Query psy3917
Match_columns 295
No_of_seqs 111 out of 1085
Neff 4.5
Searched_HMMs 46136
Date Fri Aug 16 20:41:29 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3917.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/3917hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0104 PurA Adenylosuccinate 100.0 3E-104 7E-109 766.0 20.1 251 41-292 1-373 (430)
2 TIGR00184 purA adenylosuccinat 100.0 1E-100 3E-105 748.0 22.3 246 45-292 1-368 (425)
3 PRK13786 adenylosuccinate synt 100.0 3E-100 7E-105 744.6 24.3 247 43-292 2-371 (424)
4 PRK13787 adenylosuccinate synt 100.0 4E-100 9E-105 743.8 23.2 247 41-292 1-370 (423)
5 PLN02513 adenylosuccinate synt 100.0 9E-100 2E-104 742.7 23.4 249 42-292 3-374 (427)
6 PRK13784 adenylosuccinate synt 100.0 1E-99 2E-104 742.1 23.4 248 41-292 1-371 (428)
7 PTZ00350 adenylosuccinate synt 100.0 1.5E-99 3E-104 742.6 23.8 257 34-292 5-383 (436)
8 PRK01117 adenylosuccinate synt 100.0 8E-100 2E-104 744.1 22.0 250 41-292 1-372 (430)
9 cd03108 AdSS Adenylosuccinate 100.0 4E-99 9E-104 725.0 22.7 247 44-292 2-319 (363)
10 smart00788 Adenylsucc_synt Ade 100.0 1.3E-98 3E-103 734.5 22.2 248 43-292 1-370 (421)
11 PRK13783 adenylosuccinate synt 100.0 2.2E-98 5E-103 728.3 23.7 246 43-292 2-361 (404)
12 PRK13785 adenylosuccinate synt 100.0 2E-97 4E-102 729.5 22.4 245 43-292 2-395 (454)
13 PF00709 Adenylsucc_synt: Aden 100.0 3.2E-97 7E-102 725.2 17.6 248 43-292 1-370 (421)
14 PRK13788 adenylosuccinate synt 100.0 5E-92 1.1E-96 683.8 22.9 230 41-280 1-354 (404)
15 KOG1355|consensus 100.0 2E-91 4.4E-96 664.7 15.7 257 36-293 24-403 (455)
16 PTZ00351 adenylosuccinate synt 100.0 4.1E-88 9E-93 675.0 22.1 247 38-293 166-654 (710)
17 PRK04293 adenylosuccinate synt 100.0 2.9E-82 6.2E-87 602.2 16.3 206 41-257 1-287 (333)
18 PF13316 DUF4087: Protein of u 70.3 1.3 2.7E-05 36.9 -0.3 11 224-234 6-16 (101)
19 KOG1014|consensus 50.7 6.5 0.00014 38.5 0.7 36 172-207 59-94 (312)
20 KOG0176|consensus 36.1 49 0.0011 31.1 3.9 61 44-114 116-176 (241)
21 KOG2692|consensus 33.0 35 0.00075 33.9 2.7 35 46-89 166-200 (376)
22 COG1419 FlhF Flagellar GTP-bin 32.7 10 0.00022 38.4 -1.1 48 240-293 336-390 (407)
23 PRK11372 lysozyme inhibitor; P 31.0 49 0.0011 27.5 2.9 39 57-98 30-70 (109)
24 COG0800 Eda 2-keto-3-deoxy-6-p 28.9 57 0.0012 30.4 3.2 68 105-193 64-133 (211)
25 COG3040 Blc Bacterial lipocali 27.2 1.5E+02 0.0032 27.1 5.3 77 54-133 87-163 (174)
26 PF09864 MliC: Membrane-bound 26.2 63 0.0014 24.0 2.5 38 62-99 1-39 (72)
27 COG0552 FtsY Signal recognitio 26.0 37 0.0008 33.8 1.5 36 233-269 275-310 (340)
28 TIGR01563 gp16_SPP1 phage head 24.5 1.4E+02 0.003 22.9 4.2 26 68-93 57-82 (101)
29 PF09356 Phage_BR0599: Phage c 21.4 1.9E+02 0.0041 22.6 4.4 43 70-112 8-53 (80)
No 1
>COG0104 PurA Adenylosuccinate synthase [Nucleotide transport and metabolism]
Probab=100.00 E-value=3.1e-104 Score=765.98 Aligned_cols=251 Identities=52% Similarity=0.876 Sum_probs=242.3
Q ss_pred ceEEEEEcCCcccCCchhhHHhhccCCcEEEecCCCCCCccEEEECCEEEEEeeccceeecCCceeEEcCCeEechHHHH
Q psy3917 41 HKVTVVLGAQWGDEGKGKVVDMLAVDADLVCRCQGGNNAGHTVVVDSTEYDFHLVPSGIINPKAKSIIGNGVVIHLPGLF 120 (295)
Q Consensus 41 m~~~vVvG~QwGDEGKGKivD~La~~~dvVvRfnGG~NAGHTVv~~g~k~~l~llPSGil~~~~~~~IG~GvVvdp~~l~ 120 (295)
|++++|||+|||||||||||||||.++|+|||||||+||||||+++|++|+|||||||+++|++.++|||||||||++|+
T Consensus 1 m~~~VVvG~QWGDEGKGKIvD~L~~~~d~VvR~qGG~NAGHTvvv~g~~~~LhLiPSGil~~~~~~vIGnGvVvdP~~L~ 80 (430)
T COG0104 1 MMNVVVVGAQWGDEGKGKIVDYLADRADVVVRYQGGHNAGHTVVVNGEKYKLHLIPSGILRPGATLVIGNGVVVDPEVLL 80 (430)
T ss_pred CceEEEEeCccccCCCceeeeeeccCcCEEEEccCCCCCCcEEEECCEEEEEEeccccccCCCceEEEcCcEEECHHHHH
Confidence 67899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCCEEEeCCceecchhhhhhhchhhhhhCCCCcCCCCCCccccccccccccCceeeeccCChhhhh
Q psy3917 121 DELQKNENKGLTGWKDRLLISDRAHLVFDFHQQVDGLQEAEKGKKSLGTTKKGIGPAYSSKATRNGIRIADLLGDFNVFT 200 (295)
Q Consensus 121 ~Ei~~L~~~G~~~~~~rL~Is~rAhli~p~H~~lD~~~E~~~g~~~IGTTg~GIGpay~dK~~R~giRv~DL~~~~~~~~ 200 (295)
+||+.|+++|+....+||+||+|||||+|||+++|+++|..++.++||||||||||||+||++|+|||++||+ |++.|+
T Consensus 81 ~Ei~~L~~~g~~~~~~rL~Is~~ahlIlpyH~~lD~~~E~~~~~~kIGTTgrGIGPaY~DKv~R~giRv~DL~-d~~~l~ 159 (430)
T COG0104 81 KEIEELEERGVDVVRDRLRISDRAHLILPYHIELDRAREKALGKKKIGTTGRGIGPAYEDKVARRGIRVGDLL-DPETLR 159 (430)
T ss_pred HHHHHHHhcCCccccccEEEccCcccccHHHHHHhhhhhhhcCCCcccCCCCccChhhhhhHhhhhhhhhhhc-CHHHHH
Confidence 9999999999987668999999999999999999999998888889999999999999999999999999999 545443
Q ss_pred c-------------------------------------------------------------------------------
Q psy3917 201 E------------------------------------------------------------------------------- 201 (295)
Q Consensus 201 ~------------------------------------------------------------------------------- 201 (295)
+
T Consensus 160 ~kle~~~~~~n~~l~~~y~~~~~~~~~~~~~~~~~~~~l~~~v~D~~~~l~~a~~~g~~VLfEGAQG~lLDidhGTYPyV 239 (430)
T COG0104 160 EKLERLLEYKNFQLVKYYGAEAVDFEDILDEYYEYAERLKPYVTDVSVLLNDALDAGKRVLFEGAQGTLLDIDHGTYPYV 239 (430)
T ss_pred HHHHHHHHHHHHHHHHhcCcccccHHHHHHHHHHHHHhhcchhhhhHHHHHHHHHcCCeEEEEcCccceecccCCcCccc
Confidence 3
Q ss_pred -------------------------------------------ccchHhHHHhhcCCccccccCCccccccchHHHHHHh
Q psy3917 202 -------------------------------------------KDSEIGDKLQRIGNEVGVTTKRKRRCGWLDIPLLKYT 238 (295)
Q Consensus 202 -------------------------------------------l~~e~g~~lr~~G~E~Gt~TgRpRR~GwlD~~~lrya 238 (295)
+++|+|++|++.|+||||||||||||||||++++|||
T Consensus 240 TSSNttagg~~~gsGvgP~~i~~ViGV~KAYtTRVG~GPFPTEl~de~ge~l~~~G~EyGttTGR~RRcGWfD~v~~r~A 319 (430)
T COG0104 240 TSSNTTAGGVATGSGVGPTKIDYVIGVFKAYTTRVGEGPFPTELFDEVGEKLREVGHEYGTTTGRPRRCGWFDAVLLRYA 319 (430)
T ss_pred ccCCcchhheeccCCCCccccceEEEEEEEeeccccCCCCCcccchHHHHHHhhcCceecccCCCCccccchhHHHHHHH
Confidence 7788999999999999999999999999999999999
Q ss_pred hHhcCcceEEeecccccCCCCceeEEEEEeeCCEEeecCCCCccccCCcEEEEE
Q psy3917 239 SMVNGYTKLCITKLDILDTFEEIKIGVAYKRHGKTLHYFPSNSSELAKVEYYVL 292 (295)
Q Consensus 239 ~~ing~~~lalTklDvL~~~~~ikic~~Y~~~G~~~~~~P~~~~~l~~~epvy~ 292 (295)
+++||+|++||||||+|++|++||||++|++||+++++||+++++|++|+|+|.
T Consensus 320 ~~iNG~t~laiTKlDvLdgl~~ikiCv~Y~~dG~~id~~P~~~~~~~~~~PiYe 373 (430)
T COG0104 320 VRINGITGLAITKLDVLDGLDEIKICVAYEIDGKRIDYFPADLDDLARCEPIYE 373 (430)
T ss_pred HhhcCccceeeeeeehhcCCCcceeEEEEecCCceeeecccchhhhhcCceeee
Confidence 999999999999999999999999999999999999999999999999999995
No 2
>TIGR00184 purA adenylosuccinate synthase. Alternate name IMP--aspartate ligase.
Probab=100.00 E-value=1.2e-100 Score=747.99 Aligned_cols=246 Identities=48% Similarity=0.853 Sum_probs=235.5
Q ss_pred EEEcCCcccCCchhhHHhhccCCcEEEecCCCCCCccEEEECCEEEEEeeccceeecCCceeEEcCCeEechHHHHHHHH
Q psy3917 45 VVLGAQWGDEGKGKVVDMLAVDADLVCRCQGGNNAGHTVVVDSTEYDFHLVPSGIINPKAKSIIGNGVVIHLPGLFDELQ 124 (295)
Q Consensus 45 vVvG~QwGDEGKGKivD~La~~~dvVvRfnGG~NAGHTVv~~g~k~~l~llPSGil~~~~~~~IG~GvVvdp~~l~~Ei~ 124 (295)
+|||+|||||||||||||||+++|+|||||||+||||||+++|+||+|||||||+|+|++.|+||||||+||++|++||+
T Consensus 1 vVvG~QwGDEGKGKivD~La~~~d~VvR~~GG~NAGHTVv~~g~k~~lhliPSGil~~~~~~vIG~GvVidp~~l~~Ei~ 80 (425)
T TIGR00184 1 VVVGGQWGDEGKGKIVDLLADKPDIVARYQGGHNAGHTIVIDGVKYGLHLIPSGFLYPDAKLLIGNGVVVDPEVLLKEME 80 (425)
T ss_pred CeEcCccCCCCCchhehhhccCCCEEEEcCCcCCCCcEEEECCEEEEEEecCccccCCCceEEECCeEEEcHHHHHHHHH
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCCCCCCCCEEEeCCceecchhhhhhhchhhhhhCCCCcCCCCCCccccccccccccCceeeeccCChhhhhc---
Q psy3917 125 KNENKGLTGWKDRLLISDRAHLVFDFHQQVDGLQEAEKGKKSLGTTKKGIGPAYSSKATRNGIRIADLLGDFNVFTE--- 201 (295)
Q Consensus 125 ~L~~~G~~~~~~rL~Is~rAhli~p~H~~lD~~~E~~~g~~~IGTTg~GIGpay~dK~~R~giRv~DL~~~~~~~~~--- 201 (295)
+|+++|++ +.+||+||+|||||+|||+++|+++|..++..+||||||||||||+||++|+|||++||++ ++.|.+
T Consensus 81 ~L~~~g~~-~~~rL~Is~rahli~p~H~~lD~~~E~~~g~~~IGTT~rGIGPaY~dK~~R~giR~~Dl~~-~~~~~~kl~ 158 (425)
T TIGR00184 81 YLEKRGIS-VRDRLFVSYRCHLILPYHKKLDKAREKSKLAKKIGTTGKGIGPAYEDKVARSGLRVGDLLD-DEAFAEKAK 158 (425)
T ss_pred HHHHcCCC-CCCCEEEeCCCCCCCCchHHHHHHhHHhcCCCCcCCCCCCcHHHHHHHhhccccchhhhcC-HHHHHHHHH
Confidence 99999995 4579999999999999999999999999999999999999999999999999999999994 332211
Q ss_pred --------------------------------------------------------------------------------
Q psy3917 202 -------------------------------------------------------------------------------- 201 (295)
Q Consensus 202 -------------------------------------------------------------------------------- 201 (295)
T Consensus 159 ~~~~~~n~~~~~~y~~~~~~~~~~~~~~~~~~~~l~p~v~D~~~~l~~a~~~gk~vLfEGAQG~lLDid~GtYPfVTSS~ 238 (425)
T TIGR00184 159 NILEYLNEQLVKYYKDEGVDYEKKLDEYMKYAEELKPFVVDVSVELNEALDEGEKVLFEGAQGTMLDIDYGTYPYVTSSN 238 (425)
T ss_pred HHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHCCCeEEEEcchhhhhhhccCcCcCccCcC
Confidence
Q ss_pred ---------------------------------------ccchHhHHHhhcCCccccccCCccccccchHHHHHHhhHhc
Q psy3917 202 ---------------------------------------KDSEIGDKLQRIGNEVGVTTKRKRRCGWLDIPLLKYTSMVN 242 (295)
Q Consensus 202 ---------------------------------------l~~e~g~~lr~~G~E~Gt~TgRpRR~GwlD~~~lrya~~in 242 (295)
+++|+++.||++|+||||||||||||||||++++|||+++|
T Consensus 239 t~agg~~~g~Gi~p~~i~~ViGV~KAYtTRVG~GPFPTEl~~e~g~~lr~~g~E~GttTGRpRR~GwlD~v~lrya~~in 318 (425)
T TIGR00184 239 TTAGGVATGVGIGPTKVDEVIGVFKAYTTRVGAGPFPTELSDEEGEKLGTKGAEFGTTTGRRRRCGWFDLVAARYACRLN 318 (425)
T ss_pred ChHHHHHhccCCCccccceEEEEEEeccccccCCCCCcccchhHHHHHHhccCcccCcCCCCceeecchHHHHHHHHHHc
Confidence 56788999999999999999999999999999999999999
Q ss_pred CcceEEeecccccCCCCceeEEEEEeeCCEEeecCCCCccccCCcEEEEE
Q psy3917 243 GYTKLCITKLDILDTFEEIKIGVAYKRHGKTLHYFPSNSSELAKVEYYVL 292 (295)
Q Consensus 243 g~~~lalTklDvL~~~~~ikic~~Y~~~G~~~~~~P~~~~~l~~~epvy~ 292 (295)
|+|+||||||||||+|++||||++|+++|+.+++||++++.|++|||+|.
