccCccCH-HHHHHHHHHHHH
Confidence 55655556678899999999888888885543210 0000 0 01111 332 445566888999
Q ss_pred CCCCCCCcHHHHHHHHHHHHHHHHHhh---h--hccCCCC------CCcccccCchHHHHHHHHHHHHhCChhHHHHHHH
Q psy3913 75 SPIYASEAPTYYLKARRYLDNLKNVLA---T--KKHRCIT------DYSAFLCGDAGIHAVLGVFYNAVGDKERSQCHFD 143 (423)
Q Consensus 75 ~~~~~d~~~~~~~~a~~~i~~~~~~~~---~--~~~~~~~------~~~~~~~G~aGi~~l~~~l~~~~~~~~~l~~~l~ 143 (423)
. ++|+ +|++.+.+.++-+.+.+. + +...... ...+.+.=.+.+.+.+..+++.++++++++.+.+
T Consensus 97 ~--Tgd~--kY~~ya~~~~dfi~~~~p~~~~~~~~~G~l~~~~r~~~~~~~LDD~g~~~~~Li~lY~~T~d~~yl~~a~~ 172 (445)
T 3k11_A 97 T--TGDK--RYTDYVQNRFRFLAEVAPHFKRVYEEKGKTDSQLLQILTPHALDDAGAVCTAMIKLRLKDESLPVDGLIQN 172 (445)
T ss_dssp H--HCCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHSCCSGGGTHHHHHHHHHHHHHCTTCCCHHHHHH
T ss_pred H--HCCH--HHHHHHHHHHHHHHhccchhhhhhhccCCeecccccccCCCcchhHHHHHHHHHHHHHhcCCHHHHHHHHH
Confidence 9 9986 899999888875543211 0 0011100 0112222222333444577888999888888777
Q ss_pred HHHHHHHHHh--hcc--ccCCC--CccccccchhHHHHHHHHHHHhCccc--CcHHHHHHHHHHHHHcCccccccccCCC
Q psy3913 144 MYTKLATHIK--AID--YVKFG--GDEFLVGRAGYLAGIIWAERQLGRQI--MSLEDRTAICNALILSGRSYSQANNLRC 215 (423)
Q Consensus 144 ~~~~~~~~~~--~~~--~~~~~--~~d~l~G~aG~l~~ll~l~~~~~~~~--~~~~~i~~i~~~~~~~~~~~~~~~~~~~ 215 (423)
.++.++...- +.+ |.... ..-++-|.-=.+..+..+...++++. +.+.+++++.. ..+. ..+ ...
T Consensus 173 ~ad~L~~~~pRt~~Ggf~h~~~~~~q~WiD~lyM~~pfla~~~~~tgd~~~~y~d~A~~q~~~-~~~~---l~D---~~t 245 (445)
T 3k11_A 173 YFDFIINKEYRLADGTFARNRPQRNTLWLDDMFMGIPAVAQMSRYDKEAKNKYLAEAVKQFLQ-FADR---MFI---PEK 245 (445)
T ss_dssp HHHHHHHTSCBCTTCCBCBCSSSTTEEETHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHH-HHHH---HEE---TTT
T ss_pred HHHHHHHcCCCCCCCceeecCCCCCceEecchhhHHHHHHHHHHHHCCcchHHHHHHHHHHHH-HHHh---ccc---CCC
Confidence 7776665421 111 22111 11134454334455556666777765 44444333321 1111 100 111
Q ss_pred Ccce-eecC----CcccccccchHHHHHHHhccccccCC----CcchHHHHHHHHHHHHHccCCCCCCCCCCccCCCCCc
Q psy3913 216 PLMY-HYYG----TEYLGACHGLSGILQVLLCEKNYVKS----NPDIEKDIKETVDFLLKLQMPNGNFPADLKELYSPTD 286 (423)
Q Consensus 216 ~~~~-~~~~----~~~~G~aHG~~GI~~~Ll~~~~~~~~----~~~~~~~i~~~~~~l~~~~~~~g~wp~~~~~~~~~~~ 286 (423)
.+++ .|.. ....-|+-|..=.+.++..+.+.++. .+.+.+.+++.++.+++.|.++|.|.....+..+
T Consensus 246 GL~~Hg~~~~~~~~~~~~WaRGnGW~~~gl~~~l~~lp~~~~~r~~l~~~~~~~a~~l~~~Q~~~G~W~~vld~~~~--- 322 (445)
T 3k11_A 246 GLYRHGWVESSTDHPAFCWARANGWALLTACELLDVLPEDYPQRPKVMDYFRAHVRGVTALQSGEGFWHQLLDCNDS--- 322 (445)
T ss_dssp TEECSEEETTCSSCCCCCBHHHHHHHHHHHHHHHHHSCTTCTTHHHHHHHHHHHHHHHHTTCCTTSCEESBTTCTTS---
T ss_pred CCEeeeecCCCCCCCcceecccchHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHHhCCCCCchhhccCCCCC---
Confidence 1111 1111 12346777776666666666655432 2457778888999999988889999644332100
Q ss_pred cccccccccccccCchHHHHHHHHHHHH--hCcHhHHHHHHHHHHHHHH
Q psy3913 287 AKSAANELVHWCHGAPGVIYLMAKAYLF--WGEEKYLNSCIKCGEVIWE 333 (423)
Q Consensus 287 ~~~~~~~~~~WChG~~Gi~~~l~~~~~~--~~~~~~~~~a~~~~~~~~~ 333 (423)
... --|++.+++.++++.+. +..++|...|+++.+.+.+
T Consensus 323 ---y~E-----sSaTAmfaygllkgvr~G~Ld~~~Y~~~A~ka~~~L~~ 363 (445)
T 3k11_A 323 ---YLE-----TSATAIYVYCLAHAINKGWIDAIAYGPVAQLGWHAVAG 363 (445)
T ss_dssp ---CEE-----HHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHT
T ss_pred ---CCC-----ccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence 112 34788888889888764 3345799999999988764
No 14
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua}
Probab=97.53 E-value=0.011 Score=56.01 Aligned_cols=240 Identities=13% Similarity=0.069 Sum_probs=135.6
Q ss_pred hHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHhhccccCCCCccccccchhHHHHHHHHHHHhCcccCcHHHHHHHHH
Q psy3913 119 AGIHAVLGVFYNAVGDKERSQCHFDMYTKLATHIKAIDYVKFGGDEFLVGRAGYLAGIIWAERQLGRQIMSLEDRTAICN 198 (423)
Q Consensus 119 aGi~~l~~~l~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~d~l~G~aG~l~~ll~l~~~~~~~~~~~~~i~~i~~ 198 (423)
+|.+-.+...++.+|++++.+.+.+.+..+... ....+...-.+| .|. .+.+++.+++.++++.++ +..+++.+
T Consensus 49 a~~~~~l~d~~~~tgd~~y~~~a~~~~~~~~~~-~~~~~~~~~~DD--~a~--~~la~~~aye~t~~~~yL-~~A~~l~~ 122 (349)
T 3k7x_A 49 AHLVEVRLDAYLRTKKQADLEVAEKTYLHNKNR-NGGTLIHDFYDD--MLW--NALAAYRLYKATGKSIYL-EDAQLVWQ 122 (349)
T ss_dssp HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH-TTSSSCCSBHHH--HHH--HHHHHHHHHHHHCCHHHH-HHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhc-CCCCCCccCccH--HHH--HHHHHHHHHHHHCCchHH-HHHHHHHH
Confidence 455555566788999988776665554433322 110111111122 122 346888889999887654 35567777
Q ss_pred HHHHcCccccccccCCCCcceeecCCcccccccchHHHHHHHhccccccCCCcchHHHHHHHHHHHHHc-cCCCCCCCCC
Q psy3913 199 ALILSGRSYSQANNLRCPLMYHYYGTEYLGACHGLSGILQVLLCEKNYVKSNPDIEKDIKETVDFLLKL-QMPNGNFPAD 277 (423)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~aHG~~GI~~~Ll~~~~~~~~~~~~~~~i~~~~~~l~~~-~~~~g~wp~~ 277 (423)
.++... |.. .....+.|......+-..+ +.+-.+.+++++++.++ ++.+++.++++.+|+.+. .+++|..-+.
T Consensus 123 ~l~~~~--wd~--~~gGGi~W~~~~~~~knai-sN~~~~~~la~l~~~tg-d~~Yl~~A~~~~~w~~~~l~d~~g~v~Dg 196 (349)
T 3k7x_A 123 DLVDTG--WND--IMGGGFAWRRPQMYYKNTP-VNAPFIILSCWLYNELN-ETKYLEWAMKTYEWQTKVLVREDGFVEDG 196 (349)
T ss_dssp HHHHHT--BCS--GGGSCBEEETTEEEEEEHH-HHHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHBCTTSCBCCE
T ss_pred HHHHhC--CCC--CCCCceEecCCCccccchh-hHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHhcCCCCCCeEecC
Confidence 774322 211 0112233332111122222 55556677777888888 789999999999999873 3444543322
Q ss_pred CccCCCCCccccccccccccccCchHHHHHHHHHHHHhCcHhHHHHHHHHHHHHHH----hCCCCCCCcccCch--hhHH
Q psy3913 278 LKELYSPTDAKSAANELVHWCHGAPGVIYLMAKAYLFWGEEKYLNSCIKCGEVIWE----KGLLKKGPGICHGV--SGNG 351 (423)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~WChG~~Gi~~~l~~~~~~~~~~~~~~~a~~~~~~~~~----~g~~~~~~~LChG~--aG~~ 351 (423)
..... + ........|=++..=++..+..+|+.++|+++++.+++..+.+.+ .|++.. .+ |.|. +..+
T Consensus 197 ~~~~~-~----g~~~~~~~~tYnqg~~l~g~~~LY~~T~d~~yl~~a~~l~~~~~~~f~~~gi~~~-~~-~~~D~~sFkg 269 (349)
T 3k7x_A 197 INRLE-D----GTIDYEWKFTYNQGVYIGANLELYRITKEAIYLDTANKTAAISLKELTEDGIFKD-EG-NGGDEGLFKG 269 (349)
T ss_dssp ECTTS-S----SCBCTTCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEETTEECC-CC-SSSGGGGHHH
T ss_pred CccCC-C----CccCCcCeeeHHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHHhccCCcccC-CC-CCccHHHHHH
Confidence 11000 0 001111245444444667788899999999999999999887754 344332 22 3343 4444
Q ss_pred HH---HHHHHHHcCChHHHHHHHHHHHHh
Q psy3913 352 YA---FLLLYRLTKDEQYLHKAYLFANFM 377 (423)
Q Consensus 352 ~~---ll~l~~~t~~~~~~~~a~~~~~~~ 377 (423)
++ |..+++.++++.|+...++-++.+
T Consensus 270 i~~r~L~~l~~~~p~~~~~~~l~~sa~aa 298 (349)
T 3k7x_A 270 IFYRYFTDLIEETANKTYRDFVLNSCQIL 298 (349)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCChHHHHHHHHHHHHHH
Confidence 44 455667778877776666665554
No 15
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A*
Probab=97.46 E-value=0.0033 Score=60.35 Aligned_cols=246 Identities=13% Similarity=-0.004 Sum_probs=131.6
Q ss_pred hHH-HHHHHHHHHHhCChhHHHHHHHHHHHHHHHHhhccccCCCCccccccchhHHHHHHHHHHHhCcccCcHHHHHHHH
Q psy3913 119 AGI-HAVLGVFYNAVGDKERSQCHFDMYTKLATHIKAIDYVKFGGDEFLVGRAGYLAGIIWAERQLGRQIMSLEDRTAIC 197 (423)
Q Consensus 119 aGi-~~l~~~l~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~d~l~G~aG~l~~ll~l~~~~~~~~~~~~~i~~i~ 197 (423)
.|+ +..+..+++.+|++++++.+.+.++.++.......|.....++.. .+.+++.+++.++++++. +.+.++.
T Consensus 43 ~G~~~~gl~~~y~~tgd~~y~~~a~~~~~~~~~~~g~l~~~~~~lDd~~-----~g~~ll~lY~~Tgd~~yl-~~a~~la 116 (373)
T 1nc5_A 43 QGVFLCGVLRLWEATGEKRYFEYAKAYADLLIDDNGNLLFRRDELDAIQ-----AGLILFPLYEQTKDERYV-KAAKRLR 116 (373)
T ss_dssp HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHBCTTCCBCCCTTCGGGTG-----GGGGHHHHHHHHCCHHHH-HHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhCCCCcccCCCCCcchHH-----HHHHHHHHHHHhCCHHHH-HHHHHHH
Confidence 455 334456789999998777666665544321001112111112222 234778889989886442 3444555
Q ss_pred HHHHHcCccccccccCCCCcceeecCCcccccccchHHHHHHHhccccccCCCcchHHHHHHHHHHHHHc-cC-CCCCCC
Q psy3913 198 NALILSGRSYSQANNLRCPLMYHYYGTEYLGACHGLSGILQVLLCEKNYVKSNPDIEKDIKETVDFLLKL-QM-PNGNFP 275 (423)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~aHG~~GI~~~Ll~~~~~~~~~~~~~~~i~~~~~~l~~~-~~-~~g~wp 275 (423)
+.+....+ ......|...+...--|+-|..-.+..|+.+++.++ ++++.+.+.+.++...+. ++ ++|.|.
T Consensus 117 ~~l~~~~r-------~~~G~fw~~~~~~~~~w~D~l~m~~p~L~~l~~~tg-d~~y~d~A~~~~~~~~~~l~D~~tGl~~ 188 (373)
T 1nc5_A 117 SLYGTLNR-------TSEGGFWHKDGYPYQMWLDGLYMGGPFALKYANLKQ-ETELFDQVVLQESLMRKHTKDAKTGLFY 188 (373)
T ss_dssp GGGGTSCB-------CTTSCBCSCTTSTTEEETHHHHHHHHHHHHHHHHHT-CTHHHHHHHHHHHHHHHHHBCTTTSCBC
T ss_pred HHHHhccC-------CCCCCeeccCCCCCeEEeCcHHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHhcCCCCCCEE
Confidence 54432111 111112211111223477887766778889999998 788888888877777763 54 567664
Q ss_pred CCCccCCC-CCccccccccccccccCchHHHHHHHHHHHH-----hCcHhHHHHHHHHHHHHHHh-----CCCCCCCccc
Q psy3913 276 ADLKELYS-PTDAKSAANELVHWCHGAPGVIYLMAKAYLF-----WGEEKYLNSCIKCGEVIWEK-----GLLKKGPGIC 344 (423)
Q Consensus 276 ~~~~~~~~-~~~~~~~~~~~~~WChG~~Gi~~~l~~~~~~-----~~~~~~~~~a~~~~~~~~~~-----g~~~~~~~LC 344 (423)
........ +-..+..+.....|.-|..=.+..+.+.++. .+++++.+.+++.++.+.+. |+.. .-++
T Consensus 189 h~~~~~~~~~w~d~~tg~~~~~WaRg~gW~~~gl~~~l~~lp~~~~~~~~~~~~~~~~a~~l~~~q~~~dG~W~--~~ld 266 (373)
T 1nc5_A 189 HAWDEAKKMPWANEETGCSPEFWARSIGWYVMSLADMIEELPKKHPNRHVWKNTLQDMIKSICRYQDKETGLWY--QIVD 266 (373)
T ss_dssp SEEETTCCSTTSCTTTCBCSCCBHHHHHHHHHHHHHHGGGSCTTCHHHHHHHHHHHHHHHHHHTTSCTTTSCCB--SBTT
T ss_pred eecCCccccccccccCCCCCCcccchHhHHHHHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHhcCCCCCcee--eecC
Confidence 32211000 0000000111223444433333445555554 34677888888888887642 2211 1132
Q ss_pred Cc-----------hhhHHHHHHHHHHHc-CChHHHHHHHHHHHHhhch
Q psy3913 345 HG-----------VSGNGYAFLLLYRLT-KDEQYLHKAYLFANFMLSD 380 (423)
Q Consensus 345 hG-----------~aG~~~~ll~l~~~t-~~~~~~~~a~~~~~~~~~~ 380 (423)
.+ +|..++.+++..+.- -+++|+..|.+..+.+.++
T Consensus 267 ~~~~~~~~~EsSatA~~ay~l~~g~~~g~l~~~Y~~~a~k~~~~l~~~ 314 (373)
T 1nc5_A 267 KGDRSDNWLESSGSCLYMYAIAKGINKGYLDRAYETTLLKAYQGLIQH 314 (373)
T ss_dssp CTTSTTCCBCHHHHHHHHHHHHHHHHHTSSCGGGHHHHHHHHHHHHHH
T ss_pred CCCCCCCCccccHHHHHHHHHHHHHHCCCCcHHHHHHHHHHHHHHHHh
Confidence 22 577778888876542 1478999999988877654
No 16
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa}
Probab=97.37 E-value=0.013 Score=56.69 Aligned_cols=247 Identities=12% Similarity=-0.002 Sum_probs=132.6
Q ss_pred HHHHHHHHHHhCChhHHHHHHHHHHHHHHHHhhc---ccc---CCC----CccccccchhHHHHHHHHHHHhCcccCcHH
Q psy3913 122 HAVLGVFYNAVGDKERSQCHFDMYTKLATHIKAI---DYV---KFG----GDEFLVGRAGYLAGIIWAERQLGRQIMSLE 191 (423)
Q Consensus 122 ~~l~~~l~~~~~~~~~l~~~l~~~~~~~~~~~~~---~~~---~~~----~~d~l~G~aG~l~~ll~l~~~~~~~~~~~~ 191 (423)
+.+++..++.++++.+++.+.+.+.-+....... .|. ..+ ..-.++..|=.+.+++. +..++++..+ +
T Consensus 58 i~~~a~a~~~~g~~~~l~~A~~~~~fl~~~~~d~~~Gg~~~~~~dG~~~~~~~~lyd~Af~i~al~~-~~~tgd~~~l-~ 135 (402)
T 3gt5_A 58 VFNYAMAYLQFGTAEYLDAVHHGLSYVRDVHRNPATGGYAWTLCDDRVEDDTNHCYGLAFVMLAYSC-GLKVGIKQAR-E 135 (402)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHHHHHHHTTBCTTTSCBCSEEETTEEEECCEEHHHHHHHHHHHHH-HHHTTCTTHH-H
T ss_pred HHHHHHHHHhhCChHHHHHHHHHHHHHHHhCccCCCCcEEEEeeCCCCCcCCcchHHHHHHHHHHHH-HHHhCChhHH-H
Confidence 4555677778899887776655554444432211 110 001 11235666777788888 5567776543 4
Q ss_pred HHHHHHHHHHHcCccccccccCCCCccee-ecCC-c-ccccccchHH-HHHHHhccccccCCCcchHHHHHHHHHHHHHc
Q psy3913 192 DRTAICNALILSGRSYSQANNLRCPLMYH-YYGT-E-YLGACHGLSG-ILQVLLCEKNYVKSNPDIEKDIKETVDFLLKL 267 (423)
Q Consensus 192 ~i~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~-~~G~aHG~~G-I~~~Ll~~~~~~~~~~~~~~~i~~~~~~l~~~ 267 (423)
.++++.+.+.+.-. + .....+++ +... . ...-++.... ++.+++.+++.++ ++.+++.++..++.+...
T Consensus 136 ~A~~l~~~i~~~f~---d---~~~G~~~~~~~~~~~~~~~~~~n~~m~l~eall~L~~~tg-d~~~~~~a~~l~~~~~~~ 208 (402)
T 3gt5_A 136 WMDETWCLLERHFW---D---AEYGLYKDEADAQWNFTRYRGQNANMHMCEAMLAAYEASG-EQRYLERALVLADRITRR 208 (402)
T ss_dssp HHHHHHHHHHHHTE---E---TTTTEECCEECTTCCBCSCEEHHHHHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHTH
T ss_pred HHHHHHHHHHHHhc---C---CcCCCchhhhCCCCCCCCCCCCCHHHHHHHHHHHHHHhhC-CHHHHHHHHHHHHHHHHH
Confidence 56677777765321 0 00011111 1100 0 0001222223 2356888889998 788999999988888763
Q ss_pred c-C-CCCCCCCCCccCCCCCc--cccc-cccccccccCchHH----HHHHHHHHHHhCcHhHHHHHHHHHHHHHHhCCCC
Q psy3913 268 Q-M-PNGNFPADLKELYSPTD--AKSA-ANELVHWCHGAPGV----IYLMAKAYLFWGEEKYLNSCIKCGEVIWEKGLLK 338 (423)
Q Consensus 268 ~-~-~~g~wp~~~~~~~~~~~--~~~~-~~~~~~WChG~~Gi----~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~g~~~ 338 (423)
+ + +.|..+.......++.. +... ....-.+ .=.||- +.+|++++.+++++++.+.|+++.+..++.|.-.
T Consensus 209 f~~~~~g~l~e~~~~dw~~~~~~~~~~~~~~~~~~-~~~pGH~iE~awlLl~~~~~~~~~~~~~~A~~l~~~~~~~gwd~ 287 (402)
T 3gt5_A 209 QAAKADGLVWEHYDMRWEVDWDYNRDNPKHLFRPW-GFQPGHQTEWAKLLLILDRYIEVEWLVPVARSLFDVAVARSWDA 287 (402)
T ss_dssp HHHTTTTSCCSEECTTSCBCTTTTTTSTTCSSSCS-SBCHHHHHHHHHHHHHHHHHCCCTTHHHHHHHHHHHHHHHHBCT
T ss_pred hhCccCCeeEEEECCCCCCccccccCCcccccCcC-CCCCChHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhcccC
Confidence 2 2 23321111000000000 0000 0000000 123565 3457888888999999999999998887765422
Q ss_pred CCCcccCch----------------hhHHHHHHHHHHHcCChHHHHHHHHHHHHhh
Q psy3913 339 KGPGICHGV----------------SGNGYAFLLLYRLTKDEQYLHKAYLFANFML 378 (423)
Q Consensus 339 ~~~~LChG~----------------aG~~~~ll~l~~~t~~~~~~~~a~~~~~~~~ 378 (423)
..-|++... +=.+.+++.+|+.|+|++|++.+.++.+++.
