Query psy3918
Match_columns 668
No_of_seqs 382 out of 2746
Neff 8.1
Searched_HMMs 29240
Date Fri Aug 16 20:43:24 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3918.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/3918hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4b9q_A Chaperone protein DNAK; 100.0 1.8E-96 6E-101 840.6 63.2 537 57-634 2-604 (605)
2 2kho_A Heat shock protein 70; 100.0 1.5E-93 5.3E-98 816.4 54.0 537 57-634 2-604 (605)
3 3d2f_A Heat shock protein homo 100.0 1.8E-90 6.2E-95 796.8 56.9 540 57-641 2-633 (675)
4 1yuw_A Heat shock cognate 71 k 100.0 1.2E-83 4.2E-88 728.0 39.3 481 54-577 1-553 (554)
5 2v7y_A Chaperone protein DNAK; 100.0 1.8E-76 6.2E-81 664.1 44.5 447 57-567 2-509 (509)
6 3i33_A Heat shock-related 70 k 100.0 9E-51 3.1E-55 443.7 32.9 313 56-374 22-403 (404)
7 1dkg_D Molecular chaperone DNA 100.0 1.9E-50 6.6E-55 437.9 31.3 315 58-373 3-383 (383)
8 3qfu_A 78 kDa glucose-regulate 100.0 2.8E-50 9.5E-55 438.1 31.9 312 56-373 17-394 (394)
9 4gni_A Putative heat shock pro 100.0 4.8E-49 1.6E-53 430.7 30.3 310 57-374 13-403 (409)
10 4e81_A Chaperone protein DNAK; 100.0 5.2E-41 1.8E-45 332.1 29.6 216 379-634 1-216 (219)
11 1u00_A HSC66, chaperone protei 100.0 1.3E-37 4.5E-42 310.7 31.0 216 382-637 1-216 (227)
12 3n8e_A Stress-70 protein, mito 100.0 3.9E-33 1.3E-37 266.8 15.9 165 376-577 17-181 (182)
13 1jce_A ROD shape-determining p 100.0 5.9E-31 2E-35 280.7 18.0 270 58-373 4-327 (344)
14 3h0x_A 78 kDa glucose-regulate 100.0 1.9E-30 6.4E-35 242.0 16.3 150 381-567 2-152 (152)
15 3dob_A Heat shock 70 kDa prote 100.0 1.3E-30 4.4E-35 242.7 14.7 150 381-567 2-152 (152)
16 3dqg_A Heat shock 70 kDa prote 100.0 7.6E-31 2.6E-35 243.9 12.3 150 381-567 2-151 (151)
17 2op6_A Heat shock 70 kDa prote 100.0 3.9E-28 1.3E-32 227.5 15.3 150 381-567 2-152 (152)
18 1q5l_A Chaperone protein DNAK; 99.9 8.6E-23 3E-27 186.3 11.5 121 376-533 14-134 (135)
19 3h1q_A Ethanolamine utilizatio 99.8 8.4E-18 2.9E-22 172.7 18.5 170 169-369 70-272 (272)
20 2ych_A Competence protein PILM 99.8 3.2E-19 1.1E-23 192.3 8.1 279 57-370 13-373 (377)
21 2fxu_A Alpha-actin-1, actin, a 99.7 3.8E-17 1.3E-21 175.9 9.4 254 58-370 6-348 (375)
22 1k8k_A ARP3, actin-like protei 99.7 2.1E-16 7.2E-21 172.6 12.3 177 191-371 107-387 (418)
23 2fsj_A Hypothetical protein TA 99.7 4.3E-17 1.5E-21 173.4 5.1 180 162-370 91-343 (346)
24 4a2a_A Cell division protein F 99.6 1.1E-14 3.9E-19 158.3 17.8 159 206-371 169-393 (419)
25 3lof_A Heat shock 70 kDa prote 99.4 6.8E-13 2.3E-17 117.2 10.1 82 555-636 3-86 (113)
26 4ehu_A Activator of 2-hydroxyi 99.3 1.7E-13 5.8E-18 141.0 2.2 75 295-373 182-256 (276)
27 2zgy_A Plasmid segregation pro 99.3 1.3E-13 4.5E-18 144.9 0.8 72 292-369 245-319 (320)
28 2p32_A Heat shock 70 kDa prote 99.3 2.1E-12 7.1E-17 115.3 5.4 85 556-640 13-99 (120)
29 1k8k_B ARP2, actin-like protei 99.3 7.3E-13 2.5E-17 143.3 1.5 170 192-370 105-363 (394)
30 1ud0_A HSC70, 70 kDa heat-shoc 99.2 4.4E-12 1.5E-16 112.1 2.7 88 559-646 2-91 (113)
31 3js6_A Uncharacterized PARM pr 98.5 8.8E-07 3E-11 93.9 13.2 74 293-374 264-339 (355)
32 4apw_A ALP12; actin-like prote 98.4 2.4E-07 8.3E-12 97.3 5.5 77 290-372 249-325 (329)
33 3qb0_A Actin-related protein 4 98.2 4.3E-06 1.5E-10 91.9 10.8 65 306-370 394-470 (498)
34 3dwl_A Actin-related protein 3 98.1 1.3E-06 4.4E-11 94.8 4.5 198 170-370 103-395 (427)
35 4fo0_A Actin-related protein 8 97.8 0.00017 5.6E-09 81.8 15.1 48 324-371 501-564 (593)
36 1hux_A Activator of (R)-2-hydr 96.6 0.0042 1.4E-07 62.9 7.9 73 296-372 185-257 (270)
37 3l0q_A Xylulose kinase; xlylul 95.9 0.012 4.2E-07 65.8 8.2 85 289-374 408-492 (554)
38 3hz6_A Xylulokinase; xylulose, 95.9 0.011 3.8E-07 65.4 7.7 76 298-375 379-454 (511)
39 2itm_A Xylulose kinase, xylulo 95.9 0.0095 3.3E-07 65.5 7.1 77 298-374 361-437 (484)
40 4bc3_A Xylulose kinase; transf 95.9 0.014 4.9E-07 65.0 8.5 77 296-373 407-483 (538)
41 2zf5_O Glycerol kinase; hypert 95.8 0.014 4.7E-07 64.5 7.8 76 297-374 368-443 (497)
42 3ll3_A Gluconate kinase; xylul 95.8 0.014 4.7E-07 64.6 7.7 77 298-375 368-444 (504)
43 1nbw_A Glycerol dehydratase re 95.7 0.0041 1.4E-07 67.8 2.7 79 289-369 509-604 (607)
44 3i8b_A Xylulose kinase; strain 95.6 0.013 4.4E-07 65.0 6.3 51 323-374 424-474 (515)
45 2d0o_A DIOL dehydratase-reacti 95.5 0.0037 1.3E-07 67.9 1.6 80 289-370 507-603 (610)
46 3ezw_A Glycerol kinase; glycer 95.4 0.025 8.5E-07 62.9 8.1 67 305-375 387-453 (526)
47 3g25_A Glycerol kinase; IDP007 95.2 0.02 6.9E-07 63.2 6.5 52 323-375 404-455 (501)
48 4e1j_A Glycerol kinase; struct 95.2 0.015 5.2E-07 64.5 5.3 52 323-375 425-476 (520)
49 3ifr_A Carbohydrate kinase, FG 95.1 0.019 6.6E-07 63.5 5.9 51 323-374 400-450 (508)
50 3h3n_X Glycerol kinase; ATP-bi 95.1 0.021 7E-07 63.2 6.2 52 323-375 403-454 (506)
51 3jvp_A Ribulokinase; PSI-II, N 95.1 0.021 7.1E-07 64.2 6.2 76 298-374 414-490 (572)
52 2dpn_A Glycerol kinase; thermu 95.1 0.035 1.2E-06 61.1 7.9 51 323-374 398-448 (495)
53 2p3r_A Glycerol kinase; glycer 95.0 0.023 7.8E-07 62.9 5.9 52 323-375 401-452 (510)
54 4e81_A Chaperone protein DNAK; 94.9 0.098 3.4E-06 50.9 9.5 33 425-457 1-33 (219)
55 2d4w_A Glycerol kinase; alpha 94.5 0.064 2.2E-06 59.2 7.9 80 291-374 373-453 (504)
56 2w40_A Glycerol kinase, putati 94.4 0.037 1.3E-06 61.1 5.9 73 298-374 384-457 (503)
57 2uyt_A Rhamnulokinase; rhamnos 94.0 0.054 1.8E-06 59.5 5.9 77 289-370 361-438 (489)
58 2ews_A Pantothenate kinase; PA 93.4 0.15 5E-06 51.8 7.6 46 324-369 237-286 (287)
59 3n8e_A Stress-70 protein, mito 91.7 0.074 2.5E-06 50.2 2.4 37 421-457 16-52 (182)
60 3h6e_A Carbohydrate kinase, FG 91.4 0.15 5.2E-06 55.8 5.0 77 288-372 357-436 (482)
61 1q5l_A Chaperone protein DNAK; 91.3 0.058 2E-06 48.3 1.3 36 423-458 15-50 (135)
62 3dob_A Heat shock 70 kDa prote 91.0 0.075 2.6E-06 48.6 1.7 31 427-457 2-32 (152)
63 3dqg_A Heat shock 70 kDa prote 90.6 0.086 2.9E-06 48.2 1.7 31 427-457 2-32 (151)
64 3h0x_A 78 kDa glucose-regulate 90.4 0.12 3.9E-06 47.4 2.4 31 427-457 2-32 (152)
65 4b9q_A Chaperone protein DNAK; 88.2 1.3 4.6E-05 49.7 9.6 40 418-457 382-421 (605)
66 2i7n_A Pantothenate kinase 1; 87.9 0.66 2.3E-05 48.4 6.2 46 324-369 306-358 (360)
67 2op6_A Heat shock 70 kDa prote 86.6 0.29 1E-05 44.5 2.4 31 427-457 2-32 (152)
68 2kho_A Heat shock protein 70; 85.1 4.1 0.00014 45.7 11.4 40 418-457 382-421 (605)
69 1u00_A HSC66, chaperone protei 81.4 0.64 2.2E-05 45.3 2.4 30 428-457 1-30 (227)
70 3ifr_A Carbohydrate kinase, FG 76.9 1.6 5.4E-05 48.0 4.1 25 52-76 2-26 (508)
71 4e1j_A Glycerol kinase; struct 74.1 2.5 8.5E-05 46.5 4.7 26 51-76 20-45 (520)
72 3ll3_A Gluconate kinase; xylul 70.7 2.9 9.9E-05 45.8 4.2 21 56-76 3-23 (504)
73 1iv0_A Hypothetical protein; r 70.0 3.2 0.00011 34.6 3.4 19 58-76 2-20 (98)
74 3h6e_A Carbohydrate kinase, FG 68.5 2.6 9E-05 45.9 3.3 20 56-75 5-24 (482)
75 3d2f_A Heat shock protein homo 67.9 14 0.00046 42.0 9.1 36 422-457 389-428 (675)
76 2uyt_A Rhamnulokinase; rhamnos 67.1 3.2 0.00011 45.2 3.6 21 55-75 2-22 (489)
77 1nu0_A Hypothetical protein YQ 65.7 4.7 0.00016 35.9 3.8 21 57-77 3-23 (138)
78 3ttc_A HYPF, transcriptional r 64.8 17 0.00058 40.9 8.9 63 304-371 585-651 (657)
79 3i8b_A Xylulose kinase; strain 64.4 4.7 0.00016 44.2 4.3 20 56-75 4-23 (515)
80 3eno_A Putative O-sialoglycopr 63.9 16 0.00054 37.5 8.0 68 302-374 233-306 (334)
81 3nmd_A CGMP dependent protein 63.0 23 0.00079 27.4 6.6 43 543-585 29-71 (72)
82 3ezw_A Glycerol kinase; glycer 62.9 4.7 0.00016 44.3 4.0 20 56-75 3-22 (526)
83 3l0q_A Xylulose kinase; xlylul 61.9 5.4 0.00018 44.2 4.2 21 56-76 4-24 (554)
84 3vth_A Hydrogenase maturation 60.8 23 0.00079 40.6 9.2 65 304-373 679-749 (761)
85 2ivn_A O-sialoglycoprotein end 60.2 17 0.00058 37.2 7.4 65 302-371 228-298 (330)
86 1vhx_A Putative holliday junct 60.1 5.6 0.00019 35.9 3.3 20 57-76 3-22 (150)
87 1hjr_A Holliday junction resol 59.6 9.2 0.00031 34.8 4.6 18 58-75 2-19 (158)
88 2p3r_A Glycerol kinase; glycer 59.0 6.2 0.00021 43.2 4.0 20 57-76 3-22 (510)
89 3h3n_X Glycerol kinase; ATP-bi 58.5 7.3 0.00025 42.5 4.5 21 56-76 4-24 (506)
90 1hux_A Activator of (R)-2-hydr 58.5 6.4 0.00022 39.1 3.7 19 58-76 4-22 (270)
91 4bc3_A Xylulose kinase; transf 58.4 6.8 0.00023 43.2 4.2 21 56-76 9-29 (538)
92 4g9i_A Hydrogenase maturation 58.1 28 0.00095 40.1 9.3 61 306-371 693-759 (772)
93 4fla_A Regulation of nuclear P 58.0 70 0.0024 28.7 10.1 98 533-630 21-142 (152)
94 3jvp_A Ribulokinase; PSI-II, N 57.2 6.7 0.00023 43.6 3.9 21 56-76 4-24 (572)
95 3hz6_A Xylulokinase; xylulose, 56.7 7 0.00024 42.8 3.9 21 56-76 4-24 (511)
96 2w40_A Glycerol kinase, putati 56.1 7.6 0.00026 42.3 4.1 20 57-76 4-23 (503)
97 2dpn_A Glycerol kinase; thermu 54.8 7.2 0.00025 42.4 3.6 19 58-76 3-21 (495)
98 2v7y_A Chaperone protein DNAK; 53.5 5.1 0.00017 43.9 2.1 38 420-457 353-390 (509)
99 3cqy_A Anhydro-N-acetylmuramic 53.3 29 0.00099 36.0 7.7 69 296-370 266-341 (370)
100 2zf5_O Glycerol kinase; hypert 53.1 8.8 0.0003 41.7 4.0 20 57-76 3-22 (497)
101 4ep4_A Crossover junction endo 52.9 13 0.00044 34.1 4.4 18 58-75 2-19 (166)
102 3g25_A Glycerol kinase; IDP007 52.7 8.9 0.00031 41.8 3.9 20 57-76 6-25 (501)
103 3djc_A Type III pantothenate k 52.6 9.5 0.00033 37.9 3.8 71 289-369 181-253 (266)
104 3r8e_A Hypothetical sugar kina 52.4 32 0.0011 34.8 7.9 47 324-370 261-318 (321)
105 3qbx_A Anhydro-N-acetylmuramic 52.4 40 0.0014 35.0 8.5 72 297-371 260-336 (371)
106 2e2o_A Hexokinase; acetate and 51.4 18 0.0006 36.2 5.7 47 323-370 239-286 (299)
107 2ews_A Pantothenate kinase; PA 46.6 12 0.0004 37.7 3.3 22 56-77 19-40 (287)
108 1yuw_A Heat shock cognate 71 k 46.3 9 0.00031 42.4 2.7 36 422-457 388-423 (554)
109 2itm_A Xylulose kinase, xylulo 46.0 12 0.00041 40.5 3.6 18 59-76 2-19 (484)
110 1nbw_A Glycerol dehydratase re 45.7 9.9 0.00034 41.6 2.8 29 192-220 131-159 (607)
111 4db3_A Glcnac kinase, N-acetyl 45.2 42 0.0014 34.0 7.5 46 324-369 270-324 (327)
112 4htl_A Beta-glucoside kinase; 45.0 40 0.0014 33.6 7.2 48 324-371 238-291 (297)
113 2d4w_A Glycerol kinase; alpha 45.0 13 0.00046 40.4 3.8 19 58-76 3-21 (504)
114 1zc6_A Probable N-acetylglucos 44.1 18 0.0006 36.4 4.3 64 298-370 227-292 (305)
115 1hnj_A Beta-ketoacyl-acyl carr 43.3 26 0.00089 35.2 5.5 51 297-350 211-261 (317)
116 2ch5_A NAGK protein; transfera 42.8 16 0.00055 37.3 3.8 20 57-76 6-25 (347)
117 3ven_A O-carbamoyltransferase 42.4 70 0.0024 35.3 9.0 67 304-375 293-361 (576)
118 3vov_A Glucokinase, hexokinase 41.6 51 0.0017 32.9 7.3 47 324-370 238-294 (302)
119 2qm1_A Glucokinase; alpha-beta 41.2 60 0.0021 32.4 7.9 48 324-371 263-321 (326)
120 2aa4_A Mannac kinase, putative 41.1 33 0.0011 33.8 5.8 46 324-369 234-286 (289)
121 1uk5_A BAG-family molecular ch 40.5 1.7E+02 0.0057 24.7 9.8 60 578-637 47-106 (111)
122 2zqm_A Prefoldin beta subunit 39.1 1.7E+02 0.0057 24.3 11.6 80 555-638 21-113 (117)
123 2gup_A ROK family protein; sug 39.0 61 0.0021 31.9 7.4 47 324-370 228-286 (292)
124 1zbs_A Hypothetical protein PG 38.6 21 0.00071 35.6 3.8 69 297-371 210-280 (291)
125 2e2o_A Hexokinase; acetate and 38.2 17 0.00057 36.3 3.0 19 58-76 3-21 (299)
126 1zbs_A Hypothetical protein PG 37.7 11 0.00037 37.7 1.5 19 59-77 2-20 (291)
127 2odv_A Plectin 1, HD1; plakin 37.5 2.5E+02 0.0086 26.9 11.2 44 534-579 41-84 (235)
128 2ebd_A 3-oxoacyl-[acyl-carrier 37.0 35 0.0012 34.0 5.3 48 300-350 206-253 (309)
129 1ub7_A 3-oxoacyl-[acyl-carrier 36.5 34 0.0012 34.4 5.1 50 298-350 214-263 (322)
130 3zyy_X Iron-sulfur cluster bin 36.3 42 0.0014 37.5 6.0 57 287-344 499-555 (631)
131 3vgl_A Glucokinase; ROK family 36.1 20 0.00067 36.4 3.2 20 57-76 2-21 (321)
132 1saz_A Probable butyrate kinas 36.1 29 0.00099 36.2 4.6 48 323-370 295-347 (381)
133 1zc6_A Probable N-acetylglucos 35.1 22 0.00076 35.6 3.4 20 57-76 11-30 (305)
134 3vov_A Glucokinase, hexokinase 33.7 24 0.0008 35.5 3.3 20 58-77 2-21 (302)
135 1zxo_A Conserved hypothetical 33.6 6.7 0.00023 39.3 -0.9 68 299-370 210-277 (291)
136 1mzj_A Beta-ketoacylsynthase I 32.1 48 0.0016 33.6 5.4 48 300-350 227-274 (339)
137 3vgl_A Glucokinase; ROK family 32.0 1.1E+02 0.0036 30.7 8.0 47 324-370 253-311 (321)
138 4htl_A Beta-glucoside kinase; 31.2 26 0.00088 35.0 3.1 19 57-75 4-22 (297)
139 1zxo_A Conserved hypothetical 31.1 20 0.00067 35.8 2.1 17 59-75 2-18 (291)
140 1f5n_A Interferon-induced guan 31.0 1.8E+02 0.006 32.2 10.0 60 565-631 523-582 (592)
141 2qm1_A Glucokinase; alpha-beta 30.8 28 0.00095 35.1 3.2 20 57-76 6-25 (326)
142 1zow_A 3-oxoacyl-[acyl-carrier 30.7 86 0.0029 31.1 7.0 50 298-350 206-255 (313)
143 1sz2_A Glucokinase, glucose ki 29.8 31 0.0011 35.0 3.4 21 55-75 12-32 (332)
144 3ls0_A SLL1638 protein, PSBQ; 29.8 1.3E+02 0.0044 26.3 6.7 73 533-605 16-98 (133)
145 1ugo_A BCL2-associated athanog 29.7 2.1E+02 0.0071 23.6 7.6 60 577-636 34-93 (99)
146 3bex_A Type III pantothenate k 29.5 33 0.0011 33.5 3.4 21 58-78 4-24 (249)
147 2yhx_A Hexokinase B; transfera 29.3 37 0.0013 36.4 4.1 74 297-373 356-444 (457)
148 1bdg_A Hexokinase; phosphotran 29.2 36 0.0012 36.5 3.9 21 55-75 66-86 (451)
149 2x3e_A 3-oxoacyl-[acyl-carrier 29.2 56 0.0019 33.0 5.3 49 299-350 219-267 (331)
150 2h3g_X Biosynthetic protein; p 28.8 38 0.0013 33.5 3.8 72 290-370 180-251 (268)
151 1msz_A DNA-binding protein smu 28.8 44 0.0015 26.9 3.3 27 194-220 34-60 (86)
152 1saz_A Probable butyrate kinas 27.9 45 0.0015 34.7 4.4 21 57-77 2-22 (381)
153 1u6e_A 3-oxoacyl-[acyl-carrier 27.9 65 0.0022 32.4 5.5 47 301-350 229-275 (335)
154 3htv_A D-allose kinase, alloki 26.7 1.1E+02 0.0039 30.4 7.1 48 323-370 239-298 (310)
155 2a01_A Apolipoprotein A-I; fou 26.3 76 0.0026 30.7 5.4 68 538-605 111-187 (243)
156 2ra1_A Surface layer protein; 25.7 2E+02 0.0067 29.8 8.2 55 562-616 160-216 (412)
157 2yhw_A Bifunctional UDP-N-acet 25.5 39 0.0013 34.3 3.3 21 56-76 29-49 (343)
158 3epq_A Putative fructokinase; 25.3 38 0.0013 34.0 3.1 20 57-76 3-22 (302)
159 2hoe_A N-acetylglucosamine kin 25.2 1.4E+02 0.0046 30.8 7.5 47 324-370 315-370 (380)
160 2dfs_A Myosin-5A; myosin-V, in 25.1 6.1E+02 0.021 30.2 13.8 24 197-220 295-318 (1080)
161 1woq_A Inorganic polyphosphate 25.0 44 0.0015 32.6 3.4 19 57-75 12-30 (267)
162 3epq_A Putative fructokinase; 24.9 1.5E+02 0.0051 29.4 7.5 48 323-370 224-288 (302)
163 4dfe_A 3-oxoacyl-[acyl-carrier 24.6 83 0.0028 31.8 5.6 51 298-351 228-278 (333)
164 3lay_A Zinc resistance-associa 24.5 4E+02 0.014 24.2 9.8 19 533-551 67-85 (175)
165 3htv_A D-allose kinase, alloki 24.3 43 0.0015 33.6 3.3 21 56-76 6-26 (310)
166 2f9w_A Pantothenate kinase; CO 24.3 53 0.0018 32.5 3.8 21 58-78 24-45 (271)
167 1ted_A PKS18; thiolase fold, s 24.0 76 0.0026 33.0 5.3 49 299-350 282-330 (393)
168 4db3_A Glcnac kinase, N-acetyl 23.8 53 0.0018 33.2 3.9 18 58-75 25-42 (327)
169 1z6r_A MLC protein; transcript 23.3 46 0.0016 34.8 3.3 21 56-76 84-104 (406)
170 2gup_A ROK family protein; sug 23.1 39 0.0013 33.4 2.7 18 58-75 5-22 (292)
171 2hoe_A N-acetylglucosamine kin 22.5 42 0.0014 34.8 2.8 21 56-76 86-106 (380)
172 3o8m_A Hexokinase; rnaseh-like 22.3 55 0.0019 35.4 3.7 21 55-75 78-98 (485)
173 2q2r_A Glucokinase 1, putative 22.2 53 0.0018 33.8 3.6 21 56-76 28-48 (373)
174 1m1j_B Fibrinogen beta chain; 21.9 7.2E+02 0.025 26.3 12.2 13 613-625 179-191 (464)
175 3r8e_A Hypothetical sugar kina 21.6 51 0.0017 33.2 3.2 22 55-76 17-38 (321)
176 3mcp_A Glucokinase; structural 21.2 70 0.0024 33.1 4.2 21 56-76 8-28 (366)
177 2hc5_A ORF 99, hypothetical pr 21.1 1.2E+02 0.004 25.9 4.8 45 499-550 56-101 (117)
178 3nuw_A 2-OXO-3-deoxygalactonat 21.1 65 0.0022 32.3 3.7 43 325-369 248-290 (295)
179 1z05_A Transcriptional regulat 21.0 50 0.0017 34.8 3.1 21 56-76 107-127 (429)
180 2aa4_A Mannac kinase, putative 20.9 52 0.0018 32.3 3.1 18 58-75 2-19 (289)
181 4ewp_A 3-oxoacyl-[acyl-carrier 20.8 84 0.0029 31.9 4.7 46 306-351 66-113 (350)
182 3zsu_A TLL2057 protein, cyanoq 20.8 1.4E+02 0.0049 25.9 5.3 73 533-605 14-95 (130)
183 2e1z_A Propionate kinase; TDCD 20.5 1.7E+02 0.0058 30.7 6.9 26 322-347 329-355 (415)
184 1vh6_A Flagellar protein FLIS; 20.2 4.4E+02 0.015 23.1 8.7 24 555-578 48-71 (145)
No 1
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=100.00 E-value=1.8e-96 Score=840.59 Aligned_cols=537 Identities=60% Similarity=0.911 Sum_probs=513.8
Q ss_pred ceEEEEEcCCceEEEEEEeCCeeeEecCCCCCccccEEEEEecCCcEEEcHHHHHhhhhCCCchhhHhhhhhCCCCCChH
Q psy3918 57 GQVIGIDLGTTNSCVAVMEGKQAKVIENSEGSRTTPSVVAFTKDGERLVGTPARRQAVTNSANTFYATKRLIGRRFDDPE 136 (668)
Q Consensus 57 ~~vvGIDlGTt~s~vA~~~~~~~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~~i~~~KrllG~~~~d~~ 136 (668)
+.+|||||||||||||++.+|.+++|.|..|++++||+|+|.++++++||..|+.++..+|.++++++|||||+.++++.
T Consensus 2 ~~viGIDlGTT~S~Va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~~ 81 (605)
T 4b9q_A 2 GKIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGCTLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEE 81 (605)
T ss_dssp CCEEEEECCSSEEEEEEEETTEEEECCCTTSCSSEECCEEECTTSCEEESHHHHHTTTTCGGGEECCGGGTTTCBTTSHH
T ss_pred CcEEEEEcCCCcEEEEEEECCEEEEEECCCCCcccceEEEEeCCCcEEecHHHHHHHHhCCCcEehhhHHhhCCCCCCHH
Confidence 46999999999999999999999999999999999999999878899999999999999999999999999999999999
Q ss_pred HHHhhccCceEEEEcCCCCeeEeCCCCceeChhhHHHHHHHHHHHHHHHhhcCCCCcEEEeeCCCCCHHHHHHHHHHHHH
Q psy3918 137 IKKDMKNLSYKIVRASNGDAWVQGSDEKVYSPSQIGAFVLMKMKETSEAFLNTSVKNAVITVPAYFNDSQRQATKDAGQI 216 (668)
Q Consensus 137 v~~~~~~~p~~~~~~~~~~~~i~~~~~~~~~~~ev~a~iL~~lk~~ae~~l~~~~~~~VITVPa~f~~~qR~a~~~Aa~~ 216 (668)
++.+.+++||.++...++.+++. ..++.++|+++++++|++|++.|+.++|.++.++||||||||++.||++|++||++
T Consensus 82 v~~~~~~~p~~~~~~~~g~~~~~-~~~~~~~p~ei~a~iL~~lk~~ae~~lg~~v~~~VITVPa~f~~~qr~a~~~Aa~~ 160 (605)
T 4b9q_A 82 VQRDVSIMPFKIIAADNGDAWVE-VKGQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRI 160 (605)
T ss_dssp HHHHHTTCSSEEEECTTSBEEEE-ETTEEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHHHHH
T ss_pred HHHHhhcCCeEEEEcCCCceEEE-ECCEEECHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 99999999999999999988887 56789999999999999999999999999999999999999999999999999999
Q ss_pred cCCC--------------------------------------------C----CeEEEEeccCCCcccccccCc------
Q psy3918 217 AGLN--------------------------------------------K----GVFEVKSTNGDTLLGGEGLDI------ 242 (668)
Q Consensus 217 AGl~--------------------------------------------~----g~~~V~~~~gd~~lGG~~iD~------ 242 (668)
|||+ . +.|+|+++.||.+|||++||.
T Consensus 161 AGl~v~~li~EP~AAAlaygl~~~~~~~~vlV~DlGGGT~Dvsi~~~~~~~~~~~~evla~~gd~~lGG~d~D~~l~~~l 240 (605)
T 4b9q_A 161 AGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGAFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYL 240 (605)
T ss_dssp TTCEEEEEEEHHHHHHHHHHTTSCCSSEEEEEEEECSSCEEEEEEEEEESSSCEEEEEEEEEEETTCSHHHHHHHHHHHH
T ss_pred cCCceEEEeCcHHHHHHHhhhhccCCCCEEEEEECCCCeEEEEEEEEecCCCCceEEEEEecCCCCcChHHHHHHHHHHH
Confidence 9998 2 677888999999999997763
Q ss_pred ------------cccHHHHHHHHHHHHHHHHHhCCCcceeeecccccccCCCCcceEEEeeHHHHHHHHHHHHHHHHHHH
Q psy3918 243 ------------RKDQMAMQRLKEAAEKAKIELSSSVQTDINLPYLTMDAGGPKHMNLKLTRSKFESLVGDLIKKTVNPC 310 (668)
Q Consensus 243 ------------~~~~~~~~rL~~~aE~~K~~LS~~~~~~i~i~~l~~~~~~~~~~~~~iTr~efe~l~~~l~~~i~~~i 310 (668)
..+++++.+|+.+||++|+.||....+.++++++..+..++.++.++|||++|+++++|+++++..+|
T Consensus 241 ~~~f~~~~~~~~~~~~~~~~~L~~~aE~~K~~Ls~~~~~~i~~~~~~~~~~g~~~~~~~itr~~~e~l~~~~~~~i~~~v 320 (605)
T 4b9q_A 241 VEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIEPL 320 (605)
T ss_dssp HHHHHHHTCCCGGGCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEEECSSSEEEEEEEEEHHHHHHHHHHHHHHTTHHH
T ss_pred HHHHhhhcCCCcccCHHHHHHHHHHHHHHHHhcCcCCCeEEEEeeeccCCCCCeeEEEEEeHHHHHHHHHHHHHHHHHHH
Confidence 45788999999999999999999999999999887776666789999999999999999999999999
Q ss_pred HHHHHHcCCCCCCCceEEEecCccCcHHHHHHHHHHhCCCCCCCCCchhHHHhhHHHhhhhhcCCCCceEEeeeccceeE
Q psy3918 311 QKALQDADCKNSDIGEVLLVGGMTRMPKVQSTVQEIFGKVPSRAVNPDEAVAIGAAVQGGVLAGDVTDVLLLDVTPLSLG 390 (668)
Q Consensus 311 ~~~L~~a~~~~~~I~~ViLVGGssriP~V~~~l~~~Fg~~~~~~~npdeaVA~GAai~aa~ls~~~~~~~~~d~~~~slg 390 (668)
+++|+++++...+|+.|+||||+||+|+|+++|+++||.++...+||++|||+|||++|+.+++..+++++.|++|++||
T Consensus 321 ~~~L~~a~~~~~~i~~VvLvGG~sriP~v~~~l~~~fg~~~~~~~nPdeaVA~GAai~a~~l~~~~~~~~l~dv~p~slg 400 (605)
T 4b9q_A 321 KVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTGDVKDVLLLDVTPLSLG 400 (605)
T ss_dssp HHHHHHTTCCGGGCSEEEEESGGGGSHHHHHHHHHHHTSCCCSSSCTTTHHHHHHHHHHHHHHTSSCSEEEECBCSSCEE
T ss_pred HHHHHHcCCCHHHCcEEEEeCCccCchHHHHHHHHHhccCcCCCcChhHHHHHhHHHHHHHhcCCCCceEEEeeeeeEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCEEEEEeeCCCCCCccceecccccCCccceeeeeccccccccccccceeEEeeecCcccCCCCCcceEEEEEeec
Q psy3918 391 IETLGGVFTRLITRNTTIPTKKSQGGVLAGDVTDVLLLDVTPLSLGIETLGGVFTRLITRNTTIPTKKSQTQVEIKVHQG 470 (668)
Q Consensus 391 i~~~~~~~~~ii~r~~~iP~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~f~~~~~~n~~~p~~~~q~~~~i~i~~g 470 (668)
|++.+|.|.++|+||++||+++++. |++ ..|+|+.+.|.||||
T Consensus 401 ie~~~g~~~~ii~rnt~iP~~~~~~----------------------------f~t---------~~d~q~~v~i~v~~g 443 (605)
T 4b9q_A 401 IETMGGVMTTLIAKNTTIPTKHSQV----------------------------FST---------AEDNQSAVTIHVLQG 443 (605)
T ss_dssp EEETTTEEEEEECTTCBSSEEEEEE----------------------------ECC---------SSTTCCEEEEEEEES
T ss_pred EEEcCCEEEEEEeCCCcCCcceEEE----------------------------eee---------ecccCceEEEEEEec
Confidence 9999999999999999999999988 988 999999999999999
Q ss_pred CccccccCceeeeEEEeCCCCCCCCCCceEEEEEeCCCceEEEEeeecCCCceeEEEEccCCCCCHHHHHHHHHHHHHHH
Q psy3918 471 EREMAADNKLLGQFTLVGIPPAPRGVPQIEVTFDIDANGIVHVSARDKGTGKEQQIVIQSSGGLSKDEIENMVKNAEQYA 550 (668)
Q Consensus 471 e~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~id~~Gil~v~a~~~~t~~~~~~~i~~~~~ls~~ei~~~~~~~~~~~ 550 (668)
|+..+.+|..||+|.|.|+||+|+|.++|+|+|++|.||+|+|++.++.||++.+++|..+.+||++||++|++++++|.
T Consensus 444 e~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~id~~gil~v~a~~~~tg~~~~i~i~~~~~ls~~ei~~~~~~~~~~~ 523 (605)
T 4b9q_A 444 ERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSGLNEDEIQKMVRDAEANA 523 (605)
T ss_dssp SCSBGGGSEEEEEEEEECCCCCSTTCCCEEEEEEECTTSCEEEEEEETTTCCEECCEEESCCSCCHHHHHHHHHHHHHHH
T ss_pred cccccccCCEeeEEEEeCCCCCcCCCceEEEEEEEcCCcEEEEEEEecCCCcEEEEEecCCCCCCHHHHHHHHHHhhhhH
Confidence 99999999999999999999999999999999999999999999999999999999999888999999999999999999
Q ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH
Q psy3918 551 TEDKVKRDRVEALNQAESIVHDTESKMEEFKAQLPAEECAKLKEQIAELQKLIANKDSVDPEELRKATTTLQQASLKLFE 630 (668)
Q Consensus 551 ~~D~~~~~~~ea~N~lE~~i~~~~~~l~~~~~~~~~~e~~~i~~~l~~~~~wl~~~~~~~~~~~~~~~~~L~~~~~~i~~ 630 (668)
.+|++.+++.+++|+||+|+|++++.|+++...+++++++++.+.++++++||+++ +.++|++++++|++.+.+++.
T Consensus 524 ~~d~~~~~~~~~~n~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~l~~~~~~~~~ 600 (605)
T 4b9q_A 524 EADRKCEELVQTRNQGDHLLHSTRKQVEEAGDKLPADDKTAIESALTALETALKGE---DKAAIEAKMQELAQVSQKLME 600 (605)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHSS---CHHHHHHHHHHHHHHTHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhCCHHHHHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999976 689999999999999999999
Q ss_pred HHHH
Q psy3918 631 MAYK 634 (668)
Q Consensus 631 r~~~ 634 (668)
++|+
T Consensus 601 ~~~~ 604 (605)
T 4b9q_A 601 IAQQ 604 (605)
T ss_dssp HC--
T ss_pred HHhc
Confidence 9886
No 2
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=100.00 E-value=1.5e-93 Score=816.39 Aligned_cols=537 Identities=60% Similarity=0.913 Sum_probs=507.0
Q ss_pred ceEEEEEcCCceEEEEEEeCCeeeEecCCCCCccccEEEEEecCCcEEEcHHHHHhhhhCCCchhhHhhhhhCCCCCChH
Q psy3918 57 GQVIGIDLGTTNSCVAVMEGKQAKVIENSEGSRTTPSVVAFTKDGERLVGTPARRQAVTNSANTFYATKRLIGRRFDDPE 136 (668)
Q Consensus 57 ~~vvGIDlGTt~s~vA~~~~~~~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~~i~~~KrllG~~~~d~~ 136 (668)
+.+|||||||||||||++.+|.+++|.|..|++++||+|+|+++++++||..|+.++..+|.++++++||+||+.++|+.
T Consensus 2 ~~viGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~t~~~~Kr~iG~~~~d~~ 81 (605)
T 2kho_A 2 GKIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEE 81 (605)
T ss_dssp --CEEEECCSSEEEEEEEETTEEEECCCTTSCSSEECEEEECTTSCEEESHHHHTTTTTCGGGEEECGGGTTTCBSSSTT
T ss_pred CCEEEEEcCCcCEEEEEEECCEEEEEECCCCCcccceEEEEECCCcEEECHHHHHHhhhCCCCEeehhhHhhCCCCCcHH
Confidence 35899999999999999999999999999999999999999877899999999999999999999999999999999999
Q ss_pred HHHhhccCceEEEEcCCCCeeEeCCCCceeChhhHHHHHHHHHHHHHHHhhcCCCCcEEEeeCCCCCHHHHHHHHHHHHH
Q psy3918 137 IKKDMKNLSYKIVRASNGDAWVQGSDEKVYSPSQIGAFVLMKMKETSEAFLNTSVKNAVITVPAYFNDSQRQATKDAGQI 216 (668)
Q Consensus 137 v~~~~~~~p~~~~~~~~~~~~i~~~~~~~~~~~ev~a~iL~~lk~~ae~~l~~~~~~~VITVPa~f~~~qR~a~~~Aa~~ 216 (668)
++.+.+.+||.++...++.+++.. .++.++|+++++++|++|++.|+.++|.++.++|||||+||++.||++|++||++
T Consensus 82 v~~~~~~~p~~~~~~~~g~~~i~~-~g~~~~~~ei~a~~L~~l~~~ae~~l~~~v~~~VitVPa~f~d~qr~a~~~A~~~ 160 (605)
T 2kho_A 82 VQRDVSIMPFKIIAADNGDAWVEV-KGQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRI 160 (605)
T ss_dssp HHHHHHHCSSCEEECTTSBEEEEE-TTEEECHHHHHHHHHHHHHHHHHHHHCSCCCEEEEEECTTCCHHHHHHHHHHHHT
T ss_pred HHHHhhcCCeEEEECCCCceEEEE-CCEEEcHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEECCCCCHHHHHHHHHHHHH
Confidence 999999999999988888888874 6689999999999999999999999999999999999999999999999999999
Q ss_pred cCCC-------------------------------------------C-----CeEEEEeccCCCcccccccCc------
Q psy3918 217 AGLN-------------------------------------------K-----GVFEVKSTNGDTLLGGEGLDI------ 242 (668)
Q Consensus 217 AGl~-------------------------------------------~-----g~~~V~~~~gd~~lGG~~iD~------ 242 (668)
|||+ . |.|+|+++.|+.+|||++||.
T Consensus 161 AGl~v~~li~EP~AAAlay~l~~~~~~~~vlV~DlGGGT~Dvsi~~~~~~~~~g~~~v~a~~gd~~lGG~d~D~~l~~~l 240 (605)
T 2kho_A 161 AGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYL 240 (605)
T ss_dssp TTCEEEEEEEHHHHHHHHTTTTSSSSEEEEEEEEECSSCEEEEEEEEECTTTSCEEEEEEEEEESSCSGGGTHHHHHHHH
T ss_pred cCCceEEEecCHHHHHHHhhhcccCCCCEEEEEECCCCeEEEEEEEEEecCCCCeEEEEEECCCCCccHHHHHHHHHHHH
Confidence 9998 2 567888889999999998763
Q ss_pred ------------cccHHHHHHHHHHHHHHHHHhCCCcceeeecccccccCCCCcceEEEeeHHHHHHHHHHHHHHHHHHH
Q psy3918 243 ------------RKDQMAMQRLKEAAEKAKIELSSSVQTDINLPYLTMDAGGPKHMNLKLTRSKFESLVGDLIKKTVNPC 310 (668)
Q Consensus 243 ------------~~~~~~~~rL~~~aE~~K~~LS~~~~~~i~i~~l~~~~~~~~~~~~~iTr~efe~l~~~l~~~i~~~i 310 (668)
..+++++.+|+.+||++|+.||...++.+.++++..+..|+.++.++|||++|+++|+|+++++..+|
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~L~~~aE~~K~~ls~~~~~~i~l~~~~~~~~G~~~~~~~itr~~fe~l~~~~~~~i~~~i 320 (605)
T 2kho_A 241 VEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIEPL 320 (605)
T ss_dssp HHHHHHHHSCCSTTCHHHHHHHHHHHHHHHHHTTSSSEEEEEEEEEEEETTEEEEEEEEEEHHHHHTTCCSTTGGGTSHH
T ss_pred HHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHcCCCCceEEEecccccCCCCceEEEEEEeHHHHHHHHHHHHHHHHHHH
Confidence 34578889999999999999999999999999877654444577889999999999999999999999
Q ss_pred HHHHHHcCCCCCCCceEEEecCccCcHHHHHHHHHHhCCCCCCCCCchhHHHhhHHHhhhhhcCCCCceEEeeeccceeE
Q psy3918 311 QKALQDADCKNSDIGEVLLVGGMTRMPKVQSTVQEIFGKVPSRAVNPDEAVAIGAAVQGGVLAGDVTDVLLLDVTPLSLG 390 (668)
Q Consensus 311 ~~~L~~a~~~~~~I~~ViLVGGssriP~V~~~l~~~Fg~~~~~~~npdeaVA~GAai~aa~ls~~~~~~~~~d~~~~slg 390 (668)
+++|+++++.+.+|+.|+||||+||+|+|+++|+++||.++...+||++|||+|||++|+.+++.++++++.|++|++||
T Consensus 321 ~~~L~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~fg~~~~~~~npd~aVA~GAa~~a~~l~~~~~~~~l~dv~p~slg 400 (605)
T 2kho_A 321 KVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTGDVKDVLLLDVTPLSLG 400 (605)
T ss_dssp HHHHHTTTCCTTTCSEEEEESGGGGSHHHHHHHHHHHSSCCBCSSCTTTHHHHHHHHHHTTTTTSCCCCCCSBCCCCCEE
T ss_pred HHHHHHcCCChhhCceEEEECCcccChHHHHHHHHhcCCCcCcCCCcchHHHHHHHHHHHHhcCCccCceEEeeeeeecc
Confidence 99999999999999999999999999999999999999988999999999999999999999998889999999999999
Q ss_pred EEEeCCEEEEEeeCCCCCCccceecccccCCccceeeeeccccccccccccceeEEeeecCcccCCCCCcceEEEEEeec
Q psy3918 391 IETLGGVFTRLITRNTTIPTKKSQGGVLAGDVTDVLLLDVTPLSLGIETLGGVFTRLITRNTTIPTKKSQTQVEIKVHQG 470 (668)
Q Consensus 391 i~~~~~~~~~ii~r~~~iP~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~f~~~~~~n~~~p~~~~q~~~~i~i~~g 470 (668)
+++.++.|.++|+||++||+++++. |++ ..|+|+.+.|.+|||
T Consensus 401 i~~~~g~~~~li~r~t~iP~~~~~~----------------------------f~t---------~~d~q~~v~i~v~~g 443 (605)
T 2kho_A 401 IETMGGVMTTLIAKNTTIPTKHSQV----------------------------FST---------AEDNQSAVTIHVLQG 443 (605)
T ss_dssp EEETTTEEEEEECTTBCSSEEEEEE----------------------------ECC---------SSTTCCEEEEEEEES
T ss_pred ccccCCceEEEEecccccCccceEE----------------------------EEe---------cCCCceEEEEEEEec
Confidence 9999999999999999999999887 888 899999999999999
Q ss_pred CccccccCceeeeEEEeCCCCCCCCCCceEEEEEeCCCceEEEEeeecCCCceeEEEEccCCCCCHHHHHHHHHHHHHHH
Q psy3918 471 EREMAADNKLLGQFTLVGIPPAPRGVPQIEVTFDIDANGIVHVSARDKGTGKEQQIVIQSSGGLSKDEIENMVKNAEQYA 550 (668)
Q Consensus 471 e~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~id~~Gil~v~a~~~~t~~~~~~~i~~~~~ls~~ei~~~~~~~~~~~ 550 (668)
++.++.+|..||+|.|.|+||+|+|.++|+|+|++|.||+|+|++.+..||++..++|....+||++||++|++++++|.
T Consensus 444 e~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~id~~gil~v~a~~~~tg~~~~i~i~~~~~ls~~~i~~~~~~~~~~~ 523 (605)
T 2kho_A 444 ERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSGLNEDEIQKMVRDAEANA 523 (605)
T ss_dssp SCSBGGGSEEEEEEEEECCCSCCTTCSCEEEEEEECTTSCEEEEEEETTTCCEEEEEECTTSSCCHHHHHHHHHHHHHSH
T ss_pred cCcccccCcEEeEEEecCCCCCCCCCcEEEEEEEEcCCCceeEEEEEcCCCceeecccccccCCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999888899999999999999999
Q ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH
Q psy3918 551 TEDKVKRDRVEALNQAESIVHDTESKMEEFKAQLPAEECAKLKEQIAELQKLIANKDSVDPEELRKATTTLQQASLKLFE 630 (668)
Q Consensus 551 ~~D~~~~~~~ea~N~lE~~i~~~~~~l~~~~~~~~~~e~~~i~~~l~~~~~wl~~~~~~~~~~~~~~~~~L~~~~~~i~~ 630 (668)
.+|++.+++.+++|+||+|+|++++.|+++..++++++++++.+.++++++||+++ +.++|++++++|++.+.++..
T Consensus 524 ~~d~~~~~~~~~~n~~e~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~l~~~---~~~~~~~~~~~l~~~~~~~~~ 600 (605)
T 2kho_A 524 EADRKFDELVQTRNQGDHLLHSTRKQVEEAGDKLPADDKTAIESALTALETALKGE---DKAAIEAKMQELAQVSQKLME 600 (605)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHTTSS---CHHHHHHHHHHHHTTCHHHHH
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCHHHHHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999965 789999999999999999999
Q ss_pred HHHH
Q psy3918 631 MAYK 634 (668)
Q Consensus 631 r~~~ 634 (668)
|+|+
T Consensus 601 ~~~~ 604 (605)
T 2kho_A 601 IAQQ 604 (605)
T ss_dssp HHC-
T ss_pred HHhc
Confidence 9885
No 3
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=100.00 E-value=1.8e-90 Score=796.77 Aligned_cols=540 Identities=24% Similarity=0.388 Sum_probs=494.2
Q ss_pred ceEEEEEcCCceEEEEEEeCCeeeEecCCCCCccccEEEEEecCCcEEEcHHHHHhhhhCCCchhhHhhhhhCCCCCChH
Q psy3918 57 GQVIGIDLGTTNSCVAVMEGKQAKVIENSEGSRTTPSVVAFTKDGERLVGTPARRQAVTNSANTFYATKRLIGRRFDDPE 136 (668)
Q Consensus 57 ~~vvGIDlGTt~s~vA~~~~~~~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~~i~~~KrllG~~~~d~~ 136 (668)
+.+|||||||||||||++.+|.+++|.|..|++++||+|+|. +++++||..|+.++..+|.++++++||+||+.++|+.
