BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3916
(103 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2KHO|A Chain A, Nmr-Rdc XRAY STRUCTURE OF E. COLI HSP70 (DNAK) CHAPERONE
(1-605) Complexed With Adp And Substrate
Length = 605
Score = 121 bits (304), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 52/93 (55%), Positives = 73/93 (78%)
Query: 1 MEGKQAKVIENSEGSRTTPSVVAFTKDGERLVGTPARRQAVTNSANTFYATKRLIGRRFD 60
M+G +V+EN+EG RTTPS++A+T+DGE LVG PA+RQAVTN NT +A KRLIGRRF
Sbjct: 19 MDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQ 78
Query: 61 DPEIKKDMKNLSYKIVRASNGDAWVQGKNIRIS 93
D E+++D+ + +KI+ A NGDAWV+ K +++
Sbjct: 79 DEEVQRDVSIMPFKIIAADNGDAWVEVKGQKMA 111
>pdb|1DKG|D Chain D, Crystal Structure Of The Nucleotide Exchange Factor Grpe
Bound To The Atpase Domain Of The Molecular Chaperone
Dnak
Length = 383
Score = 121 bits (303), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 52/93 (55%), Positives = 73/93 (78%)
Query: 1 MEGKQAKVIENSEGSRTTPSVVAFTKDGERLVGTPARRQAVTNSANTFYATKRLIGRRFD 60
M+G +V+EN+EG RTTPS++A+T+DGE LVG PA+RQAVTN NT +A KRLIGRRF
Sbjct: 19 MDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQ 78
Query: 61 DPEIKKDMKNLSYKIVRASNGDAWVQGKNIRIS 93
D E+++D+ + +KI+ A NGDAWV+ K +++
Sbjct: 79 DEEVQRDVSIMPFKIIAADNGDAWVEVKGQKMA 111
>pdb|4B9Q|A Chain A, Open Conformation Of Atp-Bound Hsp70 Homolog Dnak
pdb|4B9Q|B Chain B, Open Conformation Of Atp-Bound Hsp70 Homolog Dnak
pdb|4B9Q|C Chain C, Open Conformation Of Atp-Bound Hsp70 Homolog Dnak
pdb|4B9Q|D Chain D, Open Conformation Of Atp-Bound Hsp70 Homolog Dnak
Length = 605
Score = 113 bits (282), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 50/87 (57%), Positives = 67/87 (77%)
Query: 2 EGKQAKVIENSEGSRTTPSVVAFTKDGERLVGTPARRQAVTNSANTFYATKRLIGRRFDD 61
+G +V+EN+EG RTTPS++A+T+DG LVG PA+RQAVTN NT +A KRLIGRRF D
Sbjct: 20 DGTTPRVLENAEGDRTTPSIIAYTQDGCTLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQD 79
Query: 62 PEIKKDMKNLSYKIVRASNGDAWVQGK 88
E+++D+ +KI+ A NGDAWV+ K
Sbjct: 80 EEVQRDVSIXPFKIIAADNGDAWVEVK 106
>pdb|3IUC|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 5
(BipGRP78) ATPASE DOMAIN IN COMPLEX WITH ADP
pdb|3IUC|C Chain C, Crystal Structure Of The Human 70kda Heat Shock Protein 5
(BipGRP78) ATPASE DOMAIN IN COMPLEX WITH ADP
Length = 408
Score = 78.2 bits (191), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 51/70 (72%)
Query: 7 KVIENSEGSRTTPSVVAFTKDGERLVGTPARRQAVTNSANTFYATKRLIGRRFDDPEIKK 66
++I N +G+R TPS VAFT +GERL+G A+ Q +N NT + KRLIGR ++DP +++
Sbjct: 49 EIIANDQGNRITPSYVAFTPEGERLIGDAAKNQLTSNPENTVFDAKRLIGRTWNDPSVQQ 108
Query: 67 DMKNLSYKIV 76
D+K L +K+V
Sbjct: 109 DIKFLPFKVV 118
>pdb|3LDL|A Chain A, Crystal Structure Of Human Grp78 (70kda Heat Shock
Protein 5 BIP) Atpase Domain In Complex With Atp
pdb|3LDL|B Chain B, Crystal Structure Of Human Grp78 (70kda Heat Shock
Protein 5 BIP) Atpase Domain In Complex With Atp
pdb|3LDN|A Chain A, Crystal Structure Of Human Grp78 (70kda Heat Shock
Protein 5 BIP) Atpase Domain In Apo Form
pdb|3LDN|B Chain B, Crystal Structure Of Human Grp78 (70kda Heat Shock
Protein 5 BIP) Atpase Domain In Apo Form
pdb|3LDO|A Chain A, Crystal Structure Of Human Grp78 (70kda Heat Shock
Protein 5 / Bip) Atpase Domain In Complex With Amppnp
pdb|3LDO|B Chain B, Crystal Structure Of Human Grp78 (70kda Heat Shock
Protein 5 / Bip) Atpase Domain In Complex With Amppnp
pdb|3LDP|A Chain A, Crystal Structure Of Human Grp78 (70kda Heat Shock
Protein 5 BIP) Atpase Domain In Complex With Small
Molecule Inhibitor
pdb|3LDP|B Chain B, Crystal Structure Of Human Grp78 (70kda Heat Shock
Protein 5 BIP) Atpase Domain In Complex With Small
Molecule Inhibitor
Length = 384
Score = 78.2 bits (191), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 51/70 (72%)
Query: 7 KVIENSEGSRTTPSVVAFTKDGERLVGTPARRQAVTNSANTFYATKRLIGRRFDDPEIKK 66
++I N +G+R TPS VAFT +GERL+G A+ Q +N NT + KRLIGR ++DP +++
Sbjct: 28 EIIANDQGNRITPSYVAFTPEGERLIGDAAKNQLTSNPENTVFDAKRLIGRTWNDPSVQQ 87
Query: 67 DMKNLSYKIV 76
D+K L +K+V
Sbjct: 88 DIKFLPFKVV 97
>pdb|3GL1|A Chain A, Crystal Structure Of Atpase Domain Of Ssb1 Chaperone, A
Member Of The Hsp70 Family, From Saccharomyces
Cerevisiae
pdb|3GL1|B Chain B, Crystal Structure Of Atpase Domain Of Ssb1 Chaperone, A
Member Of The Hsp70 Family, From Saccharomyces
Cerevisiae
Length = 387