T Consensus 288 ~~Gg~~~~~d~~g~~~~~~k~~W~qaEal~a~l~ly~~tgd~~yl~~a~~~~~~~~ 343 (402)
T 3gt5_A 288 VRGGLCYGFAPDGTICDDDKYFWVQAESLAAAALLATRSGDERYWQWYDRLWAYAW 343 (402)
T ss_dssp TTCSBCSEECTTSCEEECCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEcCCCCeeeCCcceeHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 122333211 1124457889999999999999999888763
No 17
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A*
Probab=97.09 E-value=0.028 Score=54.72 Aligned_cols=237 Identities=11% Similarity=0.015 Sum_probs=129.3
Q ss_pred HHHHHHHHHHhCChhHHHHHHHHHHHHHHHHhh-c--cccCC-------CCccccccchhHHHHHHHHHHHhCcccCcHH
Q psy3913 122 HAVLGVFYNAVGDKERSQCHFDMYTKLATHIKA-I--DYVKF-------GGDEFLVGRAGYLAGIIWAERQLGRQIMSLE 191 (423)
Q Consensus 122 ~~l~~~l~~~~~~~~~l~~~l~~~~~~~~~~~~-~--~~~~~-------~~~d~l~G~aG~l~~ll~l~~~~~~~~~~~~ 191 (423)
+..++..+. +|++++++.+.+.+..+...+.. . .+... .....++..|=.+.+++. ++.++++.. .+
T Consensus 57 i~~~a~a~~-~g~~~~l~~A~~~~~fl~~~~~D~~~GG~~~s~d~dg~~~~~k~lyd~Af~i~al~~-~~~tg~~~~-l~ 133 (421)
T 2zbl_A 57 LHVYSVAAS-MGRPGAYDLVDHGIKAMNGALRDKKYGGWYACVNDQGVVDASKQGYQHFFALLGAAS-AVTTGHPEA-RK 133 (421)
T ss_dssp HHHHHHHHH-TTCTTHHHHHHHHHHHHTTTTBCTTTSSBCSEEETTEEEECCEEHHHHHHHHHHHHH-HHTTTCTTH-HH
T ss_pred HHHHHHHHH-cCChhHHHHHHHHHHHHHHhccCcCCCeEEEEeCCCCCcCCchhHHHHHHHHHHHHH-HHHhCCccH-HH
Confidence 344455565 88888777666555544443221 1 11100 012345556667777777 777777644 34
Q ss_pred HHHHHHHHHHHcCccccccccCCCCccee-----ecC-CcccccccchHHHHHHHhccccccCCCcchHHHHHHHHHHHH
Q psy3913 192 DRTAICNALILSGRSYSQANNLRCPLMYH-----YYG-TEYLGACHGLSGILQVLLCEKNYVKSNPDIEKDIKETVDFLL 265 (423)
Q Consensus 192 ~i~~i~~~~~~~~~~~~~~~~~~~~~~~~-----~~~-~~~~G~aHG~~GI~~~Ll~~~~~~~~~~~~~~~i~~~~~~l~ 265 (423)
.++++.+.+.+.-. . .....++. +.+ ....++ -+.+=++.+++.++..++ ++.+.+.++++++.+.
T Consensus 134 ~a~~~~~~l~~~~~---d---~~~Ggf~~~~d~d~~~~~~~~~~-n~~m~~~~al~~l~~~tg-d~~~~~~A~~~~~~~~ 205 (421)
T 2zbl_A 134 LLDYTIEVIEKYFW---S---EEEQMCLESWDEAFSQTEDYRGG-NANMHAVEAFLIVYDVTH-DKKWLDRALRIASVII 205 (421)
T ss_dssp HHHHHHHHHHHHTE---E---TTTTEECCEECTTSCSBCSCEEH-HHHHHHHHHHHHHHHTTC-CTHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhc---c---CCCCCeeeeecCCCCcccccCCC-cHHHHHHHHHHHHHHhhC-CHHHHHHHHHHHHHHH
Confidence 55666666654211 0 00011111 000 011111 122224677888888888 6888888888888876
Q ss_pred HccC--CCCCCCCCCccCCCCCcccccccccccc----ccC-------chHH----HHHHHHHHHHh---Cc--H-hHHH
Q psy3913 266 KLQM--PNGNFPADLKELYSPTDAKSAANELVHW----CHG-------APGV----IYLMAKAYLFW---GE--E-KYLN 322 (423)
Q Consensus 266 ~~~~--~~g~wp~~~~~~~~~~~~~~~~~~~~~W----ChG-------~~Gi----~~~l~~~~~~~---~~--~-~~~~ 322 (423)
.... +.+..+....... ...... +.+ .+|. +.+|+++++++ ++ + ++.+
T Consensus 206 ~~~~~~~~~~l~~~f~~~~---------~~~~~~~~dd~~~r~~~~~~~pgh~iE~~wlLl~~~~~~~~~~~~~~~~~l~ 276 (421)
T 2zbl_A 206 HDVARNGDYRVNEHFDSQW---------NPIRDYNKDNPAHRFRAYGGTPGAWIEWGRLMLHLHAALEARFETPPAWLLE 276 (421)
T ss_dssp CCCCGGGTTCCCCEECTTS---------CBCTTTTTTSTTCSSSCSSBCHHHHHHHHHHHHHHHHHHHHTTCCCCTHHHH
T ss_pred HHhccCCCCchhhhcCCcc---------ccchhccCCCcccccccCCCCCChHHHHHHHHHHHHHHcccccccchHHHHH
Confidence 5322 2222221111000 000011 111 3664 45678888888 45 5 7999
Q ss_pred HHHHHHHHHHHhCCCCC-CCcccC-----ch-----------hhHHHHHHHHHHHcCChHHHHHHHHHHHHhh
Q psy3913 323 SCIKCGEVIWEKGLLKK-GPGICH-----GV-----------SGNGYAFLLLYRLTKDEQYLHKAYLFANFML 378 (423)
Q Consensus 323 ~a~~~~~~~~~~g~~~~-~~~LCh-----G~-----------aG~~~~ll~l~~~t~~~~~~~~a~~~~~~~~ 378 (423)
.|.++.+.+++.+.-.. ..|++. |. +=.+..++.+|+.|++++|++.|.++.+++.
T Consensus 277 ~A~~l~~~~~~~g~d~~~~GG~~~~~~~~g~~~~~~k~~w~~aea~~all~l~~~tgd~~yl~~a~~~~~~~~ 349 (421)
T 2zbl_A 277 DAKGLFHATIRDAWAPDGADGFVYSVDWDGKPIVRERVRWPIVEAMGTAYALYTLTDDSQYEEWYQKWWDYCI 349 (421)
T ss_dssp HHHHHHHHHHHHHBSCSSSSSBCSCBCTTSCBSCCCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCCcEEEeecCCCCccCCCcccHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 99999888876554211 123332 32 2236678999999999999999999888764
No 18
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A*
Probab=96.99 E-value=0.0035 Score=60.19 Aligned_cols=205 Identities=12% Similarity=0.054 Sum_probs=118.1
Q ss_pred HHHHHHHHHHhCcccCcHHHHHHHHHHHHHcCccccccccCCCCcceeecCCcccccccchHHHHHHHhccccccCCCcc
Q psy3913 173 LAGIIWAERQLGRQIMSLEDRTAICNALILSGRSYSQANNLRCPLMYHYYGTEYLGACHGLSGILQVLLCEKNYVKSNPD 252 (423)
Q Consensus 173 l~~ll~l~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~aHG~~GI~~~Ll~~~~~~~~~~~ 252 (423)
+.++..+++.++++.+. +.+++.++.++.... .+.|.. +. .-+=. ++.+++.+++.++ ++.
T Consensus 47 ~~gl~~~y~~tgd~~y~-~~a~~~~~~~~~~~g----------~l~~~~-~~----lDd~~--~g~~ll~lY~~Tg-d~~ 107 (373)
T 1nc5_A 47 LCGVLRLWEATGEKRYF-EYAKAYADLLIDDNG----------NLLFRR-DE----LDAIQ--AGLILFPLYEQTK-DER 107 (373)
T ss_dssp HHHHHHHHHHHCCHHHH-HHHHHHHHHHBCTTC----------CBCCCT-TC----GGGTG--GGGGHHHHHHHHC-CHH
T ss_pred HHHHHHHHHHhCCHHHH-HHHHHHHHHHhCCCC----------cccCCC-CC----cchHH--HHHHHHHHHHHhC-CHH
Confidence 45677888889886553 345555555542110 011110 00 11111 2346777888888 788
Q ss_pred hHHHHHHHHHHHHHccC-CC-CCCCCCCccCCCCCccccccccccccccCchHHHHHHHHHHHHhCcHhHHHHHHHHHHH
Q psy3913 253 IEKDIKETVDFLLKLQM-PN-GNFPADLKELYSPTDAKSAANELVHWCHGAPGVIYLMAKAYLFWGEEKYLNSCIKCGEV 330 (423)
Q Consensus 253 ~~~~i~~~~~~l~~~~~-~~-g~wp~~~~~~~~~~~~~~~~~~~~~WChG~~Gi~~~l~~~~~~~~~~~~~~~a~~~~~~ 330 (423)
+++.+....+++..... ++ +.|-.. ..+ ..-||-|..-.+.+|++++++++|++|.+.|.+..+.
T Consensus 108 yl~~a~~la~~l~~~~r~~~G~fw~~~------------~~~-~~~w~D~l~m~~p~L~~l~~~tgd~~y~d~A~~~~~~ 174 (373)
T 1nc5_A 108 YVKAAKRLRSLYGTLNRTSEGGFWHKD------------GYP-YQMWLDGLYMGGPFALKYANLKQETELFDQVVLQESL 174 (373)
T ss_dssp HHHHHHHHHGGGGTSCBCTTSCBCSCT------------TST-TEEETHHHHHHHHHHHHHHHHHTCTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCCCCCCeeccC------------CCC-CeEEeCcHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
Confidence 98988888888865432 33 345321 111 1358999877777899999999999999999888777
Q ss_pred HHHhCCCCCCCccc-C---------------ch------hhHHHH---HHHHHHH-----cCChHHHHHHHHHHHHhhch
Q psy3913 331 IWEKGLLKKGPGIC-H---------------GV------SGNGYA---FLLLYRL-----TKDEQYLHKAYLFANFMLSD 380 (423)
Q Consensus 331 ~~~~g~~~~~~~LC-h---------------G~------aG~~~~---ll~l~~~-----t~~~~~~~~a~~~~~~~~~~ 380 (423)
..+.-. ....|++ | |. -|++.+ +.++++. +++++|++.++++++.++..
T Consensus 175 ~~~~l~-D~~tGl~~h~~~~~~~~~w~d~~tg~~~~~WaRg~gW~~~gl~~~l~~lp~~~~~~~~~~~~~~~~a~~l~~~ 253 (373)
T 1nc5_A 175 MRKHTK-DAKTGLFYHAWDEAKKMPWANEETGCSPEFWARSIGWYVMSLADMIEELPKKHPNRHVWKNTLQDMIKSICRY 253 (373)
T ss_dssp HHHHHB-CTTTSCBCSEEETTCCSTTSCTTTCBCSCCBHHHHHHHHHHHHHHGGGSCTTCHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHhc-CCCCCCEEeecCCccccccccccCCCCCCcccchHhHHHHHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHh
Confidence 654311 0112222 3 22 255544 4555555 34567888999988887632
Q ss_pred h------hhhcCCCCCCCCcc--ccchHHHHHHHHHcc
Q psy3913 381 D------FKRNARMPDAPFSL--YEGLAGTACFFIDLM 410 (423)
Q Consensus 381 ~------~~~~~~~~~~~~gl--~~G~aGi~~~Ll~~~ 410 (423)
. |..-...+..+-+. -.|.|.+++.|++..
T Consensus 254 q~~~dG~W~~~ld~~~~~~~~~EsSatA~~ay~l~~g~ 291 (373)
T 1nc5_A 254 QDKETGLWYQIVDKGDRSDNWLESSGSCLYMYAIAKGI 291 (373)
T ss_dssp SCTTTSCCBSBTTCTTSTTCCBCHHHHHHHHHHHHHHH
T ss_pred cCCCCCceeeecCCCCCCCCCccccHHHHHHHHHHHHH
Confidence 1 21111111111122 236788888888753
No 19
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}
Probab=96.92 E-value=0.0028 Score=61.10 Aligned_cols=139 Identities=14% Similarity=0.023 Sum_probs=88.8
Q ss_pred HHHHHHHhccccc-cCCCcchHHHHHHHHHHHHHc-cCCCCCCCCCCccCCCCCccccccccccccccCchHHHHHHHHH
Q psy3913 234 SGILQVLLCEKNY-VKSNPDIEKDIKETVDFLLKL-QMPNGNFPADLKELYSPTDAKSAANELVHWCHGAPGVIYLMAKA 311 (423)
Q Consensus 234 ~GI~~~Ll~~~~~-~~~~~~~~~~i~~~~~~l~~~-~~~~g~wp~~~~~~~~~~~~~~~~~~~~~WChG~~Gi~~~l~~~ 311 (423)
+=++.++..++.. ++ ++.+++.++++++++++. .+++|.|..+......+ ... ..-|.+.+=.+..++.+
T Consensus 56 ar~i~~~a~a~~~~~~-~~~~~~~A~~~~~~l~~~~~~~~Gg~~~~~d~dg~~-----~~~--~~~~~~~af~i~al~~~ 127 (388)
T 2gz6_A 56 NRQVWTFSMLCNQLEK-RENWLKIARNGAKFLAQHGRDDEGNWYFALTRGGEP-----LVQ--PYNIFSDCFAAMAFSQY 127 (388)
T ss_dssp HHHHHHHHHHHHHTCC-CHHHHHHHHHHHHHHHHHSBCTTSCBCSEECTTSCB-----CCC--CCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcC-CHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCc-----ccC--CcchHHHHHHHHHHHHH
Confidence 3455666677777 67 789999999999999995 45566665432111000 010 11233333355567888
Q ss_pred HHHhCcHhHHHHHHHHHHHHHHh-----CCCC---CCCcccCchhhH---HHHHHHHHHHcCChHHHHHHHHHHHHhhch
Q psy3913 312 YLFWGEEKYLNSCIKCGEVIWEK-----GLLK---KGPGICHGVSGN---GYAFLLLYRLTKDEQYLHKAYLFANFMLSD 380 (423)
Q Consensus 312 ~~~~~~~~~~~~a~~~~~~~~~~-----g~~~---~~~~LChG~aG~---~~~ll~l~~~t~~~~~~~~a~~~~~~~~~~ 380 (423)
+++++++++++.|+++.+.+.+. |+.. ......-|.+++ +.+++.++++|++++|+++|.++++.+...
T Consensus 128 y~~tg~~~~l~~A~~~~~~i~~~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~all~l~~~t~d~~~~~~A~~~~~~~~~~ 207 (388)
T 2gz6_A 128 ALASGEEWAKDVAMQAYNNVLRRKDNPKGKYTKTYPGTRPMKALAVPMILANLTLEMEWLLPQETLENVLAATVQEVMGD 207 (388)
T ss_dssp HHHHCCHHHHHHHHHHHHHHHTC--------------CCCCEETHHHHHHHHHHHHTGGGSCHHHHHHHHHHHHHHHHHT
T ss_pred HHHhCCHHHHHHHHHHHHHHHHHhcCCCcccCcccCCCCCCCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999998887532 2210 001112233433 345688999999999999999999887643
No 20
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3
Probab=96.68 E-value=0.068 Score=51.54 Aligned_cols=233 Identities=12% Similarity=0.045 Sum_probs=124.4
Q ss_pred HHHHHHHHh---CChhHHHHHHHHHHHHHHHHhhc----cccC-----CC---CccccccchhHHHHHHHHHHHhCcccC
Q psy3913 124 VLGVFYNAV---GDKERSQCHFDMYTKLATHIKAI----DYVK-----FG---GDEFLVGRAGYLAGIIWAERQLGRQIM 188 (423)
Q Consensus 124 l~~~l~~~~---~~~~~l~~~l~~~~~~~~~~~~~----~~~~-----~~---~~d~l~G~aG~l~~ll~l~~~~~~~~~ 188 (423)
.++..++.+ +++++++.+.+.+..+....... .+.. .. ....+++.+=.+.+++.+++.++++..
T Consensus 64 ~~a~a~~~~~~~~~~~~l~~A~~~~~fl~~~~~d~~gg~g~~~s~d~dg~~~~~~~~lyd~af~~~a~~~~~~atgd~~~ 143 (402)
T 1fp3_A 64 MYCRLYRKLERFHRPELLDAAKAGGEFLLRHARVAPPEKKCAFVLTRDGRPVKVQRSIFSECFYTMAMNELWRVTAEARY 143 (402)
T ss_dssp HHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHTBSSTTSCCBCSEECTTSCEEECCSSSHHHHHHHHHHHHHHHHHCCHHH
T ss_pred HHHHHHHHhcccCCHHHHHHHHHHHHHHHHhccCcCCCCceEEEECCCCCccccccchHHHHHHHHHHHHHHHHhCCHHH
Confidence 444556665 88877766666665555543211 1211 00 122355677888899999999987644
Q ss_pred cHHHHHHHHHHHHHcC----c-cccccccCCCCcceeecCCcccccccchHHHH-HHHhc---cccccCCCcchHHHHHH
Q psy3913 189 SLEDRTAICNALILSG----R-SYSQANNLRCPLMYHYYGTEYLGACHGLSGIL-QVLLC---EKNYVKSNPDIEKDIKE 259 (423)
Q Consensus 189 ~~~~i~~i~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~G~aHG~~GI~-~~Ll~---~~~~~~~~~~~~~~i~~ 259 (423)
. +.+.++++.+++.- . .+.. ..+. | ...-++ +...++ -+++. +...+. + .+.+.++.
T Consensus 144 ~-~~A~~l~~~~~~~~~d~~~G~f~~----~~~~---~--~~~~~~--~~~m~~~~~~l~l~~l~~~~~-~-~~~~~a~~ 209 (402)
T 1fp3_A 144 Q-SEAVDMMDQIVHWVREDPSGLGRP----QLPG---A--VASESM--AVPMMLLCLVEQLGEEDEELA-G-RYAQLGHW 209 (402)
T ss_dssp H-HHHHHHHHHHHHHHHTCGGGGCCC----CCTT---S--CCEEET--HHHHHHHHHHHHHHTTCHHHH-H-HTHHHHHH
T ss_pred H-HHHHHHHHHHHHHhccCCCcccCc----cccC---c--cCCCCc--chHHHHHHHHHHHHHHHHhcC-c-HHHHHHHH
Confidence 3 34455555554321 0 1100 0000 0 011122 111122 22333 444443 2 36667777
Q ss_pred HHHHHHHccCC-CCCCCCCCccCCCCCccccccccccccc--cCchH----HHHHHHHHHHHhCcHhHHHHHHHHHHHH-
Q psy3913 260 TVDFLLKLQMP-NGNFPADLKELYSPTDAKSAANELVHWC--HGAPG----VIYLMAKAYLFWGEEKYLNSCIKCGEVI- 331 (423)
Q Consensus 260 ~~~~l~~~~~~-~g~wp~~~~~~~~~~~~~~~~~~~~~WC--hG~~G----i~~~l~~~~~~~~~~~~~~~a~~~~~~~- 331 (423)
.++.+.....+ .+..+...... ..+ ...+. +=.|| .+.+|++++.+++++++.+.|+++.+.+
T Consensus 210 ~~~~~~~~~~~~~~~~~e~~d~d--------w~~-~~~~~g~~~~pgh~ie~~wlL~~a~~~~~~~~~l~~A~~~~~~~~ 280 (402)
T 1fp3_A 210 CARRILQHVQRDGQAVLENVSED--------GEE-LSGCLGRHQNPGHALEAGWFLLRHSSRSGDAKLRAHVIDTFLLLP 280 (402)
T ss_dssp HHHHHHTTEETTTTEECSEEETT--------SCB-CCHHHHHEECHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTHHH
T ss_pred HHHHHHHHhCcCCCeEEEEECCC--------CCc-cCCCCCCCCCCCcHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHH
Confidence 77776654211 22111000000 000 00000 01355 2336889999999999999999999988
Q ss_pred HHhCCCCCCCcccCc-----h--------hh-------HHHHHHHHHHHcCChHHHHHHHHHHHHhhc
Q psy3913 332 WEKGLLKKGPGICHG-----V--------SG-------NGYAFLLLYRLTKDEQYLHKAYLFANFMLS 379 (423)
Q Consensus 332 ~~~g~~~~~~~LChG-----~--------aG-------~~~~ll~l~~~t~~~~~~~~a~~~~~~~~~ 379 (423)
++.+.-....+++|- . +- .+.+++.+|+.|+|++|++.|.++.+++..