T Consensus 2 m~~iGIDlGTtns~va~~~~g~~~ii~n~~g~r~tPS~Vaf~-~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~~ 80 (675)
T 3d2f_A 2 STPFGLDLGNNNSVLAVARNRGIDIVVNEVSNRSTPSVVGFG-PKNRYLGETGKNKQTSNIKNTVANLKRIIGLDYHHPD 80 (675)
T ss_dssp CCCEEEECCSSEEEEEEEETTEEEEECCTTSCSSEECCEEEC-SSSEEETHHHHHHHTTCGGGEECCHHHHTTCBTTCTT
T ss_pred CcEEEEEcCCCcEEEEEEECCeeEEEECCCCCcccceEEEEC-CCcEEecHHHHHhhhhChHhHHHHHHHHhCCCCCcHH
Confidence 358999999999999999999999999999999999999997 4589999999999999999999999999999999999
Q ss_pred HHHhhccCceEEEEcCCCCeeEeC---CCCceeChhhHHHHHHHHHHHHHHHhhcCCCCcEEEeeCCCCCHHHHHHHHHH
Q psy3918 137 IKKDMKNLSYKIVRASNGDAWVQG---SDEKVYSPSQIGAFVLMKMKETSEAFLNTSVKNAVITVPAYFNDSQRQATKDA 213 (668)
Q Consensus 137 v~~~~~~~p~~~~~~~~~~~~i~~---~~~~~~~~~ev~a~iL~~lk~~ae~~l~~~~~~~VITVPa~f~~~qR~a~~~A 213 (668)
++.+.+++||.+++..+|.+.+.. ...+.++|+++++++|++|++.|+.++|.++.++|||||+||++.||++|++|
T Consensus 81 v~~~~~~~p~~v~~~~~g~~~~~~~~~g~~~~~speei~a~~L~~lk~~ae~~lg~~v~~~VITVPa~f~~~qR~a~~~A 160 (675)
T 3d2f_A 81 FEQESKHFTSKLVELDDKKTGAEVRFAGEKHVFSATQLAAMFIDKVKDTVKQDTKANITDVCIAVPPWYTEEQRYNIADA 160 (675)
T ss_dssp HHHHHTTCCSEEEECTTSBEEEEEEETTEEEEEEHHHHHHHHHHHHHHHHHHHHCSCCCEEEEEECTTCCHHHHHHHHHH
T ss_pred HHHHHhhCCeeEEEcCCCceEEEEEeCCCCceEcHHHHHHHHHHHHHHHHHHHhCCCcceEEEEECCCCCHHHHHHHHHH
Confidence 999999999999998888877653 22467999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCC--------------------------------------------------CCeEEEEeccCCCcccccccC--
Q psy3918 214 GQIAGLN--------------------------------------------------KGVFEVKSTNGDTLLGGEGLD-- 241 (668)
Q Consensus 214 a~~AGl~--------------------------------------------------~g~~~V~~~~gd~~lGG~~iD-- 241 (668)
|++|||+ +|.|+|+++.||.+|||++||
T Consensus 161 a~~AGl~~~~li~EP~AAAlaygl~~~~~~~~~~~~~~vlV~DlGGGT~Dvsv~~~~~g~~~V~a~~gd~~lGG~d~D~~ 240 (675)
T 3d2f_A 161 ARIAGLNPVRIVNDVTAAGVSYGIFKTDLPEGEEKPRIVAFVDIGHSSYTCSIMAFKKGQLKVLGTACDKHFGGRDFDLA 240 (675)
T ss_dssp HHHTTCEEEEEEEHHHHHHHHHHHHCSCCCCSSSCCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHH
T ss_pred HHHcCCceEEEEcchHHHHHHHhhhccccccccCCCcEEEEEEcCCCcEEEEEEEecCCeEEEEEEcCCCCccHHHHHHH
Confidence 9999997 345667888899999999665
Q ss_pred ----------------ccccHHHHHHHHHHHHHHHHHhCCCcceeeecccccccCCCCcceEEEeeHHHHHHHHHHHHHH
Q psy3918 242 ----------------IRKDQMAMQRLKEAAEKAKIELSSSVQTDINLPYLTMDAGGPKHMNLKLTRSKFESLVGDLIKK 305 (668)
Q Consensus 242 ----------------~~~~~~~~~rL~~~aE~~K~~LS~~~~~~i~i~~l~~~~~~~~~~~~~iTr~efe~l~~~l~~~ 305 (668)
+..+++++.+|+.+||++|+.||.+.++.++++++..+ .++.++|||++|+++|.|++++
T Consensus 241 l~~~l~~~f~~~~~~~~~~~~~a~~rL~~~aE~aK~~Ls~~~~~~i~i~~~~~g----~~~~~~itr~~fe~l~~~l~~~ 316 (675)
T 3d2f_A 241 ITEHFADEFKTKYKIDIRENPKAYNRILTAAEKLKKVLSANTNAPFSVESVMND----VDVSSQLSREELEELVKPLLER 316 (675)
T ss_dssp HHHHHHHHHHHHTSCCGGGCHHHHHHHHHHHHHHHHHHHHCSEEEEEETTSSSS----CCEEEEEEHHHHHHHTHHHHTT
T ss_pred HHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHhcCcCCceEEEEeeeccC----ceEEEEEeHHHHHHHHHHHHHH
Confidence 34568899999999999999999998889999887644 5789999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCCCCceEEEecCccCcHHHHHHHHHHhCCCCCCCCCchhHHHhhHHHhhhhhcCC--CCceEEee
Q psy3918 306 TVNPCQKALQDADCKNSDIGEVLLVGGMTRMPKVQSTVQEIFGKVPSRAVNPDEAVAIGAAVQGGVLAGD--VTDVLLLD 383 (668)
Q Consensus 306 i~~~i~~~L~~a~~~~~~I~~ViLVGGssriP~V~~~l~~~Fg~~~~~~~npdeaVA~GAai~aa~ls~~--~~~~~~~d 383 (668)
+..+|+++|+++++++.+|+.|+||||+||+|+|+++|+++||.++...+||++|||+|||++|+.+++. ++++.+.|
T Consensus 317 i~~~i~~~L~~a~l~~~~I~~VvLvGGssriP~v~~~l~~~fg~~~~~~~nPdeaVA~GAa~~a~~ls~~~~v~~~~l~D 396 (675)
T 3d2f_A 317 VTEPVTKALAQAKLSAEEVDFVEIIGGTTRIPTLKQSISEAFGKPLSTTLNQDEAIAKGAAFICAIHSPTLRVRPFKFED 396 (675)
T ss_dssp TTHHHHHHHHHHTCCGGGCCEEEEESGGGGSHHHHHHHHHHHTSCEECCSCTTTHHHHHHHHHHHHTCSSCCCCCCEEEE
T ss_pred HHHHHHHHHHHhCCChhhCcEEEEECCCccChHHHHHHHHhcCCCccccCCcchHHHHHHHHHHHHhCCCCcccceEEEe
Confidence 9999999999999999999999999999999999999999999988899999999999999999999985 67899999
Q ss_pred eccceeEEEEeCCE----EEEEeeCCCCCCccceecccccCCccceeeeeccccccccccccceeEEeeecCcccCCCCC
Q psy3918 384 VTPLSLGIETLGGV----FTRLITRNTTIPTKKSQGGVLAGDVTDVLLLDVTPLSLGIETLGGVFTRLITRNTTIPTKKS 459 (668)
Q Consensus 384 ~~~~slgi~~~~~~----~~~ii~r~~~iP~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~f~~~~~~n~~~p~~~~ 459 (668)
++|++|||++.++. +.+||+||++||++++++ |++ ..++
T Consensus 397 v~p~slgi~~~~~~~~~~~~~li~rnt~iP~~k~~~----------------------------f~~---------~~~~ 439 (675)
T 3d2f_A 397 IHPYSVSYSWDKQVEDEDHMEVFPAGSSFPSTKLIT----------------------------LNR---------TGDF 439 (675)
T ss_dssp EECSCEEEEECCTTCSCSEEEEECTTEEESEEEEEE----------------------------EEE---------SSCE
T ss_pred eeecceEeeecCCCCCcceEEEEcCCCCCCccccee----------------------------eee---------cCCc
Confidence 99999999998774 999999999999999988 887 5443
Q ss_pred cceEEEEEeecCccccc-cCceeeeEEEeCCCCCCCCCC-ceEEEEEeCCCceEEEEee----------ecCCCceeEEE
Q psy3918 460 QTQVEIKVHQGEREMAA-DNKLLGQFTLVGIPPAPRGVP-QIEVTFDIDANGIVHVSAR----------DKGTGKEQQIV 527 (668)
Q Consensus 460 q~~~~i~i~~ge~~~~~-~n~~lg~~~l~~i~~~~~g~~-~i~v~f~id~~Gil~v~a~----------~~~t~~~~~~~ 527 (668)
+ +.+. |+|++.++. +|..||+|.|.|+||+|+|.+ +|+|+|.+|.||+|+|++. ++.+|++..++
T Consensus 440 ~--~~~~-~~ge~~~~~~~n~~lg~f~l~gi~~~~~g~~~~i~v~f~id~~Gil~V~a~~~~~~~~~~~~~~t~~~~~i~ 516 (675)
T 3d2f_A 440 S--MAAS-YTDITQLPPNTPEQIANWEITGVQLPEGQDSVPVKLKLRCDPSGLHTIEEAYTIEDIEAGSDTKTVKKDDLT 516 (675)
T ss_dssp E--EEEE-ESCGGGSCTTCCSEEEEEEEECCCCCSSCSCEEEEEEEEECTTSCEEEEEEEEECC------CCCCEEEECE
T ss_pred e--EEEE-EcCCcccccccCceeeEEEecCcCCCCCCCcceEEEEEEEcCCCcEEEEEEEEeecccccccccCcceeeEE
Confidence 2 3333 779999887 999999999999999999975 8999999999999999995 78899999999
Q ss_pred EccC-CCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHH-HHccCCHHHHHHHHHHHHHHHHHHhc
Q psy3918 528 IQSS-GGLSKDEIENMVKNAEQYATEDKVKRDRVEALNQAESIVHDTESKMEE-FKAQLPAEECAKLKEQIAELQKLIAN 605 (668)
Q Consensus 528 i~~~-~~ls~~ei~~~~~~~~~~~~~D~~~~~~~ea~N~lE~~i~~~~~~l~~-~~~~~~~~e~~~i~~~l~~~~~wl~~ 605 (668)
|... .+||+++|++|++++++|..+|+.++++.+++|+||+|+|++|++|++ +..++++++++++...|+++++||++
T Consensus 517 i~~~~~~ls~~ei~~~~~~~~~~~~~D~~~~~~~~~~n~le~~i~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~wl~~ 596 (675)
T 3d2f_A 517 IVAHTFGLDAKKLNELIEKENEMLAQDKLVAETEDRKNTLEEYIYTLRGKLEEEYAPFASDAEKTKLQGMLNKAEEWLYD 596 (675)
T ss_dssp EEEECSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTGGGSCHHHHHHHHHHHHHHHHHTTT
T ss_pred EecCCCCCCHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHhc
Confidence 9875 489999999999999999999999999999999999999999999975 88999999999999999999999986
Q ss_pred C-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q psy3918 606 K-DSVDPEELRKATTTLQQASLKLFEMAYKKMAAEKE 641 (668)
Q Consensus 606 ~-~~~~~~~~~~~~~~L~~~~~~i~~r~~~~~~~~~~ 641 (668)
+ ..++.++|++++++|++.+.++..|+|+....+.+
T Consensus 597 ~~~~~~~~~~~~~~~~l~~~~~~i~~r~~e~~~rp~~ 633 (675)
T 3d2f_A 597 EGFDSIKAKYIAKYEELASLGNIIRGRYLAKEEEKKQ 633 (675)
T ss_dssp GGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhcChHH
Confidence 4 46789999999999999999999999998765554
No 4
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=100.00 E-value=1.2e-83 Score=728.02 Aligned_cols=481 Identities=54% Similarity=0.832 Sum_probs=446.2
Q ss_pred CCCceEEEEEcCCceEEEEEEeCCeeeEecCCCCCccccEEEEEecCCcEEEcHHHHHhhhhCCCchhhHhhhhhCCCCC
Q psy3918 54 GVKGQVIGIDLGTTNSCVAVMEGKQAKVIENSEGSRTTPSVVAFTKDGERLVGTPARRQAVTNSANTFYATKRLIGRRFD 133 (668)
Q Consensus 54 ~~~~~vvGIDlGTt~s~vA~~~~~~~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~~i~~~KrllG~~~~ 133 (668)
|.++.+|||||||||||||++.+|.+++|.|+.|++++||+|+|++ ++++||..|+.++..+|.++++++|||||+.++
T Consensus 1 M~m~~~iGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~-~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~ 79 (554)
T 1yuw_A 1 MSKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTD-TERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFD 79 (554)
T ss_dssp CCSCCCEEEEECSSEEEEEEECSSSEEECCCTTSCSEEECCEEECS-SCEEETHHHHTTTTTCGGGEECCGGGTTTCCSS
T ss_pred CCCCCEEEEEeCcccEEEEEEECCEEEEEECCCCCeecceEEEEcC-CcEEEcHHHHHhhhhChhhehHhhHHhcCCCCC
Confidence 3456799999999999999999999999999999999999999974 589999999999999999999999999999999
Q ss_pred ChHHHHhhccCceEEEEcCCCCeeEeC---CCCceeChhhHHHHHHHHHHHHHHHhhcCCCCcEEEeeCCCCCHHHHHHH
Q psy3918 134 DPEIKKDMKNLSYKIVRASNGDAWVQG---SDEKVYSPSQIGAFVLMKMKETSEAFLNTSVKNAVITVPAYFNDSQRQAT 210 (668)
Q Consensus 134 d~~v~~~~~~~p~~~~~~~~~~~~i~~---~~~~~~~~~ev~a~iL~~lk~~ae~~l~~~~~~~VITVPa~f~~~qR~a~ 210 (668)
|+.++..++++||.++.. ++.+.+.. ...+.++|+++++++|++|++.|+.++|.++.++|||||++|++.||+++
T Consensus 80 d~~v~~~~~~~p~~v~~~-~g~~~~~v~~~~~~~~~sp~ei~a~~L~~lk~~ae~~lg~~v~~~VitVPa~f~~~qr~a~ 158 (554)
T 1yuw_A 80 DAVVQSDMKHWPFMVVND-AGRPKVQVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQAT 158 (554)
T ss_dssp CSHHHHHHTTCSSEEEEE-TTEEEEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEEEECTTCCHHHHHHH
T ss_pred cHHHHHHhhcCCeEEEec-CCceEEEEEECCCceEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHH
Confidence 999999999999999854 66665542 23478999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCC---------------------------------------------CCeEEEEeccCCCcccccccCc---
Q psy3918 211 KDAGQIAGLN---------------------------------------------KGVFEVKSTNGDTLLGGEGLDI--- 242 (668)
Q Consensus 211 ~~Aa~~AGl~---------------------------------------------~g~~~V~~~~gd~~lGG~~iD~--- 242 (668)
++||++|||+ +|.|+|+++.|+.+|||++||.
T Consensus 159 ~~A~~~AGl~~~~li~EP~AAAlay~~~~~~~~~~~vlV~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG~d~d~~l~ 238 (554)
T 1yuw_A 159 KDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIAAGIFEVKSTAGDTHLGGEDFDNRMV 238 (554)
T ss_dssp HHHHHTTTCEEEEEEEHHHHHHHHTTCSTTCSSCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHH
T ss_pred HHHHHHcCCCeEEEeCcHHHHHHHHHhhccCCCCcEEEEEEcCCCeEEEEEEEEcCCcEEEEEEeCCCCCCHHHHHHHHH
Confidence 9999999998 3567778889999999997763
Q ss_pred ---------------cccHHHHHHHHHHHHHHHHHhCCCcceeeecccccccCCCCcceEEEeeHHHHHHHHHHHHHHHH
Q psy3918 243 ---------------RKDQMAMQRLKEAAEKAKIELSSSVQTDINLPYLTMDAGGPKHMNLKLTRSKFESLVGDLIKKTV 307 (668)
Q Consensus 243 ---------------~~~~~~~~rL~~~aE~~K~~LS~~~~~~i~i~~l~~~~~~~~~~~~~iTr~efe~l~~~l~~~i~ 307 (668)
..+++++.+|+.+||++|+.||...++.+.++.+..+ .++.+.|||++|+++++|+++++.
T Consensus 239 ~~l~~~~~~~~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~~~~i~i~~~~~g----~~~~~~ltr~~~e~l~~~~~~~i~ 314 (554)
T 1yuw_A 239 NHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEG----IDFYTSITRARFEELNADLFRGTL 314 (554)
T ss_dssp HHHHHHHHHHTSCCTTSCHHHHHHHHHHHHHHHHHHTTSSEEEEEETTCSSS----CCEEEEEEHHHHHHHTHHHHHHTT
T ss_pred HHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHhhhcccCceEEEEEeeccCC----ceEEEEEEHHHHHHHHHHHHHHHH
Confidence 3467888999999999999999999999999877544 578899999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCCceEEEecCccCcHHHHHHHHHHhC-CCCCCCCCchhHHHhhHHHhhhhhcCC----CCceEEe
Q psy3918 308 NPCQKALQDADCKNSDIGEVLLVGGMTRMPKVQSTVQEIFG-KVPSRAVNPDEAVAIGAAVQGGVLAGD----VTDVLLL 382 (668)
Q Consensus 308 ~~i~~~L~~a~~~~~~I~~ViLVGGssriP~V~~~l~~~Fg-~~~~~~~npdeaVA~GAai~aa~ls~~----~~~~~~~ 382 (668)
.+|+++|+++++.+.+|+.|+||||+||+|+|+++|++.|+ .++....||++|||+|||++|+.+++. ++++++.
T Consensus 315 ~~i~~~L~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~f~~~~v~~~~np~~aVA~Gaa~~a~~l~~~~~~~~~~~~~~ 394 (554)
T 1yuw_A 315 DPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLL 394 (554)
T ss_dssp HHHHHHHHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHHHHTTSCCCCCTTSSCCC
T ss_pred HHHHHHHHHcCCChhhCcEEEEECCcccChHHHHHHHHHcCCCccccCCCchhHHHHHHHHHHHHhcCCccccccceEEE
Confidence 99999999999999999999999999999999999999996 677889999999999999999999874 5789999
Q ss_pred eeccceeEEEEeCCEEEEEeeCCCCCCccceecccccCCccceeeeeccccccccccccceeEEeeecCcccCCCCCcce
Q psy3918 383 DVTPLSLGIETLGGVFTRLITRNTTIPTKKSQGGVLAGDVTDVLLLDVTPLSLGIETLGGVFTRLITRNTTIPTKKSQTQ 462 (668)
Q Consensus 383 d~~~~slgi~~~~~~~~~ii~r~~~iP~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~f~~~~~~n~~~p~~~~q~~ 462 (668)
|++|++||+++.++.|.++|+||++||+++++. |++ ..|+|+.
T Consensus 395 dv~p~slgi~~~~g~~~~li~r~t~iP~~~~~~----------------------------f~~---------~~d~q~~ 437 (554)
T 1yuw_A 395 DVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQT----------------------------FTT---------YSDNQPG 437 (554)
T ss_dssp CBCSSCEEEEETTTEEEEEECTTCBSSEEEEEE----------------------------EEE---------SSTTCSE
T ss_pred EeeeeEEEEEecCceEEEEEECCCccCceeEEE----------------------------eee---------ccCCCce
Confidence 999999999999999999999999999999887 998 8999999
Q ss_pred EEEEEeecCccccccCceeeeEEEeCCCCCCCCCCceEEEEEeCCCceEEEEeeecCCCceeEEEEccC-CCCCHHHHHH
Q psy3918 463 VEIKVHQGEREMAADNKLLGQFTLVGIPPAPRGVPQIEVTFDIDANGIVHVSARDKGTGKEQQIVIQSS-GGLSKDEIEN 541 (668)
Q Consensus 463 ~~i~i~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~id~~Gil~v~a~~~~t~~~~~~~i~~~-~~ls~~ei~~ 541 (668)
+.|.||||++..+.+|..||+|.|.|+||+|+|.++|+|+|++|.||+|+|++.++.+|++..++|..+ ++||++||++
T Consensus 438 v~i~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~id~~gil~v~a~~~~tg~~~~~~i~~~~~~ls~~~i~~ 517 (554)
T 1yuw_A 438 VLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIER 517 (554)
T ss_dssp EEEEEEESSSSBGGGSEEEEEEEEECCCCCSTTCCCEEEEEEECTTCCEEEEEEETTTCCEEEEEECCCSSCSCHHHHHH
T ss_pred EEEEEEecCccccccCcEEEEEEEeCCCCCcccccEEEEEEEEccCceEEEEEEeccCCCceeEEEecCCCCCCHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999877 5699999999
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy3918 542 MVKNAEQYATEDKVKRDRVEALNQAESIVHDTESKM 577 (668)
Q Consensus 542 ~~~~~~~~~~~D~~~~~~~ea~N~lE~~i~~~~~~l 577 (668)
|++++++|+.+|++.+++.+++|+||+|+|++|++|
T Consensus 518 ~~~~~~~~~~~d~~~~~~~~~~n~~e~~~~~~~~~l 553 (554)
T 1yuw_A 518 MVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATV 553 (554)
T ss_dssp HHHHHHHTTTHHHHHTTSSCSCEECSSCCSCSCCCC
T ss_pred HHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999887654
No 5
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=100.00 E-value=1.8e-76 Score=664.08 Aligned_cols=447 Identities=61% Similarity=0.942 Sum_probs=411.2
Q ss_pred ceEEEEEcCCceEEEEEEeCCeeeEecCCCCCccccEEEEEecCCcEEEcHHHHHhhhhCCCchhhHhhhhhCCCCCChH
Q psy3918 57 GQVIGIDLGTTNSCVAVMEGKQAKVIENSEGSRTTPSVVAFTKDGERLVGTPARRQAVTNSANTFYATKRLIGRRFDDPE 136 (668)
Q Consensus 57 ~~vvGIDlGTt~s~vA~~~~~~~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~~i~~~KrllG~~~~d~~ 136 (668)
+.+||||||||||+||++.++.|++++|..|++++||+|+|. +++++||..|+.+...+| ++++++||+||+++.
T Consensus 2 ~~~iGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~-~~~~~vG~~A~~~~~~~p-~~~~~~Kr~lg~p~~--- 76 (509)
T 2v7y_A 2 SKIIGIDLGTTNSCVAVLEGGEVKVIPNPEGNRTTPSVVAFK-NGERLVGEVAKRQAITNP-NTIISIKRHMGTDYK--- 76 (509)
T ss_dssp CCEEEEEECSSEEEEEEEETTEEEECCCTTSCSSEECEEEES-SSSEEESHHHHTTTTTCS-SEEECGGGTTTSCCC---
T ss_pred CCEEEEEcCCceEEEEEEECCEEEEEECCCCCcccceEEEEC-CCcEEECHHHHHhHHhCC-CcHHHHHHhcCCCcE---
Confidence 358999999999999999999999999999999999999994 778999999999999999 999999999998542
Q ss_pred HHHhhccCceEEEEcCCCCeeEeCCCCceeChhhHHHHHHHHHHHHHHHhhcCCCCcEEEeeCCCCCHHHHHHHHHHHHH
Q psy3918 137 IKKDMKNLSYKIVRASNGDAWVQGSDEKVYSPSQIGAFVLMKMKETSEAFLNTSVKNAVITVPAYFNDSQRQATKDAGQI 216 (668)
Q Consensus 137 v~~~~~~~p~~~~~~~~~~~~i~~~~~~~~~~~ev~a~iL~~lk~~ae~~l~~~~~~~VITVPa~f~~~qR~a~~~Aa~~ 216 (668)
+ . .++..++|+++++++|++|++.|+.+++.++..+|||||+||++.||++|++|+++
T Consensus 77 -----------~----------~-~~g~~~~~~ei~a~~L~~l~~~ae~~l~~~~~~~VitvPa~~~~~qr~a~~~a~~~ 134 (509)
T 2v7y_A 77 -----------V----------E-IEGKQYTPQEISAIILQYLKSYAEDYLGEPVTRAVITVPAYFNDAQRQATKDAGRI 134 (509)
T ss_dssp -----------E----------E-ETTEEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHHHHH
T ss_pred -----------E----------E-ECCEEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 1 1 13457899999999999999999999999999999999999999999999999999
Q ss_pred cCCC-------------------------------------------CCeEEEEeccCCCcccccccCc-----------
Q psy3918 217 AGLN-------------------------------------------KGVFEVKSTNGDTLLGGEGLDI----------- 242 (668)
Q Consensus 217 AGl~-------------------------------------------~g~~~V~~~~gd~~lGG~~iD~----------- 242 (668)
|||+ +|.|+|+++.|+.++||++||.
T Consensus 135 AGl~~~~li~Ep~AAAlay~~~~~~~~~vlV~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG~d~d~~l~~~l~~~~~ 214 (509)
T 2v7y_A 135 AGLEVERIINEPTAAALAYGLDKEEDQTILVYDLGGGTFDVSILELGDGVFEVKATAGDNHLGGDDFDQVIIDYLVNQFK 214 (509)
T ss_dssp TTCEEEEEEEHHHHHHHHTTGGGSCSEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHHHHHH
T ss_pred cCCCeEEEecCHHHHHHHHhhccCCCCEEEEEECCCCeEEEEEEEEcCCeEEEEEecCCCCcCHHHHHHHHHHHHHHHHH
Confidence 9998 3567788888999999997663
Q ss_pred -------cccHHHHHHHHHHHHHHHHHhCCCcceeeecccccccCCCCcceEEEeeHHHHHHHHHHHHHHHHHHHHHHHH
Q psy3918 243 -------RKDQMAMQRLKEAAEKAKIELSSSVQTDINLPYLTMDAGGPKHMNLKLTRSKFESLVGDLIKKTVNPCQKALQ 315 (668)
Q Consensus 243 -------~~~~~~~~rL~~~aE~~K~~LS~~~~~~i~i~~l~~~~~~~~~~~~~iTr~efe~l~~~l~~~i~~~i~~~L~ 315 (668)
..+++++.+|+.+||++|+.||...++.+.++++..+..|+.++.++|||++|+++++|+++++.++|+++|+
T Consensus 215 ~~~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~~~~i~l~~~~~~~~G~~~~~~~itr~~fe~l~~~~~~~i~~~i~~~L~ 294 (509)
T 2v7y_A 215 QEHGIDLSKDKMALQRLKDAAEKAKKELSGVTQTQISLPFISANENGPLHLEMTLTRAKFEELSAHLVERTMGPVRQALQ 294 (509)
T ss_dssp HHHSCCGGGCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEEEETTEEEEEEEEEEHHHHHHHTHHHHHTTHHHHHHHHH
T ss_pred HHhCCCcccCHHHHHHHHHHHHHHHHhcCCCCcEEEEEeccccCCCCCeeEEEEEEHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456788899999999999999999999999987654333356788999999999999999999999999999
Q ss_pred HcCCCCCCCceEEEecCccCcHHHHHHHHHHhCCCCCCCCCchhHHHhhHHHhhhhhcCCCCceEEeeeccceeEEEEeC
Q psy3918 316 DADCKNSDIGEVLLVGGMTRMPKVQSTVQEIFGKVPSRAVNPDEAVAIGAAVQGGVLAGDVTDVLLLDVTPLSLGIETLG 395 (668)
Q Consensus 316 ~a~~~~~~I~~ViLVGGssriP~V~~~l~~~Fg~~~~~~~npdeaVA~GAai~aa~ls~~~~~~~~~d~~~~slgi~~~~ 395 (668)
++++...+|+.|+||||+|++|+|+++|++.||.++....||++|||+|||++|+.+++..+++++.|++|++||+++.+
T Consensus 295 ~a~~~~~~i~~VvLvGG~s~~p~v~~~l~~~f~~~~~~~~~p~~aVa~Gaa~~a~~l~~~~~~~~~~dv~p~slgi~~~~ 374 (509)
T 2v7y_A 295 DAGLTPADIDKVILVGGSTRIPAVQEAIKRELGKEPHKGVNPDEVVAIGAAIQGGVIAGEVKDVVLLDVTPLSLGIETMG 374 (509)
T ss_dssp HHTCCGGGCSEEEEESGGGGCHHHHHHHHHHHSSCCBCCSCTTTHHHHHHHHHHHHHHTCCCCCCCCCBCSSEEEEEETT
T ss_pred HcCCChhHCcEEEEECCcccChHHHHHHHHHhCCCcCcCCCchhhhHhhHHHHHHHhcCCccCceEEEeeccccceeecC
Confidence 99999899999999999999999999999999988889999999999999999999999888999999999999999999
Q ss_pred CEEEEEeeCCCCCCccceecccccCCccceeeeeccccccccccccceeEEeeecCcccCCCCCcceEEEEEeecCcccc
Q psy3918 396 GVFTRLITRNTTIPTKKSQGGVLAGDVTDVLLLDVTPLSLGIETLGGVFTRLITRNTTIPTKKSQTQVEIKVHQGEREMA 475 (668)
Q Consensus 396 ~~~~~ii~r~~~iP~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~f~~~~~~n~~~p~~~~q~~~~i~i~~ge~~~~ 475 (668)
+.|.++|+||+++|+++++. |++ ..|+|+.+.|.+|||++..+
T Consensus 375 ~~~~~li~~~~~iP~~~~~~----------------------------f~~---------~~d~q~~~~i~v~~ge~~~~ 417 (509)
T 2v7y_A 375 GVFTKLIERNTTIPTSKSQV----------------------------FTT---------AADNQTTVDIHVLQGERPMA 417 (509)
T ss_dssp TEEEEEECTTCBSSEEEEEE----------------------------ECC---------SSTTCCEEEEEEEEESSSBG
T ss_pred CceEEEEeCCCcCCcceEEE----------------------------EEe---------eccCcEEEEEEEEecCcccc
Confidence 99999999999999998887 888 88999999999999999999
Q ss_pred ccCceeeeEEEeCCCCCCCCCCceEEEEEeCCCceEEEEeeecCCCceeEEEEccCCCCCHHHHHHHHHHHHHHHHhhHH
Q psy3918 476 ADNKLLGQFTLVGIPPAPRGVPQIEVTFDIDANGIVHVSARDKGTGKEQQIVIQSSGGLSKDEIENMVKNAEQYATEDKV 555 (668)
Q Consensus 476 ~~n~~lg~~~l~~i~~~~~g~~~i~v~f~id~~Gil~v~a~~~~t~~~~~~~i~~~~~ls~~ei~~~~~~~~~~~~~D~~ 555 (668)
.+|..||+|.|.++||.|+|.++|+|+|++|.||+|+|++.+..+|++..++|....+||++||++|++++++|+.+|++
T Consensus 418 ~~~~~lg~~~l~~i~~~~~g~~~i~v~f~id~~gil~v~a~~~~~g~~~~~~i~~~~~l~~~~i~~~~~~~~~~~~~d~~ 497 (509)
T 2v7y_A 418 ADNKSLGRFQLTGIPPAPRGVPQIEVTFDIDANGIVHVRAKDLGTNKEQSITIKSSSGLSEEEIQRMIKEAEENAEADRK 497 (509)
T ss_dssp GGSEEEEEEEEECCCCCCTTCSCEEEEEEECTTSCEEEEEEETTTCCEEEEEECSSCSCCSHHHHHHHHHHHHSCGGGGG
T ss_pred ccCcEEEEEEEeCCCCCCCcccEEEEEEEEcCCceEEEEEEEcCCCcEEEEEEEecCCCCHHHHHHHHHHHHHhhhccHH
Confidence 99999999999999999999999999999999999999999999999999999988889999999999999999999999
Q ss_pred HHHHHHHHHHHH
Q psy3918 556 KRDRVEALNQAE 567 (668)
Q Consensus 556 ~~~~~ea~N~lE 567 (668)
.+++.+++|+||
T Consensus 498 ~~~~~~~~~~~e 509 (509)
T 2v7y_A 498 RKEAAELRNEAD 509 (509)
T ss_dssp GGGCCCC-----
T ss_pred HHHHHHHHhhcC
Confidence 999999999986
No 6
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=100.00 E-value=9e-51 Score=443.65 Aligned_cols=313 Identities=50% Similarity=0.782 Sum_probs=282.9
Q ss_pred CceEEEEEcCCceEEEEEEeCCeeeEecCCCCCccccEEEEEecCCcEEEcHHHHHhhhhCCCchhhHhhhhhCCCCCCh
Q psy3918 56 KGQVIGIDLGTTNSCVAVMEGKQAKVIENSEGSRTTPSVVAFTKDGERLVGTPARRQAVTNSANTFYATKRLIGRRFDDP 135 (668)
Q Consensus 56 ~~~vvGIDlGTt~s~vA~~~~~~~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~~i~~~KrllG~~~~d~ 135 (668)
.+.+||||||||||+||++.++.++++.|..|++++||+|+|.+ ++++||..|+.++.++|.++++++||+||+.++++
T Consensus 22 ~~~viGID~GTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~-~~~~vG~~A~~~~~~~~~~~~~~~Kr~lg~~~~~~ 100 (404)
T 3i33_A 22 SMPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTD-TERLIGDAAKNQVAMNPTNTIFDAKRLIGRKFEDA 100 (404)
T ss_dssp -CCCEEEEECSSEEEEEEEETTEEEECCCTTSCSSEECCEEECS-SCEEETHHHHHTTTTCSTTEECCGGGTTTCCTTSH
T ss_pred cCCEEEEEcCCccEEEEEEECCeeEEEECCCCCcccceEEEECC-CCEEecHHHHHhhHhChhhhHHHHHHHhCCCCCcH
Confidence 45799999999999999999999999999999999999999974 48999999999999999999999999999999999
Q ss_pred HHHHhhccCceEEEEcCCCCeeEeC-CC--CceeChhhHHHHHHHHHHHHHHHhhcCCCCcEEEeeCCCCCHHHHHHHHH
Q psy3918 136 EIKKDMKNLSYKIVRASNGDAWVQG-SD--EKVYSPSQIGAFVLMKMKETSEAFLNTSVKNAVITVPAYFNDSQRQATKD 212 (668)
Q Consensus 136 ~v~~~~~~~p~~~~~~~~~~~~i~~-~~--~~~~~~~ev~a~iL~~lk~~ae~~l~~~~~~~VITVPa~f~~~qR~a~~~ 212 (668)
.++.+.+.+||.+.. .++...+.. .. ...++|+++++++|++|++.++.+++.++.++|||||++|++.||+++++
T Consensus 101 ~~~~~~~~~p~~~~~-~~g~~~~~v~~~~~~~~~~~~ei~a~~L~~l~~~a~~~~~~~~~~~vitvPa~~~~~~r~~~~~ 179 (404)
T 3i33_A 101 TVQSDMKHWPFRVVS-EGGKPKVQVEYKGETKTFFPEEISSMVLTKMKEIAEAYLGGKVHSAVITVPAYFNDSQRQATKD 179 (404)
T ss_dssp HHHHHHTTCSSEEEE-ETTEEEEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEEEECTTCCHHHHHHHHH
T ss_pred HHHHHHhhCCceEEc-cCCceEEEEEeCCCceEEcHHHHHHHHHHHHHHHHHHHhccCCCcEEEEECCCCCHHHHHHHHH
Confidence 999999999999986 455554432 22 37899999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCC-----------------------------------------------CCeEEEEeccCCCcccccccCc---
Q psy3918 213 AGQIAGLN-----------------------------------------------KGVFEVKSTNGDTLLGGEGLDI--- 242 (668)
Q Consensus 213 Aa~~AGl~-----------------------------------------------~g~~~V~~~~gd~~lGG~~iD~--- 242 (668)
||+.|||+ ++.|+++++.|+..+||.+||.
T Consensus 180 a~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~~vlV~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l~ 259 (404)
T 3i33_A 180 AGTITGLNVLRIINEPTAAAIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMV 259 (404)
T ss_dssp HHHHHTCEEEEEEEHHHHHHHHTTTTSSCSSSSCCEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHH
T ss_pred HHHHcCCCeEEEeccHHHHHHHHHhhcccccCCCceEEEEECCCCcEEEEEEEEeCCeEEEEEEeCCCCCCHHHHHHHHH
Confidence 99999997 3345566778888999997763
Q ss_pred ---------------cccHHHHHHHHHHHHHHHHHhCCCcceeeecccccccCCCCcceEEEeeHHHHHHHHHHHHHHHH
Q psy3918 243 ---------------RKDQMAMQRLKEAAEKAKIELSSSVQTDINLPYLTMDAGGPKHMNLKLTRSKFESLVGDLIKKTV 307 (668)
Q Consensus 243 ---------------~~~~~~~~rL~~~aE~~K~~LS~~~~~~i~i~~l~~~~~~~~~~~~~iTr~efe~l~~~l~~~i~ 307 (668)
..+++.+.+|+.+||++|+.||....+.+.++.+..+ .++.+.|||++|+++++|+++++.
T Consensus 260 ~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~~~~~~~~~g----~~~~~~i~r~~~~~~~~~~~~~i~ 335 (404)
T 3i33_A 260 SHLAEEFKRKHKKDIGPNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEG----VDFYTSITRARFEELNADLFRGTL 335 (404)
T ss_dssp HHHHHHHHHHHSCCCTTCHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEETT----EEEEEEEEHHHHHHHTHHHHHHTH
T ss_pred HHHHHHHHHHhCCCcCCCHHHHHHHHHHHHHHHHhCCcCcceEEEEeeccCC----ceeEEEEcHHHHHHHHHHHHHHHH
Confidence 3457788899999999999999999999988877654 678899999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCCceEEEecCccCcHHHHHHHHHHh-CCCCCCCCCchhHHHhhHHHhhhhhcC
Q psy3918 308 NPCQKALQDADCKNSDIGEVLLVGGMTRMPKVQSTVQEIF-GKVPSRAVNPDEAVAIGAAVQGGVLAG 374 (668)
Q Consensus 308 ~~i~~~L~~a~~~~~~I~~ViLVGGssriP~V~~~l~~~F-g~~~~~~~npdeaVA~GAai~aa~ls~ 374 (668)
++|+++|+.+++...+|+.|+||||+|++|+|+++|++.| +.++....||++|||+|||++|+++++
T Consensus 336 ~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~l~~ 403 (404)
T 3i33_A 336 EPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILIG 403 (404)
T ss_dssp HHHHHHHHHHTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCSSCTTTHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHcCCCHhhCCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999999 677888999999999999999999875
No 7
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=100.00 E-value=1.9e-50 Score=437.92 Aligned_cols=315 Identities=64% Similarity=0.979 Sum_probs=284.1
Q ss_pred eEEEEEcCCceEEEEEEeCCeeeEecCCCCCccccEEEEEecCCcEEEcHHHHHhhhhCCCchhhHhhhhhCCCCCChHH
Q psy3918 58 QVIGIDLGTTNSCVAVMEGKQAKVIENSEGSRTTPSVVAFTKDGERLVGTPARRQAVTNSANTFYATKRLIGRRFDDPEI 137 (668)
Q Consensus 58 ~vvGIDlGTt~s~vA~~~~~~~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~~i~~~KrllG~~~~d~~v 137 (668)
.+||||||||||+||++.+|.++++.|..|++++||+|+|+++++++||..|+.+..++|+++++++||+||+.++++.+
T Consensus 3 ~~vGIDlGTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~~ 82 (383)
T 1dkg_D 3 KIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEV 82 (383)
T ss_dssp CCCEEECCSSEEEEEEEETTEEEECCCTTSCSEEECEEEECTTSCEEESHHHHTTSTTCGGGEEECGGGTTTCBSCSHHH
T ss_pred cEEEEEcCCCCEEEEEEECCeeEEEECCCCCcccceEEEEECCCCEEECHHHHHhhhhCccceeehhHHhhCCCCCcHHH
Confidence 58999999999999999999999999999999999999998778899999999999999999999999999999999999
Q ss_pred HHhhccCceEEEEcCCCCeeEeCCCCceeChhhHHHHHHHHHHHHHHHhhcCCCCcEEEeeCCCCCHHHHHHHHHHHHHc
Q psy3918 138 KKDMKNLSYKIVRASNGDAWVQGSDEKVYSPSQIGAFVLMKMKETSEAFLNTSVKNAVITVPAYFNDSQRQATKDAGQIA 217 (668)
Q Consensus 138 ~~~~~~~p~~~~~~~~~~~~i~~~~~~~~~~~ev~a~iL~~lk~~ae~~l~~~~~~~VITVPa~f~~~qR~a~~~Aa~~A 217 (668)
+...+.+||.++...++...+.. .++.++|+++++++|++|++.|+.+++.++.++|||||++|++.||+++++|++.|
T Consensus 83 ~~~~~~~p~~~~~~~~~~~~~~~-~g~~~~~~~i~~~~L~~l~~~a~~~~~~~~~~~vitvP~~~~~~~r~~~~~a~~~a 161 (383)
T 1dkg_D 83 QRDVSIMPFKIIAADNGDAWVEV-KGQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIA 161 (383)
T ss_dssp HHHTTTCSSEEEECSSSBEEEEE-TTEEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEECBCTTCCHHHHHHHHHHHHHT
T ss_pred HHHhhcCCeEEEEcCCCcEEEEE-CCEEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHHHHc
Confidence 99999999999888888877773 66789999999999999999999999999999999999999999999999999999
Q ss_pred CCC--------------------------------C----------------CeEEEEeccCCCcccccccCc-------
Q psy3918 218 GLN--------------------------------K----------------GVFEVKSTNGDTLLGGEGLDI------- 242 (668)
Q Consensus 218 Gl~--------------------------------~----------------g~~~V~~~~gd~~lGG~~iD~------- 242 (668)
||+ + +.++++++.|+..+||+++|.
T Consensus 162 Gl~~~~li~Ep~Aaa~~~~~~~~~~~~~~lVvD~Gggttdvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~id~~l~~~l~ 241 (383)
T 1dkg_D 162 GLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLV 241 (383)
T ss_dssp TCEESCCCBHHHHHHHHHTCCC-CCEEEEEEEEECSSCEEEEEEEEEC----CCCEEEEEEEESSCSHHHHHHHHHHHHH
T ss_pred CCceEEEeccHHHHHHHHHhccCCCCcEEEEEEcCCCeEEEEEEEEEecCCCCeEEEEEEeCCCCCCHHHHHHHHHHHHH
Confidence 997 2 234455556778899997763
Q ss_pred -----------cccHHHHHHHHHHHHHHHHHhCCCcceeeecccccccCCCCcceEEEeeHHHHHHHHHHHHHHHHHHHH
Q psy3918 243 -----------RKDQMAMQRLKEAAEKAKIELSSSVQTDINLPYLTMDAGGPKHMNLKLTRSKFESLVGDLIKKTVNPCQ 311 (668)
Q Consensus 243 -----------~~~~~~~~rL~~~aE~~K~~LS~~~~~~i~i~~l~~~~~~~~~~~~~iTr~efe~l~~~l~~~i~~~i~ 311 (668)
..+++.+.+|+.+||++|+.||......+.++.+..+.+|+.++.++|||++|+++++|+++++.++|+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~i~i~~~~~~~~G~~~~~~~it~~~~~~~~~~~~~~i~~~i~ 321 (383)
T 1dkg_D 242 EEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIELLK 321 (383)
T ss_dssp HHHHHHHCCCSTTCHHHHHHHHHHHHHHHHHTTSSSEEEEEEEEEEEETTEEEEEEEEEEHHHHHHHSHHHHHHHHHHHH
T ss_pred HHHHHHhCCCcccCHHHHHHHHHHHHHHHHHhCCCCceEEEEecccccCCCCeeEEEEEeHHHHHHHHHHHHHHHHHHHH
Confidence 234577788999999999999998888888887654332334667899999999999999999999999
Q ss_pred HHHHHcCCCCCCCceEEEecCccCcHHHHHHHHHHhCCCCCCCCCchhHHHhhHHHhhhhhc
Q psy3918 312 KALQDADCKNSDIGEVLLVGGMTRMPKVQSTVQEIFGKVPSRAVNPDEAVAIGAAVQGGVLA 373 (668)
Q Consensus 312 ~~L~~a~~~~~~I~~ViLVGGssriP~V~~~l~~~Fg~~~~~~~npdeaVA~GAai~aa~ls 373 (668)
++|+++++...+|+.|+|+||+|++|+|+++|++.|+.++....||++|||+|||++|++|+
T Consensus 322 ~~l~~~~~~~~~i~~IvL~GG~s~~p~l~~~l~~~~~~~v~~~~~p~~ava~Gaa~~a~~l~ 383 (383)
T 1dkg_D 322 VALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLT 383 (383)
T ss_dssp HHHHTTTCCTTTCCEEEEESGGGGSHHHHHHHHHHHSSCCBCSSCTTTHHHHHHHHHTTTTC
T ss_pred HHHHHcCCCHhhCCEEEEecCccccHHHHHHHHHHhCCCCCCCcChHHHHHHHHHHHHHhhC
Confidence 99999999888999999999999999999999999998888899999999999999998764
No 8
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=100.00 E-value=2.8e-50 Score=438.11 Aligned_cols=312 Identities=51% Similarity=0.804 Sum_probs=283.6
Q ss_pred CceEEEEEcCCceEEEEEEeCCeeeEecCCCCCccccEEEEEecCCcEEEcHHHHHhhhhCCCchhhHhhhhhCCCCCCh
Q psy3918 56 KGQVIGIDLGTTNSCVAVMEGKQAKVIENSEGSRTTPSVVAFTKDGERLVGTPARRQAVTNSANTFYATKRLIGRRFDDP 135 (668)
Q Consensus 56 ~~~vvGIDlGTt~s~vA~~~~~~~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~~i~~~KrllG~~~~d~ 135 (668)
+..+||||||||||+||++.++.++++.|..|++++||+|+|.+ ++++||..|+.++..+|.++++++||+||++++++
T Consensus 17 ~~~viGID~GTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~-~~~~vG~~A~~~~~~~~~~~~~~~k~~lg~~~~~~ 95 (394)
T 3qfu_A 17 YGTVIGIDLGTTYSCVAVMKNGKTEILANEQGNRITPSYVAFTD-DERLIGDAAKNQVAANPQNTIFDIKRLIGLKYNDR 95 (394)
T ss_dssp CCSCEEEEECSSEEEEEEECSSCEEECCCTTSCSSEECCEEECS-SCEEESHHHHHTGGGCGGGEECCGGGTTTCCTTCH
T ss_pred CCCEEEEEeCcCcEEEEEEECCeeEEEECCCCCEeeceEEEEeC-CcEEecHHHHHhhHhCcccCHHHHHHHhCCCCCcH
Confidence 35789999999999999999999999999999999999999974 58999999999999999999999999999999999
Q ss_pred HHHHhhccCceEEEEcCCCCeeEeC---CCCceeChhhHHHHHHHHHHHHHHHhhcCCCCcEEEeeCCCCCHHHHHHHHH
Q psy3918 136 EIKKDMKNLSYKIVRASNGDAWVQG---SDEKVYSPSQIGAFVLMKMKETSEAFLNTSVKNAVITVPAYFNDSQRQATKD 212 (668)
Q Consensus 136 ~v~~~~~~~p~~~~~~~~~~~~i~~---~~~~~~~~~ev~a~iL~~lk~~ae~~l~~~~~~~VITVPa~f~~~qR~a~~~ 212 (668)
.++.+.+.+||.++ ..++.+.+.. .....++|+++++++|++|++.++.+++.++.++|||||++|++.||+++++
T Consensus 96 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ei~a~~l~~l~~~a~~~~~~~~~~~vitvP~~~~~~~r~~~~~ 174 (394)
T 3qfu_A 96 SVQKDIKHLPFNVV-NKDGKPAVEVSVKGEKKVFTPEEISGMILGKMKQIAEDYLGTKVTHAVVTVPAYFNDAQRQATKD 174 (394)
T ss_dssp HHHHHHTTCSSEEE-EETTEEEEEEESSSSEEEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHH
T ss_pred HHHHHhhcCCeEEE-cCCCceEEEEEeCCCceEEcHHHHHHHHHHHHHHHHHHhcCCCcceEEEEECCCCCHHHHHHHHH
Confidence 99999999999998 4556555442 2346899999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCC--------------------------------------------CCeEEEEeccCCCcccccccCc------
Q psy3918 213 AGQIAGLN--------------------------------------------KGVFEVKSTNGDTLLGGEGLDI------ 242 (668)
Q Consensus 213 Aa~~AGl~--------------------------------------------~g~~~V~~~~gd~~lGG~~iD~------ 242 (668)
|++.|||+ .+.|+++++.|+..+||.+||.