Score = 77.4 bits (189), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 49/70 (70%), Gaps = 1/70 (1%)
Query: 7 KVIENSEGSRTTPSVVAFTKDGERLVGTPARRQAVTNSANTFYATKRLIGRRFDDPEIKK 66
++I N +G+R TPS VAFT + ERL+G A+ QA N NT + KRLIGRRFDD ++K
Sbjct: 32 EIIANEQGNRVTPSFVAFTPE-ERLIGDAAKNQAALNPRNTVFDAKRLIGRRFDDESVQK 90
Query: 67 DMKNLSYKIV 76
DMK +K++
Sbjct: 91 DMKTWPFKVI 100
>pdb|1QQM|A Chain A, D199s Mutant Of Bovine 70 Kilodalton Heat Shock Protein
Length = 378
Score = 76.6 bits (187), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Query: 5 QAKVIENSEGSRTTPSVVAFTKDGERLVGTPARRQAVTNSANTFYATKRLIGRRFDDPEI 64
+ ++I N +G+RTTPS VAFT D ERL+G A+ Q N NT + KRLIGRRFDD +
Sbjct: 22 KVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVV 80
Query: 65 KKDMKNLSYKIV 76
+ DMK+ + +V
Sbjct: 81 QSDMKHWPFMVV 92
>pdb|2QWN|A Chain A, Crystal Structure Of Disulfide-Bond-Crosslinked Complex
Of Bovine Hsc70 (1-386aa)r171c And Bovine Auxilin
(810-910aa)d876c In The AdpPi State
pdb|2QWO|A Chain A, Crystal Structure Of Disulfide-Bond-Crosslinked Complex
Of Bovine Hsc70 (1-394aa)r171c And Bovine Auxilin
(810-910aa)d876c In The AdpPi Form #1
pdb|2QWP|A Chain A, Crystal Structure Of Disulfide-Bond-Crosslinked Complex
Of Bovine Hsc70 (1-394aa)r171c And Bovine Auxilin
(810-910aa)d876c In The AdpPi Form #2
pdb|2QWQ|A Chain A, Crystal Structure Of Disulfide-Bond-Crosslinked Complex
Of Bovine Hsc70 (1-394aa)r171c And Bovine Auxilin
(810-910aa)d876c In The Amppnp Hydrolyzed Form
pdb|2QWR|A Chain A, Crystal Structure Of Disulfide-Bond-Crosslinked Complex
Of Bovine Hsc70 (1-394aa)r171c And Bovine Auxilin
(810-910aa)d876c In The Amppnp Intact Form
Length = 394
Score = 76.3 bits (186), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Query: 5 QAKVIENSEGSRTTPSVVAFTKDGERLVGTPARRQAVTNSANTFYATKRLIGRRFDDPEI 64
+ ++I N +G+RTTPS VAFT D ERL+G A+ Q N NT + KRLIGRRFDD +
Sbjct: 25 KVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVV 83
Query: 65 KKDMKNLSYKIV 76
+ DMK+ + +V
Sbjct: 84 QSDMKHWPFMVV 95
>pdb|2QW9|A Chain A, Crystal Structure Of Bovine Hsc70 (1-394aa)in The Apo
State
pdb|2QW9|B Chain B, Crystal Structure Of Bovine Hsc70 (1-394aa)in The Apo
State
pdb|2QWL|A Chain A, Crystal Structure Of Bovine Hsc70 (1-394aa)in The Adp
State
pdb|2QWL|B Chain B, Crystal Structure Of Bovine Hsc70 (1-394aa)in The Adp
State
pdb|2QWM|A Chain A, Crystal Structure Of Bovine Hsc70 (1-394aa)in The AdpVi
State
pdb|2QWM|B Chain B, Crystal Structure Of Bovine Hsc70 (1-394aa)in The AdpVi
State
Length = 394
Score = 76.3 bits (186), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Query: 5 QAKVIENSEGSRTTPSVVAFTKDGERLVGTPARRQAVTNSANTFYATKRLIGRRFDDPEI 64
+ ++I N +G+RTTPS VAFT D ERL+G A+ Q N NT + KRLIGRRFDD +
Sbjct: 25 KVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVV 83
Query: 65 KKDMKNLSYKIV 76
+ DMK+ + +V
Sbjct: 84 QSDMKHWPFMVV 95
>pdb|2BUP|A Chain A, T13g Mutant Of The Atpase Fragment Of Bovine Hsc70
Length = 381
Score = 76.3 bits (186), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Query: 5 QAKVIENSEGSRTTPSVVAFTKDGERLVGTPARRQAVTNSANTFYATKRLIGRRFDDPEI 64
+ ++I N +G+RTTPS VAFT D ERL+G A+ Q N NT + KRLIGRRFDD +
Sbjct: 25 KVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVV 83
Query: 65 KKDMKNLSYKIV 76
+ DMK+ + +V
Sbjct: 84 QSDMKHWPFMVV 95
>pdb|1ATR|A Chain A, Threonine 204 Of The Chaperone Protein Hsc70 Influences
The Structure Of The Active Site But Is Not Essential
For Atp Hydrolysis
Length = 386
Score = 76.3 bits (186), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Query: 5 QAKVIENSEGSRTTPSVVAFTKDGERLVGTPARRQAVTNSANTFYATKRLIGRRFDDPEI 64
+ ++I N +G+RTTPS VAFT D ERL+G A+ Q N NT + KRLIGRRFDD +
Sbjct: 25 KVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVV 83
Query: 65 KKDMKNLSYKIV 76
+ DMK+ + +V
Sbjct: 84 QSDMKHWPFMVV 95
>pdb|1BUP|A Chain A, T13s Mutant Of Bovine 70 Kilodalton Heat Shock Protein
Length = 386
Score = 76.3 bits (186), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Query: 5 QAKVIENSEGSRTTPSVVAFTKDGERLVGTPARRQAVTNSANTFYATKRLIGRRFDDPEI 64
+ ++I N +G+RTTPS VAFT D ERL+G A+ Q N NT + KRLIGRRFDD +
Sbjct: 25 KVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVV 83
Query: 65 KKDMKNLSYKIV 76
+ DMK+ + +V
Sbjct: 84 QSDMKHWPFMVV 95
>pdb|1QQO|A Chain A, E175s Mutant Of Bovine 70 Kilodalton Heat Shock Protein
Length = 378