T Consensus 281 ~~~~~d~~~gg~~~~~~~~g~~~~~l~d~~~~~W~qaea~~a~l~ly~~tgd~~yl~~a~~~~~~~~~ 348 (402)
T 1fp3_A 281 FRSGWDADHGGLFYFQDADGLCPTQLEWAMKLWWPHSEAMIAFLMGYSESGDPALLRLFYQVAEYTFR 348 (402)
T ss_dssp HHHHBCTTTCSBCSCEETTSCCCSSTTTTCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_pred HHHhccCCCCCEEEeecCCCCccccCcCCCcCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 876652111345543 2 11 177899999999999999999999888753
No 21
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=96.65 E-value=0.18 Score=49.13 Aligned_cols=245 Identities=9% Similarity=-0.059 Sum_probs=141.2
Q ss_pred HH-HHHHHHHHHHhCChhHHHHHHHHHHHHHHHH-------h-hcccc----CCCCccccccchhHHHHHHHHHHHhCcc
Q psy3913 120 GI-HAVLGVFYNAVGDKERSQCHFDMYTKLATHI-------K-AIDYV----KFGGDEFLVGRAGYLAGIIWAERQLGRQ 186 (423)
Q Consensus 120 Gi-~~l~~~l~~~~~~~~~l~~~l~~~~~~~~~~-------~-~~~~~----~~~~~d~l~G~aG~l~~ll~l~~~~~~~ 186 (423)
|+ +..+..+++.+|++++++.+.+.++-+.+.. . ..... .....+.+.=.+..+++++.+++.++++
T Consensus 85 Gv~l~gl~~ay~~Tgd~kY~~ya~~~~dfi~~~~p~~~~~~~~~G~l~~~~r~~~~~~~LDD~g~~~~~Li~lY~~T~d~ 164 (445)
T 3k11_A 85 GVTYSALIAAAETTGDKRYTDYVQNRFRFLAEVAPHFKRVYEEKGKTDSQLLQILTPHALDDAGAVCTAMIKLRLKDESL 164 (445)
T ss_dssp HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHSCCSGGGTHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHhccchhhhhhhccCCeecccccccCCCcchhHHHHHHHHHHHHHhcCCH
Confidence 55 4555678899999987776666554332210 0 00000 0001122222356678888999988887
Q ss_pred cCcHHHHHHHHHHHHHcCccccccccCCCCcceeecCCcccccccchHHHHHHHhccccccCCCcc--hHHHHHHHHHHH
Q psy3913 187 IMSLEDRTAICNALILSGRSYSQANNLRCPLMYHYYGTEYLGACHGLSGILQVLLCEKNYVKSNPD--IEKDIKETVDFL 264 (423)
Q Consensus 187 ~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~aHG~~GI~~~Ll~~~~~~~~~~~--~~~~i~~~~~~l 264 (423)
.+ .+.+.+.++.+++.... .....+|......+--|+-|..=...+|+.+.+.++ ++. +.+.+..-+...
T Consensus 165 ~y-l~~a~~~ad~L~~~~pR------t~~Ggf~h~~~~~~q~WiD~lyM~~pfla~~~~~tg-d~~~~y~d~A~~q~~~~ 236 (445)
T 3k11_A 165 PV-DGLIQNYFDFIINKEYR------LADGTFARNRPQRNTLWLDDMFMGIPAVAQMSRYDK-EAKNKYLAEAVKQFLQF 236 (445)
T ss_dssp CC-HHHHHHHHHHHHHTSCB------CTTCCBCBCSSSTTEEETHHHHHHHHHHHHHHHHCG-GGHHHHHHHHHHHHHHH
T ss_pred HH-HHHHHHHHHHHHHcCCC------CCCCceeecCCCCCceEecchhhHHHHHHHHHHHHC-CcchHHHHHHHHHHHHH
Confidence 66 45778888988874311 011112211011233577777666778888888888 566 666554433333
Q ss_pred HH-ccC-CCCCCCCCCccCCCCCccccccccccccccCchHHHHHHHHHHHHh-----CcHhHHHHHHHHHHHHHHh---
Q psy3913 265 LK-LQM-PNGNFPADLKELYSPTDAKSAANELVHWCHGAPGVIYLMAKAYLFW-----GEEKYLNSCIKCGEVIWEK--- 334 (423)
Q Consensus 265 ~~-~~~-~~g~wp~~~~~~~~~~~~~~~~~~~~~WChG~~Gi~~~l~~~~~~~-----~~~~~~~~a~~~~~~~~~~--- 334 (423)
.+ +++ +.|.|-+..... ........|+-|..=.+..+.+.+..+ +++++.+..++.++.+.+.
T Consensus 237 ~~~l~D~~tGL~~Hg~~~~-------~~~~~~~~WaRGnGW~~~gl~~~l~~lp~~~~~r~~l~~~~~~~a~~l~~~Q~~ 309 (445)
T 3k11_A 237 ADRMFIPEKGLYRHGWVES-------STDHPAFCWARANGWALLTACELLDVLPEDYPQRPKVMDYFRAHVRGVTALQSG 309 (445)
T ss_dssp HHHHEETTTTEECSEEETT-------CSSCCCCCBHHHHHHHHHHHHHHHHHSCTTCTTHHHHHHHHHHHHHHHHTTCCT
T ss_pred HHhcccCCCCCEeeeecCC-------CCCCCcceecccchHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHHhCCC
Confidence 33 454 567765432210 011223468887777777777777653 4566777777777777542
Q ss_pred -CCC----CC--CCcccCchhhHHHHHHHHHHHc--CChHHHHHHHHHHHHhhc
Q psy3913 335 -GLL----KK--GPGICHGVSGNGYAFLLLYRLT--KDEQYLHKAYLFANFMLS 379 (423)
Q Consensus 335 -g~~----~~--~~~LChG~aG~~~~ll~l~~~t--~~~~~~~~a~~~~~~~~~ 379 (423)
|+. .. ++-=--|+|..++.+++..+.- ..++|...|.+..+.+..
T Consensus 310 ~G~W~~vld~~~~y~EsSaTAmfaygllkgvr~G~Ld~~~Y~~~A~ka~~~L~~ 363 (445)
T 3k11_A 310 EGFWHQLLDCNDSYLETSATAIYVYCLAHAINKGWIDAIAYGPVAQLGWHAVAG 363 (445)
T ss_dssp TSCEESBTTCTTSCEEHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHT
T ss_pred CCchhhccCCCCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence 322 11 1112336788888899988753 224699999988887754
No 22
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa}
Probab=96.50 E-value=0.011 Score=57.28 Aligned_cols=134 Identities=14% Similarity=0.171 Sum_probs=87.4
Q ss_pred HHHHHhccccccCCCcchHHHHHHHHHHHHHc-cCCC-CCCCCCCccCCCCCccccccccccccccCchHHHHHHHHHHH
Q psy3913 236 ILQVLLCEKNYVKSNPDIEKDIKETVDFLLKL-QMPN-GNFPADLKELYSPTDAKSAANELVHWCHGAPGVIYLMAKAYL 313 (423)
Q Consensus 236 I~~~Ll~~~~~~~~~~~~~~~i~~~~~~l~~~-~~~~-g~wp~~~~~~~~~~~~~~~~~~~~~WChG~~Gi~~~l~~~~~ 313 (423)
++.++..++..++ ++.+++.++++++++.+. .+++ |.|..+..+. ........|..-+=++.+++. +.
T Consensus 57 ~i~~~a~a~~~~g-~~~~l~~A~~~~~fl~~~~~d~~~Gg~~~~~~dG--------~~~~~~~~lyd~Af~i~al~~-~~ 126 (402)
T 3gt5_A 57 FVFNYAMAYLQFG-TAEYLDAVHHGLSYVRDVHRNPATGGYAWTLCDD--------RVEDDTNHCYGLAFVMLAYSC-GL 126 (402)
T ss_dssp HHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHTTBCTTTSCBCSEEETT--------EEEECCEEHHHHHHHHHHHHH-HH
T ss_pred HHHHHHHHHHhhC-ChHHHHHHHHHHHHHHHhCccCCCCcEEEEeeCC--------CCCcCCcchHHHHHHHHHHHH-HH
Confidence 4566666777777 789999999999999984 3444 6665443210 010112336655556666777 55
Q ss_pred HhCcHhHHHHHHHHHHHHHHh------CCCC--CCCc--c--cCchhh---HHHHHHHHHHHcCChHHHHHHHHHHHHhh
Q psy3913 314 FWGEEKYLNSCIKCGEVIWEK------GLLK--KGPG--I--CHGVSG---NGYAFLLLYRLTKDEQYLHKAYLFANFML 378 (423)
Q Consensus 314 ~~~~~~~~~~a~~~~~~~~~~------g~~~--~~~~--L--ChG~aG---~~~~ll~l~~~t~~~~~~~~a~~~~~~~~ 378 (423)
.++++++++.|+++.+.+.+. |... ..+. + .-+... .+.++++++++|++++|+++|.++++.+.
T Consensus 127 ~tgd~~~l~~A~~l~~~i~~~f~d~~~G~~~~~~~~~~~~~~~~~~n~~m~l~eall~L~~~tgd~~~~~~a~~l~~~~~ 206 (402)
T 3gt5_A 127 KVGIKQAREWMDETWCLLERHFWDAEYGLYKDEADAQWNFTRYRGQNANMHMCEAMLAAYEASGEQRYLERALVLADRIT 206 (402)
T ss_dssp HTTCTTHHHHHHHHHHHHHHHTEETTTTEECCEECTTCCBCSCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_pred HhCChhHHHHHHHHHHHHHHHhcCCcCCCchhhhCCCCCCCCCCCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHH
Confidence 689999999999999888643 2110 0110 1 112223 34568999999999999999999988775
Q ss_pred c
Q psy3913 379 S 379 (423)
Q Consensus 379 ~ 379 (423)
.
T Consensus 207 ~ 207 (402)
T 3gt5_A 207 R 207 (402)
T ss_dssp T
T ss_pred H
Confidence 4
No 23
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus}
Probab=95.50 E-value=0.063 Score=53.98 Aligned_cols=142 Identities=18% Similarity=0.199 Sum_probs=81.1
Q ss_pred HHHH-HHHhccccccCC--------CcchHHHHHHHHHHHHHccCCCCC--------CCCCCccC----CCCCccccccc
Q psy3913 234 SGIL-QVLLCEKNYVKS--------NPDIEKDIKETVDFLLKLQMPNGN--------FPADLKEL----YSPTDAKSAAN 292 (423)
Q Consensus 234 ~GI~-~~Ll~~~~~~~~--------~~~~~~~i~~~~~~l~~~~~~~g~--------wp~~~~~~----~~~~~~~~~~~ 292 (423)
.+++ +.|+.+++.... -+.+++.++=.++|+++.+.++|. |+...... ....+......
T Consensus 164 ~~~~~w~ll~~~~~~~~~~~~~~~~~~~lldE~rWg~D~llkm~~~~g~~y~qVgd~W~~d~~~R~~~~~~~~~~~~~~~ 243 (586)
T 3h7l_A 164 TPMVVWNILKGLSLLEGSEDIAAFTRTRLIEEALFGADFLVRMQNEKGFFYMTVFDKWSKDTAQREICAYETQLGHKFDD 243 (586)
T ss_dssp HHHHHHHHHHHHHHSTTSSSSCHHHHHHHHHHHHHHHHHHHHTBCTTSCBBCEEECTTCCCGGGCEEEEEETTTTEEESC
T ss_pred hhHHHHHHHHHHHHhhhhccCcccchHHHHHHHHHHHHHHHhcccCCCeEEEEecCCCCCCCCccccccccCCCCCCCcc
Confidence 4555 778777665431 135677788889999998775443 43110000 00000000001
Q ss_pred cccccccCchHHHHHHHHHHHHh-----CcHhHHHHHHHHHHHHHHh-CCCCCCCcccCchhhH------HHHHHHHHHH
Q psy3913 293 ELVHWCHGAPGVIYLMAKAYLFW-----GEEKYLNSCIKCGEVIWEK-GLLKKGPGICHGVSGN------GYAFLLLYRL 360 (423)
Q Consensus 293 ~~~~WChG~~Gi~~~l~~~~~~~-----~~~~~~~~a~~~~~~~~~~-g~~~~~~~LChG~aG~------~~~ll~l~~~ 360 (423)
..+...-|+.=++.+|+.+++++ ..+++++.|+++.+.+.+. +... ..|..|. ..+.+.||+.
T Consensus 244 y~~~~~~~agl~aAALA~Asrvf~d~~~~a~~~L~aA~~a~~fa~~~~~~y~-----~~g~~~~~De~~~~WAA~eLy~A 318 (586)
T 3h7l_A 244 YQAGFRQGGGVAIAALAAASRLGVHGEYDQQKYRNAAENGYWHLKEHNTQYL-----NDGEENIIDEYCALLASVELFKA 318 (586)
T ss_dssp CBCCGGGTHHHHHHHHHHHTTSSSCSSSCHHHHHHHHHHHHHHHHHHHHHHS-----TTSCCCHHHHHHHHHHHHHHHHH
T ss_pred eecCCCCcHHHHHHHHHHHhcccCCCCcChHHHHHHHHHHHHHHHhcCcccc-----CCCCccchhHHHHHHHHHHHHHH
Confidence 11223334433556677777773 4456777777777666432 1111 1255665 4667889999
Q ss_pred cCChHHHHHHHHHHHHhhch
Q psy3913 361 TKDEQYLHKAYLFANFMLSD 380 (423)
Q Consensus 361 t~~~~~~~~a~~~~~~~~~~ 380 (423)
|++++|++.|...++.+..+
T Consensus 319 Tgd~~YL~~a~~~a~~l~~~ 338 (586)
T 3h7l_A 319 TKETRYLEESRLWAQRLVAR 338 (586)
T ss_dssp HCCHHHHHHHHHHHHHHHTT
T ss_pred hCCHHHHHHHHHHHHHHHHh
Confidence 99999999999988877643
No 24
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3
Probab=95.15 E-value=1.4 Score=42.08 Aligned_cols=248 Identities=9% Similarity=-0.004 Sum_probs=123.3
Q ss_pred HHHHHHHhhCCCC---CCCcHHHHHHHHHHHHHHHHHhhhhccC-CCCCCccc-ccC-----------chHHHHHHHHHH
Q psy3913 66 GYMLWYVAQSPIY---ASEAPTYYLKARRYLDNLKNVLATKKHR-CITDYSAF-LCG-----------DAGIHAVLGVFY 129 (423)
Q Consensus 66 ~~~l~~l~~~~~~---~d~~~~~~~~a~~~i~~~~~~~~~~~~~-~~~~~~~~-~~G-----------~aGi~~l~~~l~ 129 (423)
+++++.+++. + +++ +|++.|...++-+...+.....+ . -..++ -.| .+=++..++.++
T Consensus 62 l~~~a~a~~~--~~~~~~~--~~l~~A~~~~~fl~~~~~d~~gg~g--~~~s~d~dg~~~~~~~~lyd~af~~~a~~~~~ 135 (402)
T 1fp3_A 62 VWMYCRLYRK--LERFHRP--ELLDAAKAGGEFLLRHARVAPPEKK--CAFVLTRDGRPVKVQRSIFSECFYTMAMNELW 135 (402)
T ss_dssp HHHHHHHHHH--CGGGCCH--HHHHHHHHHHHHHHHHTBSSTTSCC--BCSEECTTSCEEECCSSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH--hcccCCH--HHHHHHHHHHHHHHHhccCcCCCCc--eEEEECCCCCccccccchHHHHHHHHHHHHHH
Confidence 5566666776 5 554 89999988888777764210000 0 00111 112 112233446678
Q ss_pred HHhCChhHHHHHHHHHHHHHHHHh-h-ccccCCC--Cccccccchh---HHHHHHH---HHHHhCcccCcHHHHHHHHHH
Q psy3913 130 NAVGDKERSQCHFDMYTKLATHIK-A-IDYVKFG--GDEFLVGRAG---YLAGIIW---AERQLGRQIMSLEDRTAICNA 199 (423)
Q Consensus 130 ~~~~~~~~l~~~l~~~~~~~~~~~-~-~~~~~~~--~~d~l~G~aG---~l~~ll~---l~~~~~~~~~~~~~i~~i~~~ 199 (423)
+.++++.+++.+.+.+..+.+... . ....... ......|.++ .+-+++. ++..+++ .+ .+.++++++.
T Consensus 136 ~atgd~~~~~~A~~l~~~~~~~~~d~~~G~f~~~~~~~~~~~~~~~~m~~~~~~l~l~~l~~~~~~-~~-~~~a~~~~~~ 213 (402)
T 1fp3_A 136 RVTAEARYQSEAVDMMDQIVHWVREDPSGLGRPQLPGAVASESMAVPMMLLCLVEQLGEEDEELAG-RY-AQLGHWCARR 213 (402)
T ss_dssp HHHCCHHHHHHHHHHHHHHHHHHHTCGGGGCCCCCTTSCCEEETHHHHHHHHHHHHHHTTCHHHHH-HT-HHHHHHHHHH
T ss_pred HHhCCHHHHHHHHHHHHHHHHHhccCCCcccCccccCccCCCCcchHHHHHHHHHHHHHHHHhcCc-HH-HHHHHHHHHH
Confidence 889998888877777665555432 1 1111111 1111223332 2233443 2233433 23 3455555555
Q ss_pred HHHcCccccccccCCCCccee-----ecCC-c----ccccccchHHHHHHHhccccccCCCcchHHHHHHHHHHH-HHc-
Q psy3913 200 LILSGRSYSQANNLRCPLMYH-----YYGT-E----YLGACHGLSGILQVLLCEKNYVKSNPDIEKDIKETVDFL-LKL- 267 (423)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~-----~~~~-~----~~G~aHG~~GI~~~Ll~~~~~~~~~~~~~~~i~~~~~~l-~~~- 267 (423)
+.+. .. . .....++ |... . .+..+|.+ =..+.|+.++..++ ++.+++.++++.+++ .+.
T Consensus 214 ~~~~-~~--~----~~~~~~e~~d~dw~~~~~~~g~~~~pgh~i-e~~wlL~~a~~~~~-~~~~l~~A~~~~~~~~~~~~ 284 (402)
T 1fp3_A 214 ILQH-VQ--R----DGQAVLENVSEDGEELSGCLGRHQNPGHAL-EAGWFLLRHSSRSG-DAKLRAHVIDTFLLLPFRSG 284 (402)
T ss_dssp HHTT-EE--T----TTTEECSEEETTSCBCCHHHHHEECHHHHH-HHHHHHHHHHHHTT-CHHHHHHHHHHHTHHHHHHH
T ss_pred HHHH-hC--c----CCCeEEEEECCCCCccCCCCCCCCCCCcHH-HHHHHHHHHHHHcC-ChHHHHHHHHHHHHHHHHHh
Confidence 5443 11 0 0001111 1100 0 01112221 02335778888887 788999999999998 663
Q ss_pred cCCC-CCCCCCCccCCCCCccccccccccccccCchHHHHHHHHHHHHhCcHhHHHHHHHHHHHHHH
Q psy3913 268 QMPN-GNFPADLKELYSPTDAKSAANELVHWCHGAPGVIYLMAKAYLFWGEEKYLNSCIKCGEVIWE 333 (423)
Q Consensus 268 ~~~~-g~wp~~~~~~~~~~~~~~~~~~~~~WChG~~Gi~~~l~~~~~~~~~~~~~~~a~~~~~~~~~ 333 (423)
.+++ |.+.........+.. .........|.|..+- ..++.+|+++++++|++.++++.+.+++
T Consensus 285 ~d~~~gg~~~~~~~~g~~~~-~l~d~~~~~W~qaea~--~a~l~ly~~tgd~~yl~~a~~~~~~~~~ 348 (402)
T 1fp3_A 285 WDADHGGLFYFQDADGLCPT-QLEWAMKLWWPHSEAM--IAFLMGYSESGDPALLRLFYQVAEYTFR 348 (402)
T ss_dssp BCTTTCSBCSCEETTSCCCS-STTTTCEEHHHHHHHH--HHHHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_pred ccCCCCCEEEeecCCCCccc-cCcCCCcCcHHHHHHH--HHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 3322 433221110000000 0001222346664433 3488899999999999999999888865
No 25
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A*
Probab=94.39 E-value=0.17 Score=49.20 Aligned_cols=132 Identities=16% Similarity=0.126 Sum_probs=83.3
Q ss_pred HHHHhccccccCCCcchHHHHHHHHHHHHHc-cCCC-CCCCCCCccCCCCCccccccccccccccCchHHHHHHHHHHHH
Q psy3913 237 LQVLLCEKNYVKSNPDIEKDIKETVDFLLKL-QMPN-GNFPADLKELYSPTDAKSAANELVHWCHGAPGVIYLMAKAYLF 314 (423)
Q Consensus 237 ~~~Ll~~~~~~~~~~~~~~~i~~~~~~l~~~-~~~~-g~wp~~~~~~~~~~~~~~~~~~~~~WChG~~Gi~~~l~~~~~~ 314 (423)
+.++..++. ++ ++.+++.++.+++++.+. +++. |.|-.+..... .... ...++.-+=++.+++. +++
T Consensus 57 i~~~a~a~~-~g-~~~~l~~A~~~~~fl~~~~~D~~~GG~~~s~d~dg-------~~~~-~k~lyd~Af~i~al~~-~~~ 125 (421)
T 2zbl_A 57 LHVYSVAAS-MG-RPGAYDLVDHGIKAMNGALRDKKYGGWYACVNDQG-------VVDA-SKQGYQHFFALLGAAS-AVT 125 (421)
T ss_dssp HHHHHHHHH-TT-CTTHHHHHHHHHHHHTTTTBCTTTSSBCSEEETTE-------EEEC-CEEHHHHHHHHHHHHH-HHT
T ss_pred HHHHHHHHH-cC-ChhHHHHHHHHHHHHHHhccCcCCCeEEEEeCCCC-------CcCC-chhHHHHHHHHHHHHH-HHH
Confidence 344555555 66 688999999999999985 3433 55543321100 0111 1234444555556666 788
Q ss_pred hCcHhHHHHHHHHHHHHHHh------CC-C---CCCCcccC---chhh---HHHHHHHHHHHcCChHHHHHHHHHHHHhh
Q psy3913 315 WGEEKYLNSCIKCGEVIWEK------GL-L---KKGPGICH---GVSG---NGYAFLLLYRLTKDEQYLHKAYLFANFML 378 (423)
Q Consensus 315 ~~~~~~~~~a~~~~~~~~~~------g~-~---~~~~~LCh---G~aG---~~~~ll~l~~~t~~~~~~~~a~~~~~~~~ 378 (423)
++++.+++.++++.+.+.+. |. . ..+..... +..+ .+..+++++++|++++|+++|.++++.+.
T Consensus 126 tg~~~~l~~a~~~~~~l~~~~~d~~~Ggf~~~~d~d~~~~~~~~~~n~~m~~~~al~~l~~~tgd~~~~~~A~~~~~~~~ 205 (421)
T 2zbl_A 126 TGHPEARKLLDYTIEVIEKYFWSEEEQMCLESWDEAFSQTEDYRGGNANMHAVEAFLIVYDVTHDKKWLDRALRIASVII 205 (421)
T ss_dssp TTCTTHHHHHHHHHHHHHHHTEETTTTEECCEECTTSCSBCSCEEHHHHHHHHHHHHHHHHTTCCTHHHHHHHHHHHHHC
T ss_pred hCCccHHHHHHHHHHHHHHHhccCCCCCeeeeecCCCCcccccCCCcHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHH
Confidence 99999999999888877542 21 0 00000111 1233 36788999999999999999999999875
Q ss_pred c
Q psy3913 379 S 379 (423)
Q Consensus 379 ~ 379 (423)
.