T Consensus 175 a~~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~vlV~D~Gggt~dvsv~~~~~~~~~~~~~~~~~~lGG~~~d~~l~~~l 254 (394)
T 3qfu_A 175 AGTIAGLNVLRIVNEPTAAAIAYGLDKSDKEHQIIVYDLGGGTFDVSLLSIENGVFEVQATSGDTHLGGEDFDYKIVRQL 254 (394)
T ss_dssp HHHHTTCEEEEEEEHHHHHHHHTTTTSCSSCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHH
T ss_pred HHHHcCCceEEEecCHHHHHHHHhhccCCCCceEEEEEcCCCceeEEEEEEeCCEEEEEEEcCCCCCChHHHHHHHHHHH
Confidence 99999998 3455667778889999998873
Q ss_pred ------------cccHHHHHHHHHHHHHHHHHhCCCcceeeecccccccCCCCcceEEEeeHHHHHHHHHHHHHHHHHHH
Q psy3918 243 ------------RKDQMAMQRLKEAAEKAKIELSSSVQTDINLPYLTMDAGGPKHMNLKLTRSKFESLVGDLIKKTVNPC 310 (668)
Q Consensus 243 ------------~~~~~~~~rL~~~aE~~K~~LS~~~~~~i~i~~l~~~~~~~~~~~~~iTr~efe~l~~~l~~~i~~~i 310 (668)
..+++.+.+|+.+||++|+.||....+.+.++.+..+ .++.+.|||++|+++++|+++++.++|
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~~~~~~~~~~----~~~~~~i~r~~~~~~~~~~~~~i~~~i 330 (394)
T 3qfu_A 255 IKAFKKKHGIDVSDNNKALAKLKREAEKAKRALSSQMSTRIEIDSFVDG----IDLSETLTRAKFEELNLDLFKKTLKPV 330 (394)
T ss_dssp HHHHHHHHSCCCTTCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEETT----EEEEEEEEHHHHHHHHHHHHHHTHHHH
T ss_pred HHHHHHHcCCCCCcCHHHHHHHHHHHHHHHHHcccCCcEEEEEEeccCC----ceeEEEEEHHHHHHHHHHHHHHHHHHH
Confidence 3456778899999999999999999999988877644 578899999999999999999999999
Q ss_pred HHHHHHcCCCCCCCceEEEecCccCcHHHHHHHHHHh-CCCCCCCCCchhHHHhhHHHhhhhhc
Q psy3918 311 QKALQDADCKNSDIGEVLLVGGMTRMPKVQSTVQEIF-GKVPSRAVNPDEAVAIGAAVQGGVLA 373 (668)
Q Consensus 311 ~~~L~~a~~~~~~I~~ViLVGGssriP~V~~~l~~~F-g~~~~~~~npdeaVA~GAai~aa~ls 373 (668)
+++|+.+++...+|+.|+|+||+|++|+|+++|++.| +.++....||++|||+|||++|++++
T Consensus 331 ~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~ls 394 (394)
T 3qfu_A 331 EKVLQDSGLEKKDVDDIVLVGGSTRIPKVQQLLESYFDGKKASKGINPDEAVAYGAAVQAGVLS 394 (394)
T ss_dssp HHHHHHHTCCGGGCCEEEEESGGGGSHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHHHHHC
T ss_pred HHHHHHcCCCHHHCCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHHHHHHHHHHHhhC
Confidence 9999999999889999999999999999999999999 77888899999999999999999874
No 9
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=100.00 E-value=4.8e-49 Score=430.69 Aligned_cols=310 Identities=25% Similarity=0.407 Sum_probs=273.8
Q ss_pred ceEEEEEcCCceEEEEEEeCCeeeEecCCCCCccccEEEEEecCCcEEEcHHHHHhhhhCCCchhhHhhhhhCCCCCChH
Q psy3918 57 GQVIGIDLGTTNSCVAVMEGKQAKVIENSEGSRTTPSVVAFTKDGERLVGTPARRQAVTNSANTFYATKRLIGRRFDDPE 136 (668)
Q Consensus 57 ~~vvGIDlGTt~s~vA~~~~~~~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~~i~~~KrllG~~~~d~~ 136 (668)
+.+||||||||||+||++.++.++++.|..|++++||+|+|. ++.++||..|+.++.++|.++++++|++||+.++++.
T Consensus 13 ~~vvGIDlGTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~-~~~~~~G~~A~~~~~~~~~~~i~~~K~llg~~~~~~~ 91 (409)
T 4gni_A 13 RVVIGITFGNSNSSIAHTVDDKAEVIANEDGDRQIPTILSYV-DGDEYYGQQAKNFLVRNPKNTVAYFRDILGQDFKSVD 91 (409)
T ss_dssp CCEEEEEECSSEEEEEEEETTEEEEECCTTSCSSEECEEEEE-TTEEEEHHHHHHHHHHCGGGEEESCGGGTTCCGGGCC
T ss_pred CcEEEEEcCCCeEEEEEEeCCceEEEECCCCCccCceEEEEC-CCcEEEcHHHHHhhHhChHhhHHHHHHHhCCCccchh
Confidence 479999999999999999999999999999999999999997 6689999999999999999999999999999988876
Q ss_pred HHHhhccCceEEEEcCCCCeeEeCC-------CCceeChhhHHHHHHHHHHHHHHHhhcCCCCcEEEeeCCCCCHHHHHH
Q psy3918 137 IKKDMKNLSYKIVRASNGDAWVQGS-------DEKVYSPSQIGAFVLMKMKETSEAFLNTSVKNAVITVPAYFNDSQRQA 209 (668)
Q Consensus 137 v~~~~~~~p~~~~~~~~~~~~i~~~-------~~~~~~~~ev~a~iL~~lk~~ae~~l~~~~~~~VITVPa~f~~~qR~a 209 (668)
++... +++.+. ..+|.+.+... .++.++|+++++++|++|++.|+.+++.++.++|||||++|++.||++
T Consensus 92 ~~~~~--~~~~~~-~~~g~~~~~v~~~~~~~~~~~~~~~~ev~~~~L~~l~~~a~~~~~~~~~~~vitvPa~~~~~~r~~ 168 (409)
T 4gni_A 92 PTHNH--ASAHPQ-EAGDNVVFTIKDKAEEDAEPSTLTVSEIATRYLRRLVGAASEYLGKKVTSAVITIPTNFTEKQKAA 168 (409)
T ss_dssp CGGGT--TSCCCE-EETTEEEEEECCSSCSSCCCEEEEHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHH
T ss_pred hhhhc--ccccee-cCCCcEEEEEecCCCCCCcceEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHH
Confidence 65443 333333 23455554422 346899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCC----------------------------------------------CCeEEEEeccCCCcccccccCc-
Q psy3918 210 TKDAGQIAGLN----------------------------------------------KGVFEVKSTNGDTLLGGEGLDI- 242 (668)
Q Consensus 210 ~~~Aa~~AGl~----------------------------------------------~g~~~V~~~~gd~~lGG~~iD~- 242 (668)
+++||+.|||+ ++.++++++.|+..+||.+||.
T Consensus 169 ~~~a~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~vlv~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~ 248 (409)
T 4gni_A 169 LIAAAAAADLEVLQLISEPAAAVLAYDARPEATISDKIIVVADLGGSRSDVTVLASRSGMYTILATVHDYEYHGIALDKV 248 (409)
T ss_dssp HHHHHHHTTCEEEEEEEHHHHHHHHTTC------CCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEESSSSHHHHHHH
T ss_pred HHHHHHHcCCCeEEEEcCHHHHHHHHhcccccCCCCCEEEEEECCCCceEEEEEEEeCCeEEEEEecCCCCcCHHHHHHH
Confidence 99999999998 3345667777889999996653
Q ss_pred -------------------cccHHHHHHHHHHHHHHHHHhCCCcceeeecccccccCCCCcceEEEeeHHHHHHHHHHHH
Q psy3918 243 -------------------RKDQMAMQRLKEAAEKAKIELSSSVQTDINLPYLTMDAGGPKHMNLKLTRSKFESLVGDLI 303 (668)
Q Consensus 243 -------------------~~~~~~~~rL~~~aE~~K~~LS~~~~~~i~i~~l~~~~~~~~~~~~~iTr~efe~l~~~l~ 303 (668)
..+++.+.+|+.+||++|+.||.+..+.+.++.+..+ .++.++|||++|+++++|++
T Consensus 249 i~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~i~i~~~~~~----~~~~~~itr~~~~~~~~~~~ 324 (409)
T 4gni_A 249 LIDHFSKEFLKKNPGAKDPRENPRSLAKLRLEAESTKRALSRSTNASFSVESLIDG----LDFASTINRLRYETIARTVF 324 (409)
T ss_dssp HHHHHHHHHHHHSTTCCCGGGSHHHHHHHHHHHHHHHHHHHHSSEEEEEEEEEETT----EEEEEEEEHHHHHHHTHHHH
T ss_pred HHHHHHHHHHHHhCCCCCcccCHHHHHHHHHHHHHHHHhCCCCCceEEEeecccCC----cceEEEeeHHHHHHHHHHHH
Confidence 3567788999999999999999999999999887654 67899999999999999999
Q ss_pred HHHHHHHHHHHHHcCCCCCCCceEEEecCccCcHHHHHHHHHHhCCCC--------CCCCCchhHHHhhHHHhhhhhcC
Q psy3918 304 KKTVNPCQKALQDADCKNSDIGEVLLVGGMTRMPKVQSTVQEIFGKVP--------SRAVNPDEAVAIGAAVQGGVLAG 374 (668)
Q Consensus 304 ~~i~~~i~~~L~~a~~~~~~I~~ViLVGGssriP~V~~~l~~~Fg~~~--------~~~~npdeaVA~GAai~aa~ls~ 374 (668)
+++.++|+++|+++++...+|+.|+||||+|++|+|+++|++.||... ...+||++|||+|||++|+....
T Consensus 325 ~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~~~v~~P~~~~~~~~p~~ava~GAa~~~~~~~~ 403 (409)
T 4gni_A 325 EGFNRLVESAVKKAGLDPLDVDEVIMSGGTSNTPRIAANFRYIFPESTRILAPSTDPSALNPSELQARGAALQASLIQE 403 (409)
T ss_dssp HHHHHHHHHHHHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHSCTTSEEESTTTCTTCCCTTTHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEECCccccHHHHHHHHHHcCCccccccccccCCCcCHHHHHHHHHHHHhhhhhh
Confidence 999999999999999998999999999999999999999999998762 57899999999999999997754
No 10
>4e81_A Chaperone protein DNAK; chaperone; 1.90A {Escherichia coli} PDB: 3dpp_A* 3dpq_A* 3qnj_A 3dpo_A 1dkz_A 1dky_A 1dkx_A 1bpr_A 2bpr_A 1dg4_A
Probab=100.00 E-value=5.2e-41 Score=332.10 Aligned_cols=216 Identities=52% Similarity=0.785 Sum_probs=208.5
Q ss_pred eEEeeeccceeEEEEeCCEEEEEeeCCCCCCccceecccccCCccceeeeeccccccccccccceeEEeeecCcccCCCC
Q psy3918 379 VLLLDVTPLSLGIETLGGVFTRLITRNTTIPTKKSQGGVLAGDVTDVLLLDVTPLSLGIETLGGVFTRLITRNTTIPTKK 458 (668)
Q Consensus 379 ~~~~d~~~~slgi~~~~~~~~~ii~r~~~iP~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~f~~~~~~n~~~p~~~ 458 (668)
+++.|++|+||||++.+|.|.+||+||++||+++++. |+| ..|
T Consensus 1 ~~l~DV~p~slGie~~gg~~~~lI~rnt~iP~~k~~~----------------------------f~t---------~~d 43 (219)
T 4e81_A 1 VLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQV----------------------------FST---------AED 43 (219)
T ss_dssp CCCCCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEE----------------------------EEE---------SST
T ss_pred CeEEEecCcEEEEEEeCCEEEEEEeCcCcccEeEEEE----------------------------EEe---------CCC
Confidence 3678999999999999999999999999999999988 999 999
Q ss_pred CcceEEEEEeecCccccccCceeeeEEEeCCCCCCCCCCceEEEEEeCCCceEEEEeeecCCCceeEEEEccCCCCCHHH
Q psy3918 459 SQTQVEIKVHQGEREMAADNKLLGQFTLVGIPPAPRGVPQIEVTFDIDANGIVHVSARDKGTGKEQQIVIQSSGGLSKDE 538 (668)
Q Consensus 459 ~q~~~~i~i~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~id~~Gil~v~a~~~~t~~~~~~~i~~~~~ls~~e 538 (668)
+|+.+.|.||||++.++.+|.+||+|.|.|+||+|+|.++|+|+|++|.||+|+|+|.+++||++..++|....+||++|
T Consensus 44 nQ~~v~I~VyqGe~~~~~dn~~Lg~f~l~gipp~p~G~~~IeVtf~iD~nGiL~V~a~d~~tg~~~~i~I~~~~~Ls~ee 123 (219)
T 4e81_A 44 NQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSGLNEDE 123 (219)
T ss_dssp TCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCSTTCSCEEEEEEECTTCCEEEEEEETTTCCEEEEEECTTCSCCHHH
T ss_pred CCceEEEEEEEcCCcccccCCEEEEEEEeCCCCCCCCCceEEEEEEeCCCCCEeeeeeccccCccceEeeeccccccHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999888899999
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHH
Q psy3918 539 IENMVKNAEQYATEDKVKRDRVEALNQAESIVHDTESKMEEFKAQLPAEECAKLKEQIAELQKLIANKDSVDPEELRKAT 618 (668)
Q Consensus 539 i~~~~~~~~~~~~~D~~~~~~~ea~N~lE~~i~~~~~~l~~~~~~~~~~e~~~i~~~l~~~~~wl~~~~~~~~~~~~~~~ 618 (668)
|++|++++++|+.+|++.+++.+++|.||+|+|.+++.|+++...++++++++|...++++++||+++ +.++|++++
T Consensus 124 I~~m~~~a~~~~~eD~~~r~~~e~kn~le~~i~~~~~~l~~~~~~l~~~~k~~i~~~l~~~~~~L~~~---~~~~i~~~~ 200 (219)
T 4e81_A 124 IQKMVRDAEANAEADRKFEELVQTRNQGDHLLHSTRKQVEEAGDKLPADDKTAIESALTALETALKGE---DKAAIEAKM 200 (219)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHSS---CHHHHHHHH
T ss_pred HHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHHHHHHhcC---CHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999987 689999999
Q ss_pred HHHHHHHHHHHHHHHH
Q psy3918 619 TTLQQASLKLFEMAYK 634 (668)
Q Consensus 619 ~~L~~~~~~i~~r~~~ 634 (668)
++|++.+.++..|+|+
T Consensus 201 ~~L~~~~~~i~~~~~~ 216 (219)
T 4e81_A 201 QELAQVSQKLMEIAQQ 216 (219)
T ss_dssp HHHHHHTHHHHHHC--
T ss_pred HHHHHHHHHHHHHHhc
Confidence 9999999999999987
No 11
>1u00_A HSC66, chaperone protein HSCA; DNAK, HSP70; 1.95A {Escherichia coli} SCOP: a.8.4.1 b.130.1.1
Probab=100.00 E-value=1.3e-37 Score=310.68 Aligned_cols=216 Identities=35% Similarity=0.552 Sum_probs=207.6
Q ss_pred eeeccceeEEEEeCCEEEEEeeCCCCCCccceecccccCCccceeeeeccccccccccccceeEEeeecCcccCCCCCcc
Q psy3918 382 LDVTPLSLGIETLGGVFTRLITRNTTIPTKKSQGGVLAGDVTDVLLLDVTPLSLGIETLGGVFTRLITRNTTIPTKKSQT 461 (668)
Q Consensus 382 ~d~~~~slgi~~~~~~~~~ii~r~~~iP~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~f~~~~~~n~~~p~~~~q~ 461 (668)
.|++|++|||++.+|.|.+||+||++||+++++. |+| ..|+|+
T Consensus 1 ~Dv~p~slGie~~~g~~~~li~rnt~iP~~k~~~----------------------------f~t---------~~d~Q~ 43 (227)
T 1u00_A 1 MDVIPLSLGLETMGGLVEKVIPRNTTIPVARAQD----------------------------FTT---------FKDGQT 43 (227)
T ss_dssp CCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEE----------------------------EEC---------SSTTCC
T ss_pred CCcccceEEEEEeCCEEEEEEeCcCccCceEEEE----------------------------EEe---------cCCCce
Confidence 4899999999999999999999999999999988 998 899999
Q ss_pred eEEEEEeecCccccccCceeeeEEEeCCCCCCCCCCceEEEEEeCCCceEEEEeeecCCCceeEEEEccCCCCCHHHHHH
Q psy3918 462 QVEIKVHQGEREMAADNKLLGQFTLVGIPPAPRGVPQIEVTFDIDANGIVHVSARDKGTGKEQQIVIQSSGGLSKDEIEN 541 (668)
Q Consensus 462 ~~~i~i~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~id~~Gil~v~a~~~~t~~~~~~~i~~~~~ls~~ei~~ 541 (668)
.+.|.||||++.++.+|..||+|.|.|+||+|+|.++|+|+|++|.||+|+|++.+..+|++..++|....+||+++|++
T Consensus 44 ~v~i~v~qGe~~~~~~n~~Lg~f~l~gi~~~p~G~~~I~Vtf~iD~nGiL~V~a~d~~tg~~~~i~i~~~~~Ls~eei~~ 123 (227)
T 1u00_A 44 AMSIHVMQGERELVQDCRSLARFALRGIPALPAGGAHIRVTFQVDADGLLSVTAMEKSTGVEASIQVKPSYGLTDSEIAS 123 (227)
T ss_dssp CEEEEEEECSSSBGGGSEEEEEEEECCCCCCSTTCSCEEEEEEECTTCCEEEEEEETTTCCEEEEEECCCSCCCHHHHHH
T ss_pred EEEEEEEecCCccCCCCCEEEEEEEeCCCCCCCCceEEEEEEEECCCCcEEEEeecccccccceEEEEeccCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999998888899999999
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHH
Q psy3918 542 MVKNAEQYATEDKVKRDRVEALNQAESIVHDTESKMEEFKAQLPAEECAKLKEQIAELQKLIANKDSVDPEELRKATTTL 621 (668)
Q Consensus 542 ~~~~~~~~~~~D~~~~~~~ea~N~lE~~i~~~~~~l~~~~~~~~~~e~~~i~~~l~~~~~wl~~~~~~~~~~~~~~~~~L 621 (668)
|++.+++|..+|+..+++.+++|.||+|||++++.|+++..++++++++++...|+++++||+++ +.++|++++++|
T Consensus 124 ~~~~~~~~~~~D~~~~e~~e~kn~le~~i~~~~~~l~~~~~~~~~~~k~~i~~~l~~~~~wl~~~---d~~~~~~~~~~L 200 (227)
T 1u00_A 124 MIKDSMSYAEQDVKARMLAEQKVEAARVLESLHGALAADAALLSAAERQVIDDAAAHLSEVAQGD---DVDAIEQAIKNV 200 (227)
T ss_dssp HHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHTTSS---CHHHHHHHHHHH
T ss_pred HHHHHHhhhcccHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCHHHHHHHHHHHHHHHHHHhcC---CHHHHHHHHHHH
Confidence 99999999999999999999999999999999999998999999999999999999999999965 689999999999
Q ss_pred HHHHHHHHHHHHHHHH
Q psy3918 622 QQASLKLFEMAYKKMA 637 (668)
Q Consensus 622 ~~~~~~i~~r~~~~~~ 637 (668)
++.+.++..|.|.+..
T Consensus 201 ~~~~~~i~~r~~~~~~ 216 (227)
T 1u00_A 201 DKQTQDFAARRMDQSV 216 (227)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999886654
No 12
>3n8e_A Stress-70 protein, mitochondrial; beta-sandwich, helix, substrate binding domain, structural G consortium, SGC, chaperone; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.9e-33 Score=266.76 Aligned_cols=165 Identities=80% Similarity=1.124 Sum_probs=153.5
Q ss_pred CCceEEeeeccceeEEEEeCCEEEEEeeCCCCCCccceecccccCCccceeeeeccccccccccccceeEEeeecCcccC
Q psy3918 376 VTDVLLLDVTPLSLGIETLGGVFTRLITRNTTIPTKKSQGGVLAGDVTDVLLLDVTPLSLGIETLGGVFTRLITRNTTIP 455 (668)
Q Consensus 376 ~~~~~~~d~~~~slgi~~~~~~~~~ii~r~~~iP~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~f~~~~~~n~~~p 455 (668)
...+.+.|++|+||||++.+|.|.+||+||++||+++++. |+|
T Consensus 17 ~~~f~l~DV~P~slGie~~gg~~~~lI~rnt~iP~~k~~~----------------------------f~T--------- 59 (182)
T 3n8e_A 17 NLYFQSMDVTPLSLGIETLGGVFTKLINRNTTIPTKKSQV----------------------------FST--------- 59 (182)
T ss_dssp -------CBCSSCEEEECTTSBEEEEECTTCBSSEEEEEE----------------------------ECC---------
T ss_pred CCCEEEEEecCCEEEEEEeCCEEEEEEeCCCccCEEEEEE----------------------------EEE---------
Confidence 3467899999999999999999999999999999999988 998
Q ss_pred CCCCcceEEEEEeecCccccccCceeeeEEEeCCCCCCCCCCceEEEEEeCCCceEEEEeeecCCCceeEEEEccCCCCC
Q psy3918 456 TKKSQTQVEIKVHQGEREMAADNKLLGQFTLVGIPPAPRGVPQIEVTFDIDANGIVHVSARDKGTGKEQQIVIQSSGGLS 535 (668)
Q Consensus 456 ~~~~q~~~~i~i~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~id~~Gil~v~a~~~~t~~~~~~~i~~~~~ls 535 (668)
..|+|+.+.|.||||++..+.+|.+||+|.|.|+||+|+|.++|+|+|++|.||+|+|+|.+++||++..++|....+||
T Consensus 60 ~~DnQ~~v~I~VyqGE~~~~~dn~~LG~f~l~gipp~p~G~~~IeVtf~iD~nGiL~VsA~d~~tg~~~~i~I~~~~~Ls 139 (182)
T 3n8e_A 60 AADGQTQVEIKVCQGEREMAGDNKLLGQFTLIGIPPAPRGVPQIEVTFDIDANGIVHVSAKDKGTGREQQIVIQSSGGLS 139 (182)
T ss_dssp SSTTCCCEEEEEEESSCSBGGGSEEEEEEEECCCCCCCTTCSCEEEEEEECTTCCEEEEEEETTTCCEEEEEESCCCCCC
T ss_pred CCCCccEEEEEEEEcCccccccCceEEEEEEcCCCCCCCCCeeEEEEEEEecCCEEEEEEEEcCCCCEeeEEEecCccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999888899
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy3918 536 KDEIENMVKNAEQYATEDKVKRDRVEALNQAESIVHDTESKM 577 (668)
Q Consensus 536 ~~ei~~~~~~~~~~~~~D~~~~~~~ea~N~lE~~i~~~~~~l 577 (668)
++||++|++++++|+++|++.+++.+++|.||+|+|++|++|
T Consensus 140 ~eei~~mi~~a~~~~~eD~~~~~~~e~kn~le~~iy~~~~~l 181 (182)
T 3n8e_A 140 KDDIENMVKNAEKYAEEDRRKKERVEAVNMAEGIIHDTETKM 181 (182)
T ss_dssp HHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHCCSCCC
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999987654
No 13
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=99.97 E-value=5.9e-31 Score=280.68 Aligned_cols=270 Identities=24% Similarity=0.280 Sum_probs=195.6
Q ss_pred eEEEEEcCCceEEEEEEeCCeeeEecCCCCCccccEEEEEecC-Cc-EEEcHHHHHhhhhCCCchhhHhhhhhCCCCCCh
Q psy3918 58 QVIGIDLGTTNSCVAVMEGKQAKVIENSEGSRTTPSVVAFTKD-GE-RLVGTPARRQAVTNSANTFYATKRLIGRRFDDP 135 (668)
Q Consensus 58 ~vvGIDlGTt~s~vA~~~~~~~~ii~n~~g~~~~PS~V~~~~~-~~-~~vG~~A~~~~~~~p~~~i~~~KrllG~~~~d~ 135 (668)
.+||||||||||+|++..++ .++ .+||+|+|.++ ++ .+||.+|+.+..++|.++...
T Consensus 4 ~~igIDlGT~~s~v~~~~~~--~~~-------~~PS~v~~~~~~~~~~~vG~~A~~~~~~~~~~~~~~------------ 62 (344)
T 1jce_A 4 KDIGIDLGTANTLVFLRGKG--IVV-------NEPSVIAIDSTTGEILKVGLEAKNMIGKTPATIKAI------------ 62 (344)
T ss_dssp CEEEEEECSSEEEEEETTTE--EEE-------EEESCEEEETTTCCEEEESHHHHTTTTCCCTTEEEE------------
T ss_pred ceEEEEcCcCcEEEEECCCC--EEE-------eeCcEEEEecCCCcEEEEcHHHHHhcccCCCCeEEE------------
Confidence 58999999999999875433 232 37999999865 44 479999998877777765321
Q ss_pred HHHHhhccCceEEEEcCCCCeeEeCCCCceeChhhHHHHHHHHHHHHHHHhhcCCCCcEEEeeCCCCCHHHHHHHHHHHH
Q psy3918 136 EIKKDMKNLSYKIVRASNGDAWVQGSDEKVYSPSQIGAFVLMKMKETSEAFLNTSVKNAVITVPAYFNDSQRQATKDAGQ 215 (668)
Q Consensus 136 ~v~~~~~~~p~~~~~~~~~~~~i~~~~~~~~~~~ev~a~iL~~lk~~ae~~l~~~~~~~VITVPa~f~~~qR~a~~~Aa~ 215 (668)
+|+. +| .+. ....++++++++|++++.. .+++ ...+|||||++|++.||+++++|++
T Consensus 63 --------~p~~-----~g--~i~----~~~~~~~i~~~~l~~~~~~--~~~~--~~~~vitvP~~~~~~~r~~~~~a~~ 119 (344)
T 1jce_A 63 --------RPMR-----DG--VIA----DYTVALVMLRYFINKAKGG--MNLF--KPRVVIGVPIGITDVERRAILDAGL 119 (344)
T ss_dssp --------CCEE-----TT--EES----SHHHHHHHHHHHHHHHHTS--CCSC--CCEEEEEECTTCCHHHHHHHHHHHH
T ss_pred --------ecCC-----CC--eeC----ChHHHHHHHHHHHHHHhhc--cccC--CCeEEEEECCCCCHHHHHHHHHHHH
Confidence 1221 11 010 0113566666666655442 1233 4789999999999999999999999
Q ss_pred HcCCC-------------------------------CCeEEEEe-------ccCCCcccccccCccccHHHHHHH-----
Q psy3918 216 IAGLN-------------------------------KGVFEVKS-------TNGDTLLGGEGLDIRKDQMAMQRL----- 252 (668)
Q Consensus 216 ~AGl~-------------------------------~g~~~V~~-------~~gd~~lGG~~iD~~~~~~~~~rL----- 252 (668)
.||++ +|++++.- ..++..+||+++|.........++
T Consensus 120 ~aG~~~~~li~ep~Aaa~~~~~~~~~~~~~lVvDiGggttdvsv~~~~~~~~~~~~~lGG~~id~~l~~~l~~~~~~~~~ 199 (344)
T 1jce_A 120 EAGASKVFLIEEPMAAAIGSNLNVEEPSGNMVVDIGGGTTEVAVISLGSIVTWESIRIAGDEMDEAIVQYVRETYRVAIG 199 (344)
T ss_dssp HTTCSEEEEEEHHHHHHHHTTCCTTSSSCEEEEEECSSCEEEEEEETTEEEEEEEESCSHHHHHHHHHHHHHHHHCEECC
T ss_pred HcCCCeEeccCCHHHHHHhcCCCCCCCceEEEEEeCCCeEEEEEEEcCCEEeeCCCCccChhHHHHHHHHHHHHhCcccC
Confidence 99998 33333311 234556899988865444333332
Q ss_pred HHHHHHHHHHhCCCcc------eeeecccccccCCCCcceEEEeeHHHHHHHHHHHHHHHHHHHHHHHHHcCCC--CCCC
Q psy3918 253 KEAAEKAKIELSSSVQ------TDINLPYLTMDAGGPKHMNLKLTRSKFESLVGDLIKKTVNPCQKALQDADCK--NSDI 324 (668)
Q Consensus 253 ~~~aE~~K~~LS~~~~------~~i~i~~l~~~~~~~~~~~~~iTr~efe~l~~~l~~~i~~~i~~~L~~a~~~--~~~I 324 (668)
...||++|+.|+.... ..+.++.. +..++.++.++|||++|+++++|+++++.+.|+++|+.++.. .+.+
T Consensus 200 ~~~ae~~K~~l~~~~~~~~~~~~~~~~~~~--~~~~g~~~~~~i~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~~~~ 277 (344)
T 1jce_A 200 ERTAERVKIEIGNVFPSKENDELETTVSGI--DLSTGLPRKLTLKGGEVREALRSVVVAIVESVRTTLEKTPPELVSDII 277 (344)
T ss_dssp HHHHHHHHHHHCBCSCCHHHHHCEEEEEEE--ETTTTEEEEEEEEHHHHHHHTHHHHHHHHHHHHHHHHTSCHHHHHHHH
T ss_pred HHHHHHHHHHHhccCccccCCcceEEEecc--ccCCCCceeEEEeHHHHHHHHHHHHHHHHHHHHHHHHhCCchhccchh
Confidence 5689999999997643 24444321 111124578999999999999999999999999999987532 2234
Q ss_pred -ceEEEecCccCcHHHHHHHHHHhCCCCCCCCCchhHHHhhHHHhhhhhc
Q psy3918 325 -GEVLLVGGMTRMPKVQSTVQEIFGKVPSRAVNPDEAVAIGAAVQGGVLA 373 (668)
Q Consensus 325 -~~ViLVGGssriP~V~~~l~~~Fg~~~~~~~npdeaVA~GAai~aa~ls 373 (668)
+.|+|+||+|++|.|+++|++.|+.++....||++|||+||+++|..++
T Consensus 278 ~~~IvL~GG~s~~p~l~~~l~~~~~~~v~~~~~p~~ava~Gaa~~a~~~~ 327 (344)
T 1jce_A 278 ERGIFLTGGGSLLRGLDTLLQKETGISVIRSEEPLTAVAKGAGMVLDKVN 327 (344)
T ss_dssp HHCEEEESGGGCSBTHHHHHHHHHSSCEEECSSTTTHHHHHHHHGGGCHH
T ss_pred hCcEEEECccccchHHHHHHHHHHCCCccccCChHHHHHHHHHHHHhChH
Confidence 6999999999999999999999998877788999999999999998654
No 14
>3h0x_A 78 kDa glucose-regulated protein homolog; structural genomics, APC89502.3, peptide binding, chaperone, BIP, PSI-2; 1.92A {Saccharomyces cerevisiae} PDB: 1ckr_A 7hsc_A
Probab=99.97 E-value=1.9e-30 Score=241.98 Aligned_cols=150 Identities=59% Similarity=0.885 Sum_probs=144.7
Q ss_pred EeeeccceeEEEEeCCEEEEEeeCCCCCCccceecccccCCccceeeeeccccccccccccceeEEeeecCcccCCCCCc
Q psy3918 381 LLDVTPLSLGIETLGGVFTRLITRNTTIPTKKSQGGVLAGDVTDVLLLDVTPLSLGIETLGGVFTRLITRNTTIPTKKSQ 460 (668)
Q Consensus 381 ~~d~~~~slgi~~~~~~~~~ii~r~~~iP~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~f~~~~~~n~~~p~~~~q 460 (668)
+.|++|+||||++.+|.|.++|+||++||+++++. |+| ..|+|
T Consensus 2 ~~Dv~p~slGi~~~gg~~~~lI~rnt~iP~~k~~~----------------------------f~t---------~~d~Q 44 (152)
T 3h0x_A 2 NADVNALTLGIETTGGVMTPLIKRNTAIPTKKSQI----------------------------FST---------AVDNQ 44 (152)
T ss_dssp -CCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEE----------------------------ECC---------SSTTC
T ss_pred ccceeccEEEEEEcCCEEEEEEECcCccCEEEEEE----------------------------EEe---------CCCCc
Confidence 57999999999999999999999999999999988 999 99999
Q ss_pred ceEEEEEeecCccccccCceeeeEEEeCCCCCCCCCCceEEEEEeCCCceEEEEeeecCCCceeEEEEccC-CCCCHHHH
Q psy3918 461 TQVEIKVHQGEREMAADNKLLGQFTLVGIPPAPRGVPQIEVTFDIDANGIVHVSARDKGTGKEQQIVIQSS-GGLSKDEI 539 (668)
Q Consensus 461 ~~~~i~i~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~id~~Gil~v~a~~~~t~~~~~~~i~~~-~~ls~~ei 539 (668)
+.+.|.||||++..+.+|.+||+|.|.|+||+|+|.++|+|+|++|.||+|+|+|.+++||++..++|... ++||++||
T Consensus 45 ~~v~i~VyqGe~~~~~dn~~LG~f~l~gipp~p~G~~~I~Vtf~iD~nGiL~V~a~d~~tg~~~~i~I~~~~~~ls~~ei 124 (152)
T 3h0x_A 45 PTVMIKVYEGERAMSKDNNLLGKFELTGIPPAPRGVPQIEVTFALDANGILKVSATDKGTGKSESITITNDKGRLTQEEI 124 (152)
T ss_dssp CCEEEEEEESSCSBGGGSEEEEEEEECCCCCCCTTCSCEEEEEEECTTSEEEEEEEETTTCCEEEEEEECCTTCCCHHHH
T ss_pred ceeeeeEEEcCccccccCcEEEEEEEeCCCCCCCCCceEEEEEEEcCCCEEEEEEEEcCCCcEeEEEEecCCCCCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999877 67999999
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHH
Q psy3918 540 ENMVKNAEQYATEDKVKRDRVEALNQAE 567 (668)
Q Consensus 540 ~~~~~~~~~~~~~D~~~~~~~ea~N~lE 567 (668)
++|++++++|+.+|++.+++.+++|.||
T Consensus 125 ~~~~~~a~~~~~~D~~~~~~~~~~n~le 152 (152)
T 3h0x_A 125 DRMVEEAEKFASEDASIKAKVESRNKLE 152 (152)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHCSCCCC
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHhhcC
Confidence 9999999999999999999999999886
No 15
>3dob_A Heat shock 70 kDa protein F44E5.5; structural genomics, APC90015.11, peptide-binding domain, HS 2, protein structure initiative; 2.39A {Caenorhabditis elegans}
Probab=99.97 E-value=1.3e-30 Score=242.70 Aligned_cols=150 Identities=59% Similarity=0.879 Sum_probs=141.4
Q ss_pred EeeeccceeEEEEeCCEEEEEeeCCCCCCccceecccccCCccceeeeeccccccccccccceeEEeeecCcccCCCCCc
Q psy3918 381 LLDVTPLSLGIETLGGVFTRLITRNTTIPTKKSQGGVLAGDVTDVLLLDVTPLSLGIETLGGVFTRLITRNTTIPTKKSQ 460 (668)
Q Consensus 381 ~~d~~~~slgi~~~~~~~~~ii~r~~~iP~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~f~~~~~~n~~~p~~~~q 460 (668)
+.|++|+||||++.+|.|.++|+||++||+++++. |+| ..|+|
T Consensus 2 ~~Dv~p~slGie~~gg~~~~lI~rnt~iP~~k~~~----------------------------f~t---------~~dnQ 44 (152)
T 3dob_A 2 NADVAPLSLGIETAGGVMTNLIDRNTRIPTKACKT----------------------------FTT---------YADNQ 44 (152)
T ss_dssp --CBCSSCEEEEETTTEEEEEECTTCBSSEEEEEE----------------------------EEE---------SSTTC
T ss_pred ceeeecceEEEEEcCCEEEEEEECcCccCEEEEEE----------------------------EEE---------CCCCc
Confidence 57999999999999999999999999999999988 999 99999
Q ss_pred ceEEEEEeecCccccccCceeeeEEEeCCCCCCCCCCceEEEEEeCCCceEEEEeeecCCCceeEEEEccC-CCCCHHHH
Q psy3918 461 TQVEIKVHQGEREMAADNKLLGQFTLVGIPPAPRGVPQIEVTFDIDANGIVHVSARDKGTGKEQQIVIQSS-GGLSKDEI 539 (668)
Q Consensus 461 ~~~~i~i~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~id~~Gil~v~a~~~~t~~~~~~~i~~~-~~ls~~ei 539 (668)
+.+.|.||||++..+.+|.+||+|.|.|+||+|+|.++|+|+|++|.||+|+|+|.++.||++..++|... +.||++||
T Consensus 45 ~~v~I~VyqGe~~~~~dn~~LG~f~l~gipp~p~G~~~IeVtf~iD~nGiL~Vsa~d~~tg~~~~i~I~~~~~~Ls~~ei 124 (152)
T 3dob_A 45 PGVSIQVYEGERAMTRDNHRLGTFELSGIPPAPRGVPQIEVTFNIDANGILNVSAEDKSTGKSNRITIQNEKGRLTQSDI 124 (152)
T ss_dssp CEEEEEEEESSCSBGGGSEEEEEEEEECCCCCCTTCCCEEEEEEECTTCCEEEEEEETTTCCEEEEEECCC----CHHHH
T ss_pred eEEEEEEEEcCccccccCceeEEEEEeCCCCCCCCCceEEEEEEeCCCCeEEEEEEEcCCCCEEEEEEEcCCCCCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999877 45999999
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHH
Q psy3918 540 ENMVKNAEQYATEDKVKRDRVEALNQAE 567 (668)
Q Consensus 540 ~~~~~~~~~~~~~D~~~~~~~ea~N~lE 567 (668)
++|++++++|+.+|++.+++.+++|.||
T Consensus 125 ~~~~~~a~~~~~~D~~~~~~~~~~n~le 152 (152)
T 3dob_A 125 DRMVHEAKQFEKEDGEQRERVQARNQLE 152 (152)
T ss_dssp HHHHHHHHHTHHHHHHHHHTCCCCSEEC
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHhhcC
Confidence 9999999999999999999999999875
No 16
>3dqg_A Heat shock 70 kDa protein F; structural genomics, APC90008.12, HSP70 protein, peptide-BIN domain, PSI-2, protein structure initiative; 1.72A {Caenorhabditis elegans}
Probab=99.97 E-value=7.6e-31 Score=243.94 Aligned_cols=150 Identities=77% Similarity=1.095 Sum_probs=143.7
Q ss_pred EeeeccceeEEEEeCCEEEEEeeCCCCCCccceecccccCCccceeeeeccccccccccccceeEEeeecCcccCCCCCc
Q psy3918 381 LLDVTPLSLGIETLGGVFTRLITRNTTIPTKKSQGGVLAGDVTDVLLLDVTPLSLGIETLGGVFTRLITRNTTIPTKKSQ 460 (668)
Q Consensus 381 ~~d~~~~slgi~~~~~~~~~ii~r~~~iP~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~f~~~~~~n~~~p~~~~q 460 (668)
+.|++|+||||++.+|.|.++|+||++||+++++. |+| ..|+|
T Consensus 2 ~~DV~p~slGie~~gg~~~~lI~rnt~iP~~k~~~----------------------------f~t---------~~dnQ 44 (151)
T 3dqg_A 2 NADVTPLSLGIETLGGIMTKLITRNTTIPTKKSQV----------------------------FST---------AADGQ 44 (151)
T ss_dssp --CBCSSCEEEEETTTEEEEEECTTCBSSEEEEEE----------------------------EEE---------SSTTC
T ss_pred cceeeeeEEEEEEcCCEEEEEEECcCccCEEEEEE----------------------------EEE---------CCCCc
Confidence 57999999999999999999999999999999988 999 99999
Q ss_pred ceEEEEEeecCccccccCceeeeEEEeCCCCCCCCCCceEEEEEeCCCceEEEEeeecCCCceeEEEEccCCCCCHHHHH
Q psy3918 461 TQVEIKVHQGEREMAADNKLLGQFTLVGIPPAPRGVPQIEVTFDIDANGIVHVSARDKGTGKEQQIVIQSSGGLSKDEIE 540 (668)
Q Consensus 461 ~~~~i~i~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~id~~Gil~v~a~~~~t~~~~~~~i~~~~~ls~~ei~ 540 (668)
+.+.|.||||++..+.+|.+||+|.|.|+||+|+|.++|+|+|++|.||+|+|+|.+++||++..++|....+||++||+
T Consensus 45 ~~v~i~VyqGe~~~~~dn~~LG~f~l~gipp~p~G~~~IeVtf~iD~nGiL~Vsa~d~~tg~~~~i~I~~~~~Ls~~ei~ 124 (151)
T 3dqg_A 45 TQVQIKVFQGEREMATSNKLLGQFSLVGIPPAPRGVPQVEVTFDIDANGIVNVSARDRGTGKEQQIVIQSSGGLSKDQIE 124 (151)
T ss_dssp CEEEEEEEESSCSBGGGSEEEEEEEEECCCCCCTTCSCEEEEEEECTTSEEEEEEEETTTCCEEEEEEECSSSSCHHHHH
T ss_pred ceEEEEEEEcCCcccccCcEEEEEEEeCCCCCCCCCcEEEEEEEeccCcEEEEEEEEccCCCEeEEEEecCCCCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999988889999999
Q ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHH
Q psy3918 541 NMVKNAEQYATEDKVKRDRVEALNQAE 567 (668)
Q Consensus 541 ~~~~~~~~~~~~D~~~~~~~ea~N~lE 567 (668)
+|++++++|+++|++.+++.+++|.||
T Consensus 125 ~~~~~a~~~~~~D~~~~~~~~~~n~~e 151 (151)
T 3dqg_A 125 NMIKEAEKNAAEDAKRKELVEVINQAE 151 (151)
T ss_dssp HHHHHHHHHHHHHTTCCCEEECBCCCC
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHhhcC
Confidence 999999999999999999999888775
No 17
>2op6_A Heat shock 70 kDa protein D; HSP70/peptide-binding domain, structural genomics, APC90014. 2, protein structure initiative; 1.85A {Caenorhabditis elegans}
Probab=99.95 E-value=3.9e-28 Score=227.47 Aligned_cols=150 Identities=55% Similarity=0.905 Sum_probs=143.7
Q ss_pred EeeeccceeEEEEeCCEEEEEeeCCCCCCccceecccccCCccceeeeeccccccccccccceeEEeeecCcccCCCCCc
Q psy3918 381 LLDVTPLSLGIETLGGVFTRLITRNTTIPTKKSQGGVLAGDVTDVLLLDVTPLSLGIETLGGVFTRLITRNTTIPTKKSQ 460 (668)
Q Consensus 381 ~~d~~~~slgi~~~~~~~~~ii~r~~~iP~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~f~~~~~~n~~~p~~~~q 460 (668)
+.|++|++|||++.+|.|.+||+||++||+++++. |++ ..|+|
T Consensus 2 v~Dv~p~slGi~~~~g~~~~li~rnt~iP~~k~~~----------------------------f~t---------~~d~Q 44 (152)
T 2op6_A 2 NADVNPLTLGIETVGGVMTKLIGRNTVIPTKKSQV----------------------------FST---------AADSQ 44 (152)
T ss_dssp -CCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEE----------------------------EEE---------SSTTC
T ss_pred ceEeecccEEEEEeCCEEEEEEeCCCcccEeEEEE----------------------------EEe---------CCCCC
Confidence 57999999999999999999999999999999988 999 99999
Q ss_pred ceEEEEEeecCccccccCceeeeEEEeCCCCCCCCCCceEEEEEeCCCceEEEEeeecCCCceeEEEEccC-CCCCHHHH
Q psy3918 461 TQVEIKVHQGEREMAADNKLLGQFTLVGIPPAPRGVPQIEVTFDIDANGIVHVSARDKGTGKEQQIVIQSS-GGLSKDEI 539 (668)
Q Consensus 461 ~~~~i~i~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~id~~Gil~v~a~~~~t~~~~~~~i~~~-~~ls~~ei 539 (668)
+.+.|.||||++..+.+|..||+|.|.|+||+|+|.++|+|+|++|.||+|+|++.+..+|++..++|... ++|++++|
T Consensus 45 ~~v~i~v~qGe~~~~~~n~~lg~~~l~gipp~p~G~~~I~V~f~id~nGiL~V~a~d~~tg~~~~i~i~~~~~~ls~eei 124 (152)
T 2op6_A 45 SAVSIVIYEGERPMVMDNHKLGNFDVTGIPPAPRGVPQIEVTFEIDVNGILHVSAEDKGTGNKNKLTITNDHNRLSPEDI 124 (152)
T ss_dssp CCEEEEEEESSCSBGGGSEEEEEEEECCCCCCCTTCSCEEEEEEECTTSCEEEEEEETTTCCEEEEEECSSSSCCCHHHH
T ss_pred cEEEEEEEEeCCccCccCCEeEEEEEECCCCCCCCCceEEEEEEECCCcEEEEEEEEecCCcEEEEEeeccccCCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999877 57999999
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHH
Q psy3918 540 ENMVKNAEQYATEDKVKRDRVEALNQAE 567 (668)
Q Consensus 540 ~~~~~~~~~~~~~D~~~~~~~ea~N~lE 567 (668)
++|++++++|+.+|+..+++.+++|+||
T Consensus 125 ~~~~~~~~~~~~~d~~~~~~~~~kn~~e 152 (152)
T 2op6_A 125 ERMINDADKFAADDQAQKEKVESRNELE 152 (152)
T ss_dssp HHHHHHHHHTHHHHHHHHHHSCCCSEEC
T ss_pred HHHHHHHHHhHhccHHHHHHHHHHhhcC
Confidence 9999999999999999999999999875
No 18
>1q5l_A Chaperone protein DNAK; HSP70, chaperone, heat shock protein; NMR {Escherichia coli} SCOP: b.130.1.1
Probab=99.88 E-value=8.6e-23 Score=186.29 Aligned_cols=121 Identities=65% Similarity=0.967 Sum_probs=109.6
Q ss_pred CCceEEeeeccceeEEEEeCCEEEEEeeCCCCCCccceecccccCCccceeeeeccccccccccccceeEEeeecCcccC
Q psy3918 376 VTDVLLLDVTPLSLGIETLGGVFTRLITRNTTIPTKKSQGGVLAGDVTDVLLLDVTPLSLGIETLGGVFTRLITRNTTIP 455 (668)
Q Consensus 376 ~~~~~~~d~~~~slgi~~~~~~~~~ii~r~~~iP~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~f~~~~~~n~~~p 455 (668)
.+++.+.|++|++|||++.++.|.++|+||++||+++++. |++
T Consensus 14 ~~d~~l~Dv~p~slGIe~~~g~~~~lI~rnt~iP~~k~~~----------------------------f~t--------- 56 (135)
T 1q5l_A 14 PRGSHMVDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQV----------------------------FST--------- 56 (135)
T ss_dssp -------CCCSSCCCEEETTTEECCSSCSSSCSSBCCEEE----------------------------ECC---------
T ss_pred eCcEEEEEeecCcEEEEEECCEEEEEEcCCCeEeEeEeEE----------------------------EEe---------
Confidence 3578899999999999999999999999999999999988 988
Q ss_pred CCCCcceEEEEEeecCccccccCceeeeEEEeCCCCCCCCCCceEEEEEeCCCceEEEEeeecCCCceeEEEEccCCC
Q psy3918 456 TKKSQTQVEIKVHQGEREMAADNKLLGQFTLVGIPPAPRGVPQIEVTFDIDANGIVHVSARDKGTGKEQQIVIQSSGG 533 (668)
Q Consensus 456 ~~~~q~~~~i~i~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~id~~Gil~v~a~~~~t~~~~~~~i~~~~~ 533 (668)
..|+|+.+.|.+||||+..+.+|..||+|.|.|+||+|+|.++|+|+|++|.||+|+|+|.++.||++..++|....+
T Consensus 57 ~~dnQ~~v~I~VyqGe~~~~~~n~~Lg~f~l~gipp~p~G~~~IeVtf~iD~nGiL~V~a~d~~tg~~~~i~i~~~~~ 134 (135)
T 1q5l_A 57 AEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSG 134 (135)
T ss_dssp CSSSCSSCEEEEEECCSSSCSSSEEEEEEECCCCCSCCSSSCCEEEEEEECTTSEEEEEEEETTTCCEEEEEEECSCC
T ss_pred ccCCceEEEEEEEEeCCcccccCcEEEEEEEeCCCCCCCceeEEEEEEEECCCCEEEEEEEECCCCCEEEEEEecCCC
Confidence 899999999999999999999999999999999999999999999999999999999999999999999999986644
No 19
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=99.77 E-value=8.4e-18 Score=172.71 Aligned_cols=170 Identities=19% Similarity=0.225 Sum_probs=134.0
Q ss_pred hhHHHHHHHHHHHHHHHhhcCCCCcEEEeeCCCCCHHHHHHHHHHHHHcCCC--------------------------CC
Q psy3918 169 SQIGAFVLMKMKETSEAFLNTSVKNAVITVPAYFNDSQRQATKDAGQIAGLN--------------------------KG 222 (668)
Q Consensus 169 ~ev~a~iL~~lk~~ae~~l~~~~~~~VITVPa~f~~~qR~a~~~Aa~~AGl~--------------------------~g 222 (668)
.+....+|+++++.++.+.+.....+|+|+|++|+..+|++++++++.+|++ +|
T Consensus 70 ~~~~~~~l~~~~~~~~~~~~~~~~~~v~tvp~~~~~~~~~~~~~~~~~~g~~~~~i~~e~~A~a~~~~~~~~~viDiGgg 149 (272)
T 3h1q_A 70 YIGAIQIVRELKAKVERLLGSELFQAATAIPPGTVGRNAEACGHVVAGAGLELVTLVDEPVAAARALGINDGIVVDIGGG 149 (272)
T ss_dssp HHHHHHHHHHHHHHHHHHSSSCCCEEEEECCSCC---CTTHHHHHHHHTTCEEEEEECHHHHHHHHHTCSSEEEEEECSS
T ss_pred HHHHHHHHHHHHHHHHHhcCCccCeEEEEcCCCCCHHHHHHHHHHHHHcCCeeeecccHHHHHHHHHcCCCEEEEEECCC
Confidence 3566788999999999888888899999999999999999999999999997 33
Q ss_pred eEEEEe-------ccCCCcccccccCccccHHHHHHHHHHHHHHHHHhCCCcceeeecccccccCCCCcceEEEeeHHHH
Q psy3918 223 VFEVKS-------TNGDTLLGGEGLDIRKDQMAMQRLKEAAEKAKIELSSSVQTDINLPYLTMDAGGPKHMNLKLTRSKF 295 (668)
Q Consensus 223 ~~~V~~-------~~gd~~lGG~~iD~~~~~~~~~rL~~~aE~~K~~LS~~~~~~i~i~~l~~~~~~~~~~~~~iTr~ef 295 (668)
..++.- ...+..+||.++|...... +..-...||++|+.++ ++++|
T Consensus 150 st~~~~~~~g~~~~~~~~~~Gg~~~~~~l~~~-l~~~~~~ae~~k~~~~--------------------------~~~~~ 202 (272)
T 3h1q_A 150 TTGIAVIEKGKITATFDEPTGGTHLSLVLAGS-YKIPFEEAETIKKDFS--------------------------RHREI 202 (272)
T ss_dssp CEEEEEEETTEEEEECCBSCCHHHHHHHHHHH-HTCCHHHHHHHHHSST--------------------------THHHH
T ss_pred cEEEEEEECCEEEEEecCCCcHHHHHHHHHHH-hCCCHHHHHHHHHhcC--------------------------CHHHH
Confidence 333211 1234457777665321110 1112467888888865 47889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCCCCceEEEecCccCcHHHHHHHHHHhCCCCCCCCCchhHHHhhHHHhh
Q psy3918 296 ESLVGDLIKKTVNPCQKALQDADCKNSDIGEVLLVGGMTRMPKVQSTVQEIFGKVPSRAVNPDEAVAIGAAVQG 369 (668)
Q Consensus 296 e~l~~~l~~~i~~~i~~~L~~a~~~~~~I~~ViLVGGssriP~V~~~l~~~Fg~~~~~~~npdeaVA~GAai~a 369 (668)
++++.++++++.+.+.+.|+..+ +++.|+|+||++++|.++++|++.|+.++..+.||++++|+|||++|
T Consensus 203 ~~~~~~~~~~i~~~i~~~l~~~~----~~~~ivL~GG~a~~~~l~~~l~~~l~~~v~~~~~p~~a~a~Gaal~a 272 (272)
T 3h1q_A 203 MRVVRPVIEKMALIVKEVIKNYD----QTLPVYVVGGTAYLTGFSEEFSRFLGKEVQVPIHPLLVTPLGIALFG 272 (272)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTSC----SSCCEEEESGGGGSTTHHHHHHHHHSSCCBCCSSGGGHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHhcC----CCCEEEEECCccchhhHHHHHHHHhCCCccccCChHHHHHHHHHhcC
Confidence 99999999999999999988664 47899999999999999999999999988889999999999999875
No 20
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=99.77 E-value=3.2e-19 Score=192.26 Aligned_cols=279 Identities=14% Similarity=0.143 Sum_probs=166.6
Q ss_pred ceEEEEEcCCceEEEEEEeCCeeeEecCCCCCccccEEEEEecCCcEEEcHHHHHhhhhCCCchhhHhhhhhCCCCCChH
Q psy3918 57 GQVIGIDLGTTNSCVAVMEGKQAKVIENSEGSRTTPSVVAFTKDGERLVGTPARRQAVTNSANTFYATKRLIGRRFDDPE 136 (668)
Q Consensus 57 ~~vvGIDlGTt~s~vA~~~~~~~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~~i~~~KrllG~~~~d~~ 136 (668)
..++|||+|||+++++++.++.+.+. ..|...+||.+. +.....+++.+...+|+++++. .