T Consensus 319 g~t~lalTkLDvL~~~~~ikic~~Y~~~g~~~~~~P~~~~~l~~~~PvYe 368 (425)
T TIGR00184 319 GATQLALTKLDVLDGIDEIKVCVAYRMKGEILELFPLDLKDLKGVEPIYE 368 (425)
T ss_pred CCCeEEEecccccCCCCeeeEEEEEeeCCEEeeeCCCChhhhcccEEEEE
Confidence 99999999999999999999999999999999999999999999999996
No 3
>PRK13786 adenylosuccinate synthetase; Provisional
Probab=100.00 E-value=3.4e-100 Score=744.60 Aligned_cols=247 Identities=43% Similarity=0.748 Sum_probs=234.8
Q ss_pred EEEEEcCCcccCCchhhHHhhccCCcEEEecCCCCCCccEEEECCEEEEEeeccceeecCCceeEEcCCeEechHHHHHH
Q psy3917 43 VTVVLGAQWGDEGKGKVVDMLAVDADLVCRCQGGNNAGHTVVVDSTEYDFHLVPSGIINPKAKSIIGNGVVIHLPGLFDE 122 (295)
Q Consensus 43 ~~vVvG~QwGDEGKGKivD~La~~~dvVvRfnGG~NAGHTVv~~g~k~~l~llPSGil~~~~~~~IG~GvVvdp~~l~~E 122 (295)
+++|||+|||||||||||||||+++|+|||||||+||||||+++++||+|||||||+|+++ .|+|||||||||+.|++|
T Consensus 2 ~~vVvG~QwGDEGKGKivD~La~~~d~VvR~qGG~NAGHTVv~~g~k~~lhliPSGil~~~-~~vIG~GvVidp~~L~~E 80 (424)
T PRK13786 2 FTIITGAQFGDEGKGKIVDLLAKDYDIVARFQGGDNAGHTVKVGDEVYKLHLIPSGFLLDA-RVLIGPGVVLNPEVLAEE 80 (424)
T ss_pred eEEEEecCcCCCCCchhhhhhhcCCCEEEECCCcCCCCcEEEECCEEEEEEecCceecCCC-ceEECCCEEEcHHHHHHH
Confidence 6899999999999999999999999999999999999999999999999999999999987 999999999999999999
Q ss_pred HHHHHhCCCCCCCCCEEEeCCceecchhhhhhhchhhhhhCCCCcCCCCCCccccccccccccCceeeeccCChhhhhc-
Q psy3917 123 LQKNENKGLTGWKDRLLISDRAHLVFDFHQQVDGLQEAEKGKKSLGTTKKGIGPAYSSKATRNGIRIADLLGDFNVFTE- 201 (295)
Q Consensus 123 i~~L~~~G~~~~~~rL~Is~rAhli~p~H~~lD~~~E~~~g~~~IGTTg~GIGpay~dK~~R~giRv~DL~~~~~~~~~- 201 (295)
|++|+++|++...+||+||+|||||+|||+.+|+++|..++ ++||||||||||||+||++|.|||++||++ ++.|++
T Consensus 81 i~~L~~~Gv~~~~~rL~Is~rahli~P~H~~lD~~~E~~~g-~~IGTT~rGIGPaY~DK~~R~giR~~Dl~~-~~~~~~k 158 (424)
T PRK13786 81 IDMLEKHGVKVDAEKLGIDAKTSIIMPYHIELDGLRESART-EKIGTTKRGIGFAYIDKIARDEVRMSDLVD-KERLMRR 158 (424)
T ss_pred HHHHHHCCCCCCcCcEEEcCCCCcCChHHHHHhhhhHHhcC-CCCCCCCCCchHhHHHHhhCccceeehhcC-HHHHHHH
Confidence 99999999964347999999999999999999999999998 899999999999999999999999999984 332211
Q ss_pred --------------------------------------------------------------------------------
Q psy3917 202 -------------------------------------------------------------------------------- 201 (295)
Q Consensus 202 -------------------------------------------------------------------------------- 201 (295)
T Consensus 159 l~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~v~Dt~~~l~~al~~gk~vLfEGAQG~lLDid~GtYP~VT 238 (424)
T PRK13786 159 LEELAPQKEKEIKELGGDPSIVRDEALIDKYLELGRQLAPYITDVSYEINKALDEGKSVLAEGAQGTHLDVIHGTQKFVT 238 (424)
T ss_pred HHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhhccccCHHHHHHHHHHcCCcEEEEecchhhhccccCcCCccc
Confidence
Q ss_pred ------------------------------------------ccchHhHHHhhcCCccccccCCccccccchHHHHHHhh
Q psy3917 202 ------------------------------------------KDSEIGDKLQRIGNEVGVTTKRKRRCGWLDIPLLKYTS 239 (295)
Q Consensus 202 ------------------------------------------l~~e~g~~lr~~G~E~Gt~TgRpRR~GwlD~~~lrya~ 239 (295)
+++|+|++||+.|+||||||||||||||||++++|||+
T Consensus 239 SSntta~ga~~g~Gi~p~~i~~ViGV~KAYtTRVG~GPFPTEl~~e~g~~lr~~G~E~GttTGRpRR~GwlD~v~lrya~ 318 (424)
T PRK13786 239 SSSTIAGSACANLGVGPTRVDNVLGIVKAYITRVGEGPLPTELKDEAGEHLQDVGGEFGTTTGRPRRCGWFDLPLLKKAI 318 (424)
T ss_pred cCCcchhhhhhccCCCccccceEEEEEEeecccccCCCCCcccchHHHHHHhhccCcccCcCCCCcccccchHHHHHHHH
Confidence 56788999999999999999999999999999999999
Q ss_pred HhcCcceEEeecccccCCCCceeEEEEEeeCCEEeecCCCCccccCCcEEEEE
Q psy3917 240 MVNGYTKLCITKLDILDTFEEIKIGVAYKRHGKTLHYFPSNSSELAKVEYYVL 292 (295)
Q Consensus 240 ~ing~~~lalTklDvL~~~~~ikic~~Y~~~G~~~~~~P~~~~~l~~~epvy~ 292 (295)
++||+|+|||||||+|++|++||||++|+++|+.+++||++++.|++|+|+|.
T Consensus 319 ~ing~t~lalTkLDvL~~~~~ikvc~~Y~~~g~~~~~~p~~~~~l~~~~PvYe 371 (424)
T PRK13786 319 YLNGYTEIALTKLDVLTGLDPIKICVGYELDGEILDYPPELTSDLARCVPVYE 371 (424)
T ss_pred HHcCCCeEEeeCccccCCCCceeEEEEEeeCCEEcccCCcChhhhcccEEEEE
Confidence 99999999999999999999999999999999999999999999999999996
No 4
>PRK13787 adenylosuccinate synthetase; Provisional
Probab=100.00 E-value=4.2e-100 Score=743.80 Aligned_cols=247 Identities=46% Similarity=0.805 Sum_probs=235.0
Q ss_pred ceEEEEEcCCcccCCchhhHHhhccCCcEEEecCCCCCCccEEEECCEEEEEeeccceeecCCceeEEcCCeEechHHHH
Q psy3917 41 HKVTVVLGAQWGDEGKGKVVDMLAVDADLVCRCQGGNNAGHTVVVDSTEYDFHLVPSGIINPKAKSIIGNGVVIHLPGLF 120 (295)
Q Consensus 41 m~~~vVvG~QwGDEGKGKivD~La~~~dvVvRfnGG~NAGHTVv~~g~k~~l~llPSGil~~~~~~~IG~GvVvdp~~l~ 120 (295)
|++++|||+|||||||||||||||+++|+|||||||+||||||+++|+||+|||||||+|+|++.|+||||||+||++|+
T Consensus 1 m~~~vVvG~QwGDEGKGKivD~La~~~d~VvR~~GG~NAGHTVv~~g~k~~lhliPSGil~~~~~~vIG~GvVi~p~~L~ 80 (423)
T PRK13787 1 MPASLVVGTQWGDEGKAKVIDFLSKDTDIIVRYQGGANAGHTVVVHGKKYVFHLVPSGVIYDQTICVIGNGVVLDPLFFI 80 (423)
T ss_pred CCcEEEEeCCcCCCCCchhhhhhcccCCEEEECCCcCCCCcEEEECCEEEEEEecCccccCCCccEEecCcEEECHHHHH
Confidence 66789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCCEEEeCCceecchhhhhhhchhhhhh-CCCCcCCCCCCccccccccccccCceeeeccCChhhh
Q psy3917 121 DELQKNENKGLTGWKDRLLISDRAHLVFDFHQQVDGLQEAEK-GKKSLGTTKKGIGPAYSSKATRNGIRIADLLGDFNVF 199 (295)
Q Consensus 121 ~Ei~~L~~~G~~~~~~rL~Is~rAhli~p~H~~lD~~~E~~~-g~~~IGTTg~GIGpay~dK~~R~giRv~DL~~~~~~~ 199 (295)
+||++|+++|++ ..+||+||+|||||+|||+++|+++|..+ +.++||||||||||||+||++|+|||++||++ + .|
T Consensus 81 ~Ei~~L~~~Gv~-~~~rl~Is~rahli~P~H~~lD~~~E~~~~g~~~IGTT~rGIGPaY~dK~~R~giR~~Dl~~-~-~~ 157 (423)
T PRK13787 81 EECDRLQKEGFP-VKDKLLLSDACHLLFPYHSQIDSARETTSSQEHKIGTTKKGIGICYADKMMRTGLRVGDLLD-K-SY 157 (423)
T ss_pred HHHHHHHHcCCC-CcCCEEEeCCccCcCchHHHHhhhhHHhhcCCCccCCCCCCchHhhhhhhhcccccHHHhcC-H-HH
Confidence 999999999995 35799999999999999999999999988 78899999999999999999999999999984 2 21
Q ss_pred hc------------------------------------------------------------------------------
Q psy3917 200 TE------------------------------------------------------------------------------ 201 (295)
Q Consensus 200 ~~------------------------------------------------------------------------------ 201 (295)
++
T Consensus 158 ~~kl~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~D~~~~l~~a~~~gk~vLfEGAQG~lLDid~GtYPy 237 (423)
T PRK13787 158 KRRLKHLVDEKNRELDKLYGMPPVSYNDINDGLKFFLSKVGKNIINTAYYLDTELKKGKRVLLEGAQGTGLDVDFGTYPY 237 (423)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHhcccccHHHHHHHHHHCCCeEEEEechhhhhhcccCcCCC
Confidence 11
Q ss_pred --------------------------------------------ccchHhHHHhhcCCccccccCCccccccchHHHHHH
Q psy3917 202 --------------------------------------------KDSEIGDKLQRIGNEVGVTTKRKRRCGWLDIPLLKY 237 (295)
Q Consensus 202 --------------------------------------------l~~e~g~~lr~~G~E~Gt~TgRpRR~GwlD~~~lry 237 (295)
+++|+++.||+.|+|||+||||||||||||++++||
T Consensus 238 VTSSnt~agga~~g~Gi~p~~i~~ViGV~KAYtTRVG~GPFPTEl~~e~g~~lr~~G~E~G~tTGRpRR~GWlD~v~lry 317 (423)
T PRK13787 238 VTSSNPTTGGALIGTGISFQHLKHVIGITKAYTTRVGEGPFPTELLGEAGEVLRQKGGEFGATTGRPRRCGWFDVEMLKH 317 (423)
T ss_pred cCCCCchhhhhhhccCCCccccceEEEEEEeccccccCCCCCccccchHHHHHHhhcCccCCccCCCceeecchHHHHHH
Confidence 567889999999999999999999999999999999
Q ss_pred hhHhcCcceEEeecccccCCCCceeEEEEEeeCCEEeecCCCCccccCCcEEEEE
Q psy3917 238 TSMVNGYTKLCITKLDILDTFEEIKIGVAYKRHGKTLHYFPSNSSELAKVEYYVL 292 (295)
Q Consensus 238 a~~ing~~~lalTklDvL~~~~~ikic~~Y~~~G~~~~~~P~~~~~l~~~epvy~ 292 (295)
|+++||+|+|||||||||++|++||||++|+++|+.+++||++ +|++|||+|.
T Consensus 318 a~~ing~t~lalTkLDvL~~~~~ikvc~~Y~~~G~~~~~~P~~--~l~~~~PvYe 370 (423)
T PRK13787 318 SVRINGITSIALTKIDILSDYDTIPVAVGYKLNGKTLDCFPSQ--GLEKVEPLYE 370 (423)
T ss_pred HHHhcCCceEEEecccccCCCCceeEEEEEeeCCeEeccCChh--hhcCceEEEE
Confidence 9999999999999999999999999999999999999999997 8999999996
No 5
>PLN02513 adenylosuccinate synthase
Probab=100.00 E-value=8.7e-100 Score=742.66 Aligned_cols=249 Identities=57% Similarity=0.984 Sum_probs=237.4
Q ss_pred eEEEEEcCCcccCCchhhHHhhccCCcEEEecCCCCCCccEEEE-CCEEEEEeeccceeecCCceeEEcCCeEechHHHH
Q psy3917 42 KVTVVLGAQWGDEGKGKVVDMLAVDADLVCRCQGGNNAGHTVVV-DSTEYDFHLVPSGIINPKAKSIIGNGVVIHLPGLF 120 (295)
Q Consensus 42 ~~~vVvG~QwGDEGKGKivD~La~~~dvVvRfnGG~NAGHTVv~-~g~k~~l~llPSGil~~~~~~~IG~GvVvdp~~l~ 120 (295)
++++|||+|||||||||||||||+++|+|||||||+||||||++ +|+||+|||||||+|+|++.|+||||||+||+.|+
T Consensus 3 ~~~vVvG~QwGDEGKGKivD~La~~~d~VvR~qGG~NAGHTvv~~~g~k~~lhliPSGil~~~~~~vIG~GvVvdp~~L~ 82 (427)
T PLN02513 3 QVSAVLGTQWGDEGKGKLVDILAQHFDIVARCQGGANAGHTIYNDEGKKFALHLVPSGILNEKTTCVIGNGVVVHLPGLF 82 (427)
T ss_pred ceEEEEecCccCCCCceeehhhccCCCEEEEcCCcCCCCceEEecCCeEEEEEecCccccCCCcceEECCcEEEcHHHHH
Confidence 57899999999999999999999999999999999999999997 99999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCCEEEeCCceecchhhhhhhchhhhhhCCCCcCCCCCCccccccccccccCceeeeccCChhhhh
Q psy3917 121 DELQKNENKGLTGWKDRLLISDRAHLVFDFHQQVDGLQEAEKGKKSLGTTKKGIGPAYSSKATRNGIRIADLLGDFNVFT 200 (295)
Q Consensus 121 ~Ei~~L~~~G~~~~~~rL~Is~rAhli~p~H~~lD~~~E~~~g~~~IGTTg~GIGpay~dK~~R~giRv~DL~~~~~~~~ 200 (295)
+||++|+++|++. .+||+||+|||||+|||+++|+++|..++..+||||||||||||+||++|+|||++||++ ++.|+
T Consensus 83 ~Ei~~L~~~Gv~~-~~rl~Is~rahli~P~H~~~D~~~E~~~g~~~IGTT~rGIGPaY~dK~~R~giR~~Dl~~-~~~~~ 160 (427)
T PLN02513 83 EEIDGLESNGVSC-EGRLLVSDRAHLLFDFHQEVDGLREAELAGSKIGTTKRGIGPAYSSKATRNGLRVGDLRH-MDTFA 160 (427)
T ss_pred HHHHHHHHcCCCC-CCCEEEcCCCCcCChHHHHHHHhhHHhcCCCCcCCCCCCchHhhhhhhhccccchhhhcC-HHHHH
Confidence 9999999999963 479999999999999999999999999999999999999999999999999999999994 33221
Q ss_pred c-------------------------------------------------------------------------------
Q psy3917 201 E------------------------------------------------------------------------------- 201 (295)
Q Consensus 201 ~------------------------------------------------------------------------------- 201 (295)
+
T Consensus 161 ~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~v~D~~~~l~~al~~gk~iLfEGAQG~lLDid~GtYP~VT 240 (427)
T PLN02513 161 EKLRELLADAAARFEGFEYDASMVEEEVEAYKKFAERLEPFITDTVHYLNEAIQAGKKILVEGAQATMLDIDFGTYPFVT 240 (427)
T ss_pred HHHHHHHHHHHHHHhhccCCCccHHHHHHHHHHHHHHhccccccHHHHHHHHHHcCCcEEEEccchhhcccccCcCCccC
Confidence 1
Q ss_pred ------------------------------------------ccchHhHHHhhcCCccccccCCccccccchHHHHHHhh
Q psy3917 202 ------------------------------------------KDSEIGDKLQRIGNEVGVTTKRKRRCGWLDIPLLKYTS 239 (295)
Q Consensus 202 ------------------------------------------l~~e~g~~lr~~G~E~Gt~TgRpRR~GwlD~~~lrya~ 239 (295)
+++|.++.||+.|+||||||||||||||||++++|||+
T Consensus 241 SS~t~a~g~~~g~Gi~p~~i~~ViGV~KAY~TRVG~GPFPTEl~~~~g~~lr~~G~E~GttTGRpRR~GwfD~v~lrya~ 320 (427)
T PLN02513 241 SSNPSAGGICTGLGIAPRKLGDIIGVVKAYTTRVGSGPFPTELFGELGDLLREAGQEFGTTTGRPRRCGWLDIVALKYSC 320 (427)
T ss_pred CCCchHHHHhhccCCCccccceEEEEEEeccccccCCCCCccccchHHHHHhhccCcccCcCCCCceeccchHHHHHHHH
Confidence 56788999999999999999999999999999999999
Q ss_pred HhcCcceEEeecccccCCCCceeEEEEEee-CCEEeecCCCCccccCCcEEEEE
Q psy3917 240 MVNGYTKLCITKLDILDTFEEIKIGVAYKR-HGKTLHYFPSNSSELAKVEYYVL 292 (295)
Q Consensus 240 ~ing~~~lalTklDvL~~~~~ikic~~Y~~-~G~~~~~~P~~~~~l~~~epvy~ 292 (295)
++||+|+|||||||+|++|++||||++|++ +|+.+++||++++.|++|||+|.