Score = 76.3 bits (186), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Query: 5 QAKVIENSEGSRTTPSVVAFTKDGERLVGTPARRQAVTNSANTFYATKRLIGRRFDDPEI 64
+ ++I N +G+RTTPS VAFT D ERL+G A+ Q N NT + KRLIGRRFDD +
Sbjct: 22 KVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVV 80
Query: 65 KKDMKNLSYKIV 76
+ DMK+ + +V
Sbjct: 81 QSDMKHWPFMVV 92
>pdb|3FZF|A Chain A, Crystal Structure Of Hsc70BAG1 IN COMPLEX WITH ATP
pdb|3FZH|A Chain A, Crystal Structures Of Hsc70BAG1 IN COMPLEX WITH SMALL
Molecule Inhibitors
pdb|3FZK|A Chain A, Crystal Structures Of Hsc70BAG1 IN COMPLEX WITH SMALL
Molecule Inhibitors
pdb|3FZL|A Chain A, Crystal Structures Of Hsc70BAG1 IN COMPLEX WITH SMALL
Molecule Inhibitors
pdb|3FZM|A Chain A, Crystal Structures Of Hsc70BAG1 IN COMPLEX WITH SMALL
Molecule Inhibitors
pdb|3LDQ|A Chain A, Crystal Structure Of Hsc70BAG1 IN COMPLEX WITH SMALL
MOLECULE Inhibitor
pdb|3M3Z|A Chain A, Crystal Structure Of Hsc70/bag1 In Complex With Small
Molecule Inhibitor
Length = 381
Score = 76.3 bits (186), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Query: 5 QAKVIENSEGSRTTPSVVAFTKDGERLVGTPARRQAVTNSANTFYATKRLIGRRFDDPEI 64
+ ++I N +G+RTTPS VAFT D ERL+G A+ Q N NT + KRLIGRRFDD +
Sbjct: 25 KVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVV 83
Query: 65 KKDMKNLSYKIV 76
+ DMK+ + +V
Sbjct: 84 QSDMKHWPFMVV 95
>pdb|1YUW|A Chain A, Crystal Structure Of Bovine Hsc70(Aa1-554)e213aD214A
MUTANT
Length = 554
Score = 76.3 bits (186), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Query: 5 QAKVIENSEGSRTTPSVVAFTKDGERLVGTPARRQAVTNSANTFYATKRLIGRRFDDPEI 64
+ ++I N +G+RTTPS VAFT D ERL+G A+ Q N NT + KRLIGRRFDD +
Sbjct: 25 KVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVV 83
Query: 65 KKDMKNLSYKIV 76
+ DMK+ + +V
Sbjct: 84 QSDMKHWPFMVV 95
>pdb|1NGA|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
Length = 386
Score = 76.3 bits (186), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Query: 5 QAKVIENSEGSRTTPSVVAFTKDGERLVGTPARRQAVTNSANTFYATKRLIGRRFDDPEI 64
+ ++I N +G+RTTPS VAFT D ERL+G A+ Q N NT + KRLIGRRFDD +
Sbjct: 25 KVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVV 83
Query: 65 KKDMKNLSYKIV 76
+ DMK+ + +V
Sbjct: 84 QSDMKHWPFMVV 95
>pdb|1NGB|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
Length = 386
Score = 76.3 bits (186), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Query: 5 QAKVIENSEGSRTTPSVVAFTKDGERLVGTPARRQAVTNSANTFYATKRLIGRRFDDPEI 64
+ ++I N +G+RTTPS VAFT D ERL+G A+ Q N NT + KRLIGRRFDD +
Sbjct: 25 KVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVV 83
Query: 65 KKDMKNLSYKIV 76
+ DMK+ + +V
Sbjct: 84 QSDMKHWPFMVV 95
>pdb|1NGG|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
Length = 386
Score = 76.3 bits (186), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Query: 5 QAKVIENSEGSRTTPSVVAFTKDGERLVGTPARRQAVTNSANTFYATKRLIGRRFDDPEI 64
+ ++I N +G+RTTPS VAFT D ERL+G A+ Q N NT + KRLIGRRFDD +
Sbjct: 25 KVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVV 83
Query: 65 KKDMKNLSYKIV 76
+ DMK+ + +V
Sbjct: 84 QSDMKHWPFMVV 95
>pdb|1ATS|A Chain A, Threonine 204 Of The Chaperone Protein Hsc70 Influences
The Structure Of The Active Site But Is Not Essential
For Atp Hydrolysis
Length = 386
Score = 76.3 bits (186), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Query: 5 QAKVIENSEGSRTTPSVVAFTKDGERLVGTPARRQAVTNSANTFYATKRLIGRRFDDPEI 64
+ ++I N +G+RTTPS VAFT D ERL+G A+ Q N NT + KRLIGRRFDD +
Sbjct: 25 KVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVV 83
Query: 65 KKDMKNLSYKIV 76
+ DMK+ + +V
Sbjct: 84 QSDMKHWPFMVV 95
>pdb|3CQX|A Chain A, Chaperone Complex
pdb|3CQX|B Chain B, Chaperone Complex
Length = 386
Score = 76.3 bits (186), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Query: 5 QAKVIENSEGSRTTPSVVAFTKDGERLVGTPARRQAVTNSANTFYATKRLIGRRFDDPEI 64
+ ++I N +G+RTTPS VAFT D ERL+G A+ Q N NT + KRLIGRRFDD +
Sbjct: 30 KVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVV 88
Query: 65 KKDMKNLSYKIV 76
+ DMK+ + +V
Sbjct: 89 QSDMKHWPFMVV 100
>pdb|1HPM|A Chain A, How Potassium Affects The Activity Of The Molecular
Chaperone Hsc70. Ii. Potassium Binds Specifically In
The Atpase Active Site
pdb|1NGI|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
pdb|1NGJ|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
pdb|3HSC|A Chain A, Three-Dimensional Structure Of The Atpase Fragment Of A