T Consensus 206 ~ 206 (421)
T 2zbl_A 206 H 206 (421)
T ss_dssp C
T ss_pred H
Confidence 4
No 26
>1gxm_A Pectate lyase; mechanism, elimination; 1.32A {Cellvibrio cellulosa} SCOP: a.102.5.1 PDB: 1gxn_A 1gxo_A*
Probab=90.44 E-value=1.7 Score=40.08 Aligned_cols=135 Identities=9% Similarity=0.030 Sum_probs=83.1
Q ss_pred hHHHHHHHhccccccCCCcchHHHHHHHHHHHHHccCCCCCCCCCCccCCCCCccccccccccccccCchHHHHHHH-HH
Q psy3913 233 LSGILQVLLCEKNYVKSNPDIEKDIKETVDFLLKLQMPNGNFPADLKELYSPTDAKSAANELVHWCHGAPGVIYLMA-KA 311 (423)
Q Consensus 233 ~~GI~~~Ll~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~g~wp~~~~~~~~~~~~~~~~~~~~~WChG~~Gi~~~l~-~~ 311 (423)
.+-++.+|.+++...+ ++.+.+.+.++++|++..|.++|.||-...+.. .-....-+|-...+.+.-++ .+
T Consensus 76 Ta~vl~~Larv~~~~~-~~~y~~Ai~Rgl~wlL~mQ~~nGGWpqFdpd~~-------~Yl~~IpFnDDvtarvLelL~~~ 147 (332)
T 1gxm_A 76 TITEMVFLAEVYKSGG-NTKYRDAVRKAANFLVNSQYSTGALPQFYPLKG-------GYSDHATFNDNGMAYALTVLDFA 147 (332)
T ss_dssp THHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHCCTTSCCBSEESCCS-------GGGGSEECGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcccc-chHHHHHHHHHHHHHHhccCCCCCccccCCCcc-------cccccCCcchHHHHHHHHHHHHH
Confidence 5667788888877665 578999999999999999999999975433210 11112345666666553333 33
Q ss_pred HH--------HhCc---HhHHHHHHHHHHHHHHhCCC---------------C---------CCCcccCchh-hHHHHHH
Q psy3913 312 YL--------FWGE---EKYLNSCIKCGEVIWEKGLL---------------K---------KGPGICHGVS-GNGYAFL 355 (423)
Q Consensus 312 ~~--------~~~~---~~~~~~a~~~~~~~~~~g~~---------------~---------~~~~LChG~a-G~~~~ll 355 (423)
.. ++.+ ++....++++++.+++.-.. + .-++||-..+ |+..+|+
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~av~Rgid~Llk~Qe~dggw~g~Wg~qydygT~~Pa~ARayE~psL~~~es~giv~~LM 227 (332)
T 1gxm_A 148 ANKRAPFDTDVFSDNDRTRFKTAVTKGTDYILKAQWKQNGVLTVWCAQHGALDYQPKKARAYELESLSGSESVGVLAFLM 227 (332)
T ss_dssp HTTCTTSCSTTSCHHHHHHHHHHHHHHHHHHHHHSCEETTEECCCCSEECTTTCCBCCCSTTCCSSEETTTHHHHHHHHT
T ss_pred HhccCCccccccccchhhhhHHHHHHHHHHHHHhhCccCCCcCeeccccccccccccccccccccchhHHHHHHHHHHhc
Confidence 21 0222 45667788888888652110 0 1236665443 5555555
Q ss_pred HHHHHcCChHHHHHHHHHHHHhh
Q psy3913 356 LLYRLTKDEQYLHKAYLFANFML 378 (423)
Q Consensus 356 ~l~~~t~~~~~~~~a~~~~~~~~ 378 (423)
.... +++++....+.++|+.
T Consensus 228 ~~~~---~~~v~~aI~~Av~WL~ 247 (332)
T 1gxm_A 228 TQPQ---TAEIEQAVRAGVAWFN 247 (332)
T ss_dssp TSCC---CHHHHHHHHHHHHHHT
T ss_pred cCCC---CHHHHHHHHHHHHHHH
Confidence 5432 6788777777777764
No 27
>1r76_A Pectate lyase; A-helical structure; 2.65A {Azospirillum irakense} SCOP: a.102.5.1
Probab=90.07 E-value=2.2 Score=40.53 Aligned_cols=93 Identities=13% Similarity=0.098 Sum_probs=60.3
Q ss_pred hHHHHHHHhccccc-c--CCCcchHHHHHHHHHHHHHccCCCCCCCCCCccCCCCCccccccccccccccCchHHHHH-H
Q psy3913 233 LSGILQVLLCEKNY-V--KSNPDIEKDIKETVDFLLKLQMPNGNFPADLKELYSPTDAKSAANELVHWCHGAPGVIYL-M 308 (423)
Q Consensus 233 ~~GI~~~Ll~~~~~-~--~~~~~~~~~i~~~~~~l~~~~~~~g~wp~~~~~~~~~~~~~~~~~~~~~WChG~~Gi~~~-l 308 (423)
.+-++.+|.+++.. . + ++.+.+.+.++++|++..|.++|.||-...+.. .-....-+|-..++.+.- |
T Consensus 151 Ta~vl~aL~rv~~~~t~~~-~~~y~~Ai~Rgl~wlL~mQ~~nGGWpqFdpdn~-------~y~~~IpFnDDvt~rvle~L 222 (408)
T 1r76_A 151 TVTEIRFLAQVVSQLAPEE-AAPYRDAALKGIEYLLASQFPNGGWPQVWPLEG-------GYHDAITYNDDALVHVAELL 222 (408)
T ss_dssp THHHHHHHHHHHHHSCGGG-CHHHHHHHHHHHHHHHHHSCTTSCCBSBSSCCC-------GGGGSEECGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhccccc-cHHHHHHHHHHHHHHHHccCCCCCCcCcCcccc-------ccccCCCcCcHHHHHHHHHH
Confidence 56677888887776 4 4 678999999999999999999999976544310 011113345555555533 4
Q ss_pred HHHHHH-----hCc----HhHHHHHHHHHHHHHH
Q psy3913 309 AKAYLF-----WGE----EKYLNSCIKCGEVIWE 333 (423)
Q Consensus 309 ~~~~~~-----~~~----~~~~~~a~~~~~~~~~ 333 (423)
..+..- +-+ .+....++++++.+++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~av~Rgi~~Ll~ 256 (408)
T 1r76_A 223 SDIAAGRDGFGFVPPAIRTRALEATNAAIHCIVE 256 (408)
T ss_dssp HHHHHTCTTCTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhccCcccccchhhhhhHHHHHHHHHHHHHH
Confidence 444431 112 3566778888888865
No 28
>1dl2_A Class I alpha-1,2-mannosidase; alpha-alpha helix barrel, hydrolase; HET: NAG NDG BMA MAN; 1.54A {Saccharomyces cerevisiae} SCOP: a.102.2.1 PDB: 1g6i_A*
Probab=85.96 E-value=5.3 Score=39.42 Aligned_cols=121 Identities=17% Similarity=0.065 Sum_probs=70.5
Q ss_pred CcchHHHHHHHHHHHHHccC--CCCCCCCCCccCCCCCccccccccccccccCc---hHHH---HHHHHHHHHhCcHhHH
Q psy3913 250 NPDIEKDIKETVDFLLKLQM--PNGNFPADLKELYSPTDAKSAANELVHWCHGA---PGVI---YLMAKAYLFWGEEKYL 321 (423)
Q Consensus 250 ~~~~~~~i~~~~~~l~~~~~--~~g~wp~~~~~~~~~~~~~~~~~~~~~WChG~---~Gi~---~~l~~~~~~~~~~~~~ 321 (423)
++.+++.+....+.|+..++ ++| -|...-+... ......+|..|. +++. .=+.++.++++|++|.
T Consensus 123 d~~lL~kA~dLadrLlpAFd~Tptg-iP~~~vnl~~------g~~~~~~~~~~~s~~Ae~gSl~LEF~~LS~LTGd~~Y~ 195 (511)
T 1dl2_A 123 KTVYLNKAIDLGDRLALAFLSTQTG-IPYSSINLHS------GQAVKNHADGGASSTAEFTTLQMEFKYLAYLTGNRTYW 195 (511)
T ss_dssp HHHHHHHHHHHHHHHHGGGGSSSSS-CCCSEEETTT------CCEECCSSGGGCEEHHHHSSCHHHHHHHHHHHTCHHHH
T ss_pred cHHHHHHHHHHHHHHHHhhcCCCCC-CCCceeeccc------CCCCCCCCCCcccccccccceeeeHHHHHHHHCChHHH
Confidence 45677888888888887655 444 3433222110 011112343332 2222 2266778899999999
Q ss_pred HHHHHHHHHHHHh--------CCC-----CCCCcccCchhh-------HHHHHHHHHHHcCChHHHHHHHHHHHHh
Q psy3913 322 NSCIKCGEVIWEK--------GLL-----KKGPGICHGVSG-------NGYAFLLLYRLTKDEQYLHKAYLFANFM 377 (423)
Q Consensus 322 ~~a~~~~~~~~~~--------g~~-----~~~~~LChG~aG-------~~~~ll~l~~~t~~~~~~~~a~~~~~~~ 377 (423)
+.|+++.+.+|+. |+. ..+-.++....| --.-|++.|.+++++.|+++..+.++-+
T Consensus 196 ~~a~r~~~~l~~~~~~~~~~~GL~p~~i~~~tg~~~~~~~~lGa~~DS~YEYLlK~~il~~d~~y~~m~~~a~~~i 271 (511)
T 1dl2_A 196 ELVERVYEPLYKNNDLLNTYDGLVPIYTFPDTGKFGASTIRFGSRGDSFYEYLLKQYLLTHETLYYDLYRKSMEGM 271 (511)
T ss_dssp HHHHTTHHHHHHHHTHHHHHTTCCBSEECTTTCCBCSCCBCSSTTTHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcccccCCCCCCcceEEcCCCCCccCCeeeecCCCCcHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 9999999988752 332 011112222222 2356677888889998888777666544
No 29
>3e7j_A Heparinase II protein; alpha and beta lyase, alpha6/alpha6 incomplete toroid, sugar protein, lyase; HET: NAG GCU GCD; 2.10A {Pedobacter heparinus} PDB: 3e80_A* 2fut_A* 2fuq_A*
Probab=85.58 E-value=5.8 Score=41.22 Aligned_cols=213 Identities=10% Similarity=-0.028 Sum_probs=100.6
Q ss_pred HHHHHHHHHhCChhHHHHHHHHHHHHHHHHhhccccCCCCccccccchhHHHHHHHHHHHhCcccCcHHHHHHHHHHHHH
Q psy3913 123 AVLGVFYNAVGDKERSQCHFDMYTKLATHIKAIDYVKFGGDEFLVGRAGYLAGIIWAERQLGRQIMSLEDRTAICNALIL 202 (423)
Q Consensus 123 ~l~~~l~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~d~l~G~aG~l~~ll~l~~~~~~~~~~~~~i~~i~~~~~~ 202 (423)
..++..+..+++.++++.+.+.+..+++. .+|.. ..|+.-+.+..+.++...+..+.+. +..+..+++.+.|.+
T Consensus 86 ~~LalAylLtgD~ryad~a~~~L~~~~~~---~~W~~--~~Dl~~~~a~~~~~lA~aYD~Lyd~-Ls~eeR~~Ir~~I~~ 159 (749)
T 3e7j_A 86 ELMALNYLMTKDPKVGREAITSIIDTLET---ATFKP--AGDISRGIGLFMVTGAIVYDWCYDQ-LKPEEKTRFVKAFVR 159 (749)
T ss_dssp HHHHHHHHHHCCHHHHHHHHHHHHHHHHH---CCCCC--CTTTHHHHHHHHHHHHHHHHHTGGG-CCHHHHHHHHHHHHH
T ss_pred HHHHHHHhhcCCHHHHHHHHHHHHHHhhc---ccCCC--cccchHHHHHHHHHHHHHHHHHhhh-CCHHHHHHHHHHHHH
Confidence 34455577889998888887777666643 24532 2454334567777777777777653 444444445555544
Q ss_pred cCccccccccCCCCcceeec-CCcc-cccccchHHHHHHHhccccccCCCcchHHHH-HHHHHHHHH--cc-CCCCCCCC
Q psy3913 203 SGRSYSQANNLRCPLMYHYY-GTEY-LGACHGLSGILQVLLCEKNYVKSNPDIEKDI-KETVDFLLK--LQ-MPNGNFPA 276 (423)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~-~~~~-~G~aHG~~GI~~~Ll~~~~~~~~~~~~~~~i-~~~~~~l~~--~~-~~~g~wp~ 276 (423)
.+....... .+..+.|. ...+ ..+|+|....+++++. + +++..+.+ ..+++.... .+ .++|.|+.
T Consensus 160 ~~~~p~~~w---~~~~~~~~~~~~NWn~vc~Gll~aALAL~~--d----~pe~~~~~~~~~~~~~~~l~~~~~~DG~~~E 230 (749)
T 3e7j_A 160 LAKMLECGY---PPVKDKSIVGAASEWMIMRDLLSVGIAIYD--E----FPEMYNLAAGRFFKEHLVARNWFYPSHNYHQ 230 (749)
T ss_dssp HHTTSTTCS---SSCSSCSSSSGGGTHHHHTHHHHHHHHTTT--T----CTHHHHHHHHHHHHTHHHHHHHHGGGCCCSS
T ss_pred HHHHHHHhc---cccccccccCCChHHHHHHHHHHHHHHHcC--C----cHHHHHHHHHHHHHhhhhhhcccCCCCCccc
Confidence 332111000 01000111 1111 2467753333333221 1 22222222 122222111 12 36777741
Q ss_pred CCccCCCCCccccccccccccccCchHHHHHHHHHHHHhCcHhHHHHHHHHHHHHHHhCCCCCCCcccCchh--------
Q psy3913 277 DLKELYSPTDAKSAANELVHWCHGAPGVIYLMAKAYLFWGEEKYLNSCIKCGEVIWEKGLLKKGPGICHGVS-------- 348 (423)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~WChG~~Gi~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~g~~~~~~~LChG~a-------- 348 (423)
.. ..|-+|..-.+.++..+...++.+.+....+++.+.....-.. .+..+..|.+
T Consensus 231 --------------G~--~Yw~yg~~~l~~~~~aL~~~tg~d~~~p~l~k~a~y~l~~~~p-~g~~~nfgDs~~~~~~p~ 293 (749)
T 3e7j_A 231 --------------GM--SALNVRFTNDLFALWILDRMGAGNVFNPGQQFILYDAIYKRRP-DGQILAGGDVDYSRKKPK 293 (749)
T ss_dssp --------------HH--HHHHHHHHHHHHHHHHHHHHTTCCCSCGGGGGTTHHHHHTBCT-TSCBCCCSSCCCCSSSCC
T ss_pred --------------cH--HHHHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHHeeCC-CCceeecCCCCcccCccc
Confidence 22 3588888887776666666664433323334444444332111 1111111211
Q ss_pred hHHHHHHHHHHHcCChHHH
Q psy3913 349 GNGYAFLLLYRLTKDEQYL 367 (423)
Q Consensus 349 G~~~~ll~l~~~t~~~~~~ 367 (423)
+....+..+++.++|+.+.
T Consensus 294 ~~~~al~~~a~~~~dp~l~ 312 (749)
T 3e7j_A 294 YYTMPALLAGSYYKDEYLN 312 (749)
T ss_dssp CCHHHHHHHHHHHTCHHHH
T ss_pred cchHHHHHHHHhhCCHHHH
Confidence 2234555668889998765
No 30
>1r76_A Pectate lyase; A-helical structure; 2.65A {Azospirillum irakense} SCOP: a.102.5.1
Probab=84.82 E-value=18 Score=34.32 Aligned_cols=124 Identities=10% Similarity=0.016 Sum_probs=75.5
Q ss_pred HHHHHHHHHHHccCCCCCCCCCCccCCCCCcccccc--------cccccc----------------ccCchHHHHHHHHH
Q psy3913 256 DIKETVDFLLKLQMPNGNFPADLKELYSPTDAKSAA--------NELVHW----------------CHGAPGVIYLMAKA 311 (423)
Q Consensus 256 ~i~~~~~~l~~~~~~~g~wp~~~~~~~~~~~~~~~~--------~~~~~W----------------ChG~~Gi~~~l~~~ 311 (423)
.++++.+.++..|.++|.||....-........... ....++ +..++-++.+|.++
T Consensus 82 ~A~~iAd~ll~~Q~~~GGW~kn~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~T~DnddTa~vl~aL~rv 161 (408)
T 1r76_A 82 AARHVADVIVSFQTPAGGWGKNQPRDGALRLPGQHYTGENVAKVKSGSNDLDAARDRDWHYVGTIDNDATVTEIRFLAQV 161 (408)
T ss_dssp HHHHHHHHHHHHCCTTSCCCSSCCSSSCCCCTTCCSSCCCCCCCC---------CCCCCSSSSBCGGGTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHccccCCCCCCccccccccchhhhhcccccccccccccccchhhcccccCCCCCCCCchHHHHHHHHHHH
Confidence 588899999999999999986432211100000000 000112 23466778888888
Q ss_pred HHH-h--CcHhHHHHHHHHHHHHHH----hC-CC---------CCCCcccCchhhHHHHHHHHHHHc-C-----C----h
Q psy3913 312 YLF-W--GEEKYLNSCIKCGEVIWE----KG-LL---------KKGPGICHGVSGNGYAFLLLYRLT-K-----D----E 364 (423)
Q Consensus 312 ~~~-~--~~~~~~~~a~~~~~~~~~----~g-~~---------~~~~~LChG~aG~~~~ll~l~~~t-~-----~----~ 364 (423)
+.. + +++.+.+.+.++++.+.. .| +. .....+|..+++...-+|...... . + .
T Consensus 162 ~~~~t~~~~~~y~~Ai~Rgl~wlL~mQ~~nGGWpqFdpdn~~y~~~IpFnDDvt~rvle~L~~~~~~~~~~~~~~~~~~~ 241 (408)
T 1r76_A 162 VSQLAPEEAAPYRDAALKGIEYLLASQFPNGGWPQVWPLEGGYHDAITYNDDALVHVAELLSDIAAGRDGFGFVPPAIRT 241 (408)
T ss_dssp HHHSCGGGCHHHHHHHHHHHHHHHHHSCTTSCCBSBSSCCCGGGGSEECGGGHHHHHHHHHHHHHHTCTTCTTSCHHHHH
T ss_pred HhhccccccHHHHHHHHHHHHHHHHccCCCCCCcCcCccccccccCCCcCcHHHHHHHHHHHHHHhccCcccccchhhhh
Confidence 887 6 889999999999998854 12 21 124578888888777766544432 2 1 2
Q ss_pred HHHHHHHHHHHHhhc
Q psy3913 365 QYLHKAYLFANFMLS 379 (423)
Q Consensus 365 ~~~~~a~~~~~~~~~ 379 (423)
+....+.+-+++++.