T Consensus 321 ~ing~t~lalTkLDvL~~~~~ikvc~~Y~~~~g~~~~~~P~~~~~l~~~~Pvye 374 (427)
T PLN02513 321 QINGFTSLNLTKLDVLSGLPEIKIGVAYKTPDGKVVKSFPADLDTLEQVEVVYE 374 (427)
T ss_pred HhcCCCeEEEecceecCCCCeeEEEEEEEcCCCcEeccCCcchhhhccceEEEE
Confidence 999999999999999999999999999999 99999999999999999999994
No 6
>PRK13784 adenylosuccinate synthetase; Provisional
Probab=100.00 E-value=9.6e-100 Score=742.12 Aligned_cols=248 Identities=41% Similarity=0.769 Sum_probs=234.1
Q ss_pred ceEEEEEcCCcccCCchhhHHhhccCCcEEEecCCCCCCccEEEECCEEEEEeeccceeecCCceeEEcCCeEechHHHH
Q psy3917 41 HKVTVVLGAQWGDEGKGKVVDMLAVDADLVCRCQGGNNAGHTVVVDSTEYDFHLVPSGIINPKAKSIIGNGVVIHLPGLF 120 (295)
Q Consensus 41 m~~~vVvG~QwGDEGKGKivD~La~~~dvVvRfnGG~NAGHTVv~~g~k~~l~llPSGil~~~~~~~IG~GvVvdp~~l~ 120 (295)
|+.++|||+|||||||||||||||+++|+|||||||+||||||+++|+||+|||||||+|+|++.|+||||||+||+.|+
T Consensus 1 m~~~vVvG~QwGDEGKGKivD~La~~~d~VvR~qGG~NAGHTvv~~g~k~~lhliPSGil~~~~~~vIG~GvVi~p~~L~ 80 (428)
T PRK13784 1 MSNIVIVGAQWGDEGKGKIADTLAEKADLVVRYQGGNNAGHTLVVNGKKTFLHLIPSGVLHQHTKCVIGHGVVLDPVALD 80 (428)
T ss_pred CCcEEEEeCCcCCCCcchhhhhhcccCCEEEEeCCcCCcCcEEEECCEEEEEeecCceecCCCceEEECCcEEEcHHHHH
Confidence 66789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCCEEEeCCceecchhhhhhhchhhhhhCCCCcCCCCCCccccccccccccCceeeeccCChhhhh
Q psy3917 121 DELQKNENKGLTGWKDRLLISDRAHLVFDFHQQVDGLQEAEKGKKSLGTTKKGIGPAYSSKATRNGIRIADLLGDFNVFT 200 (295)
Q Consensus 121 ~Ei~~L~~~G~~~~~~rL~Is~rAhli~p~H~~lD~~~E~~~g~~~IGTTg~GIGpay~dK~~R~giRv~DL~~~~~~~~ 200 (295)
+||+.|+++|++...+||+||+|||||+|||+++|+++|..++ .+||||||||||||+||++|+|||++||++ ++.|+
T Consensus 81 ~Ei~~L~~~Gv~~~~~rL~Is~rahli~p~H~~lD~~~E~~~~-~~IGTT~rGIGPaY~dK~~R~giR~~Dl~~-~~~~~ 158 (428)
T PRK13784 81 EEITRLQAKGIAISAENLFVSESCTIITSYHKLLDAVRESNTS-EKIGTTGKGIGPAYEDKVSRKGIKFKHLFD-KDLLR 158 (428)
T ss_pred HHHHHHHhcCCCCCCCCEEEcCCCCcCChHHHHHhhhhHHhcC-CCCCCCCCcchHhHHHHHhcccchhhhhcC-HHHHH
Confidence 9999999999963247999999999999999999999999887 899999999999999999999999999984 33332
Q ss_pred c-------------------------------------------------------------------------------
Q psy3917 201 E------------------------------------------------------------------------------- 201 (295)
Q Consensus 201 ~------------------------------------------------------------------------------- 201 (295)
+
T Consensus 159 ~kl~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~v~Dt~~~l~~a~~~gk~vLfEGAQG~lLDid~GTYPyV 238 (428)
T PRK13784 159 SRLAISLAEKETLFRDLYKVEYPTLEQEFDKLFALGQKLKQYAADTFSIIDQAIAAGKNVVYEGAQGVLLDVDYGTYPFV 238 (428)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHhhhhcccHHHHHHHHHHcCCcEEEEeccceeeccccCcCCcc
Confidence 1
Q ss_pred -------------------------------------------ccchHhHHHhhcCCccccccCCccccccchHHHHHHh
Q psy3917 202 -------------------------------------------KDSEIGDKLQRIGNEVGVTTKRKRRCGWLDIPLLKYT 238 (295)
Q Consensus 202 -------------------------------------------l~~e~g~~lr~~G~E~Gt~TgRpRR~GwlD~~~lrya 238 (295)
+++|+|+.||+.|+||||||||||||||||++++|||
T Consensus 239 TSSntta~ga~~g~Gi~p~~i~~ViGV~KAYtTRVG~GPFpTEl~~e~g~~lr~~G~E~GttTGRpRR~GWlD~v~lrya 318 (428)
T PRK13784 239 TSSNTSVAGVYSGATTAGHGLDHVIGITKAYTTRVGEGPFPTELFDDVGKFIQHKGGEIGVTTGRIRRCGWLDLPLLKYS 318 (428)
T ss_pred cCCCcchhhhhhccCCCCcccceEEEEEEeccccccCCCCCcccchHHHHHHHHcCceecccCCCCcccccchHHHHHHH
Confidence 6678899999999999999999999999999999999
Q ss_pred hHhcCcceEEeecccccCCCCceeEEEEEeeCCEEeec-CCCCccccCCcEEEEE
Q psy3917 239 SMVNGYTKLCITKLDILDTFEEIKIGVAYKRHGKTLHY-FPSNSSELAKVEYYVL 292 (295)
Q Consensus 239 ~~ing~~~lalTklDvL~~~~~ikic~~Y~~~G~~~~~-~P~~~~~l~~~epvy~ 292 (295)
+++||+|+|||||||||++|++||||++|+++|+.+++ || +. .|++|||+|.
T Consensus 319 ~~ing~t~lalTkLDvL~~~~~ikic~~Y~~~g~~~~~~~P-~~-~~~~~~pvYe 371 (428)
T PRK13784 319 AKCSNLTSIALTKVDVLSDMDTLKVCIGYKYEGKEIYCAYP-GI-DLYKVEPILV 371 (428)
T ss_pred HHhcCCCeEEEecccccCCCCcceEEEEEEeCCEEecccCC-hh-hhccceEEEE
Confidence 99999999999999999999999999999999999988 99 55 8999999996
No 7
>PTZ00350 adenylosuccinate synthetase; Provisional
Probab=100.00 E-value=1.5e-99 Score=742.61 Aligned_cols=257 Identities=53% Similarity=0.925 Sum_probs=242.2
Q ss_pred CCCCCCCceEEEEEcCCcccCCchhhHHhhccCCcEEEecCCCCCCccEEEECCEEEEEeeccceeecCCceeEEcCCeE
Q psy3917 34 TGENPKLHKVTVVLGAQWGDEGKGKVVDMLAVDADLVCRCQGGNNAGHTVVVDSTEYDFHLVPSGIINPKAKSIIGNGVV 113 (295)
Q Consensus 34 ~~~~~~~m~~~vVvG~QwGDEGKGKivD~La~~~dvVvRfnGG~NAGHTVv~~g~k~~l~llPSGil~~~~~~~IG~GvV 113 (295)
+|......++++|||+|||||||||||||||+++|+|||||||+||||||+++|+||+|||||||+|+|++.|+||||||
T Consensus 5 ~~~~~~~~~~~vVvG~qwGDEGKGKivD~La~~~d~VvR~qGG~NAGHTVv~~g~k~~lhliPSGil~~~~~~vIG~GvV 84 (436)
T PTZ00350 5 DSLNGLKSKVVVILGAQWGDEGKGKLVDILSEKADIVARFNGGANAGHTIVVDGKKYALHLLPCGILYPNCINVLGNGVV 84 (436)
T ss_pred eeccCCCCceEEEEecCcCCCCCchhhhhhccCCCEEEEeCCcCCCCcEEEECCEEEEEEeCCccccCCCcceEECCcEE
Confidence 44555666789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred echHHHHHHHHHHHhCCCCCCCCCEEEeCCceecchhhhhhhchhhhhh--CCCCcCCCCCCccccccccccccCceeee
Q psy3917 114 IHLPGLFDELQKNENKGLTGWKDRLLISDRAHLVFDFHQQVDGLQEAEK--GKKSLGTTKKGIGPAYSSKATRNGIRIAD 191 (295)
Q Consensus 114 vdp~~l~~Ei~~L~~~G~~~~~~rL~Is~rAhli~p~H~~lD~~~E~~~--g~~~IGTTg~GIGpay~dK~~R~giRv~D 191 (295)
+||++|++||++|+++|++ +.+||+||+|||||+|||+++|+++|..+ |..+||||||||||||+||++|+|||++|
T Consensus 85 idp~~L~~Ei~~L~~~Gv~-~~~rL~Is~rahli~P~H~~lD~~~E~~~~~g~~~iGTT~rGIGPaY~dk~~R~giR~~D 163 (436)
T PTZ00350 85 IHLPSLLEEIEQLTKKGIN-LLGRLYISDRAHLVFDLHQAIDGIQESEKGKGGTQIGTTKRGIGPCYSTKASRTGLRVGD 163 (436)
T ss_pred EcHHHHHHHHHHHHHcCCC-CCCCEEEcCCCCcCChHHHHHHhhhhhhhhcCCCCcCCCCCCchHhhhhhhhccccchhh
Confidence 9999999999999999995 45799999999999999999999999974 88899999999999999999999999999
Q ss_pred ccCChhhhhc----------------------------------------------------------------------
Q psy3917 192 LLGDFNVFTE---------------------------------------------------------------------- 201 (295)
Q Consensus 192 L~~~~~~~~~---------------------------------------------------------------------- 201 (295)
|+ +++.|++
T Consensus 164 l~-~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~v~D~~~~l~~al~~gk~vLfEGAQG~lLDid~G 242 (436)
T PTZ00350 164 LL-NFETFEKKYRKLVEKLQEQYNIEEYDAEEELERYKGYAEKLKDMIVDTVYFMNKAIKEGKRVLVEGANATMLDIDFG 242 (436)
T ss_pred hc-CHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHHHHHHHhcccccHHHHHHHHHHCCCcEEEEechhhhhhcccC
Confidence 99 4443321
Q ss_pred ------------------------------------------------ccchHhHHHhhcCCccccccCCccccccchHH
Q psy3917 202 ------------------------------------------------KDSEIGDKLQRIGNEVGVTTKRKRRCGWLDIP 233 (295)
Q Consensus 202 ------------------------------------------------l~~e~g~~lr~~G~E~Gt~TgRpRR~GwlD~~ 233 (295)
+++|+|+.||+.|+|||+||||||||||||++
T Consensus 243 tYPfVTSSnt~a~ga~~g~Gi~p~~i~~ViGV~KAYtTRVG~GPFPTEl~~e~g~~lr~~g~E~GttTGRpRR~Gw~D~v 322 (436)
T PTZ00350 243 TYPYVTSSNTTVGGVCTGLGIPPNAIILVIGVVKAYTTRVGEGPFPTELFDENGDYLRKKGHEYGTTTGRPRRCGWLDIP 322 (436)
T ss_pred cCCCcCCCCchhhhhhhccCCCccccceEEEEEEeccccccCCCCCCcCchHHHHHHHhccCcccCcCCCCceeccchHH
Confidence 56788999999999999999999999999999
Q ss_pred HHHHhhHhcCcceEEeecccccCCCCceeEEEEEeeCCEE--eecCCCCccccCCcEEEEE
Q psy3917 234 LLKYTSMVNGYTKLCITKLDILDTFEEIKIGVAYKRHGKT--LHYFPSNSSELAKVEYYVL 292 (295)
Q Consensus 234 ~lrya~~ing~~~lalTklDvL~~~~~ikic~~Y~~~G~~--~~~~P~~~~~l~~~epvy~ 292 (295)
++|||+++||+|+|||||||+|++|++||||++|+++|+. +++||++++.|++|+|+|.
