Query psy3923
Match_columns 73
No_of_seqs 141 out of 1045
Neff 7.9
Searched_HMMs 46136
Date Fri Aug 16 20:50:28 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3923.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/3923hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0750|consensus 99.0 9.2E-10 2E-14 73.1 4.5 54 14-72 201-254 (304)
2 KOG0753|consensus 98.9 1.5E-09 3.2E-14 73.0 3.7 61 11-71 6-68 (317)
3 KOG0754|consensus 98.9 9.4E-11 2E-15 77.4 -2.3 51 21-72 4-54 (294)
4 KOG0752|consensus 98.8 4E-09 8.6E-14 71.7 4.4 38 20-57 219-256 (320)
5 PTZ00168 mitochondrial carrier 98.8 5E-09 1.1E-13 68.7 3.8 47 24-70 3-49 (259)
6 KOG0751|consensus 98.8 1.6E-09 3.4E-14 77.3 1.3 48 25-72 347-394 (694)
7 KOG0762|consensus 98.8 5E-09 1.1E-13 69.3 2.6 38 20-57 197-234 (311)
8 PF00153 Mito_carr: Mitochondr 98.7 1.3E-08 2.9E-13 57.0 3.1 32 22-53 2-33 (95)
9 KOG0753|consensus 98.7 2.1E-09 4.5E-14 72.3 -0.4 52 20-71 120-171 (317)
10 KOG0758|consensus 98.7 1.7E-08 3.7E-13 67.8 3.6 39 18-56 203-241 (297)
11 KOG0760|consensus 98.7 1.5E-08 3.3E-13 67.6 3.1 39 20-58 198-236 (302)
12 PTZ00169 ADP/ATP transporter o 98.7 1.1E-08 2.3E-13 68.1 2.1 36 21-56 4-39 (300)
13 KOG0764|consensus 98.6 8.3E-09 1.8E-13 69.1 0.7 49 21-72 102-150 (299)
14 KOG0755|consensus 98.6 6.7E-09 1.5E-13 68.8 0.2 69 1-71 1-70 (320)
15 KOG0757|consensus 98.6 1.5E-08 3.3E-13 67.8 1.7 35 21-55 5-39 (319)
16 KOG0752|consensus 98.6 2.6E-08 5.7E-13 67.8 2.5 37 21-57 123-159 (320)
17 KOG0762|consensus 98.6 6E-08 1.3E-12 64.3 4.0 40 18-57 98-137 (311)
18 PTZ00169 ADP/ATP transporter o 98.6 8.6E-08 1.9E-12 63.8 4.0 33 24-56 113-145 (300)
19 KOG0751|consensus 98.5 4.3E-08 9.2E-13 70.2 2.1 51 18-72 532-582 (694)
20 PTZ00168 mitochondrial carrier 98.5 1.3E-07 2.8E-12 62.0 4.1 34 23-56 178-211 (259)
21 KOG0758|consensus 98.5 2.1E-08 4.5E-13 67.4 -0.6 36 23-58 12-47 (297)
22 KOG0768|consensus 98.5 1.4E-07 3.1E-12 64.1 3.3 39 20-58 223-261 (323)
23 KOG0757|consensus 98.4 3.7E-08 8.1E-13 66.0 0.2 40 19-58 122-161 (319)
24 KOG0764|consensus 98.4 1.4E-07 3E-12 63.3 2.5 33 24-56 5-37 (299)
25 KOG0770|consensus 98.4 1.6E-07 3.6E-12 63.0 2.4 39 19-57 230-268 (353)
26 KOG0759|consensus 98.3 5.1E-07 1.1E-11 60.4 3.5 55 17-72 89-143 (286)
27 KOG0760|consensus 98.3 1.4E-06 3E-11 58.4 5.0 40 17-56 9-48 (302)
28 KOG0749|consensus 98.3 8.5E-07 1.8E-11 59.3 3.5 52 19-72 7-58 (298)
29 KOG0761|consensus 98.3 3.3E-07 7.1E-12 62.6 1.5 39 19-57 257-295 (361)
30 KOG0759|consensus 98.3 1E-06 2.2E-11 59.0 3.7 36 21-56 194-229 (286)
