RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy3918
(668 letters)
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding,
protein folding, acetylation, ATP-binding, cell inner
membrane; NMR {Escherichia coli}
Length = 605
Score = 937 bits (2423), Expect = 0.0
Identities = 323/645 (50%), Positives = 409/645 (63%), Gaps = 107/645 (16%)
Query: 57 GQVIGIDLGTTNSCVAVMEGKQAKVIENSEGSRTTPSVVAFTKDGERLVGTPARRQAVTN 116
G++IGIDLGTTNSCVA+M+G +V+EN+EG RTTPS++A+T+DGE LVG PA+RQAVTN
Sbjct: 2 GKIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTN 61
Query: 117 SANTFYATKRLIGRRFDDPEIKKDMKNLSYKIVRASNGDAWVQGSDEKVYSPSQIGAFVL 176
NT +A KRLIGRRF D E+++D+ + +KI+ A NGDAWV+ + +P QI A VL
Sbjct: 62 PQNTLFAIKRLIGRRFQDEEVQRDVSIMPFKIIAADNGDAWVE-VKGQKMAPPQISAEVL 120
Query: 177 MKMKETSEAFLNTSVKNAVITVPAYFNDSQRQATKDAGQIAGLN---------------- 220
KMK+T+E +L V AVITVPAYFND+QRQATKDAG+IAGL
Sbjct: 121 KKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYG 180
Query: 221 --------------------------------KGVFEVKSTNGDTLLGGE---------- 238
+ FEV +TNGDT LGGE
Sbjct: 181 LDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYL 240
Query: 239 --------GLDIRKDQMAMQRLKEAAEKAKIELSSSVQTDINLPYLTMDAGGPKHMNLKL 290
G+D+R D +AMQRLKEAAEKAKIELSS+ QTD+NLPY+T DA GPKHMN+K+
Sbjct: 241 VEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKV 300
Query: 291 TRSKFESLVGDLIKKTVNPCQKALQDADCKNSDIGEVLLVGGMTRMPKVQSTVQEIFGKV 350
TR+K ESLV DL+ +++ P + ALQDA SDI +V+LVGG TRMP VQ V E FGK
Sbjct: 301 TRAKLESLVEDLVNRSIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKE 360
Query: 351 PSRAVNPDEAVAIGAAVQGGVLAGDVTDVLLLDVTPLSLGIETLGGVFTRLITRNTTIPT 410
P + VNPDEAVAIGAAVQGGVL GDV DVLLLDVTPLSLGIET+GGV T LI +NTTIPT
Sbjct: 361 PRKDVNPDEAVAIGAAVQGGVLTGDVKDVLLLDVTPLSLGIETMGGVMTTLIAKNTTIPT 420
Query: 411 KKSQGGVLAGDVTDVLLLDVTPLSLGIETLGGVFTRLITRNTTIPTKKSQTQVEIKVHQG 470
K SQ A D +Q+ V I V QG
Sbjct: 421 KHSQVFSTAED-------------------------------------NQSAVTIHVLQG 443
Query: 471 EREMAADNKLLGQFTLVGIPPAPRGVPQIEVTFDIDANGIVHVSARDKGTGKEQQIVIQS 530
ER+ AADNK LGQF L GI PAPRG+PQIEVTFDIDA+GI+HVSA+DK +GKEQ+I I++
Sbjct: 444 ERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKA 503
Query: 531 SGGLSKDEIENMVKNAEQYATEDKVKRDRVEALNQAESIVHDTESKMEEFKAQLPAEECA 590
S GL++DEI+ MV++AE A D+ + V+ NQ + ++H T ++EE +LPA++
Sbjct: 504 SSGLNEDEIQKMVRDAEANAEADRKFDELVQTRNQGDHLLHSTRKQVEEAGDKLPADDKT 563
Query: 591 KLKEQIAELQKLIANKDSVDPEELRKATTTLQQASLKLFEMAYKK 635
++ + L+ + + D + L Q S KL E+A ++
Sbjct: 564 AIESALTALETALKGE---DKAAIEAKMQELAQVSQKLMEIAQQQ 605
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain
rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus
HTA426}
Length = 509
Score = 783 bits (2025), Expect = 0.0
Identities = 275/572 (48%), Positives = 346/572 (60%), Gaps = 125/572 (21%)
Query: 57 GQVIGIDLGTTNSCVAVMEGKQAKVIENSEGSRTTPSVVAFTKDGERLVGTPARRQAVTN 116
++IGIDLGTTNSCVAV+EG + KVI N EG+RTTPSVVAF K+GERLVG A+RQA+TN
Sbjct: 2 SKIIGIDLGTTNSCVAVLEGGEVKVIPNPEGNRTTPSVVAF-KNGERLVGEVAKRQAITN 60
Query: 117 SANTFYATKRLIGRRFDDPEIKKDMKNLSYKIVRASNGDAWVQGSDEKVYSPSQIGAFVL 176
NT + KR +G + V+ + K Y+P +I A +L
Sbjct: 61 -PNTIISIKRHMGTDY------------------------KVE-IEGKQYTPQEISAIIL 94
Query: 177 MKMKETSEAFLNTSVKNAVITVPAYFNDSQRQATKDAGQIAGLN---------------- 220
+K +E +L V AVITVPAYFND+QRQATKDAG+IAGL
Sbjct: 95 QYLKSYAEDYLGEPVTRAVITVPAYFNDAQRQATKDAGRIAGLEVERIINEPTAAALAYG 154
Query: 221 ---------------------------KGVFEVKSTNGDTLLGGE--------------- 238
GVFEVK+T GD LGG+
Sbjct: 155 LDKEEDQTILVYDLGGGTFDVSILELGDGVFEVKATAGDNHLGGDDFDQVIIDYLVNQFK 214
Query: 239 ---GLDIRKDQMAMQRLKEAAEKAKIELSSSVQTDINLPYLTMDAGGPKHMNLKLTRSKF 295
G+D+ KD+MA+QRLK+AAEKAK ELS QT I+LP+++ + GP H+ + LTR+KF
Sbjct: 215 QEHGIDLSKDKMALQRLKDAAEKAKKELSGVTQTQISLPFISANENGPLHLEMTLTRAKF 274
Query: 296 ESLVGDLIKKTVNPCQKALQDADCKNSDIGEVLLVGGMTRMPKVQSTVQEIFGKVPSRAV 355
E L L+++T+ P ++ALQDA +DI +V+LVGG TR+P VQ ++ GK P + V
Sbjct: 275 EELSAHLVERTMGPVRQALQDAGLTPADIDKVILVGGSTRIPAVQEAIKRELGKEPHKGV 334
Query: 356 NPDEAVAIGAAVQGGVLAGDVTDVLLLDVTPLSLGIETLGGVFTRLITRNTTIPTKKSQG 415
NPDE VAIGAA+QGGV+AG+V DV+LLDVTPLSLGIET+GGVFT+LI RNTTIPT KSQ
Sbjct: 335 NPDEVVAIGAAIQGGVIAGEVKDVVLLDVTPLSLGIETMGGVFTKLIERNTTIPTSKSQV 394
Query: 416 GVLAGDVTDVLLLDVTPLSLGIETLGGVFTRLITRNTTIPTKKSQTQVEIKVHQGEREMA 475
A D +QT V+I V QGER MA
Sbjct: 395 FTTAAD-------------------------------------NQTTVDIHVLQGERPMA 417
Query: 476 ADNKLLGQFTLVGIPPAPRGVPQIEVTFDIDANGIVHVSARDKGTGKEQQIVIQSSGGLS 535
ADNK LG+F L GIPPAPRGVPQIEVTFDIDANGIVHV A+D GT KEQ I I+SS GLS
Sbjct: 418 ADNKSLGRFQLTGIPPAPRGVPQIEVTFDIDANGIVHVRAKDLGTNKEQSITIKSSSGLS 477
Query: 536 KDEIENMVKNAEQYATEDKVKRDRVEALNQAE 567
++EI+ M+K AE+ A D+ +++ E N+A+
Sbjct: 478 EEEIQRMIKEAEENAEADRKRKEAAELRNEAD 509
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus}
SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Length = 554
Score = 783 bits (2025), Expect = 0.0
Identities = 265/594 (44%), Positives = 344/594 (57%), Gaps = 113/594 (19%)
Query: 56 KGQVIGIDLGTTNSCVAVMEGKQAKVIENSEGSRTTPSVVAFTKDGERLVGTPARRQAVT 115
KG +GIDLGTT SCV V + + ++I N +G+RTTPS VAFT D ERL+G A+ Q
Sbjct: 3 KGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAM 61
Query: 116 NSANTFYATKRLIGRRFDDPEIKKDMKNLSYKIV-RASNGDAWVQ-GSDEKVYSPSQIGA 173
N NT + KRLIGRRFDD ++ DMK+ + +V A V+ + K + P ++ +
Sbjct: 62 NPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSS 121
Query: 174 FVLMKMKETSEAFLNTSVKNAVITVPAYFNDSQRQATKDAGQIAGLN------------- 220
VL KMKE +EA+L +V NAV+TVPAYFNDSQRQATKDAG IAGLN
Sbjct: 122 MVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAI 181
Query: 221 --------------------------------KGVFEVKSTNGDTLLGGE---------- 238
G+FEVKST GDT LGGE
Sbjct: 182 AYGLDKKVGAERNVLIFDLGGGTFDVSILTIAAGIFEVKSTAGDTHLGGEDFDNRMVNHF 241
Query: 239 --------GLDIRKDQMAMQRLKEAAEKAKIELSSSVQTDINLPYLTMDAGGPKHMNLKL 290
DI +++ A++RL+ A E+AK LSSS Q I + L +
Sbjct: 242 IAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGI----DFYTSI 297
Query: 291 TRSKFESLVGDLIKKTVNPCQKALQDADCKNSDIGEVLLVGGMTRMPKVQSTVQEIF-GK 349
TR++FE L DL + T++P +KAL+DA S I +++LVGG TR+PK+Q +Q+ F GK
Sbjct: 298 TRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGK 357
Query: 350 VPSRAVNPDEAVAIGAAVQGGVLAGD----VTDVLLLDVTPLSLGIETLGGVFTRLITRN 405
++++NPDEAVA GAAVQ +L+GD V D+LLLDVTPLSLGIET GGV T LI RN
Sbjct: 358 ELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRN 417
Query: 406 TTIPTKKSQGGVLAGDVTDVLLLDVTPLSLGIETLGGVFTRLITRNTTIPTKKSQTQVEI 465
TTIPTK++Q FT +Q V I
Sbjct: 418 TTIPTKQTQ----------------------------TFT---------TYSDNQPGVLI 440