T Consensus 323 ~lrya~~ing~t~lalTkLDvL~~~~~ikvc~~Y~~~g~~~~~~~~p~~~~~l~~~~Pvye 383 (436)
T PTZ00350 323 ALRYVQMINGFDSINLTKLDVLSGLKEIKICVNYKNKGTGLEIGRYPSSIEELEEYEPVYE 383 (436)
T ss_pred HHHHHHHhcCCCeEEEecccccCCCCceEEEEEEEeCCEEeccccCCCChhHHhccEEEEE
Confidence 9999999999999999999999999999999999999999 9999999999999999995
No 8
>PRK01117 adenylosuccinate synthetase; Provisional
Probab=100.00 E-value=8.2e-100 Score=744.08 Aligned_cols=250 Identities=50% Similarity=0.880 Sum_probs=238.9
Q ss_pred ceEEEEEcCCcccCCchhhHHhhccCCcEEEecCCCCCCccEEEECCEEEEEeeccceeecCCceeEEcCCeEechHHHH
Q psy3917 41 HKVTVVLGAQWGDEGKGKVVDMLAVDADLVCRCQGGNNAGHTVVVDSTEYDFHLVPSGIINPKAKSIIGNGVVIHLPGLF 120 (295)
Q Consensus 41 m~~~vVvG~QwGDEGKGKivD~La~~~dvVvRfnGG~NAGHTVv~~g~k~~l~llPSGil~~~~~~~IG~GvVvdp~~l~ 120 (295)
|++++|||+|||||||||||||||+++|+|||||||+||||||+++|+||+|||||||+|+|++.++||||||+||++|+
T Consensus 1 m~~~vVvG~qwGDEGKGKivD~La~~~d~VvR~~GG~NAGHTVv~~g~k~~lhllPSGil~~~~~~viG~GvVv~p~~L~ 80 (430)
T PRK01117 1 MKNVVVVGTQWGDEGKGKIVDLLSERADVVVRFQGGHNAGHTLVIDGKKYKLHLIPSGILRPGKTCVIGNGVVLDPEALL 80 (430)
T ss_pred CCcEEEEecccCCCCCceeeeeecccCCEEEEcCCcCCCCcEEEECCEEEEEEecCccccCCCccEEECCeEEECHHHHH
Confidence 66789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCCEEEeCCceecchhhhhhhchhhhhhCCCCcCCCCCCccccccccccccCceeeeccCChhhhh
Q psy3917 121 DELQKNENKGLTGWKDRLLISDRAHLVFDFHQQVDGLQEAEKGKKSLGTTKKGIGPAYSSKATRNGIRIADLLGDFNVFT 200 (295)
Q Consensus 121 ~Ei~~L~~~G~~~~~~rL~Is~rAhli~p~H~~lD~~~E~~~g~~~IGTTg~GIGpay~dK~~R~giRv~DL~~~~~~~~ 200 (295)
+||++|+++|++. .+||+||+|||||+|||+++|+++|..+|..+||||+|||||||+||++|.|||++||++ ++.|.
T Consensus 81 ~Ei~~l~~~g~~~-~~rL~Is~ra~li~p~H~~lD~~~E~~rg~~~iGTT~rGIGpay~dk~~R~gir~~Dl~~-~~~l~ 158 (430)
T PRK01117 81 KEIDELEARGVDV-RERLRISERAHLILPYHRALDKAREKARGKKKIGTTGRGIGPAYEDKVARRGIRVGDLLD-PETFA 158 (430)
T ss_pred HHHHHHHHcCCCC-CCCEEEeCCCCCCCchHHHHhhhhHHhcCCCCCCCCCCCchHHHHHhhhcccccHHHhcC-HHHHH
Confidence 9999999999964 579999999999999999999999999998999999999999999999999999999984 33221
Q ss_pred c-------------------------------------------------------------------------------
Q psy3917 201 E------------------------------------------------------------------------------- 201 (295)
Q Consensus 201 ~------------------------------------------------------------------------------- 201 (295)
+
T Consensus 159 ~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~D~~~~l~~al~~gk~vLfEGAQG~lLDid~GtYP~V 238 (430)
T PRK01117 159 EKLEENLEYKNFLLTKYYGAEAVDFEEILDEYLEYAERLKPYVTDTSLLLNDALKAGKRVLFEGAQGTLLDIDHGTYPFV 238 (430)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHCCCeEEEEechhhhhccccCcCCCc
Confidence 1
Q ss_pred -------------------------------------------ccchHhHHHhhcCCccccccCCccccccchHHHHHHh
Q psy3917 202 -------------------------------------------KDSEIGDKLQRIGNEVGVTTKRKRRCGWLDIPLLKYT 238 (295)
Q Consensus 202 -------------------------------------------l~~e~g~~lr~~G~E~Gt~TgRpRR~GwlD~~~lrya 238 (295)
+++|++++||+.|+||||||||||||||||++++|||
T Consensus 239 TSS~tt~~g~~~g~Gi~p~~i~~viGV~KAY~TRVG~GPFpTEl~~e~g~~lr~~g~E~GttTGRpRR~GwlD~v~lrya 318 (430)
T PRK01117 239 TSSNTTAGGAATGSGVGPTKIDYVLGIAKAYTTRVGSGPFPTELFDEVGEHLRERGHEFGTTTGRPRRCGWFDAVALRYA 318 (430)
T ss_pred CCcCchhhhhhhccCCCCcccceEEEEEEcCCCcccCCCCCCcCChHHHHHHhhccCeecccCCCcceeecchHHHHHHH
Confidence 5677899999999999999999999999999999999
Q ss_pred hHhcCcceEEeecccccCCCCceeEEEEEeeCCEEeecCCCCccccCCcEEEEE
Q psy3917 239 SMVNGYTKLCITKLDILDTFEEIKIGVAYKRHGKTLHYFPSNSSELAKVEYYVL 292 (295)
Q Consensus 239 ~~ing~~~lalTklDvL~~~~~ikic~~Y~~~G~~~~~~P~~~~~l~~~epvy~ 292 (295)
+++||+|+|||||||+|++|++||||++|+++|+++++||++++.|++|||+|.
T Consensus 319 ~~ing~~~lalTkLDvL~~~~~ikic~~Y~~~g~~~~~~P~~~~~l~~~~Pvye 372 (430)
T PRK01117 319 VRVNGLTGLALTKLDVLDGLEEIKICVAYELDGKRIDYFPASLEDLARCEPIYE 372 (430)
T ss_pred HHhcCCCeEEEeCceecCCCCceeEEEEEeeCCEEeeeCCCChhhhcccEEEEE
Confidence 999999999999999999999999999999999999999999999999999996
No 9
>cd03108 AdSS Adenylosuccinate synthetase (AdSS) catalyzes the first step in the de novo biosynthesis of AMP. IMP and L-aspartate are conjugated in a two-step reaction accompanied by the hydrolysis of GTP to GDP in the presence of Mg2+. In the first step, the r-phosphate group of GTP is transferred to the 6-oxygen atom of IMP. An aspartate then displaces this 6-phosphate group to form the product adenylosuccinate. Because of its critical role in purine biosynthesis, AdSS is a target of antibiotics, herbicides and antitumor drugs.
Probab=100.00 E-value=4e-99 Score=725.02 Aligned_cols=247 Identities=57% Similarity=0.949 Sum_probs=234.9
Q ss_pred EEEEcCCcccCCchhhHHhhccCCcEEEecCCCCCCccEEEECCEEEEEeeccceeecCCceeEEcCCeEechHHHHHHH
Q psy3917 44 TVVLGAQWGDEGKGKVVDMLAVDADLVCRCQGGNNAGHTVVVDSTEYDFHLVPSGIINPKAKSIIGNGVVIHLPGLFDEL 123 (295)
Q Consensus 44 ~vVvG~QwGDEGKGKivD~La~~~dvVvRfnGG~NAGHTVv~~g~k~~l~llPSGil~~~~~~~IG~GvVvdp~~l~~Ei 123 (295)
++|||+|||||||||||||||+++|+|||||||+||||||+++|+||+|||||||+++|+++|+||||||+||++|++||
T Consensus 2 ~vVvG~qwGDEGKGKivD~La~~~d~VvR~~GG~NAGHTvv~~g~k~~lhliPSGil~~~~~~viG~GvVidp~~l~~Ei 81 (363)
T cd03108 2 TVVVGAQWGDEGKGKIVDLLAERADIVVRFQGGNNAGHTVVVNGKKFKLHLLPSGILNPGVTCVIGNGVVIDPPALFEEI 81 (363)
T ss_pred EEEEecccCCCCCceeeeeccccCCEEEEcCCcCCCCcEEEECCEEEEEEecCccccCCCceEEECCeEEEcHHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCCCCCCCCEEEeCCceecchhhhhhhchhhhhhCCCCcCCCCCCccccccccccccCceeeeccCChhhhhc--
Q psy3917 124 QKNENKGLTGWKDRLLISDRAHLVFDFHQQVDGLQEAEKGKKSLGTTKKGIGPAYSSKATRNGIRIADLLGDFNVFTE-- 201 (295)
Q Consensus 124 ~~L~~~G~~~~~~rL~Is~rAhli~p~H~~lD~~~E~~~g~~~IGTTg~GIGpay~dK~~R~giRv~DL~~~~~~~~~-- 201 (295)
++|+++|++ +.+||+||+|||||+|||+++|+++|..+|..+||||||||||||+||++|+|||++|| +....+.+
T Consensus 82 ~~L~~~g~~-~~~rL~Is~ra~li~P~H~~lD~~~E~~rg~~~iGTT~rGIGpay~dk~~R~gir~~Dl-d~~~~l~~a~ 159 (363)
T cd03108 82 DELEKKGGD-VTGRLFISDRAHLVFPYHILLDGLREEARGKKKIGTTKRGIGPAYEDKAARRGIRVGDL-DTSYLINEAI 159 (363)
T ss_pred HHHHHcCCC-CCCCEEEcCCCCCCChHHHHHhhhhHhhcCCCCcCCCCCcchHHHHHhhhccCCeEEeC-cHHHHHHHHH
Confidence 999999885 36799999999999999999999999999999999999999999999999999999997 22222211
Q ss_pred ---------------------------------------------------------------------ccchHhHHHhh
Q psy3917 202 ---------------------------------------------------------------------KDSEIGDKLQR 212 (295)
Q Consensus 202 ---------------------------------------------------------------------l~~e~g~~lr~ 212 (295)
+++|.++.||+
T Consensus 160 ~~gk~vLfEGAQG~lLDid~GtYPyVTSSnt~a~g~~~g~Gi~p~~i~~viGV~KAY~TRVG~GPFpTEl~~e~g~~lr~ 239 (363)
T cd03108 160 QAGKKVLFEGAQGTLLDIDFGTYPFVTSSNTTAGGACTGLGIPPRKIGRVIGVVKAYTTRVGSGPFPTELFDETGDKLRE 239 (363)
T ss_pred HcCCcEEEEccchhhhccccCcCCCcCCCCchhhhhhhccCCCccccceEEEEEeeccccccCCCCCccCchHHHHHHhh
Confidence 56788999999
Q ss_pred cCCccccccCCccccccchHHHHHHhhHhcCcceEEeecccccCCCCceeEEEEEeeCCEEeecCCCCccccCCcEEEEE
Q psy3917 213 IGNEVGVTTKRKRRCGWLDIPLLKYTSMVNGYTKLCITKLDILDTFEEIKIGVAYKRHGKTLHYFPSNSSELAKVEYYVL 292 (295)
Q Consensus 213 ~G~E~Gt~TgRpRR~GwlD~~~lrya~~ing~~~lalTklDvL~~~~~ikic~~Y~~~G~~~~~~P~~~~~l~~~epvy~ 292 (295)
.|+||||||||||||||||++++|||+++||+|+|||||||+|++|++||||++|+++|+.+++||++++.|++|||+|.
T Consensus 240 ~G~E~GttTGRpRR~Gw~D~v~lrya~~ing~t~lalTkLDvL~~~~~ikvc~~Y~~~g~~~~~~p~~~~~l~~~~Pvye 319 (363)
T cd03108 240 AGHEFGTTTGRPRRCGWLDLVALKYAVRINGVTELALTKLDVLDGLDEIKVCVAYELDGKEIDYFPADLEDLEKVEPVYE 319 (363)
T ss_pred cCCcccccCCCCcccccchHHHHHHHHHhcCCCeEEEeceeecCCCCeEEEEEeEEeCCEEEeeCCCChhHHhccEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999996
No 10
>smart00788 Adenylsucc_synt Adenylosuccinate synthetase. Adenylosuccinate synthetase plays an important role in purine biosynthesis, by catalyzing the GTP-dependent conversion of IMP and aspartic acid to AMP. Adenylosuccinate synthetase has been characterized from various sources ranging from Escherichia coli (gene purA) to vertebrate tissues. In vertebrates, two isozymes are present - one involved in purine biosynthesis and the other in the purine nucleotide cycle. The crystal structure of adenylosuccinate synthetase from E. coli reveals that the dominant structural element of each monomer of the homodimer is a central beta-sheet of 10 strands. The first nine strands of the sheet are mutually parallel with right-handed crossover connections between the strands. The 10th strand is antiparallel with respect to the first nine strands. In addition, the enzyme has two antiparallel beta-sheets, comprised of two strands and three strands each, 11 alpha-helices and two short 3/10-helices. Furt
Probab=100.00 E-value=1.3e-98 Score=734.45 Aligned_cols=248 Identities=55% Similarity=0.938 Sum_probs=236.9
Q ss_pred EEEEEcCCcccCCchhhHHhhccCCcEEEecCCCCCCccEEEECCEEEEEeeccceeecCCceeEEcCCeEechHHHHHH
Q psy3917 43 VTVVLGAQWGDEGKGKVVDMLAVDADLVCRCQGGNNAGHTVVVDSTEYDFHLVPSGIINPKAKSIIGNGVVIHLPGLFDE 122 (295)
Q Consensus 43 ~~vVvG~QwGDEGKGKivD~La~~~dvVvRfnGG~NAGHTVv~~g~k~~l~llPSGil~~~~~~~IG~GvVvdp~~l~~E 122 (295)
+++|||+|||||||||||||||+++|+|||||||+||||||+++|+||+|||||||+|+|+++|+||||||+||+.|++|
T Consensus 1 ~~vVvG~qwGDEGKGKivD~La~~~d~VvR~~GG~NAGHTvv~~g~k~~lhllPSGil~~~~~~vig~GvVv~p~~L~~E 80 (421)
T smart00788 1 VVVVVGAQWGDEGKGKIVDYLAEKADVVVRFQGGNNAGHTVVVGGKKYKLHLLPSGILNPNKKCVIGNGVVIDPEALFKE 80 (421)
T ss_pred CEEEEecccCCCCCceeeeeccccCCEEEEccccCCCCcEEEECCEEEEEEecCccccCCCceEEECCcEEEcHHHHHHH
Confidence 36899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCCCCCCCEEEeCCceecchhhhhhhchhhhhhCCCCcCCCCCCccccccccccccCceeeeccCChhhhhc-
Q psy3917 123 LQKNENKGLTGWKDRLLISDRAHLVFDFHQQVDGLQEAEKGKKSLGTTKKGIGPAYSSKATRNGIRIADLLGDFNVFTE- 201 (295)
Q Consensus 123 i~~L~~~G~~~~~~rL~Is~rAhli~p~H~~lD~~~E~~~g~~~IGTTg~GIGpay~dK~~R~giRv~DL~~~~~~~~~- 201 (295)
|++|+++|++ +.+||+||+|||||+|||+++|+++|..+|..+||||||||||||+||++|+|||++||+ +++.|++
T Consensus 81 i~~L~~~Gi~-~~~rL~Is~ra~li~p~H~~lD~~~E~~~g~~~iGTT~rGIGpay~dk~~R~gir~~Dl~-~~~~~~~k 158 (421)
T smart00788 81 IDQLEAKGVD-VRDRLFISDRAHLILPYHIALDKLREKARGKKKIGTTGRGIGPAYEDKVARRGIRVGDLF-DEDVFREK 158 (421)
T ss_pred HHHHHHcCCC-CCCCEEEcCCCCCCChHHHHHhhhhHHhcCCCCCCCCCCCcHHHHHHHhhccCcchhhhc-CHHHHHHH
Confidence 9999999995 468999999999999999999999999999899999999999999999999999999998 4443221
Q ss_pred --------------------------------------------------------------------------------
Q psy3917 202 -------------------------------------------------------------------------------- 201 (295)
Q Consensus 202 -------------------------------------------------------------------------------- 201 (295)
T Consensus 159 l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~D~~~~l~~al~~gk~vLfEGAQG~lLDid~GtYP~VTS 238 (421)
T smart00788 159 LEELLDYKNFLLKKLYGAEPVDVEEILEELLEYAERLKPYVVDVSELLNDALKAGKKVLFEGAQGTLLDIDHGTYPYVTS 238 (421)
T ss_pred HHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHhccceecHHHHHHHHHHCCCeEEEEeCcHhhhccccCcCCCccC
Confidence
Q ss_pred -----------------------------------------ccchHhHHHhhcCCccccccCCccccccchHHHHHHhhH
Q psy3917 202 -----------------------------------------KDSEIGDKLQRIGNEVGVTTKRKRRCGWLDIPLLKYTSM 240 (295)
Q Consensus 202 -----------------------------------------l~~e~g~~lr~~G~E~Gt~TgRpRR~GwlD~~~lrya~~ 240 (295)
+++|.+++||+.|+||||||||||||||||++++|||++
T Consensus 239 Snt~~~g~~~g~Gi~p~~i~~viGV~KAY~TRVG~GPFpTEl~~e~g~~lr~~g~E~GttTGRpRR~GwlD~v~lrya~~ 318 (421)
T smart00788 239 SNTTAGGAATGAGIGPTRIDYVIGVVKAYTTRVGEGPFPTELFDETGEKLRERGHEFGTTTGRPRRCGWFDAVLLRYAVR 318 (421)
T ss_pred ccchhhhhhhccCCCccccceEEEEEEeccccccCCCCCcccChHHHHHHhhcCCeeccCCCCCcccccchHHHHHHHHH
Confidence 557789999999999999999999999999999999999
Q ss_pred hcCcceEEeecccccCCCCceeEEEEEeeCCEEeecCCCCccccCCcEEEEE
Q psy3917 241 VNGYTKLCITKLDILDTFEEIKIGVAYKRHGKTLHYFPSNSSELAKVEYYVL 292 (295)
Q Consensus 241 ing~~~lalTklDvL~~~~~ikic~~Y~~~G~~~~~~P~~~~~l~~~epvy~ 292 (295)
+||+|+|||||||+|++|++||||++|+++|+++++||++.+.|++|+|+|.