T Consensus 242 ~~~~av~Rgi~~Ll~ 256 (408)
T 1r76_A 242 RALEATNAAIHCIVE 256 (408)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHH
Confidence 455556667777753
No 31
>1nxc_A Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA; glycosidase, structural genomics, PSI, protein initiative; HET: NAG BMA MAN; 1.51A {Mus musculus} SCOP: a.102.2.1
Probab=81.13 E-value=17 Score=35.47 Aligned_cols=131 Identities=17% Similarity=0.105 Sum_probs=74.6
Q ss_pred HHhccccccCCCcchHHHHHHHHHHHHHccC-CCCCCCCCCccCCCCCcccccccccccccc----CchHHHHH---HHH
Q psy3913 239 VLLCEKNYVKSNPDIEKDIKETVDFLLKLQM-PNGNFPADLKELYSPTDAKSAANELVHWCH----GAPGVIYL---MAK 310 (423)
Q Consensus 239 ~Ll~~~~~~~~~~~~~~~i~~~~~~l~~~~~-~~g~wp~~~~~~~~~~~~~~~~~~~~~WCh----G~~Gi~~~---l~~ 310 (423)
.|+.++...+ ++.+++.+....+.|+..++ ++| -|...-+... .......|.. ..+++..+ +.+
T Consensus 113 GLLSAy~Lsg-d~~lL~kA~dLad~LlpAFdTptg-iP~~~vnl~~------g~~~~~~~~~~~~s~lAe~gsl~LEF~~ 184 (478)
T 1nxc_A 113 GLLSAYYLSG-EEIFRKKAVELGVKLLPAFHTPSG-IPWALLNMKS------GIGRNWPWASGGSSILAEFGTLHLEFMH 184 (478)
T ss_dssp HHHHHHHHHC-CHHHHHHHHHHHHHHGGGGCSSSS-CCCSEEETTT------CCEECCTTSGGGCEEHHHHTTCHHHHHH
T ss_pred hhhhhhhccC-CHHHHHHHHHHHHHHHHhhcCCCC-CCcceeeccc------ccCCCCcccCCCCcccccccchhhhHHH
Confidence 3455555556 56788888888888887665 555 3432221110 0011123332 23444322 567
Q ss_pred HHHHhCcHhHHHHHHHHHHHHHHh----CCC-----CC-----CCcccCchhh--HHHHHHHHHHHcC--ChHHHHHHHH
Q psy3913 311 AYLFWGEEKYLNSCIKCGEVIWEK----GLL-----KK-----GPGICHGVSG--NGYAFLLLYRLTK--DEQYLHKAYL 372 (423)
Q Consensus 311 ~~~~~~~~~~~~~a~~~~~~~~~~----g~~-----~~-----~~~LChG~aG--~~~~ll~l~~~t~--~~~~~~~a~~ 372 (423)
+.++++|++|.+.++++.+.+++. |+. .. +....-|..| --.-|++.+-+++ ++.|++...+
T Consensus 185 LS~lTGd~~Y~~~a~~~~~~l~~~~~~~GL~p~~i~~~tg~~~~~~~~~Ga~~DS~YEYLlK~~il~g~~d~~~~~m~~~ 264 (478)
T 1nxc_A 185 LSHLSGDPVFAEKVMKIRTVLNKLDKPEGLYPNYLNPSSGQWGQHHVSVGGLGDSFYEYLLKAWLMSDKTDLEAKKMYFD 264 (478)
T ss_dssp HHHHHCCTHHHHHHHHHHHHHHHSCCGGGCCCSEECTTTCCBCSCEECSSTTTHHHHHHHHHHHHHTTTCCHHHHHHHHH
T ss_pred HHHHHCChHHHHHHHHHHHHHHhcCCCCCccccccCCCCCCccCceeeecCCCchHHHHHHHHHHHcCCchHHHHHHHHH
Confidence 788999999999999998888763 332 00 1112222222 2345577777886 6778777766
Q ss_pred HHHHh
Q psy3913 373 FANFM 377 (423)
Q Consensus 373 ~~~~~ 377 (423)
.++.+
T Consensus 265 a~~~i 269 (478)
T 1nxc_A 265 AVQAI 269 (478)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 65544
No 32
>1ks8_A Endo-B-1,4-glucanase; cellulase, endoglucanase, termite, glycosyl hydrolase, family 9, (alpha/alpha)6; 1.40A {Nasutitermes takasagoensis} SCOP: a.102.1.2 PDB: 1ksc_A 1ksd_A
Probab=80.58 E-value=16 Score=35.20 Aligned_cols=115 Identities=19% Similarity=0.187 Sum_probs=66.4
Q ss_pred cchHHHHHHHHHHHHHccCCCC--------------CCCCCCccCCCCCcccccccccccc----ccC---chHHHHHHH
Q psy3913 251 PDIEKDIKETVDFLLKLQMPNG--------------NFPADLKELYSPTDAKSAANELVHW----CHG---APGVIYLMA 309 (423)
Q Consensus 251 ~~~~~~i~~~~~~l~~~~~~~g--------------~wp~~~~~~~~~~~~~~~~~~~~~W----ChG---~~Gi~~~l~ 309 (423)
+.+++.|+=.++|+++.+.+.| .|- +++.. ..+..+.. .-| +.-.+-+|+
T Consensus 90 ~d~ldeikwg~D~llk~~~~~g~~y~qVgd~~~Dh~~w~--~Pe~~-------~~~R~~y~~~~~~pgs~~a~~~AAalA 160 (433)
T 1ks8_A 90 DDGRKAVKWATDYFIKAHTSQNEFYGQVGQGDADHAFWG--RPEDM-------TMARPAYKIDTSRPGSDLAGETAAALA 160 (433)
T ss_dssp HHHHHHHHHHHHHHHHHCCBTTBEEEEESCHHHHHTCCS--CGGGC-------CSCCCEEEECSSSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhccCCCcEEEEeCCCCcCCcccC--CHhhC-------CCCCceeeccCCCCccHHHHHHHHHHH
Confidence 5688888889999999775332 131 11110 01111111 122 223345677
Q ss_pred HHHHHhC--cHhHHHHHHHHHHHHHHhCCCCCCCcc----------cCchhh----HHHHHHHHHHHcCChHHHHHHHHH
Q psy3913 310 KAYLFWG--EEKYLNSCIKCGEVIWEKGLLKKGPGI----------CHGVSG----NGYAFLLLYRLTKDEQYLHKAYLF 373 (423)
Q Consensus 310 ~~~~~~~--~~~~~~~a~~~~~~~~~~g~~~~~~~L----------ChG~aG----~~~~ll~l~~~t~~~~~~~~a~~~ 373 (423)
.++++++ |+.|-+.+.+.++.+|+... +.++. .-+.+| ...+-..||+.|+|++|++.+...
T Consensus 161 ~as~vfk~~D~~yA~~~L~~A~~~~~fa~--~~~~~y~~~~~~~~~~Y~ss~~~DE~~WAAa~Ly~aTgd~~Yl~~~~~~ 238 (433)
T 1ks8_A 161 AASIVFRNVDGTYSNNLLTHARQLFDFAN--NYRGKYSDSITDARNFYASADYRDELVWAAAWLYRATNDNTYLNTAESL 238 (433)
T ss_dssp HHHHHTTTTCHHHHHHHHHHHHHHHHHHH--HSCCCHHHHSGGGGGTSCCCCTHHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred HHHHhccccCHHHHHHHHHHHHHHHHHHH--HCCCcccCCCCcCCCCCCCCCcccHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 7888885 67777777777777765221 01111 111244 356667889999999999998876
Q ss_pred HHH
Q psy3913 374 ANF 376 (423)
Q Consensus 374 ~~~ 376 (423)
...
T Consensus 239 ~~~ 241 (433)
T 1ks8_A 239 YDE 241 (433)
T ss_dssp HHH
T ss_pred HHh
Confidence 543
No 33
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus}
Probab=79.59 E-value=8.8 Score=38.50 Aligned_cols=130 Identities=12% Similarity=0.012 Sum_probs=74.8
Q ss_pred HHHHhccccccCCCcchHHHHHHHHHHHHHccC--CC-C-CCCCCCccCCCCCccccccccccccccCchHHH--HHHHH
Q psy3913 237 LQVLLCEKNYVKSNPDIEKDIKETVDFLLKLQM--PN-G-NFPADLKELYSPTDAKSAANELVHWCHGAPGVI--YLMAK 310 (423)
Q Consensus 237 ~~~Ll~~~~~~~~~~~~~~~i~~~~~~l~~~~~--~~-g-~wp~~~~~~~~~~~~~~~~~~~~~WChG~~Gi~--~~l~~ 310 (423)
+++.+.+++.++ ++.+++.+..-.+.+.+.+. +. | .|..... +.. .+.|++..-+ ..|++
T Consensus 309 ~WAA~eLy~ATg-d~~YL~~a~~~a~~l~~~~~~~~~~g~~w~~~d~----------~~r---~~~d~a~~gl~~iaLl~ 374 (586)
T 3h7l_A 309 LLASVELFKATK-ETRYLEESRLWAQRLVARQMSDEQIQHFWSANQD----------GSR---PYFHAAEAGLPTIALCE 374 (586)
T ss_dssp HHHHHHHHHHHC-CHHHHHHHHHHHHHHHTTEECCSSCSSEEBSSSS----------SSS---BCCCTTTTTHHHHHHHH
T ss_pred HHHHHHHHHHhC-CHHHHHHHHHHHHHHHHhccCCccCCCcCCCccc----------CCc---ccccccccHHHHHHHHH
Confidence 678888888888 78899988887777776542 22 2 3532111 011 2466654332 23566
Q ss_pred HHHHhCcHhHHHHHHHHHHHHHH------h------C----CC-------CCCCc---------ccCc----hhhHHHHH
Q psy3913 311 AYLFWGEEKYLNSCIKCGEVIWE------K------G----LL-------KKGPG---------ICHG----VSGNGYAF 354 (423)
Q Consensus 311 ~~~~~~~~~~~~~a~~~~~~~~~------~------g----~~-------~~~~~---------LChG----~aG~~~~l 354 (423)
....+.++.+.+.+++.++.... + | +. +..+. .-+| ++-++.++
T Consensus 375 l~~~~~d~~~~~~a~~~i~~~~d~~l~~~~~~~npfg~~~~~~~~~~~~~~~~y~~p~~~~~~y~WqGsN~~~an~a~~~ 454 (586)
T 3h7l_A 375 YLAIEDDSVQTESVKCIVNRACEFEIKISNKVTNPFGYPRQYVKGVNESKRDAFFVAHNNESGYWWQGENARLGSLATMA 454 (586)
T ss_dssp HHHHCCSTTTTHHHHHHHHHHHHHHHHHHHSSCCSSCCCCEEECCTTSCCEEESSCCSSSTTSSCCCCCHHHHHHHHHHH
T ss_pred hhhhcCChHHHHHHHHHHHHHhhhhhhhcccccCccccHHHHhhhhccccccccccccCCCCCCeeeChHHHHHHHHHHH
Confidence 66677765444444443333211 0 0 10 00011 1113 34466677
Q ss_pred HHHHHHcCC----hHHHHHHHHHHHHhhch
Q psy3913 355 LLLYRLTKD----EQYLHKAYLFANFMLSD 380 (423)
Q Consensus 355 l~l~~~t~~----~~~~~~a~~~~~~~~~~ 380 (423)
+.+++.+++ .+|++.|..-+++++.+
T Consensus 455 ~~a~~~~~~~~~~~~y~~~a~~qldyiLG~ 484 (586)
T 3h7l_A 455 YLAQPHIASQEIQQQLSVFAQDALNWIVGL 484 (586)
T ss_dssp HHSGGGCCCHHHHHHHHHHHHHHHHHHBTC
T ss_pred HHHHHhcCCchhHHHHHHHHHHhhhhhccC
Confidence 777888998 88999999999999854
No 34
>1nxc_A Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA; glycosidase, structural genomics, PSI, protein initiative; HET: NAG BMA MAN; 1.51A {Mus musculus} SCOP: a.102.2.1
Probab=79.07 E-value=5.4 Score=39.03 Aligned_cols=74 Identities=18% Similarity=0.235 Sum_probs=51.3
Q ss_pred HHHHHHHHHHhCcHhHHHHHHHHHHHHHH-----hCCCC----------CCCcc----cCchhhHH---HHHHHHHHHcC
Q psy3913 305 IYLMAKAYLFWGEEKYLNSCIKCGEVIWE-----KGLLK----------KGPGI----CHGVSGNG---YAFLLLYRLTK 362 (423)
Q Consensus 305 ~~~l~~~~~~~~~~~~~~~a~~~~~~~~~-----~g~~~----------~~~~L----ChG~aG~~---~~ll~l~~~t~ 362 (423)
+=-|+.||.+++++.+++.|+..++.+.. .|++. .+++. |..+|+.+ .=|.+|+++|+
T Consensus 111 LGGLLSAy~Lsgd~~lL~kA~dLad~LlpAFdTptgiP~~~vnl~~g~~~~~~~~~~~~s~lAe~gsl~LEF~~LS~lTG 190 (478)
T 1nxc_A 111 VGGLLSAYYLSGEEIFRKKAVELGVKLLPAFHTPSGIPWALLNMKSGIGRNWPWASGGSSILAEFGTLHLEFMHLSHLSG 190 (478)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHHHHHGGGGCSSSSCCCSEEETTTCCEECCTTSGGGCEEHHHHTTCHHHHHHHHHHHC
T ss_pred hhhhhhhhhccCCHHHHHHHHHHHHHHHHhhcCCCCCCcceeecccccCCCCcccCCCCcccccccchhhhHHHHHHHHC
Confidence 34477888889999999999999988742 23320 01111 22344443 34578899999
Q ss_pred ChHHHHHHHHHHHHhh
Q psy3913 363 DEQYLHKAYLFANFML 378 (423)
Q Consensus 363 ~~~~~~~a~~~~~~~~ 378 (423)
|++|.+.|+++.+.+.
T Consensus 191 d~~Y~~~a~~~~~~l~ 206 (478)
T 1nxc_A 191 DPVFAEKVMKIRTVLN 206 (478)
T ss_dssp CTHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHH
Confidence 9999999998877653
No 35
>2v8i_A Pectate lyase; periplasm, beta-elimination, pectin degradation; 1.50A {Yersinia enterocolitica} PDB: 2v8k_A* 2v8j_A
Probab=77.65 E-value=6.6 Score=37.69 Aligned_cols=81 Identities=14% Similarity=0.100 Sum_probs=55.3
Q ss_pred HHHHHHHHHHHhCcHhHHHHHHHHHHHHHHhCCCC----CCCcc-c---CchhhHHHHHHHHHHHcCChHHHHHHHHHHH
Q psy3913 304 VIYLMAKAYLFWGEEKYLNSCIKCGEVIWEKGLLK----KGPGI-C---HGVSGNGYAFLLLYRLTKDEQYLHKAYLFAN 375 (423)
Q Consensus 304 i~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~g~~~----~~~~L-C---hG~aG~~~~ll~l~~~t~~~~~~~~a~~~~~ 375 (423)
.+..+.+++.+..|+++-+.+..+.... ..|-+. ..+.+ + .-..=.+++++.||+.|++++|++.|.++++
T Consensus 378 yll~~vra~~~s~D~~Lw~~~~~ma~~~-~lgdi~~~~~~~~~~~~~~~~~sp~lL~allEL~~atq~~~~l~lA~~~g~ 456 (543)
T 2v8i_A 378 FLISYARAYAIDNDPLLWKVARGIANDQ-GLGDIGTAPGKEVKVNMDTTNSDPYALFALLDLYHASQVADYRKLAEKIGD 456 (543)
T ss_dssp HHHHHHHHHHHSCCHHHHHHHHHHHHHT-TCEECTTBTTBSCEECTTCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_pred hhHHHHHHHHcCCCHHHHHHHHHHHhhC-CccccCCCcCcccccccCCCCcCHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 5677889999999999988877665432 111000 00000 0 0112357889999999999999999999999
Q ss_pred Hhhchhhhhc
Q psy3913 376 FMLSDDFKRN 385 (423)
Q Consensus 376 ~~~~~~~~~~ 385 (423)
.++++.+..|
T Consensus 457 nl~~~~~~~G 466 (543)
T 2v8i_A 457 NIIKIRYIDG 466 (543)
T ss_dssp HHHHHHEETT
T ss_pred HHHHHhhcCc
Confidence 9987765544
No 36
>1clc_A Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycosyl hydrolase; 1.90A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2
Probab=76.61 E-value=19 Score=36.60 Aligned_cols=119 Identities=22% Similarity=0.375 Sum_probs=66.6
Q ss_pred cchHHHHHHHHHHHHHccCCC--CC---------CCCC-CccCCCCCccccccccccccccC-chHHHHHHHHHHHHhC-
Q psy3913 251 PDIEKDIKETVDFLLKLQMPN--GN---------FPAD-LKELYSPTDAKSAANELVHWCHG-APGVIYLMAKAYLFWG- 316 (423)
Q Consensus 251 ~~~~~~i~~~~~~l~~~~~~~--g~---------wp~~-~~~~~~~~~~~~~~~~~~~WChG-~~Gi~~~l~~~~~~~~- 316 (423)
+.+++.++=.++|+++.+.+. |. |... +++... .......-+.- +...+-+|+.++++++
T Consensus 232 ~d~ldeikwg~Dyllk~q~~~~~g~~y~~vgd~~~~~~~~Pe~~~------~~R~~~~~~s~~a~e~AAAlAaAS~vfk~ 305 (639)
T 1clc_A 232 PDFLDELKYEIDWILTMQYPDGSGRVAHKVSTRNFGGFIMPENEH------DERFFVPWSSAATADFVAMTAMAARIFRP 305 (639)
T ss_dssp CHHHHHHHHHHHHHHTTBCTTSSCCBEEEEECSSCCCSCCGGGCC------SCCEEEEECHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHhccccCCCeEEEEecCCCCCCCCCchhcC------CCceEecCCcHHHHHHHHHHHHHHHhccc
Confidence 568888999999999986632 32 3211 111000 00000111111 2334566788888885
Q ss_pred -cHhHHHHHHHHHHHHHHh-----CCC-CCCCcc-c--Cchhh----HHHHHHHHHHHcCChHHHHHHHHHHH
Q psy3913 317 -EEKYLNSCIKCGEVIWEK-----GLL-KKGPGI-C--HGVSG----NGYAFLLLYRLTKDEQYLHKAYLFAN 375 (423)
Q Consensus 317 -~~~~~~~a~~~~~~~~~~-----g~~-~~~~~L-C--hG~aG----~~~~ll~l~~~t~~~~~~~~a~~~~~ 375 (423)
|+.|-+.+.+.++.+|+. +.. ..+.+. | -+.+| ...+-..||+.|+|++|++.+.....
T Consensus 306 ~D~~yA~~~L~~Ak~l~~fA~~~~~~~y~~~~~~~~g~Y~ss~~~DEl~WAAawLy~ATgd~~Yl~~a~~~~~ 378 (639)
T 1clc_A 306 YDPQYAEKCINAAKVSYEFLKNNPANVFANQSGFSTGEYATVSDADDRLWAAAEMWETLGDEEYLRDFENRAA 378 (639)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHCCSCCCCCCTTCCSCCCCCSCSHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHHHHHcCCCccCCCccccccccCCCCcchHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 677877777777777652 221 111010 1 11223 35566788999999999999876553
No 37
>1x9d_A Endoplasmic reticulum mannosyl-oligosaccharide 1, 2-alpha-mannosidase; substrate analogue, glycosyl hydrolase; HET: SMD; 1.41A {Homo sapiens} SCOP: a.102.2.1 PDB: 1fo3_A* 1fo2_A* 1fmi_A
Probab=75.53 E-value=20 Score=35.56 Aligned_cols=131 Identities=13% Similarity=0.055 Sum_probs=75.2
Q ss_pred HHhccccccCCCcchHHHHHHHHHHHHHccC-CCCCCCCCCccCCCCCccccccccccccccC--chHHH---HHHHHHH
Q psy3913 239 VLLCEKNYVKSNPDIEKDIKETVDFLLKLQM-PNGNFPADLKELYSPTDAKSAANELVHWCHG--APGVI---YLMAKAY 312 (423)
Q Consensus 239 ~Ll~~~~~~~~~~~~~~~i~~~~~~l~~~~~-~~g~wp~~~~~~~~~~~~~~~~~~~~~WChG--~~Gi~---~~l~~~~ 312 (423)
.|+-++...+ ++.+++.+....+.|+..++ ++|. |...-+... .......|..+ .+++. .=+.++.
T Consensus 177 GLLSAy~Lsg-d~~lL~kA~dLadrLlpAFdTptgi-P~~~vnl~~------g~~~~~~~~~~s~lAe~GSl~LEF~~LS 248 (538)
T 1x9d_A 177 GLLSAYHLSG-DSLFLRKAEDFGNRLMPAFRTPSKI-PYSDVNIGT------GVAHPPRWTSDSTVAEVTSIQLEFRELS 248 (538)
T ss_dssp HHHHHHHHHC-CHHHHHHHHHHHHHHGGGGCSTTSC-CCSEEETTT------CCEECCTTCSEEEHHHHHSSHHHHHHHH
T ss_pred hhhhHHHhcC-CHHHHHHHHHHHHHHHHhhcCCCCC-Ccceeeecc------cccCCCCcCCCceeccccceeeeHHHHH
Confidence 4455555556 67788888888888887665 5552 432211110 00011122211 23332 2266678
Q ss_pred HHhCcHhHHHHHHHHHHHHHHhC-----CC-----CCCCcccCc-hhh-------HHHHHHHHHHHcC--ChHHHHHHHH
Q psy3913 313 LFWGEEKYLNSCIKCGEVIWEKG-----LL-----KKGPGICHG-VSG-------NGYAFLLLYRLTK--DEQYLHKAYL 372 (423)
Q Consensus 313 ~~~~~~~~~~~a~~~~~~~~~~g-----~~-----~~~~~LChG-~aG-------~~~~ll~l~~~t~--~~~~~~~a~~ 372 (423)
++++|++|.+.++++.+.+|+.. +. ..+-.++.. ..| --.-|++.|-+++ ++.|+++..+
T Consensus 249 ~LTGd~~Y~~~a~r~~~~l~~~~~~~~GL~p~~i~~~tG~~~~~~~~~lGa~~DS~YEYLlK~~il~g~~d~~y~~my~~ 328 (538)
T 1x9d_A 249 RLTGDKKFQEAVEKVTQHIHGLSGKKDGLVPMFINTHSGLFTHLGVFTLGARADSYYEYLLKQWIQGGKQETQLLEDYVE 328 (538)
T ss_dssp HHHCCTHHHHHHHHHHHHHHTCSCCBTTBCCSEEETTTCCEESTTEECSSTTTHHHHHHHHHHHHHTTSCCHHHHHHHHH
T ss_pred HHhCCcHHHHHHHHHHHHHHhcccCCCCCcceEEeCCCCCccCCcceeecCCccHHHHHHHHHHHHcCCchHHHHHHHHH
Confidence 88999999999999999998633 22 011122322 222 2355677888888 7788777766
Q ss_pred HHHHh
Q psy3913 373 FANFM 377 (423)
Q Consensus 373 ~~~~~ 377 (423)
.++-+
T Consensus 329 a~~~i 333 (538)
T 1x9d_A 329 AIEGV 333 (538)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55544
No 38
>1ut9_A Cellulose 1,4-beta-cellobiosidase; hydrolase, glycoside hydrolase, family 9, cellobiohydrolase; 2.1A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 PDB: 1rq5_A*
Probab=74.74 E-value=21 Score=36.07 Aligned_cols=114 Identities=17% Similarity=0.249 Sum_probs=65.1
Q ss_pred cchHHHHHHHHHHHHHccCCCC----------------CCCC--CCccCCCCCcccccccccccccc-Cc---hHHHHHH
Q psy3913 251 PDIEKDIKETVDFLLKLQMPNG----------------NFPA--DLKELYSPTDAKSAANELVHWCH-GA---PGVIYLM 308 (423)
Q Consensus 251 ~~~~~~i~~~~~~l~~~~~~~g----------------~wp~--~~~~~~~~~~~~~~~~~~~~WCh-G~---~Gi~~~l 308 (423)
+.+++.|+=.++|+++.+.+++ .|.. .+++.. ..... .|. |+ .-++-+|
T Consensus 227 ~d~ldeikwg~D~llk~q~~~g~~~~~~g~v~~~~~D~~w~g~~~~Pe~~-------~~~R~--~~~p~t~~~~~~AAal 297 (609)
T 1ut9_A 227 PDILDEARWEIEFFKKMQVTEKEDPSIAGMVHHKIHDFRWTALGMLPHED-------PQPRY--LRPVSTAATLNFAATL 297 (609)
T ss_dssp CHHHHHHHHHHHHHHHHBCCTTTCGGGTTCEECEEEESSCCCSSCCGGGC-------CSBEE--ECCEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhccCCCCcceEEEEecCCCCCcccCCCCCChhhC-------CCcee--ecCCCcHHHHHHHHHH
Confidence 5688889999999999876433 3421 112110 01111 132 22 2344557
Q ss_pred HHHHHHhC--cHhHHHHHHHHHHHHHHh-----CCCCCC----Ccc---cCchhh----HHHHHHHHHHHcCChHHHHHH
Q psy3913 309 AKAYLFWG--EEKYLNSCIKCGEVIWEK-----GLLKKG----PGI---CHGVSG----NGYAFLLLYRLTKDEQYLHKA 370 (423)
Q Consensus 309 ~~~~~~~~--~~~~~~~a~~~~~~~~~~-----g~~~~~----~~L---ChG~aG----~~~~ll~l~~~t~~~~~~~~a 370 (423)
+.++.+++ |+.|-+.+.+.++.+|+. +....+ .+. .-+.+| ...+-..||+.|+|++|++.+
T Consensus 298 Aaas~vfk~~d~~ya~~~L~~A~~~~~fa~~~~~~y~~~~~~~~~~~~~~Y~ss~~~DEl~WAAawLy~ATgd~~Yl~~a 377 (609)
T 1ut9_A 298 AQSARLWKDYDPTFAADCLEKAEIAWQAALKHPDIYAEYTPGSGGPGGGPYNDDYVGDEFYWAACELYVTTGKDEYKNYL 377 (609)
T ss_dssp HHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHCTTCCBCCCCSSSSCBSCCCCBSCCHHHHHHHHHHHHHHHCCHHHHHHH
T ss_pred HHHHHhcccCCHHHHHHHHHHHHHHHHHHHhCcccccccccccCccCCCCCCCCCcccHHHHHHHHHHHHhCCHHHHHHH
Confidence 78888884 677777777777777652 221000 000 112233 355667889999999999888
Q ss_pred HHH
Q psy3913 371 YLF 373 (423)
Q Consensus 371 ~~~ 373 (423)
...