Query: 466 KVHQGEREMAADNKLLGQFTLVGIPPAPRGVPQIEVTFDIDANGIVHVSARDKGTGKEQQ 525
+V++GER M DN LLG+F L GIPPAPRGVPQIEVTFDIDANGI++VSA DK TGKE +
Sbjct: 441 QVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENK 500
Query: 526 IVIQSSGG-LSKDEIENMVKNAEQYATEDKVKRDRVEALNQAESIVHDTESKME 578
I I + G LSK++IE MV+ AE+Y ED+ +RD+V + N ES + ++ +E
Sbjct: 501 ITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVE 554
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor,
protein folding, ATP-binding, Ca binding, chaperone,
nucleotide-binding, phosphoprotein; HET: ATP; 2.30A
{Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Length = 675
Score = 685 bits (1770), Expect = 0.0
Identities = 133/702 (18%), Positives = 251/702 (35%), Gaps = 137/702 (19%)
Query: 57 GQVIGIDLGTTNSCVAVMEGKQAKVIENSEGSRTTPSVVAFTKDGERLVGTPARRQAVTN 116
G+DLG NS +AV + ++ N +R+TPSVV F R +G + + +N
Sbjct: 2 STPFGLDLGNNNSVLAVARNRGIDIVVNEVSNRSTPSVVGFG-PKNRYLGETGKNKQTSN 60
Query: 117 SANTFYATKRLIGRRFDDPEIKKDMKNLSYKIVRASNGDAWVQ---GSDEKVYSPSQIGA 173
NT KR+IG + P+ +++ K+ + K+V + + ++ V+S +Q+ A
Sbjct: 61 IKNTVANLKRIIGLDYHHPDFEQESKHFTSKLVELDDKKTGAEVRFAGEKHVFSATQLAA 120
Query: 174 FVLMKMKETSEAFLNTSVKNAVITVPAYFNDSQRQATKDAGQIAGLN------------- 220
+ K+K+T + ++ + I VP ++ + QR DA +IAGLN
Sbjct: 121 MFIDKVKDTVKQDTKANITDVCIAVPPWYTEEQRYNIADAARIAGLNPVRIVNDVTAAGV 180
Query: 221 -------------------------------------KGVFEVKSTNGDTLLGGE----- 238
KG +V T D GG
Sbjct: 181 SYGIFKTDLPEGEEKPRIVAFVDIGHSSYTCSIMAFKKGQLKVLGTACDKHFGGRDFDLA 240
Query: 239 -------------GLDIRKDQMAMQRLKEAAEKAKIELSSSVQTDINLPYLTMDAGGPKH 285
+DIR++ A R+ AAEK K LS++ ++ +
Sbjct: 241 ITEHFADEFKTKYKIDIRENPKAYNRILTAAEKLKKVLSANTNAPFSVESVM----NDVD 296
Query: 286 MNLKLTRSKFESLVGDLIKKTVNPCQKALQDADCKNSDIGEVLLVGGMTRMPKVQSTVQE 345
++ +L+R + E LV L+++ P KAL A ++ V ++GG TR+P ++ ++ E
Sbjct: 297 VSSQLSREELEELVKPLLERVTEPVTKALAQAKLSAEEVDFVEIIGGTTRIPTLKQSISE 356
Query: 346 IFGKVPSRAVNPDEAVAIGAAVQGGVLAGD--VTDVLLLDVTPLSLGIETLGGV----FT 399
FGK S +N DEA+A GAA + + V D+ P S+ V
Sbjct: 357 AFGKPLSTTLNQDEAIAKGAAFICAIHSPTLRVRPFKFEDIHPYSVSYSWDKQVEDEDHM 416
Query: 400 RLITRNTTIPTKKSQGGVLAGDVTDVLLLDVTPLSLGIETLGGVFTRLITRNTTIPTKKS 459
+ ++ P+ K R T
Sbjct: 417 EVFPAGSSFPSTKLI----------------------------TLNR---------TGDF 439
Query: 460 QTQVEIKVHQGEREMAADNKLLGQFTLVGI--PPAPRGVPQIEVTFDIDANGIVHVS--- 514
+ + + + G+ P VP +++ D +G+ +
Sbjct: 440 SMAASYTDITQLPPNTPEQ--IANWEITGVQLPEGQDSVP-VKLKLRCDPSGLHTIEEAY 496
Query: 515 -------ARDKGTGKEQQIVIQ-SSGGLSKDEIENMVKNAEQYATEDKVKRDRVEALNQA 566
D T K+ + I + GL ++ +++ + +DK+ + + N
Sbjct: 497 TIEDIEAGSDTKTVKKDDLTIVAHTFGLDAKKLNELIEKENEMLAQDKLVAETEDRKNTL 556
Query: 567 ESIVHDTESKMEE-FKAQLPAEECAKLKEQIAELQK-LIANKDSVDPEELRKATTTLQQA 624
E ++ K+EE + E KL+ + + ++ L + L
Sbjct: 557 EEYIYTLRGKLEEEYAPFASDAEKTKLQGMLNKAEEWLYDEGFDSIKAKYIAKYEELASL 616
Query: 625 SLKLFEMAYKKMAAEKESSSGSSSSGSSDQTQSQEEDKKKED 666
+ K +K++ + + ++K +
Sbjct: 617 GNIIRGRYLAKEEEKKQAIRSKQEASQMAAMAEKLAAQRKAE 658
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor,
coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia
coli} SCOP: c.55.1.1 c.55.1.1
Length = 383
Score = 600 bits (1550), Expect = 0.0
Identities = 205/382 (53%), Positives = 252/382 (65%), Gaps = 67/382 (17%)
Query: 57 GQVIGIDLGTTNSCVAVMEGKQAKVIENSEGSRTTPSVVAFTKDGERLVGTPARRQAVTN 116
G++IGIDLGTTNSCVA+M+G +V+EN+EG RTTPS++A+T+DGE LVG PA+RQAVTN
Sbjct: 2 GKIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTN 61
Query: 117 SANTFYATKRLIGRRFDDPEIKKDMKNLSYKIVRASNGDAWVQGSDEKVYSPSQIGAFVL 176
NT +A KRLIGRRF D E+++D+ + +KI+ A NGDAWV+ + +P QI A VL
Sbjct: 62 PQNTLFAIKRLIGRRFQDEEVQRDVSIMPFKIIAADNGDAWVE-VKGQKMAPPQISAEVL 120
Query: 177 MKMKETSEAFLNTSVKNAVITVPAYFNDSQRQATKDAGQIAGLN---------------- 220
KMK+T+E +L V AVITVPAYFND+QRQATKDAG+IAGL
Sbjct: 121 KKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYG 180
Query: 221 --------------------------------KGVFEVKSTNGDTLLGGE---------- 238
+ FEV +TNGDT LGGE
Sbjct: 181 LDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYL 240
Query: 239 --------GLDIRKDQMAMQRLKEAAEKAKIELSSSVQTDINLPYLTMDAGGPKHMNLKL 290
G+D+R D +AMQRLKEAAEKAKIELSS+ QTD+NLPY+T DA GPKHMN+K+
Sbjct: 241 VEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKV 300
Query: 291 TRSKFESLVGDLIKKTVNPCQKALQDADCKNSDIGEVLLVGGMTRMPKVQSTVQEIFGKV 350
TR+K ESLV DL+ +++ + ALQDA SDI +V+LVGG TRMP VQ V E FGK
Sbjct: 301 TRAKLESLVEDLVNRSIELLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKE 360
Query: 351 PSRAVNPDEAVAIGAAVQGGVL 372
P + VNPDEAVAIGAAVQGGVL
Sbjct: 361 PRKDVNPDEAVAIGAAVQGGVL 382
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP,
chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae}
PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Length = 394
Score = 505 bits (1302), Expect = e-176
Identities = 159/388 (40%), Positives = 217/388 (55%), Gaps = 70/388 (18%)
Query: 51 KSDGVKGQVIGIDLGTTNSCVAVMEGKQAKVIENSEGSRTTPSVVAFTKDGERLVGTPAR 110
G VIGIDLGTT SCVAVM+ + +++ N +G+R TPS VAFT D ERL+G A+
Sbjct: 12 DDVENYGTVIGIDLGTTYSCVAVMKNGKTEILANEQGNRITPSYVAFT-DDERLIGDAAK 70
Query: 111 RQAVTNSANTFYATKRLIGRRFDDPEIKKDMKNLSYKIVRASNGDAWV--QGSDEKVYSP 168
Q N NT + KRLIG +++D ++KD+K+L + +V A ++KV++P
Sbjct: 71 NQVAANPQNTIFDIKRLIGLKYNDRSVQKDIKHLPFNVVNKDGKPAVEVSVKGEKKVFTP 130
Query: 169 SQIGAFVLMKMKETSEAFLNTSVKNAVITVPAYFNDSQRQATKDAGQIAGLN-------- 220
+I +L KMK+ +E +L T V +AV+TVPAYFND+QRQATKDAG IAGLN
Sbjct: 131 EEISGMILGKMKQIAEDYLGTKVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVLRIVNEP 190
Query: 221 ------------------------------------KGVFEVKSTNGDTLLGGE------ 238
GVFEV++T+GDT LGGE
Sbjct: 191 TAAAIAYGLDKSDKEHQIIVYDLGGGTFDVSLLSIENGVFEVQATSGDTHLGGEDFDYKI 250
Query: 239 ------------GLDIRKDQMAMQRLKEAAEKAKIELSSSVQTDINLPYLTMDAGGPKHM 286
G+D+ + A+ +LK AEKAK LSS + T I + +
Sbjct: 251 VRQLIKAFKKKHGIDVSDNNKALAKLKREAEKAKRALSSQMSTRIEIDSFVDGI----DL 306
Query: 287 NLKLTRSKFESLVGDLIKKTVNPCQKALQDADCKNSDIGEVLLVGGMTRMPKVQSTVQEI 346
+ LTR+KFE L DL KKT+ P +K LQD+ + D+ +++LVGG TR+PKVQ ++
Sbjct: 307 SETLTRAKFEELNLDLFKKTLKPVEKVLQDSGLEKKDVDDIVLVGGSTRIPKVQQLLESY 366
Query: 347 F-GKVPSRAVNPDEAVAIGAAVQGGVLA 373
F GK S+ +NPDEAVA GAAVQ GVL+
Sbjct: 367 FDGKKASKGINPDEAVAYGAAVQAGVLS 394
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex,
ATP-binding, chaperone, nucleotide-BIND phosphoprotein,
stress response; HET: ADP; 1.30A {Homo sapiens} PDB:
1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A*
1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A*
3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* 1ngf_A* ...