T Consensus 319 ing~~~lalTkLDvL~~~~~ikvc~~Y~~~g~~~~~~P~~~~~l~~~~PvY~ 370 (421)
T smart00788 319 INGITGLALTKLDVLDGLDEIKVCVAYKLDGKEIDYFPADLEDLERCEPIYE 370 (421)
T ss_pred hcCCCeEEEECceecCCCCceeEEEEEecCCEEEeeCCCChhhhcccEEEEE
Confidence 9999999999999999999999999999999999999999999999999996
No 11
>PRK13783 adenylosuccinate synthetase; Provisional
Probab=100.00 E-value=2.2e-98 Score=728.26 Aligned_cols=246 Identities=44% Similarity=0.709 Sum_probs=233.5
Q ss_pred EEEEEcCCcccCCchhhHHhhccCCcEEEecCCCCCCccEEEECCEEEEEeeccceeecCCceeEEcCCeEechHHHHHH
Q psy3917 43 VTVVLGAQWGDEGKGKVVDMLAVDADLVCRCQGGNNAGHTVVVDSTEYDFHLVPSGIINPKAKSIIGNGVVIHLPGLFDE 122 (295)
Q Consensus 43 ~~vVvG~QwGDEGKGKivD~La~~~dvVvRfnGG~NAGHTVv~~g~k~~l~llPSGil~~~~~~~IG~GvVvdp~~l~~E 122 (295)
+++|||+|||||||||||||||+++|+|||||||+||||||+++++||+||+||||+|+|++.|+||||||+||++|++|
T Consensus 2 ~~vVvG~qwGDEGKGKivD~La~~~d~VvR~qGG~NAGHTVv~~~~k~~lhliPSGil~~~~~~viG~GvVv~p~~L~~E 81 (404)
T PRK13783 2 KRVIVGLQWGDEGKGKVVTYLSRYYDIVVRYSGGANAGHTVNYGDFKVVHHLLPSADFKKNVGAAIGNGVVLDLEVLVEE 81 (404)
T ss_pred cEEEEcCCcCCCCCchhhhhhccCCCEEEECCCcCCCCcEEEECCEEEEEeecCceecCCCccEEECCcEEECHHHHHHH
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCCCCCCCEEEeCCceecchhhhhhhchhhhhhCCCCcCCCCCCccccccccccccCceeeeccCChhhhhc-
Q psy3917 123 LQKNENKGLTGWKDRLLISDRAHLVFDFHQQVDGLQEAEKGKKSLGTTKKGIGPAYSSKATRNGIRIADLLGDFNVFTE- 201 (295)
Q Consensus 123 i~~L~~~G~~~~~~rL~Is~rAhli~p~H~~lD~~~E~~~g~~~IGTTg~GIGpay~dK~~R~giRv~DL~~~~~~~~~- 201 (295)
|++|+++|++ +.+||+||+|||||+|||+.+|+++|..++ .+||||||||||||+||++|+|||++||++ ++.|++
T Consensus 82 i~~L~~~g~~-~~~rL~Is~rA~li~p~H~~~D~~~E~~rg-~~iGTT~rGIGPaY~dk~~R~giR~~Dl~~-~~~l~~k 158 (404)
T PRK13783 82 LEELKEKFPD-YSGRIFISELAHVVLPVHKELDEIIESVRK-NAIGTTKRGIGPAYADKVMRVGVRLADLFD-EEKLREF 158 (404)
T ss_pred HHHHHHcCCC-CCCCEEEcCCCCCCCcHHHHHhhhcHHhcC-CCCCCCCCCcHHHHhhhhcccCcEEehhCC-HHHHHHH
Confidence 9999999985 357999999999999999999999999998 599999999999999999999999999984 332110
Q ss_pred --------------------------------------------------------------------------------
Q psy3917 202 -------------------------------------------------------------------------------- 201 (295)
Q Consensus 202 -------------------------------------------------------------------------------- 201 (295)
T Consensus 159 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~d~~~l~~~~~gk~vLfEGAQG~lLDid~GtYP~VTSSntta~g 238 (404)
T PRK13783 159 LEKILSLYKKLYGIEFDVEKMMEDLLTFYEKIKDLVVSPVEIKRILEEKSVLFEGTQGVLLDLDVGTYPYVTSSNCSTTG 238 (404)
T ss_pred HHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhcCCHHHHHHHhcCCcEEEEecchhhcccccCcCCCcCCCCchHhh
Confidence
Q ss_pred ---------------------------------ccchHhHHHhhcCCccccccCCccccccchHHHHHHhhHhcCcceEE
Q psy3917 202 ---------------------------------KDSEIGDKLQRIGNEVGVTTKRKRRCGWLDIPLLKYTSMVNGYTKLC 248 (295)
Q Consensus 202 ---------------------------------l~~e~g~~lr~~G~E~Gt~TgRpRR~GwlD~~~lrya~~ing~~~la 248 (295)
+++|.+++||+.|+||||||||||||||||++++|||+++||+|+||
T Consensus 239 ~~~g~Gip~~i~~ViGV~KAY~TRVG~GPFPTEl~~e~g~~Lr~~G~E~GttTGRpRR~GwlD~v~lrya~~ing~~~la 318 (404)
T PRK13783 239 VSAGMGFPVKVDEVIGVFKAYTTRVGEGPFPTELFGEEGEKLRKAGHEYGATTGRPRRCGWLDLPLLRYAIEVSGVDSLV 318 (404)
T ss_pred hhhccCCccccceEEEEEEeecccccCCCCCccccchHHHHHhhccCcccccCCCCcccccchHHHHHHHHHhcCCCeEE
Confidence 55678999999999999999999999999999999999999999999
Q ss_pred eecccccCCCCceeEEEEEeeCCEEeecCCCCccccCCcEEEEE
Q psy3917 249 ITKLDILDTFEEIKIGVAYKRHGKTLHYFPSNSSELAKVEYYVL 292 (295)
Q Consensus 249 lTklDvL~~~~~ikic~~Y~~~G~~~~~~P~~~~~l~~~epvy~ 292 (295)
||||||||+|++||||++|+++|+.+ .||+++++|++|+|+|.
T Consensus 319 lTkLDvL~~~~~ikic~~Y~~~g~~~-~~P~~~~~l~~~~Pvye 361 (404)
T PRK13783 319 MTKADVLNGFEKIKVCVRYEIGGKEV-RDPSSLRDLEKAEPVYE 361 (404)
T ss_pred EechhhhCCCCcccEEEEEeeCCEEE-eCCCChhhhhcceEEEE
Confidence 99999999999999999999999999 69999999999999996
No 12
>PRK13785 adenylosuccinate synthetase; Provisional
Probab=100.00 E-value=2e-97 Score=729.54 Aligned_cols=245 Identities=39% Similarity=0.737 Sum_probs=231.5
Q ss_pred EEEEEcCCcccCCchhhHHhhccCCcEEEecCCCCCCccEEEECCEEEEEeeccceeecCCceeEEcCCeEechHHHHHH
Q psy3917 43 VTVVLGAQWGDEGKGKVVDMLAVDADLVCRCQGGNNAGHTVVVDSTEYDFHLVPSGIINPKAKSIIGNGVVIHLPGLFDE 122 (295)
Q Consensus 43 ~~vVvG~QwGDEGKGKivD~La~~~dvVvRfnGG~NAGHTVv~~g~k~~l~llPSGil~~~~~~~IG~GvVvdp~~l~~E 122 (295)
+++|||+|||||||||||||||+++|+|||||||+||||||+++|+||+|||||||+|++ +.|+||||||+||++|++|
T Consensus 2 ~~vVvG~QwGDEGKGKivD~La~~~dvVvR~~GG~NAGHTVv~~g~k~~lhliPSGil~~-~~~vIG~GvVvdp~~L~~E 80 (454)
T PRK13785 2 TVTIVGSQLGDEGKGGVVDLYGDAADVVVRYQGGDNAGHTVVHGGEEYKLSLVPSGAVRG-KIGVLGNGCVVNPETLFDE 80 (454)
T ss_pred cEEEEccCcCCCCCceeeeecccCCCEEEEcCCcCCcCcEEEECCEEEEEeecCCCccCC-CceEECCcEEEcHHHHHHH
Confidence 378999999999999999999999999999999999999999999999999999999996 8899999999999999999
Q ss_pred HHHHHhCCCCCCCCCEEEeCCceecchhhhhhhchhhhhh--CCCCcCCCCCCccccccccccccCceeeeccCChhhhh
Q psy3917 123 LQKNENKGLTGWKDRLLISDRAHLVFDFHQQVDGLQEAEK--GKKSLGTTKKGIGPAYSSKATRNGIRIADLLGDFNVFT 200 (295)
Q Consensus 123 i~~L~~~G~~~~~~rL~Is~rAhli~p~H~~lD~~~E~~~--g~~~IGTTg~GIGpay~dK~~R~giRv~DL~~~~~~~~ 200 (295)
|++|+++|++. ||+||+|||||+|||+.+|+++|..+ +..+||||||||||||+||++|+|||++||++ ++.|.
T Consensus 81 i~~L~~~Gv~~---~l~Is~rahli~P~H~~lD~~~E~~r~~g~~~IGTT~rGIGPaY~DK~~R~giR~~Dl~~-~~~~~ 156 (454)
T PRK13785 81 IDALRERGLDP---DVRVAERAHVILPYHRVLDGIEEEAKSDSDLEVGTTGRGIGPTYEDKAGRRGVRVGDLLD-PDVLR 156 (454)
T ss_pred HHHHHhcCCCc---cEEEeCCCcccCHhHHhhhHHhHHhhccCCCccCCCCCCchhhhhhhhhccccchhhhcC-HHHHH
Confidence 99999999952 99999999999999999999999988 56899999999999999999999999999884 21100
Q ss_pred c-------------------------------------------------------------------------------
Q psy3917 201 E------------------------------------------------------------------------------- 201 (295)
Q Consensus 201 ~------------------------------------------------------------------------------- 201 (295)
+
T Consensus 157 ~kl~~~~~~~n~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~d~~~~l~~a~~~gk~vLfEGAQG~lLDi 236 (454)
T PRK13785 157 DRLEYVVPQKRALAEDVYGLDASETPEAFDVDALFEEYREYGERLAEEDMTVNAGDFLAERIDDGDNVMLEGAQGTSIDI 236 (454)
T ss_pred HHHHHHHHHHHHHHHHHhCccccccccCCCHHHHHHHHHHHHHHhCccceeccHHHHHHHHHHcCCeEEEEecchhhhcc
Confidence 0
Q ss_pred -----------------------------------------------------ccc---------------hHhHHHhhc
Q psy3917 202 -----------------------------------------------------KDS---------------EIGDKLQRI 213 (295)
Q Consensus 202 -----------------------------------------------------l~~---------------e~g~~lr~~ 213 (295)
+++ |+++.||+.
T Consensus 237 d~GtYPyVTSSnt~a~ga~~g~Gi~p~~i~~~~ViGV~KAY~TRVG~GPFPTEl~~~~~~~~~~~~~~~~~e~g~~lr~~ 316 (454)
T PRK13785 237 DHGNYPYVTSSNPTAGGAATGTGLGPTVVGQGEVVGIVKAYLSRVGSGPLPTELGGVEGDTPDEGGRPDEEELATYIREE 316 (454)
T ss_pred ccCcCCccCCCCchhhhhhhccCCCcccccCceEEEEEEeecccccCCCCCcccccccccccccccccchHHHHHHHhhc
Confidence 556 889999999
Q ss_pred CCccccccCCccccccchHHHHHHhhHhcCcceEEeecccccCCCCceeEEEEEeeCCEEeecCCCCccccCCcEEEEE
Q psy3917 214 GNEVGVTTKRKRRCGWLDIPLLKYTSMVNGYTKLCITKLDILDTFEEIKIGVAYKRHGKTLHYFPSNSSELAKVEYYVL 292 (295)
Q Consensus 214 G~E~Gt~TgRpRR~GwlD~~~lrya~~ing~~~lalTklDvL~~~~~ikic~~Y~~~G~~~~~~P~~~~~l~~~epvy~ 292 (295)
|+||||||||||||||||++++|||+++||+|+|||||||+|++|++||||++|+++|+.+++||++++.|++|+|+|.
T Consensus 317 G~E~GttTGRpRR~GWlD~v~lryA~~inG~t~lalTkLDvL~~~~~ikvc~~Y~~~g~~~~~~P~~~~~l~~~~PvYe 395 (454)
T PRK13785 317 GGEYGTVTGRPRRVGWLDMPMLRHAARASGFTGLAINHIDVLAGLDEVKVGHSYELDGEELLTMPATTERWARCEPNFR 395 (454)
T ss_pred CCcccccCCCCcccccchHHHHHHHHHhcCCCeEEEecccccCCCCceeEEEEEeeCCEEcccCCCChhhhcccEEEEE
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999996
No 13
>PF00709 Adenylsucc_synt: Adenylosuccinate synthetase; InterPro: IPR001114 Adenylosuccinate synthetase (6.3.4.4 from EC) plays an important role in purine biosynthesis, by catalysing the GTP-dependent conversion of IMP and aspartic acid to AMP. Adenylosuccinate synthetase has been characterised from various sources ranging from Escherichia coli (gene purA) to vertebrate tissues. In vertebrates, two isozymes are present: one involved in purine biosynthesis and the other in the purine nucleotide cycle. The crystal structure of adenylosuccinate synthetase from E. coli reveals that the dominant structural element of each monomer of the homodimer is a central beta-sheet of 10 strands. The first nine strands of the sheet are mutually parallel with right-handed crossover connections between the strands. The 10th strand is antiparallel with respect to the first nine strands. In addition, the enzyme has two antiparallel beta-sheets, comprised of two strands and three strands each, 11 alpha-helices and two short 3/10-helices. Further, it has been suggested that the similarities in the GTP-binding domains of the synthetase and the p21ras protein are an example of convergent evolution of two distinct families of GTP-binding proteins []. Structures of adenylosuccinate synthetase from Triticum aestivum and Arabidopsis thaliana when compared with the known structures from E. coli reveals that the overall fold is very similar to that of the E. coli protein [].; GO: 0000287 magnesium ion binding, 0004019 adenylosuccinate synthase activity, 0005525 GTP binding, 0006164 purine nucleotide biosynthetic process, 0005737 cytoplasm; PDB: 3HID_A 1DJ3_B 2D7U_A 1DJ2_A 1P9B_A 1LON_A 1MF0_A 1LOO_A 1LNY_B 2DGN_A ....