T Consensus 13 ~~~vgiDiGt~~i~~~~~~~~~~~i~--~~g~~~~ps~~~-------------~~g~i~d~~~~~~~ik~~~~~~-~--- 73 (377)
T 2ych_A 13 VEALGLEIGASALKLVEVSGNPPALK--ALASRPTPPGLL-------------MEGMVAEPAALAQEIKELLLEA-R--- 73 (377)
T ss_dssp CCCEEEEECSSEEEEEEEETTTTEEE--EEEEEECCTTSE-------------ETTEESCHHHHHHHHHHHHHHH-T---
T ss_pred CceEEEEeCCCeEEEEEEeCCceEEE--EEEeEECCCCcc-------------cCCCcCCHHHHHHHHHHHHHHc-C---
Confidence 46899999999999999886665552 345555666432 1223457788888999998751 0
Q ss_pred HHHhhccCceEEEEcCCCCeeEeCCCCceeChhhHHHHHHHHHHHHHHHhhcCCCCcEEEeeCCCCCHHH----------
Q psy3918 137 IKKDMKNLSYKIVRASNGDAWVQGSDEKVYSPSQIGAFVLMKMKETSEAFLNTSVKNAVITVPAYFNDSQ---------- 206 (668)
Q Consensus 137 v~~~~~~~p~~~~~~~~~~~~i~~~~~~~~~~~ev~a~iL~~lk~~ae~~l~~~~~~~VITVPa~f~~~q---------- 206 (668)
...+++ .+................++++++... ++..++++++.++.++||++| +.+.+
T Consensus 74 --~~~~~v---~~~i~~~~~~~~~~~~~~v~~~el~~~----i~~ea~~~~~~~~~~~vid~~--~~~~~~~~~~~~~~~ 142 (377)
T 2ych_A 74 --TRKRYV---VTALSNLAVILRPIQVPKMPLKEMEEA----VRWEAERYIPFPIDEVVLDFA--PLTPLSEVQEGEQVQ 142 (377)
T ss_dssp --CCCCEE---EEEECGGGCEEEEEEEECCCHHHHHHH----HHHHHGGGCSSCC-CEEEEEE--ESSCGGGSCTTSEEE
T ss_pred --CCcceE---EEEecCCcEEEEEEECCCCCHHHHHHH----HHHHHhhcCCCChhHceEEEE--EeCCCCCCCCcceeE
Confidence 001111 111111111111111235677776543 345778889999999999998 44433
Q ss_pred ----------HHHHHHHHHHcCCC---------------------------------CCeEEEEe-------ccCCCccc
Q psy3918 207 ----------RQATKDAGQIAGLN---------------------------------KGVFEVKS-------TNGDTLLG 236 (668)
Q Consensus 207 ----------R~a~~~Aa~~AGl~---------------------------------~g~~~V~~-------~~gd~~lG 236 (668)
.+++++|++.|||+ +|++++.- ..++..+|
T Consensus 143 v~~va~~~~~v~~~~~~~~~aGl~~~~i~~ep~Aaa~~~~~~~~~~~~~~~~vvDiGggttdi~i~~~g~~~~~~~~~~G 222 (377)
T 2ych_A 143 VMVAAARQEAVAGVLEALRGAGLVPVVLDVKPFAGLYPLEARLAEEPDRVFLVLDIGAESTSLVLLRGDKPLAVRVLTLS 222 (377)
T ss_dssp EEEEEEEHHHHHHHHHHHHHTTCEEEEEEEHHHHTTGGGHHHHHTSTTCEEEEEEECSSCEEEEEEETTEEEEEEEESCS
T ss_pred EEEEEecHHHHHHHHHHHHHCCCceEEEecchHHHHHHHHhhcccccCCeEEEEEECCCcEEEEEEECCEEEEEEeeech
Confidence 38899999999998 22222211 12334478
Q ss_pred ccccCccccHHHHHHHHHHHHHHHHHhCCCcceeeecccccccCCCCcceEEEeeHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy3918 237 GEGLDIRKDQMAMQRLKEAAEKAKIELSSSVQTDINLPYLTMDAGGPKHMNLKLTRSKFESLVGDLIKKTVNPCQKALQD 316 (668)
Q Consensus 237 G~~iD~~~~~~~~~rL~~~aE~~K~~LS~~~~~~i~i~~l~~~~~~~~~~~~~iTr~efe~l~~~l~~~i~~~i~~~L~~ 316 (668)
|+++|..... .+.-...+||++|+.++.............. . ......++|++|+++++|+++++...|++.|+.
T Consensus 223 G~~i~~~i~~-~~~~~~~~aE~~K~~~~~~~~~~~~~~~~i~-~---~~~~~~i~~~~~~~~i~~~~~~i~~~i~~~l~~ 297 (377)
T 2ych_A 223 GKDFTEAIAR-SFNLDLLAAEEVKRTYGMATLPTEDEELLLD-F---DAERERYSPGRIYDAIRPVLVELTQELRRSLEF 297 (377)
T ss_dssp HHHHHHHHHH-HTTCCHHHHHHHHHHTC-----------------------------CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-HhCCCHHHHHHHHhhcccccccccccccccc-c---ccccccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8777642211 0111256899999999864322111100000 0 123468999999999999999999999999995
Q ss_pred --cCCCCCCCceEEEecCccCcHHHHHHHHHHhCCCCCCC--------------------CCchhHHHhhHHHhhh
Q psy3918 317 --ADCKNSDIGEVLLVGGMTRMPKVQSTVQEIFGKVPSRA--------------------VNPDEAVAIGAAVQGG 370 (668)
Q Consensus 317 --a~~~~~~I~~ViLVGGssriP~V~~~l~~~Fg~~~~~~--------------------~npdeaVA~GAai~aa 370 (668)
++.....++.|+|+||++++|.+++.+++.|+.++... .+|..++|+|+|+++.
T Consensus 298 ~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~l~~~v~~~~P~~~v~~~~~~~~~~~l~~~~p~~a~a~Glal~~~ 373 (377)
T 2ych_A 298 FRIQLEEASPEVGYLLGGGSKLRGLASLLTDTLGVNLEPVNPWEAVAVDPKRFESEQLQEIGPEFAVALGLALRGV 373 (377)
T ss_dssp HHHHC---CCSEEEEESGGGGSTTHHHHHHHHHTSEEEECCGGGGSBCCTTTSCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHhccCCCCcCEEEEECccccchhHHHHHHHHhCCCeEecCchhhcccCcccCCHHHHHhhhHHHHHHHHHHHcCC
Confidence 35666789999999999999999999999998653221 1344567888887764
No 21
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=99.68 E-value=3.8e-17 Score=175.86 Aligned_cols=254 Identities=14% Similarity=0.137 Sum_probs=157.0
Q ss_pred eEEEEEcCCceEEEEEEeCCeeeEecCCCCCccccEEEEEecC---------CcEEEcHHHHHhhhhCCCchhhHhhhhh
Q psy3918 58 QVIGIDLGTTNSCVAVMEGKQAKVIENSEGSRTTPSVVAFTKD---------GERLVGTPARRQAVTNSANTFYATKRLI 128 (668)
Q Consensus 58 ~vvGIDlGTt~s~vA~~~~~~~~ii~n~~g~~~~PS~V~~~~~---------~~~~vG~~A~~~~~~~p~~~i~~~Krll 128 (668)
..|+||+||+++++++..++.|.++ +||+|+.... ...+||.+|.... . ...+++
T Consensus 6 ~~ivID~Gs~~~k~G~~~~~~p~~~--------~ps~v~~~~~~~~~~~~~~~~~~vG~~a~~~~----~--~~~~~~-- 69 (375)
T 2fxu_A 6 TALVCDNGSGLVKAGFAGDDAPRAV--------FPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR----G--ILTLKY-- 69 (375)
T ss_dssp CCEEEEECSSEEEEEETTCSSCSEE--------EECCEEEECTTTC-------CCEEHHHHHHHT----T--SEEEEC--
T ss_pred ceEEEECCCCeEEEEECCCCCCcee--------eccccccccccccccCCCCCCeEechhHhhcC----c--ccceec--
Confidence 5799999999999998866655532 3555555322 3467888886541 0 011111
Q ss_pred CCCCCChHHHHhhccCceEEEEcCCCCeeEeCCCCceeChhhHHHHHHHHHHHHHHHhhcCC--CCcEEEeeCCCCCHHH
Q psy3918 129 GRRFDDPEIKKDMKNLSYKIVRASNGDAWVQGSDEKVYSPSQIGAFVLMKMKETSEAFLNTS--VKNAVITVPAYFNDSQ 206 (668)
Q Consensus 129 G~~~~d~~v~~~~~~~p~~~~~~~~~~~~i~~~~~~~~~~~ev~a~iL~~lk~~ae~~l~~~--~~~~VITVPa~f~~~q 206 (668)
|+. +|.... -+....+++|+.. +.++.. -..+|||+|++++..+
T Consensus 70 ----------------Pi~--------------~G~i~d-~d~~e~i~~~~~~---~~L~~~~~~~~vvit~p~~~~~~~ 115 (375)
T 2fxu_A 70 ----------------PIE--------------HGIITN-WDDMEKIWHHTFY---NELRVAPEEHPTLLTEAPLNPKAN 115 (375)
T ss_dssp ----------------SEE--------------TTEECC-HHHHHHHHHHHHH---TTSCCCGGGSCEEEEECTTCCHHH
T ss_pred ----------------ccc--------------CCcccC-HHHHHHHHHHHHH---HhcCCCCcCCcEEEEeCCCCcHHH
Confidence 111 111111 1233444555442 233322 2459999999999999
Q ss_pred HHHHHHHH-HHcCCC--------------------------CCeEEEEe---------ccCCCcccccccCccccHHHHH
Q psy3918 207 RQATKDAG-QIAGLN--------------------------KGVFEVKS---------TNGDTLLGGEGLDIRKDQMAMQ 250 (668)
Q Consensus 207 R~a~~~Aa-~~AGl~--------------------------~g~~~V~~---------~~gd~~lGG~~iD~~~~~~~~~ 250 (668)
|+++.+++ +.+|++ +|++.|.. ..+...+||+++|.........
T Consensus 116 r~~~~e~~fe~~g~~~~~~~~e~~aaa~a~g~~~~lVvDiG~gtt~v~~v~~G~~~~~~~~~~~~GG~~lt~~l~~~l~~ 195 (375)
T 2fxu_A 116 REKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTE 195 (375)
T ss_dssp HHHHHHHHHHTTCCSEEEEEEHHHHHHHHTTCSSEEEEEECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCcceEEEccchheeeeecCCCeEEEEEcCCCceEEeEeECCEEeccceEEeccCHHHHHHHHHHHHHh
Confidence 99888764 778887 33444321 1234568998877432222211
Q ss_pred H--------HHHHHHHHHHHhCCC----------------cceeeecccccccCCCCcceEEEeeHHHH---HHHHHHH-
Q psy3918 251 R--------LKEAAEKAKIELSSS----------------VQTDINLPYLTMDAGGPKHMNLKLTRSKF---ESLVGDL- 302 (668)
Q Consensus 251 r--------L~~~aE~~K~~LS~~----------------~~~~i~i~~l~~~~~~~~~~~~~iTr~ef---e~l~~~l- 302 (668)
+ -...+|++|+.++.. ....+.+|. ...++|+++.| |.+++|.
T Consensus 196 ~~~~~~~~~~~~~~e~iK~~~~~v~~~~~~e~~~~~~~~~~~~~~~lpd---------g~~i~i~~erf~~~E~lf~p~~ 266 (375)
T 2fxu_A 196 RGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPD---------GQVITIGNERFRCPETLFQPSF 266 (375)
T ss_dssp HTCCCCSHHHHHHHHHHHHHHCCCCSSHHHHHHHHHHCSTTCEEEECTT---------SCEEEESTHHHHHHHTTTCGGG
T ss_pred cCCCCCcHHHHHHHHHHHHHHHhhcccHHHHHHhhcccCccCeEEECCC---------CCEEEEChhheechHhhCCCcc
Confidence 1 234677777776532 122233321 23578999888 4555553
Q ss_pred ----HHHHHHHHHHHHHHcC--CCCCCCceEEEecCccCcHHHHHHHHHHhCC--------CCCCCCCchhHHHhhHHHh
Q psy3918 303 ----IKKTVNPCQKALQDAD--CKNSDIGEVLLVGGMTRMPKVQSTVQEIFGK--------VPSRAVNPDEAVAIGAAVQ 368 (668)
Q Consensus 303 ----~~~i~~~i~~~L~~a~--~~~~~I~~ViLVGGssriP~V~~~l~~~Fg~--------~~~~~~npdeaVA~GAai~ 368 (668)
...+.++|.++|..+. +....++.|+|+||+|++|.++++|++.|+. ++....+|+.++++||+++
T Consensus 267 ~~~~~~~i~~~i~~~i~~~~~~~~~~l~~~IvLtGG~s~~pG~~~rl~~el~~~~p~~~~v~v~~~~~p~~~~w~G~si~ 346 (375)
T 2fxu_A 267 IGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIL 346 (375)
T ss_dssp GTCCSCCHHHHHHHHHHTSCHHHHHHHHTCEEEESGGGCSTTHHHHHHHHHHHHSCTTCCCCEECCTTTTSHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHhCCHHHHHHHHhCcEeeCCCCCCccHHHHHHHHHHHhCCCCeeEEEEcCCCCCccEEcchHHh
Confidence 2457778888887653 2233468899999999999999999998851 2235678999999999999
Q ss_pred hh
Q psy3918 369 GG 370 (668)
Q Consensus 369 aa 370 (668)
|.
T Consensus 347 a~ 348 (375)
T 2fxu_A 347 AS 348 (375)
T ss_dssp HH
T ss_pred hC
Confidence 97
No 22
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=99.66 E-value=2.1e-16 Score=172.59 Aligned_cols=177 Identities=13% Similarity=0.113 Sum_probs=118.7
Q ss_pred CCcEEEeeCCCCCHHHHHHHHHHH-HHcCCC-------------C---------C--eEEEEecc---------------
Q psy3918 191 VKNAVITVPAYFNDSQRQATKDAG-QIAGLN-------------K---------G--VFEVKSTN--------------- 230 (668)
Q Consensus 191 ~~~~VITVPa~f~~~qR~a~~~Aa-~~AGl~-------------~---------g--~~~V~~~~--------------- 230 (668)
...+|||+|++|+..+|+++.+++ +.+|++ . . +.-|.+.+
T Consensus 107 ~~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~l~~ep~aa~~a~~~~~~~~~~~~~glVvDiG~gtt~v~~v~~G~~~ 186 (418)
T 1k8k_A 107 DHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVIPVAEGYVI 186 (418)
T ss_dssp GCCEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHGGGSTTCCSCCCCEEEEEESSSCEEEEEEETTEEC
T ss_pred CCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCEEEEechHHHHhhhhhcccccCCCCCeEEEEEcCCCceEEEEeECCEEc
Confidence 457999999999999999999998 877776 1 0 11222222
Q ss_pred ----CCCcccccccCccccHHHHH--------HHHHHHHHHHHHhCCCcc-----------------eeeecccccccCC
Q psy3918 231 ----GDTLLGGEGLDIRKDQMAMQ--------RLKEAAEKAKIELSSSVQ-----------------TDINLPYLTMDAG 281 (668)
Q Consensus 231 ----gd~~lGG~~iD~~~~~~~~~--------rL~~~aE~~K~~LS~~~~-----------------~~i~i~~l~~~~~ 281 (668)
++..+||+++|......... .-...+|++|+.++.... ..+.+|...
T Consensus 187 ~~~~~~~~lGG~~lt~~l~~~l~~~~~~~~~~~~~~~~e~iK~~~~~v~~~~~~e~~~~~~~~~~~~~~~~lpd~~---- 262 (418)
T 1k8k_A 187 GSCIKHIPIAGRDITYFIQQLLRDREVGIPPEQSLETAKAVKERYSYVCPDLVKEFNKYDTDGSKWIKQYTGINAI---- 262 (418)
T ss_dssp GGGCEEESCSHHHHHHHHHHHHHTTCCCCCGGGHHHHHHHHHHHHCCCCSCHHHHHHHHHHSGGGTCEEEEEECTT----
T ss_pred ccceEEEeCcHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhhchhcccHHHHHHhhcccccccceeEECCCCC----
Confidence 23447777766422111110 113578999998875321 223333321
Q ss_pred CCcceEEEeeHHHH---HHHHHHHH------HHHHHHHHHHHHHcC--CCCCCCceEEEecCccCcHHHHHHHHHHhCCC
Q psy3918 282 GPKHMNLKLTRSKF---ESLVGDLI------KKTVNPCQKALQDAD--CKNSDIGEVLLVGGMTRMPKVQSTVQEIFGKV 350 (668)
Q Consensus 282 ~~~~~~~~iTr~ef---e~l~~~l~------~~i~~~i~~~L~~a~--~~~~~I~~ViLVGGssriP~V~~~l~~~Fg~~ 350 (668)
.+....++|++++| |.++.|.+ ..+.++|.++|..+. +....++.|+|+||+|++|.++++|++.|+..
T Consensus 263 ~~~~~~i~l~~erf~~~E~lF~P~~~~~~~~~~i~~~i~~si~~~~~~~~~~l~~~IvL~GG~s~~pg~~~rl~~el~~~ 342 (418)
T 1k8k_A 263 SKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQNCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDLKRT 342 (418)
T ss_dssp TCCEEEEEECTHHHHHHHTTTCGGGTCTTCCCCHHHHHHHHHHHSCGGGTTHHHHCEEEESGGGCSTTHHHHHHHHHHHH
T ss_pred CCcccEEEeChHHhhCcHhhCCCccCCCCCCCCHHHHHHHHHHcCCHHHHHHHHhceEEeCCccccccHHHHHHHHHHHh
Confidence 12455789999999 66666642 468888899998764 34556789999999999999999999766321
Q ss_pred ------------------------CCCCCCchhHHHhhHHHhhhh
Q psy3918 351 ------------------------PSRAVNPDEAVAIGAAVQGGV 371 (668)
Q Consensus 351 ------------------------~~~~~npdeaVA~GAai~aa~ 371 (668)
+..+.+|..++.+||+++|..
T Consensus 343 ~~~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilasl 387 (418)
T 1k8k_A 343 VDARLKLSEELSGGRLKPKPIDVQVITHHMQRYAVWFGGSMLAST 387 (418)
T ss_dssp HHHHHHHHHHHC----CCCCCCCCEECCTTCTTHHHHHHHHHTTS
T ss_pred hccccccccccccccCCCCceeEEEeCCCccccceeHhHHHHHcC
Confidence 122456789999999999873
No 23
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=99.65 E-value=4.3e-17 Score=173.37 Aligned_cols=180 Identities=15% Similarity=0.134 Sum_probs=117.9
Q ss_pred CCceeChhhHHHHHHHHHHHHHHHhhcCCCCcEE--EeeCCCCCHHHHHHHHHHHHHc--------C----C--C-----
Q psy3918 162 DEKVYSPSQIGAFVLMKMKETSEAFLNTSVKNAV--ITVPAYFNDSQRQATKDAGQIA--------G----L--N----- 220 (668)
Q Consensus 162 ~~~~~~~~ev~a~iL~~lk~~ae~~l~~~~~~~V--ITVPa~f~~~qR~a~~~Aa~~A--------G----l--~----- 220 (668)
....+.+++..++++..|+..++...+.+ .++| |+||++|++.||+++++|+.-+ | + .
T Consensus 91 ~~~~~~~~~~~~ll~~~l~~~~~~~~~~~-~~vvL~i~vP~~~~~~er~a~~~~~~~~~~~v~~~~G~~~~i~v~~v~li 169 (346)
T 2fsj_A 91 GDGRLASKEAFPLIAAALWESGIHNDGSP-VDLVIGSGTPLGTFDLEVKAAKEALENKVLTVTGPEGEVRQFNITRLIMR 169 (346)
T ss_dssp STTCTTSTTTHHHHHHHHHHHCCCC---C-EEEEEEEEECGGGHHHHHHHHHHHHTTEEEEEECGGGCEEEEEEEEEEEE
T ss_pred CCCcccChhHHHHHHHHHHHhhhccCCCc-eEEEEcccCCHHHHHHHHHHHHHHHcCCCcEEEeCCCceEEEEEEEEEEE
Confidence 33455668888899988887753333333 5699 9999999999999999996654 3 1 1
Q ss_pred -------------------CCeEEEEeccCCC---------------------cccccccCccccHHHHHHHHHHHHHHH
Q psy3918 221 -------------------KGVFEVKSTNGDT---------------------LLGGEGLDIRKDQMAMQRLKEAAEKAK 260 (668)
Q Consensus 221 -------------------~g~~~V~~~~gd~---------------------~lGG~~iD~~~~~~~~~rL~~~aE~~K 260 (668)
.+.+-|.+.+|.+ .+||++++. .+ ++.+|
T Consensus 170 ~Ep~AAa~~~l~~~~~~~~~~~vlVvDIGgGTtDv~vi~~~~g~~v~~~s~~~~lGg~~i~~--------~I---~~~i~ 238 (346)
T 2fsj_A 170 PQGVGAALYLLNQGIIEQQPGYGVVIDVGSRTTDVLTINLMDMEPVVELSFSLQIGVGDAIS--------AL---SRKIA 238 (346)
T ss_dssp ETTHHHHHHHHHHTSSCCCSSEEEEEEECSSCEEEEEEETTTTEECGGGCEEESCCHHHHHH--------HH---HHHHH
T ss_pred ccHHHHHHHhhccccccccCCcEEEEECCCCcEEEEEEEecCCEEEeecCCCcchhHHHHHH--------HH---HHHHH
Confidence 0222222222222 233332221 11 23334
Q ss_pred HHhCC--Cc-------ceeeecccccccCCCCcceEEEeeHHHH-HHHHHHHHHHHHHHHHHHHHHcCCCCCCCceEEEe
Q psy3918 261 IELSS--SV-------QTDINLPYLTMDAGGPKHMNLKLTRSKF-ESLVGDLIKKTVNPCQKALQDADCKNSDIGEVLLV 330 (668)
Q Consensus 261 ~~LS~--~~-------~~~i~i~~l~~~~~~~~~~~~~iTr~ef-e~l~~~l~~~i~~~i~~~L~~a~~~~~~I~~ViLV 330 (668)
+.... .- ...+.+. + . .++++++ +++++++++++.+.|+++|+++ .++++.|+|+
T Consensus 239 ~~~g~~~~i~~~~~e~~~~~~~~-------g-~----~~~~~~i~~~~i~~~~~~i~~~i~~~l~~~---~~~i~~IvL~ 303 (346)
T 2fsj_A 239 KETGFVVPFDLAQEALSHPVMFR-------Q-K----QVGGPEVSGPILEDLANRIIENIRLNLRGE---VDRVTSLIPV 303 (346)
T ss_dssp HHHCCCCCHHHHHHHTTSCEEET-------T-E----EECSHHHHHHHHHHHHHHHHHHHHHHHGGG---GGGEEEEEEE
T ss_pred HHhCCCcCCCHHHHhcCCeEeEC-------C-c----cCCHHHHHHHHHHHHHHHHHHHHHHHHHhh---hhcccEEEEE
Confidence 33322 10 0011110 1 1 3569999 9999999999999999999876 4578999999
Q ss_pred cCccCcHHHHHHHHHHhCCCCC--CCCCchhHHHhhHHHhhh
Q psy3918 331 GGMTRMPKVQSTVQEIFGKVPS--RAVNPDEAVAIGAAVQGG 370 (668)
Q Consensus 331 GGssriP~V~~~l~~~Fg~~~~--~~~npdeaVA~GAai~aa 370 (668)
||++++ +++.|++.|+.... ...||++|+|+|+..++.
T Consensus 304 GGga~l--l~~~l~~~~~~~~i~~~~~~P~~ava~G~~~~~~ 343 (346)
T 2fsj_A 304 GGGSNL--IGDRFEEIAPGTLVKIKPEDLQFANALGYRDAAE 343 (346)
T ss_dssp STTHHH--HGGGGGGGSTTCBCCCCTTTTTTHHHHHHHHHHH
T ss_pred CCcHHH--HHHHHHHHCcCcEEeccCCCcHHHHHHHHHHHHh
Confidence 999999 99999999974321 267999999999998764
No 24
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=99.60 E-value=1.1e-14 Score=158.25 Aligned_cols=159 Identities=15% Similarity=0.145 Sum_probs=118.1
Q ss_pred HHHHHHHHHHHcCCC-------------------------------CCeEEEEe-------ccCCCcccccccCccccHH
Q psy3918 206 QRQATKDAGQIAGLN-------------------------------KGVFEVKS-------TNGDTLLGGEGLDIRKDQM 247 (668)
Q Consensus 206 qR~a~~~Aa~~AGl~-------------------------------~g~~~V~~-------~~gd~~lGG~~iD~~~~~~ 247 (668)
.-+.+.+|++.|||+ +|++++.- ..++..+||+++|.... .
T Consensus 169 ~v~n~~~~~~~AGL~v~~lv~ep~Aaa~a~l~~~~~~~gv~vvDiGggttdisi~~~g~~~~~~~i~~GG~~it~dIa-~ 247 (419)
T 4a2a_A 169 VYEMFYNFLQDTVKSPFQLKSSLVSTAEGVLTTPEKDRGVVVVNLGYNFTGLIAYKNGVPIKISYVPVGMKHVIKDVS-A 247 (419)
T ss_dssp HHHHHHHHHHTTSCSCEEEEEHHHHHHHHHCCHHHHHHCEEEEEECSSSEEEEEEETTEEEEEEEESCCHHHHHHHHH-H
T ss_pred HHHHHHHHHHHcCCcEEEEEEHHHHHHHHhhccccccCCEEEEEECCCcEEEEEEECCEEEEEEecccHHHHHHHHHH-H
Confidence 446788999999998 44444321 22355689998874322 2
Q ss_pred HHHHHHHHHHHHHHHhCCC-----cceeeecccccccCCCCcceEEEeeHHHHHHHHHHHHHHHHHHHHHHHHHcCCC--
Q psy3918 248 AMQRLKEAAEKAKIELSSS-----VQTDINLPYLTMDAGGPKHMNLKLTRSKFESLVGDLIKKTVNPCQKALQDADCK-- 320 (668)
Q Consensus 248 ~~~rL~~~aE~~K~~LS~~-----~~~~i~i~~l~~~~~~~~~~~~~iTr~efe~l~~~l~~~i~~~i~~~L~~a~~~-- 320 (668)
.+.....+||++|+.++.. ....+.++.+. ......++|++|.++++|+++++.+.|++.|+.++.+
T Consensus 248 ~l~~~~~~AE~iK~~~g~a~~~~~~~~~i~v~~~~------~~~~~~is~~~l~~ii~p~veei~~~V~~~L~~~~~~~p 321 (419)
T 4a2a_A 248 VLDTSFEESERLIITHGNAVYNDLKEEEIQYRGLD------GNTIKTTTAKKLSVIIHARLREIMSKSKKFFREVEAKIV 321 (419)
T ss_dssp HHTCCHHHHHHHHHHHCCSCCTTCCCCEEEEECTT------SCSEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC-
T ss_pred HHCCCHHHHHHHHHHhccCcccCCCCceEEEeecC------CccceEEcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcc
Confidence 2334568999999999752 34456666543 2356899999999999999999999999999999983
Q ss_pred ----CCCCceEEEecCccCcHHHHHHHHHHhCCCCC--C---------------CCCchhHHHhhHHHhhhh
Q psy3918 321 ----NSDIGEVLLVGGMTRMPKVQSTVQEIFGKVPS--R---------------AVNPDEAVAIGAAVQGGV 371 (668)
Q Consensus 321 ----~~~I~~ViLVGGssriP~V~~~l~~~Fg~~~~--~---------------~~npdeaVA~GAai~aa~ 371 (668)
...+++|+|+||+|++|.+++++++.||.++. . .-+|..++|.|.++++..
T Consensus 322 ~~~~~~~~~~IvLtGG~s~lpgl~e~~~~~~g~~vri~~~~~~~p~~~~~~~~~~~~P~~~t~~Gl~~~~~~ 393 (419)
T 4a2a_A 322 EEGEIGIPGGVVLTGGGAKIPRINELATEVFKSPVRTGCYANSDRPSIINADEVANDPSFAAAFGNVFAVSE 393 (419)
T ss_dssp -------TTCEEEESGGGGSTTHHHHHHHHHTSCEEECCGGGSSSCCCBTCHHHHTCGGGHHHHHTTCC---
T ss_pred cccccccCCEEEEECchhchhhHHHHHHHHHCCCeEEEecCCCCchhccCcccccCCchHHHHHHHHHHHhh
Confidence 45689999999999999999999999986531 1 147899999999988754
No 25
>3lof_A Heat shock 70 kDa protein 1; structural genomics, HSPA1B, HSP70, PSI-2, prote structure initiative; 2.40A {Homo sapiens} PDB: 2lmg_A
Probab=99.41 E-value=6.8e-13 Score=117.21 Aligned_cols=82 Identities=18% Similarity=0.297 Sum_probs=76.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH--HHccCCHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q psy3918 555 VKRDRVEALNQAESIVHDTESKMEE--FKAQLPAEECAKLKEQIAELQKLIANKDSVDPEELRKATTTLQQASLKLFEMA 632 (668)
Q Consensus 555 ~~~~~~ea~N~lE~~i~~~~~~l~~--~~~~~~~~e~~~i~~~l~~~~~wl~~~~~~~~~~~~~~~~~L~~~~~~i~~r~ 632 (668)
++|++.+++|.||+|||.++..|.+ +...++++++.+|...|+++++||++++.++.++|+.++++|++.+.+|+.++
T Consensus 3 ~~re~ieakN~lEs~iy~~e~~l~e~~~~~kl~~eek~~i~~~i~e~~~wL~~~~~a~~e~i~~k~~eL~~~~~~i~~k~ 82 (113)
T 3lof_A 3 AAAERVSAKNALESYAFNMKSAVEDEGLKGKISEADKKKVLDKCQEVISWLDANTLAEKDEFEHKRKELEQVCNPIISGL 82 (113)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCGGGBTTBCHHHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcchhhhccCCHHHHHHHHHHHHHHHHHHHcCCcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 4678999999999999999999976 88999999999999999999999998877899999999999999999999999
Q ss_pred HHHH
Q psy3918 633 YKKM 636 (668)
Q Consensus 633 ~~~~ 636 (668)
|+..
T Consensus 83 y~~~ 86 (113)
T 3lof_A 83 YQGA 86 (113)
T ss_dssp HHC-
T ss_pred HHhc
Confidence 9853
No 26
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=99.34 E-value=1.7e-13 Score=140.96 Aligned_cols=75 Identities=17% Similarity=0.174 Sum_probs=60.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCCCCCceEEEecCccCcHHHHHHHHHHhCCCCCCCCCchhHHHhhHHHhhhhhc
Q psy3918 295 FESLVGDLIKKTVNPCQKALQDADCKNSDIGEVLLVGGMTRMPKVQSTVQEIFGKVPSRAVNPDEAVAIGAAVQGGVLA 373 (668)
Q Consensus 295 fe~l~~~l~~~i~~~i~~~L~~a~~~~~~I~~ViLVGGssriP~V~~~l~~~Fg~~~~~~~npdeaVA~GAai~aa~ls 373 (668)
.++++..+.+.+.+.+....... ..++.|+|+||.+++|.|++.+++.||.++..+.||++++|+|||++|....
T Consensus 182 ~~di~a~~~~~v~~~l~~~~~~~----~~~~~vvl~GGva~n~~lr~~l~~~~g~~~~~p~~p~~~~A~GAAl~A~~~~ 256 (276)
T 4ehu_A 182 IEDIVAGIHTSVAKRVSSLVKRI----GVQRNVVMVGGVARNSGIVRAMAREINTEIIVPDIPQLTGALGAALYAFDEA 256 (276)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH----CCCSSEEEESGGGGCHHHHHHHHHHHTSCEECCSSGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc----ccCCeEEEecCccchHHHHHHHHHHHCCCeeeCCCcchHHHHHHHHHHHHHH
Confidence 35566666666655554444433 4578999999999999999999999999999999999999999999997543
No 27
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=99.33 E-value=1.3e-13 Score=144.94 Aligned_cols=72 Identities=15% Similarity=0.188 Sum_probs=58.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCceEEEecCccCcHHHHHHHHHHhCC---CCCCCCCchhHHHhhHHHh
Q psy3918 292 RSKFESLVGDLIKKTVNPCQKALQDADCKNSDIGEVLLVGGMTRMPKVQSTVQEIFGK---VPSRAVNPDEAVAIGAAVQ 368 (668)
Q Consensus 292 r~efe~l~~~l~~~i~~~i~~~L~~a~~~~~~I~~ViLVGGssriP~V~~~l~~~Fg~---~~~~~~npdeaVA~GAai~ 368 (668)
++++.+++++.++++.+.|.+.+++. .+++.|+|+||++++ +++.|++.|+. ++....||++|+|+||+++
T Consensus 245 ~~~~~~~i~~~~~~~~~~i~~~i~~~----~~~~~vvl~GGga~l--l~~~l~~~~~~~~~~~~~~~~P~~a~A~G~~~~ 318 (320)
T 2zgy_A 245 ISIVTEAMNEALRKLEQRVLNTLNEF----SGYTHVMVIGGGAEL--ICDAVKKHTQIRDERFFKTNNSQYDLVNGMYLI 318 (320)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTC----CCCCEEEEESTTHHH--HHHHHHHTSCCCGGGEECCSCGGGHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhh----cCCCeEEEECChHHH--HHHHHHHHhCCCCCceeeCCCcHHHHHHHHHHh
Confidence 45666677777777776666666542 578999999999997 99999999987 4677899999999999987
Q ss_pred h
Q psy3918 369 G 369 (668)
Q Consensus 369 a 369 (668)
|
T Consensus 319 ~ 319 (320)
T 2zgy_A 319 G 319 (320)
T ss_dssp H
T ss_pred c
Confidence 5
No 28
>2p32_A Heat shock 70 kDa protein A; three-helix bundle, chaperone; 3.20A {Caenorhabditis elegans}
Probab=99.28 E-value=2.1e-12 Score=115.28 Aligned_cols=85 Identities=14% Similarity=0.245 Sum_probs=74.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH--HHccCCHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q psy3918 556 KRDRVEALNQAESIVHDTESKMEE--FKAQLPAEECAKLKEQIAELQKLIANKDSVDPEELRKATTTLQQASLKLFEMAY 633 (668)
Q Consensus 556 ~~~~~ea~N~lE~~i~~~~~~l~~--~~~~~~~~e~~~i~~~l~~~~~wl~~~~~~~~~~~~~~~~~L~~~~~~i~~r~~ 633 (668)
+|++.+++|.||+|||.++..|.+ +...++++++++|...|+++++||+++..++.++|+.++++|++.+.+|+.++|
T Consensus 13 ~re~iEarN~aEsliy~~e~~L~e~~~~dkl~~eek~~I~~~i~el~~~L~~~~~ad~e~ik~k~~eL~~~~~~i~~k~y 92 (120)
T 2p32_A 13 GLVPRGSHMGLESYAFNLKQTIEDEKLKDKISPEDKKKIEDKCDEILKWLDSNQTAEKEEFEHQQKDLEGLANPIISKLY 92 (120)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHTCTTTGGGSCHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhchhhhccCCHHHHHHHHHHHHHHHHHHHcCCcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456789999999999999999986 889999999999999999999999876667899999999999999999999999
Q ss_pred HHHHhcc
Q psy3918 634 KKMAAEK 640 (668)
Q Consensus 634 ~~~~~~~ 640 (668)
+..++++
T Consensus 93 ~~~~~~~ 99 (120)
T 2p32_A 93 QSAGGAP 99 (120)
T ss_dssp CC-----
T ss_pred HhccCCC
Confidence 6443333
No 29
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=99.26 E-value=7.3e-13 Score=143.27 Aligned_cols=170 Identities=17% Similarity=0.174 Sum_probs=68.9
Q ss_pred CcEEEeeCCCCCHHHHHHHHHHH-HHcCCC--------------------------CCeEEEEe---------ccCCCcc
Q psy3918 192 KNAVITVPAYFNDSQRQATKDAG-QIAGLN--------------------------KGVFEVKS---------TNGDTLL 235 (668)
Q Consensus 192 ~~~VITVPa~f~~~qR~a~~~Aa-~~AGl~--------------------------~g~~~V~~---------~~gd~~l 235 (668)
..++||+|++++..+|+++.+++ +.+|++ +|+..|.. ......+
T Consensus 105 ~~vllt~p~~~~~~~r~~~~e~~fe~~~~~~~~~~~~~~~a~~a~g~~~~lVVDiG~g~T~v~pv~~G~~~~~~~~~~~~ 184 (394)
T 1k8k_B 105 CKILLTEPPMNPTKNREKIVEVMFETYQFSGVYVAIQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFSLPHLTRRLDI 184 (394)
T ss_dssp -------------------------------------------------CCEEEECSSCEEEECEETTEECSTTCEEESC
T ss_pred CcEEEEECCCCCHHHHHHHHHHhhhccCCCeEEEEhhHHHHHHhCCCceEEEEEcCCCceEeeeeECCEEcccceEEeec
Confidence 35999999999999999888854 666766 22333221 1123347
Q ss_pred cccccCccccHHHHHH--------HHHHHHHHHHHhCCCcc----------------eeeecccccccCCCCcceEEEee
Q psy3918 236 GGEGLDIRKDQMAMQR--------LKEAAEKAKIELSSSVQ----------------TDINLPYLTMDAGGPKHMNLKLT 291 (668)
Q Consensus 236 GG~~iD~~~~~~~~~r--------L~~~aE~~K~~LS~~~~----------------~~i~i~~l~~~~~~~~~~~~~iT 291 (668)
||+++|.........+ -...+|.+|+.++.-.. ..+.+| ....++|+
T Consensus 185 GG~~lt~~l~~~l~~~~~~~~~~~~~~~ae~iK~~~~~v~~d~~~~~~~~~~~~~~~~~~~lp---------dg~~i~i~ 255 (394)
T 1k8k_B 185 AGRDITRYLIKLLLLRGYAFNHSADFETVRMIKEKLCYVGYNIEQEQKLALETTVLVESYTLP---------DGRIIKVG 255 (394)
T ss_dssp CHHHHHHHHHHHHHHTTCCCCTTTTHHHHHHHHHHHCCCCSSHHHHHHHHHHCSTTCEEEECT---------TSCEEEEC
T ss_pred cHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhheeEecCHHHHHHhhccCCcCceEEECC---------CCCEEEEC
Confidence 8877664322211111 12568888888764321 111121 12357888
Q ss_pred HHHH---HHHHHHH-----HHHHHHHHHHHHHHcCCC--CCCCceEEEecCccCcHHHHHHHHHHhCC------------
Q psy3918 292 RSKF---ESLVGDL-----IKKTVNPCQKALQDADCK--NSDIGEVLLVGGMTRMPKVQSTVQEIFGK------------ 349 (668)
Q Consensus 292 r~ef---e~l~~~l-----~~~i~~~i~~~L~~a~~~--~~~I~~ViLVGGssriP~V~~~l~~~Fg~------------ 349 (668)
++.| |-|++|- ...+.+.|.++|...... ....+.|+|+||+|.+|.+.++|++.++.