T Consensus 378 ~~~ 380 (609)
T 1ut9_A 378 MNS 380 (609)
T ss_dssp HTS
T ss_pred HHh
Confidence 653
No 39
>1x9d_A Endoplasmic reticulum mannosyl-oligosaccharide 1, 2-alpha-mannosidase; substrate analogue, glycosyl hydrolase; HET: SMD; 1.41A {Homo sapiens} SCOP: a.102.2.1 PDB: 1fo3_A* 1fo2_A* 1fmi_A
Probab=74.40 E-value=6.7 Score=38.86 Aligned_cols=74 Identities=19% Similarity=0.234 Sum_probs=51.0
Q ss_pred HHHHHHHHHHhCcHhHHHHHHHHHHHHHH-----hCCCCCCCcccCc------------hhhH---HHHHHHHHHHcCCh
Q psy3913 305 IYLMAKAYLFWGEEKYLNSCIKCGEVIWE-----KGLLKKGPGICHG------------VSGN---GYAFLLLYRLTKDE 364 (423)
Q Consensus 305 ~~~l~~~~~~~~~~~~~~~a~~~~~~~~~-----~g~~~~~~~LChG------------~aG~---~~~ll~l~~~t~~~ 364 (423)
+=-|+.||.+++++.+++.|...++.+.. .|++.....+=+| +|+. ..=|.+|+++|||+
T Consensus 175 LGGLLSAy~Lsgd~~lL~kA~dLadrLlpAFdTptgiP~~~vnl~~g~~~~~~~~~~s~lAe~GSl~LEF~~LS~LTGd~ 254 (538)
T 1x9d_A 175 LGGLLSAYHLSGDSLFLRKAEDFGNRLMPAFRTPSKIPYSDVNIGTGVAHPPRWTSDSTVAEVTSIQLEFRELSRLTGDK 254 (538)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHHHHHGGGGCSTTSCCCSEEETTTCCEECCTTCSEEEHHHHHSSHHHHHHHHHHHCCT
T ss_pred hhhhhhHHHhcCCHHHHHHHHHHHHHHHHhhcCCCCCCcceeeecccccCCCCcCCCceeccccceeeeHHHHHHHhCCc
Confidence 33477888889999999999999988742 3332110111111 3333 34478889999999
Q ss_pred HHHHHHHHHHHHhh
Q psy3913 365 QYLHKAYLFANFML 378 (423)
Q Consensus 365 ~~~~~a~~~~~~~~ 378 (423)
+|.+.|+++.+.+.
T Consensus 255 ~Y~~~a~r~~~~l~ 268 (538)
T 1x9d_A 255 KFQEAVEKVTQHIH 268 (538)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999888764
No 40
>3gzk_A Cellulase; fold from GH9 from CAZY database, glycosidase, hydrolase; 1.80A {Alicyclobacillus acidocaldarius subsp} PDB: 3ez8_A 3h2w_A* 3h3k_A* 3rx5_A* 3rx7_A* 3rx8_A*
Probab=73.97 E-value=36 Score=33.73 Aligned_cols=117 Identities=20% Similarity=0.203 Sum_probs=62.7
Q ss_pred cchHHHHHHHHHHHHHccC-CCC---------CCCCC--CccCCCCCcccccccccc-cccc-CchHHHHHHHHHHHHhC
Q psy3913 251 PDIEKDIKETVDFLLKLQM-PNG---------NFPAD--LKELYSPTDAKSAANELV-HWCH-GAPGVIYLMAKAYLFWG 316 (423)
Q Consensus 251 ~~~~~~i~~~~~~l~~~~~-~~g---------~wp~~--~~~~~~~~~~~~~~~~~~-~WCh-G~~Gi~~~l~~~~~~~~ 316 (423)
+.+++.|+=.++|+++.+. +.| .|+.. +++.. ..+..+ .-+- .+.-.+-+|+.++++++
T Consensus 188 ~d~ldeikwg~D~llk~~~~~~g~~y~~v~~~~w~g~~~~Pe~~-------~~~R~~~~~~t~~~~~~AAalA~as~vf~ 260 (537)
T 3gzk_A 188 PPALEVAREEIAWLLTMQDPATGGVYHKVTTPSFPPLDTRPEDD-------DAPLVLSPISYAATATFCAAMAHAALVYR 260 (537)
T ss_dssp CHHHHHHHHHHHHHHHTBCTTTCCBBSEEECSSCCCTTCCGGGC-------CSCEEECCBCHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhcccCCCCeEEEEecCCCcCCCCcCcccC-------CCcceEeecCCcHHHHHHHHHHHHHHhhc
Confidence 5688899999999999775 222 25321 11110 111111 0111 12334466888888886
Q ss_pred --cHhHHHHHHHHHHHHHHh-----CCC-CCCCcccCch---hh----HHHHHHHHHHHcCChHHHHHHHHHH
Q psy3913 317 --EEKYLNSCIKCGEVIWEK-----GLL-KKGPGICHGV---SG----NGYAFLLLYRLTKDEQYLHKAYLFA 374 (423)
Q Consensus 317 --~~~~~~~a~~~~~~~~~~-----g~~-~~~~~LChG~---aG----~~~~ll~l~~~t~~~~~~~~a~~~~ 374 (423)
|+.|-+.+.+.++.+|+. +.. ....+...|. +| ...+...||+.|+|++|++.+....
T Consensus 261 ~~D~~yA~~~L~~A~~~~~fa~~~~~~~~~~~~~~~~~~Y~~~~~~Del~wAA~~Ly~aTgd~~Yl~~a~~~~ 333 (537)
T 3gzk_A 261 PFDPALSSCCADAARRAYAWLGAHEMQPFHNPDGILTGEYGDAELRDELLWASCALLRMTGDSAWARVCEPLL 333 (537)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHTSCCCCCCCCTTCCSCCCCCSCCHHHHHHHHHHHHHHHCCGGGHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHHHHHHHhcccccccCCcccccCCcCCCccchHHHHHHHHHHHHhCCHHHHHHHHHhh
Confidence 455555555555555432 110 0011111111 12 4677788999999999999887643
No 41
>1tf4_A T. fusca endo/EXO-cellulase E4 catalytic domain and cellulose-binding domain; glycosyl hydrolase, cellulose degradation; 1.90A {Thermobifida fusca} SCOP: a.102.1.2 b.2.2.2 PDB: 1js4_A 3tf4_A* 4tf4_A*
Probab=73.07 E-value=8.2 Score=39.03 Aligned_cols=118 Identities=18% Similarity=0.255 Sum_probs=65.5
Q ss_pred cchHHHHHHHHHHHHHccCCC---------C-----CCCCCCccCCCCCcccccccccccc-ccCch---HHHHHHHHHH
Q psy3913 251 PDIEKDIKETVDFLLKLQMPN---------G-----NFPADLKELYSPTDAKSAANELVHW-CHGAP---GVIYLMAKAY 312 (423)
Q Consensus 251 ~~~~~~i~~~~~~l~~~~~~~---------g-----~wp~~~~~~~~~~~~~~~~~~~~~W-ChG~~---Gi~~~l~~~~ 312 (423)
+.+++.|+=.++|+++.+... | .|... +.... .+....+.. |=|+. -.+-+|+.++
T Consensus 91 ~d~ldeikwg~Dyllk~~~~~~~~y~qVGdg~~DH~~w~~p-e~m~~-----~r~~y~~~~~~pgsd~a~~~AAAlAaAS 164 (605)
T 1tf4_A 91 PYLKDNLRWVNDYFIKAHPSPNVLYVQVGDGDADHKWWGPA-EVMPM-----ERPSFKVDPSCPGSDVAAETAAAMAASS 164 (605)
T ss_dssp HHHHHHHHHHHHHHHHTCSBTTBEEEEESCHHHHHHCCSCG-GGCCS-----CCCEEEEBTTBCCHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHhccCCCeEEEEeCCCCcCccccCCh-hhCCC-----CCceeEecCCCCcchHHHHHHHHHHHHH
Confidence 568888888999999976422 2 24211 11100 011111111 22322 3456688888
Q ss_pred HHhC--cHhHHHHHHHHHHHHHHhCCC-CCCCcccCc------h-hh----HHHHHHHHHHHcCChHHHHHHHHHH
Q psy3913 313 LFWG--EEKYLNSCIKCGEVIWEKGLL-KKGPGICHG------V-SG----NGYAFLLLYRLTKDEQYLHKAYLFA 374 (423)
Q Consensus 313 ~~~~--~~~~~~~a~~~~~~~~~~g~~-~~~~~LChG------~-aG----~~~~ll~l~~~t~~~~~~~~a~~~~ 374 (423)
++++ |+.|-+.+.+.++.+|+...- +..+.-+-. . +| ...+-..||+.|+|++|++.+....
T Consensus 165 ~vfk~~D~~yA~~~L~~Ak~~~~fA~~~~g~y~~~~~~~~~Y~s~s~~~DEl~WAAawLy~ATgd~~Yl~~a~~~~ 240 (605)
T 1tf4_A 165 IVFADDDPAYAATLVQHAKQLYTFADTYRGVYSDCVPAGAFYNSWSGYQDELVWGAYWLYKATGDDSYLAKAEYEY 240 (605)
T ss_dssp HHHTTTCHHHHHHHHHHHHHHHHHHHHSCCCGGGTSTTHHHHCCSSCSHHHHHHHHHHHHHHHCCHHHHHHHHHHG
T ss_pred hhccccCHHHHHHHHHHHHHHHHHHHHcCCCcCCCCCccccccCCCCCchHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 8886 777877777777777652210 000111111 0 12 2556678899999999999887644
No 42
>3a0o_A Oligo alginate lyase; alpha/alpha ballel+anti-parallel beta sheet; 2.11A {Agrobacterium tumefaciens} PDB: 3afl_A*
Probab=72.95 E-value=27 Score=36.35 Aligned_cols=56 Identities=11% Similarity=0.099 Sum_probs=30.8
Q ss_pred HHHHHHHHHHhCChhHHHHHHHHHHHHHHHHhhccccCCC-C----ccccccchhHHHHHHHHHHHhCc
Q psy3913 122 HAVLGVFYNAVGDKERSQCHFDMYTKLATHIKAIDYVKFG-G----DEFLVGRAGYLAGIIWAERQLGR 185 (423)
Q Consensus 122 ~~l~~~l~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~-~----~d~l~G~aG~l~~ll~l~~~~~~ 185 (423)
+..++.++..+|++++++.+.+.+.+.. .|.... . .|+ +.+..+.++...+..+.+
T Consensus 212 l~~la~ay~ltgd~kya~~a~~~L~~~~------~w~p~~~~~~~~~dl--~~a~~~~~~a~aYD~l~~ 272 (776)
T 3a0o_A 212 IRHLAIAGRVLGRDDLLDASRKWLLAVA------AWDTKGATSRAYNDE--AGFRVVVALAWGYDWLYD 272 (776)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHH------TSCTTSTTSTTTCHH--HHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHh------CcCCCCccccccccH--HHHHHHHHHHHHHHHhHh
Confidence 3445666788999888877766543322 243110 1 122 345555666666666654
No 43
>1hcu_A Alpha-1,2-mannosidase; glycosylation, glycosyl hydrolase; HET: NAG; 2.37A {Trichoderma reesei} SCOP: a.102.2.1
Probab=71.53 E-value=25 Score=34.52 Aligned_cols=116 Identities=11% Similarity=0.058 Sum_probs=64.9
Q ss_pred chHHHHHHHHHHHHHccC-CCCCCCCCCccCCCCCcccccccccccccc---CchHHH---HHHHHHHHHhCcHhHHHHH
Q psy3913 252 DIEKDIKETVDFLLKLQM-PNGNFPADLKELYSPTDAKSAANELVHWCH---GAPGVI---YLMAKAYLFWGEEKYLNSC 324 (423)
Q Consensus 252 ~~~~~i~~~~~~l~~~~~-~~g~wp~~~~~~~~~~~~~~~~~~~~~WCh---G~~Gi~---~~l~~~~~~~~~~~~~~~a 324 (423)
.+++.+....+.|+..++ ++|. |...-+... ....|=+ ..+++. .=+.++.++++|++|.+.|
T Consensus 132 ~lL~kA~dLadrLlpAFdTptgi-P~~~vnl~~---------~~~~~~~~~~~~Ae~gsl~LEF~~LS~lTGd~~Y~~~a 201 (503)
T 1hcu_A 132 SLLRQAQTLANGLKVAFTTPSGV-PDPTVFFNP---------TVRRSGASSNNVAEIGSLVLEWTRLSDLTGNPQYAQLA 201 (503)
T ss_dssp HHHHHHHHHHHHHGGGGCSSSSC-CCSEEECSS---------SCEECCCSEEEHHHHTTSHHHHHHHHHHHSCTHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhcCCCCC-Ccceeeccc---------CCCCCCCCccccccccceeeehHHHHHHhCChHHHHHH
Confidence 566677777777777665 5552 432211110 0011111 123332 2266778889999999999
Q ss_pred HHHHHHHHHh--------CCC-----CCCCcccCchhh-------HHHHHHHHHHHcCCh--HHHHHHHHHHHHh
Q psy3913 325 IKCGEVIWEK--------GLL-----KKGPGICHGVSG-------NGYAFLLLYRLTKDE--QYLHKAYLFANFM 377 (423)
Q Consensus 325 ~~~~~~~~~~--------g~~-----~~~~~LChG~aG-------~~~~ll~l~~~t~~~--~~~~~a~~~~~~~ 377 (423)
+++.+.+|+. |+. ..+-.++.+..| --.-|++.+.++++. .|+++..+.++-+
T Consensus 202 ~~~~~~l~~~~~~~~~~~GL~p~~i~~~tg~~~~~~~~~Ga~~DS~YEYLlK~~il~g~~~~~y~~m~~~a~~~i 276 (503)
T 1hcu_A 202 QKGESYLLNPKGSPEAWPGLIGTFVSTSNGTFQDSSGSWSGLMDSFYEYLIKMYLYDPVAFAHYKDRWVLGADST 276 (503)
T ss_dssp HHHHHHHHSCCBSCCSBTTBCCSEEETTTCCBCCCEECSSTTTHHHHHHHHHHHHHCTTTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhcccCCCCCceeeEEeCCCCcccCCeeeecCCCccHHHHHHHHHHHcCCchHHHHHHHHHHHHHH
Confidence 9999999863 221 011123333332 235678888888864 6776665554443
No 44
>1ia6_A Cellulase CEL9M; cellullase, alpha barrel, hydrolase; 1.80A {Clostridium cellulolyticum} SCOP: a.102.1.2 PDB: 1ia7_A*
Probab=70.44 E-value=14 Score=35.74 Aligned_cols=72 Identities=18% Similarity=0.302 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHhC--cHhHHHHHHHHHHHHHHhCCC---CCCCcccCchhh----HHHHHHHHHHHcCChHHHHHHHHH
Q psy3913 303 GVIYLMAKAYLFWG--EEKYLNSCIKCGEVIWEKGLL---KKGPGICHGVSG----NGYAFLLLYRLTKDEQYLHKAYLF 373 (423)
Q Consensus 303 Gi~~~l~~~~~~~~--~~~~~~~a~~~~~~~~~~g~~---~~~~~LChG~aG----~~~~ll~l~~~t~~~~~~~~a~~~ 373 (423)
-.+-+|+.++++++ |+.|-+.+.+.++.+|+...- ....+=.-+.+| ...+-..||+.|+|++|++.+...
T Consensus 157 ~~AAalAaas~vfk~~D~~yA~~~L~~A~~~~~fa~~~~g~~~~~~~Y~ss~~~DE~~WAAa~Ly~aTgd~~Yl~~a~~~ 236 (441)
T 1ia6_A 157 ETSAALTLMYLNYKNIDSAYATKCLNAAKELYAMGKANQGVGNGQSFYQATSFGDDLAWAATWLYTATNDSTYITDAEQF 236 (441)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHSCSCCCCTTTSCCCCSHHHHHHHHHHHHHHHCCTHHHHHHHHH
T ss_pred HHHHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 34466788888885 677777777777777652210 011111112344 455667889999999999988764
Q ss_pred H
Q psy3913 374 A 374 (423)
Q Consensus 374 ~ 374 (423)
.
T Consensus 237 ~ 237 (441)
T 1ia6_A 237 I 237 (441)
T ss_dssp T
T ss_pred H
Confidence 3
No 45
>1dl2_A Class I alpha-1,2-mannosidase; alpha-alpha helix barrel, hydrolase; HET: NAG NDG BMA MAN; 1.54A {Saccharomyces cerevisiae} SCOP: a.102.2.1 PDB: 1g6i_A*
Probab=65.89 E-value=14 Score=36.41 Aligned_cols=132 Identities=14% Similarity=0.054 Sum_probs=77.0
Q ss_pred CcccCcHHHHHHHHHHHHHcCccccccccCCCCcc-eeec-CC-cccccccc---hHHHH---HHHhccccccCCCcchH
Q psy3913 184 GRQIMSLEDRTAICNALILSGRSYSQANNLRCPLM-YHYY-GT-EYLGACHG---LSGIL---QVLLCEKNYVKSNPDIE 254 (423)
Q Consensus 184 ~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~-~~~G~aHG---~~GI~---~~Ll~~~~~~~~~~~~~ 254 (423)
+++.++ +.+.++++.++..-.. . ....|.. +++. +. ....+..| .++++ +=+..+.+.++ ++.+.
T Consensus 122 ~d~~lL-~kA~dLadrLlpAFd~--T--ptgiP~~~vnl~~g~~~~~~~~~~~s~~Ae~gSl~LEF~~LS~LTG-d~~Y~ 195 (511)
T 1dl2_A 122 NKTVYL-NKAIDLGDRLALAFLS--T--QTGIPYSSINLHSGQAVKNHADGGASSTAEFTTLQMEFKYLAYLTG-NRTYW 195 (511)
T ss_dssp CHHHHH-HHHHHHHHHHHGGGGS--S--SSSCCCSEEETTTCCEECCSSGGGCEEHHHHSSCHHHHHHHHHHHT-CHHHH
T ss_pred CcHHHH-HHHHHHHHHHHHhhcC--C--CCCCCCceeecccCCCCCCCCCCcccccccccceeeeHHHHHHHHC-ChHHH
Confidence 443333 4667888888854210 1 1122321 1221 11 12234333 34443 44555677888 79999
Q ss_pred HHHHHHHHHHHHcc----CCCCCCCCCCccCCCCCccccccccccccccCchHH-------HHHHHHHHHHhCcHhHHHH
Q psy3913 255 KDIKETVDFLLKLQ----MPNGNFPADLKELYSPTDAKSAANELVHWCHGAPGV-------IYLMAKAYLFWGEEKYLNS 323 (423)
Q Consensus 255 ~~i~~~~~~l~~~~----~~~g~wp~~~~~~~~~~~~~~~~~~~~~WChG~~Gi-------~~~l~~~~~~~~~~~~~~~ 323 (423)
+.++++.+.+.+.+ ...|.||..+.. ..-.|+....|+ -.-|++.+..++++.|++.