Probab=100.00 E-value=3.2e-97 Score=725.18 Aligned_cols=248 Identities=54% Similarity=0.920 Sum_probs=227.8
Q ss_pred EEEEEcCCcccCCchhhHHhhccCCcEEEecCCCCCCccEEEECCEEEEEeeccceeecCCceeEEcCCeEechHHHHHH
Q psy3917 43 VTVVLGAQWGDEGKGKVVDMLAVDADLVCRCQGGNNAGHTVVVDSTEYDFHLVPSGIINPKAKSIIGNGVVIHLPGLFDE 122 (295)
Q Consensus 43 ~~vVvG~QwGDEGKGKivD~La~~~dvVvRfnGG~NAGHTVv~~g~k~~l~llPSGil~~~~~~~IG~GvVvdp~~l~~E 122 (295)
+++|||+|||||||||||||||+++|+|||||||+||||||+++|+||+|||||||+|+|++.|+||||||+||++|++|
T Consensus 1 ~~vVvG~qwGDEGKGkivD~La~~~d~VvR~~GG~NAGHTVv~~g~~~~~hliPSGi~~~~~~~~ig~GvVidp~~l~~E 80 (421)
T PF00709_consen 1 VIVVVGLQWGDEGKGKIVDYLAEDADVVVRFNGGANAGHTVVVDGKKFVFHLIPSGILHPGVKTVIGNGVVIDPEALLEE 80 (421)
T ss_dssp EEEEEESSSS-SSHHHHHHHHHTT-SEEEESSBSTTSSEEEEETTEEEEESSS-GGGGSTTSEEEE-TTBEEEHHHHHHH
T ss_pred CEEEEcCCcccCCCceeehhhcCccCEEEEecCCCCCCCEEEECCEEEEEeecceeeecCCceEeecCCEEECHHHHHHH
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCCCCCCCEEEeCCceecchhhhhhhchhhhhhCCCCcCCCCCCccccccccccccCceeeeccCChhhhhc-
Q psy3917 123 LQKNENKGLTGWKDRLLISDRAHLVFDFHQQVDGLQEAEKGKKSLGTTKKGIGPAYSSKATRNGIRIADLLGDFNVFTE- 201 (295)
Q Consensus 123 i~~L~~~G~~~~~~rL~Is~rAhli~p~H~~lD~~~E~~~g~~~IGTTg~GIGpay~dK~~R~giRv~DL~~~~~~~~~- 201 (295)
|++|+++|++. .+||+||+||||++|||+++|++.|..++.++|||||+||||||+||++|.|||++||+ +++.|++
T Consensus 81 i~~L~~~g~~~-~~rl~Is~rahiv~p~H~~lD~~~E~~~g~~~iGTTgrGIGp~y~dk~~R~gir~~DL~-~~~~l~~k 158 (421)
T PF00709_consen 81 IEELESKGVDV-RSRLFISDRAHIVTPYHKALDRLREEARGKGKIGTTGRGIGPAYADKVARRGIRVGDLL-DPEVLREK 158 (421)
T ss_dssp HHHHHCTTGTH-GGTEEEETTSEEE-HHHHHHHHHHHHHCHHTSSSTSSTTHHHHHHHHHTT-S-BGGGGG-SHHHHHHH
T ss_pred HHHHHhcCCCc-ccceEeeCceEEecHHHHHhhHHHHHHhccccccCcCCChHHHhhhhccCCCcEeeecC-CHHHHHHH
Confidence 99999999965 38999999999999999999999999999899999999999999999999999999999 6666543
Q ss_pred --------------------------------------------------------------------------------
Q psy3917 202 -------------------------------------------------------------------------------- 201 (295)
Q Consensus 202 -------------------------------------------------------------------------------- 201 (295)
T Consensus 159 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~d~~~~l~~al~~gk~iLfEGAQG~lLDid~GtyP~VTs 238 (421)
T PF00709_consen 159 LKQILDEKNRLLEKLYGEEPLDVEEILEEYLEYAERLKPYVCDTVEFLNEALKEGKKILFEGAQGTLLDIDHGTYPYVTS 238 (421)
T ss_dssp HHHHHHHHHHHHHHCSTT-HHHHHHHHHHHHHHHHHHGGCEE-HHHHHHHHHHTT--EEEEEESEGGG-TTTSSTTSS-S
T ss_pred HHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHhhCceecHHHHHHHHHHcCCcEEEecCcccccccccCcCCCccc
Confidence
Q ss_pred -----------------------------------------ccchHhHHHhhcCCccccccCCccccccchHHHHHHhhH
Q psy3917 202 -----------------------------------------KDSEIGDKLQRIGNEVGVTTKRKRRCGWLDIPLLKYTSM 240 (295)
Q Consensus 202 -----------------------------------------l~~e~g~~lr~~G~E~Gt~TgRpRR~GwlD~~~lrya~~ 240 (295)
+.++.++.||+.|+|||+||||||||||||++++|||++
T Consensus 239 S~t~~~~a~~g~g~~~~~i~~vigV~KAY~TRvG~GpfpTE~~~~~~~~lr~~g~E~G~~tGr~RR~GwlDlv~lrya~~ 318 (421)
T PF00709_consen 239 SNTTAGGACTGLGIPPRRIDRVIGVTKAYTTRVGEGPFPTELFDEVGEKLRERGNEYGTTTGRPRRCGWLDLVALRYAIR 318 (421)
T ss_dssp S--STHHHHHHHT--GGGEEEEEEEEESSEEESSSS--TTBEESHHHHHHHHHTT-BSTTTTSBEEEEEEEHHHHHHHHH
T ss_pred CcchHHHHhhhcCCCCcceeeEEEEEeeccccccCCCCCCcccchHHHHHHhcCcccCCccCCCccccccHHHHHHHHHH
Confidence 566788999999999999999999999999999999999
Q ss_pred hcCcceEEeecccccCCCCceeEEEEEeeCCEEeecCCCCccccCCcEEEEE
Q psy3917 241 VNGYTKLCITKLDILDTFEEIKIGVAYKRHGKTLHYFPSNSSELAKVEYYVL 292 (295)
Q Consensus 241 ing~~~lalTklDvL~~~~~ikic~~Y~~~G~~~~~~P~~~~~l~~~epvy~ 292 (295)
+||+|+|||||||+||+|++||||++|+++|+++++||++..+|++|||+|.
T Consensus 319 ing~~~lalTkLDvL~~~~~ikic~~Y~~~G~~~~~~p~~~~~l~~~~pvy~ 370 (421)
T PF00709_consen 319 INGITELALTKLDVLDGLDEIKICVAYEYDGKRIDYFPASIEDLEKCEPVYE 370 (421)
T ss_dssp HHTESEEEEE-GGGGTTESEEEEEEEEEETTEEESS--SSHHHHTTEEEEEE
T ss_pred hcCCCeEEEecccccCCCCceEEEEEEEeCCcEeecCCcchhhcccceEEEE
Confidence 9999999999999999999999999999999999999999999999999996
No 14
>PRK13788 adenylosuccinate synthetase; Provisional
Probab=100.00 E-value=5e-92 Score=683.84 Aligned_cols=230 Identities=48% Similarity=0.802 Sum_probs=214.4
Q ss_pred ceEEEEEcCCcccCCchhhHHhhccCCcEEEecCCCCCCccEEEECCEEEEEeeccceeecCCceeEEcCCeEechHHHH
Q psy3917 41 HKVTVVLGAQWGDEGKGKVVDMLAVDADLVCRCQGGNNAGHTVVVDSTEYDFHLVPSGIINPKAKSIIGNGVVIHLPGLF 120 (295)
Q Consensus 41 m~~~vVvG~QwGDEGKGKivD~La~~~dvVvRfnGG~NAGHTVv~~g~k~~l~llPSGil~~~~~~~IG~GvVvdp~~l~ 120 (295)
|++++|||+|||||||||||||||+++|+|||||||+||||||+++|++|+|||||||+|+|++.|+||||||+||+.|+
T Consensus 1 m~~~vVvG~QwGDEGKGKivD~La~~~d~VvR~~GG~NAGHTVv~~g~k~~lhliPSGil~~~~~~viG~GvVidp~~L~ 80 (404)
T PRK13788 1 MPGIAIIGAQWGDEGKGKVVDALAPEADFVVRYQGGANAGHTVVAKGKTFKLNLLPSGVLHPHATSVLGDGMVIDPFRFA 80 (404)
T ss_pred CCcEEEEeCCcCCCCCchhhhhhcccCCEEEEeCCcCCcCcEEEECCEEEEEeccCceecCCCceEEECCcEEEcHHHHH
Confidence 56789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCCEEEeCCceecchhhhhhhchhhhhhCCCCcCCCCCCccccccccccccCceeeeccCChhhhh
Q psy3917 121 DELQKNENKGLTGWKDRLLISDRAHLVFDFHQQVDGLQEAEKGKKSLGTTKKGIGPAYSSKATRNGIRIADLLGDFNVFT 200 (295)
Q Consensus 121 ~Ei~~L~~~G~~~~~~rL~Is~rAhli~p~H~~lD~~~E~~~g~~~IGTTg~GIGpay~dK~~R~giRv~DL~~~~~~~~ 200 (295)
+||++|+++|++ +||+||+|||||+|||+++|+. ..+||||||||||||+||++|+|||++||++ ++.|.
T Consensus 81 ~Ei~~L~~~Gv~---~rl~Is~rahli~p~H~~~D~~------~~~IGTT~rGIGpay~dk~~R~gir~~Dl~~-~~~l~ 150 (404)
T PRK13788 81 EERENLRAGGLN---PKLLISERAHLVLPHHKYVDGR------KNFVGTTGRGIGPAYSDRARRVGIRFGDLLD-EAVLR 150 (404)
T ss_pred HHHHHHHhCCCC---CCEEEeCCcCcCChHHHHHhCc------ccCCCCCCCcchHhhhhhcccccceeehhcC-HHHHH
Confidence 999999999985 5999999999999999999973 3589999999999999999999999999994 33221
Q ss_pred c-------------------------------------------------------------------------------
Q psy3917 201 E------------------------------------------------------------------------------- 201 (295)
Q Consensus 201 ~------------------------------------------------------------------------------- 201 (295)
+
T Consensus 151 ~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~D~~~~l~~al~~gk~iLfEGAQG~lLDid~GtYP~VTSS 230 (404)
T PRK13788 151 ERVERLLEAKPNSTREAGWDTVEKALADLAPMREILLPFIADTGSLLREAIREGKRVLFEGAQATLLDLNYGTYPYVTSS 230 (404)
T ss_pred HHHHHHHHHHHHHHhhccCCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHCCCeEEEEccchhhhccccCcCCCcCCC
Confidence 1
Q ss_pred ----------------------------------------ccchHhHHHhhcCC----ccccccCCccccccchHHHHHH
Q psy3917 202 ----------------------------------------KDSEIGDKLQRIGN----EVGVTTKRKRRCGWLDIPLLKY 237 (295)
Q Consensus 202 ----------------------------------------l~~e~g~~lr~~G~----E~Gt~TgRpRR~GwlD~~~lry 237 (295)
+++|++++||+.|+ ||||||||||||||||++++||
T Consensus 231 nt~~~g~~~g~Gi~p~~i~~ViGV~KAY~TRVG~GPFPTEl~~e~g~~lr~~G~~~~~E~GttTGRpRR~GwlD~v~lry 310 (404)
T PRK13788 231 HPTVGGILVGAGVNHKAINKVYGVAKAFTTRVGHGPFPTEVFGEMAIRLRGKGGNPWDEFGTTTGRARRVGWLDLVLLKY 310 (404)
T ss_pred CchHHHHHhccCCCccccceEEEEEEeccccccCCCCCCcCccHHHHHHHhcCCCCceeecccCCCCceeecchHHHHHH
Confidence 56678999999999 9999999999999999999999
Q ss_pred hhHhcCcceEEeecccccCCCCceeEEEEEeeCCEEe-ecCCCC
Q psy3917 238 TSMVNGYTKLCITKLDILDTFEEIKIGVAYKRHGKTL-HYFPSN 280 (295)
Q Consensus 238 a~~ing~~~lalTklDvL~~~~~ikic~~Y~~~G~~~-~~~P~~ 280 (295)
|+++||+|+|||||||+|++|++||||++|+++|+++ ..+|-.
T Consensus 311 a~~ing~~~lalTkLDvL~~~~~ikic~~Y~~~g~pvye~~~GW 354 (404)
T PRK13788 311 ACEVNGFDGLVLTKLDVLSGLEKVKVCVEYDDDGQPVYKELPGW 354 (404)
T ss_pred HHHhcCCCeEEEecchhcCCCCceeEEEEEecCCeEEEEeCCCc
Confidence 9999999999999999999999999999999999854 556665
No 15
>KOG1355|consensus
Probab=100.00 E-value=2e-91 Score=664.66 Aligned_cols=257 Identities=68% Similarity=1.112 Sum_probs=246.8
Q ss_pred CCCCCceEEEEEcCCcccCCchhhHHhhcc--CCcEEEecCCCCCCccEEEECCEEEEEeeccceeecCCceeEEcCCeE
Q psy3917 36 ENPKLHKVTVVLGAQWGDEGKGKVVDMLAV--DADLVCRCQGGNNAGHTVVVDSTEYDFHLVPSGIINPKAKSIIGNGVV 113 (295)
Q Consensus 36 ~~~~~m~~~vVvG~QwGDEGKGKivD~La~--~~dvVvRfnGG~NAGHTVv~~g~k~~l~llPSGil~~~~~~~IG~GvV 113 (295)
.++...++.+|+|+|||||||||++|+|++ ++|+++|+|||+||||||+++|++|.||++|||+++|++.++||||||
T Consensus 24 ~~~~~~~v~vvLG~QWgDeGKGk~vdll~~~~~~di~arcqGGnNAGHTvv~~g~~ydfHllPSGiinp~~~~~iGNGVV 103 (455)
T KOG1355|consen 24 ARPSGNQVTVVLGAQWGDEGKGKVVDLLAQDAKVDIVARCQGGNNAGHTVVVDGVEYDFHLLPSGIINPNCTNFIGNGVV 103 (455)
T ss_pred cccCCCceEEEEeeeeccCCCceeEEeecccCCCceeeeccCCCCCCcEEEEcceEEeeeeccccccCCCceEEecceeE
Confidence 456677899999999999999999999999 789999999999999999999999999999999999999999999999
Q ss_pred echHHHHHHHHHHHhCCCCCCCCCEEEeCCceecchhhhhhhchhhhhhCCCC---cCCCCCCccccccccccccCceee
Q psy3917 114 IHLPGLFDELQKNENKGLTGWKDRLLISDRAHLVFDFHQQVDGLQEAEKGKKS---LGTTKKGIGPAYSSKATRNGIRIA 190 (295)
Q Consensus 114 vdp~~l~~Ei~~L~~~G~~~~~~rL~Is~rAhli~p~H~~lD~~~E~~~g~~~---IGTTg~GIGpay~dK~~R~giRv~ 190 (295)
|+++.||+|++.|+++|+. ..+||+|||||||+++||+..|.++|.+++.++ ||||++||||+|+.|++|.|||++
T Consensus 104 ihlp~lF~E~e~le~kGl~-~~~Rl~iSdrAHLvFdfHq~vDglqE~el~~~~gkniGTTkkGIGP~YSsKa~RsGiRv~ 182 (455)
T KOG1355|consen 104 IHLPGLFEELEKLEAKGLK-WEKRLIISDRAHLVFDFHQAVDGLQEQELQEQSGKNIGTTKKGIGPAYSSKAARSGLRVC 182 (455)
T ss_pred EechhHHHHHHhhhhcccc-ccceeEeccchhheeehhhhcchhhHHHHHhhhcccccccCCCcCcccchhhhhcCcchh
Confidence 9999999999999999997 689999999999999999999999999998666 999999999999999999999999
Q ss_pred eccCChhhhhc---------------------------------------------------------------------
Q psy3917 191 DLLGDFNVFTE--------------------------------------------------------------------- 201 (295)
Q Consensus 191 DL~~~~~~~~~--------------------------------------------------------------------- 201 (295)
||+.|+++|.+
T Consensus 183 dL~~D~~~fs~r~k~l~~~~~~~fp~~e~die~el~~~K~~aekl~p~V~D~V~F~~eal~~~KkiLVEGanaamLDiDF 262 (455)
T KOG1355|consen 183 DLVSDFDEFSERFKVLAEQYKSRFPTLEIDIEGELARYKGYAEKLKPMVRDTVYFMYEALHGKKKILVEGANAAMLDIDF 262 (455)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHhcCCeEecHHHHHHHHHHHHHhhcchhhchhhhhhhhhhcCceEEEecccceeeeccc
Confidence 99988888754
Q ss_pred -------------------------------------------------ccchHhHHHhhcCCccccccCCccccccchH
Q psy3917 202 -------------------------------------------------KDSEIGDKLQRIGNEVGVTTKRKRRCGWLDI 232 (295)
Q Consensus 202 -------------------------------------------------l~~e~g~~lr~~G~E~Gt~TgRpRR~GwlD~ 232 (295)
+.+|+|+.||.+|.|||+||||+|||||||+
T Consensus 263 GTYPfVTSSn~tvGGvcTGlGipPq~ig~viGVVKAYtTRVG~GpFPTEqlneiGelLqt~G~E~GvTTgRkRRCGWLDl 342 (455)
T KOG1355|consen 263 GTYPFVTSSNCTVGGVCTGLGIPPQNIGEVIGVVKAYTTRVGIGPFPTEQLNEIGELLQTRGREFGVTTGRKRRCGWLDL 342 (455)
T ss_pred CcccccccCCCcccceeccCCCCcccccceeeeEeeeeeecccCCCchhhccchhHHHHhccceeeeecCCccccchhHH
Confidence 5578999999999999999999999999999
Q ss_pred HHHHHhhHhcCcceEEeecccccCCCCceeEEEEEeeCCEEeecCCCCccccCCcEEEEEe
Q psy3917 233 PLLKYTSMVNGYTKLCITKLDILDTFEEIKIGVAYKRHGKTLHYFPSNSSELAKVEYYVLI 293 (295)
Q Consensus 233 ~~lrya~~ing~~~lalTklDvL~~~~~ikic~~Y~~~G~~~~~~P~~~~~l~~~epvy~~ 293 (295)
++||||+||||+|+|+|||||+||.|+||||+++|+++|+++++||++++.|.++|.+|..