70k Heat-Shock Cognate Protein
Length = 386
Score = 76.3 bits (186), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Query: 5 QAKVIENSEGSRTTPSVVAFTKDGERLVGTPARRQAVTNSANTFYATKRLIGRRFDDPEI 64
+ ++I N +G+RTTPS VAFT D ERL+G A+ Q N NT + KRLIGRRFDD +
Sbjct: 25 KVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVV 83
Query: 65 KKDMKNLSYKIV 76
+ DMK+ + +V
Sbjct: 84 QSDMKHWPFMVV 95
>pdb|1NGC|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
Length = 386
Score = 76.3 bits (186), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Query: 5 QAKVIENSEGSRTTPSVVAFTKDGERLVGTPARRQAVTNSANTFYATKRLIGRRFDDPEI 64
+ ++I N +G+RTTPS VAFT D ERL+G A+ Q N NT + KRLIGRRFDD +
Sbjct: 25 KVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVV 83
Query: 65 KKDMKNLSYKIV 76
+ DMK+ + +V
Sbjct: 84 QSDMKHWPFMVV 95
>pdb|1NGE|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
Length = 386
Score = 76.3 bits (186), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Query: 5 QAKVIENSEGSRTTPSVVAFTKDGERLVGTPARRQAVTNSANTFYATKRLIGRRFDDPEI 64
+ ++I N +G+RTTPS VAFT D ERL+G A+ Q N NT + KRLIGRRFDD +
Sbjct: 25 KVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVV 83
Query: 65 KKDMKNLSYKIV 76
+ DMK+ + +V
Sbjct: 84 QSDMKHWPFMVV 95
>pdb|1NGD|A Chain A, Structural Basis Of The 70-kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
Length = 386
Score = 76.3 bits (186), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Query: 5 QAKVIENSEGSRTTPSVVAFTKDGERLVGTPARRQAVTNSANTFYATKRLIGRRFDDPEI 64
+ ++I N +G+RTTPS VAFT D ERL+G A+ Q N NT + KRLIGRRFDD +
Sbjct: 25 KVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVV 83
Query: 65 KKDMKNLSYKIV 76
+ DMK+ + +V
Sbjct: 84 QSDMKHWPFMVV 95
>pdb|1NGF|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
Length = 386
Score = 76.3 bits (186), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Query: 5 QAKVIENSEGSRTTPSVVAFTKDGERLVGTPARRQAVTNSANTFYATKRLIGRRFDDPEI 64
+ ++I N +G+RTTPS VAFT D ERL+G A+ Q N NT + KRLIGRRFDD +
Sbjct: 25 KVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVV 83
Query: 65 KKDMKNLSYKIV 76
+ DMK+ + +V
Sbjct: 84 QSDMKHWPFMVV 95
>pdb|3C7N|B Chain B, Structure Of The Hsp110:hsc70 Nucleotide Exchange
Complex
Length = 554
Score = 76.3 bits (186), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Query: 5 QAKVIENSEGSRTTPSVVAFTKDGERLVGTPARRQAVTNSANTFYATKRLIGRRFDDPEI 64
+ ++I N +G+RTTPS VAFT D ERL+G A+ Q N NT + KRLIGRRFDD +
Sbjct: 25 KVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVV 83
Query: 65 KKDMKNLSYKIV 76
+ DMK+ + +V
Sbjct: 84 QSDMKHWPFMVV 95
>pdb|1NGH|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
Length = 386
Score = 76.3 bits (186), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Query: 5 QAKVIENSEGSRTTPSVVAFTKDGERLVGTPARRQAVTNSANTFYATKRLIGRRFDDPEI 64
+ ++I N +G+RTTPS VAFT D ERL+G A+ Q N NT + KRLIGRRFDD +
Sbjct: 25 KVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVV 83
Query: 65 KKDMKNLSYKIV 76
+ DMK+ + +V
Sbjct: 84 QSDMKHWPFMVV 95
>pdb|1BA0|A Chain A, Heat-Shock Cognate 70kd Protein 44kd Atpase N-Terminal
1nge 3
Length = 386
Score = 76.3 bits (186), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Query: 5 QAKVIENSEGSRTTPSVVAFTKDGERLVGTPARRQAVTNSANTFYATKRLIGRRFDDPEI 64
+ ++I N +G+RTTPS VAFT D ERL+G A+ Q N NT + KRLIGRRFDD +
Sbjct: 25 KVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVV 83
Query: 65 KKDMKNLSYKIV 76
+ DMK+ + +V
Sbjct: 84 QSDMKHWPFMVV 95
>pdb|1HX1|A Chain A, Crystal Structure Of A Bag Domain In Complex With The
Hsc70 Atpase Domain
Length = 400
Score = 76.3 bits (186), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Query: 5 QAKVIENSEGSRTTPSVVAFTKDGERLVGTPARRQAVTNSANTFYATKRLIGRRFDDPEI 64
+ ++I N +G+RTTPS VAFT D ERL+G A+ Q N NT + KRLIGRRFDD +
Sbjct: 44 KVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVV 102
Query: 65 KKDMKNLSYKIV 76
+ DMK+ + +V
Sbjct: 103 QSDMKHWPFMVV 114
>pdb|1BA1|A Chain A, Heat-Shock Cognate 70kd Protein 44kd Atpase N-Terminal
Mutant With Cys 17 Replaced By Lys
Length = 386
Score = 76.3 bits (186), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Query: 5 QAKVIENSEGSRTTPSVVAFTKDGERLVGTPARRQAVTNSANTFYATKRLIGRRFDDPEI 64
+ ++I N +G+RTTPS VAFT D ERL+G A+ Q N NT + KRLIGRRFDD +
Sbjct: 25 KVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVV 83
Query: 65 KKDMKNLSYKIV 76
+ DMK+ + +V
Sbjct: 84 QSDMKHWPFMVV 95