T Consensus 196 ~~a~r~~~~l~~~~~~~~~~~GL~p~~i~~------------~tg~~~~~~~~lGa~~DS~YEYLlK~~il~~d~~y~~m 263 (511)
T 1dl2_A 196 ELVERVYEPLYKNNDLLNTYDGLVPIYTFP------------DTGKFGASTIRFGSRGDSFYEYLLKQYLLTHETLYYDL 263 (511)
T ss_dssp HHHHTTHHHHHHHHTHHHHHTTCCBSEECT------------TTCCBCSCCBCSSTTTHHHHHHHHHHHHHHCCHHHHHH
T ss_pred HHHHHHHHHHHhcccccCCCCCCcceEEcC------------CCCCccCCeeeecCCCCcHHHHHHHHHHhcCCHHHHHH
Confidence 99999999888866 357888865432 112344333332 3557888888899999888
Q ss_pred HHHHHHHHHH
Q psy3913 324 CIKCGEVIWE 333 (423)
Q Consensus 324 a~~~~~~~~~ 333 (423)
-.++.+.+.+
T Consensus 264 ~~~a~~~i~~ 273 (511)
T 1dl2_A 264 YRKSMEGMKK 273 (511)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8888877754
No 46
>1gxm_A Pectate lyase; mechanism, elimination; 1.32A {Cellvibrio cellulosa} SCOP: a.102.5.1 PDB: 1gxn_A 1gxo_A*
Probab=64.11 E-value=89 Score=28.70 Aligned_cols=118 Identities=16% Similarity=0.173 Sum_probs=72.7
Q ss_pred HHHHHHHccCCCCCCCCCCccCCCCCccccccccccc-cccCchHHHHHHHHHHHHhCcHhHHHHHHHHHHHHHHh----
Q psy3913 260 TVDFLLKLQMPNGNFPADLKELYSPTDAKSAANELVH-WCHGAPGVIYLMAKAYLFWGEEKYLNSCIKCGEVIWEK---- 334 (423)
Q Consensus 260 ~~~~l~~~~~~~g~wp~~~~~~~~~~~~~~~~~~~~~-WChG~~Gi~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~---- 334 (423)
+.+.++..|.++|.||....-..... ......... =+..++-++.+|.+++...+++.+.+++.++++.+..-
T Consensus 36 ~Ad~~l~~Q~~~GGW~kn~d~~~~~~--~~~~~~~~t~DnddTa~vl~~Larv~~~~~~~~y~~Ai~Rgl~wlL~mQ~~n 113 (332)
T 1gxm_A 36 RADVVLSYQQNNGGWPKNLDYNSVGN--GGGGNESGTIDNGATITEMVFLAEVYKSGGNTKYRDAVRKAANFLVNSQYST 113 (332)
T ss_dssp GHHHHHHTCCTTSCCCSCCCTTTCCC--CCCCCSCEECGGGTTHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCTT
T ss_pred HHHHHHHcCcCCCCCCcceecccccc--cCCCCCCCCccCccHHHHHHHHHHHhccccchHHHHHHHHHHHHHHhccCCC
Confidence 36788888888999986432111000 000000000 15567788888999988888999999999999988541
Q ss_pred -CCC---------CCCCcccCchhhHHHHHHHHHHHcC---------C---hHHHHHHHHHHHHhhc
Q psy3913 335 -GLL---------KKGPGICHGVSGNGYAFLLLYRLTK---------D---EQYLHKAYLFANFMLS 379 (423)
Q Consensus 335 -g~~---------~~~~~LChG~aG~~~~ll~l~~~t~---------~---~~~~~~a~~~~~~~~~ 379 (423)
|+. .....+|..+.+...-+|....... + ++....+.+-+++++.
T Consensus 114 GGWpqFdpd~~~Yl~~IpFnDDvtarvLelL~~~~~~~~~~~~~~~~~~~~~~~~~av~Rgid~Llk 180 (332)
T 1gxm_A 114 GALPQFYPLKGGYSDHATFNDNGMAYALTVLDFAANKRAPFDTDVFSDNDRTRFKTAVTKGTDYILK 180 (332)
T ss_dssp SCCBSEESCCSGGGGSEECGGGHHHHHHHHHHHHHTTCTTSCSTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCccccCCCcccccccCCcchHHHHHHHHHHHHHHhccCCccccccccchhhhhHHHHHHHHHHHHH
Confidence 111 1245788888887777766654211 1 3444555667777763
No 47
>2xfg_A Endoglucanase 1; hydrolase-sugar binding protein complex, family-9 glycoside hydrolase, hydrolase, sugar binding protein; 1.68A {Clostridium thermocellum}
Probab=62.91 E-value=16 Score=35.50 Aligned_cols=72 Identities=24% Similarity=0.318 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHHhC--cHhHHHHHHHHHHHHHHh-----CCCC-CCCcccCch-hh----HHHHHHHHHHHcCChHHHHH
Q psy3913 303 GVIYLMAKAYLFWG--EEKYLNSCIKCGEVIWEK-----GLLK-KGPGICHGV-SG----NGYAFLLLYRLTKDEQYLHK 369 (423)
Q Consensus 303 Gi~~~l~~~~~~~~--~~~~~~~a~~~~~~~~~~-----g~~~-~~~~LChG~-aG----~~~~ll~l~~~t~~~~~~~~ 369 (423)
-.+-+|+.++++++ |+.|-+.+.+.++.+|+. +... ...+=.-+. +| ...+-..||+.|+|++|++.
T Consensus 176 e~AAAlAaAS~vfk~~D~~yA~~~L~~Ak~l~~fA~~~~~~~~~~~~~~~Y~s~s~~~DEl~WAAawLy~ATgd~~Yl~~ 255 (466)
T 2xfg_A 176 ETSAALAIASIIFKKVDGEYSKECLKHAKELFEFADTTKSDDGYTAANGFYNSWSGFYDELSWAAVWLYLATNDSSYLDK 255 (466)
T ss_dssp HHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHHHHHHHHCCCTTCCTTTTTSCCSSCSHHHHHHHHHHHHHHHCCHHHHHH
T ss_pred HHHHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHhcCCcCCCCccccccCCCCCCchHHHHHHHHHHHHhCCHHHHHH
Confidence 34456778888885 677777777777777642 2210 001111112 33 35566788999999999988
Q ss_pred HHHHH
Q psy3913 370 AYLFA 374 (423)
Q Consensus 370 a~~~~ 374 (423)
+....
T Consensus 256 a~~~~ 260 (466)
T 2xfg_A 256 AESYS 260 (466)
T ss_dssp HHHTT
T ss_pred HHHHH
Confidence 87643
No 48
>2sqc_A Squalene-hopene cyclase; isomerase, triterpene cyclase, monotopic membrane protein, QW-sequence, repeat; HET: C8E; 2.00A {Alicyclobacillus acidocaldarius} SCOP: a.102.4.2 a.102.4.2 PDB: 3sqc_A 1ump_A* 1h35_A* 1h36_A* 1h37_A* 1h39_A* 1h3a_A* 1h3b_A* 1h3c_A* 1o6h_A* 1o6q_A* 1gsz_A* 1o79_A* 1sqc_A* 1o6r_A*
Probab=59.25 E-value=41 Score=34.06 Aligned_cols=105 Identities=17% Similarity=0.223 Sum_probs=58.8
Q ss_pred CcchHHHHHHHHHHHHHccCCCCCCCCCCccCCCCCccccccccccccccCchHHHHHHHHHHHHhCcHhHHHHHHHHHH
Q psy3913 250 NPDIEKDIKETVDFLLKLQMPNGNFPADLKELYSPTDAKSAANELVHWCHGAPGVIYLMAKAYLFWGEEKYLNSCIKCGE 329 (423)
Q Consensus 250 ~~~~~~~i~~~~~~l~~~~~~~g~wp~~~~~~~~~~~~~~~~~~~~~WChG~~Gi~~~l~~~~~~~~~~~~~~~a~~~~~ 329 (423)
.+...+.++++++++.+.|.++|.|+-..+ .+ +--++|.+.++ .+++...- +..+++.+
T Consensus 8 ~~~~~~~~~~~~~~~~~~q~~dG~w~~~~~-----------~~-----~~~~~~~v~~~----~~~~~~~~-~~~~~~~~ 66 (631)
T 2sqc_A 8 APAYARTLDRAVEYLLSCQKDEGYWWGPLL-----------SN-----VTMEAEYVLLC----HILDRVDR-DRMEKIRR 66 (631)
T ss_dssp CCHHHHHHHHHHHHHHHHCCTTSCCCCCEE-----------CC-----THHHHHHHHHH----HHTTCCCH-HHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHhcCCCCcccccCC-----------Cc-----chhhHHHHHHH----HHhCCCCH-HHHHHHHH
Confidence 356777899999999999999999984322 12 23355555333 22332211 45566666
Q ss_pred HHHHhCCCCCCCcccCchhhH------HHHHHHHHHHcCChHHHHHHHHHHH
Q psy3913 330 VIWEKGLLKKGPGICHGVSGN------GYAFLLLYRLTKDEQYLHKAYLFAN 375 (423)
Q Consensus 330 ~~~~~g~~~~~~~LChG~aG~------~~~ll~l~~~t~~~~~~~~a~~~~~ 375 (423)
.+.++--..-+-+++++-.|. .|+.|++.-...+.....+|++++.
T Consensus 67 yl~~~Q~~dGgW~~~~~~~~~~~~t~~~y~aLrllg~~~~~~~~~~ar~~i~ 118 (631)
T 2sqc_A 67 YLLHEQREDGTWALYPGGPPDLDTTIEAYVALKYIGMSRDEEPMQKALRFIQ 118 (631)
T ss_dssp HHHHHSCTTSCCCSSTTCCCCHHHHHHHHHHHHHHTCCTTSHHHHHHHHHHH
T ss_pred HHHHhcCCCCCccCCCCCCcchHHHHHHHHHHHhcCCCCChHHHHHHHHHHH
Confidence 666543222244677775543 3444444444444445666665543
No 49
>1v5d_A Chitosanase; chitosan degradation, hydrolase, glycosil hydrolase, family 8; HET: PIN; 1.50A {Bacillus SP} SCOP: a.102.1.2 PDB: 1v5c_A*
Probab=59.00 E-value=91 Score=29.35 Aligned_cols=77 Identities=17% Similarity=0.200 Sum_probs=50.3
Q ss_pred CchHHHHHHHHHHHHhCcH---hHHHHHHHHHHHHHHhCCCCCCCcccCch----hh--------HHHHHHHHHHHcCCh
Q psy3913 300 GAPGVIYLMAKAYLFWGEE---KYLNSCIKCGEVIWEKGLLKKGPGICHGV----SG--------NGYAFLLLYRLTKDE 364 (423)
Q Consensus 300 G~~Gi~~~l~~~~~~~~~~---~~~~~a~~~~~~~~~~g~~~~~~~LChG~----aG--------~~~~ll~l~~~t~~~ 364 (423)
|+.=|+++|+.|.+..+++ .|...|.++++.+++........-+--|. .+ ....|-.+++++++.
T Consensus 136 gDl~IA~ALl~A~~~Wg~~g~~~Y~~~A~~il~~i~~~~~~~~~~~l~~g~~~~~~~~~~npSY~~p~~l~~f~~~~~~~ 215 (386)
T 1v5d_A 136 GDLDIAYSLLLAHKQWGSNGTVNYLKEAQDMITKGIKASNVTNNNQLNLGDWDSKSSLDTRPSDWMMSHLRAFYEFTGDK 215 (386)
T ss_dssp HHHHHHHHHHHHHHHHCSSSSSCHHHHHHHHHHHTHHHHHBCTTSSBCSSTTSCTTCCCBCGGGCCHHHHHHHHHHHCCT
T ss_pred HHHHHHHHHHHHHHHcCCCchHhHHHHHHHHHHHHHHhcccCCCCeeeecccCCCCCCeechhhccHHHHHHHHHhcCCC
Confidence 4455788899999999887 89999999998887643211110111010 11 126677788889888
Q ss_pred HHHHHHHHHHHH
Q psy3913 365 QYLHKAYLFANF 376 (423)
Q Consensus 365 ~~~~~a~~~~~~ 376 (423)
.|.+.+..-...
T Consensus 216 ~W~~v~~~~~~~ 227 (386)
T 1v5d_A 216 TWLTVINNLYDV 227 (386)
T ss_dssp HHHHHHHHHHHH
T ss_pred cHHHHHHHHHHH
Confidence 887777655444
No 50
>2ri9_A Mannosyl-oligosaccharide alpha-1,2-mannosidase; alternative conformations, modulation of activity, glycoprot glycosidase, hydrolase; HET: NAG NDG MAN MMA; 1.95A {Penicillium citrinum} SCOP: a.102.2.1 PDB: 2ri8_A* 1kkt_A* 1kre_A* 1krf_A*
Probab=58.81 E-value=1.2e+02 Score=29.47 Aligned_cols=119 Identities=14% Similarity=0.117 Sum_probs=65.5
Q ss_pred cchHHHHHHHHHHHHHccC-CCCCCCCCCccCCCCCccccccccccccccCchHHHH---HHHHHHHHhCcHhHHHHHHH
Q psy3913 251 PDIEKDIKETVDFLLKLQM-PNGNFPADLKELYSPTDAKSAANELVHWCHGAPGVIY---LMAKAYLFWGEEKYLNSCIK 326 (423)
Q Consensus 251 ~~~~~~i~~~~~~l~~~~~-~~g~wp~~~~~~~~~~~~~~~~~~~~~WChG~~Gi~~---~l~~~~~~~~~~~~~~~a~~ 326 (423)
+.+++.+....+.|+..++ ++| -|...-+.... ...... |...+++.. =+.++.++++|++|.+.+++
T Consensus 118 ~~lL~kA~dLadrLlpAF~Tptg-iP~~~vnl~~~----~~~~~~---~~~~Ae~gsl~LEF~~LS~lTGd~~Y~~~a~~ 189 (475)
T 2ri9_A 118 DGLLDQSRNLADVLKFAFDTPSG-VPYNNINITSH----GNDGAT---TNGLAVTGTLVLEWTRLSDLTGDEEYAKLSQK 189 (475)
T ss_dssp HHHHHHHHHHHHHHGGGGCSSSS-CCCSEECTTTC----CBCCCS---EEEHHHHHSCHHHHHHHHHHHSCTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhcCCCC-CCCceeecccC----CCcCCC---ccchhccccceeeHHHHHHHhCCHHHHHHHHH
Confidence 3566677777777777665 555 34322211100 000000 122344332 26667888999999999999
Q ss_pred HHHHHHHh---------CCC-----CCCCcccCchhh-------HHHHHHHHHHHcCCh--HHHHHHHHHHHHh
Q psy3913 327 CGEVIWEK---------GLL-----KKGPGICHGVSG-------NGYAFLLLYRLTKDE--QYLHKAYLFANFM 377 (423)
Q Consensus 327 ~~~~~~~~---------g~~-----~~~~~LChG~aG-------~~~~ll~l~~~t~~~--~~~~~a~~~~~~~ 377 (423)
+.+.+|+. |+. ..+-.++.+..| --.-|++.+.++++. .|+++..+.++-+
T Consensus 190 ~~~~l~~~~~~~~~~~~GL~p~~i~~~tg~~~~~~~~~Ga~~DS~YEYLlK~~il~g~~~~~~~~m~~~a~~~i 263 (475)
T 2ri9_A 190 AESYLLKPQPSSSEPFPGLVGSSININDGQFADSRVSWNGGDDSFYEYLIKMYVYDPKRFETYKDRWVLAAEST 263 (475)
T ss_dssp HHHHHHSCSSGGGCSBTTBCCSEEETTTCCBCCCCBCSSTTTHHHHHHHHHHHHHCTTTTHHHHHHHHHHHHHH
T ss_pred HHHHHHhhccccccCCCCCcceEEeCCCCcccCCceeecCCcchHHHHHHHHHHHcCCchHHHHHHHHHHHHHH
Confidence 99999853 222 011122222222 335678888888864 6776665555443
No 51
>1g87_A Endocellulase 9G; endoglucanase, cellulose binding domain, (ALPH 6-helix barrel, beta barrel, hydrolase; 1.60A {Clostridium cellulolyticum} SCOP: a.102.1.2 b.2.2.2 PDB: 1ga2_A* 1k72_A* 1kfg_A*
Probab=58.70 E-value=26 Score=35.41 Aligned_cols=71 Identities=21% Similarity=0.302 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHhC--cHhHHHHHHHHHHHHHHh-----CCCC-CCCcccCchhh----HHHHHHHHHHHcCChHHHHHHH
Q psy3913 304 VIYLMAKAYLFWG--EEKYLNSCIKCGEVIWEK-----GLLK-KGPGICHGVSG----NGYAFLLLYRLTKDEQYLHKAY 371 (423)
Q Consensus 304 i~~~l~~~~~~~~--~~~~~~~a~~~~~~~~~~-----g~~~-~~~~LChG~aG----~~~~ll~l~~~t~~~~~~~~a~ 371 (423)
.+-+|+.++++++ |+.|-+.+.+.++.+|+. +... ...+=.-+.+| ...+-..||+.|+|++|++.+.
T Consensus 156 ~AAAlAaAS~vfk~~D~~yA~~~L~~Ak~l~~fA~~~~~~~~~~~~~~~Y~ss~~~DEl~WAAawLy~ATgd~~Yl~~a~ 235 (614)
T 1g87_A 156 TAASLASAAVVFKSSDPTYAEKCISHAKNLFDMADKAKSDAGYTAASGYYSSSSFYDDLSWAAVWLYLATNDSTYLDKAE 235 (614)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHCCCTTCCTTTTTSCCSCSHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_pred HHHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHHcCCCCCCCcCcCCcCCCCchhHHHHHHHHHHHHhCCHHHHHHHH
Confidence 4566778888885 677777777677766642 2110 00111112233 3566678899999999999887
Q ss_pred HHH
Q psy3913 372 LFA 374 (423)
Q Consensus 372 ~~~ 374 (423)
...
T Consensus 236 ~~~ 238 (614)
T 1g87_A 236 SYV 238 (614)
T ss_dssp HTG
T ss_pred HHH
Confidence 643
No 52
>1hcu_A Alpha-1,2-mannosidase; glycosylation, glycosyl hydrolase; HET: NAG; 2.37A {Trichoderma reesei} SCOP: a.102.2.1
Probab=57.54 E-value=54 Score=32.14 Aligned_cols=83 Identities=11% Similarity=0.048 Sum_probs=55.2
Q ss_pred HHHhccccccCCCcchHHHHHHHHHHHHHccC----CCCCCCCCCccCCCCCccccccccccccccCchHH-------HH
Q psy3913 238 QVLLCEKNYVKSNPDIEKDIKETVDFLLKLQM----PNGNFPADLKELYSPTDAKSAANELVHWCHGAPGV-------IY 306 (423)
Q Consensus 238 ~~Ll~~~~~~~~~~~~~~~i~~~~~~l~~~~~----~~g~wp~~~~~~~~~~~~~~~~~~~~~WChG~~Gi-------~~ 306 (423)
+=+..+.+.++ ++.+.+.++++.+.+.+.+. ..|.||..+.. ....|+.+..|+ -.
T Consensus 183 LEF~~LS~lTG-d~~Y~~~a~~~~~~l~~~~~~~~~~~GL~p~~i~~------------~tg~~~~~~~~~Ga~~DS~YE 249 (503)
T 1hcu_A 183 LEWTRLSDLTG-NPQYAQLAQKGESYLLNPKGSPEAWPGLIGTFVST------------SNGTFQDSSGSWSGLMDSFYE 249 (503)
T ss_dssp HHHHHHHHHHS-CTHHHHHHHHHHHHHHSCCBSCCSBTTBCCSEEET------------TTCCBCCCEECSSTTTHHHHH
T ss_pred eehHHHHHHhC-ChHHHHHHHHHHHHHHhhhcccCCCCCceeeEEeC------------CCCcccCCeeeecCCCccHHH
Confidence 44555677888 89999999999999988653 46788865432 112355444433 25
Q ss_pred HHHHHHHHhCc--HhHHHHHHHHHHHHHH
Q psy3913 307 LMAKAYLFWGE--EKYLNSCIKCGEVIWE 333 (423)
Q Consensus 307 ~l~~~~~~~~~--~~~~~~a~~~~~~~~~ 333 (423)
-|++.+..+++ +.+++.-.++.+.+.+
T Consensus 250 YLlK~~il~g~~~~~y~~m~~~a~~~i~~ 278 (503)
T 1hcu_A 250 YLIKMYLYDPVAFAHYKDRWVLGADSTIG 278 (503)
T ss_dssp HHHHHHHHCTTTTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCchHHHHHHHHHHHHHHHH
Confidence 57788887765 4677777777666643
No 53
>2yik_A Endoglucanase; hydrolase; 2.10A {Clostridium thermocellum}
Probab=57.06 E-value=63 Score=32.56 Aligned_cols=72 Identities=21% Similarity=0.379 Sum_probs=45.1
Q ss_pred hHHHHHHHHHHHHhC--cHhHHHHHHHHHHHHHHhC-----CCCCC---CcccCchhh----HHHHHHHHHHHcCChHHH
Q psy3913 302 PGVIYLMAKAYLFWG--EEKYLNSCIKCGEVIWEKG-----LLKKG---PGICHGVSG----NGYAFLLLYRLTKDEQYL 367 (423)
Q Consensus 302 ~Gi~~~l~~~~~~~~--~~~~~~~a~~~~~~~~~~g-----~~~~~---~~LChG~aG----~~~~ll~l~~~t~~~~~~ 367 (423)
...+-+|+.++++++ |+.|-+.+.+.++.+|+.. ....+ .+=.-|.+| ...+-..||+.|++++|+
T Consensus 220 ~~~AAAlAaAS~vfk~~D~~yA~~~L~~Ak~~~~fA~~~~~~y~~~~~~~~~~Y~ss~~~DEl~WAAawLy~ATgd~~Yl 299 (611)
T 2yik_A 220 SATAASLAINYMNFKDTDPQYAAKSLDYAKALFDFAEKNPKGVVQGEDGPKGYYGSSKWQDDYCWAAAWLYLATQNEHYL 299 (611)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHSCCCCCCGGGTTTTTSCCCCSHHHHHHHHHHHHHHHCCHHHH
T ss_pred HHHHHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHHcCCcccCCCcccCcCCCCCCcccHHHHHHHHHHHHhCCHHHH
Confidence 344567888888885 6777777777777776522 11001 011112233 356667889999999999
Q ss_pred HHHHHH
Q psy3913 368 HKAYLF 373 (423)
Q Consensus 368 ~~a~~~ 373 (423)
+.+...