T Consensus 256 ~erf~~~E~Lf~p~~~~~~~~~i~~~i~~~i~~~~~d~r~~l~~nIvLtGG~s~~~G~~~rl~~el~~~~~~~~~~~~~~ 335 (394)
T 1k8k_B 256 GERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSRLERELKQLYLERVLKGDVE 335 (394)
T ss_dssp THHHHTGGGGTCGGGGTCCSCCHHHHHHHHHHHSCTTTHHHHHTTCEEESGGGCSTTHHHHHHHHHHHHHHHHTCSSCCC
T ss_pred chhhcChHhhCCchhccCCCCCHHHHHHHHHHhCCHHHHHHHHhCEEEeCcccccccHHHHHHHHHHHHHhhhhcccccC
Confidence 8887 4444542 234677778888776432 23457899999999999999999987742
Q ss_pred -C----C--CCCCCchhHHHhhHHHhhh
Q psy3918 350 -V----P--SRAVNPDEAVAIGAAVQGG 370 (668)
Q Consensus 350 -~----~--~~~~npdeaVA~GAai~aa 370 (668)
+ + ..+.+|..++.+||+++|.
T Consensus 336 ~p~~~~v~v~~~~~~~~~~w~Ggsilas 363 (394)
T 1k8k_B 336 KLSKFKIRIEDPPRRKHMVFLGGAVLAD 363 (394)
T ss_dssp TTCCCCC---------------------
T ss_pred CCCceEEEEecCCCcceeEEhhhHHhhC
Confidence 1 1 2245677899999999886
No 30
>1ud0_A HSC70, 70 kDa heat-shock-like protein; chaperone; 3.45A {Rattus norvegicus} SCOP: a.8.4.1
Probab=99.19 E-value=4.4e-12 Score=112.07 Aligned_cols=88 Identities=13% Similarity=0.255 Sum_probs=72.3
Q ss_pred HHHHHHHHHHHHHHHHHHHH--HHHccCCHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy3918 559 RVEALNQAESIVHDTESKME--EFKAQLPAEECAKLKEQIAELQKLIANKDSVDPEELRKATTTLQQASLKLFEMAYKKM 636 (668)
Q Consensus 559 ~~ea~N~lE~~i~~~~~~l~--~~~~~~~~~e~~~i~~~l~~~~~wl~~~~~~~~~~~~~~~~~L~~~~~~i~~r~~~~~ 636 (668)
+.+++|.||+|||.++..|. ++...++++++++|...|+++++||+++..++.++|++++++|++.+.+|+.++|+..
T Consensus 2 l~EarN~aE~~iy~~e~~L~~~e~~~kl~~~ek~~i~~~i~~l~~~L~~~~~ad~~~i~~~~~~L~~~~~~i~~~~~~~~ 81 (113)
T 1ud0_A 2 VPRGSHMLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIISWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQSA 81 (113)
T ss_dssp --CCHHHHHHHHHHHHHHHTSGGGTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS
T ss_pred hHHHHHHHHHHHHHHHHHhcchhhhccCCHHHHHHHHHHHHHHHHHHHcCCccCHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 46789999999999999997 6889999999999999999999999854445788999999999999999999999654
Q ss_pred HhcccCCCCC
Q psy3918 637 AAEKESSSGS 646 (668)
Q Consensus 637 ~~~~~~~~~~ 646 (668)
++.+++++|+
T Consensus 82 ~~~~~~~~~~ 91 (113)
T 1ud0_A 82 GGMPGGMPGG 91 (113)
T ss_dssp CCCCCC----
T ss_pred cCCCCCCCCC
Confidence 4444443333
No 31
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=98.47 E-value=8.8e-07 Score=93.92 Aligned_cols=74 Identities=15% Similarity=0.257 Sum_probs=59.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCceEEEecCccCcHH--HHHHHHHHhCCCCCCCCCchhHHHhhHHHhhh
Q psy3918 293 SKFESLVGDLIKKTVNPCQKALQDADCKNSDIGEVLLVGGMTRMPK--VQSTVQEIFGKVPSRAVNPDEAVAIGAAVQGG 370 (668)
Q Consensus 293 ~efe~l~~~l~~~i~~~i~~~L~~a~~~~~~I~~ViLVGGssriP~--V~~~l~~~Fg~~~~~~~npdeaVA~GAai~aa 370 (668)
+.+++.++++++++.+.|++.+.+ ++.++.|+|+||++.++. +++.+++.|+.. .||..|+|+|+..++.
T Consensus 264 ~~i~~a~~~~~~~I~~~i~~~l~~----~~~~~~Ivl~GGGa~l~~~~l~~~i~~~~~~~----~~p~~anA~G~~~~~~ 335 (355)
T 3js6_A 264 DEFYKEQDSLIEEVMSNFEITVGN----INSIDRIIVTGGGANIHFDSLSHYYSDVFEKA----DDSQFSNVRGYEKLGE 335 (355)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCC----TTSCSEEEEESTTHHHHHHHHHHHSSSCEECC----SSGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhc----hhhccEEEEECcchhcchhhHHHHHHHHCCCC----CCcHHHHHHHHHHHHH
Confidence 345666777777777777777653 466899999999999998 889999888543 8999999999999988
Q ss_pred hhcC
Q psy3918 371 VLAG 374 (668)
Q Consensus 371 ~ls~ 374 (668)
.+.+
T Consensus 336 ~~~~ 339 (355)
T 3js6_A 336 LLKN 339 (355)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 7654
No 32
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=98.36 E-value=2.4e-07 Score=97.28 Aligned_cols=77 Identities=10% Similarity=0.183 Sum_probs=61.0
Q ss_pred eeHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCceEEEecCccCcHHHHHHHHHHhCCCCCCCCCchhHHHhhHHHhh
Q psy3918 290 LTRSKFESLVGDLIKKTVNPCQKALQDADCKNSDIGEVLLVGGMTRMPKVQSTVQEIFGKVPSRAVNPDEAVAIGAAVQG 369 (668)
Q Consensus 290 iTr~efe~l~~~l~~~i~~~i~~~L~~a~~~~~~I~~ViLVGGssriP~V~~~l~~~Fg~~~~~~~npdeaVA~GAai~a 369 (668)
++.+++++.++++++++.+.+++. +..++.++.|+|+||++.+ +.+.|++.|+.+.....||..|+|+|+..++
T Consensus 249 ~~~~~i~~~~~e~~~~I~~~i~~~----~~~~~~~~~IvltGGGA~l--~~~~l~~~~~~~v~v~~~P~~a~a~G~~~~~ 322 (329)
T 4apw_A 249 ESSTVIKKVKEKFLKDAIKLIEKR----GFKLDQLDSLIFIGGTTQK--LKEQISKTYPNNSIITNNSQWTTCEGLYKVA 322 (329)
T ss_dssp STTHHHHHHHHHHHHHHHHHHHHH----TCCTTSCSEEEEESTTHHH--HHHHHHHHSTTCEECCSSGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHc----CCCHHHccEEEEECChHHH--HHHHHHHHcCCCCEecCCChhhHHHHHHHHH
Confidence 445677777777777777766655 3455668999999999998 5699999998767778899999999999887
Q ss_pred hhh
Q psy3918 370 GVL 372 (668)
Q Consensus 370 a~l 372 (668)
...
T Consensus 323 ~~k 325 (329)
T 4apw_A 323 VAK 325 (329)
T ss_dssp HHH
T ss_pred hhh
Confidence 654
No 33
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=98.20 E-value=4.3e-06 Score=91.94 Aligned_cols=65 Identities=11% Similarity=0.181 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHcCCCC--CCCceEEEecCccCcHHHHHHHHHHh----CC---CCCCC---CCchhHHHhhHHHhhh
Q psy3918 306 TVNPCQKALQDADCKN--SDIGEVLLVGGMTRMPKVQSTVQEIF----GK---VPSRA---VNPDEAVAIGAAVQGG 370 (668)
Q Consensus 306 i~~~i~~~L~~a~~~~--~~I~~ViLVGGssriP~V~~~l~~~F----g~---~~~~~---~npdeaVA~GAai~aa 370 (668)
+-+++.+.|.++..+. .-...|+|+||+|.+|.+.++|++-+ +. ++..+ .++..++=+|++++|.
T Consensus 394 i~e~i~~sI~~cd~d~r~~L~~nIvLsGGst~~pGf~~Rl~~El~~l~p~~~i~v~~~~~~~er~~s~WiGgsilas 470 (498)
T 3qb0_A 394 LADLVYSSIMSSDVDLRATLAHNVVLTGGTSSIPGLSDRLMTELNKILPSLKFRILTTGHTIERQYQSWLGGSILTS 470 (498)
T ss_dssp HHHHHHHHHHTSCTTTHHHHHTTEEEESGGGGSTTHHHHHHHHHHHHSTTSCCCEECCSCTGGGGSHHHHHHHHHHT
T ss_pred chHHHHHHHHhCCHHHHHHHhcCEEEeCCccCchhHHHHHHHHHHHhCCCCeeEEEcCCCCCccCccEEcccEEEec
Confidence 4455666665543321 12368999999999999999998765 21 11222 4556788899999885
No 34
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=98.12 E-value=1.3e-06 Score=94.85 Aligned_cols=198 Identities=12% Similarity=0.073 Sum_probs=107.1
Q ss_pred hHHHHHHHHHHHHHHHhhcCC--CCcEEEeeCCCCCHHHHHHHHHHH-HHcCCC--------------CC----------
Q psy3918 170 QIGAFVLMKMKETSEAFLNTS--VKNAVITVPAYFNDSQRQATKDAG-QIAGLN--------------KG---------- 222 (668)
Q Consensus 170 ev~a~iL~~lk~~ae~~l~~~--~~~~VITVPa~f~~~qR~a~~~Aa-~~AGl~--------------~g---------- 222 (668)
+....+++|+.. +.++.. -..++||.|.......|+.+.+.+ +.+|++ .|
T Consensus 103 d~~e~iw~~~~~---~~L~v~~~~~pvlltep~~~~~~~re~~~ei~FE~~~~p~v~l~~~~vla~~a~G~~~~~~~~~~ 179 (427)
T 3dwl_A 103 DHMERFWQQSLF---KYLRCEPEDHYFLLTEPPLNPPENRENTAEIMFESFNCAGLYIAVQAVLALAASWTSSKVTDRSL 179 (427)
T ss_dssp HHHHHHHHHHHH---TTSCCCGGGCEEEEEECTTCCHHHHHHHHHHHTTTTCCSEEEEEEHHHHHHHGGGGSTTTCSCCC
T ss_pred HHHHHHHHHHHh---HhhCCCCcCCcEEEEcCCCCCHHHHHHHHHHHHHhccCceeeecchHHHHHHhcCCcccccCCCc
Confidence 444555555442 233322 246999999999999999888776 555555 11
Q ss_pred eEEEEeccCCC-------------------cccccccCccccHHH-----HHHHHHHHHHHHHHhCCCcce---ee----
Q psy3918 223 VFEVKSTNGDT-------------------LLGGEGLDIRKDQMA-----MQRLKEAAEKAKIELSSSVQT---DI---- 271 (668)
Q Consensus 223 ~~~V~~~~gd~-------------------~lGG~~iD~~~~~~~-----~~rL~~~aE~~K~~LS~~~~~---~i---- 271 (668)
+--|++.+++. .+||++++....... ...=.+.+|.+|+.++.-... ++
T Consensus 180 tglVVDiG~g~T~v~PV~~G~~l~~~~~rl~~gG~~lt~~L~~lL~~~~~~~~~~~~~~~IKe~~cyv~~d~~~e~~~~~ 259 (427)
T 3dwl_A 180 TGTVVDSGDGVTHIIPVAEGYVIGSSIKTMPLAGRDVTYFVQSLLRDRNEPDSSLKTAERIKEECCYVCPDIVKEFSRFD 259 (427)
T ss_dssp CEEEEEESSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHHTTC--------CHHHHHHHHHHCCCCSCHHHHHHHTT
T ss_pred eEEEEECCCCceEEEEEECCEEehhhheeccccHHHHHHHHHHHHHHcCCCchhHHHHHHHHHhcCcccCCHHHHHHHhh
Confidence 12233333221 256665542110000 000124578888887643210 00
Q ss_pred ----ecccccccCCCCcceEEEeeHHHH---HHHHHHH------HHHHHHHHHHHHHHcCCC--CCCCceEEEecCccCc
Q psy3918 272 ----NLPYLTMDAGGPKHMNLKLTRSKF---ESLVGDL------IKKTVNPCQKALQDADCK--NSDIGEVLLVGGMTRM 336 (668)
Q Consensus 272 ----~i~~l~~~~~~~~~~~~~iTr~ef---e~l~~~l------~~~i~~~i~~~L~~a~~~--~~~I~~ViLVGGssri 336 (668)
.+.....+...+....++|..+.| |-|++|- ...+.++|.+.|.+...+ ..-...|+|+||+|.+
T Consensus 260 ~~~~~~~~~~l~~~~g~~~~i~ig~erf~~pE~LF~P~~~g~~~~~gI~~~i~~sI~~c~~dlr~~L~~nIvLtGG~sl~ 339 (427)
T 3dwl_A 260 REPDRYLKYASESITGHSTTIDVGFERFLAPEIFFNPEIASSDFLTPLPELVDNVVQSSPIDVRKGLYKNIVLSGGSTLF 339 (427)
T ss_dssp C-----CCBCC---------CBCCTHHHHSGGGGTCGGGTCSSCCSCHHHHHHHHHHTSCHHHHHHHHHCEEEESGGGCS
T ss_pred cCccccceeEeeCCCCCeeEEEEChHhhhChhhccCchhcCCccCCCccHHHHHHHHhCCHHHHHHHhCCEEEEccCcCC
Confidence 011100000001223567777776 4555551 234677777777765421 1223679999999999
Q ss_pred HHHHHHHHHHhC----C------------------CCCCCCCchhHHHhhHHHhhh
Q psy3918 337 PKVQSTVQEIFG----K------------------VPSRAVNPDEAVAIGAAVQGG 370 (668)
Q Consensus 337 P~V~~~l~~~Fg----~------------------~~~~~~npdeaVA~GAai~aa 370 (668)
|.+.++|++.+. . ++..+.++..++=+|++++|.
T Consensus 340 ~G~~~RL~~El~~l~~~~~~~~~~~~~~~p~~~~vkv~~~~~r~~s~WiGGSilas 395 (427)
T 3dwl_A 340 KNFGNRLQRDLKRIVDERIHRSEMLSGAKSGGVDVNVISHKRQRNAVWFGGSLLAQ 395 (427)
T ss_dssp TTTTHHHHHHHHHHHTTC-------------CCCCCEECCTTCTTHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHhhhhhccccccccccCCCceeEEEecCCccccceecCceeecc
Confidence 999999987551 0 112335667899999999986
No 35
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=97.82 E-value=0.00017 Score=81.84 Aligned_cols=48 Identities=23% Similarity=0.229 Sum_probs=36.6
Q ss_pred CceEEEecCccCcHHHHHHHHHHhCC-------------CCC---CCCCchhHHHhhHHHhhhh
Q psy3918 324 IGEVLLVGGMTRMPKVQSTVQEIFGK-------------VPS---RAVNPDEAVAIGAAVQGGV 371 (668)
Q Consensus 324 I~~ViLVGGssriP~V~~~l~~~Fg~-------------~~~---~~~npdeaVA~GAai~aa~ 371 (668)
...|+|+||+|.+|.+.++|++.+.. .+. +..+|..++=+||+++|..
T Consensus 501 ~~NIvltGG~s~~pGf~~RL~~eL~~~~p~~~~~~~~~v~v~~~p~~~d~~~~aW~GgSilasL 564 (593)
T 4fo0_A 501 YSSILVVGGGLMFHKAQEFLQHRILNKMPPSFRRIIENVDVITRPKDMDPRLIAWKGGAVLACL 564 (593)
T ss_dssp HHEEEEESSTTCCBTHHHHHHHHHHHHSCHHHHHHSSCCEEESSGGGCCTTTHHHHHHHHHHHC
T ss_pred hCCEEEEchhhchhcHHHHHHHHHHHhCcchhccccceEEEECCCCCCCCceeeehhhHHHhcC
Confidence 46899999999999999999876511 111 2347788888999999864
No 36
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=96.55 E-value=0.0042 Score=62.88 Aligned_cols=73 Identities=14% Similarity=0.169 Sum_probs=53.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCCCCceEEEecCccCcHHHHHHHHHHhCCCCCCCCCchhHHHhhHHHhhhhh
Q psy3918 296 ESLVGDLIKKTVNPCQKALQDADCKNSDIGEVLLVGGMTRMPKVQSTVQEIFGKVPSRAVNPDEAVAIGAAVQGGVL 372 (668)
Q Consensus 296 e~l~~~l~~~i~~~i~~~L~~a~~~~~~I~~ViLVGGssriP~V~~~l~~~Fg~~~~~~~npdeaVA~GAai~aa~l 372 (668)
++++..+++.+..-+.+.++..++ .+.|+++||.++.|.+++.+.+.++.++..+.+|+.+.|+|||++|...
T Consensus 185 ~di~~av~e~Va~~i~~~~~~~~~----~~~i~~~GG~a~n~~~~~~~~~~lg~~v~~p~~~~~~~AlGAAl~A~~~ 257 (270)
T 1hux_A 185 IDIIAGIHRSVASRVIGLANRVGI----VKDVVMTGGVAQNYGVRGALEEGLGVEIKTSPLAQYNGALGAALYAYKK 257 (270)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCC----CSSEEEESGGGGCHHHHHHHHHHHCSCEECCGGGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCC----CCeEEEeCccccCHHHHHHHHHHHCCCeEeCCCcchHhHHHHHHHHHHh
Confidence 334444444444444444443221 3789999999999999999999999988777788889999999998754
No 37
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=95.94 E-value=0.012 Score=65.85 Aligned_cols=85 Identities=19% Similarity=0.199 Sum_probs=59.1
Q ss_pred EeeHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCceEEEecCccCcHHHHHHHHHHhCCCCCCCCCchhHHHhhHHHh
Q psy3918 289 KLTRSKFESLVGDLIKKTVNPCQKALQDADCKNSDIGEVLLVGGMTRMPKVQSTVQEIFGKVPSRAVNPDEAVAIGAAVQ 368 (668)
Q Consensus 289 ~iTr~efe~l~~~l~~~i~~~i~~~L~~a~~~~~~I~~ViLVGGssriP~V~~~l~~~Fg~~~~~~~npdeaVA~GAai~ 368 (668)
.-||.++-.++.-+++.+.-.++.+++...-....++.|.++||.++.|.+.+++.+.||.++... ...|+.|+|||+.
T Consensus 408 ~~~~~~l~r~~rAvlEgia~~~r~~~e~l~~~g~~~~~i~~~GG~aks~~~~Qi~ADv~g~pV~~~-~~~e~~alGAA~l 486 (554)
T 3l0q_A 408 STTPEDMALRYLATIQALALGTRHIIETMNQNGYNIDTMMASGGGTKNPIFVQEHANATGCAMLLP-EESEAMLLGSAMM 486 (554)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCEEEEESGGGGCHHHHHHHHHHHCCEEEEE-SCSCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCccccCHHHHHHHHHhhCCeEEec-CCCcchHHHHHHH
Confidence 346777743344555544444443333221122357899999999999999999999999887543 4567999999999
Q ss_pred hhhhcC
Q psy3918 369 GGVLAG 374 (668)
Q Consensus 369 aa~ls~ 374 (668)
|+.-.+
T Consensus 487 A~~a~G 492 (554)
T 3l0q_A 487 GTVAAG 492 (554)
T ss_dssp HHHHTT
T ss_pred HHHHcC
Confidence 987655
No 38
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=95.93 E-value=0.011 Score=65.43 Aligned_cols=76 Identities=11% Similarity=0.017 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCCCceEEEecCccCcHHHHHHHHHHhCCCCCCCCCchhHHHhhHHHhhhhhcCC
Q psy3918 298 LVGDLIKKTVNPCQKALQDADCKNSDIGEVLLVGGMTRMPKVQSTVQEIFGKVPSRAVNPDEAVAIGAAVQGGVLAGD 375 (668)
Q Consensus 298 l~~~l~~~i~~~i~~~L~~a~~~~~~I~~ViLVGGssriP~V~~~l~~~Fg~~~~~~~npdeaVA~GAai~aa~ls~~ 375 (668)
++.-+++.+.-.++.+++...- .. ++.|.++||.++.|.+.+++.+.||.++.....+.|+.|+|||+.|+.-.+.
T Consensus 379 l~RAvlEgia~~~~~~~~~l~~-g~-~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~~~~~e~~alGaA~lA~~a~G~ 454 (511)
T 3hz6_A 379 ILLAVLEGAALSLRWCAELLGM-EK-VGLLKVVGGGARSEAWLRMIADNLNVSLLVKPDAHLHPLRGLAALAAVELEW 454 (511)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTG-GG-CCEEEEESGGGGCHHHHHHHHHHHTCEEEECCCGGGHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHhc-CC-CCEEEEeCchhcCHHHHHHHHHHHCCeeEEecCCCCchHHHHHHHHHHHhCC
Confidence 3444555544444444443322 23 7899999999999999999999999987233468999999999999876553
No 39
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=95.93 E-value=0.0095 Score=65.54 Aligned_cols=77 Identities=18% Similarity=0.180 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCCCceEEEecCccCcHHHHHHHHHHhCCCCCCCCCchhHHHhhHHHhhhhhcC
Q psy3918 298 LVGDLIKKTVNPCQKALQDADCKNSDIGEVLLVGGMTRMPKVQSTVQEIFGKVPSRAVNPDEAVAIGAAVQGGVLAG 374 (668)
Q Consensus 298 l~~~l~~~i~~~i~~~L~~a~~~~~~I~~ViLVGGssriP~V~~~l~~~Fg~~~~~~~npdeaVA~GAai~aa~ls~ 374 (668)
++.-+++.+.-.++.+++...-....++.|.++||.++.|.+.+++.+.||.++.....++.+.|+|||+.|+.-.+
T Consensus 361 ~~rAvlEgia~~~~~~~~~l~~~g~~~~~i~~~GG~a~s~~~~Qi~Adv~g~pV~~~~~~e~~~alGAA~lA~~~~g 437 (484)
T 2itm_A 361 LARAVLEGVGYALADGMDVVHACGIKPQSVTLIGGGARSEYWRQMLADISGQQLDYRTGGDVGPALGAARLAQIAAN 437 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTCCCSCEEEESGGGCCHHHHHHHHHHHCCCEEEESCTTSCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEEeccccCHHHHHHHHHHhCCeEEeCCCCCcccHHHHHHHHHHHcC
Confidence 34444444444344333332212235688999999999999999999999998766555554689999999986554
No 40
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=95.91 E-value=0.014 Score=65.01 Aligned_cols=77 Identities=12% Similarity=0.156 Sum_probs=60.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCCCCceEEEecCccCcHHHHHHHHHHhCCCCCCCCCchhHHHhhHHHhhhhhc
Q psy3918 296 ESLVGDLIKKTVNPCQKALQDADCKNSDIGEVLLVGGMTRMPKVQSTVQEIFGKVPSRAVNPDEAVAIGAAVQGGVLA 373 (668)
Q Consensus 296 e~l~~~l~~~i~~~i~~~L~~a~~~~~~I~~ViLVGGssriP~V~~~l~~~Fg~~~~~~~npdeaVA~GAai~aa~ls 373 (668)
..++.-+++.+.-.++.+++..+.....++.|.++||.++.|.+.+++.+.||.++.. ..+.|+.|+|||+.|+.-.
T Consensus 407 ~~l~RAvlEgia~~~r~~~~~l~~~g~~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~-~~~~e~~alGaA~lA~~a~ 483 (538)
T 4bc3_A 407 DVEVRALIEGQFMAKRIHAEGLGYRVMSKTKILATGGASHNREILQVLADVFDAPVYV-IDTANSACVGSAYRAFHGL 483 (538)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCCTTCCEEEEEGGGGCHHHHHHHHHHHTSCEEE-CCCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCCCeEEEEcchhcCHHHHHHHHHHhCCceEe-cCCCCchHHHHHHHHHHHh
Confidence 5556666666666666666665554456789999999999999999999999988754 3567899999999997543
No 41
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=95.81 E-value=0.014 Score=64.45 Aligned_cols=76 Identities=18% Similarity=0.212 Sum_probs=56.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCCCceEEEecCccCcHHHHHHHHHHhCCCCCCCCCchhHHHhhHHHhhhhhcC
Q psy3918 297 SLVGDLIKKTVNPCQKALQDADCKNSDIGEVLLVGGMTRMPKVQSTVQEIFGKVPSRAVNPDEAVAIGAAVQGGVLAG 374 (668)
Q Consensus 297 ~l~~~l~~~i~~~i~~~L~~a~~~~~~I~~ViLVGGssriP~V~~~l~~~Fg~~~~~~~npdeaVA~GAai~aa~ls~ 374 (668)
+++.-+++.+.-.++.+++...-.. .++.|.++||.++.|.+.+++.+.||.++... .+.|+.|+|||+.|+.-.+
T Consensus 368 ~l~rAvlEgia~~~~~~l~~l~~~~-~~~~i~~~GG~a~s~~~~Qi~Adv~g~pV~~~-~~~e~~alGaA~lA~~~~g 443 (497)
T 2zf5_O 368 HLARATLEAIAYLTRDVVDEMEKLV-QIKELRVDGGATANDFLMQFQADILNRKVIRP-VVKETTALGAAYLAGLAVD 443 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTS-CCCCEEEESGGGGCHHHHHHHHHHHTSCEEEE-SCSCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcC-CcceEEEeCccccCHHHHHHHHhhcCCeEEEc-CCCcchHHHHHHHHHHHhC
Confidence 3445555555555555555443333 57899999999999999999999999887543 4456999999999986555
No 42
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=95.81 E-value=0.014 Score=64.61 Aligned_cols=77 Identities=12% Similarity=0.080 Sum_probs=53.8
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCCCceEEEecCccCcHHHHHHHHHHhCCCCCCCCCchhHHHhhHHHhhhhhcCC
Q psy3918 298 LVGDLIKKTVNPCQKALQDADCKNSDIGEVLLVGGMTRMPKVQSTVQEIFGKVPSRAVNPDEAVAIGAAVQGGVLAGD 375 (668)
Q Consensus 298 l~~~l~~~i~~~i~~~L~~a~~~~~~I~~ViLVGGssriP~V~~~l~~~Fg~~~~~~~npdeaVA~GAai~aa~ls~~ 375 (668)
++.-+++.+.-.++.+++...-....++.|.++||.++.|.+.+++.+.||.++.. ..+.|+.|+|||+.|+.-.+.
T Consensus 368 l~RAvlEgia~~~r~~~~~l~~~g~~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~-~~~~e~~alGaA~lA~~a~G~ 444 (504)
T 3ll3_A 368 MARAVIEGIIFNLYDAASNLIKNTKKPVAINATGGFLKSDFVRQLCANIFNVPIVT-MKEQQSGTLAAMFLARQALGL 444 (504)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSCCCSEEEEESGGGCSHHHHHHHHHHHTSCEEE-ESCSCHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCchhcCHHHHHHHHHhhCCeEEe-cCCCCchhHHHHHHHHHHcCc
Confidence 34444444443333333322111235789999999999999999999999988754 346679999999999876553
No 43
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=95.68 E-value=0.0041 Score=67.78 Aligned_cols=79 Identities=20% Similarity=0.263 Sum_probs=55.9
Q ss_pred EeeHHH--HHHHHHHHHHHHHHH--HHHHHHHcCCC-----CCCCceEEEecCccCcHHHHHHHHHHhCC-CC-------
Q psy3918 289 KLTRSK--FESLVGDLIKKTVNP--CQKALQDADCK-----NSDIGEVLLVGGMTRMPKVQSTVQEIFGK-VP------- 351 (668)
Q Consensus 289 ~iTr~e--fe~l~~~l~~~i~~~--i~~~L~~a~~~-----~~~I~~ViLVGGssriP~V~~~l~~~Fg~-~~------- 351 (668)
.| +.. +|+ ++-+-+++.+. ++++|+..+.. ..+|..|+|+||++.++.+.++.++.|+. .+
T Consensus 509 ~I-~~R~~vEE-lelVR~~ak~~vfv~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~gI~elA~~iL~~~~VRiGrP~~ 586 (607)
T 1nbw_A 509 PI-DNASPLEK-IRLVRRQAKEKVFVTNCLRALRQVSPGGSIRDIAFVVLVGGSSLDFEIPQLITEALSHYGVVAGQGNI 586 (607)
T ss_dssp EE-CCSSCHHH-HHHHHHHHHHHHHHHHHHHHHSSSSTTCCSTTCCEEEEESGGGGSSSHHHHHHHHHHTTTCEEEECCG
T ss_pred ee-CCCcchHH-HHHHHHHHhhhhhhHHHHHhcCCcccCCcccccCCEEEeCchhhcccHHHHHHHHhCcCCeEEecCCc
Confidence 44 455 555 44444443332 44457776653 35679999999999999999999999976 32
Q ss_pred CCCCCchhHHHhhHHHhh
Q psy3918 352 SRAVNPDEAVAIGAAVQG 369 (668)
Q Consensus 352 ~~~~npdeaVA~GAai~a 369 (668)
...-.|..|+|.|.+++-
T Consensus 587 ~g~~gP~fAtAvGLlly~ 604 (607)
T 1nbw_A 587 RGTEGPRNAVATGLLLAG 604 (607)
T ss_dssp GGTSCSCCHHHHHHHHHH
T ss_pred cccCCchHHHHHHHHHhh
Confidence 224579999999999864
No 44
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=95.57 E-value=0.013 Score=65.00 Aligned_cols=51 Identities=33% Similarity=0.470 Sum_probs=43.8
Q ss_pred CCceEEEecCccCcHHHHHHHHHHhCCCCCCCCCchhHHHhhHHHhhhhhcC
Q psy3918 323 DIGEVLLVGGMTRMPKVQSTVQEIFGKVPSRAVNPDEAVAIGAAVQGGVLAG 374 (668)
Q Consensus 323 ~I~~ViLVGGssriP~V~~~l~~~Fg~~~~~~~npdeaVA~GAai~aa~ls~ 374 (668)
.++.|.++||.++.|.+.+++.+.||.++.. ..+.|+.|+|||+.|+.-.+
T Consensus 424 ~~~~i~~~GGgaks~~~~Qi~ADvlg~pV~~-~~~~e~~alGAA~lA~~a~G 474 (515)
T 3i8b_A 424 SITRILLIGGGAKSEAIRTLAPSILGMDVTR-PATDEYVAIGAARQAAWVLS 474 (515)
T ss_dssp CCCEEEEESGGGGCHHHHHHHHHHHTSCEEE-ECCCCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECchhcCHHHHHHHHHHhCCceEe-cCCcccHHHHHHHHHHHHcC
Confidence 4789999999999999999999999988754 34567999999999986554
No 45
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=95.51 E-value=0.0037 Score=67.86 Aligned_cols=80 Identities=24% Similarity=0.245 Sum_probs=54.9
Q ss_pred EeeHHH--HHHHHHHHHHHHHHH--HHHHHHHcCC-----CCCCCceEEEecCccCcHHHHHHHHHHhCC-CC-------
Q psy3918 289 KLTRSK--FESLVGDLIKKTVNP--CQKALQDADC-----KNSDIGEVLLVGGMTRMPKVQSTVQEIFGK-VP------- 351 (668)
Q Consensus 289 ~iTr~e--fe~l~~~l~~~i~~~--i~~~L~~a~~-----~~~~I~~ViLVGGssriP~V~~~l~~~Fg~-~~------- 351 (668)
.| +.. +|+ ++-+-+++.+. ++++|+..+. ...+|..|+|+||++.++.+.++.++.|+. .+
T Consensus 507 ~I-~pR~~vEE-lelVR~~ak~~vfv~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~GI~ElA~~iL~~y~VRiGrP~~ 584 (610)
T 2d0o_A 507 PL-PGDLALEK-VRAIRRSAKERVFVTNALRALRQVSPTGNIRDIPFVVLVGGSSLDFEVPQLVTDALAHYRLVAGRGNI 584 (610)
T ss_dssp EC-CTTCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHSSSSCGGGCCEEEEESGGGGCSSHHHHHHHHTTTSSCEEEECCG
T ss_pred ee-CCCcchHH-HHHHHHHHhhhhhhHHHHHhcCCccCCCcccccCCEEEeCchhhcccHHHHHHHHhCcCCeEEecCCc
Confidence 44 455 555 44444443332 2333554432 235679999999999999999999999987 32
Q ss_pred CCCCCchhHHHhhHHHhhh
Q psy3918 352 SRAVNPDEAVAIGAAVQGG 370 (668)
Q Consensus 352 ~~~~npdeaVA~GAai~aa 370 (668)
...-.|..|+|.|.+++-+
T Consensus 585 ~gv~gP~fAtAvGLlly~~ 603 (610)
T 2d0o_A 585 RGSEGPRNAVATGLILSWH 603 (610)
T ss_dssp GGTSTTSCHHHHHHHHHHH
T ss_pred cccCCCcHHHHHHHHHHHh
Confidence 2245799999999998754
No 46
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=95.44 E-value=0.025 Score=62.88 Aligned_cols=67 Identities=21% Similarity=0.251 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHHcCCCCCCCceEEEecCccCcHHHHHHHHHHhCCCCCCCCCchhHHHhhHHHhhhhhcCC
Q psy3918 305 KTVNPCQKALQDADCKNSDIGEVLLVGGMTRMPKVQSTVQEIFGKVPSRAVNPDEAVAIGAAVQGGVLAGD 375 (668)
Q Consensus 305 ~i~~~i~~~L~~a~~~~~~I~~ViLVGGssriP~V~~~l~~~Fg~~~~~~~npdeaVA~GAai~aa~ls~~ 375 (668)
.+...++..-+..+. .++.|.++||.++.|.+.+++.+.||.++... ...|+.|+|||+.|+.-.+.
T Consensus 387 ~~r~~le~l~~~~g~---~~~~i~v~GGgaks~~~~Qi~ADvlg~pV~~~-~~~E~~alGAA~lA~~a~G~ 453 (526)
T 3ezw_A 387 QTRDVLEAMQADSGI---RLHALRVDGGAVANNFLMQFQSDILGTRVERP-EVREVTALGAAYLAGLAVGF 453 (526)
T ss_dssp HHHHHHHHHHHHHCC---CCSEEEEESGGGGCHHHHHHHHHHHTSEEEEE-SCCCHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHhcCC---CCCEEEEECchhhCHHHHHHHHHHHCCEEEeC-CCCchHHHHHHHHHHHHhCC
Confidence 334444433334554 47899999999999999999999999887543 45679999999999876664
No 47
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=95.24 E-value=0.02 Score=63.20 Aligned_cols=52 Identities=23% Similarity=0.314 Sum_probs=44.5
Q ss_pred CCceEEEecCccCcHHHHHHHHHHhCCCCCCCCCchhHHHhhHHHhhhhhcCC
Q psy3918 323 DIGEVLLVGGMTRMPKVQSTVQEIFGKVPSRAVNPDEAVAIGAAVQGGVLAGD 375 (668)
Q Consensus 323 ~I~~ViLVGGssriP~V~~~l~~~Fg~~~~~~~npdeaVA~GAai~aa~ls~~ 375 (668)
.++.|.++||.++.|.+.+++.+.||.++.. ..+.|+.|+|||+.|+.-.+.
T Consensus 404 ~~~~i~~~GG~aks~~~~Qi~Adv~g~pV~~-~~~~e~~alGaA~la~~a~G~ 455 (501)
T 3g25_A 404 DVQSLRVDGGAVKNNFIMQFQADIVNTSVER-PEIQETTALGAAFLAGLAVGF 455 (501)
T ss_dssp CCSEEEEESGGGGCHHHHHHHHHHHTSEEEE-ESCCCHHHHHHHHHHHHHTTS
T ss_pred CCcEEEEecchhcCHHHHHHHHHHhCCceEe-cCCCcchHHHHHHHHHHHhCc
Confidence 4789999999999999999999999988744 346779999999999876553
No 48
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=95.18 E-value=0.015 Score=64.51 Aligned_cols=52 Identities=21% Similarity=0.186 Sum_probs=43.6
Q ss_pred CCceEEEecCccCcHHHHHHHHHHhCCCCCCCCCchhHHHhhHHHhhhhhcCC
Q psy3918 323 DIGEVLLVGGMTRMPKVQSTVQEIFGKVPSRAVNPDEAVAIGAAVQGGVLAGD 375 (668)
Q Consensus 323 ~I~~ViLVGGssriP~V~~~l~~~Fg~~~~~~~npdeaVA~GAai~aa~ls~~ 375 (668)
.++.|.++||.++.|.+.+++.+.||.++.. ..+.|+.|+|||+.|+.-.+.
T Consensus 425 ~~~~i~~~GGgaks~~~~Qi~ADvlg~pV~~-~~~~e~~alGAA~lA~~a~G~ 476 (520)
T 4e1j_A 425 NDTVLRVDGGMVASDWTMQRLSDLLDAPVDR-PVILETTALGVAWLAGSRAGV 476 (520)
T ss_dssp --CCEEEESGGGGCHHHHHHHHHHHTSCEEE-ESCCCHHHHHHHHHHHHHHTS
T ss_pred CcceEEEeCccccCHHHHHHHHHHhCCeEEe-cCCCccHHHHHHHHHHHHcCC
Confidence 4789999999999999999999999988754 346779999999999876653
No 49
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=95.14 E-value=0.019 Score=63.47 Aligned_cols=51 Identities=18% Similarity=0.150 Sum_probs=43.5
Q ss_pred CCceEEEecCccCcHHHHHHHHHHhCCCCCCCCCchhHHHhhHHHhhhhhcC
Q psy3918 323 DIGEVLLVGGMTRMPKVQSTVQEIFGKVPSRAVNPDEAVAIGAAVQGGVLAG 374 (668)
Q Consensus 323 ~I~~ViLVGGssriP~V~~~l~~~Fg~~~~~~~npdeaVA~GAai~aa~ls~ 374 (668)
.++.|.++||.++.|.+.+++.+.||.++..... .|+.|+|||+.|+.-.+
T Consensus 400 ~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~~~-~e~~alGaA~lA~~a~G 450 (508)
T 3ifr_A 400 APQRFFASDGGTRSRVWMGIMADVLQRPVQLLAN-PLGSAVGAAWVAAIGGG 450 (508)
T ss_dssp CCCEEEEESGGGGCHHHHHHHHHHHTSCEEEEEC-CSTHHHHHHHHHHHHTC
T ss_pred CCCEEEEeCCcccCHHHHHHHHHHhCCeEEecCC-CCchHHHHHHHHHHHhC
Confidence 4789999999999999999999999988755433 56899999999987655
No 50
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=95.13 E-value=0.021 Score=63.22 Aligned_cols=52 Identities=25% Similarity=0.262 Sum_probs=44.6
Q ss_pred CCceEEEecCccCcHHHHHHHHHHhCCCCCCCCCchhHHHhhHHHhhhhhcCC
Q psy3918 323 DIGEVLLVGGMTRMPKVQSTVQEIFGKVPSRAVNPDEAVAIGAAVQGGVLAGD 375 (668)
Q Consensus 323 ~I~~ViLVGGssriP~V~~~l~~~Fg~~~~~~~npdeaVA~GAai~aa~ls~~ 375 (668)
.++.|.++||.++.|.+.+++.+.||.++.. ..+.|+.|+|||+.|+.-.+.
T Consensus 403 ~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~-~~~~e~~alGaA~lA~~a~G~ 454 (506)
T 3h3n_X 403 DIPLLKVDGGAAKNDLLMQFQADILDIDVQR-AANLETTALGAAYLAGLAVGF 454 (506)
T ss_dssp CCCEEEEESGGGGCHHHHHHHHHHHTSEEEE-CSSSCHHHHHHHHHHHHHTTS
T ss_pred CCCEEEEecccccCHHHHHHHHHHhCCeEEe-cCCCcchhHHHHHHHHHHhCc
Confidence 4689999999999999999999999988754 456789999999999876553
No 51
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=95.12 E-value=0.021 Score=64.21 Aligned_cols=76 Identities=16% Similarity=0.255 Sum_probs=53.8
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCCCceEEEecCcc-CcHHHHHHHHHHhCCCCCCCCCchhHHHhhHHHhhhhhcC
Q psy3918 298 LVGDLIKKTVNPCQKALQDADCKNSDIGEVLLVGGMT-RMPKVQSTVQEIFGKVPSRAVNPDEAVAIGAAVQGGVLAG 374 (668)
Q Consensus 298 l~~~l~~~i~~~i~~~L~~a~~~~~~I~~ViLVGGss-riP~V~~~l~~~Fg~~~~~~~npdeaVA~GAai~aa~ls~ 374 (668)
++.-+++.+.-.++.+++...-....++.|.++||.+ +.|.+.+++.+.||.++.. ..+.|+.|+|||+.|+.-.+
T Consensus 414 l~RAvlEgia~~~r~~~~~l~~~g~~~~~i~~~GGga~ks~~~~Qi~ADv~g~pV~~-~~~~e~~alGaA~lA~~a~G 490 (572)
T 3jvp_A 414 IYRALLEATAFGTRAIVDAFHGRGVEVHELYACGGLPQKNHLLMQIFADVTNREIKV-AASKQTPALGAAMFASVAAG 490 (572)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEEESSHHHHCHHHHHHHHHHHTSCEEE-BCCSSHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCcCEEEEEcCchhhCHHHHHHHHHHHCCeeEe-cCCCccHHHHHHHHHHHhcC
Confidence 4444555444433333332221233578999999999 9999999999999988754 34678999999999986554
No 52
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=95.10 E-value=0.035 Score=61.11 Aligned_cols=51 Identities=25% Similarity=0.327 Sum_probs=43.3
Q ss_pred CCceEEEecCccCcHHHHHHHHHHhCCCCCCCCCchhHHHhhHHHhhhhhcC
Q psy3918 323 DIGEVLLVGGMTRMPKVQSTVQEIFGKVPSRAVNPDEAVAIGAAVQGGVLAG 374 (668)
Q Consensus 323 ~I~~ViLVGGssriP~V~~~l~~~Fg~~~~~~~npdeaVA~GAai~aa~ls~ 374 (668)
.++.|.++||.++.+.+.+++.+.||.++... .+.|+.|+|||+.|+.-.+
T Consensus 398 ~~~~i~~~GG~a~n~~~~q~~Adv~g~pV~~~-~~~e~~alGaA~la~~a~G 448 (495)
T 2dpn_A 398 RLKVLKADGGMAQNRLFLKIQADLLGVPVAVP-EVTETTALGAALMAGVGAG 448 (495)
T ss_dssp CCCCEEEESGGGGCHHHHHHHHHHHTSCEEEE-SCSCHHHHHHHHHHHHHHT
T ss_pred CCcEEEEecccccCHHHHHHHHHHhCCeeEec-CCcccHHHHHHHHHHhhcC
Confidence 46889999999999999999999999887543 4566999999999986554
No 53
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=94.96 E-value=0.023 Score=62.93 Aligned_cols=52 Identities=23% Similarity=0.281 Sum_probs=44.4
Q ss_pred CCceEEEecCccCcHHHHHHHHHHhCCCCCCCCCchhHHHhhHHHhhhhhcCC
Q psy3918 323 DIGEVLLVGGMTRMPKVQSTVQEIFGKVPSRAVNPDEAVAIGAAVQGGVLAGD 375 (668)
Q Consensus 323 ~I~~ViLVGGssriP~V~~~l~~~Fg~~~~~~~npdeaVA~GAai~aa~ls~~ 375 (668)
.++.|.++||.++.+.+.+++.+.||.++.. ..+.|+.|+|||+.|+.-.+.
T Consensus 401 ~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~-~~~~e~~alGaA~lA~~a~G~ 452 (510)
T 2p3r_A 401 RLHALRVDGGAVANNFLMQFQSDILGTRVER-PEVREVTALGAAYLAGLAVGF 452 (510)
T ss_dssp CCSEEEEESGGGGCHHHHHHHHHHHTSEEEE-ESCCCHHHHHHHHHHHHHHTS
T ss_pred CccEEEEeCchhcCHHHHHHHHHHhCCceEe-cCCCCcHHHHHHHHHHHHhCc
Confidence 4789999999999999999999999988754 346779999999999876553
No 54
>4e81_A Chaperone protein DNAK; chaperone; 1.90A {Escherichia coli} PDB: 3dpp_A* 3dpq_A* 3qnj_A 3dpo_A 1dkz_A 1dky_A 1dkx_A 1bpr_A 2bpr_A 1dg4_A
Probab=94.90 E-value=0.098 Score=50.91 Aligned_cols=33 Identities=85% Similarity=1.223 Sum_probs=30.5
Q ss_pred eeeeeccccccccccccceeEEeeecCcccCCC
Q psy3918 425 VLLLDVTPLSLGIETLGGVFTRLITRNTTIPTK 457 (668)
Q Consensus 425 ~~~~~~~~~~~g~~~~~~~f~~~~~~n~~~p~~ 457 (668)
++++|++|+++|+++.++.|..+|+||+++|..