>pdb|2V7Z|A Chain A, Crystal Structure Of The 70-Kda Heat Shock Cognate
Protein From Rattus Norvegicus In Post-Atp Hydrolysis
State
pdb|2V7Z|B Chain B, Crystal Structure Of The 70-Kda Heat Shock Cognate
Protein From Rattus Norvegicus In Post-Atp Hydrolysis
State
Length = 543
Score = 76.3 bits (186), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Query: 5 QAKVIENSEGSRTTPSVVAFTKDGERLVGTPARRQAVTNSANTFYATKRLIGRRFDDPEI 64
+ ++I N +G+RTTPS VAFT D ERL+G A+ Q N NT + KRLIGRRFDD +
Sbjct: 25 KVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVV 83
Query: 65 KKDMKNLSYKIV 76
+ DMK+ + +V
Sbjct: 84 QSDMKHWPFMVV 95
>pdb|1S3X|A Chain A, The Crystal Structure Of The Human Hsp70 Atpase Domain
Length = 382
Score = 75.9 bits (185), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 54/78 (69%), Gaps = 3/78 (3%)
Query: 5 QAKVIENSEGSRTTPSVVAFTKDGERLVGTPARRQAVTNSANTFYATKRLIGRRFDDPEI 64
+ ++I N +G+RTTPS VAFT D ERL+G A+ Q N NT + KRLIGR+F DP +
Sbjct: 25 KVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVALNPQNTVFDAKRLIGRKFGDPVV 83
Query: 65 KKDMKNLSYKIVRASNGD 82
+ DMK+ ++++ ++GD
Sbjct: 84 QSDMKHWPFQVI--NDGD 99
>pdb|3A8Y|A Chain A, Crystal Structure Of The Complex Between The Bag5 Bd5 And
Hsp70 Nbd
pdb|3A8Y|B Chain B, Crystal Structure Of The Complex Between The Bag5 Bd5 And
Hsp70 Nbd
pdb|3ATU|A Chain A, Crystal Structure Of Human Hsp70 Nbd In The Adp- And Mg
Ion-Bound State
pdb|3ATV|A Chain A, Crystal Structure Of Human Hsp70 Nbd In The Adp-Bound And
Mg Ion-Free State
pdb|3AY9|A Chain A, Crystal Structure Of Human Hsp70 Nbd In The Adp-, Mg Ion-,
And K Ion- Bound State
Length = 392
Score = 75.9 bits (185), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 54/78 (69%), Gaps = 3/78 (3%)
Query: 5 QAKVIENSEGSRTTPSVVAFTKDGERLVGTPARRQAVTNSANTFYATKRLIGRRFDDPEI 64
+ ++I N +G+RTTPS VAFT D ERL+G A+ Q N NT + KRLIGR+F DP +
Sbjct: 29 KVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVALNPQNTVFDAKRLIGRKFGDPVV 87
Query: 65 KKDMKNLSYKIVRASNGD 82
+ DMK+ ++++ ++GD
Sbjct: 88 QSDMKHWPFQVI--NDGD 103
>pdb|3D2F|B Chain B, Crystal Structure Of A Complex Of Sse1p And Hsp70
pdb|3D2F|D Chain D, Crystal Structure Of A Complex Of Sse1p And Hsp70
Length = 382
Score = 75.9 bits (185), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 54/78 (69%), Gaps = 3/78 (3%)
Query: 5 QAKVIENSEGSRTTPSVVAFTKDGERLVGTPARRQAVTNSANTFYATKRLIGRRFDDPEI 64
+ ++I N +G+RTTPS VAFT D ERL+G A+ Q N NT + KRLIGR+F DP +
Sbjct: 25 KVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVALNPQNTVFDAKRLIGRKFGDPVV 83
Query: 65 KKDMKNLSYKIVRASNGD 82
+ DMK+ ++++ ++GD
Sbjct: 84 QSDMKHWPFQVI--NDGD 99
>pdb|2E8A|A Chain A, Crystal Structure Of The Human Hsp70 Atpase Domain In
Complex With Amp-Pnp
Length = 391
Score = 75.9 bits (185), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 54/78 (69%), Gaps = 3/78 (3%)
Query: 5 QAKVIENSEGSRTTPSVVAFTKDGERLVGTPARRQAVTNSANTFYATKRLIGRRFDDPEI 64
+ ++I N +G+RTTPS VAFT D ERL+G A+ Q N NT + KRLIGR+F DP +
Sbjct: 28 KVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVALNPQNTVFDAKRLIGRKFGDPVV 86
Query: 65 KKDMKNLSYKIVRASNGD 82
+ DMK+ ++++ ++GD
Sbjct: 87 QSDMKHWPFQVI--NDGD 102
>pdb|2E88|A Chain A, Crystal Structure Of The Human Hsp70 Atpase Domain In The
Apo Form
Length = 391
Score = 75.9 bits (185), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 54/78 (69%), Gaps = 3/78 (3%)
Query: 5 QAKVIENSEGSRTTPSVVAFTKDGERLVGTPARRQAVTNSANTFYATKRLIGRRFDDPEI 64
+ ++I N +G+RTTPS VAFT D ERL+G A+ Q N NT + KRLIGR+F DP +
Sbjct: 28 KVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVALNPQNTVFDAKRLIGRKFGDPVV 86
Query: 65 KKDMKNLSYKIVRASNGD 82
+ DMK+ ++++ ++GD
Sbjct: 87 QSDMKHWPFQVI--NDGD 102
>pdb|3JXU|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 1a
(Hsp70-1) Atpase Domain In Complex With Adp And
Inorganic Phosphate
Length = 409
Score = 75.5 bits (184), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 54/78 (69%), Gaps = 3/78 (3%)
Query: 5 QAKVIENSEGSRTTPSVVAFTKDGERLVGTPARRQAVTNSANTFYATKRLIGRRFDDPEI 64
+ ++I N +G+RTTPS VAFT D ERL+G A+ Q N NT + KRLIGR+F DP +
Sbjct: 47 KVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVALNPQNTVFDAKRLIGRKFGDPVV 105
Query: 65 KKDMKNLSYKIVRASNGD 82
+ DMK+ ++++ ++GD
Sbjct: 106 QSDMKHWPFQVI--NDGD 121
>pdb|1HJO|A Chain A, Atpase Domain Of Human Heat Shock 70kda Protein 1
Length = 380