Length = 404
Score = 499 bits (1287), Expect = e-173
Identities = 159/404 (39%), Positives = 212/404 (52%), Gaps = 73/404 (18%)
Query: 40 YSQNESLQARYKSDGVKGQVIGIDLGTTNSCVAVMEGKQAKVIENSEGSRTTPSVVAFTK 99
+ + IGIDLGTT SCV V + + ++I N +G+RTTPS VAFT
Sbjct: 6 HHSSGVDLGTENLYFQSMPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT- 64
Query: 100 DGERLVGTPARRQAVTNSANTFYATKRLIGRRFDDPEIKKDMKNLSYKIV-RASNGDAWV 158
D ERL+G A+ Q N NT + KRLIGR+F+D ++ DMK+ +++V V
Sbjct: 65 DTERLIGDAAKNQVAMNPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQV 124
Query: 159 Q-GSDEKVYSPSQIGAFVLMKMKETSEAFLNTSVKNAVITVPAYFNDSQRQATKDAGQIA 217
+ + K + P +I + VL KMKE +EA+L V +AVITVPAYFNDSQRQATKDAG I
Sbjct: 125 EYKGETKTFFPEEISSMVLTKMKEIAEAYLGGKVHSAVITVPAYFNDSQRQATKDAGTIT 184
Query: 218 GLN-----------------------------------------------KGVFEVKSTN 230
GLN G+FEVKST
Sbjct: 185 GLNVLRIINEPTAAAIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTA 244
Query: 231 GDTLLGGE------------------GLDIRKDQMAMQRLKEAAEKAKIELSSSVQTDIN 272
GDT LGGE DI ++ A++RL+ A E+AK LSSS Q I
Sbjct: 245 GDTHLGGEDFDNRMVSHLAEEFKRKHKKDIGPNKRAVRRLRTACERAKRTLSSSTQASIE 304
Query: 273 LPYLTMDAGGPKHMNLKLTRSKFESLVGDLIKKTVNPCQKALQDADCKNSDIGEVLLVGG 332
+ L +TR++FE L DL + T+ P +KAL+DA I E++LVGG
Sbjct: 305 IDSLYEGV----DFYTSITRARFEELNADLFRGTLEPVEKALRDAKLDKGQIQEIVLVGG 360
Query: 333 MTRMPKVQSTVQEIF-GKVPSRAVNPDEAVAIGAAVQGGVLAGD 375
TR+PK+Q +Q+ F GK ++++NPDEAVA GAAVQ +L GD
Sbjct: 361 STRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILIGD 404
>4e81_A Chaperone protein DNAK; chaperone; 1.90A {Escherichia coli} PDB:
3dpp_A* 3dpq_A* 3qnj_A 3dpo_A 1dkz_A 1dky_A 1dkx_A
1bpr_A 2bpr_A 1dg4_A
Length = 219
Score = 332 bits (854), Expect = e-111
Identities = 111/222 (50%), Positives = 149/222 (67%), Gaps = 12/222 (5%)
Query: 425 VLLLDVTPLSLGIETLGGVFTRLITRNTTIPTKKS---------QTQVEIKVHQGEREMA 475
VLLLDVTPLSLGIET+GGV T LI +NTTIPTK S Q+ V I V QGER+ A
Sbjct: 1 VLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRA 60
Query: 476 ADNKLLGQFTLVGIPPAPRGVPQIEVTFDIDANGIVHVSARDKGTGKEQQIVIQSSGGLS 535
ADNK LGQF L GI PAPRG+PQIEVTFDIDA+GI+HVSA+DK +GKEQ+I I++S GL+
Sbjct: 61 ADNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSGLN 120
Query: 536 KDEIENMVKNAEQYATEDKVKRDRVEALNQAESIVHDTESKMEEFKAQLPAEECAKLKEQ 595
+DEI+ MV++AE A D+ + V+ NQ + ++H T ++EE +LPA++ ++
Sbjct: 121 EDEIQKMVRDAEANAEADRKFEELVQTRNQGDHLLHSTRKQVEEAGDKLPADDKTAIESA 180
Query: 596 IAELQKLIANKDSVDPEELRKATTTLQQASLKLFEMAYKKMA 637
+ L+ + +D + L Q S KL E+A ++ A
Sbjct: 181 LTALETALKGEDK---AAIEAKMQELAQVSQKLMEIAQQQHA 219
>3n8e_A Stress-70 protein, mitochondrial; beta-sandwich, helix, substrate
binding domain, structural G consortium, SGC, chaperone;
2.80A {Homo sapiens}
Length = 182
Score = 330 bits (849), Expect = e-111
Identities = 134/175 (76%), Positives = 148/175 (84%), Gaps = 9/175 (5%)
Query: 413 SQGGVLAGDVTDVLLLDVTPLSLGIETLGGVFTRLITRNTTIPTKKS---------QTQV 463
S G L + +DVTPLSLGIETLGGVFT+LI RNTTIPTKKS QTQV
Sbjct: 8 SSGVDLGTENLYFQSMDVTPLSLGIETLGGVFTKLINRNTTIPTKKSQVFSTAADGQTQV 67
Query: 464 EIKVHQGEREMAADNKLLGQFTLVGIPPAPRGVPQIEVTFDIDANGIVHVSARDKGTGKE 523
EIKV QGEREMA DNKLLGQFTL+GIPPAPRGVPQIEVTFDIDANGIVHVSA+DKGTG+E
Sbjct: 68 EIKVCQGEREMAGDNKLLGQFTLIGIPPAPRGVPQIEVTFDIDANGIVHVSAKDKGTGRE 127
Query: 524 QQIVIQSSGGLSKDEIENMVKNAEQYATEDKVKRDRVEALNQAESIVHDTESKME 578
QQIVIQSSGGLSKD+IENMVKNAE+YA ED+ K++RVEA+N AE I+HDTE+KME
Sbjct: 128 QQIVIQSSGGLSKDDIENMVKNAEKYAEEDRRKKERVEAVNMAEGIIHDTETKME 182
>1u00_A HSC66, chaperone protein HSCA; DNAK, HSP70; 1.95A {Escherichia
coli} SCOP: a.8.4.1 b.130.1.1
Length = 227
Score = 313 bits (805), Expect = e-103
Identities = 73/229 (31%), Positives = 117/229 (51%), Gaps = 14/229 (6%)
Query: 428 LDVTPLSLGIETLGGVFTRLITRNTTIPTKKS---------QTQVEIKVHQGEREMAADN 478
+DV PLSLG+ET+GG+ ++I RNTTIP ++ QT + I V QGERE+ D
Sbjct: 1 MDVIPLSLGLETMGGLVEKVIPRNTTIPVARAQDFTTFKDGQTAMSIHVMQGERELVQDC 60
Query: 479 KLLGQFTLVGIPPAPRGVPQIEVTFDIDANGIVHVSARDKGTGKEQQIVIQSSGGLSKDE 538
+ L +F L GIP P G I VTF +DA+G++ V+A +K TG E I ++ S GL+ E
Sbjct: 61 RSLARFALRGIPALPAGGAHIRVTFQVDADGLLSVTAMEKSTGVEASIQVKPSYGLTDSE 120
Query: 539 IENMVKNAEQYATEDKVKRDRVEALNQAESIVHDTESKMEEFKAQLPAEECAKLKEQIAE 598
I +M+K++ YA +D R E +A ++ + A L A E + + A
Sbjct: 121 IASMIKDSMSYAEQDVKARMLAEQKVEAARVLESLHGALAADAALLSAAERQVIDDAAAH 180
Query: 599 LQKLIANKDSVDPEELRKATTTLQQASLKLFEMAYKKMAAEKESSSGSS 647
L ++ D + + +A + + + + + + + G S
Sbjct: 181 LSEVAQGD---DVDAIEQAIKNVDKQTQDFAARRMDQ--SVRRALKGHS 224
>3dqg_A Heat shock 70 kDa protein F; structural genomics, APC90008.12,
HSP70 protein, peptide-BIN domain, PSI-2, protein
structure initiative; 1.72A {Caenorhabditis elegans}
Length = 151
Score = 276 bits (708), Expect = 3e-90
Identities = 114/148 (77%), Positives = 128/148 (86%), Gaps = 9/148 (6%)
Query: 429 DVTPLSLGIETLGGVFTRLITRNTTIPTKKS---------QTQVEIKVHQGEREMAADNK 479
DVTPLSLGIETLGG+ T+LITRNTTIPTKKS QTQV+IKV QGEREMA NK
Sbjct: 4 DVTPLSLGIETLGGIMTKLITRNTTIPTKKSQVFSTAADGQTQVQIKVFQGEREMATSNK 63
Query: 480 LLGQFTLVGIPPAPRGVPQIEVTFDIDANGIVHVSARDKGTGKEQQIVIQSSGGLSKDEI 539
LLGQF+LVGIPPAPRGVPQ+EVTFDIDANGIV+VSARD+GTGKEQQIVIQSSGGLSKD+I
Sbjct: 64 LLGQFSLVGIPPAPRGVPQVEVTFDIDANGIVNVSARDRGTGKEQQIVIQSSGGLSKDQI 123
Query: 540 ENMVKNAEQYATEDKVKRDRVEALNQAE 567
ENM+K AE+ A ED +++ VE +NQAE
Sbjct: 124 ENMIKEAEKNAAEDAKRKELVEVINQAE 151
>2op6_A Heat shock 70 kDa protein D; HSP70/peptide-binding domain,
structural genomics, APC90014. 2, protein structure
initiative; 1.85A {Caenorhabditis elegans}
Length = 152
Score = 263 bits (675), Expect = 2e-85
Identities = 79/149 (53%), Positives = 107/149 (71%), Gaps = 10/149 (6%)
Query: 429 DVTPLSLGIETLGGVFTRLITRNTTIPTKKSQT---------QVEIKVHQGEREMAADNK 479
DV PL+LGIET+GGV T+LI RNT IPTKKSQ V I +++GER M DN
Sbjct: 4 DVNPLTLGIETVGGVMTKLIGRNTVIPTKKSQVFSTAADSQSAVSIVIYEGERPMVMDNH 63
Query: 480 LLGQFTLVGIPPAPRGVPQIEVTFDIDANGIVHVSARDKGTGKEQQIVIQSSGG-LSKDE 538
LG F + GIPPAPRGVPQIEVTF+ID NGI+HVSA DKGTG + ++ I + LS ++
Sbjct: 64 KLGNFDVTGIPPAPRGVPQIEVTFEIDVNGILHVSAEDKGTGNKNKLTITNDHNRLSPED 123
Query: 539 IENMVKNAEQYATEDKVKRDRVEALNQAE 567
IE M+ +A+++A +D+ ++++VE+ N+ E
Sbjct: 124 IERMINDADKFAADDQAQKEKVESRNELE 152
>3h0x_A 78 kDa glucose-regulated protein homolog; structural genomics,
APC89502.3, peptide binding, chaperone, BIP, PSI-2;
1.92A {Saccharomyces cerevisiae} PDB: 1ckr_A 7hsc_A
Length = 152
Score = 261 bits (669), Expect = 2e-84
Identities = 86/149 (57%), Positives = 107/149 (71%), Gaps = 10/149 (6%)
Query: 429 DVTPLSLGIETLGGVFTRLITRNTTIPTKKSQT---------QVEIKVHQGEREMAADNK 479
DV L+LGIET GGV T LI RNT IPTKKSQ V IKV++GER M+ DN
Sbjct: 4 DVNALTLGIETTGGVMTPLIKRNTAIPTKKSQIFSTAVDNQPTVMIKVYEGERAMSKDNN 63
Query: 480 LLGQFTLVGIPPAPRGVPQIEVTFDIDANGIVHVSARDKGTGKEQQIVIQSSGG-LSKDE 538
LLG+F L GIPPAPRGVPQIEVTF +DANGI+ VSA DKGTGK + I I + G L+++E
Sbjct: 64 LLGKFELTGIPPAPRGVPQIEVTFALDANGILKVSATDKGTGKSESITITNDKGRLTQEE 123
Query: 539 IENMVKNAEQYATEDKVKRDRVEALNQAE 567
I+ MV+ AE++A+ED + +VE+ N+ E
Sbjct: 124 IDRMVEEAEKFASEDASIKAKVESRNKLE 152
>3dob_A Heat shock 70 kDa protein F44E5.5; structural genomics,
APC90015.11, peptide-binding domain, HS 2, protein