T Consensus 1 ~~l~DV~p~slGie~~gg~~~~lI~rnt~iP~~ 33 (219)
T 4e81_A 1 VLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTK 33 (219)
T ss_dssp CCCCCBCSSCEEEEETTTEEEEEECTTCBSSEE
T ss_pred CeEEEecCcEEEEEEeCCEEEEEEeCcCcccEe
Confidence 357899999999999999999999999999974
No 55
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=94.46 E-value=0.064 Score=59.21 Aligned_cols=80 Identities=20% Similarity=0.260 Sum_probs=55.1
Q ss_pred eHHHHH-HHHHHHHHHHHHHHHHHHHHcCCCCCCCceEEEecCccCcHHHHHHHHHHhCCCCCCCCCchhHHHhhHHHhh
Q psy3918 291 TRSKFE-SLVGDLIKKTVNPCQKALQDADCKNSDIGEVLLVGGMTRMPKVQSTVQEIFGKVPSRAVNPDEAVAIGAAVQG 369 (668)
Q Consensus 291 Tr~efe-~l~~~l~~~i~~~i~~~L~~a~~~~~~I~~ViLVGGssriP~V~~~l~~~Fg~~~~~~~npdeaVA~GAai~a 369 (668)
||.++- .+++.+.-.+...++..-+..+. .++.|.++||.++.+.+.+++.+.||.++.. ..+.|+.|+|||+.|
T Consensus 373 ~~~~l~rAvlEgia~~~~~~~~~l~~~~g~---~~~~i~~~GG~a~s~~~~Qi~Adv~g~pV~~-~~~~e~~alGaA~lA 448 (504)
T 2d4w_A 373 NRNHIARAALEATAFQSREVVDAMNADSGV---DLTELRVDGGMVANELLMQFQADQLGVDVVR-PKVAETTALGAAYAA 448 (504)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHSC---CCCEEEEESGGGGCHHHHHHHHHHHTSCEEE-ESCSCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CcceEEEeCCcccCHHHHHHHHHHhCCeEEe-CCCCcchHHHHHHHH
Confidence 344333 23334444444444433233443 3688999999999999999999999988754 345679999999999
Q ss_pred hhhcC
Q psy3918 370 GVLAG 374 (668)
Q Consensus 370 a~ls~ 374 (668)
+.-.+
T Consensus 449 ~~~~G 453 (504)
T 2d4w_A 449 GIAVG 453 (504)
T ss_dssp HHHHT
T ss_pred HhhcC
Confidence 86554
No 56
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=94.42 E-value=0.037 Score=61.11 Aligned_cols=73 Identities=18% Similarity=0.178 Sum_probs=51.6
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCCC-ceEEEecCccCcHHHHHHHHHHhCCCCCCCCCchhHHHhhHHHhhhhhcC
Q psy3918 298 LVGDLIKKTVNPCQKALQDADCKNSDI-GEVLLVGGMTRMPKVQSTVQEIFGKVPSRAVNPDEAVAIGAAVQGGVLAG 374 (668)
Q Consensus 298 l~~~l~~~i~~~i~~~L~~a~~~~~~I-~~ViLVGGssriP~V~~~l~~~Fg~~~~~~~npdeaVA~GAai~aa~ls~ 374 (668)
+++-+.-.+...++..-+..+. .+ +.|.++||.++.|.+.+++.+.||.++.. ..+.|+.|+|||+.|+.-.+
T Consensus 384 vlEgia~~~~~~~~~l~~~~g~---~~~~~i~~~GG~a~s~~~~Q~~Adv~g~pV~~-~~~~e~~alGaA~la~~~~G 457 (503)
T 2w40_A 384 LLEGIAFQLNEIVDSLTSDMGI---EMLHVLRCDGGMTKNKPFMQFNSDIINTKIEV-SKYKEVTSLGAAVLAGLEVK 457 (503)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTC---SCCSCEEEESGGGGCHHHHHHHHHHHTSCEEE-ESCSCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHhcCC---CccceEEEeCccccCHHHHHHHHHHHCCeEEe-cCCCcchHHHHHHHHHHHhC
Confidence 3333444444444433222343 35 78999999999999999999999988754 34566999999999986554
No 57
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=93.95 E-value=0.054 Score=59.54 Aligned_cols=77 Identities=13% Similarity=0.076 Sum_probs=50.7
Q ss_pred EeeHHHHH-HHHHHHHHHHHHHHHHHHHHcCCCCCCCceEEEecCccCcHHHHHHHHHHhCCCCCCCCCchhHHHhhHHH
Q psy3918 289 KLTRSKFE-SLVGDLIKKTVNPCQKALQDADCKNSDIGEVLLVGGMTRMPKVQSTVQEIFGKVPSRAVNPDEAVAIGAAV 367 (668)
Q Consensus 289 ~iTr~efe-~l~~~l~~~i~~~i~~~L~~a~~~~~~I~~ViLVGGssriP~V~~~l~~~Fg~~~~~~~npdeaVA~GAai 367 (668)
.-||.++- .+++.+.-.+...++..-+..+. .++.|.++||.++.+.+.+++.+.||.++.... .|+.|+|||+
T Consensus 361 ~~t~~~l~RAvlEgia~~~r~~~~~l~~~~g~---~~~~i~~~GGgaks~~~~Qi~ADvlg~pV~~~~--~e~~alGaa~ 435 (489)
T 2uyt_A 361 PESDAELARCIFDSLALLYADVLHELAQLRGE---DFSQLHIVGGGCQNTLLNQLCADACGIRVIAGP--VEASTLGNIG 435 (489)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTC---CCSEEEEESGGGGCHHHHHHHHHHHTSEEEECC--TTHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---CCCEEEEeCChhhhHHHHHHHHHHHCCeeecCC--ccHhHHHHHH
Confidence 33555443 23333333444444333222343 368899999999999999999999998875432 5899999965
Q ss_pred hhh
Q psy3918 368 QGG 370 (668)
Q Consensus 368 ~aa 370 (668)
.|.
T Consensus 436 ~A~ 438 (489)
T 2uyt_A 436 IQL 438 (489)
T ss_dssp HHH
T ss_pred HHH
Confidence 554
No 58
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=93.42 E-value=0.15 Score=51.76 Aligned_cols=46 Identities=20% Similarity=0.227 Sum_probs=40.1
Q ss_pred CceEEEecC-ccCcHHHHHHHHHHh---CCCCCCCCCchhHHHhhHHHhh
Q psy3918 324 IGEVLLVGG-MTRMPKVQSTVQEIF---GKVPSRAVNPDEAVAIGAAVQG 369 (668)
Q Consensus 324 I~~ViLVGG-ssriP~V~~~l~~~F---g~~~~~~~npdeaVA~GAai~a 369 (668)
++.|+++|| .+..|.+++.+++.+ +.++..+.+|..+.|+|||+++
T Consensus 237 i~~Vvf~Gg~l~~n~~l~~~l~~~~~~~~~~~~~p~~~~~~gAlGAaL~~ 286 (287)
T 2ews_A 237 TENIVYIGSSFHNNALLRKVVEDYTVLRGCKPYYVENGAFSGAIGALYLE 286 (287)
T ss_dssp CCEEEEESGGGTTCHHHHHHHHHHHHHTTCEEEECTTGGGHHHHHHHHTC
T ss_pred CCeEEEeCCchhcCHHHHHHHHHHHhhCCceEEECCCccHHHHHHHHHhC
Confidence 457999999 899999999999985 5667778899999999999875
No 59
>3n8e_A Stress-70 protein, mitochondrial; beta-sandwich, helix, substrate binding domain, structural G consortium, SGC, chaperone; 2.80A {Homo sapiens}
Probab=91.65 E-value=0.074 Score=50.18 Aligned_cols=37 Identities=73% Similarity=1.015 Sum_probs=27.8
Q ss_pred CccceeeeeccccccccccccceeEEeeecCcccCCC
Q psy3918 421 DVTDVLLLDVTPLSLGIETLGGVFTRLITRNTTIPTK 457 (668)
Q Consensus 421 ~~~~~~~~~~~~~~~g~~~~~~~f~~~~~~n~~~p~~ 457 (668)
....+.+.|++|++||+++.++.|..+|+||+++|..
T Consensus 16 ~~~~f~l~DV~P~slGie~~gg~~~~lI~rnt~iP~~ 52 (182)
T 3n8e_A 16 ENLYFQSMDVTPLSLGIETLGGVFTKLINRNTTIPTK 52 (182)
T ss_dssp --------CBCSSCEEEECTTSBEEEEECTTCBSSEE
T ss_pred CCCCEEEEEecCCEEEEEEeCCEEEEEEeCCCccCEE
Confidence 4456789999999999999999999999999999974
No 60
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=91.37 E-value=0.15 Score=55.77 Aligned_cols=77 Identities=12% Similarity=0.034 Sum_probs=55.9
Q ss_pred EEeeHHHHHHHHHHHHHH--HHHHHHHHHHHcCCCCCCCceEEEecCccCcHHHHHHHHHH-hCCCCCCCCCchhHHHhh
Q psy3918 288 LKLTRSKFESLVGDLIKK--TVNPCQKALQDADCKNSDIGEVLLVGGMTRMPKVQSTVQEI-FGKVPSRAVNPDEAVAIG 364 (668)
Q Consensus 288 ~~iTr~efe~l~~~l~~~--i~~~i~~~L~~a~~~~~~I~~ViLVGGssriP~V~~~l~~~-Fg~~~~~~~npdeaVA~G 364 (668)
+-+|. ..++.-+++. +.-.++.+++...- .+.|.++||.++.|...+++.+. ||.++.... ..|+.|+|
T Consensus 357 ~Gl~~---~~l~RA~lE~~Gia~~~r~~l~~~~~----~~~i~~~GG~a~s~~w~Qi~ADv~~g~pV~~~~-~~e~~alG 428 (482)
T 3h6e_A 357 INRPE---DWFERRAAACLYAALVADTALDLIGS----TGRILVEGRFAEADVFVRALASLRPDCAVYTAN-AHNDVSFG 428 (482)
T ss_dssp ESCCS---SHHHHHHHHHHHHHHHHHHHHHHTTC----CSEEEEESGGGGCHHHHHHHHHHSTTSEEEEES-SCCCTTGG
T ss_pred eCCCH---HHHHHHHHHHHhHHHHHHHHHHHhcC----CCeEEEeCCcccCHHHHHHHhhhcCCCeEEEcC-CCchHHHH
Confidence 34554 4566666663 44455555655432 27899999999999999999999 998875543 45688999
Q ss_pred HHHhhhhh
Q psy3918 365 AAVQGGVL 372 (668)
Q Consensus 365 Aai~aa~l 372 (668)
||+.|+.-
T Consensus 429 AA~lA~~a 436 (482)
T 3h6e_A 429 ALRLIDPG 436 (482)
T ss_dssp GHHHHCTT
T ss_pred HHHHhCcc
Confidence 99999753
No 61
>1q5l_A Chaperone protein DNAK; HSP70, chaperone, heat shock protein; NMR {Escherichia coli} SCOP: b.130.1.1
Probab=91.29 E-value=0.058 Score=48.30 Aligned_cols=36 Identities=67% Similarity=0.999 Sum_probs=28.4
Q ss_pred cceeeeeccccccccccccceeEEeeecCcccCCCC
Q psy3918 423 TDVLLLDVTPLSLGIETLGGVFTRLITRNTTIPTKK 458 (668)
Q Consensus 423 ~~~~~~~~~~~~~g~~~~~~~f~~~~~~n~~~p~~~ 458 (668)
.++.+.|+.|++||+++.++.|..++++|+++|...
T Consensus 15 ~d~~l~Dv~p~slGIe~~~g~~~~lI~rnt~iP~~k 50 (135)
T 1q5l_A 15 RGSHMVDVTPLSLGIETMGGVMTTLIAKNTTIPTKH 50 (135)
T ss_dssp ------CCCSSCCCEEETTTEECCSSCSSSCSSBCC
T ss_pred CcEEEEEeecCcEEEEEECCEEEEEEcCCCeEeEeE
Confidence 467899999999999999999999999999999764
No 62
>3dob_A Heat shock 70 kDa protein F44E5.5; structural genomics, APC90015.11, peptide-binding domain, HS 2, protein structure initiative; 2.39A {Caenorhabditis elegans}
Probab=90.96 E-value=0.075 Score=48.62 Aligned_cols=31 Identities=74% Similarity=1.020 Sum_probs=27.7
Q ss_pred eeeccccccccccccceeEEeeecCcccCCC
Q psy3918 427 LLDVTPLSLGIETLGGVFTRLITRNTTIPTK 457 (668)
Q Consensus 427 ~~~~~~~~~g~~~~~~~f~~~~~~n~~~p~~ 457 (668)
+.|++|++||+++.++.|..+|++|+++|..
T Consensus 2 ~~Dv~p~slGie~~gg~~~~lI~rnt~iP~~ 32 (152)
T 3dob_A 2 NADVAPLSLGIETAGGVMTNLIDRNTRIPTK 32 (152)
T ss_dssp --CBCSSCEEEEETTTEEEEEECTTCBSSEE
T ss_pred ceeeecceEEEEEcCCEEEEEEECcCccCEE
Confidence 5689999999999999999999999999974
No 63
>3dqg_A Heat shock 70 kDa protein F; structural genomics, APC90008.12, HSP70 protein, peptide-BIN domain, PSI-2, protein structure initiative; 1.72A {Caenorhabditis elegans}
Probab=90.55 E-value=0.086 Score=48.15 Aligned_cols=31 Identities=84% Similarity=1.174 Sum_probs=27.7
Q ss_pred eeeccccccccccccceeEEeeecCcccCCC
Q psy3918 427 LLDVTPLSLGIETLGGVFTRLITRNTTIPTK 457 (668)
Q Consensus 427 ~~~~~~~~~g~~~~~~~f~~~~~~n~~~p~~ 457 (668)
+.|++|++||+++.++.|..+|++|+++|..
T Consensus 2 ~~DV~p~slGie~~gg~~~~lI~rnt~iP~~ 32 (151)
T 3dqg_A 2 NADVTPLSLGIETLGGIMTKLITRNTTIPTK 32 (151)
T ss_dssp --CBCSSCEEEEETTTEEEEEECTTCBSSEE
T ss_pred cceeeeeEEEEEEcCCEEEEEEECcCccCEE
Confidence 4689999999999999999999999999974
No 64
>3h0x_A 78 kDa glucose-regulated protein homolog; structural genomics, APC89502.3, peptide binding, chaperone, BIP, PSI-2; 1.92A {Saccharomyces cerevisiae} PDB: 1ckr_A 7hsc_A
Probab=90.42 E-value=0.12 Score=47.35 Aligned_cols=31 Identities=68% Similarity=0.928 Sum_probs=28.4
Q ss_pred eeeccccccccccccceeEEeeecCcccCCC
Q psy3918 427 LLDVTPLSLGIETLGGVFTRLITRNTTIPTK 457 (668)
Q Consensus 427 ~~~~~~~~~g~~~~~~~f~~~~~~n~~~p~~ 457 (668)
+.|++|++||+++.++.|..+|++|+++|..
T Consensus 2 ~~Dv~p~slGi~~~gg~~~~lI~rnt~iP~~ 32 (152)
T 3h0x_A 2 NADVNALTLGIETTGGVMTPLIKRNTAIPTK 32 (152)
T ss_dssp -CCBCSSCEEEEETTTEEEEEECTTCBSSEE
T ss_pred ccceeccEEEEEEcCCEEEEEEECcCccCEE
Confidence 5789999999999999999999999999974
No 65
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=88.20 E-value=1.3 Score=49.68 Aligned_cols=40 Identities=83% Similarity=1.209 Sum_probs=35.8
Q ss_pred ccCCccceeeeeccccccccccccceeEEeeecCcccCCC
Q psy3918 418 LAGDVTDVLLLDVTPLSLGIETLGGVFTRLITRNTTIPTK 457 (668)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~g~~~~~~~f~~~~~~n~~~p~~ 457 (668)
+.+++.++.+.|+.|+++|+++.++.|..++++|+++|..
T Consensus 382 l~~~~~~~~l~dv~p~slgie~~~g~~~~ii~rnt~iP~~ 421 (605)
T 4b9q_A 382 LTGDVKDVLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTK 421 (605)
T ss_dssp HHTSSCSEEEECBCSSCEEEEETTTEEEEEECTTCBSSEE
T ss_pred hcCCCCceEEEeeeeeEEEEEEcCCEEEEEEeCCCcCCcc
Confidence 3456778999999999999999999999999999999974
No 66
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=87.91 E-value=0.66 Score=48.36 Aligned_cols=46 Identities=15% Similarity=0.043 Sum_probs=39.1
Q ss_pred CceEEEecC-ccCcHHHHHHHHHHhC------CCCCCCCCchhHHHhhHHHhh
Q psy3918 324 IGEVLLVGG-MTRMPKVQSTVQEIFG------KVPSRAVNPDEAVAIGAAVQG 369 (668)
Q Consensus 324 I~~ViLVGG-ssriP~V~~~l~~~Fg------~~~~~~~npdeaVA~GAai~a 369 (668)
++.|+++|| .+..|.+.+.|++.++ .++....+|..+-|+|||+.+
T Consensus 306 i~~IvftGgfla~n~~~~~~L~~~l~~ws~g~~~~~~~~~~~y~GAlGAaL~~ 358 (360)
T 2i7n_A 306 IDRVVFVGNFLRINMVSMKLLAYAMDFWSKGQLKALFLEHEGYFGAVGALLEL 358 (360)
T ss_dssp CCCEEEESGGGCSSSHHHHHHHHHHHHHTTTSCCEEEETTTTCHHHHHHHHHH
T ss_pred CCeEEEeCcccccCHHHHHHHHHHHhhhhcCCeeEEEcCCccHHHHHHHHHHh
Confidence 457999999 8999999999999873 455667789999999999975
No 67
>2op6_A Heat shock 70 kDa protein D; HSP70/peptide-binding domain, structural genomics, APC90014. 2, protein structure initiative; 1.85A {Caenorhabditis elegans}
Probab=86.61 E-value=0.29 Score=44.53 Aligned_cols=31 Identities=71% Similarity=1.059 Sum_probs=28.3
Q ss_pred eeeccccccccccccceeEEeeecCcccCCC
Q psy3918 427 LLDVTPLSLGIETLGGVFTRLITRNTTIPTK 457 (668)
Q Consensus 427 ~~~~~~~~~g~~~~~~~f~~~~~~n~~~p~~ 457 (668)
++|++|++||+++.++.|..+|++|+++|..
T Consensus 2 v~Dv~p~slGi~~~~g~~~~li~rnt~iP~~ 32 (152)
T 2op6_A 2 NADVNPLTLGIETVGGVMTKLIGRNTVIPTK 32 (152)
T ss_dssp -CCBCSSCEEEEETTTEEEEEECTTCBSSEE
T ss_pred ceEeecccEEEEEeCCEEEEEEeCCCcccEe
Confidence 5789999999999999999999999999964
No 68
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=85.14 E-value=4.1 Score=45.69 Aligned_cols=40 Identities=83% Similarity=1.209 Sum_probs=35.5
Q ss_pred ccCCccceeeeeccccccccccccceeEEeeecCcccCCC
Q psy3918 418 LAGDVTDVLLLDVTPLSLGIETLGGVFTRLITRNTTIPTK 457 (668)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~g~~~~~~~f~~~~~~n~~~p~~ 457 (668)
+.+++.++.+.|+.|+++|+++.++.|..++++|+++|..
T Consensus 382 l~~~~~~~~l~dv~p~slgi~~~~g~~~~li~r~t~iP~~ 421 (605)
T 2kho_A 382 LTGDVKDVLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTK 421 (605)
T ss_dssp TTTSCCCCCCSBCCCCCEEEEETTTEEEEEECTTBCSSEE
T ss_pred hcCCccCceEEeeeeeeccccccCCceEEEEecccccCcc
Confidence 4445678899999999999999999999999999999964
No 69
>1u00_A HSC66, chaperone protein HSCA; DNAK, HSP70; 1.95A {Escherichia coli} SCOP: a.8.4.1 b.130.1.1
Probab=81.37 E-value=0.64 Score=45.34 Aligned_cols=30 Identities=60% Similarity=1.051 Sum_probs=27.7
Q ss_pred eeccccccccccccceeEEeeecCcccCCC
Q psy3918 428 LDVTPLSLGIETLGGVFTRLITRNTTIPTK 457 (668)
Q Consensus 428 ~~~~~~~~g~~~~~~~f~~~~~~n~~~p~~ 457 (668)
+|++|++||+++.++.|..+|++|+++|..
T Consensus 1 ~Dv~p~slGie~~~g~~~~li~rnt~iP~~ 30 (227)
T 1u00_A 1 MDVIPLSLGLETMGGLVEKVIPRNTTIPVA 30 (227)
T ss_dssp CCBCSSCEEEEETTTEEEEEECTTCBSSEE
T ss_pred CCcccceEEEEEeCCEEEEEEeCcCccCce
Confidence 478999999999999999999999999964
No 70
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=76.89 E-value=1.6 Score=47.97 Aligned_cols=25 Identities=36% Similarity=0.450 Sum_probs=18.3
Q ss_pred CCCCCceEEEEEcCCceEEEEEEeC
Q psy3918 52 SDGVKGQVIGIDLGTTNSCVAVMEG 76 (668)
Q Consensus 52 ~~~~~~~vvGIDlGTt~s~vA~~~~ 76 (668)
+.+.+..++|||+|||++++++++.
T Consensus 2 ~~~~~~~~lgIDiGtts~k~~l~d~ 26 (508)
T 3ifr_A 2 SLAQGRQVIGLDIGTTSTIAILVRL 26 (508)
T ss_dssp -----CEEEEEEECSSEEEEEEEET
T ss_pred CcccCCEEEEEEecCcceEEEEECC
Confidence 4444568999999999999999973
No 71
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=74.07 E-value=2.5 Score=46.55 Aligned_cols=26 Identities=31% Similarity=0.491 Sum_probs=20.6
Q ss_pred cCCCCCceEEEEEcCCceEEEEEEeC
Q psy3918 51 KSDGVKGQVIGIDLGTTNSCVAVMEG 76 (668)
Q Consensus 51 ~~~~~~~~vvGIDlGTt~s~vA~~~~ 76 (668)
++.|-+..++|||+|||++++++++.
T Consensus 20 ~~~MM~~~~lgIDiGtts~k~~l~d~ 45 (520)
T 4e1j_A 20 FQSMMGGYILAIDQGTTSTRAIVFDG 45 (520)
T ss_dssp CCCCCSCEEEEEEECSSEEEEEEECT
T ss_pred HHHHhhCeEEEEEeCCcceEEEEECC
Confidence 34343568999999999999999963
No 72
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=70.66 E-value=2.9 Score=45.80 Aligned_cols=21 Identities=29% Similarity=0.389 Sum_probs=18.7
Q ss_pred CceEEEEEcCCceEEEEEEeC
Q psy3918 56 KGQVIGIDLGTTNSCVAVMEG 76 (668)
Q Consensus 56 ~~~vvGIDlGTt~s~vA~~~~ 76 (668)
+..++|||+|||++++++++.
T Consensus 3 m~~~lgIDiGtts~K~~l~d~ 23 (504)
T 3ll3_A 3 LKYIIGMDVGTTATKGVLYDI 23 (504)
T ss_dssp CEEEEEEEECSSEEEEEEEET
T ss_pred CCEEEEEEecCCceEEEEEcC
Confidence 458999999999999999974
No 73
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=70.02 E-value=3.2 Score=34.60 Aligned_cols=19 Identities=32% Similarity=0.365 Sum_probs=17.1
Q ss_pred eEEEEEcCCceEEEEEEeC
Q psy3918 58 QVIGIDLGTTNSCVAVMEG 76 (668)
Q Consensus 58 ~vvGIDlGTt~s~vA~~~~ 76 (668)
.++|||+|+..++||+.+.
T Consensus 2 riLglD~G~kriGvAvsd~ 20 (98)
T 1iv0_A 2 RVGALDVGEARIGLAVGEE 20 (98)
T ss_dssp CEEEEEESSSEEEEEEECS
T ss_pred cEEEEEeCCCEEEEEEEeC
Confidence 4899999999999999875
No 74
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=68.52 E-value=2.6 Score=45.86 Aligned_cols=20 Identities=45% Similarity=0.559 Sum_probs=16.3
Q ss_pred CceEEEEEcCCceEEEEEEe
Q psy3918 56 KGQVIGIDLGTTNSCVAVME 75 (668)
Q Consensus 56 ~~~vvGIDlGTt~s~vA~~~ 75 (668)
+..++|||+|||++++++++
T Consensus 5 m~~~lgIDiGTts~Ka~l~d 24 (482)
T 3h6e_A 5 TGATIVIDLGKTLSKVSLWD 24 (482)
T ss_dssp ---CEEEEECSSEEEEEEEC
T ss_pred hceEEEEEcCCCCeEEEEEE
Confidence 45799999999999999997
No 75
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=67.88 E-value=14 Score=42.02 Aligned_cols=36 Identities=17% Similarity=0.262 Sum_probs=32.2
Q ss_pred ccceeeeeccccccccccccce----eEEeeecCcccCCC
Q psy3918 422 VTDVLLLDVTPLSLGIETLGGV----FTRLITRNTTIPTK 457 (668)
Q Consensus 422 ~~~~~~~~~~~~~~g~~~~~~~----f~~~~~~n~~~p~~ 457 (668)
+.++.+.|+.|+++|+++.++. |..+|++|+++|..
T Consensus 389 v~~~~l~Dv~p~slgi~~~~~~~~~~~~~li~rnt~iP~~ 428 (675)
T 3d2f_A 389 VRPFKFEDIHPYSVSYSWDKQVEDEDHMEVFPAGSSFPST 428 (675)
T ss_dssp CCCCEEEEEECSCEEEEECCTTCSCSEEEEECTTEEESEE
T ss_pred ccceEEEeeeecceEeeecCCCCCcceEEEEcCCCCCCcc
Confidence 5678999999999999998764 99999999999974
No 76
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=67.14 E-value=3.2 Score=45.22 Aligned_cols=21 Identities=19% Similarity=0.379 Sum_probs=18.5
Q ss_pred CCceEEEEEcCCceEEEEEEe
Q psy3918 55 VKGQVIGIDLGTTNSCVAVME 75 (668)
Q Consensus 55 ~~~~vvGIDlGTt~s~vA~~~ 75 (668)
.+..++|||+|||++++++++
T Consensus 2 ~~~~~lgiDiGtts~k~~l~d 22 (489)
T 2uyt_A 2 TFRNCVAVDLGASSGRVMLAR 22 (489)
T ss_dssp CCEEEEEEEECSSEEEEEEEE
T ss_pred CcceEEEEEecCCCceEEEEE
Confidence 455799999999999999986
No 77
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=65.73 E-value=4.7 Score=35.85 Aligned_cols=21 Identities=33% Similarity=0.472 Sum_probs=18.3
Q ss_pred ceEEEEEcCCceEEEEEEeCC
Q psy3918 57 GQVIGIDLGTTNSCVAVMEGK 77 (668)
Q Consensus 57 ~~vvGIDlGTt~s~vA~~~~~ 77 (668)
+.++|||+|+..++||+.+..
T Consensus 3 ~~iLglD~G~kriGvAvsd~~ 23 (138)
T 1nu0_A 3 GTLMAFDFGTKSIGVAVGQRI 23 (138)
T ss_dssp CEEEEEECCSSEEEEEEEETT
T ss_pred CeEEEEEeCCCEEEEEEEcCC
Confidence 368999999999999998753
No 78
>3ttc_A HYPF, transcriptional regulatory protein; Zn finger, nucleotide binding, hydrogenase maturation factor transferase; HET: ADP; 1.86A {Escherichia coli} PDB: 3tsp_A* 3tsu_A* 3ttf_A* 3ttd_A 3tsq_A
Probab=64.85 E-value=17 Score=40.88 Aligned_cols=63 Identities=10% Similarity=0.129 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHHcCCCCCCCceEEEecCccCcHHHHHHHHHHh-CCCCC---CCCCchhHHHhhHHHhhhh
Q psy3918 304 KKTVNPCQKALQDADCKNSDIGEVLLVGGMTRMPKVQSTVQEIF-GKVPS---RAVNPDEAVAIGAAVQGGV 371 (668)
Q Consensus 304 ~~i~~~i~~~L~~a~~~~~~I~~ViLVGGssriP~V~~~l~~~F-g~~~~---~~~npdeaVA~GAai~aa~ 371 (668)
+.+.+.+.++.+.. .++.|+|.||..+-.++++.|.+.+ |.++. ...--|-++|+|.|+.|+.
T Consensus 585 ~~L~~~~~ra~~~~-----g~~~VvLsGGV~~N~~Lre~L~~~l~g~~v~~p~~~p~~DnGiaLGQA~~a~~ 651 (657)
T 3ttc_A 585 QGFAALMREQATMR-----GITTLVFSGGVIHNRLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQGVIAAA 651 (657)
T ss_dssp HHHHHHHHHHHHTT-----TCCEEEEESGGGGCHHHHHHHHHHTTTSEEECCCSSCSSGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHc-----CCCEEEEECcHHHHHHHHHHHHHHhCCCEEEecCCCCCCcHHHHHHHHHHHHH
Confidence 33444444444433 3579999999999999999999988 44332 2233589999999998863
No 79
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=64.36 E-value=4.7 Score=44.24 Aligned_cols=20 Identities=30% Similarity=0.419 Sum_probs=18.3
Q ss_pred CceEEEEEcCCceEEEEEEe
Q psy3918 56 KGQVIGIDLGTTNSCVAVME 75 (668)
Q Consensus 56 ~~~vvGIDlGTt~s~vA~~~ 75 (668)
+..++|||+|||++++++++
T Consensus 4 ~~~~lgIDiGtts~ka~l~d 23 (515)
T 3i8b_A 4 RTLVAGVDTSTQSCKVRVTD 23 (515)
T ss_dssp SCEEEEEEECSSEEEEEEEE
T ss_pred CcEEEEEEeccccEEEEEEE
Confidence 45899999999999999998
No 80
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=63.94 E-value=16 Score=37.53 Aligned_cols=68 Identities=19% Similarity=0.206 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCceEEEecCccCcHHHHHHHHHHh---CCCCCCC---CCchhHHHhhHHHhhhhhcC
Q psy3918 302 LIKKTVNPCQKALQDADCKNSDIGEVLLVGGMTRMPKVQSTVQEIF---GKVPSRA---VNPDEAVAIGAAVQGGVLAG 374 (668)
Q Consensus 302 l~~~i~~~i~~~L~~a~~~~~~I~~ViLVGGssriP~V~~~l~~~F---g~~~~~~---~npdeaVA~GAai~aa~ls~ 374 (668)
+.+.+.+.++++++..+ ++.|+|.||...-.++++.|.+.+ |.++..+ +--|.++++|+|.+-....+
T Consensus 233 l~~~l~~~~~~a~~~~g-----~~~vvlsGGVa~N~~L~~~L~~~l~~~g~~v~~p~~~~~~D~G~~iG~a~~~~~~~g 306 (334)
T 3eno_A 233 AFAMLVEVLERALYVSG-----KDEILMAGGVALNRRLRDMVTNMAREAGIRSYLTDREYCMDNGIMIAQAALLMYKSG 306 (334)
T ss_dssp HHHHHHHHHHHHHHHHT-----CSEEEEESSGGGCHHHHHHHHHHHHHHTSEEECCCTTTTSCCTHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcC-----CCeEEEcCCHHHHHHHHHHHHHHHHHcCCEEEecCCCCCChHHHHHHHHHHHHHHcC
Confidence 44555566666666655 478999999999999999999887 4443322 23588999999876544433
No 81
>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}
Probab=62.98 E-value=23 Score=27.44 Aligned_cols=43 Identities=9% Similarity=0.298 Sum_probs=33.8
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC
Q psy3918 543 VKNAEQYATEDKVKRDRVEALNQAESIVHDTESKMEEFKAQLP 585 (668)
Q Consensus 543 ~~~~~~~~~~D~~~~~~~ea~N~lE~~i~~~~~~l~~~~~~~~ 585 (668)
.++.++....|...++++....+.|+.|-.+++.|.+|+..++
T Consensus 29 ~~K~eELr~kd~~I~eLEk~L~ekd~eI~~LqseLDKfrSVl~ 71 (72)
T 3nmd_A 29 QEKIEELRQRDALIDELELELDQKDELIQMLQNELDKYRSVIR 71 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 3445667778888888888888888888888888888876654
No 82
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=62.93 E-value=4.7 Score=44.31 Aligned_cols=20 Identities=40% Similarity=0.602 Sum_probs=18.1
Q ss_pred CceEEEEEcCCceEEEEEEe
Q psy3918 56 KGQVIGIDLGTTNSCVAVME 75 (668)
Q Consensus 56 ~~~vvGIDlGTt~s~vA~~~ 75 (668)
+.+++|||+|||++.+++++
T Consensus 3 kkYvlgID~GTss~Ka~l~d 22 (526)
T 3ezw_A 3 KKYIVALDQGTTSSRAVVMD 22 (526)
T ss_dssp CCEEEEEEECSSEEEEEEEC
T ss_pred ceEEEEEEccccceeeeEEc
Confidence 45899999999999999986
No 83
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=61.87 E-value=5.4 Score=44.19 Aligned_cols=21 Identities=29% Similarity=0.482 Sum_probs=18.5
Q ss_pred CceEEEEEcCCceEEEEEEeC
Q psy3918 56 KGQVIGIDLGTTNSCVAVMEG 76 (668)
Q Consensus 56 ~~~vvGIDlGTt~s~vA~~~~ 76 (668)
+..++|||+|||++++++++.
T Consensus 4 ~~~~lgIDiGtts~ka~l~d~ 24 (554)
T 3l0q_A 4 ASYFIGVDVGTGSARAGVFDL 24 (554)
T ss_dssp CCEEEEEEECSSEEEEEEEET
T ss_pred CcEEEEEEECcccEEEEEECC
Confidence 458999999999999999973
No 84
>3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of [NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET: APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB: 3vti_A
Probab=60.82 E-value=23 Score=40.59 Aligned_cols=65 Identities=18% Similarity=0.198 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHHHcCCCCCCCceEEEecCccCcHHHHHHHHHHh---CCCCCC---CCCchhHHHhhHHHhhhhhc
Q psy3918 304 KKTVNPCQKALQDADCKNSDIGEVLLVGGMTRMPKVQSTVQEIF---GKVPSR---AVNPDEAVAIGAAVQGGVLA 373 (668)
Q Consensus 304 ~~i~~~i~~~L~~a~~~~~~I~~ViLVGGssriP~V~~~l~~~F---g~~~~~---~~npdeaVA~GAai~aa~ls 373 (668)
+.+.+.+.++.+..+ ++.|+|.||...-.++++.|.+.+ |.++.. ..--|-++|+|+|+.|+...
T Consensus 679 ~~L~~~~~~a~~~~g-----~~~VvLsGGVa~N~~Lr~~L~~~l~~~g~~v~~p~~~p~~DgGialGQA~~a~~~~ 749 (761)
T 3vth_A 679 NFTYDLANLIRKETG-----INKVVLSGGSFQNRYLLRRLIEKLSLSGFEVYSNSKVPCNDGGISLGQAVIANKIL 749 (761)
T ss_dssp HHHHHHHHHHHHHHC-----CCEEEEESGGGGSHHHHHHHHHHHHHTTCEEEECSSSCSSGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhC-----CCEEEEECcHHHHHHHHHHHHHHHHhCCCEEEecCCCCCCchHHHHHHHHHHHHHh
Confidence 334444455555444 578999999999999999999887 433321 22248999999999887543
No 85
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=60.21 E-value=17 Score=37.20 Aligned_cols=65 Identities=17% Similarity=0.167 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCceEEEecCccCcHHHHHHHHHHh---CCCCCCCC---CchhHHHhhHHHhhhh
Q psy3918 302 LIKKTVNPCQKALQDADCKNSDIGEVLLVGGMTRMPKVQSTVQEIF---GKVPSRAV---NPDEAVAIGAAVQGGV 371 (668)
Q Consensus 302 l~~~i~~~i~~~L~~a~~~~~~I~~ViLVGGssriP~V~~~l~~~F---g~~~~~~~---npdeaVA~GAai~aa~ 371 (668)
+.+.+.+.+.++.+..+ ++.|+|.||...-..+++.|.+.+ |.++..+. --|.++++|+|.+...
T Consensus 228 l~~~l~~~~~~~~~~~~-----~~~vvlsGGVa~N~~l~~~l~~~l~~~g~~v~~p~~~~~~D~G~~iG~a~~~~~ 298 (330)
T 2ivn_A 228 AFAALVEVTERAVAHTE-----KDEVVLVGGVAANNRLREMLRIMTEDRGIKFFVPPYDLCRDNGAMIAYTGLRMY 298 (330)
T ss_dssp HHHHHHHHHHHHHHHHC-----CSEEEEESGGGGCHHHHHHHHHHHHHHTCEEECCCHHHHSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhC-----CCeEEEEccHHHHHHHHHHHHHHHHHcCCEEEecCCCCCChhHHHHHHHHHHHH
Confidence 33444555555555443 578999999999999999999877 44443332 2367889998876543
No 86
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=60.11 E-value=5.6 Score=35.87 Aligned_cols=20 Identities=35% Similarity=0.581 Sum_probs=17.6
Q ss_pred ceEEEEEcCCceEEEEEEeC
Q psy3918 57 GQVIGIDLGTTNSCVAVMEG 76 (668)
Q Consensus 57 ~~vvGIDlGTt~s~vA~~~~ 76 (668)
+.++|||+|+..+++|+.+.
T Consensus 3 mriLGiDpG~~riGvAv~d~ 22 (150)
T 1vhx_A 3 LRILGLDLGTKTLGVALSDE 22 (150)
T ss_dssp EEEEEEEECSSEEEEEEECT
T ss_pred CEEEEEEccCCEEEEEEEEC
Confidence 36999999999999999864
No 87
>1hjr_A Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli} SCOP: c.55.3.6
Probab=59.61 E-value=9.2 Score=34.78 Aligned_cols=18 Identities=28% Similarity=0.517 Sum_probs=16.5
Q ss_pred eEEEEEcCCceEEEEEEe
Q psy3918 58 QVIGIDLGTTNSCVAVME 75 (668)
Q Consensus 58 ~vvGIDlGTt~s~vA~~~ 75 (668)
.|+|||.|+++++.++.+
T Consensus 2 ~ILGIDPGl~~tG~gvi~ 19 (158)
T 1hjr_A 2 IILGIDPGSRVTGYGVIR 19 (158)
T ss_dssp EEEEEECCSSEEEEEEEE
T ss_pred EEEEEccCCCCeeEEEEE
Confidence 589999999999999885
No 88
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=58.98 E-value=6.2 Score=43.21 Aligned_cols=20 Identities=35% Similarity=0.526 Sum_probs=17.9
Q ss_pred ceEEEEEcCCceEEEEEEeC
Q psy3918 57 GQVIGIDLGTTNSCVAVMEG 76 (668)
Q Consensus 57 ~~vvGIDlGTt~s~vA~~~~ 76 (668)
..++|||+|||++.+++++.
T Consensus 3 ~~~lgIDiGtts~k~~l~d~ 22 (510)
T 2p3r_A 3 KYIVALDQGTTSSRAVVMDH 22 (510)
T ss_dssp CEEEEEEECSSEEEEEEECT
T ss_pred cEEEEEEcCCcceEEEEECC
Confidence 47999999999999999963
No 89
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=58.52 E-value=7.3 Score=42.54 Aligned_cols=21 Identities=38% Similarity=0.534 Sum_probs=18.5
Q ss_pred CceEEEEEcCCceEEEEEEeC
Q psy3918 56 KGQVIGIDLGTTNSCVAVMEG 76 (668)
Q Consensus 56 ~~~vvGIDlGTt~s~vA~~~~ 76 (668)
+..++|||+|||++.+++++.
T Consensus 4 ~~~~lgIDiGtts~k~~l~d~ 24 (506)
T 3h3n_X 4 KNYVMAIDQGTTSSRAIIFDR 24 (506)
T ss_dssp CCEEEEEEECSSEEEEEEEET
T ss_pred CCEEEEEEcCCCceEEEEECC
Confidence 458999999999999999973
No 90
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=58.49 E-value=6.4 Score=39.15 Aligned_cols=19 Identities=32% Similarity=0.602 Sum_probs=17.4
Q ss_pred eEEEEEcCCceEEEEEEeC
Q psy3918 58 QVIGIDLGTTNSCVAVMEG 76 (668)
Q Consensus 58 ~vvGIDlGTt~s~vA~~~~ 76 (668)
.++|||+|+|++.+++++.
T Consensus 4 ~~lGiD~Gst~~k~~l~d~ 22 (270)
T 1hux_A 4 YTLGIDVGSTASKCIILKD 22 (270)
T ss_dssp EEEEEEECSSEEEEEEEET
T ss_pred EEEEEEeccceEEEEEEeC
Confidence 6899999999999999974
No 91
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=58.36 E-value=6.8 Score=43.17 Aligned_cols=21 Identities=19% Similarity=0.348 Sum_probs=18.5
Q ss_pred CceEEEEEcCCceEEEEEEeC
Q psy3918 56 KGQVIGIDLGTTNSCVAVMEG 76 (668)
Q Consensus 56 ~~~vvGIDlGTt~s~vA~~~~ 76 (668)
+..++|||+|||.+++++++.
T Consensus 9 ~~~~lgID~GTts~Ka~l~d~ 29 (538)
T 4bc3_A 9 RRCCLGWDFSTQQVKVVAVDA 29 (538)
T ss_dssp CCEEEEEEECSSEEEEEEEET
T ss_pred CCEEEEEEEcCcCEEEEEECC
Confidence 358999999999999999974
No 92
>4g9i_A Hydrogenase maturation protein HYPF; zinc finger, ATP binding, carbamoyla transferase; 4.50A {Thermococcus kodakarensis}
Probab=58.08 E-value=28 Score=40.06 Aligned_cols=61 Identities=16% Similarity=0.280 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHcCCCCCCCceEEEecCccCcHHHHHHHHHHhC---CCCCCCC---CchhHHHhhHHHhhhh
Q psy3918 306 TVNPCQKALQDADCKNSDIGEVLLVGGMTRMPKVQSTVQEIFG---KVPSRAV---NPDEAVAIGAAVQGGV 371 (668)
Q Consensus 306 i~~~i~~~L~~a~~~~~~I~~ViLVGGssriP~V~~~l~~~Fg---~~~~~~~---npdeaVA~GAai~aa~ 371 (668)
+.+.+.++.+.. .++.|+|.||...-..+.+.|.+.+. .++..+. --|..+|+|+|++|+.
T Consensus 693 L~~~~~~a~~~t-----g~~~VvLSGGVa~N~~L~~~l~~~L~~~G~~v~~p~~vP~nDgGiALGQA~iA~~ 759 (772)
T 4g9i_A 693 FAHTAVERAREF-----GVKNVALSGGVAYNELITKMIRKVVEANGLNFHVTTEVPRGDNGVNVGQAFLGGL 759 (772)
T ss_dssp HHHHHHHHHHTT-----TCSCCCEESSTTCCHHHHHHHHHHGGGSSCCCCCCTTSCSSGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-----CcCEEEEEchHHHHHHHHHHHHHHHHHCCCEEEccCCCCCCcchHHHHHHHHHHH
Confidence 344455554444 35789999999999999999999873 3333221 1388999999998864
No 93
>4fla_A Regulation of nuclear PRE-mRNA domain-containing 1B; structural genomics consortium, SGC, transcription; 2.20A {Homo sapiens}
Probab=58.04 E-value=70 Score=28.70 Aligned_cols=98 Identities=17% Similarity=0.257 Sum_probs=55.5
Q ss_pred CCCHHHHHHHHHHHHHHHHhhHHHHHHHHH-------------------HHHHHHHHHHHHHHHHHHHccCCH--HHHHH
Q psy3918 533 GLSKDEIENMVKNAEQYATEDKVKRDRVEA-------------------LNQAESIVHDTESKMEEFKAQLPA--EECAK 591 (668)
Q Consensus 533 ~ls~~ei~~~~~~~~~~~~~D~~~~~~~ea-------------------~N~lE~~i~~~~~~l~~~~~~~~~--~e~~~ 591 (668)
+...+++-.....++.-..-|...|++... -..|...+.+....|++|...+.. ++|..
T Consensus 21 p~~~~elik~L~~le~sassDa~vrq~Ia~LP~eVsd~s~l~klkDk~~~e~l~~~veeA~~~L~eYn~rL~~E~~dR~~ 100 (152)
T 4fla_A 21 PLLTEELIKALQDLENAASGDATVRQKIASLPQEVQDVSLLEKITDKEAAERLSKTVDEACLLLAEYNGRLAAELEDRRQ 100 (152)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHHHTSCGGGTCGGGGGGCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHhhccccchHHHHHHHHcCCccccCHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455677777777777777778776665432 233334444444455555544433 56667
Q ss_pred HHHHHHHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHH
Q psy3918 592 LKEQIAELQKLIANK---DSVDPEELRKATTTLQQASLKLFE 630 (668)
Q Consensus 592 i~~~l~~~~~wl~~~---~~~~~~~~~~~~~~L~~~~~~i~~ 630 (668)
+.+.|.+........ .....++|+.+++++.+....+-+
T Consensus 101 L~~~L~~~~~~~~~~l~e~e~~leeyK~Kl~rv~~vkkeL~~ 142 (152)
T 4fla_A 101 LARMLVEYTQNQKDVLSEKEKKLEEYKQKLARVTQVRKELKS 142 (152)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777777666555431 112355677777777666655544
No 94
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=57.18 E-value=6.7 Score=43.61 Aligned_cols=21 Identities=24% Similarity=0.423 Sum_probs=18.1
Q ss_pred CceEEEEEcCCceEEEEEEeC
Q psy3918 56 KGQVIGIDLGTTNSCVAVMEG 76 (668)
Q Consensus 56 ~~~vvGIDlGTt~s~vA~~~~ 76 (668)
+..+||||+|||++++++++.
T Consensus 4 ~~~~lgIDiGTts~Ka~l~d~ 24 (572)
T 3jvp_A 4 TKYTIGVDYGTESGRAVLIDL 24 (572)
T ss_dssp -CEEEEEEECSSEEEEEEEET
T ss_pred CCEEEEEecCCcceEEEEEEC
Confidence 358999999999999999974
No 95
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=56.73 E-value=7 Score=42.78 Aligned_cols=21 Identities=24% Similarity=0.262 Sum_probs=18.4
Q ss_pred CceEEEEEcCCceEEEEEEeC
Q psy3918 56 KGQVIGIDLGTTNSCVAVMEG 76 (668)
Q Consensus 56 ~~~vvGIDlGTt~s~vA~~~~ 76 (668)
+..++|||+|||++++++++.
T Consensus 4 m~~~lgIDiGtts~k~~l~d~ 24 (511)
T 3hz6_A 4 AFYIATFDIGTTEVKAALADR 24 (511)
T ss_dssp CCEEEEEEECSSEEEEEEECT
T ss_pred ccEEEEEEeCCCceEEEEECC
Confidence 458999999999999999963
No 96
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=56.11 E-value=7.6 Score=42.35 Aligned_cols=20 Identities=20% Similarity=0.297 Sum_probs=17.8
Q ss_pred ceEEEEEcCCceEEEEEEeC
Q psy3918 57 GQVIGIDLGTTNSCVAVMEG 76 (668)
Q Consensus 57 ~~vvGIDlGTt~s~vA~~~~ 76 (668)
..++|||+|||++++++++.
T Consensus 4 ~~~lgIDiGtT~~k~~l~d~ 23 (503)
T 2w40_A 4 NVILSIDQSTQSTKVFFYDE 23 (503)
T ss_dssp EEEEEEEECSSEEEEEEEET
T ss_pred cEEEEEEeCCcceEEEEECC
Confidence 47899999999999999974
No 97
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=54.81 E-value=7.2 Score=42.43 Aligned_cols=19 Identities=26% Similarity=0.337 Sum_probs=17.3
Q ss_pred eEEEEEcCCceEEEEEEeC
Q psy3918 58 QVIGIDLGTTNSCVAVMEG 76 (668)
Q Consensus 58 ~vvGIDlGTt~s~vA~~~~ 76 (668)
.++|||+|||++.+++++.
T Consensus 3 ~~lgiDiGtT~~k~~l~d~ 21 (495)
T 2dpn_A 3 FLLALDQGTTSSRAILFTL 21 (495)
T ss_dssp CEEEEEECSSEEEEEEECT
T ss_pred EEEEEeeCCcceEEEEECC
Confidence 6899999999999999963
No 98
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=53.54 E-value=5.1 Score=43.85 Aligned_cols=38 Identities=82% Similarity=1.253 Sum_probs=34.1
Q ss_pred CCccceeeeeccccccccccccceeEEeeecCcccCCC
Q psy3918 420 GDVTDVLLLDVTPLSLGIETLGGVFTRLITRNTTIPTK 457 (668)
Q Consensus 420 ~~~~~~~~~~~~~~~~g~~~~~~~f~~~~~~n~~~p~~ 457 (668)
+++.++.+.|+.|+++|+++.++.|..++++|+++|..