31 KOG0754|consensus 98.2 1.8E-06 3.9E-11 57.4 3.3 38 18-55 196-233 (294)
32 KOG0036|consensus 98.1 3.2E-07 7E-12 64.3 -0.7 40 18-57 181-220 (463)
33 KOG0769|consensus 98.1 1.5E-06 3.2E-11 58.3 2.3 33 24-56 3-35 (308)
34 KOG0766|consensus 98.1 1.4E-06 3E-11 57.4 2.1 32 25-56 214-245 (297)
35 KOG0761|consensus 98.1 1.2E-06 2.6E-11 59.9 1.7 42 17-58 13-54 (361)
36 KOG0756|consensus 98.1 9.3E-07 2E-11 59.6 0.9 42 17-58 202-243 (299)
37 KOG0750|consensus 98.1 9E-07 2E-11 59.1 0.2 51 20-72 4-54 (304)
38 KOG0755|consensus 97.9 3.1E-07 6.6E-12 61.0 -3.7 59 14-72 117-175 (320)
39 KOG0765|consensus 97.9 7.7E-06 1.7E-10 55.3 2.2 37 22-58 244-280 (333)
40 KOG0036|consensus 97.8 6.6E-06 1.4E-10 57.9 1.2 38 20-57 278-315 (463)
41 KOG0770|consensus 97.8 2.8E-05 6E-10 52.5 3.7 40 19-58 122-161 (353)
42 KOG0763|consensus 97.7 4.1E-06 9E-11 55.1 -1.1 39 20-58 212-250 (301)
43 KOG0769|consensus 97.7 5.1E-05 1.1E-09 51.1 3.8 39 19-57 97-135 (308)
44 KOG0756|consensus 97.7 7E-06 1.5E-10 55.5 -0.6 35 23-57 13-47 (299)
45 KOG0766|consensus 97.6 3.3E-05 7.2E-10 51.0 1.8 35 23-57 13-47 (297)
46 KOG0768|consensus 97.6 0.00011 2.3E-09 50.3 4.0 38 20-57 132-169 (323)
47 KOG0765|consensus 97.2 0.00015 3.2E-09 49.2 0.9 40 19-58 28-67 (333)
48 KOG1519|consensus 96.8 0.0016 3.4E-08 42.6 3.5 34 24-57 211-244 (297)
49 KOG0749|consensus 96.8 0.0023 5E-08 43.2 3.9 50 18-72 207-256 (298)
50 KOG0763|consensus 96.6 0.0028 6.1E-08 42.0 3.3 39 19-57 107-145 (301)
51 KOG2954|consensus 96.2 0.0063 1.4E-07 42.4 3.6 51 22-72 274-334 (427)
52 KOG0767|consensus 95.7 0.0035 7.6E-08 42.6 0.5 36 23-58 134-169 (333)
53 KOG0767|consensus 94.9 0.023 4.9E-07 38.7 2.3 40 18-57 230-269 (333)
54 PF12732 YtxH: YtxH-like prote 81.7 1.7 3.6E-05 23.4 2.3 23 24-46 1-23 (74)
55 KOG1519|consensus 76.9 3 6.6E-05 27.5 2.7 35 22-56 28-62 (297)
56 KOG2745|consensus 76.4 4.7 0.0001 27.7 3.6 35 20-58 16-50 (321)
57 KOG2745|consensus 67.5 3.5 7.5E-05 28.4 1.4 45 23-71 132-179 (321)
58 COG4980 GvpP Gas vesicle prote 65.0 9.9 0.00022 22.6 2.9 26 21-46 4-29 (115)
59 PF13940 Ldr_toxin: Toxin Ldr, 64.8 10 0.00022 17.8 2.3 24 23-46 9-32 (35)
60 PF10399 UCR_Fe-S_N: Ubiquitin 59.3 13 0.00027 18.1 2.2 18 28-45 17-34 (41)
61 PF04418 DUF543: Domain of unk 40.2 20 0.00043 19.7 1.3 17 26-42 31-47 (75)
62 KOG4085|consensus 36.5 1.1E+02 0.0024 19.2 5.8 51 6-56 8-68 (175)
63 COG1963 Uncharacterized protei 34.7 48 0.001 20.7 2.5 28 27-54 12-39 (153)
64 PF00473 CRF: Corticotropin-re 33.9 31 0.00067 16.6 1.3 16 41-56 6-21 (39)