structure initiative; 2.39A {Caenorhabditis elegans}
Length = 152
Score = 261 bits (669), Expect = 2e-84
Identities = 86/149 (57%), Positives = 104/149 (69%), Gaps = 10/149 (6%)
Query: 429 DVTPLSLGIETLGGVFTRLITRNTTIPTKKSQT---------QVEIKVHQGEREMAADNK 479
DV PLSLGIET GGV T LI RNT IPTK +T V I+V++GER M DN
Sbjct: 4 DVAPLSLGIETAGGVMTNLIDRNTRIPTKACKTFTTYADNQPGVSIQVYEGERAMTRDNH 63
Query: 480 LLGQFTLVGIPPAPRGVPQIEVTFDIDANGIVHVSARDKGTGKEQQIVIQSSGG-LSKDE 538
LG F L GIPPAPRGVPQIEVTF+IDANGI++VSA DK TGK +I IQ+ G L++ +
Sbjct: 64 RLGTFELSGIPPAPRGVPQIEVTFNIDANGILNVSAEDKSTGKSNRITIQNEKGRLTQSD 123
Query: 539 IENMVKNAEQYATEDKVKRDRVEALNQAE 567
I+ MV A+Q+ ED +R+RV+A NQ E
Sbjct: 124 IDRMVHEAKQFEKEDGEQRERVQARNQLE 152
>1q5l_A Chaperone protein DNAK; HSP70, chaperone, heat shock protein; NMR
{Escherichia coli} SCOP: b.130.1.1
Length = 135
Score = 236 bits (604), Expect = 3e-75
Identities = 78/130 (60%), Positives = 92/130 (70%), Gaps = 9/130 (6%)
Query: 414 QGGVLAGDVTDVLLLDVTPLSLGIETLGGVFTRLITRNTTIPTKKS---------QTQVE 464
++DVTPLSLGIET+GGV T LI +NTTIPTK S Q+ V
Sbjct: 6 HHHHHGLVPRGSHMVDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVT 65
Query: 465 IKVHQGEREMAADNKLLGQFTLVGIPPAPRGVPQIEVTFDIDANGIVHVSARDKGTGKEQ 524
I V QGER+ AADNK LGQF L GI PAPRG+PQIEVTFDIDA+GI+HVSA+DK +GKEQ
Sbjct: 66 IHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQ 125
Query: 525 QIVIQSSGGL 534
+I I++S GL
Sbjct: 126 KITIKASSGL 135
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural
protein; HET: GDP; 1.90A {Escherichia coli} SCOP:
c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A*
2zhc_A* 3iku_A 3iky_A
Length = 320
Score = 76.0 bits (186), Expect = 4e-15
Identities = 42/340 (12%), Positives = 103/340 (30%), Gaps = 53/340 (15%)
Query: 60 IGIDLGTTNSCVAVMEGKQAKVIENSEGSRTTPSVVAFTKDGERLVGTPARRQAVTNSAN 119
+ ID G+TN + E + S +F ++ G N
Sbjct: 3 VFIDDGSTNIKLQWQESDGTI--------KQHISPNSFKREWAVSFGDKKVFNYTLNGEQ 54
Query: 120 TFY---ATKRLIGRRFDDPEIKKDMKNLSYKIVRASNGDAWVQ----------GSDEKVY 166
+ + ++ ++ + + ++ + + V
Sbjct: 55 YSFDPISPDAVVTTNIAWQYSDVNVVAVHHALLTSGLPVSEVDIVCTLPLTEYYDRNNQP 114
Query: 167 SPSQIGAFVLMKMKE-TSEAFLNTSVKN---------AVITVPAYFNDSQRQATKDAG-- 214
+ I K+ T ++K+ A V ++ D G
Sbjct: 115 NTENIERKKANFRKKITLNGGDTFTIKDVKVMPESIPAGYEVLQELDELDSLLIIDLGGT 174
Query: 215 --QIAGLNKGVFEVKSTNGDTLLGGEGLDIRKDQMAMQRLKEAAEKAKIELSSSVQTDIN 272
I+ + + + GD+ LG + +K+A A+ + SS + DI
Sbjct: 175 TLDISQVMGKLSGISKIYGDSSLGVS--------LVTSAVKDALSLARTKGSSYLADDI- 225
Query: 273 LPYLTMDAGGPKHMNLKLTRSKFESLVGDLIKKTVNPCQKALQDADCKNSDIGEVLLVGG 332
+ ++ ++ S+V + + + + ++ + + + S V+++GG
Sbjct: 226 ----IIHRKDNNYLKQRINDENKISIVTEAMNEALRKLEQRVLNTLNEFSGYTHVMVIGG 281
Query: 333 MTRMPKVQSTVQEIFGKVPSRAV---NPDEAVAIGAAVQG 369
+ + V++ R N + G + G
Sbjct: 282 GAEL--ICDAVKKHTQIRDERFFKTNNSQYDLVNGMYLIG 319
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 68.2 bits (166), Expect = 7e-12
Identities = 65/376 (17%), Positives = 113/376 (30%), Gaps = 138/376 (36%)
Query: 237 GEGLDIRKDQMAMQRL-KEAAEKAKIELSSSVQTDI---NLPYLTMDAGGPKHMNLKLTR 292
G G+D+ K A Q + A K S+ DI N LT+ GG K K R
Sbjct: 1630 GMGMDLYKTSKAAQDVWNRADNHFKDTYGFSI-LDIVINNPVNLTIHFGGEK---GKRIR 1685
Query: 293 SKFESLVGDLIKKTVNPCQKALQDADCKNSDI---G-EVLLVGGMTRMPKVQSTVQ-EIF 347
+ +++ + I +K ++ + ++ + LL T Q T Q +
Sbjct: 1686 ENYSAMIFETIVDGKLKTEKIFKEINEHSTSYTFRSEKGLL--SAT-----QFT-QPALT 1737
Query: 348 GKVPSRAVNPDEAVAI-------GAAVQGGVLAGDVTDVLLLDVTPLSLGIETLGGVFTR 400
+ A G AG SLG E +
Sbjct: 1738 ------LM----EKAAFEDLKSKGLIPADATFAG------------HSLG-E-----YAA 1769
Query: 401 LITRNTTIPTKKSQGGVLAGDVTDVLLLDVTPLSLGIETLGGVFTRLITRNTTIPTKKSQ 460
L S V+ + ++ + VF R +T +P
Sbjct: 1770 LA----------SLADVM--SIESLVEV--------------VFYRGMTMQVAVP----- 1798
Query: 461 TQVEIKVHQGEREMAADNKLLGQFTLVGIPPAPRGVPQIEVTFDIDA-NGIVHVSARDKG 519
++ + M A N P ++ +F +A +V + G
Sbjct: 1799 ---RDELGRSNYGMIAIN------------PG-----RVAASFSQEALQYVVERVGKRTG 1838
Query: 520 TGKE--------QQIVIQSSG---GLSKDEIENMVKNAEQYATEDKVKRDRVEALNQAES 568
E QQ V +G L D + N++ K+++ + L ++ S
Sbjct: 1839 WLVEIVNYNVENQQYVA--AGDLRAL--DTVTNVLNFI-------KLQKIDIIELQKSLS 1887
Query: 569 IVHDTESKMEEFKAQL 584
+EE + L
Sbjct: 1888 --------LEEVEGHL 1895
Score = 40.0 bits (93), Expect = 0.003
Identities = 67/369 (18%), Positives = 112/369 (30%), Gaps = 140/369 (37%)
Query: 295 FESLVGDLIK---KTVNPCQKALQDAD---CKNSDIGEVL-------------------- 328
+ LVGDLIK +T++ + DA+ + +I E L
Sbjct: 180 YHVLVGDLIKFSAETLSELIRTTLDAEKVFTQGLNILEWLENPSNTPDKDYLLSIPISCP 239
Query: 329 LVG--------------GMTR---MPKVQSTVQEIFGKVPSRAV-----------NPDEA 360
L+G G T ++ G V + A+ + +A
Sbjct: 240 LIGVIQLAHYVVTAKLLGFTPGELRSYLKGATGHSQGLVTAVAIAETDSWESFFVSVRKA 299
Query: 361 VA----IGAAVQGGVLAGDVTDVLLLDV--------TP-LSL-GIETLGGVFTRLITRNT 406
+ IG + +L D +P LS+ + T V + N+
Sbjct: 300 ITVLFFIGVRCYEAYPNTSLPPSILEDSLENNEGVPSPMLSISNL-TQEQVQDYVNKTNS 358
Query: 407 TIPTKKS---------QGGVLAGDVTDVLLLDVTPLSLGIETLGGVFTRLITRNTTIPTK 457
+P K + V++G P S L G+ L R P+
Sbjct: 359 HLPAGKQVEISLVNGAKNLVVSG----------PPQS-----LYGLNLTL--RKAKAPSG 401
Query: 458 KSQTQVEIKVHQGEREMAADNKLLGQFTL-VGIP-------PAPRGVPQ--IEVTFDIDA 507
Q+ ++ ER++ N +F L V P PA + + ++ +A
Sbjct: 402 LDQS----RIPFSERKLKFSN----RF-LPVASPFHSHLLVPASDLINKDLVKNNVSFNA 452
Query: 508 N--GI-VHVSARDKGTGKEQQIVIQSSGGLSKDEIENMVKNAEQYATEDKVKRDRV--EA 562
I V+ D G + + LS E +V D + R V E
Sbjct: 453 KDIQIPVY----DTFDGSDLR-------VLSGSISERIV---------DCIIRLPVKWET 492
Query: 563 LNQAESIVH 571
Q H
Sbjct: 493 TTQF-KATH 500
Score = 36.6 bits (84), Expect = 0.034
Identities = 17/64 (26%), Positives = 24/64 (37%), Gaps = 11/64 (17%)
Query: 578 EEFKAQLPA--EECAKLKEQI--AEL----QKLIANKDSVDPEELRKATTTLQQASLKLF 629
E+F LP E A E AEL ++ V+P ++ + L L F
Sbjct: 35 EQFNKILPEPTEGFAADDEPTTPAELVGKFLGYVS--SLVEPSKVGQFDQVL-NLCLTEF 91
Query: 630 EMAY 633
E Y
Sbjct: 92 ENCY 95
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization
EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A
{Carboxydothermus hydrogenoformans z-29organism_taxid}
Length = 272
Score = 61.5 bits (150), Expect = 1e-10
Identities = 45/348 (12%), Positives = 78/348 (22%), Gaps = 119/348 (34%)
Query: 60 IGIDLGTTNSCVAVMEGKQAKVIENSEGSRTTPSVVAFTKDGER--LVGTPARRQAVTNS 117
+ L N + ++ P V LV T V
Sbjct: 6 LEQKLNLLNDLIV----REIVNPLP------PPYKVGVDLGTADIVLVVTDQEGIPV--- 52
Query: 118 ANTFYATKRLIGRRFDDPEIKKDMKNLSYKIVRASNGDAWVQGSDEKVYSPSQIGAFVLM 177
A + KD + ++
Sbjct: 53 AGALKWASVV-----------KD-----------------------GLVVDYIGAIQIVR 78
Query: 178 KMKETSEAFLNTSVKNAVITVPAYFNDSQRQATKDAGQIAGLNK---------------- 221
++K E L + + A +P +A AGL
Sbjct: 79 ELKAKVERLLGSELFQAATAIPPGTVGRNAEACGHVVAGAGLELVTLVDEPVAAARALGI 138
Query: 222 ----------GVFEVK-------STNGDTLLGGEGLDIRKDQMAMQRLK---EAAEKAKI 261
G + + D GG L + K E AE K
Sbjct: 139 NDGIVVDIGGGTTGIAVIEKGKITATFDEPTGGTHLS----LVLAGSYKIPFEEAETIKK 194
Query: 262 ELSSSVQTDINLPYLTMDAGGPKHMNLKLTRSKFESLVGDLIKKTVNPCQKALQDADCKN 321
+ S + +V +I+K ++ +++ D
Sbjct: 195 DFSRH--------------------------REIMRVVRPVIEKMALIVKEVIKNYD--- 225
Query: 322 SDIGEVLLVGGMTRMPKVQSTVQEIFGKVPSRAVNPDEAVAIGAAVQG 369
V +VGG + GK ++P +G A+ G