T Consensus 353 ~~~~~~~~~dv~p~slgi~~~~~~~~~li~~~~~iP~~ 390 (509)
T 2v7y_A 353 GEVKDVVLLDVTPLSLGIETMGGVFTKLIERNTTIPTS 390 (509)
T ss_dssp TCCCCCCCCCBCSSEEEEEETTTEEEEEECTTCBSSEE
T ss_pred CCccCceEEEeeccccceeecCCceEEEEeCCCcCCcc
Confidence 34567889999999999999999999999999999964
No 99
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis}
Probab=53.34 E-value=29 Score=36.04 Aligned_cols=69 Identities=14% Similarity=0.162 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCCCCceEEEecCccCcHHHHHHHHHHhCC-CC------CCCCCchhHHHhhHHHh
Q psy3918 296 ESLVGDLIKKTVNPCQKALQDADCKNSDIGEVLLVGGMTRMPKVQSTVQEIFGK-VP------SRAVNPDEAVAIGAAVQ 368 (668)
Q Consensus 296 e~l~~~l~~~i~~~i~~~L~~a~~~~~~I~~ViLVGGssriP~V~~~l~~~Fg~-~~------~~~~npdeaVA~GAai~ 368 (668)
+++..-+.+=+...|.+.+.... ..+.|+++||+++-|.+.++|++.++. .+ ..+.+..||+|. |++
T Consensus 266 ~Dv~ATLt~~TA~sIa~~~~~~~----~~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~t~~~Gi~~d~~EA~aF--A~L 339 (370)
T 3cqy_A 266 EDIQSTLLDLTCHSIAQDILKLA----QEGELFVCGGGAFNAELMQRLAALLPGYRIDTTSALGVDPKWAEGIAF--AWL 339 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHC----SSEEEEEESGGGGCHHHHHHHHHHCTTEEEEEGGGGTCCTTTHHHHHH--HHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcC----CCCEEEEECCCcCCHHHHHHHHHhCCCCeeeeHHHhCCChhHHHHHHH--HHH
Confidence 34444455555566666665542 357999999999999999999999953 22 122344566655 555
Q ss_pred hh
Q psy3918 369 GG 370 (668)
Q Consensus 369 aa 370 (668)
|.
T Consensus 340 A~ 341 (370)
T 3cqy_A 340 AM 341 (370)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 100
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=53.06 E-value=8.8 Score=41.75 Aligned_cols=20 Identities=25% Similarity=0.413 Sum_probs=17.8
Q ss_pred ceEEEEEcCCceEEEEEEeC
Q psy3918 57 GQVIGIDLGTTNSCVAVMEG 76 (668)
Q Consensus 57 ~~vvGIDlGTt~s~vA~~~~ 76 (668)
..++|||+|||++.+++++.
T Consensus 3 ~~~lgiDiGtt~~k~~l~d~ 22 (497)
T 2zf5_O 3 KFVLSLDEGTTSARAIIFDR 22 (497)
T ss_dssp CEEEEEEECSSEEEEEEECT
T ss_pred cEEEEEecCCchhEEEEECC
Confidence 47899999999999999964
No 101
>4ep4_A Crossover junction endodeoxyribonuclease RUVC; resolvase, hydrolase; 1.28A {Thermus thermophilus} PDB: 4ep5_A
Probab=52.86 E-value=13 Score=34.08 Aligned_cols=18 Identities=39% Similarity=0.501 Sum_probs=16.7
Q ss_pred eEEEEEcCCceEEEEEEe
Q psy3918 58 QVIGIDLGTTNSCVAVME 75 (668)
Q Consensus 58 ~vvGIDlGTt~s~vA~~~ 75 (668)
.|+|||.|+++++.++.+
T Consensus 2 rILGIDPGl~~tG~gvi~ 19 (166)
T 4ep4_A 2 VVAGIDPGITHLGLGVVA 19 (166)
T ss_dssp EEEEEECCSSEEEEEEEE
T ss_pred EEEEEccccCceEEEEEE
Confidence 689999999999999986
No 102
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=52.66 E-value=8.9 Score=41.77 Aligned_cols=20 Identities=30% Similarity=0.429 Sum_probs=17.9
Q ss_pred ceEEEEEcCCceEEEEEEeC
Q psy3918 57 GQVIGIDLGTTNSCVAVMEG 76 (668)
Q Consensus 57 ~~vvGIDlGTt~s~vA~~~~ 76 (668)
..++|||+|||++.+++++.
T Consensus 6 ~~~lgIDiGtts~k~~l~d~ 25 (501)
T 3g25_A 6 KYILSIDQGTTSSRAILFNQ 25 (501)
T ss_dssp CEEEEEEECSSEEEEEEECT
T ss_pred cEEEEEEeCccceEEEEEcC
Confidence 47999999999999999963
No 103
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=52.58 E-value=9.5 Score=37.87 Aligned_cols=71 Identities=21% Similarity=0.295 Sum_probs=40.4
Q ss_pred EeeHHHHHHHHHHHHHHHHHHHHHHHHHcCCC--CCCCceEEEecCccCcHHHHHHHHHHhCCCCCCCCCchhHHHhhHH
Q psy3918 289 KLTRSKFESLVGDLIKKTVNPCQKALQDADCK--NSDIGEVLLVGGMTRMPKVQSTVQEIFGKVPSRAVNPDEAVAIGAA 366 (668)
Q Consensus 289 ~iTr~efe~l~~~l~~~i~~~i~~~L~~a~~~--~~~I~~ViLVGGssriP~V~~~l~~~Fg~~~~~~~npdeaVA~GAa 366 (668)
.+-++..+.+-.-++.-....|+.++++..-. ...--.|+++||.+.+- ... +....++|+ -+-.|..
T Consensus 181 ~~g~nT~~ai~sGi~~g~~g~i~~~i~~~~~~~~~~~~~~vi~TGG~a~~l------~~~---~~~~~~~~~-LvL~GL~ 250 (266)
T 3djc_A 181 VVGRSTIESIQSGVYYGVLGACKELIQRIHHEAFNGDQILILATGGFASLF------DKQ---GLYDHLVPD-LVLQGIR 250 (266)
T ss_dssp SCBSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCEEEEEESTTGGGG------TTT---TCCSEECTT-HHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCEEEEECCChHHh------ccC---CCCCEECcC-hHHHHHH
Confidence 35566777777777777766666666543211 11124799999987621 111 111234555 5777776
Q ss_pred Hhh
Q psy3918 367 VQG 369 (668)
Q Consensus 367 i~a 369 (668)
+..
T Consensus 251 ~i~ 253 (266)
T 3djc_A 251 LAA 253 (266)
T ss_dssp HHH
T ss_pred HHH
Confidence 544
No 104
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=52.44 E-value=32 Score=34.76 Aligned_cols=47 Identities=19% Similarity=0.186 Sum_probs=31.4
Q ss_pred CceEEEecCccCc-HHHHHHHHHHhC----------CCCCCCCCchhHHHhhHHHhhh
Q psy3918 324 IGEVLLVGGMTRM-PKVQSTVQEIFG----------KVPSRAVNPDEAVAIGAAVQGG 370 (668)
Q Consensus 324 I~~ViLVGGssri-P~V~~~l~~~Fg----------~~~~~~~npdeaVA~GAai~aa 370 (668)
.+.|+|-||.++. +.+.+.|++.+. ..+..+.-.+.+.++|||.++.
T Consensus 261 P~~IvlgG~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~i~~s~l~~~a~~~GAa~l~~ 318 (321)
T 3r8e_A 261 LNNILLGGGISGAFDYFVPNLKKAMLEHLPTYYTDDMYIGKATLENDAGLLGAAGLIM 318 (321)
T ss_dssp CCEEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSSGGGHHHHHHHHHHH
T ss_pred CCEEEEeChhcccchHHHHHHHHHHHHhcccccCCCCEEEEcCCCCcHHHHHHHHHHH
Confidence 4789999998876 666666655442 1123344456799999998763
No 105
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A*
Probab=52.38 E-value=40 Score=34.99 Aligned_cols=72 Identities=17% Similarity=0.194 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCCCceEEEecCccCcHHHHHHHHHHhCC-CC----CCCCCchhHHHhhHHHhhhh
Q psy3918 297 SLVGDLIKKTVNPCQKALQDADCKNSDIGEVLLVGGMTRMPKVQSTVQEIFGK-VP----SRAVNPDEAVAIGAAVQGGV 371 (668)
Q Consensus 297 ~l~~~l~~~i~~~i~~~L~~a~~~~~~I~~ViLVGGssriP~V~~~l~~~Fg~-~~----~~~~npdeaVA~GAai~aa~ 371 (668)
++..-+.+=+...|.+.++... ..++.|+++||+.+-|.+.++|++.++. .+ -..++||--=|..-|++|..
T Consensus 260 Dv~ATLt~~TA~sIa~~~~~~~---~~~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~~d~~Gi~~d~~EA~aFA~LA~~ 336 (371)
T 3qbx_A 260 DIQATLLELSARSISESLLDAQ---PDCEEVLVCGGGAFNTALMKRLAMLMPEARVASTDEYGIPPAWMEGMAFAWLAHR 336 (371)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC---TTCCEEEEESGGGGCHHHHHHHHHHCTTSEEEEGGGGTCCTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcc---CCCceEEEECCccCcHHHHHHHHHhCCCCEEeCHHHcCCChhHHHHHHHHHHHHH
Confidence 3444444445555555555433 2367999999999999999999999952 22 12334443333444566643
No 106
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=51.37 E-value=18 Score=36.16 Aligned_cols=47 Identities=21% Similarity=0.177 Sum_probs=34.1
Q ss_pred CCceEEEecCccCcHHHHHHHHHHhCC-CCCCCCCchhHHHhhHHHhhh
Q psy3918 323 DIGEVLLVGGMTRMPKVQSTVQEIFGK-VPSRAVNPDEAVAIGAAVQGG 370 (668)
Q Consensus 323 ~I~~ViLVGGssriP~V~~~l~~~Fg~-~~~~~~npdeaVA~GAai~aa 370 (668)
+.+.|+|.||.+..+.+.+.+++.+.. ++..+. .+.+.++||+.++.
T Consensus 239 ~p~~IvlgGgv~~~~~~~~~l~~~~~~~~i~~~~-~~~~~~~GAa~la~ 286 (299)
T 2e2o_A 239 GTNKVYLKGGMFRSNIYHKFFTLYLEKEGIISDL-GKRSPEIGAVILAY 286 (299)
T ss_dssp TCSEEEEESGGGGSHHHHHHHHHHHHHTTCEEEC-CSCCHHHHHHHHHH
T ss_pred CCCEEEEECCccCcHHHHHHHHHHCCCCeEeccC-CCCChHHHHHHHHH
Confidence 347899999988778888888877743 333333 55789999998775
No 107
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=46.56 E-value=12 Score=37.68 Aligned_cols=22 Identities=23% Similarity=0.243 Sum_probs=17.9
Q ss_pred CceEEEEEcCCceEEEEEEeCC
Q psy3918 56 KGQVIGIDLGTTNSCVAVMEGK 77 (668)
Q Consensus 56 ~~~vvGIDlGTt~s~vA~~~~~ 77 (668)
....+|||+|+|.+++++++++
T Consensus 19 ~~~~iGIDiGsTt~K~V~~~~~ 40 (287)
T 2ews_A 19 SHMKVGIDAGGTLIKIVQEQDN 40 (287)
T ss_dssp --CEEEEEECSSEEEEEEECSS
T ss_pred CCeEEEEEEChhhEEEEEEcCC
Confidence 3468999999999999998654
No 108
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=46.28 E-value=9 Score=42.39 Aligned_cols=36 Identities=83% Similarity=1.141 Sum_probs=33.1
Q ss_pred ccceeeeeccccccccccccceeEEeeecCcccCCC
Q psy3918 422 VTDVLLLDVTPLSLGIETLGGVFTRLITRNTTIPTK 457 (668)
Q Consensus 422 ~~~~~~~~~~~~~~g~~~~~~~f~~~~~~n~~~p~~ 457 (668)
+.++.+.|+.|+++|++..++.|..++++|+++|..
T Consensus 388 ~~~~~~~dv~p~slgi~~~~g~~~~li~r~t~iP~~ 423 (554)
T 1yuw_A 388 VQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTK 423 (554)
T ss_dssp TTSSCCCCBCSSCEEEEETTTEEEEEECTTCBSSEE
T ss_pred ccceEEEEeeeeEEEEEecCceEEEEEECCCccCce
Confidence 467889999999999999999999999999999964
No 109
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=45.97 E-value=12 Score=40.47 Aligned_cols=18 Identities=44% Similarity=0.680 Sum_probs=16.3
Q ss_pred EEEEEcCCceEEEEEEeC
Q psy3918 59 VIGIDLGTTNSCVAVMEG 76 (668)
Q Consensus 59 vvGIDlGTt~s~vA~~~~ 76 (668)
++|||+|||++.+++++.
T Consensus 2 ~lgiDiGtt~~k~~l~d~ 19 (484)
T 2itm_A 2 YIGIDLGTSGVKVILLNE 19 (484)
T ss_dssp EEEEEECSSEEEEEEECT
T ss_pred EEEEEecCcccEEEEECC
Confidence 699999999999999863
No 110
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=45.68 E-value=9.9 Score=41.62 Aligned_cols=29 Identities=7% Similarity=-0.020 Sum_probs=24.8
Q ss_pred CcEEEeeCCCCCHHHHHHHHHHHHHcCCC
Q psy3918 192 KNAVITVPAYFNDSQRQATKDAGQIAGLN 220 (668)
Q Consensus 192 ~~~VITVPa~f~~~qR~a~~~Aa~~AGl~ 220 (668)
..++.-+|..++...-.++.++|...|++
T Consensus 131 ~~~I~v~~~~i~~~d~a~~in~a~~~g~~ 159 (607)
T 1nbw_A 131 EGWIVLIDDAVDFLDAVWWLNEALDRGIN 159 (607)
T ss_dssp TCEEEEECSSSCHHHHHHHHHHHHHTTCC
T ss_pred CCEEEECCCccCHHHHHHHHHHHHHcCCc
Confidence 33444489999999999999999999998
No 111
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=45.25 E-value=42 Score=33.96 Aligned_cols=46 Identities=22% Similarity=0.184 Sum_probs=32.1
Q ss_pred CceEEEecCccCcHHHHHHHHHHhCCCC---------CCCCCchhHHHhhHHHhh
Q psy3918 324 IGEVLLVGGMTRMPKVQSTVQEIFGKVP---------SRAVNPDEAVAIGAAVQG 369 (668)
Q Consensus 324 I~~ViLVGGssriP~V~~~l~~~Fg~~~---------~~~~npdeaVA~GAai~a 369 (668)
.+.|+|-||.+..+.+.+.|++.+.... ..+.-.+.+.++|||.++
T Consensus 270 p~~IvlgGgi~~~~~l~~~l~~~l~~~~~~~~~~~~i~~s~lg~~a~~~GAa~l~ 324 (327)
T 4db3_A 270 PHVVALGGGLSNFELIYEEMPKRVPKYLLSVAKCPKIIKAKHGDSGGVRGAAFLN 324 (327)
T ss_dssp CSEEEEESGGGGCTHHHHHHHHHGGGGSCTTCCCCEEEECSCGGGHHHHHHHHTT
T ss_pred CCEEEEeCcccchHHHHHHHHHHHHHHhccccCCCEEEECCCCCcHHHHHHHHHH
Confidence 4789999999888877777777663221 112234678999999765
No 112
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=44.98 E-value=40 Score=33.56 Aligned_cols=48 Identities=17% Similarity=0.218 Sum_probs=34.7
Q ss_pred CceEEEecCccCcHHHHHHHHHHhCCCC------CCCCCchhHHHhhHHHhhhh
Q psy3918 324 IGEVLLVGGMTRMPKVQSTVQEIFGKVP------SRAVNPDEAVAIGAAVQGGV 371 (668)
Q Consensus 324 I~~ViLVGGssriP~V~~~l~~~Fg~~~------~~~~npdeaVA~GAai~aa~ 371 (668)
.+.|+|-||.+..|.+.+.|++.+.... ..+.-.+.+.++|||.++..
T Consensus 238 p~~IvlgGgi~~~~~~~~~l~~~l~~~~~~~~~i~~s~lg~~a~~~GAa~l~~~ 291 (297)
T 4htl_A 238 PTHIFIGGGITSRPTFIAELKHHMESFGLRDTIIETATHKNQAGLLGAVYHFLQ 291 (297)
T ss_dssp CSEEEEESGGGGSTTHHHHHHHHHTTTCCTTCEEEECSCTTTHHHHHHHHHHHH
T ss_pred CCEEEEeCcccccHHHHHHHHHHHHHhccCCCeEEECCcCChHHHHhHHHHHHH
Confidence 4789999999988888888888774321 12334567999999987653
No 113
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=44.98 E-value=13 Score=40.37 Aligned_cols=19 Identities=42% Similarity=0.531 Sum_probs=17.2
Q ss_pred eEEEEEcCCceEEEEEEeC
Q psy3918 58 QVIGIDLGTTNSCVAVMEG 76 (668)
Q Consensus 58 ~vvGIDlGTt~s~vA~~~~ 76 (668)
.++|||+|||++.+++++.
T Consensus 3 ~~lgiDiGtts~k~~l~d~ 21 (504)
T 2d4w_A 3 YVLAIDQGTTSSRAIVFDH 21 (504)
T ss_dssp EEEEEEECSSEEEEEEECT
T ss_pred EEEEEecCCcceEEEEECC
Confidence 6899999999999999963
No 114
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=44.05 E-value=18 Score=36.38 Aligned_cols=64 Identities=19% Similarity=0.177 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCCCceEEEecCccC--cHHHHHHHHHHhCCCCCCCCCchhHHHhhHHHhhh
Q psy3918 298 LVGDLIKKTVNPCQKALQDADCKNSDIGEVLLVGGMTR--MPKVQSTVQEIFGKVPSRAVNPDEAVAIGAAVQGG 370 (668)
Q Consensus 298 l~~~l~~~i~~~i~~~L~~a~~~~~~I~~ViLVGGssr--iP~V~~~l~~~Fg~~~~~~~npdeaVA~GAai~aa 370 (668)
.+..++++....+-..+...-. . +.+.|+|.||.+. .|.+.+.+++.+ ..|+.+.++||+++|.
T Consensus 227 ~A~~i~~~~~~~L~~~l~~l~~-~-~p~~VvlgGgv~~~~~~~l~~~l~~~i-------~~~~~~~~~GAa~la~ 292 (305)
T 1zc6_A 227 EADALLRQAGEDAWAIARALDP-Q-DELPVALCGGLGQALRDWLPPGFRQRL-------VAPQGDSAQGALLLLQ 292 (305)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCT-T-CCSCEEEESHHHHHTGGGSCHHHHHHC-------CCCSSCHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHhc-C-CCCeEEEECCchHhHHHHHHHHHHhhc-------cCCCCCHHHHHHHHHh
Confidence 3445566666666555554432 2 5678999998764 567777777653 1256778999998874
No 115
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*
Probab=43.30 E-value=26 Score=35.22 Aligned_cols=51 Identities=10% Similarity=0.109 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCCCceEEEecCccCcHHHHHHHHHHhCCC
Q psy3918 297 SLVGDLIKKTVNPCQKALQDADCKNSDIGEVLLVGGMTRMPKVQSTVQEIFGKV 350 (668)
Q Consensus 297 ~l~~~l~~~i~~~i~~~L~~a~~~~~~I~~ViLVGGssriP~V~~~l~~~Fg~~ 350 (668)
+++....+.+...++++|+++++++++|+.|+.-|+++++ -+.+.+.||.+
T Consensus 211 ~~~~~~~~~~~~~i~~aL~~agl~~~did~v~~H~~~~~~---~d~i~~~lg~~ 261 (317)
T 1hnj_A 211 EVFKVAVTELAHIVDETLAANNLDRSQLDWLVPHQANLRI---ISATAKKLGMS 261 (317)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEECCSCHHH---HHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHcCCC
Confidence 3444456677889999999999999999999999998765 45688888754
No 116
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=42.78 E-value=16 Score=37.29 Aligned_cols=20 Identities=25% Similarity=0.227 Sum_probs=17.9
Q ss_pred ceEEEEEcCCceEEEEEEeC
Q psy3918 57 GQVIGIDLGTTNSCVAVMEG 76 (668)
Q Consensus 57 ~~vvGIDlGTt~s~vA~~~~ 76 (668)
+.++|||+|+|++.+++++.
T Consensus 6 ~~~lgiDiGgt~~~~~l~d~ 25 (347)
T 2ch5_A 6 AIYGGVEGGGTRSEVLLVSE 25 (347)
T ss_dssp CEEEEEEECTTCEEEEEEET
T ss_pred eEEEEEEcCccceEEEEEeC
Confidence 48999999999999999873
No 117
>3ven_A O-carbamoyltransferase TOBZ; antibiotic biosynthesis, substrate assisted catalysis, subst channeling, adenylation; HET: TLA; 1.57A {Streptoalloteichus tenebrarius} PDB: 3veo_A 3ves_A* 3vet_A* 3vew_A* 3ver_A* 3vf4_A* 3vf2_A* 3vex_A* 3vez_A*
Probab=42.42 E-value=70 Score=35.25 Aligned_cols=67 Identities=18% Similarity=0.190 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHHHcCCCCCCCceEEEecCccCcHHHHHHHHHHhCC-CCC-CCCCchhHHHhhHHHhhhhhcCC
Q psy3918 304 KKTVNPCQKALQDADCKNSDIGEVLLVGGMTRMPKVQSTVQEIFGK-VPS-RAVNPDEAVAIGAAVQGGVLAGD 375 (668)
Q Consensus 304 ~~i~~~i~~~L~~a~~~~~~I~~ViLVGGssriP~V~~~l~~~Fg~-~~~-~~~npdeaVA~GAai~aa~ls~~ 375 (668)
+-+.+.+.++.+..+ ++.|.|.||.+.-..+.+.|.+..+. .+. ...--|.++++|+|+++....+.
T Consensus 293 ~~L~~~~~~a~~~tg-----~~~l~LaGGVa~N~~L~~~l~~~~~~~~v~vpp~~~D~G~aiGqA~~a~~~~g~ 361 (576)
T 3ven_A 293 RAVFGLADSVLARTG-----ERTLFVAGGVGLNATMNGKLLTRSTVDKMFVPPVASDIGVSLGAAAAVAVELGD 361 (576)
T ss_dssp HHHHHHHHHHHHHHT-----CSEEEEESGGGGCHHHHHHHHTSTTCSEEECCTTCSGGGHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHcC-----CCeEEecchHHHHHHHHHHHHHhcCCCeEEeCCCCCchHHHHHHHHHHHHHcCC
Confidence 334455556655554 57999999999999999999876543 222 22345889999999998766553
No 118
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=41.65 E-value=51 Score=32.91 Aligned_cols=47 Identities=28% Similarity=0.277 Sum_probs=29.5
Q ss_pred CceEEEecCcc-Cc-HHHHHHHHHHhCCC--------CCCCCCchhHHHhhHHHhhh
Q psy3918 324 IGEVLLVGGMT-RM-PKVQSTVQEIFGKV--------PSRAVNPDEAVAIGAAVQGG 370 (668)
Q Consensus 324 I~~ViLVGGss-ri-P~V~~~l~~~Fg~~--------~~~~~npdeaVA~GAai~aa 370 (668)
.+.|+|-||.+ .. |.+.+.|++.+... +..+.-.+.+.++|||.++-
T Consensus 238 p~~ivlgG~i~~~~~~~l~~~l~~~l~~~~~~~~~~~i~~s~lg~~a~~~GAa~l~~ 294 (302)
T 3vov_A 238 PGVVVLGGGVALNAPEGYWEALLEAYRRYLQGWEAPPLRRARLGAEAGLLGAALTAY 294 (302)
T ss_dssp CSEEEEESHHHHTSCHHHHHHHHHHHHHTTTTSCCCCEEECSSGGGHHHHHHHHHHH
T ss_pred CCEEEEeChhHhhhhHHHHHHHHHHHHHhcchhcCCcEEEcCCCCcHHHHHHHHHHH
Confidence 46888888877 53 55665555554211 12233356799999998764
No 119
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=41.24 E-value=60 Score=32.45 Aligned_cols=48 Identities=27% Similarity=0.228 Sum_probs=32.0
Q ss_pred CceEEEecCccC-cHHHHHHHHHHhCCC----------CCCCCCchhHHHhhHHHhhhh
Q psy3918 324 IGEVLLVGGMTR-MPKVQSTVQEIFGKV----------PSRAVNPDEAVAIGAAVQGGV 371 (668)
Q Consensus 324 I~~ViLVGGssr-iP~V~~~l~~~Fg~~----------~~~~~npdeaVA~GAai~aa~ 371 (668)
.+.|+|.||.+. .|.+.+.+++.+... +..+...+.+.++|||.++..
T Consensus 263 p~~IvlgGg~~~~~~~~~~~l~~~l~~~~~~~~~~~~~i~~~~~~~~a~~~GAa~l~~~ 321 (326)
T 2qm1_A 263 PDSVVIGGGVSAAGEFLRSRVEKYFQEFTFPQVRNSTKIKLAELGNEAGVIGAASLALQ 321 (326)
T ss_dssp CSEEEEEESGGGGTHHHHHHHHHHHHHTSCHHHHTTSEEEECSSGGGHHHHHHHHHGGG
T ss_pred CCEEEEcChhhhchHHHHHHHHHHHHHhhhhccCCCcEEEEcCcCchHHHHHHHHHHHH
Confidence 468999999886 577777777665211 122234567899999988753
No 120
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=41.14 E-value=33 Score=33.83 Aligned_cols=46 Identities=20% Similarity=0.176 Sum_probs=32.2
Q ss_pred CceEEEecCccCcHHHHHHHHHHhCCCC-------CCCCCchhHHHhhHHHhh
Q psy3918 324 IGEVLLVGGMTRMPKVQSTVQEIFGKVP-------SRAVNPDEAVAIGAAVQG 369 (668)
Q Consensus 324 I~~ViLVGGssriP~V~~~l~~~Fg~~~-------~~~~npdeaVA~GAai~a 369 (668)
.+.|+|.||.+..|.+.+.+++.+.... ..+...+.+.++|||.++
T Consensus 234 p~~ivlgG~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~~~~~~a~~~GAa~l~ 286 (289)
T 2aa4_A 234 CQCVVVGGSVGLAEGYLALVETYLAQEPAAFHVDLLAAHYRHDAGLLGAALLA 286 (289)
T ss_dssp CSEEEEEHHHHTSTTHHHHHHHHHTTSCGGGCCEEEECSCSSCHHHHHHHHHH
T ss_pred CCEEEEeCcccccHHHHHHHHHHHHHhcCccCCEEEECCCCCchHHHHHHHHH
Confidence 3678888888777888888888774321 122334668999999875
No 121
>1uk5_A BAG-family molecular chaperone regulator-3; triple helix bandle, CAIR-1, BIS, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: a.7.7.1
Probab=40.46 E-value=1.7e+02 Score=24.71 Aligned_cols=60 Identities=12% Similarity=0.172 Sum_probs=42.9
Q ss_pred HHHHccCCHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy3918 578 EEFKAQLPAEECAKLKEQIAELQKLIANKDSVDPEELRKATTTLQQASLKLFEMAYKKMA 637 (668)
Q Consensus 578 ~~~~~~~~~~e~~~i~~~l~~~~~wl~~~~~~~~~~~~~~~~~L~~~~~~i~~r~~~~~~ 637 (668)
+.|...-.+.+...|.+.|....=-|++=+..-.++++.+++.+-..+..+.+..=.+..
T Consensus 47 ~~f~g~k~dkey~~L~E~L~k~LLkLD~IeteG~~~vR~aRK~aVk~iQ~~l~~LD~k~~ 106 (111)
T 1uk5_A 47 DSFEGKKTDKKYLMIEEYLTKELLALDSVDPEGRADVRQARRDGVRKVQTILEKLEQKAS 106 (111)
T ss_dssp HTCCSCSSSHHHHHHHHHHHHHHHHHHSCCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCcchHHHHHHHHHHHHHHHHHCCcCcCCcHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 345555577788888898888887888744444578888888888777877777655543
No 122
>2zqm_A Prefoldin beta subunit 1; chaperone; HET: CIT; 1.90A {Thermococcus SP} PDB: 2zdi_A
Probab=39.11 E-value=1.7e+02 Score=24.35 Aligned_cols=80 Identities=9% Similarity=0.090 Sum_probs=48.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHc-------------cCCHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHH
Q psy3918 555 VKRDRVEALNQAESIVHDTESKMEEFKA-------------QLPAEECAKLKEQIAELQKLIANKDSVDPEELRKATTTL 621 (668)
Q Consensus 555 ~~~~~~ea~N~lE~~i~~~~~~l~~~~~-------------~~~~~e~~~i~~~l~~~~~wl~~~~~~~~~~~~~~~~~L 621 (668)
........+..++.-+......++++.. .+=..++..+...|++-.+.++. ..+.+..+++.+
T Consensus 21 ~~~~l~~q~~~l~~~~~e~~~~~~eL~~l~~d~~vy~~iG~vfv~~~~~ea~~~L~~~~e~ie~----~i~~le~~~~~l 96 (117)
T 2zqm_A 21 QLQLVVQQKQKVQLELTEAKKALDEIESLPDDAVVYKTVGTLIVKTTKDKAVAELKEKIETLEV----RLNALERQEKKL 96 (117)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTSCTTCCEEEEETTEEEEECHHHHHHHHHHHHHHHHH----HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHhHHHhhHHHhhccHHHHHHHHHHHHHHHHH----HHHHHHHHHHHH
Confidence 3334444455555555555555544321 12223566677777777777754 366788888888
Q ss_pred HHHHHHHHHHHHHHHHh
Q psy3918 622 QQASLKLFEMAYKKMAA 638 (668)
Q Consensus 622 ~~~~~~i~~r~~~~~~~ 638 (668)
+.....+-..+|+..++
T Consensus 97 ~~~l~~lk~~l~~~~~~ 113 (117)
T 2zqm_A 97 NEKLKELTAQIQSALRP 113 (117)
T ss_dssp HHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHcc
Confidence 88888888888887754
No 123
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=38.95 E-value=61 Score=31.93 Aligned_cols=47 Identities=19% Similarity=0.143 Sum_probs=30.2
Q ss_pred CceEEEecCccCcHHHHHHHHHHhC----------C-C-CCCCCCchhHHHhhHHHhhh
Q psy3918 324 IGEVLLVGGMTRMPKVQSTVQEIFG----------K-V-PSRAVNPDEAVAIGAAVQGG 370 (668)
Q Consensus 324 I~~ViLVGGssriP~V~~~l~~~Fg----------~-~-~~~~~npdeaVA~GAai~aa 370 (668)
.+.|+|.||.+..|.+.+.+++.+. . . +..+.-.+.+.++|||.++.
T Consensus 228 p~~IvlgG~i~~~~~~~~~l~~~l~~~~~~~~~~~~~~~i~~~~~~~~a~~~GAa~~~~ 286 (292)
T 2gup_A 228 PGVISLGGSISQNPDFIQGVKKAVEDFVDAYEEYTVAPVIQACTYHADANLYGALVNWL 286 (292)
T ss_dssp CSEEEEESGGGGCHHHHHHHHHHHHHHHHHCTTCCSCCCEEECSCSTTHHHHHHHHHHH
T ss_pred CCEEEEeCccccchHHHHHHHHHHHHhhcccccccCCCeEEEcccCChhhHHHHHHHHH
Confidence 4688999998776766666665541 1 1 11122346789999998764
No 124
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=38.55 E-value=21 Score=35.61 Aligned_cols=69 Identities=9% Similarity=-0.068 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCCCceEEEecCccCc--HHHHHHHHHHhCCCCCCCCCchhHHHhhHHHhhhh
Q psy3918 297 SLVGDLIKKTVNPCQKALQDADCKNSDIGEVLLVGGMTRM--PKVQSTVQEIFGKVPSRAVNPDEAVAIGAAVQGGV 371 (668)
Q Consensus 297 ~l~~~l~~~i~~~i~~~L~~a~~~~~~I~~ViLVGGssri--P~V~~~l~~~Fg~~~~~~~npdeaVA~GAai~aa~ 371 (668)
.+...++++..+.+-..+ ...+ ..+.+.|+|.||.+.. +.+++.+++.. .....|..+...||+.++..
T Consensus 210 ~~A~~i~~~~~~~La~~i-~~~~-~~~p~~vvlgGGv~~~~~~~l~~~l~~~~----~~i~~~~~a~~~GA~~la~~ 280 (291)
T 1zbs_A 210 PAVYSLVQNSFDDFLVRN-VLRY-NRPDLPLHFIGSVAFHYREVLSSVIKKRG----LTLGSVLQSPMEGLIQYHHN 280 (291)
T ss_dssp HHHHHHHHHHHHHHHHHH-TGGG-CCTTSCEEEESHHHHHTHHHHHHHHHHTT----CCEEEEESCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH-hccc-CCCCceEEEECchHHhhHHHHHHHHHHcC----CeecccCcCHHHHHHHHHHh
Confidence 344456666666666665 2222 1156789999998775 66666665532 12233668899999998853
No 125
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=38.18 E-value=17 Score=36.31 Aligned_cols=19 Identities=21% Similarity=0.454 Sum_probs=17.2
Q ss_pred eEEEEEcCCceEEEEEEeC
Q psy3918 58 QVIGIDLGTTNSCVAVMEG 76 (668)
Q Consensus 58 ~vvGIDlGTt~s~vA~~~~ 76 (668)
.++|||+|+|++.+++++.
T Consensus 3 ~~lgiDiGgt~~~~~l~d~ 21 (299)
T 2e2o_A 3 IIVGVDAGGTKTKAVAYDC 21 (299)
T ss_dssp CEEEEEECSSCEEEEEECT
T ss_pred EEEEEEeCCCcEEEEEEcC
Confidence 7899999999999999863
No 126
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=37.72 E-value=11 Score=37.71 Aligned_cols=19 Identities=16% Similarity=0.156 Sum_probs=16.9
Q ss_pred EEEEEcCCceEEEEEEeCC
Q psy3918 59 VIGIDLGTTNSCVAVMEGK 77 (668)
Q Consensus 59 vvGIDlGTt~s~vA~~~~~ 77 (668)
++|||+|.|++.+++++++
T Consensus 2 ~lgiDiGGT~~~~~l~d~g 20 (291)
T 1zbs_A 2 ILIGDSGSTKTDWCIAKEG 20 (291)
T ss_dssp EEEEEECSSEEEEEEEETT
T ss_pred EEEEEeCccceEEEEEeCC
Confidence 7999999999999998833
No 127
>2odv_A Plectin 1, HD1; plakin domain, spectrin repeat, cytoskeleton, hemidesmosomes epidermolysis bullosa, structural protein; 2.05A {Homo sapiens} PDB: 2odu_A
Probab=37.50 E-value=2.5e+02 Score=26.91 Aligned_cols=44 Identities=16% Similarity=0.183 Sum_probs=35.3
Q ss_pred CCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy3918 534 LSKDEIENMVKNAEQYATEDKVKRDRVEALNQAESIVHDTESKMEE 579 (668)
Q Consensus 534 ls~~ei~~~~~~~~~~~~~D~~~~~~~ea~N~lE~~i~~~~~~l~~ 579 (668)
-+-.+++....+...|+..++ ..+..-++.||.+++.++.+|..
T Consensus 41 ~sl~~vq~~l~~f~~fr~~ek--ppk~~EK~~Le~ll~~lqtklr~ 84 (235)
T 2odv_A 41 SSFEEIEILWSQFLKFKEMEL--PAKEADKNRSKGIYQSLEGAVQA 84 (235)
T ss_dssp SSHHHHHHHHHHHHHHHHHTH--HHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHHhccC--CHHHHHHHHHHHHHHHHHHHHHc
Confidence 456677888888888887655 56677799999999999999984
No 128
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus}
Probab=37.02 E-value=35 Score=33.97 Aligned_cols=48 Identities=15% Similarity=0.236 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCCceEEEecCccCcHHHHHHHHHHhCCC
Q psy3918 300 GDLIKKTVNPCQKALQDADCKNSDIGEVLLVGGMTRMPKVQSTVQEIFGKV 350 (668)
Q Consensus 300 ~~l~~~i~~~i~~~L~~a~~~~~~I~~ViLVGGssriP~V~~~l~~~Fg~~ 350 (668)
...++.+...++++|+++++++++|+.|++-|+++++ -+.+.+.||..
T Consensus 206 ~~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~---~~~~~~~lg~~ 253 (309)
T 2ebd_A 206 KVAVRSMEEVCREVLEKAGVKPEEVSLVIPHQANVRI---INALAEKLNIP 253 (309)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSCHHH---HHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHhCCC
Confidence 3445677789999999999999999999999998765 34577888754
No 129
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2
Probab=36.54 E-value=34 Score=34.38 Aligned_cols=50 Identities=14% Similarity=0.112 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCCCceEEEecCccCcHHHHHHHHHHhCCC
Q psy3918 298 LVGDLIKKTVNPCQKALQDADCKNSDIGEVLLVGGMTRMPKVQSTVQEIFGKV 350 (668)
Q Consensus 298 l~~~l~~~i~~~i~~~L~~a~~~~~~I~~ViLVGGssriP~V~~~l~~~Fg~~ 350 (668)
++.-..+.+...++++|+++++++++|+.|+.-|+++++ -+.+.+.||.+
T Consensus 214 ~~~~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~---~d~~~~~lg~~ 263 (322)
T 1ub7_A 214 VFKFAVRVMNTATLEAIEKAGLTPEDIRLFVPHQANLRI---IDAARERLGLP 263 (322)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSCHHH---HHHHHHTTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHcCCC
Confidence 334445677889999999999999999999999988764 34677888754
No 130
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=36.27 E-value=42 Score=37.45 Aligned_cols=57 Identities=14% Similarity=0.312 Sum_probs=44.2
Q ss_pred EEEeeHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCceEEEecCccCcHHHHHHHH
Q psy3918 287 NLKLTRSKFESLVGDLIKKTVNPCQKALQDADCKNSDIGEVLLVGGMTRMPKVQSTVQ 344 (668)
Q Consensus 287 ~~~iTr~efe~l~~~l~~~i~~~i~~~L~~a~~~~~~I~~ViLVGGssriP~V~~~l~ 344 (668)
.+.||..+++++..- -.-+..-++-.|+.+|++.++|+.|+|.||+..-=-+...+.
T Consensus 499 ~i~itq~DIr~~qlA-KaAi~agi~~Ll~~~gi~~~di~~v~lAGaFG~~l~~~~a~~ 555 (631)
T 3zyy_X 499 DIVITEADIQNLIRA-KAAIFAGVRTMLAMVDLPLEAIDRVIIAGGFGKYLNIKDAIT 555 (631)
T ss_dssp CEEEEHHHHHHHHHH-HHHHHHHHHHHHHHTTCCGGGCCEEEEESSSCSEEEHHHHHH
T ss_pred cEEEeHHHHHHHHHH-HHHHHHHHHHHHHHcCCCHHHccEEEEeccccccCCHHHHhh
Confidence 478999999977542 223556677788899999999999999999998666665553
No 131
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=36.14 E-value=20 Score=36.37 Aligned_cols=20 Identities=35% Similarity=0.687 Sum_probs=17.8
Q ss_pred ceEEEEEcCCceEEEEEEeC
Q psy3918 57 GQVIGIDLGTTNSCVAVMEG 76 (668)
Q Consensus 57 ~~vvGIDlGTt~s~vA~~~~ 76 (668)
..++|||+|+|++.+++++.
T Consensus 2 ~~~lgiDiGgt~i~~~l~d~ 21 (321)
T 3vgl_A 2 GLTIGVDIGGTKIAAGVVDE 21 (321)
T ss_dssp CEEEEEEECSSEEEEEEECT
T ss_pred cEEEEEEECCCEEEEEEECC
Confidence 47899999999999999863
No 132
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=36.11 E-value=29 Score=36.19 Aligned_cols=48 Identities=15% Similarity=0.221 Sum_probs=33.2
Q ss_pred CCceEEEecCccCcHH-HHHHHHHHhCCCC----CCCCCchhHHHhhHHHhhh
Q psy3918 323 DIGEVLLVGGMTRMPK-VQSTVQEIFGKVP----SRAVNPDEAVAIGAAVQGG 370 (668)
Q Consensus 323 ~I~~ViLVGGssriP~-V~~~l~~~Fg~~~----~~~~npdeaVA~GAai~aa 370 (668)
+++.|+|.||.+..+. +.+.+++.+.... ......+++.++||+..+.
T Consensus 295 ~p~~IvlgGgi~~~~~~l~~~i~~~l~~~~~~~i~~~~~~~~a~~~GAa~l~~ 347 (381)
T 1saz_A 295 EVDFIVLTGGLAHEKEFLVPWITKRVSFIAPVLVFPGSNEEKALALSALRVLR 347 (381)
T ss_dssp CCSEEEEEEGGGGCTTTHHHHHHHHHTTTSCEEEEEBCCHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCcCccChHHHHHHHHHHHHhhcCeEEEecCcchhHHHHHHHHHHc
Confidence 5789999999887544 7788888775321 1122334689999997763
No 133
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=35.15 E-value=22 Score=35.59 Aligned_cols=20 Identities=25% Similarity=0.404 Sum_probs=17.9
Q ss_pred ceEEEEEcCCceEEEEEEeC
Q psy3918 57 GQVIGIDLGTTNSCVAVMEG 76 (668)
Q Consensus 57 ~~vvGIDlGTt~s~vA~~~~ 76 (668)
..+||||+|.|++.+++++.
T Consensus 11 ~~~lGiDiGgT~i~~~l~d~ 30 (305)
T 1zc6_A 11 RYLIGVDGGGTGTRIRLHAS 30 (305)
T ss_dssp CEEEEEEECSSCEEEEEEET
T ss_pred CEEEEEEcCccceEEEEEcC
Confidence 37999999999999999973
No 134
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=33.70 E-value=24 Score=35.46 Aligned_cols=20 Identities=45% Similarity=0.861 Sum_probs=17.8
Q ss_pred eEEEEEcCCceEEEEEEeCC
Q psy3918 58 QVIGIDLGTTNSCVAVMEGK 77 (668)
Q Consensus 58 ~vvGIDlGTt~s~vA~~~~~ 77 (668)
+++|||+|.|++.+++++..
T Consensus 2 ~~lgiDiGgt~i~~~l~d~~ 21 (302)
T 3vov_A 2 KVVGLDLGGTKIAAGVFDGK 21 (302)
T ss_dssp CEEEEEECSSEEEEEEECSS
T ss_pred EEEEEEEcCCEEEEEEEeCC
Confidence 68999999999999998754
No 135
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=33.56 E-value=6.7 Score=39.31 Aligned_cols=68 Identities=7% Similarity=0.004 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCCCceEEEecCccCcHHHHHHHHHHhCCCCCCCCCchhHHHhhHHHhhh
Q psy3918 299 VGDLIKKTVNPCQKALQDADCKNSDIGEVLLVGGMTRMPKVQSTVQEIFGKVPSRAVNPDEAVAIGAAVQGG 370 (668)
Q Consensus 299 ~~~l~~~i~~~i~~~L~~a~~~~~~I~~ViLVGGssriP~V~~~l~~~Fg~~~~~~~npdeaVA~GAai~aa 370 (668)
...++++....+-..+ ...+ ..+.+.|+|.||.+.. +.+.|++.+..+......+..+.++||++++.
T Consensus 210 A~~i~~~~~~~La~~i-~~~~-~~~p~~vvlgGGv~~~--l~~~l~~~l~~~~~~i~~~~~a~~~GAa~la~ 277 (291)
T 1zxo_A 210 IRQLVMNSFIAFFRRN-VMQY-DYKQYPVHFIGSIAYC--YKEILQDAARQTGIQIGKILQSPMEGLIQYHS 277 (291)
T ss_dssp TTHHHHHHHHHHHTTT-GGGS-CTTTSCEEECSHHHHH--THHHHHHHTTTTTCCEEEECSCTHHHHHTTSS
T ss_pred HHHHHHHHHHHHHHHH-hccc-CCCCceEEEECcHHHH--HHHHHHHHHhcCCcEEeecCCCHHHHHHHHHH
Confidence 3445555555555555 2222 1156788888888765 55666666654222222355788899998764
No 136
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2
Probab=32.10 E-value=48 Score=33.64 Aligned_cols=48 Identities=15% Similarity=0.111 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCCceEEEecCccCcHHHHHHHHHHhCCC
Q psy3918 300 GDLIKKTVNPCQKALQDADCKNSDIGEVLLVGGMTRMPKVQSTVQEIFGKV 350 (668)
Q Consensus 300 ~~l~~~i~~~i~~~L~~a~~~~~~I~~ViLVGGssriP~V~~~l~~~Fg~~ 350 (668)
.-..+.+...++++|+++++++++|+.|+.-|+++++ -+.+.+.||.+
T Consensus 227 ~~~~~~~~~~i~~aL~~agl~~~did~v~~H~~~~~~---~d~i~~~lg~~ 274 (339)
T 1mzj_A 227 RWAVADVVPAAREALEVAGLTVGDLVAFVPHQANLRI---IDVLVDRLGVP 274 (339)
T ss_dssp HHHHHHHHHHHHHHHHTTTCCGGGCSEEEECCSCHHH---HHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHHH---HHHHHHHhCCC
Confidence 3345677889999999999999999999999988764 34677788754
No 137
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=32.05 E-value=1.1e+02 Score=30.74 Aligned_cols=47 Identities=19% Similarity=0.154 Sum_probs=29.3
Q ss_pred CceEEEecCccCc-HHHHHHHHHHhC---------C--CCCCCCCchhHHHhhHHHhhh
Q psy3918 324 IGEVLLVGGMTRM-PKVQSTVQEIFG---------K--VPSRAVNPDEAVAIGAAVQGG 370 (668)
Q Consensus 324 I~~ViLVGGssri-P~V~~~l~~~Fg---------~--~~~~~~npdeaVA~GAai~aa 370 (668)
.+.|+|-||.++. +++.+.|++.+. . ++..+.-.+.+.++|||.++.
T Consensus 253 p~~IvlgGgi~~~~~~l~~~l~~~l~~~~~~~~~~~~~~i~~s~l~~~a~l~GAa~l~~ 311 (321)
T 3vgl_A 253 PSAFIVGGGVSDEGELVLDPIRKSFRRWLIGGEWRPHAQVLAAQLGGKAGLVGAADLAR 311 (321)
T ss_dssp CSEEEEESGGGGGTHHHHHHHHHHHHHHCTTGGGSCCCEEEECTTGGGHHHHHHHHHHH
T ss_pred CCEEEEeChhhcchHHHHHHHHHHHHHhcccccccCCCEEEECCCCCcHHHHHHHHHHH
Confidence 4789999998875 555555554442 1 112233367899999997654
No 138
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=31.24 E-value=26 Score=35.03 Aligned_cols=19 Identities=21% Similarity=0.289 Sum_probs=17.4
Q ss_pred ceEEEEEcCCceEEEEEEe
Q psy3918 57 GQVIGIDLGTTNSCVAVME 75 (668)
Q Consensus 57 ~~vvGIDlGTt~s~vA~~~ 75 (668)
+.++|||+|.|++.+++++
T Consensus 4 m~~lgiDiGgt~i~~~l~d 22 (297)
T 4htl_A 4 MKIAAFDIGGTALKMGVVL 22 (297)
T ss_dssp CCEEEEEECSSEEEEEEEC
T ss_pred cEEEEEEeCCCeEEEEEEC
Confidence 4799999999999999986
No 139
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=31.06 E-value=20 Score=35.80 Aligned_cols=17 Identities=24% Similarity=0.257 Sum_probs=14.4
Q ss_pred EEEEEcCCceEEEEEEe
Q psy3918 59 VIGIDLGTTNSCVAVME 75 (668)
Q Consensus 59 vvGIDlGTt~s~vA~~~ 75 (668)
++|||+|.|++.+++++
T Consensus 2 ~lgiDiGGT~i~~~l~d 18 (291)
T 1zxo_A 2 ILIADSGSTKTDWCVVL 18 (291)
T ss_dssp --CEECCTTCEEEEEEC
T ss_pred EEEEEeccccEEEEEEc
Confidence 68999999999999987
No 140
>1f5n_A Interferon-induced guanylate-binding protein 1; GBP, GTP hydrolysis, GDP, GMP, dynamin related, large GTPase family. GMPPNP, GPPNHP.; HET: GNP; 1.70A {Homo sapiens} SCOP: a.114.1.1 c.37.1.8 PDB: 1dg3_A* 2b8w_A* 2b92_A* 2bc9_A* 2d4h_A*
Probab=30.95 E-value=1.8e+02 Score=32.21 Aligned_cols=60 Identities=18% Similarity=0.233 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHH
Q psy3918 565 QAESIVHDTESKMEEFKAQLPAEECAKLKEQIAELQKLIANKDSVDPEELRKATTTLQQASLKLFEM 631 (668)
Q Consensus 565 ~lE~~i~~~~~~l~~~~~~~~~~e~~~i~~~l~~~~~wl~~~~~~~~~~~~~~~~~L~~~~~~i~~r 631 (668)
.++.-|-++..+|++-...+-++.-..|...+.+-.+.|..+ |+.+.+.|++....+..+
T Consensus 523 ~~~e~~~ql~~kme~~~~~~~~e~~~~~~~~~~~~~~~~~~g-------~~~~~~~~~~ei~~l~~~ 582 (592)
T 1f5n_A 523 SYQEHLKQLTEKMENDRVQLLKEQERTLALKLQEQEQLLKEG-------FQKESRIMKNEIQDLQTK 582 (592)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-------CHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHh
Confidence 344455566677765444444566667778888888888766 445555555555544443
No 141
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=30.76 E-value=28 Score=35.06 Aligned_cols=20 Identities=40% Similarity=0.632 Sum_probs=17.9
Q ss_pred ceEEEEEcCCceEEEEEEeC
Q psy3918 57 GQVIGIDLGTTNSCVAVMEG 76 (668)
Q Consensus 57 ~~vvGIDlGTt~s~vA~~~~ 76 (668)
..++|||+|+|++.+++++.