T Consensus 300 ~~a~~~ 305 (611)
T 2yik_A 300 DEAFKY 305 (611)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 888754
No 54
>2ri9_A Mannosyl-oligosaccharide alpha-1,2-mannosidase; alternative conformations, modulation of activity, glycoprot glycosidase, hydrolase; HET: NAG NDG MAN MMA; 1.95A {Penicillium citrinum} SCOP: a.102.2.1 PDB: 2ri8_A* 1kkt_A* 1kre_A* 1krf_A*
Probab=51.92 E-value=35 Score=33.26 Aligned_cols=73 Identities=21% Similarity=0.299 Sum_probs=48.7
Q ss_pred HHHHHHHHh-Cc-----------HhHHHHHHHHHHHHHH-----hCCCC---------CCCcccCchhhHH---HHHHHH
Q psy3913 307 LMAKAYLFW-GE-----------EKYLNSCIKCGEVIWE-----KGLLK---------KGPGICHGVSGNG---YAFLLL 357 (423)
Q Consensus 307 ~l~~~~~~~-~~-----------~~~~~~a~~~~~~~~~-----~g~~~---------~~~~LChG~aG~~---~~ll~l 357 (423)
-|+.||.++ ++ +.+++.|...++.+.. .|++. ...+-+..+|+.+ .=|.+|
T Consensus 95 GLLSAy~Ls~g~~~~~~~~~~~~~~lL~kA~dLadrLlpAF~TptgiP~~~vnl~~~~~~~~~~~~~Ae~gsl~LEF~~L 174 (475)
T 2ri9_A 95 GMLSGYDLLQGPAKNLVDNQDLIDGLLDQSRNLADVLKFAFDTPSGVPYNNINITSHGNDGATTNGLAVTGTLVLEWTRL 174 (475)
T ss_dssp HHHHHHHHHHTTTTTSCCCHHHHHHHHHHHHHHHHHHGGGGCSSSSCCCSEECTTTCCBCCCSEEEHHHHHSCHHHHHHH
T ss_pred HHhHHHHhccCccccccccccchHHHHHHHHHHHHHHHHhhcCCCCCCCceeecccCCCcCCCccchhccccceeeHHHH
Confidence 466777776 55 6888888888887742 23320 0111122345443 556788
Q ss_pred HHHcCChHHHHHHHHHHHHhhc
Q psy3913 358 YRLTKDEQYLHKAYLFANFMLS 379 (423)
Q Consensus 358 ~~~t~~~~~~~~a~~~~~~~~~ 379 (423)
+++|||++|.+.|+++.+.+..
T Consensus 175 S~lTGd~~Y~~~a~~~~~~l~~ 196 (475)
T 2ri9_A 175 SDLTGDEEYAKLSQKAESYLLK 196 (475)
T ss_dssp HHHHSCTHHHHHHHHHHHHHHS
T ss_pred HHHhCCHHHHHHHHHHHHHHHh
Confidence 9999999999999999888753
No 55
>1wzz_A Probable endoglucanase; glycoside hydrolase family 8 (GH-8), (alpha/alpha)6 barrel, structural genomics; 1.65A {Gluconacetobacter xylinus} SCOP: a.102.1.2
Probab=47.44 E-value=42 Score=31.01 Aligned_cols=78 Identities=14% Similarity=0.126 Sum_probs=54.0
Q ss_pred CchHHHHHHHHHHHHhCcHhHHHHHHHHHHHHHHhCCCCCC--CcccCchhh--------------HHHHHHHHHHHcCC
Q psy3913 300 GAPGVIYLMAKAYLFWGEEKYLNSCIKCGEVIWEKGLLKKG--PGICHGVSG--------------NGYAFLLLYRLTKD 363 (423)
Q Consensus 300 G~~Gi~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~g~~~~~--~~LChG~aG--------------~~~~ll~l~~~t~~ 363 (423)
|+.=|+++|+.|.+..+++.|...|.++++.+++....... .-|.=|.-| ...+|..+++.+++
T Consensus 107 gDl~IA~ALl~A~~~Wg~~~Y~~~A~~il~~i~~~~v~~~~g~~~llPg~~gf~~~~~~~~npSY~~p~~~~~fa~~~~~ 186 (334)
T 1wzz_A 107 GDLLIALALGRAGKRFQRPDYIQDAMAIYGDVLNLMTMKAGPYVVLMPGAVGFTKKDSVILNLSYYVMPSLLQAFDLTAD 186 (334)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHEEEETTEEEECSCSSSCBCSSEEEECGGGCCHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcccCCCCeEEECCCcccccCCCCCeechhhcCHHHHHHHHHccCC
Confidence 55568899999999999999999999999999875432100 112224332 23566667788888
Q ss_pred hHHHHHHHHHHHHh
Q psy3913 364 EQYLHKAYLFANFM 377 (423)
Q Consensus 364 ~~~~~~a~~~~~~~ 377 (423)
..|.+.+..-...+
T Consensus 187 ~~W~~~~~~~~~ll 200 (334)
T 1wzz_A 187 PRWRQVMEDGIRLV 200 (334)
T ss_dssp THHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHH
Confidence 88888776655544
No 56
>1ks8_A Endo-B-1,4-glucanase; cellulase, endoglucanase, termite, glycosyl hydrolase, family 9, (alpha/alpha)6; 1.40A {Nasutitermes takasagoensis} SCOP: a.102.1.2 PDB: 1ksc_A 1ksd_A
Probab=34.58 E-value=3.1e+02 Score=26.09 Aligned_cols=118 Identities=14% Similarity=0.155 Sum_probs=68.0
Q ss_pred HHHHHhccccccCCCcchHHHHHHHHHHHHHccCCCCCCCCCCccCCCCCccccccccccccccCchHHHHHHHHHHHHh
Q psy3913 236 ILQVLLCEKNYVKSNPDIEKDIKETVDFLLKLQMPNGNFPADLKELYSPTDAKSAANELVHWCHGAPGVIYLMAKAYLFW 315 (423)
Q Consensus 236 I~~~Ll~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~g~wp~~~~~~~~~~~~~~~~~~~~~WChG~~Gi~~~l~~~~~~~ 315 (423)
.+++-..++..++ ++.+++.++.-.+.+. ...|+ ....|=.=.+|....|. ++.
T Consensus 215 ~~WAAa~Ly~aTg-d~~Yl~~~~~~~~~~~-----~~~~~-----------------~~~~Wd~~~~g~~~lla---~~~ 268 (433)
T 1ks8_A 215 LVWAAAWLYRATN-DNTYLNTAESLYDEFG-----LQNWG-----------------GGLNWDSKVSGVQVLLA---KLT 268 (433)
T ss_dssp HHHHHHHHHHHHC-CHHHHHHHHHHHHHTT-----GGGSC-----------------CCCCSSCCHHHHHHHHH---HHH
T ss_pred HHHHHHHHHHHhC-CHHHHHHHHHHHHhcC-----cCcCc-----------------CCcCccchhhHHHHHHh---hcc
Confidence 4566666777787 6777777765332210 01110 01122222245443333 445
Q ss_pred CcHhHHHHHHHHHHHHHHhCCCCCCCcccC----c----hhhHHHHHHHHHHH-cCChHHHHHHHHHHHHhhch
Q psy3913 316 GEEKYLNSCIKCGEVIWEKGLLKKGPGICH----G----VSGNGYAFLLLYRL-TKDEQYLHKAYLFANFMLSD 380 (423)
Q Consensus 316 ~~~~~~~~a~~~~~~~~~~g~~~~~~~LCh----G----~aG~~~~ll~l~~~-t~~~~~~~~a~~~~~~~~~~ 380 (423)
.++++++.++..++.+...- .....|+.. | ++..+.+++.+++. +++.+|++.|.+-+++++.+
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~-~~tp~Gl~~~~~WGs~~~~~n~a~l~~~~~~~~~~~~~y~~~A~~qldYiLG~ 341 (433)
T 1ks8_A 269 NKQAYKDTVQSYVNYLINNQ-QKTPKGLLYIDMWGTLRHAANAAFIMLEAAELGLSASSYRQFAQTQIDYALGD 341 (433)
T ss_dssp CCHHHHHHHHHHHHHHHHTS-CBCTTSCBCCCSTTHHHHHHHHHHHHHHHHHTTSSHHHHHHHHHHHHHHHHTT
T ss_pred ChHHHHHHHHHHHHHHHhcC-CcCCCCceeecCCchhHHHHHHHHHHHHHHhcCCCHHHHHHHHHHhHhhccCC
Confidence 77888888888777665421 111122221 3 45566677777777 88899999999999999854
No 57
>1ia6_A Cellulase CEL9M; cellullase, alpha barrel, hydrolase; 1.80A {Clostridium cellulolyticum} SCOP: a.102.1.2 PDB: 1ia7_A*
Probab=33.96 E-value=3.2e+02 Score=26.07 Aligned_cols=184 Identities=12% Similarity=0.034 Sum_probs=91.3
Q ss_pred HHHHHHHHHHhC--ChhHHHHHHHHHHHHHHHHhhccccCCCCccccccchh----HHHHHHHHHHHhCcccCcHHHHHH
Q psy3913 122 HAVLGVFYNAVG--DKERSQCHFDMYTKLATHIKAIDYVKFGGDEFLVGRAG----YLAGIIWAERQLGRQIMSLEDRTA 195 (423)
Q Consensus 122 ~~l~~~l~~~~~--~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~d~l~G~aG----~l~~ll~l~~~~~~~~~~~~~i~~ 195 (423)
.+.++..+...+ |+.+.++.++.++++-....+.. ......-.++.+| .+++..+|++.++++.+++ .+++
T Consensus 159 AAalAaas~vfk~~D~~yA~~~L~~A~~~~~fa~~~~--g~~~~~~~Y~ss~~~DE~~WAAa~Ly~aTgd~~Yl~-~a~~ 235 (441)
T 1ia6_A 159 SAALTLMYLNYKNIDSAYATKCLNAAKELYAMGKANQ--GVGNGQSFYQATSFGDDLAWAATWLYTATNDSTYIT-DAEQ 235 (441)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHSC--SCCCCTTTSCCCCSHHHHHHHHHHHHHHHCCTHHHH-HHHH
T ss_pred HHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHHcC--CCCCCCCCCCCCCchhHHHHHHHHHHHHhCCHHHHH-HHHH
Confidence 455555566654 56677777777766655433211 0011122334444 5689999999999865543 2222
Q ss_pred HHHHHHHcCccccccccCCCCcceeecCCcccccccchHHHHHHHhccccccCCCcchHHHHHHHHHHHHHcc--CCCCC
Q psy3913 196 ICNALILSGRSYSQANNLRCPLMYHYYGTEYLGACHGLSGILQVLLCEKNYVKSNPDIEKDIKETVDFLLKLQ--MPNGN 273 (423)
Q Consensus 196 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~aHG~~GI~~~Ll~~~~~~~~~~~~~~~i~~~~~~l~~~~--~~~g~ 273 (423)
......+.+.. ..+..| ..+|---.+|+.+.|.+. .+ +..+.+.++..+++..... .+.|.
T Consensus 236 ~~~~~~~~~~~-------~~~~~~------~~~Wd~~~~g~~~lla~~---~~-~~~~~~~~~~~~~~~~~~~~~tp~Gl 298 (441)
T 1ia6_A 236 FITLGNTMNEN-------KMQDKW------TMCWDDMYVPAALRLAQI---TG-KQIYKDAIEFNFNYWKTQVTTTPGGL 298 (441)
T ss_dssp HTTC------C-------GGGCSS------CSSSSCCHHHHHHHHHHH---HC-CHHHHHHHHHHHHHHHHTSCBCTTSC
T ss_pred HHhhhhhcccc-------cccCCC------cCCccchHHHHHHHHHhc---cC-cHHHHHHHHHHHHHHHhhcccCCCCc
Confidence 21111110000 000001 123333355654444432 23 4567777877777766421 12221
Q ss_pred CCCCCccCCCCCccccccccccccccCc----hHHHHHHHHHHHHhCcHhHHHHHHHHHHHHHHhCCCCCCCcccCch
Q psy3913 274 FPADLKELYSPTDAKSAANELVHWCHGA----PGVIYLMAKAYLFWGEEKYLNSCIKCGEVIWEKGLLKKGPGICHGV 347 (423)
Q Consensus 274 wp~~~~~~~~~~~~~~~~~~~~~WChG~----~Gi~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~g~~~~~~~LChG~ 347 (423)
+ ....| |. +..+.+++.+++.+++++|++.|++.++.++-+.. .+.|+..|.
T Consensus 299 -~-----------------~~~~W--Gs~~~~~~~a~l~~~~~~~~~~~~y~~~A~~qldYiLG~NP--~~~SyvvG~ 354 (441)
T 1ia6_A 299 -K-----------------WLSNW--GVLRYAAAESMVMLVYCKQNPDQSLLDLAKKQVDYILGDNP--ANMSYIIGY 354 (441)
T ss_dssp -B-----------------CCCST--THHHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHTCST--TCCCSBTTS
T ss_pred -e-----------------ecCCc--chHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHhcCCCC--CCceeEEec
Confidence 1 11245 33 23333344456677899999999999998864322 134554443
No 58
>1w6k_A Lanosterol synthase; cyclase, cholesterol, monotopic membrane protein, B-octyl-glucoside, isomerase, steroid biosynthesis; HET: BOG LAN; 2.1A {Homo sapiens} SCOP: a.102.4.2 a.102.4.2 PDB: 1w6j_A*
Probab=31.78 E-value=1e+02 Score=31.76 Aligned_cols=47 Identities=21% Similarity=0.300 Sum_probs=31.6
Q ss_pred cccchHHHHHHHhccccccCCCcchHHHHHHHHHHHHHccCCCCCCCC
Q psy3913 229 ACHGLSGILQVLLCEKNYVKSNPDIEKDIKETVDFLLKLQMPNGNFPA 276 (423)
Q Consensus 229 ~aHG~~GI~~~Ll~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~g~wp~ 276 (423)
..||.+-.+.+|..+..... +....+.++++++|+++.|.++|.|..
T Consensus 585 ~~Y~T~~al~AL~~aG~~~~-~~~~~~~i~rav~~Lls~Q~~DGGWge 631 (732)
T 1w6k_A 585 FTYGTWFGLEAFACMGQTYR-DGTACAEVSRACDFLLSRQMADGGWGE 631 (732)
T ss_dssp HHHHHHHHHHHHHHTTCCCB-TTBCCHHHHHHHHHHHTTCCTTSCCCB
T ss_pred cchHHHHHHHHHHHhCCccc-ccchhHHHHHHHHHHHHhcccCCCCCC
Confidence 44566656666666654322 222336799999999999888898964
No 59
>1w6k_A Lanosterol synthase; cyclase, cholesterol, monotopic membrane protein, B-octyl-glucoside, isomerase, steroid biosynthesis; HET: BOG LAN; 2.1A {Homo sapiens} SCOP: a.102.4.2 a.102.4.2 PDB: 1w6j_A*
Probab=28.44 E-value=87 Score=32.33 Aligned_cols=106 Identities=15% Similarity=0.113 Sum_probs=56.6
Q ss_pred CcchHHHHHHHHHHHHHccCCCCCCCCCCccCCCCCccccccccccccccCchHHHHHHHHHHHHhCcHhHHHHHHHHHH
Q psy3913 250 NPDIEKDIKETVDFLLKLQMPNGNFPADLKELYSPTDAKSAANELVHWCHGAPGVIYLMAKAYLFWGEEKYLNSCIKCGE 329 (423)
Q Consensus 250 ~~~~~~~i~~~~~~l~~~~~~~g~wp~~~~~~~~~~~~~~~~~~~~~WChG~~Gi~~~l~~~~~~~~~~~~~~~a~~~~~ 329 (423)
.+...+.++++++++.+.|.++|.|+...+ .+ +--.+|.+.++..+.... .++ ..+++.+
T Consensus 70 ~~~~~~a~~~~~~~~~~~Q~~dG~W~~~~~-----------~~-----~~~~~~~v~~~~~~~~~~-~~~---~~~~~~~ 129 (732)
T 1w6k_A 70 AHTAFEGALNGMTFYVGLQAEDGHWTGDYG-----------GP-----LFLLPGLLITCHVARIPL-PAG---YREEIVR 129 (732)
T ss_dssp CCSHHHHHHHHHHHHHTTBCTTSCBCCCCC-----------CB-----SSHHHHHHHHHHHHTCCC-CTT---HHHHHHH
T ss_pred cccHHHHHHHHHHHHHHhcCCCCCcccccc-----------Cc-----hhhhHHHHHHHHHhCCCC-CHH---HHHHHHH
Confidence 346778899999999999999999984322 12 334566665444432111 222 3344455
Q ss_pred HHHHhCCCCCCCcccCchhh------HHHHHHHHHHHcCChHHHHHHHHHHH
Q psy3913 330 VIWEKGLLKKGPGICHGVSG------NGYAFLLLYRLTKDEQYLHKAYLFAN 375 (423)
Q Consensus 330 ~~~~~g~~~~~~~LChG~aG------~~~~ll~l~~~t~~~~~~~~a~~~~~ 375 (423)
.+.+.--..-+-++.+|-.+ ..|+-|++.-...+.....+|++++.
T Consensus 130 yl~~~Q~~DGgWgl~~~~~s~~~~T~~~Y~aLrl~G~~~~~~~~~~ar~~i~ 181 (732)
T 1w6k_A 130 YLRSVQLPDGGWGLHIEDKSTVFGTALNYVSLRILGVGPDDPDLVRARNILH 181 (732)
T ss_dssp HHHHHSCTTSCBCSBTTSCCBHHHHHHHHHHHHHTTCCTTSHHHHHHHHHHH
T ss_pred HHHHhcCCCCCccCCcCCCccHHHHHHHHHHHHHcCCCCCcHHHHHHHHHHH
Confidence 55442111112233333222 22555555544555566777776543
No 60
>2pqr_C WD repeat protein YKR036C; TPR domain, protein-protein complex, apoptosis; 1.88A {Saccharomyces cerevisiae}
Probab=28.02 E-value=3.8 Score=27.30 Aligned_cols=42 Identities=12% Similarity=0.016 Sum_probs=22.3
Q ss_pred CCCCCCCCCCCCCcccchhHHHHHHHHHHHHHHHhCCCCcccccCCCCCCcccch
Q psy3913 8 HFINRLDLNKGGSLVENFTVWKEEADKIIQSVLINVDANADITKHKIDHTMYTGN 62 (423)
Q Consensus 8 ~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ly~G~ 62 (423)
||.|.+.+- ++..++..+++.++.+++... .+....|||.|.
T Consensus 13 ~FrnklS~s----------eiqfRaLsyLDdlL~nIP~~~---~~~~~~SLFQGF 54 (64)
T 2pqr_C 13 SFQNNYADS----------ATTFRILAHLDEQRYPLPNGA---AEKNLPSLFEGF 54 (64)
T ss_dssp --------C----------CHHHHHHTCCCTTTSCCC-------CCSCCCHHHHH
T ss_pred EEecccCch----------HHHHHHHHHHHHHHHhCCCCc---ccCCCcchhhhh
Confidence 556666543 566677777788999887541 234578898884
No 61
>1wu4_A Xylanase Y; (alpla/alpha)6 barrel, glycoside hydrolase family 8, hydrola; 1.35A {Bacillus halodurans} SCOP: a.102.1.2 PDB: 1wu5_A* 3a3v_A 2drr_A 2drs_A 1wu6_A* 2drq_A 2dro_A
Probab=27.24 E-value=2.3e+02 Score=26.72 Aligned_cols=37 Identities=19% Similarity=0.127 Sum_probs=30.8
Q ss_pred CchHHHHHHHHHHHHhC-----cHhHHHHHHHHHHHHHHhCC
Q psy3913 300 GAPGVIYLMAKAYLFWG-----EEKYLNSCIKCGEVIWEKGL 336 (423)
Q Consensus 300 G~~Gi~~~l~~~~~~~~-----~~~~~~~a~~~~~~~~~~g~ 336 (423)
|+.=|+++|+.|.+..+ ++.|...|.++++.+++...
T Consensus 129 gDl~IA~ALl~A~~~Wg~~~g~~~~Y~~~A~~il~~i~~~~~ 170 (396)
T 1wu4_A 129 GEEYFALALFFASHRWGDGDEQPFNYSEQARKLLHTCVHNGE 170 (396)
T ss_dssp HHHHHHHHHHHHHHHHCCCSSTTCCHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHhhc
Confidence 44457888999999988 68899999999999987654
No 62
>1kwf_A Endoglucanase A; hydrolase, inverting glycosidase, atomic resolution, protein-carbohydrate interactions, reaction mechanism, cellulase; HET: BGC; 0.94A {Clostridium thermocellum} SCOP: a.102.1.2 PDB: 1is9_A 1cem_A
Probab=23.03 E-value=3e+02 Score=25.50 Aligned_cols=78 Identities=12% Similarity=0.118 Sum_probs=48.9
Q ss_pred CchHHHHHHHHHHHHhCcH---hHHHHHHHHHHHHHHhCCCCCCCcccCch--hh---------HHHHHHHHHHHcCChH
Q psy3913 300 GAPGVIYLMAKAYLFWGEE---KYLNSCIKCGEVIWEKGLLKKGPGICHGV--SG---------NGYAFLLLYRLTKDEQ 365 (423)
Q Consensus 300 G~~Gi~~~l~~~~~~~~~~---~~~~~a~~~~~~~~~~g~~~~~~~LChG~--aG---------~~~~ll~l~~~t~~~~ 365 (423)
|+.=|+.+|+.|.+..+++ .|...|+++++.++++.......-|.-|. .+ .-.+|-.+++.++++.
T Consensus 121 gDl~IA~ALl~A~~~W~~~g~~~Y~~~A~~i~~~i~~~~~~~~~~~l~pg~~~~~~~~~npSY~~p~~~~~fa~~~~~~~ 200 (363)
T 1kwf_A 121 ADEDIALALIFADKLWGSSGAINYGQEARTLINNLYNHCVEHGSYVLKPGDRWGGSSVTNPSYFAPAWYKVYAQYTGDTR 200 (363)
T ss_dssp HHHHHHHHHHHHHHHHCSSSSSCHHHHHHHHHHHHHHHHBCTTTCCBCSBSSSCBTTBBCGGGCCHHHHHHHHHHHCCTH
T ss_pred HHHHHHHHHHHHHHHhCCCcchhHHHHHHHHHHHHHHHhccCCCeEEeccccCCCCCEecchhcCHHHHHHHHHccCCch
Confidence 5555888999999998887 89999999999887643311001122221 11 1234455566777777
Q ss_pred HHHHHHHHHHHh
Q psy3913 366 YLHKAYLFANFM 377 (423)
Q Consensus 366 ~~~~a~~~~~~~ 377 (423)
|.+.+..-...+
T Consensus 201 W~~~~~~~~~~l 212 (363)
T 1kwf_A 201 WNQVADKCYQIV 212 (363)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 877666544433
Done!