Sbjct: 226 -QTLPVYVVGGTAYLTGFSEEFSRFLGKEVQVPIHPLLVTPLGIALFG 272
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 53.3 bits (127), Expect = 2e-07
Identities = 72/467 (15%), Positives = 141/467 (30%), Gaps = 134/467 (28%)
Query: 181 ETSEAFLNTSVKNAV-ITVPAYFNDSQRQATKDAGQIAGLNKGVFE--VKSTNGDT---L 234
ET E K+ + + A+ ++ + +D + L+K + + S + +
Sbjct: 10 ETGE--HQYQYKDILSVFEDAFVDNFDCKDVQDMPKSI-LSKEEIDHIIMSKDAVSGTLR 66
Query: 235 LGGEGLDI--RKDQMAMQRLKEAAEKAKIE-LSSSVQTDINLPYLTMDAGGPKHMNLKLT 291
L K + +Q+ E + + L S ++T+ P +
Sbjct: 67 L----FWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTR-------MYIEQ 115
Query: 292 RSKFESLVGDLIKKTVN--PCQKALQDADCKNSDIGEVLLVGGMTRMPKVQSTVQEIFGK 349
R + + K V+ L+ A + VL+ G + GK
Sbjct: 116 RDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDG----VLG--------SGK 163
Query: 350 VPSRAVNPDEAVAIGAAVQGGVLAGDV-TDVLLLDVTPLSLGIETLGGVFTRLIT-RNTT 407
+ +A DV + +F + +N
Sbjct: 164 --T------------------WVALDVCLSYKVQCKMD--------FKIF--WLNLKNCN 193
Query: 408 IPTKKSQGGVLAGDVTDVLLLDVTPLSLGIETLGGVFTRLITRNTTIPTKKSQTQVEIKV 467
P + +L + L I+ +T ++ I + Q E++
Sbjct: 194 SP--------------ETVLEMLQKLLYQID---PNWTSRSDHSSNIKLRIHSIQAELRR 236
Query: 468 HQGEREMAADNKLLGQFTLVGIPPAPRGV--PQIEVTFDIDANGIVHVSARDK------G 519
+ N LL L V + F++ I+ ++ R K
Sbjct: 237 LLKSKPYE--NCLL---VL-------LNVQNAKAWNAFNLSCK-IL-LTTRFKQVTDFLS 282
Query: 520 TGKEQQIVI-QSSGGLSKDEIENMVKNAEQYATEDKVKRDRVEALNQ--------AESIV 570
I + S L+ DE+++++ + + + E L AESI
Sbjct: 283 AATTTHISLDHHSMTLTPDEVKSLLLKY----LDCRPQDLPREVLTTNPRRLSIIAESI- 337
Query: 571 HDTESKMEEFKAQLPAEECAKLKEQI-AELQKLIANKDSVDPEELRK 616
D + + +K + C KL I + L L +P E RK
Sbjct: 338 RDGLATWDNWK-HV---NCDKLTTIIESSLNVL-------EPAEYRK 373
Score = 49.1 bits (116), Expect = 5e-06
Identities = 58/379 (15%), Positives = 106/379 (27%), Gaps = 91/379 (24%)
Query: 10 KRVVDSTYLSPNISSSQN--FSVLLRKSPGSLYSQ--NESLQARYK--SDGVKGQVIGID 63
K +D +S + S F LL K + + E L+ YK +K +
Sbjct: 48 KEEIDHIIMSKDAVSGTLRLFWTLLSK-QEEMVQKFVEEVLRINYKFLMSPIKTEQRQPS 106
Query: 64 LGTT--NSCVAVMEG-------------KQAKVIENS-EGSRTTPSVVAFTKDG---ERL 104
+ T + + + + R +V+ G +
Sbjct: 107 MMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWV 166
Query: 105 VGTPARRQAVT--NSANTFYATKRLIGRRFDDPEIKKDMKNLSYKIVRASNGDAWVQGSD 162
V F+ + + + ++ L Y+I W SD
Sbjct: 167 ALDVCLSYKVQCKMDFKIFWLN---LKNCNSPETVLEMLQKLLYQIDP-----NWTSRSD 218
Query: 163 EKVYSPSQIGAF-----VLMKMKETSEAFL---NTSVKNAVITVPAYFNDSQRQ--ATKD 212
+I + L+K K L N V+NA FN S + T+
Sbjct: 219 HSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLN--VQNA--KAWNAFNLSCKILLTTRF 274
Query: 213 AGQIAGLNKGVFEVKSTNGDTLLGGEGLDIRKDQMAMQRLKEAAEK--AKIELSSSVQTD 270
K V D L I D +M + + K L Q
Sbjct: 275 --------KQVT-------DFLSAATTTHISLDHHSMTLTPDEVKSLLLKY-LDCRPQD- 317
Query: 271 INLPYLTMDAGGPKHMNL-------KLTRSK-FESLVGDLIKKTVNPCQKALQDADCK-- 320
LP + P+ +++ L ++ + D + + L+ A+ +
Sbjct: 318 --LP-REVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKM 374
Query: 321 ---------NSDIGEVLLV 330
++ I +LL
Sbjct: 375 FDRLSVFPPSAHIPTILLS 393
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB,
PARM, structural PROT; 1.90A {Thermoplasma acidophilum}
SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Length = 346
Score = 50.5 bits (120), Expect = 9e-07
Identities = 43/352 (12%), Positives = 101/352 (28%), Gaps = 83/352 (23%)
Query: 59 VIGIDLGTTNSCVAVMEGKQAKVIENSEGSRTTPSVVAFTKDGERLVGTPARRQAVTNSA 118
V+G+D+G ++ KVI PS A T+ +G +
Sbjct: 23 VVGLDVGYGDT----------KVIGVDGKRIIFPSRWAVTETESWGIGGKIPVLSTDGGQ 72
Query: 119 NTFYATKRLIGRRFDDPEIKKDMKNLSYKIVRASNGDAWVQGSDEKVYSPSQIGAFVLMK 178
F G+ I+ + + + +
Sbjct: 73 TKFI-----YGKYASGNNIRVPQ--------------------GDGRLASKEAFPLIAAA 107
Query: 179 MKETSEAFLNTSVKNAVIT-VPAYFNDSQRQATKDAGQIAGLNKGVFE------------ 225
+ E+ + V + + P D + +A K+A + L E
Sbjct: 108 LWESGIHNDGSPVDLVIGSGTPLGTFDLEVKAAKEALENKVLTVTGPEGEVRQFNITRLI 167
Query: 226 -----------------VKSTNGDTL---LGGEGLDI----RKDQMAMQRLKEAAEKAKI 261
++ G + +G D+ D + L + +
Sbjct: 168 MRPQGVGAALYLLNQGIIEQQPGYGVVIDVGSRTTDVLTINLMDMEPVVELSFSLQIGVG 227
Query: 262 ELSSSV------QTDINLPYLTMDAGGPKHMNLKLTRSKFESLVGDLIKKTVNPCQKALQ 315
+ S++ +T +P+ + + + + G +++ N + ++
Sbjct: 228 DAISALSRKIAKETGFVVPFDLAQEALSHPVMFRQKQVGGPEVSGPILEDLANRIIENIR 287
Query: 316 DA-DCKNSDIGEVLLVGGMTRMPKVQSTVQEIFGK--VPSRAVNPDEAVAIG 364
+ + ++ VGG + + + +EI V + + A A+G
Sbjct: 288 LNLRGEVDRVTSLIPVGGGSNL--IGDRFEEIAPGTLVKIKPEDLQFANALG 337
>2p32_A Heat shock 70 kDa protein A; three-helix bundle, chaperone; 3.20A
{Caenorhabditis elegans}
Length = 120
Score = 46.9 bits (111), Expect = 1e-06
Identities = 13/110 (11%), Positives = 41/110 (37%), Gaps = 2/110 (1%)
Query: 546 AEQYATEDKVKRDRVEALNQAESIVHDTESKMEE--FKAQLPAEECAKLKEQIAELQKLI 603
+ + + ES + + +E+ K ++ E+ K++++ E+ K +
Sbjct: 3 SSHHHHHHSSGLVPRGSHMGLESYAFNLKQTIEDEKLKDKISPEDKKKIEDKCDEILKWL 62
Query: 604 ANKDSVDPEELRKATTTLQQASLKLFEMAYKKMAAEKESSSGSSSSGSSD 653
+ + + EE L+ + + Y+ ++ ++G +
Sbjct: 63 DSNQTAEKEEFEHQQKDLEGLANPIISKLYQSAGGAPPGAAPGGAAGGAG 112
>3lof_A Heat shock 70 kDa protein 1; structural genomics, HSPA1B, HSP70,
PSI-2, prote structure initiative; 2.40A {Homo sapiens}
PDB: 2lmg_A
Length = 113
Score = 41.8 bits (98), Expect = 7e-05
Identities = 16/102 (15%), Positives = 36/102 (35%), Gaps = 3/102 (2%)
Query: 553 DKVKRDRVEALNQAESIVHDTESKMEE--FKAQLPAEECAKLKEQIAELQKLIANKDSVD 610
+ +RV A N ES + +S +E+ K ++ + K+ ++ E+ + +
Sbjct: 2 NAA-AERVSAKNALESYAFNMKSAVEDEGLKGKISEADKKKVLDKCQEVISWLDANTLAE 60
Query: 611 PEELRKATTTLQQASLKLFEMAYKKMAAEKESSSGSSSSGSS 652
+E L+Q + Y+ G+
Sbjct: 61 KDEFEHKRKELEQVCNPIISGLYQGAGGPGPGGFGAQGPKGG 102
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,,
transferase, structural genomics, PSI-2; 2.00A
{Bifidobacterium adolescentis ATCC15703}
Length = 515
Score = 42.7 bits (101), Expect = 3e-04
Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 4/69 (5%)
Query: 310 CQKALQDADCKNSDIGEVLLVGGMTRMPKVQSTVQEIFGKVPSRAVNPDEAVAIGAAVQG 369
C + ++ + I +LL+GG + +++ I G + DE VAIGAA Q
Sbjct: 414 CLELIRSL---GASITRILLIGGGAKSEAIRTLAPSILG-MDVTRPATDEYVAIGAARQA 469
Query: 370 GVLAGDVTD 378
+ T+
Sbjct: 470 AWVLSGETE 478
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp
contractIle protein-transport protein complex; 24.00A
{Gallus gallus}
Length = 1080
Score = 39.7 bits (93), Expect = 0.003
Identities = 22/159 (13%), Positives = 59/159 (37%), Gaps = 14/159 (8%)
Query: 522 KEQQIVIQSS--GGLSKDEIENMVKNA--EQYATEDKVKRDRVEALNQAESIV------- 570
+ + I+IQ G L++ +K Q + + ++ L V
Sbjct: 864 EHKSIIIQKHVRGWLARVHYHRTLKAIVYLQCCYRRMMAKRELKKLKIEARSVERYKKLH 923
Query: 571 HDTESKMEEFKAQLPAEECAKLKEQIAELQKLIANKDSVDPEELRKATTTLQQASLKLFE 630
E+K+ + + ++ E+ + K + ++ L + E+LR L+ + +
Sbjct: 924 IGLENKIMQLQRKI-DEQNKEYKSLLEKMNNLEITYSTET-EKLRSDVERLRMSEEEAKN 981
Query: 631 MAYKKMAAEKESSSGSSS-SGSSDQTQSQEEDKKKEDKQ 668
+ ++ ++E + + + ++ EE K +
Sbjct: 982 ATNRVLSLQEEIAKLRKELHQTQTEKKTIEEWADKYKHE 1020
>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM,
protein engineering, structural protein; HET: ADP; 2.80A
{Dictyostelium discoideum} SCOP: k.1.1.1
Length = 1010
Score = 37.3 bits (87), Expect = 0.016