Score = 75.5 bits (184), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 54/78 (69%), Gaps = 3/78 (3%)
Query: 5 QAKVIENSEGSRTTPSVVAFTKDGERLVGTPARRQAVTNSANTFYATKRLIGRRFDDPEI 64
+ ++I N +G+RTTPS VAFT D ERL+G A+ Q N NT + KRLIGR+F DP +
Sbjct: 23 KVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVALNPQNTVFDAKRLIGRKFGDPVV 81
Query: 65 KKDMKNLSYKIVRASNGD 82
+ DMK+ ++++ ++GD
Sbjct: 82 QSDMKHWPFQVI--NDGD 97
>pdb|3I33|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 2
(Hsp70-2) Atpase Domain In Complex With Adp And
Inorganic Phosphate
Length = 404
Score = 75.1 bits (183), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 50/72 (69%), Gaps = 1/72 (1%)
Query: 5 QAKVIENSEGSRTTPSVVAFTKDGERLVGTPARRQAVTNSANTFYATKRLIGRRFDDPEI 64
+ ++I N +G+RTTPS VAFT D ERL+G A+ Q N NT + KRLIGR+F+D +
Sbjct: 44 KVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPTNTIFDAKRLIGRKFEDATV 102
Query: 65 KKDMKNLSYKIV 76
+ DMK+ +++V
Sbjct: 103 QSDMKHWPFRVV 114
>pdb|1KAZ|A Chain A, 70kd Heat Shock Cognate Protein Atpase Domain, K71e
Mutant
Length = 381
Score = 74.7 bits (182), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Query: 5 QAKVIENSEGSRTTPSVVAFTKDGERLVGTPARRQAVTNSANTFYATKRLIGRRFDDPEI 64
+ ++I N +G+RTTPS VAFT D ERL+G A+ Q N NT + +RLIGRRFDD +
Sbjct: 25 KVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPTNTVFDAERLIGRRFDDAVV 83
Query: 65 KKDMKNLSYKIV 76
+ DMK+ + +V
Sbjct: 84 QSDMKHWPFMVV 95
>pdb|3GDQ|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein
1-Like Atpase Domain In Complex With Adp And Inorganic
Phosphate
Length = 408
Score = 74.3 bits (181), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 50/72 (69%), Gaps = 1/72 (1%)
Query: 5 QAKVIENSEGSRTTPSVVAFTKDGERLVGTPARRQAVTNSANTFYATKRLIGRRFDDPEI 64
+ ++I N +G+RTTPS VAFT D ERL+G A+ Q N NT + KRLIGR+F+DP +
Sbjct: 49 KVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPQNTVFDAKRLIGRKFNDPVV 107
Query: 65 KKDMKNLSYKIV 76
+ DMK ++++
Sbjct: 108 QADMKLWPFQVI 119
>pdb|1KAY|A Chain A, 70kd Heat Shock Cognate Protein Atpase Domain, K71a
Mutant
Length = 381
Score = 74.3 bits (181), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 5 QAKVIENSEGSRTTPSVVAFTKDGERLVGTPARRQAVTNSANTFYATKRLIGRRFDDPEI 64
+ ++I N +G+RTTPS VAFT D ERL+G A+ Q N NT + RLIGRRFDD +
Sbjct: 25 KVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPTNTVFDAARLIGRRFDDAVV 83
Query: 65 KKDMKNLSYKIV 76
+ DMK+ + +V
Sbjct: 84 QSDMKHWPFMVV 95
>pdb|1KAX|A Chain A, 70kd Heat Shock Cognate Protein Atpase Domain, K71m
Mutant
Length = 381
Score = 74.3 bits (181), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 5 QAKVIENSEGSRTTPSVVAFTKDGERLVGTPARRQAVTNSANTFYATKRLIGRRFDDPEI 64
+ ++I N +G+RTTPS VAFT D ERL+G A+ Q N NT + RLIGRRFDD +
Sbjct: 25 KVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPTNTVFDAMRLIGRRFDDAVV 83
Query: 65 KKDMKNLSYKIV 76
+ DMK+ + +V
Sbjct: 84 QSDMKHWPFMVV 95
>pdb|3FE1|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 6
(Hsp70b') Atpase Domain In Complex With Adp And
Inorganic Phosphate
pdb|3FE1|B Chain B, Crystal Structure Of The Human 70kda Heat Shock Protein 6
(Hsp70b') Atpase Domain In Complex With Adp And
Inorganic Phosphate
pdb|3FE1|C Chain C, Crystal Structure Of The Human 70kda Heat Shock Protein 6
(Hsp70b') Atpase Domain In Complex With Adp And
Inorganic Phosphate
Length = 403
Score = 73.9 bits (180), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 49/70 (70%), Gaps = 1/70 (1%)
Query: 7 KVIENSEGSRTTPSVVAFTKDGERLVGTPARRQAVTNSANTFYATKRLIGRRFDDPEIKK 66
+++ N +G+RTTPS VAFT D ERLVG A+ QA N NT + KRLIGR+F D ++
Sbjct: 47 EILANDQGNRTTPSYVAFT-DTERLVGDAAKSQAALNPHNTVFDAKRLIGRKFADTTVQS 105
Query: 67 DMKNLSYKIV 76
DMK+ +++V
Sbjct: 106 DMKHWPFRVV 115
>pdb|1QQN|A Chain A, D206s Mutant Of Bovine 70 Kilodalton Heat Shock Protein
Length = 378
Score = 73.9 bits (180), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 5 QAKVIENSEGSRTTPSVVAFTKDGERLVGTPARRQAVTNSANTFYATKRLIGRRFDDPEI 64
+ ++I N +G+RTTPS VAFT D ERL+G A+ Q N NT + KRLIGR FDD +
Sbjct: 22 KVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRAFDDAVV 80
Query: 65 KKDMKNLSYKIV 76
+ DMK+ + +V
Sbjct: 81 QSDMKHWPFMVV 92
>pdb|3KVG|A Chain A, Crystal Structure Of The N-Terminal Domain Of Hsp70
(Cgd2_20) From Cryptosporidium Parvum In Complex With
Amppnp
pdb|3KVG|B Chain B, Crystal Structure Of The N-Terminal Domain Of Hsp70
(Cgd2_20) From Cryptosporidium Parvum In Complex With