T Consensus 343 v~Lkys~mING~tal~lTKLDiLd~~~eIkvgVaYk~~G~~i~~fPa~~~~l~~~eveY~~ 403 (455)
T KOG1355|consen 343 VLLKYSHMINGFTALALTKLDILDTFPEIKVGVAYKLNGKIIPHFPANQEVLGKVEVEYKT 403 (455)
T ss_pred HHHHHHHhhcchhheeeehhhhhhhccceeEEEEEeeCCcCCCCCcccHHHHhheeEEEEe
Confidence 9999999999999999999999999999999999999999999999999999999999974
No 16
>PTZ00351 adenylosuccinate synthetase; Provisional
Probab=100.00 E-value=4.1e-88 Score=675.05 Aligned_cols=247 Identities=31% Similarity=0.529 Sum_probs=228.7
Q ss_pred CCCceEEEEEcCCcccCCchhhHHhhccC--CcEEEecCCCCCCccEEEE-CCEEEEEeeccceeecCCceeEEcCCeEe
Q psy3917 38 PKLHKVTVVLGAQWGDEGKGKVVDMLAVD--ADLVCRCQGGNNAGHTVVV-DSTEYDFHLVPSGIINPKAKSIIGNGVVI 114 (295)
Q Consensus 38 ~~~m~~~vVvG~QwGDEGKGKivD~La~~--~dvVvRfnGG~NAGHTVv~-~g~k~~l~llPSGil~~~~~~~IG~GvVv 114 (295)
-..+.+++|||+|||||||||||||||++ +|+|||||||+||||||++ +|+||+|||||||+|++++.|+|||||||
T Consensus 166 ~~~~~viVVVGaQWGDEGKGKIVD~LA~~~~aDvVVRfqGG~NAGHTVV~~~Gkky~LHLIPSGIL~p~~~~vIGnGVVI 245 (710)
T PTZ00351 166 VEAHDVIMVAGAFFGDEGKGKTVDAVAHHPLCTCIARVNSGENAGHTVYDKAGRKFVFNLAPSGLLLPGKRNYIGPECVM 245 (710)
T ss_pred HhhcCcEEEEcCCccCCCCchhhhhhccCCCCCEEEEcCCcCCCCceEEecCCeEEEEeccCceecCCCceEEECCCEEE
Confidence 34567899999999999999999999998 8999999999999999999 89999999999999999999999999999
Q ss_pred chHHHH-HHHHHHHhCCCCCCCCCEEEeCCceecchhhhhhhchhhhhhCCCCcCCCCCCccccccccccccCceeeecc
Q psy3917 115 HLPGLF-DELQKNENKGLTGWKDRLLISDRAHLVFDFHQQVDGLQEAEKGKKSLGTTKKGIGPAYSSKATRNGIRIADLL 193 (295)
Q Consensus 115 dp~~l~-~Ei~~L~~~G~~~~~~rL~Is~rAhli~p~H~~lD~~~E~~~g~~~IGTTg~GIGpay~dK~~R~giRv~DL~ 193 (295)
||++|+ +||++|++.|++ +.+||+||+|| ||+|||+++|.+.| .+||||+|||||||+||++|+|||+.||+
T Consensus 246 dP~~L~e~EI~~L~~~Gi~-~~~RL~ISdrA-lI~PyH~~lD~l~E-----~~iGTT~rGIGPaY~DKv~R~GIRl~DL~ 318 (710)
T PTZ00351 246 DPVSFMEKEIIQLIDAGID-YRDRLFIGNVC-IVTPYHKLLDLLGS-----AANSSTLKGMAPVHGSKVMKRGIRLDHIF 318 (710)
T ss_pred cHHHHHHHHHHHHHHcCCC-CCCCEEEcccc-ccChhHHHHHhhhh-----hccCCCCCccChhhhchhhhcccCHHHhc
Confidence 999998 799999999995 45899999999 99999999999988 47999999999999999999999999998
Q ss_pred CChhhhh-------------------------------------------------c-----------------------
Q psy3917 194 GDFNVFT-------------------------------------------------E----------------------- 201 (295)
Q Consensus 194 ~~~~~~~-------------------------------------------------~----------------------- 201 (295)
++++.|+ +
T Consensus 319 ~~~~~lr~rL~~~l~~~n~~l~~~~~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~e~~~e~l~~~y~~rl~~~~~~p~v 398 (710)
T PTZ00351 319 NDDETLRKRLEKDMDTYLGLLKVKNLSDADVVRLCREENSDGVVRVPDYVIAFAQAKDKVEFLVKLYRDRVRHNPDFPAR 398 (710)
T ss_pred CCHHHHHHHHHHHHHHHHHHhhcccccccchhhhccccccccccccccccccchhHHHHHHHHHHHHHHHHhccCCCCeE
Confidence 6522110 0
Q ss_pred --------------------------------------------------------------------------------
Q psy3917 202 -------------------------------------------------------------------------------- 201 (295)
Q Consensus 202 -------------------------------------------------------------------------------- 201 (295)
T Consensus 399 ~Dt~~~L~~A~~~GkkVLfEGAQg~lLDiD~GT~YPfVTSSnttAgGa~~G~Gi~p~~i~~~ViGV~KAY~sTRVG~GPF 478 (710)
T PTZ00351 399 CDVTYELHAAVLRGEKVLLEGPQSYWLSNARTKFWESTTSADTTAAGLLAASQLNFQKFKSVVLNVHKAPGSSRVGIGAC 478 (710)
T ss_pred EeHHHHHHHHHHCCCeEEEEcchhhhhhhhcCCCCCCcCccchHHHHHHhhcCCCcccCCceEEEEEeCCCCCcCcCCCC
Confidence
Q ss_pred ----------------------------------------------------------ccchHhHHH---------hhcC
Q psy3917 202 ----------------------------------------------------------KDSEIGDKL---------QRIG 214 (295)
Q Consensus 202 ----------------------------------------------------------l~~e~g~~l---------r~~G 214 (295)
+++|+|++| |+.|
T Consensus 479 PT~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~El~de~G~~l~~~~~~~~~r~~G 558 (710)
T PTZ00351 479 PSSFVPQDYFSAQNIKTLRDLPSATCANFEAVQRTLFRDGFPHSNDKARHNGIMAPVEYSDETGDYNIGVAMAIASAQHH 558 (710)
T ss_pred CCcccccccccccccccccccccccccccchhcccccccccccccccccccccCCccccccchhhHhhhccccchhhhcC
Confidence 246788999 9999
Q ss_pred CccccccCCccccccchHHHHHHhhHhcCcceEEeecccccCCCCceeEEEEEee---CCEEee----------------
Q psy3917 215 NEVGVTTKRKRRCGWLDIPLLKYTSMVNGYTKLCITKLDILDTFEEIKIGVAYKR---HGKTLH---------------- 275 (295)
Q Consensus 215 ~E~Gt~TgRpRR~GwlD~~~lrya~~ing~~~lalTklDvL~~~~~ikic~~Y~~---~G~~~~---------------- 275 (295)
+|||+||||||||||||+|++||++++||+ .|+|||||+||+||+||||++|++ +|+.++
T Consensus 559 ~E~GatTGRPRRCGWfD~Vllrya~~inG~-~LalTKLDVLd~ldeIkVcvaY~~~~~~gk~~~~~~~~~~~~~~~~~~~ 637 (710)
T PTZ00351 559 GECGAVTKKPRVCGFFDCVLQHEVNSIQGP-YLTISALDRGDEYDKVGVTIAYVYYNPEGKQVDVNGHVYKNGDIIRAGD 637 (710)
T ss_pred ccccCCCCCCccccchHHHHHHHHHhcCCc-eEEEeeeeccCCCCeeeEEEEEEeeCCCCeEeccccccccccccccccC
Confidence 999999999999999999999999999999 999999999999999999999998 899998
Q ss_pred cCCCCccccCCcEEEEEe
Q psy3917 276 YFPSNSSELAKVEYYVLI 293 (295)
Q Consensus 276 ~~P~~~~~l~~~epvy~~ 293 (295)
.|| +...|++|+|+|..
T Consensus 638 ~~P-~~~~L~~~~PIYe~ 654 (710)
T PTZ00351 638 PVP-SEPALYHCHPIVKL 654 (710)
T ss_pred CCC-ChHHhccceEEEEE
Confidence 899 68999999999963
No 17
>PRK04293 adenylosuccinate synthetase; Provisional
Probab=100.00 E-value=2.9e-82 Score=602.19 Aligned_cols=206 Identities=34% Similarity=0.543 Sum_probs=185.9
Q ss_pred ceEEEEEcCCcccCCchhhHHhhcc--CCcEEEecCCCCCCccEEEECCEEEEEeeccceeecCCceeEEcCCeEechHH
Q psy3917 41 HKVTVVLGAQWGDEGKGKVVDMLAV--DADLVCRCQGGNNAGHTVVVDSTEYDFHLVPSGIINPKAKSIIGNGVVIHLPG 118 (295)
Q Consensus 41 m~~~vVvG~QwGDEGKGKivD~La~--~~dvVvRfnGG~NAGHTVv~~g~k~~l~llPSGil~~~~~~~IG~GvVvdp~~ 118 (295)
|++++|||+|||||||||||||||+ ++|+|||||||+||||||+++|+||+||+||||+|+|++.++||||||+||++
T Consensus 1 m~~~vVvG~qwGDEGKGkivD~La~~~~~d~VvR~~GG~NAGHTvv~~g~k~~lhliPSGil~~~~~~~iG~GvVv~p~~ 80 (333)
T PRK04293 1 MTCTIVVGGFFGDEGKGKIIAYLALKDKPSIIARGGVGPNAGHTVEYNGKKYGLRMIPSGFVNKDAKLAIGAGVLVDPEV 80 (333)
T ss_pred CCcEEEEecccCCCCCceeehhhcccCCCCEEEEcCCCCCCCcEEEECCEEEEEEecCccccCCCccEEECCcEEECHHH
Confidence 6778999999999999999999998 99999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCCCCCCCEEEeCCceecchhhhhhhchhhhhhCCCCcCCCCCCccccccccccccCceeee------c
Q psy3917 119 LFDELQKNENKGLTGWKDRLLISDRAHLVFDFHQQVDGLQEAEKGKKSLGTTKKGIGPAYSSKATRNGIRIAD------L 192 (295)
Q Consensus 119 l~~Ei~~L~~~G~~~~~~rL~Is~rAhli~p~H~~lD~~~E~~~g~~~IGTTg~GIGpay~dK~~R~giRv~D------L 192 (295)
|++||++| |+ .+||+||+||||++|||+++|+++|. ++ ++||||||||||||+||++|+|||+.| +
T Consensus 81 L~~Ei~~L---~~---~~rL~Is~ra~li~p~H~~~D~~~E~-~~-~~IGTT~rGIGpaY~dk~~R~gir~~~~~~l~~~ 152 (333)
T PRK04293 81 LLKEVEEL---NV---GGRVFVDYRCGIIEEKHVEEDRSDEH-LS-KKIGSTGTGCGPANADRVLRRLKLAKDVEELEKY 152 (333)
T ss_pred HHHHHHHh---CC---CCCEEEcCCCccCCHHHHHHhHHhHH-hC-CCCCCCCCcccHhhHHHHhhhhhhccchhhhccc
Confidence 99999999 43 37999999999999999999999998 44 899999999999999999999999887 2
Q ss_pred cCChhhh-----hc------------------------------------------------------------------
Q psy3917 193 LGDFNVF-----TE------------------------------------------------------------------ 201 (295)
Q Consensus 193 ~~~~~~~-----~~------------------------------------------------------------------ 201 (295)
..|-..+ .+
T Consensus 153 v~d~~~~l~~al~~gk~vLfEGAQG~lLDid~GtYP~VTSSnt~a~g~~~g~Gi~p~~i~~viGV~KAY~TRVG~GPFpT 232 (333)
T PRK04293 153 LTDVPEEVNEALDRGENVLIEGTQGFGLSLYYGTYPYVTSKDTTASGIASDVGVGPTKVDEVIVVFKSYPTRVGEGPFPT 232 (333)
T ss_pred eecHHHHHHHHHHCCCeEEEEeccceeeccccCcCCCccCCCchhhhhhhccCCCCcccceEEEEEeeecccccCCCCCc
Confidence 2232211 11
Q ss_pred -ccchHhHHHhhcCC-ccccccCCccccccchHHHHHHhhHhcCcceEEeecccccCC
Q psy3917 202 -KDSEIGDKLQRIGN-EVGVTTKRKRRCGWLDIPLLKYTSMVNGYTKLCITKLDILDT 257 (295)
Q Consensus 202 -l~~e~g~~lr~~G~-E~Gt~TgRpRR~GwlD~~~lrya~~ing~~~lalTklDvL~~ 257 (295)
+++|.++ ++|. |||+||||||||||||++++|||+++||+|+|+|||||+|+.