Identities = 13/133 (9%), Positives = 37/133 (27%), Gaps = 17/133 (12%)
Query: 536 KDEIENMVKNAEQYATEDKVKRDRVEALNQAESIVHDTESKMEEFKAQLPAEECAKLKEQ 595
++EN Y ++ D + A+ + + + + + Q ++ + L +
Sbjct: 895 LKKLENWATTKSVYLGSNE-TGDSITAVQAKLKNLEAFDGECQSLEGQSNSDLLSILAQL 953
Query: 596 IAELQKLIANKDSVDPEELRKATTTLQQASLKLFEMAYKKMAAEKESSSGSSSSGSSDQT 655
+ + T ++ ++ + AE E +
Sbjct: 954 TELNYNGVPELTERKDTFFAQQWTGVKSSAETYKN----TLLAELE------------RL 997
Query: 656 QSQEEDKKKEDKQ 668
Q E+
Sbjct: 998 QKIEDLHHHHHHH 1010
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ,
structural protein; 2.10A {Thermotoga maritima} SCOP:
c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Length = 344
Score = 35.9 bits (84), Expect = 0.036
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 11/54 (20%)
Query: 60 IGIDLGTTNSCVAVMEGKQAKVIENSEGSRTTPSVVAFTKDGERL--VGTPARR 111
IGIDLGT N+ V + GK ++ N PSV+A + VG A+
Sbjct: 6 IGIDLGTANTLVFL-RGK--GIVVNE------PSVIAIDSTTGEILKVGLEAKN 50
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion;
HET: ATP; 2.20A {Thermus thermophilus}
Length = 377
Score = 35.6 bits (82), Expect = 0.041
Identities = 20/116 (17%), Positives = 44/116 (37%), Gaps = 7/116 (6%)
Query: 254 EAAEKAKIELSSSVQTDINLPYLTMDAGGPKHMNLKLTRSKFESLVGDLIKKTVNPCQKA 313
AAE+ K + + L + + ++ +L ++ +++
Sbjct: 239 LAAEEVKRTYGMATLPTEDEELLLDFDAERERYSPGRIYDAIRPVLVELTQE----LRRS 294
Query: 314 LQ--DADCKNSDIGEVLLVGGMTRMPKVQSTVQEIFGKVPSRAVNPDEAVAIGAAV 367
L+ + + L+GG +++ + S + + G V VNP EAVA+
Sbjct: 295 LEFFRIQLEEASPEVGYLLGGGSKLRGLASLLTDTLG-VNLEPVNPWEAVAVDPKR 349
Score = 30.2 bits (68), Expect = 2.2
Identities = 7/38 (18%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Query: 56 KGQVIGIDLGTTNSCVAVMEGKQAKVIENSEGSRTTPS 93
+ + +G+++G + + + G + + SR TP
Sbjct: 12 RVEALGLEIGASALKLVEVSGNPPAL--KALASRPTPP 47
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment
2, heavy meromyosin, essential light chain, motor
protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1
PDB: 3j04_A 3dtp_B 3dtp_A
Length = 1184
Score = 36.0 bits (83), Expect = 0.047
Identities = 24/127 (18%), Positives = 60/127 (47%), Gaps = 9/127 (7%)
Query: 546 AEQYATEDKVKRDRVEALNQAESIVHDTESKMEEFKAQLPA--EECAKLKEQIAELQKLI 603
E YA ++++ + E I+H+ E+++EE + + E K+++Q+ +L++ +
Sbjct: 905 TELYAEAEEMRVRLAAKKQELEEILHEMEARIEEEEERSQQLQAEKKKMQQQMLDLEEQL 964
Query: 604 A-NKDSVDPEELRKATTTLQ----QASLKLFEMAYKKMAAEKESSSGSSSSGSSDQTQSQ 658
+ + +L K T + + + + E K+ E++ S +++ ++
Sbjct: 965 EEEEAARQKLQLEKVTADGKIKKMEDDILIMEDQNNKLTKERKLLEERVSDLTTN--LAE 1022
Query: 659 EEDKKKE 665
EE+K K
Sbjct: 1023 EEEKAKN 1029
Score = 34.8 bits (80), Expect = 0.10
Identities = 17/131 (12%), Positives = 48/131 (36%), Gaps = 21/131 (16%)
Query: 536 KDEIENMVKNAEQYATEDKVKRDRVEALNQAESIVHDTESKMEEFKAQLPAEECAKLKEQ 595
K ++++ +Q K ++ E ++ + + + E K + + K +
Sbjct: 986 KKMEDDILIMEDQNNKLTKERKLLEERVSDLTTNLAEEEEKAKNLT-----KLKNKHESM 1040
Query: 596 IAELQKLIANKDSVDPEELRKATTTLQQASLKLFEMAYKKMAAEKESSSGSSSSGSSDQT 655
I+EL+ + ++ K+ L++ +K+ E + +
Sbjct: 1041 ISELEVRL--------KKEEKSRQELEKIK--------RKLEGESSDLHEQIAELQAQIA 1084
Query: 656 QSQEEDKKKED 666
+ + + KKE+
Sbjct: 1085 ELKAQLAKKEE 1095
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant
photosynthetic reaction center, peripheral antenna; HET:
CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1
Length = 154
Score = 34.2 bits (77), Expect = 0.051
Identities = 8/33 (24%), Positives = 19/33 (57%), Gaps = 7/33 (21%)
Query: 336 MPKVQSTVQEIFGKVPSRAVNPDEAVAIGAAVQ 368
+ K+Q++++ ++ A P A+AI A ++
Sbjct: 22 LKKLQASLK-LYA--DDSA--P--ALAIKATME 47
Score = 31.8 bits (71), Expect = 0.38
Identities = 12/29 (41%), Positives = 15/29 (51%), Gaps = 5/29 (17%)
Query: 593 KEQIAELQ---KLIANKDSVDPEELRKAT 618
K+ + +LQ KL A DS P KAT
Sbjct: 19 KQALKKLQASLKLYA-DDSA-PALAIKAT 45
Score = 30.7 bits (68), Expect = 0.88
Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 14/38 (36%)
Query: 610 DPEELRKATTTLQQASLKLFE------MAYKKMAAEKE 641
+ + L+K LQ ASLKL+ +A K A E
Sbjct: 18 EKQALKK----LQ-ASLKLYADDSAPALAIK---ATME 47
Score = 30.3 bits (67), Expect = 1.0
Identities = 9/47 (19%), Positives = 16/47 (34%), Gaps = 18/47 (38%)
Query: 138 KKDMKNLSYKIVRASNGDAWVQGSDEKVYSPSQIGAFVLMKMKETSE 184
K+ +K L + K+Y+ A + +K T E
Sbjct: 19 KQALKKLQASL---------------KLYADDSAPA---LAIKATME 47
>1ud0_A HSC70, 70 kDa heat-shock-like protein; chaperone; 3.45A {Rattus
norvegicus} SCOP: a.8.4.1
Length = 113
Score = 32.6 bits (74), Expect = 0.099
Identities = 12/101 (11%), Positives = 35/101 (34%), Gaps = 2/101 (1%)
Query: 559 RVEALNQAESIVHDTESKMEE--FKAQLPAEECAKLKEQIAELQKLIANKDSVDPEELRK 616
+ ES + ++ +E+ + ++ E+ K+ ++ E+ + + + EE
Sbjct: 2 VPRGSHMLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIISWLDKNQTAEKEEFEH 61
Query: 617 ATTTLQQASLKLFEMAYKKMAAEKESSSGSSSSGSSDQTQS 657
L++ + Y+ G G + +
Sbjct: 62 QQKELEKVCNPIITKLYQSAGGMPGGMPGGFPGGGAPPSGG 102
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase;
HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Length = 484
Score = 34.5 bits (80), Expect = 0.11
Identities = 13/70 (18%), Positives = 22/70 (31%), Gaps = 3/70 (4%)
Query: 310 CQKALQDADCKNSDIGEVLLVGGMTRMPKVQSTVQEIFGKVPSRAVNPDEAVAIGAAVQG 369
+ V L+GG R + + +I G+ D A+GAA
Sbjct: 376 GMDVVHAC---GIKPQSVTLIGGGARSEYWRQMLADISGQQLDYRTGGDVGPALGAARLA 432
Query: 370 GVLAGDVTDV 379
+ A +
Sbjct: 433 QIAANPEKSL 442
>3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic
vesicle, membrane, Ca structural protein; 7.94A {Bos
taurus}
Length = 190
Score = 33.2 bits (75), Expect = 0.14
Identities = 12/66 (18%), Positives = 24/66 (36%), Gaps = 5/66 (7%)
Query: 522 KEQQIVIQSSGGLSKDEIENMVKNAEQYATEDKVKRDRVEALNQAESIVHDTESKMEEFK 581
+EQ+ +Q SK + + A++ E ++ Q E + + F
Sbjct: 92 EEQRKRLQELDAASKVMEQEWREKAKKDLEEWNQRQS-----EQVEKNKINNRIADKAFY 146
Query: 582 AQLPAE 587
Q A+
Sbjct: 147 QQPDAD 152
Score = 32.8 bits (74), Expect = 0.18
Identities = 12/73 (16%), Positives = 27/73 (36%), Gaps = 9/73 (12%)
Query: 536 KDEIENMVKNAEQYATE----DKV-KRDRVEALNQAESIVHD----TESKMEEFKAQLPA 586
E E++ K E+ D K E +A+ + + ++E+ K
Sbjct: 81 TQEPESIRKWREEQRKRLQELDAASKVMEQEWREKAKKDLEEWNQRQSEQVEKNKINNRI 140
Query: 587 EECAKLKEQIAEL 599
+ A ++ A++
Sbjct: 141 ADKAFYQQPDADI 153
Score = 32.8 bits (74), Expect = 0.22
Identities = 11/78 (14%), Positives = 30/78 (38%), Gaps = 8/78 (10%)
Query: 586 AEECAKLKEQIAELQKLIANKDSVDPEELRKATTTLQQASLKLFEMAYKKMAAEKESSSG 645
+E +++ E +K + D+ ++A L E ++ + + E +
Sbjct: 81 TQEPESIRKWREEQRKRLQELDA---ASKVMEQEWREKAKKDLEEW-NQRQSEQVEKN-- 134
Query: 646 SSSSGSSDQT--QSQEED 661
++ +D+ Q + D
Sbjct: 135 KINNRIADKAFYQQPDAD 152
Score = 29.4 bits (65), Expect = 2.9
Identities = 10/60 (16%), Positives = 22/60 (36%), Gaps = 12/60 (20%)
Query: 242 IRK---DQMAMQRLKEAAEKAKI-ELSSSVQTDINLPYLTMDAGGPKHMNLKLTRSKFES 297
IRK +Q + +AA K E + D+ + + ++ ++K +
Sbjct: 87 IRKWREEQRKRLQELDAASKVMEQEWREKAKKDLEEWN--------QRQSEQVEKNKINN 138
>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A
{Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A*
Length = 995
Score = 34.2 bits (79), Expect = 0.14
Identities = 16/120 (13%), Positives = 40/120 (33%), Gaps = 6/120 (5%)