Amppnp
pdb|3L4I|A Chain A, Crystal Structure Of The N-Terminal Domain Of Hsp70
(Cgd2_20) From Cryptosporidium Parvum In Complex With
Adp And Inorganic Phosphate
pdb|3L4I|B Chain B, Crystal Structure Of The N-Terminal Domain Of Hsp70
(Cgd2_20) From Cryptosporidium Parvum In Complex With
Adp And Inorganic Phosphate
pdb|3L6Q|A Chain A, Crystal Structure Of The N-Terminal Domain Of Hsp70 From
Cryptosporidium Parvum (Cgd2_20)
pdb|3L6Q|B Chain B, Crystal Structure Of The N-Terminal Domain Of Hsp70 From
Cryptosporidium Parvum (Cgd2_20)
Length = 400
Score = 73.6 bits (179), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Query: 8 VIENSEGSRTTPSVVAFTKDGERLVGTPARRQAVTNSANTFYATKRLIGRRFDDPEIKKD 67
++ N +G+RTTPS VAFT+ ERL+G A+ Q N NT + KRLIGR+FDD ++ D
Sbjct: 43 IVPNDQGNRTTPSYVAFTET-ERLIGDAAKNQVARNPENTVFDAKRLIGRKFDDQAVQSD 101
Query: 68 MKNLSYKIVRA 78
M + +K+VR
Sbjct: 102 MTHWPFKVVRG 112
>pdb|3D2E|B Chain B, Crystal Structure Of A Complex Of Sse1p And Hsp70,
Selenomethionine- Labeled Crystals
pdb|3D2E|D Chain D, Crystal Structure Of A Complex Of Sse1p And Hsp70,
Selenomethionine- Labeled Crystals
Length = 382
Score = 72.8 bits (177), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 53/78 (67%), Gaps = 3/78 (3%)
Query: 5 QAKVIENSEGSRTTPSVVAFTKDGERLVGTPARRQAVTNSANTFYATKRLIGRRFDDPEI 64
+ ++I N +G+RTTPS VAFT D ERL+G A+ Q N NT + KRLIGR+F DP +
Sbjct: 25 KVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVALNPQNTVFDAKRLIGRKFGDPVV 83
Query: 65 KKDMKNLSYKIVRASNGD 82
+ D K+ ++++ ++GD
Sbjct: 84 QSDXKHWPFQVI--NDGD 99
>pdb|4FSV|A Chain A, Crystal Structure Of A Heat Shock 70kda Protein 2
(Hspa2) From Homo Sapiens At 1.80 A Resolution
Length = 387
Score = 72.0 bits (175), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Query: 5 QAKVIENSEGSRTTPSVVAFTKDGERLVGTPARRQAVTNSANTFYATKRLIGRRFDDPEI 64
+ ++I N +G+RTTPS VAFT D ERL+G A+ Q N NT + KRLIGR+F+D +
Sbjct: 26 KVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAXNPTNTIFDAKRLIGRKFEDATV 84
Query: 65 KKDMKNLSYKIV 76
+ D K+ +++V
Sbjct: 85 QSDXKHWPFRVV 96
>pdb|3QFP|A Chain A, Crystal Structure Of Yeast Hsp70 (BipKAR2) ATPASE DOMAIN
pdb|3QML|A Chain A, The Structural Analysis Of Sil1-Bip Complex Reveals The
Mechanism For Sil1 To Function As A Novel Nucleotide
Exchange Factor
pdb|3QML|B Chain B, The Structural Analysis Of Sil1-Bip Complex Reveals The
Mechanism For Sil1 To Function As A Novel Nucleotide
Exchange Factor
Length = 390
Score = 71.2 bits (173), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 51/76 (67%), Gaps = 1/76 (1%)
Query: 1 MEGKQAKVIENSEGSRTTPSVVAFTKDGERLVGTPARRQAVTNSANTFYATKRLIGRRFD 60
M+ + +++ N +G+R TPS VAFT D ERL+G A+ Q N NT + KRLIG +++
Sbjct: 31 MKNGKTEILANEQGNRITPSYVAFTDD-ERLIGDAAKNQVAANPQNTIFDIKRLIGLKYN 89
Query: 61 DPEIKKDMKNLSYKIV 76
D ++KD+K+L + +V
Sbjct: 90 DRSVQKDIKHLPFNVV 105
>pdb|3QFU|A Chain A, Crystal Structure Of Yeast Hsp70 (BipKAR2) COMPLEXED WITH
ADP
Length = 394
Score = 71.2 bits (173), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 51/76 (67%), Gaps = 1/76 (1%)
Query: 1 MEGKQAKVIENSEGSRTTPSVVAFTKDGERLVGTPARRQAVTNSANTFYATKRLIGRRFD 60
M+ + +++ N +G+R TPS VAFT D ERL+G A+ Q N NT + KRLIG +++
Sbjct: 35 MKNGKTEILANEQGNRITPSYVAFTDD-ERLIGDAAKNQVAANPQNTIFDIKRLIGLKYN 93
Query: 61 DPEIKKDMKNLSYKIV 76
D ++KD+K+L + +V
Sbjct: 94 DRSVQKDIKHLPFNVV 109
>pdb|2V7Y|A Chain A, Crystal Structure Of The Molecular Chaperone Dnak From
Geobacillus Kaustophilus Hta426 In Post-Atp Hydrolysis
State
pdb|4ANI|C Chain C, Structural Basis For The Intermolecular Communication
Between Dnak And Grpe In The Dnak Chaperone System From
Geobacillus Kaustophilus Hta426
pdb|4ANI|D Chain D, Structural Basis For The Intermolecular Communication
Between Dnak And Grpe In The Dnak Chaperone System From
Geobacillus Kaustophilus Hta426
pdb|4ANI|G Chain G, Structural Basis For The Intermolecular Communication
Between Dnak And Grpe In The Dnak Chaperone System From
Geobacillus Kaustophilus Hta426
pdb|4ANI|H Chain H, Structural Basis For The Intermolecular Communication
Between Dnak And Grpe In The Dnak Chaperone System From
Geobacillus Kaustophilus Hta426
Length = 509
Score = 65.1 bits (157), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 35/59 (59%), Positives = 44/59 (74%), Gaps = 2/59 (3%)
Query: 1 MEGKQAKVIENSEGSRTTPSVVAFTKDGERLVGTPARRQAVTNSANTFYATKRLIGRRF 59