T Consensus 6 ~~~lgiDiggt~~~~~l~d~ 25 (326)
T 2qm1_A 6 KKIIGIDLGGTTIKFAILTT 25 (326)
T ss_dssp CEEEEEEECSSEEEEEEEET
T ss_pred cEEEEEEECCCEEEEEEECC
Confidence 47899999999999999873
No 142
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A
Probab=30.70 E-value=86 Score=31.12 Aligned_cols=50 Identities=12% Similarity=0.178 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCCCceEEEecCccCcHHHHHHHHHHhCCC
Q psy3918 298 LVGDLIKKTVNPCQKALQDADCKNSDIGEVLLVGGMTRMPKVQSTVQEIFGKV 350 (668)
Q Consensus 298 l~~~l~~~i~~~i~~~L~~a~~~~~~I~~ViLVGGssriP~V~~~l~~~Fg~~ 350 (668)
+.....+.+...++++|+++++++++|+.|++-++++++ -+.+.+.||..
T Consensus 206 ~~~~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~---~d~~~~~lg~~ 255 (313)
T 1zow_A 206 VFKFAVRIMGDASTRVVEKANLTSDDIDLFIPHQANIRI---MESARERLGIS 255 (313)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCGGGCSEEEECCSCHHH---HHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHhCCC
Confidence 334455677889999999999999999999999998654 34567788754
No 143
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=29.85 E-value=31 Score=35.05 Aligned_cols=21 Identities=24% Similarity=0.262 Sum_probs=17.9
Q ss_pred CCceEEEEEcCCceEEEEEEe
Q psy3918 55 VKGQVIGIDLGTTNSCVAVME 75 (668)
Q Consensus 55 ~~~~vvGIDlGTt~s~vA~~~ 75 (668)
.+..++|||+|.|++.+++++
T Consensus 12 ~~~~~lgiDiGGT~i~~~l~d 32 (332)
T 1sz2_A 12 STKYALVGDVGGTNARLALCD 32 (332)
T ss_dssp --CEEEEEEEETTEEEEEEEE
T ss_pred CCCEEEEEEechhheEEEEEE
Confidence 356899999999999999997
No 144
>3ls0_A SLL1638 protein, PSBQ; photosynthesis, four helix bundle; 1.80A {Synechocystis SP} PDB: 3ls1_A
Probab=29.80 E-value=1.3e+02 Score=26.28 Aligned_cols=73 Identities=12% Similarity=0.087 Sum_probs=42.9
Q ss_pred CCCHHHHHHHHHHHHHHHHhhHHHHH----------HHHHHHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHH
Q psy3918 533 GLSKDEIENMVKNAEQYATEDKVKRD----------RVEALNQAESIVHDTESKMEEFKAQLPAEECAKLKEQIAELQKL 602 (668)
Q Consensus 533 ~ls~~ei~~~~~~~~~~~~~D~~~~~----------~~ea~N~lE~~i~~~~~~l~~~~~~~~~~e~~~i~~~l~~~~~w 602 (668)
..|+++|+.+.+..+.+.+.-...-+ ..+.+|-+-+=+..+|..|......+.+.++.+..+...++.+-
T Consensus 16 tysp~~i~~Iq~y~~~i~~ar~Rl~e~L~~lI~~~~W~~~Rn~IhGPlg~lr~~m~~l~~~Llp~dqk~A~~lak~l~~~ 95 (133)
T 3ls0_A 16 TYSPEKIAQLQVYVNPIAVARDGMEKRLQGLIADQNWVDTQTYIHGPLGQLRRDMLGLASSLLPKDQDKAKTLAKEVFGH 95 (133)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHTTTTTHHHHHHHHHHHSCHHHHHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhhcchHHHHHHHhchHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHH
Confidence 46888888777666655432221122 23444544444446666665566666677777777776666666
Q ss_pred Hhc
Q psy3918 603 IAN 605 (668)
Q Consensus 603 l~~ 605 (668)
|+.
T Consensus 96 L~~ 98 (133)
T 3ls0_A 96 LER 98 (133)
T ss_dssp HHH
T ss_pred HHH
Confidence 653
No 145
>1ugo_A BCL2-associated athanogene 5; triple helix bundle, riken structural genomics/proteomics initiative, RSGI, structural genomics, chaperone; NMR {Mus musculus} SCOP: a.7.7.1
Probab=29.70 E-value=2.1e+02 Score=23.59 Aligned_cols=60 Identities=12% Similarity=0.151 Sum_probs=39.5
Q ss_pred HHHHHccCCHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy3918 577 MEEFKAQLPAEECAKLKEQIAELQKLIANKDSVDPEELRKATTTLQQASLKLFEMAYKKM 636 (668)
Q Consensus 577 l~~~~~~~~~~e~~~i~~~l~~~~~wl~~~~~~~~~~~~~~~~~L~~~~~~i~~r~~~~~ 636 (668)
.+.|...-.+.+...+.+.|....=-|++=+..-.++++.+.+..-..+..+.+..=.++
T Consensus 34 V~~f~g~k~dkey~~L~E~L~k~LLkLD~IeteG~~~iR~~RK~~Vk~iQ~~l~~LD~k~ 93 (99)
T 1ugo_A 34 VVGFSGLSDDKNYKRLERILTKQLFEIDSVDTEGKGDIQQARKRAAQETERLLKELEQNA 93 (99)
T ss_dssp HHTCCCCTTSSHHHHHHHHHHHHHHHHHHSCCSSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhcCCchhHHHHHHHHHHHHHHHHHcCcCcCCcHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 344554446667778888888777777764443456688887777777777776654443
No 146
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=29.51 E-value=33 Score=33.54 Aligned_cols=21 Identities=24% Similarity=0.425 Sum_probs=18.2
Q ss_pred eEEEEEcCCceEEEEEEeCCe
Q psy3918 58 QVIGIDLGTTNSCVAVMEGKQ 78 (668)
Q Consensus 58 ~vvGIDlGTt~s~vA~~~~~~ 78 (668)
.++.||.|+|+++.|+++++.
T Consensus 4 M~L~IDIGNT~ik~gl~~~~~ 24 (249)
T 3bex_A 4 MYLLVDVGNTHSVFSITEDGK 24 (249)
T ss_dssp EEEEEEECSSEEEEEEESSSS
T ss_pred eEEEEEECCCeEEEEEEECCE
Confidence 379999999999999998653
No 147
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=29.28 E-value=37 Score=36.37 Aligned_cols=74 Identities=8% Similarity=0.008 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHHHHHH----HHHHcCCCCCCCceEEEecCccCcHHHHHHHHHHh----CCC-------CCCCCCchhHH
Q psy3918 297 SLVGDLIKKTVNPCQK----ALQDADCKNSDIGEVLLVGGMTRMPKVQSTVQEIF----GKV-------PSRAVNPDEAV 361 (668)
Q Consensus 297 ~l~~~l~~~i~~~i~~----~L~~a~~~~~~I~~ViLVGGssriP~V~~~l~~~F----g~~-------~~~~~npdeaV 361 (668)
.+|.-+.+|...++.. ++...+.. -..|.+-||...-|.+++.+++++ +.. .+...-.+...
T Consensus 356 ~ia~~V~~RaA~l~A~~iaai~~~~~~~---~~~V~vdGsv~~~p~f~~~l~~~l~~l~~~~~~~~~~~~v~~~~~~dgs 432 (457)
T 2yhx_A 356 RXLFLIAAYAFRLVVCXIXAICQKKGYS---SGHIAAXGSXRSYSGFSXNSATXNXNIYGWPQSAXXSKPIXITPAIDGX 432 (457)
T ss_dssp HHHHHHHHHHHHHHTHHHHHHHHHHTCS---SEEEEEESTTTTSTTHHHHHHHHHHHHHCCCCSSGGGSSEEEEECCCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCCC---cEEEEEECCcccCchHHHHHHHHHHHhhCcccccccCcceEEEECCCch
Confidence 4555566665544433 33333321 135556666655788888777665 321 11222345677
Q ss_pred HhhHHHhhhhhc
Q psy3918 362 AIGAAVQGGVLA 373 (668)
Q Consensus 362 A~GAai~aa~ls 373 (668)
-.|||+.|++-+
T Consensus 433 g~GAAl~aa~~~ 444 (457)
T 2yhx_A 433 GAASXVIXSIAS 444 (457)
T ss_dssp THHHHHHHHHHH
T ss_pred hhhHHHHHHHHh
Confidence 889999888654
No 148
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=29.16 E-value=36 Score=36.48 Aligned_cols=21 Identities=33% Similarity=0.490 Sum_probs=18.8
Q ss_pred CCceEEEEEcCCceEEEEEEe
Q psy3918 55 VKGQVIGIDLGTTNSCVAVME 75 (668)
Q Consensus 55 ~~~~vvGIDlGTt~s~vA~~~ 75 (668)
..+.++|||||.||..|++++
T Consensus 66 E~G~~lalDlGGTn~Rv~~V~ 86 (451)
T 1bdg_A 66 ETGNFLALDLGGTNYRVLSVT 86 (451)
T ss_dssp CCEEEEEEEESSSSEEEEEEE
T ss_pred ccceEEEEEeCCCeEEEEEEe
Confidence 357899999999999999986
No 149
>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa}
Probab=29.16 E-value=56 Score=32.95 Aligned_cols=49 Identities=14% Similarity=0.265 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCCCceEEEecCccCcHHHHHHHHHHhCCC
Q psy3918 299 VGDLIKKTVNPCQKALQDADCKNSDIGEVLLVGGMTRMPKVQSTVQEIFGKV 350 (668)
Q Consensus 299 ~~~l~~~i~~~i~~~L~~a~~~~~~I~~ViLVGGssriP~V~~~l~~~Fg~~ 350 (668)
+.-..+.+...++++|+++++++++|+.+++-++++++ -+.+.+.||.+
T Consensus 219 ~~~~~~~~~~~i~~aL~~agl~~~did~~~~H~~~~~~---~d~~~~~lg~~ 267 (331)
T 2x3e_A 219 FGQAVTQMSDSVRRVLDRVGWQASDLHHLVPHQANTRI---LAAVADQLDLP 267 (331)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCCCHHH---HHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHcCCC
Confidence 33345677788999999999999999999999998764 34577788754
No 150
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=28.81 E-value=38 Score=33.45 Aligned_cols=72 Identities=11% Similarity=0.159 Sum_probs=39.8
Q ss_pred eeHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCceEEEecCccCcHHHHHHHHHHhCCCCCCCCCchhHHHhhHHHhh
Q psy3918 290 LTRSKFESLVGDLIKKTVNPCQKALQDADCKNSDIGEVLLVGGMTRMPKVQSTVQEIFGKVPSRAVNPDEAVAIGAAVQG 369 (668)
Q Consensus 290 iTr~efe~l~~~l~~~i~~~i~~~L~~a~~~~~~I~~ViLVGGssriP~V~~~l~~~Fg~~~~~~~npdeaVA~GAai~a 369 (668)
+-++..+.+-.-++.-....|+..+++..-....--.|+++||.+. .+...+.. ...++|+ -+-.|..+..
T Consensus 180 ~g~nT~~ai~sGi~~g~~g~i~~~i~~~~~e~~~~~~vi~TGG~a~------~l~~~~~~--~~~~~~~-LvL~GL~~i~ 250 (268)
T 2h3g_X 180 VGKNTVSAMQSGILYGYVGQVEGIVKRMKEEAKQEPKVIATGGLAK------LISEESNV--IDVVDPF-LTLKGLYMLY 250 (268)
T ss_dssp SCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCEEEEESTTHH------HHHHHCSS--CSEECTT-HHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEECCCHH------HHHhhCCC--CCEECcc-hHHHHHHHHH
Confidence 4455666666666666666666555533211111247999999765 33334322 2335554 5666876654
Q ss_pred h
Q psy3918 370 G 370 (668)
Q Consensus 370 a 370 (668)
.
T Consensus 251 ~ 251 (268)
T 2h3g_X 251 E 251 (268)
T ss_dssp H
T ss_pred H
Confidence 3
No 151
>1msz_A DNA-binding protein smubp-2; R3H fold; NMR {Homo sapiens} SCOP: d.68.7.1
Probab=28.78 E-value=44 Score=26.93 Aligned_cols=27 Identities=19% Similarity=0.327 Sum_probs=25.4
Q ss_pred EEEeeCCCCCHHHHHHHHHHHHHcCCC
Q psy3918 194 AVITVPAYFNDSQRQATKDAGQIAGLN 220 (668)
Q Consensus 194 ~VITVPa~f~~~qR~a~~~Aa~~AGl~ 220 (668)
-.++.|+.|+..||..+.+.|+..||.
T Consensus 34 ~~l~FP~sLs~~eR~~IH~lA~~~GL~ 60 (86)
T 1msz_A 34 MQLEFPPSLNSHDRLRVHQIAEEHGLR 60 (86)
T ss_dssp SEEEECTTCCSHHHHHHHHHHHHTTEE
T ss_pred cEEEcCCCCCHHHHHHHHHHHHHcCCC
Confidence 578999999999999999999999997
No 152
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=27.93 E-value=45 Score=34.67 Aligned_cols=21 Identities=19% Similarity=0.441 Sum_probs=18.6
Q ss_pred ceEEEEEcCCceEEEEEEeCC
Q psy3918 57 GQVIGIDLGTTNSCVAVMEGK 77 (668)
Q Consensus 57 ~~vvGIDlGTt~s~vA~~~~~ 77 (668)
..++|||+|.|++.+++++.+
T Consensus 2 ~~vlgidiGgt~ik~al~d~~ 22 (381)
T 1saz_A 2 FRILTINPGSTSTKLSIFEDE 22 (381)
T ss_dssp CEEEEEEECSSEEEEEEEETT
T ss_pred CeEEEEECCccceeEEEEecc
Confidence 368999999999999999865
No 153
>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A
Probab=27.88 E-value=65 Score=32.42 Aligned_cols=47 Identities=11% Similarity=0.030 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCceEEEecCccCcHHHHHHHHHHhCCC
Q psy3918 301 DLIKKTVNPCQKALQDADCKNSDIGEVLLVGGMTRMPKVQSTVQEIFGKV 350 (668)
Q Consensus 301 ~l~~~i~~~i~~~L~~a~~~~~~I~~ViLVGGssriP~V~~~l~~~Fg~~ 350 (668)
.....+...++++|+++++++++||.+++-++++++ -+.+.+.||..
T Consensus 229 ~~~~~~~~~i~~al~~agl~~~dId~~~~H~~~~~~---~~~~~~~lg~~ 275 (335)
T 1u6e_A 229 WAAFKMGDVGRRAMDAAGVRPDQIDVFVPHQANSRI---NELLVKNLQLR 275 (335)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGCCEEEECCSCHHH---HHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHHH---HHHHHHHcCCC
Confidence 345677888999999999999999999999998764 33466777753
No 154
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=26.74 E-value=1.1e+02 Score=30.41 Aligned_cols=48 Identities=27% Similarity=0.283 Sum_probs=31.4
Q ss_pred CCceEEEecCccCc-----HHHHHHHHHHhCCCC-------CCCCCchhHHHhhHHHhhh
Q psy3918 323 DIGEVLLVGGMTRM-----PKVQSTVQEIFGKVP-------SRAVNPDEAVAIGAAVQGG 370 (668)
Q Consensus 323 ~I~~ViLVGGssri-----P~V~~~l~~~Fg~~~-------~~~~npdeaVA~GAai~aa 370 (668)
+.+.|+|-||.++. +.+++.+++++.... ..+.-.+.+.++|||.++.
T Consensus 239 dP~~IvlgG~v~~~~~~~~~~l~~~l~~~~~~~~~~~~~~i~~s~lg~~ag~~GAa~la~ 298 (310)
T 3htv_A 239 DPDAVILGGGVMDMPAFPRETLVAMTQKYLRRPLPHQVVRFIAASSSDFNGAQGAAILAH 298 (310)
T ss_dssp CCSEEEEECTTTTSTTCCHHHHHHHHHHTSCTTTTTTTCEEEECCCCTTHHHHHHHHHHH
T ss_pred CCCEEEEeCchhccchhHHHHHHHHHHHHhhcccccCCcEEEEcCCCCcHHHHHHHHHHH
Confidence 35788898888765 457777776653211 1122346789999998774
No 155
>2a01_A Apolipoprotein A-I; four-helix bundle, lipid transport; HET: AC9; 2.40A {Homo sapiens} PDB: 3k2s_A* 1av1_A 3j00_0*
Probab=26.32 E-value=76 Score=30.72 Aligned_cols=68 Identities=10% Similarity=0.184 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHHH--hhHHHHHHHHHHHHHHHHHHHHHHHHH----HHHcc---CCHHHHHHHHHHHHHHHHHHhc
Q psy3918 538 EIENMVKNAEQYAT--EDKVKRDRVEALNQAESIVHDTESKME----EFKAQ---LPAEECAKLKEQIAELQKLIAN 605 (668)
Q Consensus 538 ei~~~~~~~~~~~~--~D~~~~~~~ea~N~lE~~i~~~~~~l~----~~~~~---~~~~e~~~i~~~l~~~~~wl~~ 605 (668)
.++.+..++.-|.. .++.....++.+..|.-|.-.++.+++ +++.. ..++-+.++...++++.+|+..
T Consensus 111 ~~eelr~~L~P~~eel~~~~~~~~eel~~~L~p~~eelr~kl~~~veelk~~l~P~~ee~r~kl~~~~~el~~~l~p 187 (243)
T 2a01_A 111 EMELYRQKVEPLRAELQEGARQKLHELQEKLSPLGEEMRDRARAHVDALRTHLAPYSDELRQRLAARLEALKENGGA 187 (243)
T ss_dssp HHHHHHTTHHHHHHHHHHHHHHHHHHHCCSCCSSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhcch
Confidence 33444444443332 233333444444455445444444443 22222 2345667777888888888864
No 156
>2ra1_A Surface layer protein; triple coiled-coil, S-layer protein, protein binding, sugar protein; 2.41A {Geobacillus stearothermophilus}
Probab=25.73 E-value=2e+02 Score=29.79 Aligned_cols=55 Identities=18% Similarity=0.246 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHHHHH--HHHHccCCHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHH
Q psy3918 562 ALNQAESIVHDTESKM--EEFKAQLPAEECAKLKEQIAELQKLIANKDSVDPEELRK 616 (668)
Q Consensus 562 a~N~lE~~i~~~~~~l--~~~~~~~~~~e~~~i~~~l~~~~~wl~~~~~~~~~~~~~ 616 (668)
|.-..|+++|++.-.| ++....+.+.+..+.+..|++..+||..-.++-..++..
T Consensus 160 A~~l~~~~~y~Itv~~~~~~~~~a~~~g~l~~a~~~l~~v~~~l~kv~d~FkaeL~~ 216 (412)
T 2ra1_A 160 AQALRDRLIYDITVAMKAREAQDAVKAGNLDKAKAALDQVNQYVSKVTDAFKAELQK 216 (412)
T ss_dssp HHHHHHHTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHGGGCCSTTHHHHHH
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 4445567777777766 356677777888899999999999998854433433333
No 157
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=25.47 E-value=39 Score=34.33 Aligned_cols=21 Identities=33% Similarity=0.411 Sum_probs=18.4
Q ss_pred CceEEEEEcCCceEEEEEEeC
Q psy3918 56 KGQVIGIDLGTTNSCVAVMEG 76 (668)
Q Consensus 56 ~~~vvGIDlGTt~s~vA~~~~ 76 (668)
...++|||+|+|++.+++++.
T Consensus 29 ~~~~lgiDiGgt~i~~~l~d~ 49 (343)
T 2yhw_A 29 TLSALAVDLGGTNLRVAIVSM 49 (343)
T ss_dssp EEEEEEEEECSSEEEEEEEET
T ss_pred CcEEEEEEECCCEEEEEEECC
Confidence 357999999999999999873
No 158
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=25.32 E-value=38 Score=33.97 Aligned_cols=20 Identities=30% Similarity=0.263 Sum_probs=17.7
Q ss_pred ceEEEEEcCCceEEEEEEeC
Q psy3918 57 GQVIGIDLGTTNSCVAVMEG 76 (668)
Q Consensus 57 ~~vvGIDlGTt~s~vA~~~~ 76 (668)
..++|||+|.|++.+++++.
T Consensus 3 ~~~lgiDiGgt~i~~~l~d~ 22 (302)
T 3epq_A 3 AMLGGIEAGGTXFVCAVGRE 22 (302)
T ss_dssp CCEEEEEECSSEEEEEEECT
T ss_pred cEEEEEEECcceeEEEEEEC
Confidence 46899999999999999863
No 159
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=25.19 E-value=1.4e+02 Score=30.80 Aligned_cols=47 Identities=17% Similarity=0.196 Sum_probs=29.7
Q ss_pred CceEEEecCccCc-HHHHHHHHHHhCC------C--CCCCCCchhHHHhhHHHhhh
Q psy3918 324 IGEVLLVGGMTRM-PKVQSTVQEIFGK------V--PSRAVNPDEAVAIGAAVQGG 370 (668)
Q Consensus 324 I~~ViLVGGssri-P~V~~~l~~~Fg~------~--~~~~~npdeaVA~GAai~aa 370 (668)
.+.|+|.||.+.. |.+.+.+++.+.. . +....-.+.+.++|||.++.
T Consensus 315 P~~IvlgG~~~~~~~~l~~~l~~~l~~~~~~~~~~~i~~s~~~~~a~~~GAa~l~~ 370 (380)
T 2hoe_A 315 ISKIVIGGFFKELGENFLKKIKIEVETHLLYKHSVDMSFSKVQEPVIAFGAAVHAL 370 (380)
T ss_dssp CCEEEEEEGGGGGHHHHHHHHHHHHHHHCSSSCCCEEEECCCCSCHHHHHHHHHHH
T ss_pred CCEEEEcCchhhhhHHHHHHHHHHHHHhcCCCCCcEEEEcCCCCcHHHHHHHHHHH
Confidence 4678999988764 6666666665521 1 11122345689999998763
No 160
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=25.08 E-value=6.1e+02 Score=30.15 Aligned_cols=24 Identities=13% Similarity=0.228 Sum_probs=15.0
Q ss_pred eeCCCCCHHHHHHHHHHHHHcCCC
Q psy3918 197 TVPAYFNDSQRQATKDAGQIAGLN 220 (668)
Q Consensus 197 TVPa~f~~~qR~a~~~Aa~~AGl~ 220 (668)
++|..=+...-..++.|....||.
T Consensus 295 ~~~~~dD~~~f~~~~~A~~~lg~~ 318 (1080)
T 2dfs_A 295 VIDGIDDAKEMVNTRQACTLLGIS 318 (1080)
T ss_dssp SCTTCCHHHHHHHHHHHHHHTTCC
T ss_pred CCCCccHHHHHHHHHHHHHHcCCC
Confidence 344433334446788888888887
No 161
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=25.01 E-value=44 Score=32.61 Aligned_cols=19 Identities=32% Similarity=0.573 Sum_probs=17.6
Q ss_pred ceEEEEEcCCceEEEEEEe
Q psy3918 57 GQVIGIDLGTTNSCVAVME 75 (668)
Q Consensus 57 ~~vvGIDlGTt~s~vA~~~ 75 (668)
+.++|||+|.|++.+++++
T Consensus 12 ~~~lgidiggt~i~~~l~d 30 (267)
T 1woq_A 12 APLIGIDIGGTGIKGGIVD 30 (267)
T ss_dssp CCEEEEEECSSEEEEEEEE
T ss_pred CEEEEEEECCCEEEEEEEE
Confidence 4789999999999999997
No 162
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=24.87 E-value=1.5e+02 Score=29.45 Aligned_cols=48 Identities=19% Similarity=0.183 Sum_probs=30.0
Q ss_pred CCceEEEecCccCcH----HHHHHHHHHhCC----C---------CCCCCCchhHHHhhHHHhhh
Q psy3918 323 DIGEVLLVGGMTRMP----KVQSTVQEIFGK----V---------PSRAVNPDEAVAIGAAVQGG 370 (668)
Q Consensus 323 ~I~~ViLVGGssriP----~V~~~l~~~Fg~----~---------~~~~~npdeaVA~GAai~aa 370 (668)
+.+.|+|-||.++.+ .+++.+.+.... + +..+.-.+.|.++|||.++.
T Consensus 224 dPe~IviGGgi~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~~~~~I~~s~lg~~a~l~GAa~l~~ 288 (302)
T 3epq_A 224 APXXIILGGGVMQQXQVFSYIYQYVPKIMNSYLDFSELSDDISDYIVPPRLGSNAGIIGTLVLAH 288 (302)
T ss_dssp CCSCEEEESSGGGCTHHHHHHHHHHHHHHTTCSCCGGGTTTGGGTEECCTTGGGHHHHHHHHHHH
T ss_pred CchhhhcCchhhhhHHHHHHHHHHHHHHHhhhccCcccccccCceEEECCcCChHHHHHHHHHHH
Confidence 357889989888754 455555554321 1 11233356799999998764
No 163
>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans}
Probab=24.59 E-value=83 Score=31.80 Aligned_cols=51 Identities=12% Similarity=0.081 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCCCceEEEecCccCcHHHHHHHHHHhCCCC
Q psy3918 298 LVGDLIKKTVNPCQKALQDADCKNSDIGEVLLVGGMTRMPKVQSTVQEIFGKVP 351 (668)
Q Consensus 298 l~~~l~~~i~~~i~~~L~~a~~~~~~I~~ViLVGGssriP~V~~~l~~~Fg~~~ 351 (668)
++...++.+.+.++++|++++++.++|+.+++-.+..+ +-+.+.+.++.+.
T Consensus 228 v~~~~~~~~~~~i~~~l~~~gl~~~did~~~~Hq~~~~---i~~~~~~~lgl~~ 278 (333)
T 4dfe_A 228 VFKLAVNVLEKVAVEALEKANLSAEQIDWLIPHQANIR---IMQSTCRKLGLPQ 278 (333)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCGGGCSEEEECCSCHH---HHHHHHHHTTCCG
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHH---HHHHHHHHhCCCH
Confidence 44556677788999999999999999999999988765 4467777787543
No 164
>3lay_A Zinc resistance-associated protein; salmonella typhimurium L structural genomics, center for structural genomics of INFE diseases; 2.70A {Salmonella enterica subsp}
Probab=24.53 E-value=4e+02 Score=24.23 Aligned_cols=19 Identities=21% Similarity=0.260 Sum_probs=12.0
Q ss_pred CCCHHHHHHHHHHHHHHHH
Q psy3918 533 GLSKDEIENMVKNAEQYAT 551 (668)
Q Consensus 533 ~ls~~ei~~~~~~~~~~~~ 551 (668)
.||+|+.+.+.+-.+++..
T Consensus 67 nLT~EQq~ql~~I~~e~r~ 85 (175)
T 3lay_A 67 PLTTEQQATAQKIYDDYYT 85 (175)
T ss_dssp -CCHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHH
Confidence 5888887777665555443
No 165
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=24.34 E-value=43 Score=33.64 Aligned_cols=21 Identities=24% Similarity=0.434 Sum_probs=18.5
Q ss_pred CceEEEEEcCCceEEEEEEeC
Q psy3918 56 KGQVIGIDLGTTNSCVAVMEG 76 (668)
Q Consensus 56 ~~~vvGIDlGTt~s~vA~~~~ 76 (668)
...++|||+|.|++.+++++.
T Consensus 6 ~~~~lgiDiGgt~i~~~l~d~ 26 (310)
T 3htv_A 6 HNVVAGVDMGATHIRFCLRTA 26 (310)
T ss_dssp EEEEEEEEECSSEEEEEEEET
T ss_pred CCEEEEEEeCCCEEEEEEECC
Confidence 457999999999999999873
No 166
>2f9w_A Pantothenate kinase; COAA, transferase; HET: PAU; 1.90A {Pseudomonas aeruginosa} SCOP: c.55.1.13 c.55.1.13 PDB: 2f9t_A*
Probab=24.26 E-value=53 Score=32.53 Aligned_cols=21 Identities=19% Similarity=0.303 Sum_probs=18.4
Q ss_pred eEEEEEcCCceEEEEEEe-CCe
Q psy3918 58 QVIGIDLGTTNSCVAVME-GKQ 78 (668)
Q Consensus 58 ~vvGIDlGTt~s~vA~~~-~~~ 78 (668)
.++.||.|+|++++++++ ++.
T Consensus 24 M~L~IDiGNT~ik~g~~~~~~~ 45 (271)
T 2f9w_A 24 MILELDCGNSLIKWRVIEGAAR 45 (271)
T ss_dssp EEEEEEECSSCEEEEEEETTTE
T ss_pred cEEEEEeCCCeeEEEEEeCCCE
Confidence 579999999999999998 553
No 167
>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A
Probab=23.99 E-value=76 Score=32.95 Aligned_cols=49 Identities=16% Similarity=0.122 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCCCceEEEecCccCcHHHHHHHHHHhCCC
Q psy3918 299 VGDLIKKTVNPCQKALQDADCKNSDIGEVLLVGGMTRMPKVQSTVQEIFGKV 350 (668)
Q Consensus 299 ~~~l~~~i~~~i~~~L~~a~~~~~~I~~ViLVGGssriP~V~~~l~~~Fg~~ 350 (668)
.....+.+...++++|+++++++++||.+++-++++++ -+.+.+.+|.+
T Consensus 282 ~~~~~~~~~~~i~~aL~~agl~~~dId~~~~H~~~~~i---~d~~~~~lgl~ 330 (393)
T 1ted_A 282 PGYIFSGVAPVVTEMLWDNGLQISDIDLWAIHPGGPKI---IEQSVRSLGIS 330 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCGGGCSCEEECCSCHHH---HHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHhHCCEEEECCCcHHH---HHHHHHHcCCC
Confidence 34456677788999999999999999999999988664 34567777654
No 168
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=23.81 E-value=53 Score=33.23 Aligned_cols=18 Identities=22% Similarity=0.344 Sum_probs=16.8
Q ss_pred eEEEEEcCCceEEEEEEe
Q psy3918 58 QVIGIDLGTTNSCVAVME 75 (668)
Q Consensus 58 ~vvGIDlGTt~s~vA~~~ 75 (668)
.++|||+|.|++.+++++
T Consensus 25 ~~lgiDiGgt~i~~~l~d 42 (327)
T 4db3_A 25 MYYGFDVGGTKIEFGAFN 42 (327)
T ss_dssp CEEEEEECSSEEEEEEEC
T ss_pred EEEEEEECCCEEEEEEEe
Confidence 689999999999999986
No 169
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=23.25 E-value=46 Score=34.78 Aligned_cols=21 Identities=5% Similarity=0.069 Sum_probs=18.6
Q ss_pred CceEEEEEcCCceEEEEEEeC
Q psy3918 56 KGQVIGIDLGTTNSCVAVMEG 76 (668)
Q Consensus 56 ~~~vvGIDlGTt~s~vA~~~~ 76 (668)
...++|||+|+|++.+++++-
T Consensus 84 ~~~~lgiDiG~t~i~~~l~d~ 104 (406)
T 1z6r_A 84 AWHYLSLRISRGEIFLALRDL 104 (406)
T ss_dssp TCEEEEEEEETTEEEEEEEET
T ss_pred ccEEEEEEEcCCEEEEEEEcC
Confidence 468999999999999999973
No 170
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=23.15 E-value=39 Score=33.38 Aligned_cols=18 Identities=28% Similarity=0.385 Sum_probs=16.7
Q ss_pred eEEEEEcCCceEEEEEEe
Q psy3918 58 QVIGIDLGTTNSCVAVME 75 (668)
Q Consensus 58 ~vvGIDlGTt~s~vA~~~ 75 (668)
.++|||+|.|++.+++++
T Consensus 5 ~~lgidiggt~i~~~l~d 22 (292)
T 2gup_A 5 TIATIDIGGTGIKFASLT 22 (292)
T ss_dssp CEEEEEEETTEEEEEEEC
T ss_pred EEEEEEECCCEEEEEEEC
Confidence 589999999999999986
No 171
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=22.49 E-value=42 Score=34.82 Aligned_cols=21 Identities=14% Similarity=0.377 Sum_probs=18.4
Q ss_pred CceEEEEEcCCceEEEEEEeC
Q psy3918 56 KGQVIGIDLGTTNSCVAVMEG 76 (668)
Q Consensus 56 ~~~vvGIDlGTt~s~vA~~~~ 76 (668)
...++|||+|.|++.+++++-
T Consensus 86 ~~~~lGIDiGgt~i~~~l~d~ 106 (380)
T 2hoe_A 86 CAYVLGIEVTRDEIAACLIDA 106 (380)
T ss_dssp GCEEEEEEECSSEEEEEEEET
T ss_pred CCeEEEEEECCCEEEEEEECC
Confidence 457999999999999999873
No 172
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=22.29 E-value=55 Score=35.36 Aligned_cols=21 Identities=33% Similarity=0.575 Sum_probs=18.8
Q ss_pred CCceEEEEEcCCceEEEEEEe
Q psy3918 55 VKGQVIGIDLGTTNSCVAVME 75 (668)
Q Consensus 55 ~~~~vvGIDlGTt~s~vA~~~ 75 (668)
..+..+|||||.||..|+.++
T Consensus 78 E~G~~LalDlGGTn~Rv~~V~ 98 (485)
T 3o8m_A 78 ETGDFLALDLGGTNLRVVLVK 98 (485)
T ss_dssp CEEEEEEEEESSSEEEEEEEE
T ss_pred cceEEEEEEecCCeEEEEEEE
Confidence 457899999999999999985
No 173
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=22.15 E-value=53 Score=33.84 Aligned_cols=21 Identities=14% Similarity=0.118 Sum_probs=18.4
Q ss_pred CceEEEEEcCCceEEEEEEeC
Q psy3918 56 KGQVIGIDLGTTNSCVAVMEG 76 (668)
Q Consensus 56 ~~~vvGIDlGTt~s~vA~~~~ 76 (668)
+..++|||+|.|++.+++++.
T Consensus 28 ~~~~lgiDiGgt~i~~~l~d~ 48 (373)
T 2q2r_A 28 APLTFVGDVGGTSARMGFVRE 48 (373)
T ss_dssp SCEEEEEEECSSEEEEEEEEE
T ss_pred CCeEEEEEEccccEEEEEEec
Confidence 457999999999999999863
No 174
>1m1j_B Fibrinogen beta chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_B*
Probab=21.90 E-value=7.2e+02 Score=26.35 Aligned_cols=13 Identities=31% Similarity=0.363 Sum_probs=6.0
Q ss_pred HHHHHHHHHHHHH
Q psy3918 613 ELRKATTTLQQAS 625 (668)
Q Consensus 613 ~~~~~~~~L~~~~ 625 (668)
.++.+++.|+...
T Consensus 179 ~l~~ki~~l~~~~ 191 (464)
T 1m1j_B 179 SLHKKIQKLENAI 191 (464)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3444444454443
No 175
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=21.60 E-value=51 Score=33.22 Aligned_cols=22 Identities=27% Similarity=0.570 Sum_probs=18.0
Q ss_pred CCceEEEEEcCCceEEEEEEeC
Q psy3918 55 VKGQVIGIDLGTTNSCVAVMEG 76 (668)
Q Consensus 55 ~~~~vvGIDlGTt~s~vA~~~~ 76 (668)
....+||||+|.|++.+++++.
T Consensus 17 ~~~~~lgidiggt~i~~~l~d~ 38 (321)
T 3r8e_A 17 FQGMILGIDVGGTSVKFGLVTP 38 (321)
T ss_dssp --CCEEEEECCSSEEEEEEECT
T ss_pred cCcEEEEEEECCCEEEEEEEcC
Confidence 3568999999999999999863
No 176
>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis}
Probab=21.22 E-value=70 Score=33.09 Aligned_cols=21 Identities=29% Similarity=0.479 Sum_probs=18.7
Q ss_pred CceEEEEEcCCceEEEEEEeC
Q psy3918 56 KGQVIGIDLGTTNSCVAVMEG 76 (668)
Q Consensus 56 ~~~vvGIDlGTt~s~vA~~~~ 76 (668)
...++|||+|.|++.++++++
T Consensus 8 ~~~~lgiDIGgt~i~~~l~d~ 28 (366)
T 3mcp_A 8 NRIVMTLDAGGTNFVFSAIQG 28 (366)
T ss_dssp CCEEEEEECSSSEEEEEEEET
T ss_pred CCEEEEEEECcceEEEEEEEC
Confidence 457999999999999999983
No 177
>2hc5_A ORF 99, hypothetical protein YVYC; NESG, GFT-PSI, protein structure initiative, northeast structural genomics consortium, alpha-beta, FLAG; NMR {Bacillus subtilis} SCOP: d.352.1.1
Probab=21.11 E-value=1.2e+02 Score=25.89 Aligned_cols=45 Identities=7% Similarity=0.138 Sum_probs=34.1
Q ss_pred eEEEEEeCC-CceEEEEeeecCCCceeEEEEccCCCCCHHHHHHHHHHHHHHH
Q psy3918 499 IEVTFDIDA-NGIVHVSARDKGTGKEQQIVIQSSGGLSKDEIENMVKNAEQYA 550 (668)
Q Consensus 499 i~v~f~id~-~Gil~v~a~~~~t~~~~~~~i~~~~~ls~~ei~~~~~~~~~~~ 550 (668)
..+.|.+|. .|.+.|+..|..||+.. ..++++++-++.+++.++.
T Consensus 56 ~~L~F~vdee~~~~vVkVvD~~TgEVI-------RqIPpEe~L~l~~~l~e~~ 101 (117)
T 2hc5_A 56 VHLKFELHDKLNEYYVKVIEDSTNEVI-------REIPPKRWLDFYAAMTEFL 101 (117)
T ss_dssp CCEEEEEEEETTEEEEEEEETTTTEEE-------EEECHHHHHHHHHHHHHHH
T ss_pred CceEEEEecCCCcEEEEEEECCCCcEE-------EeCChHHHHHHHHHHHHhh
Confidence 468888875 58899999999998763 1358888888877766553
No 178
>3nuw_A 2-OXO-3-deoxygalactonate kinase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.09A {Klebsiella pneumoniae} PDB: 3r1x_A*
Probab=21.05 E-value=65 Score=32.27 Aligned_cols=43 Identities=23% Similarity=0.285 Sum_probs=30.2
Q ss_pred ceEEEecCccCcHHHHHHHHHHhCCCCCCCCCchhHHHhhHHHhh
Q psy3918 325 GEVLLVGGMTRMPKVQSTVQEIFGKVPSRAVNPDEAVAIGAAVQG 369 (668)
Q Consensus 325 ~~ViLVGGssriP~V~~~l~~~Fg~~~~~~~npdeaVA~GAai~a 369 (668)
..|.|||........+..|+ .+|.+ ....++++++..|....+
T Consensus 248 ~~v~LiG~~~L~~~Y~~AL~-~~G~~-~~~~d~~~~~~~GL~~~~ 290 (295)
T 3nuw_A 248 QAISLVAGSSLTSRYQQAFA-AIGRE-VSAVAGDTAFQTGIRSIA 290 (295)
T ss_dssp SCEEEEECHHHHHHHHHHHH-HTTCC-EEEEEHHHHHHHHHHHHH
T ss_pred CeEEEEeCHHHHHHHHHHHH-HcCCC-ceecCHHHHHHHHHHHHH
Confidence 57999999877777777765 46663 234588888888865433
No 179
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=20.96 E-value=50 Score=34.81 Aligned_cols=21 Identities=24% Similarity=0.218 Sum_probs=18.6
Q ss_pred CceEEEEEcCCceEEEEEEeC
Q psy3918 56 KGQVIGIDLGTTNSCVAVMEG 76 (668)
Q Consensus 56 ~~~vvGIDlGTt~s~vA~~~~ 76 (668)
...++|||+|+|++.+++++-
T Consensus 107 ~~~~lGIDiGgt~i~~~l~d~ 127 (429)
T 1z05_A 107 GWQFLSMRLGRGYLTIALHEL 127 (429)
T ss_dssp TEEEEEEEEETTEEEEEEEET
T ss_pred CCEEEEEEECCCEEEEEEECC
Confidence 468999999999999999873
No 180
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=20.91 E-value=52 Score=32.33 Aligned_cols=18 Identities=28% Similarity=0.519 Sum_probs=16.6
Q ss_pred eEEEEEcCCceEEEEEEe
Q psy3918 58 QVIGIDLGTTNSCVAVME 75 (668)
Q Consensus 58 ~vvGIDlGTt~s~vA~~~ 75 (668)
.++|||+|.|++.+++++
T Consensus 2 ~~lgidiggt~~~~~l~d 19 (289)
T 2aa4_A 2 TTLAIDIGGTKLAAALIG 19 (289)
T ss_dssp CEEEEEECSSEEEEEEEC
T ss_pred eEEEEEeCCCEEEEEEEC
Confidence 589999999999999986
No 181
>4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665}
Probab=20.78 E-value=84 Score=31.93 Aligned_cols=46 Identities=24% Similarity=0.364 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHcCCCCCCCceEEEecCcc--CcHHHHHHHHHHhCCCC
Q psy3918 306 TVNPCQKALQDADCKNSDIGEVLLVGGMT--RMPKVQSTVQEIFGKVP 351 (668)
Q Consensus 306 i~~~i~~~L~~a~~~~~~I~~ViLVGGss--riP~V~~~l~~~Fg~~~ 351 (668)
..+..+++|+++++++++||.|+++.-+. .+|..--+|.+.+|...
T Consensus 66 a~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~v~~~LGl~~ 113 (350)
T 4ewp_A 66 AVGAAREALERAGLQGSDLDAVIVSTVTFPHATPSAAALVAHEIGATP 113 (350)
T ss_dssp HHHHHHHHHHHTTCCGGGCSEEEEECSCCSCSSSCHHHHHHHHTTCTT
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCCchHHHHHHHhCCCC
Confidence 45678899999999999999998876543 57999999999998654
No 182
>3zsu_A TLL2057 protein, cyanoq; photosystem II assembly, photosynthesis, extrinsic protein; 1.60A {Thermosynechococcus elongatus}
Probab=20.78 E-value=1.4e+02 Score=25.87 Aligned_cols=73 Identities=15% Similarity=0.099 Sum_probs=45.0
Q ss_pred CCCHHHHHHHHHHHHHHHHhhH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHH
Q psy3918 533 GLSKDEIENMVKNAEQYATEDK---------VKRDRVEALNQAESIVHDTESKMEEFKAQLPAEECAKLKEQIAELQKLI 603 (668)
Q Consensus 533 ~ls~~ei~~~~~~~~~~~~~D~---------~~~~~~ea~N~lE~~i~~~~~~l~~~~~~~~~~e~~~i~~~l~~~~~wl 603 (668)
..|+++|+.+......+.+.-. ..+...+.+|-+-+=+..+|..|......+.+.++.+..+...++.+-|
T Consensus 14 tysp~~i~~iq~y~~~i~~~r~Rl~eL~~lI~~~~W~~~Rn~IhGPlg~lr~~m~~l~~~Llp~dqk~A~~lak~l~~~L 93 (130)
T 3zsu_A 14 TYSELQITRIQDYLRDIEKNAERFADLEVSVAKGDWQEARNIMRGPLGEMLMDMRALNRNLLAKDQPTPTALTRALTDDF 93 (130)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCHHHHHHHHHTHHHHHHHHHHHHHHTSCGGGSHHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHhchHHHHHHHHHHHHHhcCHhhHHHHHHHHHHHHHHH
Confidence 4688888877666665543221 1223445566666666677777766666666666666666666666555
Q ss_pred hc
Q psy3918 604 AN 605 (668)
Q Consensus 604 ~~ 605 (668)
+.
T Consensus 94 ~~ 95 (130)
T 3zsu_A 94 LK 95 (130)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 183
>2e1z_A Propionate kinase; TDCD, native, acetate kinase, nucleotide, AP4A, ADP, ATP, AMPPNP, transferase; HET: B4P; 1.98A {Salmonella typhimurium} SCOP: c.55.1.2 c.55.1.2 PDB: 1x3n_A* 2e1y_A 1x3m_A* 2e20_A*
Probab=20.53 E-value=1.7e+02 Score=30.74 Aligned_cols=26 Identities=15% Similarity=0.354 Sum_probs=23.8
Q ss_pred CCCceEEEecCcc-CcHHHHHHHHHHh
Q psy3918 322 SDIGEVLLVGGMT-RMPKVQSTVQEIF 347 (668)
Q Consensus 322 ~~I~~ViLVGGss-riP~V~~~l~~~F 347 (668)
..+|.|+++||-. ..+.|++.+.+.+
T Consensus 329 ggvDaIVFTgGIGEns~~vR~~i~~~l 355 (415)
T 2e1z_A 329 HRLDGIIFTGGIGENSVLIRQLVIEHL 355 (415)
T ss_dssp SSCCEEEEEHHHHHHCHHHHHHHHHTT
T ss_pred CCCCEEEECccccccCHHHHHHHHhhH
Confidence 5699999999999 9999999999866
No 184
>1vh6_A Flagellar protein FLIS; structural genomics, unknown function; HET: MSE; 2.50A {Bacillus subtilis} SCOP: a.24.19.1
Probab=20.23 E-value=4.4e+02 Score=23.12 Aligned_cols=24 Identities=17% Similarity=0.264 Sum_probs=16.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q psy3918 555 VKRDRVEALNQAESIVHDTESKME 578 (668)
Q Consensus 555 ~~~~~~ea~N~lE~~i~~~~~~l~ 578 (668)
...++.+..+....+|..++..|.
T Consensus 48 d~~~k~~~i~KA~~Ii~eL~~sLd 71 (145)
T 1vh6_A 48 DMERKNENLIKAQNIIQELNFTLN 71 (145)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHcC
Confidence 344556667777777777777774
Done!