Query: 522 KEQQIVIQSSGGLSKDEIENMVKNAEQYATEDKVKRDRVEALNQAESIVHDTESKMEEFK 581
K+ +++Q + I ++N + + +++ ++ + + E+ E +
Sbjct: 874 KKIAVLLQK-----YNRILKKLENWATTKSVYLGSNETGDSITAVQAKLKNLEAFDGECQ 928
Query: 582 AQLPAEECAKLKEQIAELQKLIANKDSVDPEELRKATTTLQQASLKLFEMAYKKMAAEKE 641
+ + L +A+L +L N E E + AE E
Sbjct: 929 SLEGQSN-SDLLSILAQLTELNYNGVPELTERKDTFFAQQWTGVKSSAETYKNTLLAELE 987
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Length = 329
Score = 33.5 bits (76), Expect = 0.23
Identities = 19/153 (12%), Positives = 44/153 (28%), Gaps = 30/153 (19%)
Query: 212 DAGQIAGLNKGVFEVKSTNGDTLLGGEGLDIRKDQMAMQRLKEAAEKAKIELSSSVQTDI 271
+ + GV ++ GD L ++ ++ A L K E+ + T I
Sbjct: 195 NPSERFIEEHGVKDLIIRVGDALTDLNNGNLITNEQAESALNNGYMKKGGEIDTESSTVI 254
Query: 272 NLPYLTMDAGGPKHMNLKLTRSKFESLVGDLIKKTVNPCQKALQDADCKNSDIGEVLLVG 331
+ +K + K ++ K + ++ +G
Sbjct: 255 K----------------------------KVKEKFLKDAIKLIEKRGFKLDQLDSLIFIG 286
Query: 332 GMTRMPKVQSTVQEIFGKVPSRAVNPDEAVAIG 364
G T+ ++ + + + N G
Sbjct: 287 GTTQK--LKEQISKTYPNNSIITNNSQWTTCEG 317
>2zvf_A Alanyl-tRNA synthetase; C-terminal, oligomerization domain,
aminoacyl-tRNA synthetase, ATP-binding, cytoplasm,
ligase, nucleotide-binding; 3.20A {Archaeoglobus
fulgidus}
Length = 171
Score = 31.5 bits (72), Expect = 0.45
Identities = 15/70 (21%), Positives = 25/70 (35%), Gaps = 5/70 (7%)
Query: 558 DRVEALNQAESIVHDTESKMEEFKAQLPAEECAKLKEQIAELQ--KLIANKDSVDPEELR 615
VE E D ++E K+ + L E+ E K++A D + L+
Sbjct: 32 KTVERF-FEE--WKDQRKEIERLKSVIADLWADILMERAEEFDSMKVVAEVVDADMQALQ 88
Query: 616 KATTTLQQAS 625
K L +
Sbjct: 89 KLAERLAEKG 98
>1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1
PDB: 2tma_A 2w49_A 2w4u_A
Length = 284
Score = 31.5 bits (71), Expect = 0.68
Identities = 30/143 (20%), Positives = 57/143 (39%), Gaps = 11/143 (7%)
Query: 536 KDEIENMVKNAEQYATEDKVKRDRVEALN----QAESIVHDTESKMEEFKAQLPAEECAK 591
K + EN + A++ + K DR + L + + TE +++++ L + K
Sbjct: 12 KLDKENALDRADEAEADKKAAEDRSKQLEDELVSLQKKLKATEDELDKYSEAL-KDAQEK 70
Query: 592 LKEQIAELQKLIANKDSVDP------EELRKATTTLQQASLKLFEMAYKKMAAEKESSSG 645
L+ + A+ S++ EEL +A L A KL E +E+
Sbjct: 71 LELAEKKATDAEADVASLNRRIQLFEEELDRAQERLATALQKLEEAEKAADESERGMKVI 130
Query: 646 SSSSGSSDQTQSQEEDKKKEDKQ 668
S + ++ +E + KE K
Sbjct: 131 ESRAQKDEEKMEIQEIQLKEAKH 153
>1whu_A Polynucleotide phosphorylase; 3'-5' RNA exonuclease; pnpase,
alpha-helical domain, structural genomics; NMR {Mus
musculus} SCOP: a.4.9.1
Length = 104
Score = 29.7 bits (67), Expect = 0.78
Identities = 14/66 (21%), Positives = 22/66 (33%), Gaps = 8/66 (12%)
Query: 536 KDEIENMVKNAEQYATEDKVKRDRVEALNQAESIVHDTESKMEEFKAQLPAEECAKLKEQ 595
K + DKV RD EA+N+ E K + P + ++ E
Sbjct: 23 KIIAMEKLYAVFTDYEHDKVSRD--EAVNKI------RLDTEEHLKEKFPEVDQFEIIES 74
Query: 596 IAELQK 601
+ K
Sbjct: 75 FNIVAK 80
>2d7d_A Uvrabc system protein B; helicase, protein-DNA-ADP ternary complex,
hydrolase/DNA complex; HET: ADP; 2.10A {Bacillus
subtilis} PDB: 2nmv_A* 2fdc_A* 1t5l_A 3uwx_B 1d9z_A*
1d9x_A 2d7d_B* 2nmv_B*
Length = 661
Score = 31.7 bits (73), Expect = 0.82
Identities = 14/67 (20%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Query: 537 DEIENMVKNAEQYATEDKVKRDRVEALNQAE--SIVHDTESKMEEFKAQLPAEECAKLKE 594
++ AE A ++ + + E +V E +M+E L E A+L++
Sbjct: 593 RDVIRATVAAEDKAEYKTKAAPKLSKMTKKERQKVVEQMEHEMKEAAKALDFERAAELRD 652
Query: 595 QIAELQK 601
+ EL+
Sbjct: 653 LLLELKA 659
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics,
protein structure initiative; HET: MSE XUL EPE; 1.61A
{Yersinia pseudotuberculosis} PDB: 3gg4_A*
Length = 554
Score = 31.5 bits (72), Expect = 0.93
Identities = 14/57 (24%), Positives = 23/57 (40%), Gaps = 1/57 (1%)
Query: 323 DIGEVLLVGGMTRMPKVQSTVQEIFGKVPSRAVNPDEAVAIGAAVQGGVLAGDVTDV 379
+I ++ GG T+ P G EA+ +G+A+ G V AG +
Sbjct: 442 NIDTMMASGGGTKNPIFVQEHANATGC-AMLLPEESEAMLLGSAMMGTVAAGVFESL 497
>1e52_A Excinuclease ABC subunit; DNA excision repair, UVRB, DNA repair,
UVRC binding domain; NMR {Escherichia coli} SCOP:
a.2.9.1 PDB: 1qoj_A
Length = 63
Score = 28.6 bits (64), Expect = 1.0
Identities = 10/39 (25%), Positives = 22/39 (56%)
Query: 565 QAESIVHDTESKMEEFKAQLPAEECAKLKEQIAELQKLI 603
+ +H+ E M + L EE A++++Q+ +L++L
Sbjct: 21 ALQQKIHELEGLMMQHAQNLEFEEAAQIRDQLHQLRELF 59
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO
11200H, transferase, PSI-2; 2.30A {Rhodospirillum
rubrum}
Length = 508
Score = 31.4 bits (72), Expect = 1.0
Identities = 13/73 (17%), Positives = 19/73 (26%), Gaps = 10/73 (13%)
Query: 310 CQKALQDADCKNSDIGEVLLVGGMTRMP---KVQSTVQEIFGKVPSRAVNPDEAVAIGAA 366
L D G TR + + V P + + A+GAA
Sbjct: 390 HVAVLDDI---GHAPQRFFASDGGTRSRVWMGIMADV---LQ-RPVQLLANPLGSAVGAA 442
Query: 367 VQGGVLAGDVTDV 379
+ GD
Sbjct: 443 WVAAIGGGDDLGW 455
>1c4o_A DNA nucleotide excision repair enzyme UVRB; uvrabc, helicase,
hypertherm protein, replication; HET: DNA BOG; 1.50A
{Thermus thermophilus} SCOP: c.37.1.19 c.37.1.19 PDB:
1d2m_A*
Length = 664
Score = 31.4 bits (72), Expect = 1.1
Identities = 10/80 (12%), Positives = 29/80 (36%)
Query: 539 IENMVKNAEQYATEDKVKRDRVEALNQAESIVHDTESKMEEFKAQLPAEECAKLKEQIAE 598
+ V+ + ++ + + + + E M + L E A+L+++I
Sbjct: 582 VRKEVRAVIRPEGYEEAPLEADLSGEDLRERIAELELAMWQAAEALDFERAARLRDEIRA 641
Query: 599 LQKLIANKDSVDPEELRKAT 618
L+ + + +P +
Sbjct: 642 LEARLQGVRAPEPVPGGRKR 661
>1quu_A Human skeletal muscle alpha-actinin 2; triple-helix coiled coil,
contractIle protein; 2.50A {Homo sapiens} SCOP: a.7.1.1
a.7.1.1
Length = 250
Score = 30.4 bits (68), Expect = 1.7
Identities = 25/150 (16%), Positives = 47/150 (31%), Gaps = 10/150 (6%)
Query: 520 TGKEQQIVIQSSGGLSKDEIENMVKNAEQYATEDKVKRDRVEALNQ-AESIVHDTESKME 578
GKEQ ++ + S E+ +++ E + ++ +DRVE + A+ +
Sbjct: 31 YGKEQILLQKDYESASLTEVRALLRKHEAFESDLAAHQDRVEQIAAIAQELNELDYHDAV 90
Query: 579 EFKAQLPAEECAKLKEQIAELQKLIANKDSVDPEELRKATTTLQQASLKLFEMAYKKMAA 638
+ C K+ +Q L L + E L + L+ E A +
Sbjct: 91 NVNDR-----CQKICDQWDRLGTLTQKRR----EALERMEKLLETIDQLHLEFAKRAAPF 141
Query: 639 EKESSSGSSSSGSSDQTQSQEEDKKKEDKQ 668
S EE +
Sbjct: 142 NNWMEGAMEDLQDMFIVHSIEEIQSLITAH 171
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum,
manolate, transferase, structural genomi 2; HET: ADP
XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Length = 511
Score = 30.7 bits (70), Expect = 1.8
Identities = 8/63 (12%), Positives = 16/63 (25%), Gaps = 6/63 (9%)
Query: 320 KNSDIGEVLLVGGMTRMP---KVQSTVQEIFGKVPSRAVNPDEAVAIGAAVQGGVLAGDV 376
+G + +VGG R ++ + + G A V
Sbjct: 399 GMEKVGLLKVVGGGARSEAWLRMIAD---NLNVSLLVKPDAHLHPLRGLAALAAVELEWS 455
Query: 377 TDV 379
+
Sbjct: 456 HSI 458
>3u1k_A Polyribonucleotide nucleotidyltransferase 1, MITO; RNAse PH, KH
domain, exoribonuclease; HET: CIT; 2.13A {Homo sapiens}
Length = 630
Score = 30.6 bits (70), Expect = 1.9
Identities = 13/66 (19%), Positives = 22/66 (33%), Gaps = 8/66 (12%)
Query: 536 KDEIENMVKNAEQYATEDKVKRDRVEALNQAESIVHDTESKMEEFKAQLPAEECAKLKEQ 595
+ DKV RD EA+N+ E+ K + P + ++ E
Sbjct: 249 HKLAMERLYAVFTDYEHDKVSRD--EAVNKIR------LDTEEQLKEKFPEADPYEIIES 300
Query: 596 IAELQK 601
+ K
Sbjct: 301 FNVVAK 306
>3kbt_A Beta-I spectrin, spectrin beta chain, erythrocyte; complex,
spectrin, spectrin repeat, three helix bundle, ANKY