T Consensus 233 El~~e~g~---~~g~~E~GttTGRpRR~GwlD~v~lrya~~ing~~~lalTklDvL~~ 287 (333)
T PRK04293 233 ELSLEEAE---KLGLVEYGTVTGRRRRVGPFDFELARRAARINGATQIAITKLDKLDK 287 (333)
T ss_pred cCCchhhh---hcCCccccccCCCCcccccchHHHHHHHHHhcCCCeEEEEcceecCC
Confidence 3344444 5554 999999999999999999999999999999999999999994
No 18
>PF13316 DUF4087: Protein of unknown function (DUF4087)
Probab=70.32 E-value=1.3 Score=36.88 Aligned_cols=11 Identities=55% Similarity=1.458 Sum_probs=9.1
Q ss_pred ccccccchHHH
Q psy3917 224 KRRCGWLDIPL 234 (295)
Q Consensus 224 pRR~GwlD~~~ 234 (295)
-|||||||-|.
T Consensus 6 E~RCGW~~NPt 16 (101)
T PF13316_consen 6 ETRCGWFDNPT 16 (101)
T ss_pred ccccCcccCCC
Confidence 58999999764
No 19
>KOG1014|consensus
Probab=50.72 E-value=6.5 Score=38.53 Aligned_cols=36 Identities=22% Similarity=0.390 Sum_probs=27.7
Q ss_pred CCccccccccccccCceeeeccCChhhhhcccchHh
Q psy3917 172 KGIGPAYSSKATRNGIRIADLLGDFNVFTEKDSEIG 207 (295)
Q Consensus 172 ~GIGpay~dK~~R~giRv~DL~~~~~~~~~l~~e~g 207 (295)
=|||-+|+.+.+|+|+++.=+-.+.+.|.....||.
T Consensus 59 DGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~ 94 (312)
T KOG1014|consen 59 DGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIE 94 (312)
T ss_pred CcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHH
Confidence 499999999999999998877666666655444544
No 20
>KOG0176|consensus
Probab=36.11 E-value=49 Score=31.07 Aligned_cols=61 Identities=18% Similarity=0.268 Sum_probs=40.2
Q ss_pred EEEEcCCcccCCchhhHHhhccCCcEEEecCCCCCCccEEEECCEEEEEeeccceeecCCceeEEcCCeEe
Q psy3917 44 TVVLGAQWGDEGKGKVVDMLAVDADLVCRCQGGNNAGHTVVVDSTEYDFHLVPSGIINPKAKSIIGNGVVI 114 (295)
Q Consensus 44 ~vVvG~QwGDEGKGKivD~La~~~dvVvRfnGG~NAGHTVv~~g~k~~l~llPSGil~~~~~~~IG~GvVv 114 (295)
+.=+-+|||+++-.+ ..+++.+-+-.=|.|=. +...--+|+=|||.+..-..--||+|.=.
T Consensus 116 v~~LaLrFGe~~~~~--~~msRPFGValliAG~D--------~~gpqL~h~dPSGtf~~~~AKAIGSgsEg 176 (241)
T KOG0176|consen 116 VSDLALRFGEGDDEE--AIMSRPFGVALLIAGHD--------ETGPQLYHLDPSGTFIRYKAKAIGSGSEG 176 (241)
T ss_pred HHHHHhHhCCCcchh--hhhcCCcceEEEEeecc--------CCCceEEEeCCCCceEEecceeccccchH
Confidence 344678999997323 35788888877775522 22233479999999954333469998543
No 21
>KOG2692|consensus
Probab=33.02 E-value=35 Score=33.86 Aligned_cols=35 Identities=26% Similarity=0.265 Sum_probs=26.7
Q ss_pred EEcCCcccCCchhhHHhhccCCcEEEecCCCCCCccEEEECCEE
Q psy3917 46 VLGAQWGDEGKGKVVDMLAVDADLVCRCQGGNNAGHTVVVDSTE 89 (295)
Q Consensus 46 VvG~QwGDEGKGKivD~La~~~dvVvRfnGG~NAGHTVv~~g~k 89 (295)
+.|.+.|+| =.++|+|+|+|+.+-+|+.--++.++
T Consensus 166 L~~S~~G~e---------ID~~D~ViR~N~APt~gye~DVGsKT 200 (376)
T KOG2692|consen 166 LLNSRLGRE---------IDSHDFVIRLNLAPTKGYEKDVGSKT 200 (376)
T ss_pred eCCCccccc---------cccccEEEECCCCCccchhcccccce
Confidence 445666666 23789999999999999987776654
No 22
>COG1419 FlhF Flagellar GTP-binding protein [Cell motility and secretion]
Probab=32.71 E-value=10 Score=38.43 Aligned_cols=48 Identities=19% Similarity=0.306 Sum_probs=35.6
Q ss_pred HhcCcceEEeecccccCCCCce-------eEEEEEeeCCEEeecCCCCccccCCcEEEEEe
Q psy3917 240 MVNGYTKLCITKLDILDTFEEI-------KIGVAYKRHGKTLHYFPSNSSELAKVEYYVLI 293 (295)
Q Consensus 240 ~ing~~~lalTklDvL~~~~~i-------kic~~Y~~~G~~~~~~P~~~~~l~~~epvy~~ 293 (295)
+.-+++.+.+||+|=-..+-++ +.-++|-.+|++++ +++..+.|.|++
T Consensus 336 ~~~~i~~~I~TKlDET~s~G~~~s~~~e~~~PV~YvT~GQ~VP------eDI~va~~~~Lv 390 (407)
T COG1419 336 SLFPIDGLIFTKLDETTSLGNLFSLMYETRLPVSYVTNGQRVP------EDIVVANPDYLV 390 (407)
T ss_pred ccCCcceeEEEcccccCchhHHHHHHHHhCCCeEEEeCCCCCC------chhhhcChHHHH
Confidence 3467999999999977766542 66677988999774 566667776654
No 23
>PRK11372 lysozyme inhibitor; Provisional
Probab=31.02 E-value=49 Score=27.46 Aligned_cols=39 Identities=13% Similarity=0.119 Sum_probs=30.2
Q ss_pred hhhHHhhccCCcEEEecCCCCCCccEEE--ECCEEEEEeeccce
Q psy3917 57 GKVVDMLAVDADLVCRCQGGNNAGHTVV--VDSTEYDFHLVPSG 98 (295)
Q Consensus 57 GKivD~La~~~dvVvRfnGG~NAGHTVv--~~g~k~~l~llPSG 98 (295)
...+.|-|.+..+.|+|. |++.++. .+|+.|.|.+.||+
T Consensus 30 ~~~~~Y~C~~~~~~v~~~---~~~~~v~l~~~~~~~~L~~~~SA 70 (109)
T PRK11372 30 TDTLEYQCDEKPLTVKLN---NPRQEVSFVYDNQLLHLKQGISA 70 (109)
T ss_pred CCcEEEEeCCcEEEEEEE---CCCCeEEEEECCEEEEEEEeecc
Confidence 345789998888999995 4445554 59999999999964
No 24
>COG0800 Eda 2-keto-3-deoxy-6-phosphogluconate aldolase [Carbohydrate transport and metabolism]
Probab=28.92 E-value=57 Score=30.39 Aligned_cols=68 Identities=18% Similarity=0.258 Sum_probs=41.2
Q ss_pred eeEEcCCeEechHHHHHHHHHHHhCCCCCCCCCEEEeCCceecchhhhhhhchhhhhhCCCCcCC-CCCCc-cccccccc
Q psy3917 105 KSIIGNGVVIHLPGLFDELQKNENKGLTGWKDRLLISDRAHLVFDFHQQVDGLQEAEKGKKSLGT-TKKGI-GPAYSSKA 182 (295)
Q Consensus 105 ~~~IG~GvVvdp~~l~~Ei~~L~~~G~~~~~~rL~Is~rAhli~p~H~~lD~~~E~~~g~~~IGT-Tg~GI-Gpay~dK~ 182 (295)
.++||.|.|+||+++-+ +.+.| .++.+|+..+=-+ .+.... .|. +-=|+ -|+=.-.+
T Consensus 64 ~~lIGAGTVL~~~q~~~----a~~aG-----a~fiVsP~~~~ev---------~~~a~~---~~ip~~PG~~TptEi~~A 122 (211)
T COG0800 64 EALIGAGTVLNPEQARQ----AIAAG-----AQFIVSPGLNPEV---------AKAANR---YGIPYIPGVATPTEIMAA 122 (211)
T ss_pred ccEEccccccCHHHHHH----HHHcC-----CCEEECCCCCHHH---------HHHHHh---CCCcccCCCCCHHHHHHH
Confidence 47899999999999833 33334 4789999764321 111111 111 11222 24445677
Q ss_pred cccCceeeecc
Q psy3917 183 TRNGIRIADLL 193 (295)
Q Consensus 183 ~R~giRv~DL~ 193 (295)
.+.|.+...+|
T Consensus 123 le~G~~~lK~F 133 (211)
T COG0800 123 LELGASALKFF 133 (211)
T ss_pred HHcChhheeec
Confidence 78899988888
No 25
>COG3040 Blc Bacterial lipocalin [Cell envelope biogenesis, outer membrane]
Probab=27.18 E-value=1.5e+02 Score=27.09 Aligned_cols=77 Identities=23% Similarity=0.210 Sum_probs=52.3
Q ss_pred CCchhhHHhhccCCcEEEecCCCCCCccEEEECCEEEEEeeccceeecCCceeEEcCCeEechHHHHHHHHHHHhCCCCC
Q psy3917 54 EGKGKVVDMLAVDADLVCRCQGGNNAGHTVVVDSTEYDFHLVPSGIINPKAKSIIGNGVVIHLPGLFDELQKNENKGLTG 133 (295)
Q Consensus 54 EGKGKivD~La~~~dvVvRfnGG~NAGHTVv~~g~k~~l~llPSGil~~~~~~~IG~GvVvdp~~l~~Ei~~L~~~G~~~ 133 (295)
|||+||+|. +..+-+=|+|-|=.|.+--|..-...|..-++.|..-. -.=+++.-.-++.+.+-+=++.-++.|.+.
T Consensus 87 eGkA~i~~~-~~~a~LkVsF~~pF~g~Y~Vl~~d~eYs~aiVgsPdr~--ylWlLsRtP~~s~~~~~~ml~~ak~~Gfdv 163 (174)
T COG3040 87 EGKAKIVDN-ATRAKLKVSFFGPFYGDYWVLALDPEYSWAIVGSPDRE--YLWLLSRTPTLSQETLKRMLEIAKRRGFDV 163 (174)
T ss_pred cceEEEecC-ccccEEEEEecCCccccEEEEEECCCccEEEEeCCCcc--eEEEEecCCCCCHHHHHHHHHHHHHcCCCc
Confidence 799999998 44777899998845533334444455777776663321 234566666688888877777778889864
No 26
>PF09864 MliC: Membrane-bound lysozyme-inhibitor of c-type lysozyme; InterPro: IPR018660 This entry contains proteins that represent a novel family of bacterial lysozyme inhibitors with widespread homologues in Gram-negative bacteria, that may function as colonization or virulence factors in bacteria interacting with an animal host []. ; PDB: 3OE3_F 2F09_A 3F6Z_D.
Probab=26.24 E-value=63 Score=23.97 Aligned_cols=38 Identities=13% Similarity=0.206 Sum_probs=25.3
Q ss_pred hhc-cCCcEEEecCCCCCCccEEEECCEEEEEeecccee
Q psy3917 62 MLA-VDADLVCRCQGGNNAGHTVVVDSTEYDFHLVPSGI 99 (295)
Q Consensus 62 ~La-~~~dvVvRfnGG~NAGHTVv~~g~k~~l~llPSGi 99 (295)
|.| .+..+.|||....+.-=++..++..+.|.+.||+.
T Consensus 1 y~C~~~~~i~v~~~~~~~~~a~l~~~~~~~~L~~~~SaS 39 (72)
T PF09864_consen 1 YQCDNGQRISVTYINDDDPSAVLRYDDQEYTLPQAPSAS 39 (72)
T ss_dssp EEECCSCEEEEEEEECTTEEEEEECCTEEEEEEEECTSS
T ss_pred CCCCCCCEEEEEEcCCCCcEEEEEECCEEEEEEEeecCC
Confidence 345 45678888854333223455588999999999854
No 27
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=26.01 E-value=37 Score=33.79 Aligned_cols=36 Identities=25% Similarity=0.238 Sum_probs=22.1
Q ss_pred HHHHHhhHhcCcceEEeecccccCCCCceeEEEEEee
Q psy3917 233 PLLKYTSMVNGYTKLCITKLDILDTFEEIKIGVAYKR 269 (295)
Q Consensus 233 ~~lrya~~ing~~~lalTklDvL~~~~~ikic~~Y~~ 269 (295)
.+.|.=...-++|.+.|||||.=+ --.+-+.++|++
T Consensus 275 ~QAk~F~eav~l~GiIlTKlDgtA-KGG~il~I~~~l 310 (340)
T COG0552 275 SQAKIFNEAVGLDGIILTKLDGTA-KGGIILSIAYEL 310 (340)
T ss_pred HHHHHHHHhcCCceEEEEecccCC-CcceeeeHHHHh
Confidence 344444566779999999999332 223444455543
No 28
>TIGR01563 gp16_SPP1 phage head-tail adaptor, putative, SPP1 family. This family describes a small protein of about 100 amino acids found in bacteriophage and in bacterial prophage regions. Examples include gp9 of phage HK022 and gp16 of phage SPP1. This minor structural protein is suggested to be a head-tail adaptor protein (although the source of this annotation was not traced during construction of this model).
Probab=24.48 E-value=1.4e+02 Score=22.86 Aligned_cols=26 Identities=15% Similarity=0.203 Sum_probs=23.8
Q ss_pred cEEEecCCCCCCccEEEECCEEEEEe
Q psy3917 68 DLVCRCQGGNNAGHTVVVDSTEYDFH 93 (295)
Q Consensus 68 dvVvRfnGG~NAGHTVv~~g~k~~l~ 93 (295)
.+.+||..+-+..+.+.++|+.|...
T Consensus 57 ~~~iR~~~~i~~~~ri~~~g~~Y~I~ 82 (101)
T TIGR01563 57 VILIRYRKDVTNKMRVIYDGRIYTIG 82 (101)
T ss_pred EEEEeccCCCChhhEEEECCEEEEEE
Confidence 57899999999999999999999885
No 29
>PF09356 Phage_BR0599: Phage conserved hypothetical protein BR0599; InterPro: IPR018964 This entry describes the C-terminal region of a family of proteins found almost exclusively in phage or in prophage regions of bacterial genomes, including the phage-like Rhodobacter capsulatus (Rhodopseudomonas capsulata) gene transfer agent, which packages DNA. An apparent exception is Wolbachia pipientis wMel, a bacterial endosymbiont of the fruit fly, which has several candidate phage-related genes physically separate from obvious prophage regions.
Probab=21.41 E-value=1.9e+02 Score=22.59 Aligned_cols=43 Identities=14% Similarity=0.119 Sum_probs=26.6
Q ss_pred EEecCCCCCCccEEEE---CCEEEEEeeccceeecCCceeEEcCCe
Q psy3917 70 VCRCQGGNNAGHTVVV---DSTEYDFHLVPSGIINPKAKSIIGNGV 112 (295)
Q Consensus 70 VvRfnGG~NAGHTVv~---~g~k~~l~llPSGil~~~~~~~IG~Gv 112 (295)
.++|..|+|+|.+..+ .+....|..=+.--+..+....|-+||
T Consensus 8 ~l~~~~g~~~g~~~~I~~h~~~~l~L~~p~~~~~~~G~~v~l~~GC 53 (80)
T PF09356_consen 8 VLTWTSGANAGERREIKSHEGGTLTLWRPLPAGLAVGDTVTLYPGC 53 (80)
T ss_pred EEEEecCCCCCCEEEEEEccCCEEEEeccCcccCCCCCEEEEEeCC
Confidence 5899999999998776 355555543333123334444555665
Done!