+EG + KVI N EG+RTTPSVVAF K+GERLVG A+RQA+TN NT + KR +G +
Sbjct: 19 LEGGEVKVIPNPEGNRTTPSVVAF-KNGERLVGEVAKRQAITNP-NTIISIKRHMGTDY 75
>pdb|3C7N|A Chain A, Structure Of The Hsp110:hsc70 Nucleotide Exchange
Complex
Length = 668
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query: 8 VIENSEGSRTTPSVVAFTKDGERLVGTPARRQAVTNSANTFYATKRLIGRRFDDPEIKKD 67
++ N +R+TPSVV F R +G + + +N NT KR+IG + P+ +++
Sbjct: 28 IVVNEVSNRSTPSVVGFGPKN-RYLGETGKNKQTSNIKNTVANLKRIIGLDYHHPDFEQE 86
Query: 68 MKNLSYKIVR 77
K+ + K+V
Sbjct: 87 SKHFTSKLVE 96
>pdb|2QXL|A Chain A, Crystal Structure Analysis Of Sse1, A Yeast Hsp110
pdb|2QXL|B Chain B, Crystal Structure Analysis Of Sse1, A Yeast Hsp110
Length = 658
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 8 VIENSEGSRTTPSVVAFTKDGERLVGTPARRQAVTNSANTFYATKRLIGRRFDDPEIKKD 67
++ N +R+TPSVV F R +G + + +N NT KR+IG + P+ +++
Sbjct: 25 IVVNEVSNRSTPSVVGFGPKN-RYLGETGKNKQTSNIKNTVANLKRIIGLDYHHPDFEQE 83
Query: 68 MKNLSYKIVRASN 80
K+ + K+V +
Sbjct: 84 SKHFTSKLVELDD 96
>pdb|3D2F|A Chain A, Crystal Structure Of A Complex Of Sse1p And Hsp70
pdb|3D2F|C Chain C, Crystal Structure Of A Complex Of Sse1p And Hsp70
Length = 675
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query: 8 VIENSEGSRTTPSVVAFTKDGERLVGTPARRQAVTNSANTFYATKRLIGRRFDDPEIKKD 67
++ N +R+TPSVV F R +G + + +N NT KR+IG + P+ +++
Sbjct: 26 IVVNEVSNRSTPSVVGFGPKN-RYLGETGKNKQTSNIKNTVANLKRIIGLDYHHPDFEQE 84
Query: 68 MKNLSYKIVR 77
K+ + K+V
Sbjct: 85 SKHFTSKLVE 94
>pdb|3D2E|A Chain A, Crystal Structure Of A Complex Of Sse1p And Hsp70,
Selenomethionine- Labeled Crystals
pdb|3D2E|C Chain C, Crystal Structure Of A Complex Of Sse1p And Hsp70,
Selenomethionine- Labeled Crystals
Length = 675
Score = 40.4 bits (93), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 8 VIENSEGSRTTPSVVAFTKDGERLVGTPARRQAVTNSANTFYATKRLIGRRFDDPEIKKD 67
++ N +R+TPSVV F R +G + + +N NT KR+IG + P+ +++
Sbjct: 26 IVVNEVSNRSTPSVVGFGPKN-RYLGETGKNKQTSNIKNTVANLKRIIGLDYHHPDFEQE 84
Query: 68 MKNLSYKIVRASN 80
K+ + K+V +
Sbjct: 85 SKHFTSKLVELDD 97
>pdb|4GNI|A Chain A, Structure Of The Ssz1 Atpase Bound To Atp And Magnesium
pdb|4GNI|B Chain B, Structure Of The Ssz1 Atpase Bound To Atp And Magnesium
Length = 409
Score = 33.9 bits (76), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 5 QAKVIENSEGSRTTPSVVAFTKDGERLVGTPARRQAVTNSANTFYATKRLIGRRF 59
+A+VI N +G R P+++++ DG+ G A+ V N NT + ++G+ F
Sbjct: 34 KAEVIANEDGDRQIPTILSYV-DGDEYYGQQAKNFLVRNPKNTVAYFRDILGQDF 87
>pdb|3KS7|A Chain A, Crystal Structure Of Putative Peptide:n-Glycosidase F
(Pngase F) (Yp_210507.1) From Bacteroides Fragilis Nctc
9343 At 2.30 A Resolution
pdb|3KS7|B Chain B, Crystal Structure Of Putative Peptide:n-Glycosidase F
(Pngase F) (Yp_210507.1) From Bacteroides Fragilis Nctc
9343 At 2.30 A Resolution
pdb|3KS7|C Chain C, Crystal Structure Of Putative Peptide:n-Glycosidase F
(Pngase F) (Yp_210507.1) From Bacteroides Fragilis Nctc
9343 At 2.30 A Resolution
pdb|3KS7|D Chain D, Crystal Structure Of Putative Peptide:n-Glycosidase F
(Pngase F) (Yp_210507.1) From Bacteroides Fragilis Nctc
9343 At 2.30 A Resolution
Length = 397
Score = 28.1 bits (61), Expect = 1.3, Method: Composition-based stats.
Identities = 13/32 (40%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Query: 53 RLIGRRFDDPEIKKDMKNLSYKIVRASNGDAW 84
R+I ++ PE K+++ ++S K+ ASNGD W
Sbjct: 50 RIILKKITLPEYKRNV-SVSLKVTLASNGDRW 80
>pdb|2C8S|A Chain A, Cytochrome Cl From Methylobacterium Extorquens
Length = 172
Score = 25.8 bits (55), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 3 GKQAKVIENSEGSRTTPSVVAFTKDGERL 31
G+ V + EG R TP+V F + GE L
Sbjct: 18 GEALDVSQGKEGGRDTPAVKKFLETGENL 46
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.314 0.130 0.365
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,002,557
Number of Sequences: 62578
Number of extensions: 103316
Number of successful extensions: 309
Number of sequences better than 100.0: 59
Number of HSP's better than 100.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 201
Number of HSP's gapped (non-prelim): 61
length of query: 103
length of database: 14,973,337
effective HSP length: 68
effective length of query: 35
effective length of database: 10,718,033
effective search space: 375131155
effective search space used: 375131155
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 45 (21.9 bits)