binding, disease mutation, structural protein, ZU5
sandwich; 2.75A {Homo sapiens} PDB: 3kbu_A
Length = 326
Score = 29.9 bits (67), Expect = 2.9
Identities = 16/106 (15%), Positives = 38/106 (35%), Gaps = 9/106 (8%)
Query: 537 DEIENMVKNAEQYATEDKVKRDRVEALNQAESIVHDTESKMEEFKAQLPAEECAKLKEQI 596
D++E + E A+ ++ +D + K +F + A ++
Sbjct: 120 DDLEQWISEKELVASSPEMGQDFDHVTLLRD--------KFRDFARETGAIGQERVDNVN 171
Query: 597 AELQKLIANKDSVDPEELRKATTTLQQASLKLFEMAYKKMAAEKES 642
A +++LI + + + + L + L E+ +M S
Sbjct: 172 AFIERLI-DAGHSEAATIAEWKDGLNEMWADLLELIDTRMQLLAAS 216
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain
12444, SGX, transferase; 2.50A {Novosphingobium
aromaticivorans}
Length = 482
Score = 29.8 bits (67), Expect = 3.2
Identities = 17/120 (14%), Positives = 28/120 (23%), Gaps = 28/120 (23%)
Query: 273 LPYLTMDAGGP------KHMNLKLTRSKFESLVGDLIKKTVNPCQKALQDADC--KNSDI 324
LP L M GP +N + + AL
Sbjct: 339 LPTL-MRGFGPYPHGRFAWINRPEDWFERRAAACLYA---------ALVADTALDLIGST 388
Query: 325 GEVLLVGGMTRMPKVQSTV--Q---EIFGKVPSRAVNPDEAVAIGAAVQGGVLAGDVTDV 379
G +L+ G + V + + N V+ GA ++
Sbjct: 389 GRILVEGRFAE-----ADVFVRALASLRPDCAVYTANAHNDVSFGALRLIDPGLRPQGEL 443
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold,
metal binding protein; HET: ADP; 3.00A {Acidaminococcus
fermentans} SCOP: c.55.1.5
Length = 270
Score = 29.4 bits (66), Expect = 3.3
Identities = 11/52 (21%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Query: 319 CKNSDIGE-VLLVGGMTRMPKVQSTVQEIFGKVPSRAVNPDEAVAIGAAVQG 369
I + V++ GG+ + V+ ++E G + A+GAA+
Sbjct: 203 ANRVGIVKDVVMTGGVAQNYGVRGALEEGLGVEIKTSPLAQYNGALGAALYA 254
>3dee_A Putative regulatory protein; structural genomics, joint CENT
structural genomics, JCSG, protein structure initiative;
2.10A {Neisseria gonorrhoeae fa 1090}
Length = 249
Score = 29.1 bits (65), Expect = 4.0
Identities = 8/74 (10%), Positives = 25/74 (33%)
Query: 348 GKVPSRAVNPDEAVAIGAAVQGGVLAGDVTDVLLLDVTPLSLGIETLGGVFTRLITRNTT 407
V + ++ + + + + + L+ + L G ++ I +
Sbjct: 167 DDVMYQTLDGFDMMLLEIMGSSALSFDTLAQTLVEFMPKADNWKNILLGKWSGWIEQRII 226
Query: 408 IPTKKSQGGVLAGD 421
IP+ + + G+
Sbjct: 227 IPSLSAISENMEGN 240
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold,
ATPase, electron transfer, ATP/ADP binding; HET: ANP;
1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Length = 276
Score = 29.1 bits (65), Expect = 4.2
Identities = 11/52 (21%), Positives = 19/52 (36%), Gaps = 1/52 (1%)
Query: 319 CKNSDIGE-VLLVGGMTRMPKVQSTVQEIFGKVPSRAVNPDEAVAIGAAVQG 369
K + V++VGG+ R + + P A+GAA+
Sbjct: 201 VKRIGVQRNVVMVGGVARNSGIVRAMAREINTEIIVPDIPQLTGALGAALYA 252
>1m7k_A Silencer of death domains; three helix bundle, chaperone; NMR {Homo
sapiens} SCOP: a.7.7.1
Length = 99
Score = 27.7 bits (61), Expect = 4.4
Identities = 20/94 (21%), Positives = 34/94 (36%), Gaps = 9/94 (9%)
Query: 544 KNAEQYATEDKVKRDRVEALNQAESIVHDTESKMEEFKAQLPAEECAKLKEQIAELQKLI 603
E+ D+ ++ + V E ++EEF + + L+E L K +
Sbjct: 7 SLPEECVPSDESTPPSIKKIIHVLEKVQYLEQEVEEFVGKKTDKAYWLLEEM---LTKEL 63
Query: 604 ANKDSVDPE------ELRKATTTLQQASLKLFEM 631
DSV+ + RK QA L+ E
Sbjct: 64 LELDSVETGGQDSVRQARKEAVCKIQAILEKLEK 97
>3i00_A HIP-I, huntingtin-interacting protein 1; transcription; 2.30A {Homo
sapiens} PDB: 2qa7_A
Length = 120
Score = 28.2 bits (62), Expect = 4.4
Identities = 19/103 (18%), Positives = 41/103 (39%), Gaps = 6/103 (5%)
Query: 540 ENMVKNAEQYATEDKVKRDRVEALNQAESIVHDTESKMEEFKAQLPAEECAKLKEQIAEL 599
+N V E+ +++ R+ Q E++ +++ + + K + E A L EQ
Sbjct: 5 QNGVNKDEKDHLIERLYREISGLKAQLENMKTESQRVVLQLKGHVSELE-ADLAEQQHLR 63
Query: 600 QKLIANKDSVDPEELRKATTTLQQASLKLFEMAYKKMAAEKES 642
Q+ + D E LR L++ + E+++
Sbjct: 64 QQA-----ADDCEFLRAELDELRRQREDTEKAQRSLSEIERKA 101
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis;
HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP:
a.151.1.1 c.2.1.7 d.58.39.1
Length = 404
Score = 29.1 bits (66), Expect = 4.8
Identities = 12/102 (11%), Positives = 38/102 (37%), Gaps = 13/102 (12%)
Query: 553 DKVKRDRVEALNQAESIVHDTESKMEEFKAQLPAEECA----KLKEQI-----AELQKLI 603
+ R + + + E ++ E ++ + +L + + + + EL++ +
Sbjct: 294 RENLERRRKEIPKVEKLI---EEELSTVEEELEKLKERRLVADVAKSLHEIKDRELERAL 350
Query: 604 ANKDSVDPEE-LRKATTTLQQASLKLFEMAYKKMAAEKESSS 644
+ DPE L+ + + + A ++ E ++
Sbjct: 351 RRLKTGDPENVLQDFAEAYTKRLINVLTSAIMELPDEYRRAA 392
>3pie_A 5'->3' exoribonuclease (XRN1); beta berrel, tudor domain, chromo
domain, mRNA turnover, RRN processing, RNA binding, DNA
binding; 2.90A {Kluyveromyces lactis} PDB: 3pif_A
Length = 1155
Score = 29.2 bits (64), Expect = 6.3
Identities = 18/137 (13%), Positives = 47/137 (34%), Gaps = 12/137 (8%)
Query: 505 IDANGIVHVSARDKGTGKEQQIVIQSSGGLSKDEI-ENMVKNAEQYATEDKVKRDRVEAL 563
+D N I+H G+ + + LS++E+ + + K K+ A+
Sbjct: 34 LDMNSILHNCTHGDGS--------EVNSRLSEEEVYSKIFSYIDHLFHTIKPKQTFYMAI 85
Query: 564 NQAESIVHDTESKMEEFKAQLPAEECAKLKEQIAELQKLIANKDSVDPEELRKATTTLQQ 623
+ + + F+ + + K ++ E + + D + T + +
Sbjct: 86 DGVAPRAKMNQQRARRFRTAM---DAEKALQKAIENGDELPKGEPFDSNAITPGTEFMAK 142
Query: 624 ASLKLFEMAYKKMAAEK 640
+ L + K+ +
Sbjct: 143 LTENLKYFIHDKITNDT 159
>1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand,
cross-reactivity; 1.75A {Phleum pratense} SCOP:
a.39.1.10
Length = 78
Score = 26.4 bits (59), Expect = 7.6
Identities = 9/44 (20%), Positives = 19/44 (43%), Gaps = 8/44 (18%)
Query: 503 FDIDANGIVHVSARDKGTGKEQQIVIQSSGGLSKDEIENMVKNA 546
FD + +G + + E +++ G S DE++ M+
Sbjct: 12 FDTNGDGKI--------SLSELTDALRTLGSTSADEVQRMMAEI 47
>3fb2_A Spectrin alpha chain, brain spectrin; non-erythroid alpha chain
alpha-II spectrin, fordrin alpha chain, sptan1,
SPTA2_human, NESG, HR5563A; 2.30A {Homo sapiens}
Length = 218
Score = 28.0 bits (62), Expect = 7.8
Identities = 15/82 (18%), Positives = 35/82 (42%), Gaps = 4/82 (4%)
Query: 520 TGKEQQIVIQSSGGLSKDEIENMVKNAEQYATEDKVKRDRVEALNQ-AESIVHDTESKME 578
+E + + G S D +E ++K E + V+ +++ AL A+ ++
Sbjct: 136 AAREAFLNTEDKGD-SLDSVEALIKKHEDFDKAINVQEEKIAALQAFADQLIAAGHYAKG 194
Query: 579 EFKAQLPA--EECAKLKEQIAE 598
+ ++ + +LK Q+ E
Sbjct: 195 DISSRRNEVLDRWRRLKAQMIE 216
>3h05_A Uncharacterized protein VPA0413; nucleotidylyl, transferase, MCSG,
midwest center for structu genomics, PSI; 1.65A {Vibrio
parahaemolyticus}
Length = 177
Score = 27.5 bits (62), Expect = 9.7
Identities = 7/48 (14%), Positives = 16/48 (33%)
Query: 541 NMVKNAEQYATEDKVKRDRVEALNQAESIVHDTESKMEEFKAQLPAEE 588
+V + V+R +E T + +E+ + P +
Sbjct: 53 KLVDAFIKDMGLSNVQRSDLEQALYQPGQSVTTYALLEKIQEIYPTAD 100
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.311 0.128 0.343
Gapped
Lambda K H
0.267 0.0613 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 9,496,140
Number of extensions: 595276
Number of successful extensions: 1572
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1499
Number of HSP's successfully gapped: 126
Length of query: 668
Length of database: 6,701,793
Length adjustment: 100
Effective length of query: 568
Effective length of database: 3,909,693
Effective search space: 2220705624
Effective search space used: 2220705624
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 61 (27.5 bits)