65 PF01102 Glycophorin_A: Glycop 33.2 72 0.0016 19.1 3.0 17 25-41 66-82 (122)
66 KOG1746|consensus 33.2 64 0.0014 19.1 2.7 12 48-59 73-84 (115)
67 PF06946 Phage_holin_5: Phage 29.3 64 0.0014 18.5 2.2 20 22-41 58-77 (93)
68 PF02830 V4R: V4R domain; Int 27.7 57 0.0012 16.6 1.8 20 26-45 22-41 (62)
69 smart00039 CRF corticotropin-r 24.6 64 0.0014 15.6 1.5 16 41-56 7-22 (40)
70 PF09062 Endonuc_subdom: PI-Pf 21.2 88 0.0019 17.7 1.8 14 23-36 8-21 (98)
No 1
>KOG0750|consensus
Probab=98.96 E-value=9.2e-10 Score=73.11 Aligned_cols=54 Identities=28% Similarity=0.349 Sum_probs=43.4
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHhHhhhhccHHHHHHHHhhcccccccccccccccccc
Q psy3923 14 MAPALADPVAFAKDFIAGGVSAAVSKTAVAPIERVKLLLQVQHISKQISEEQRYKADFL 72 (73)
Q Consensus 14 ~~~~~~~~~~~~~~~~aG~~aG~~~~~~~~P~d~vKtrlQ~q~~~~~~~~~~~y~g~~~ 72 (73)
..++.+....|+.+|++|+++|+.+.+++.|+||||||+|+-.. +...|+|++|
T Consensus 201 r~~D~Sg~avF~~sF~agl~~gs~sa~~vtPlDVvKTRiQ~~~~-----ned~~~gi~d 254 (304)
T KOG0750|consen 201 RKKDGSGAAVFYQSFLAGLVAGSASAIVVTPLDVVKTRIQTLGD-----NEDNYKGIFD 254 (304)
T ss_pred CCCCcccchhhHHHHHHHHHhhhhhhhhcccHHHHHHHHhhccc-----CccccccHHH
Confidence 34566777889999999999999999999999999999996532 3345666654
No 2
>KOG0753|consensus
Probab=98.90 E-value=1.5e-09 Score=73.02 Aligned_cols=61 Identities=25% Similarity=0.365 Sum_probs=47.1
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHhHhhhhccHHHHHHHHhhcccccccc-cc-ccccccc
Q psy3923 11 PMPMAPALADPVAFAKDFIAGGVSAAVSKTAVAPIERVKLLLQVQHISKQIS-EE-QRYKADF 71 (73)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~aG~~aG~~~~~~~~P~d~vKtrlQ~q~~~~~~~-~~-~~y~g~~ 71 (73)
+|........+...+..|+.+++|.+++.++++|+|+.|+|||+|++..... .. .+|||++
T Consensus 6 ~~~~~~~~~~~~~~~~~f~~a~~aA~vAE~~TfPlD~tKtRLQiQGe~~~~~~~~~~~YrG~~ 68 (317)
T KOG0753|consen 6 PMVGPVKSDVPPTLAVKFLLAGTAACVAELVTFPLDTTKTRLQIQGESAAAVFKKGAKYRGML 68 (317)
T ss_pred cccccCcccCCccchhHHHHHHHHHHHHHHhccccchhhhhhhccccccccccccccccccHH
Confidence 4444444555777889999999999999999999999999999998753222 12 4788875
No 3
>KOG0754|consensus
Probab=98.88 E-value=9.4e-11 Score=77.38 Aligned_cols=51 Identities=24% Similarity=0.385 Sum_probs=39.6
Q ss_pred ChhHHHHHHHHHHHHHhHhhhhccHHHHHHHHhhcccccccccccccccccc
Q psy3923 21 PVAFAKDFIAGGVSAAVSKTAVAPIERVKLLLQVQHISKQISEEQRYKADFL 72 (73)
Q Consensus 21 ~~~~~~~~~aG~~aG~~~~~~~~P~d~vKtrlQ~q~~~~~~~~~~~y~g~~~ 72 (73)
+.++..+|+||+.||+...++.+|+|+||||||+|.... ..+...|+|++|
T Consensus 4 ~~~~~~Qf~AGg~AG~~Ev~~myPLDVVKTRmQlq~~~~-~~~~~~Y~g~~D 54 (294)
T KOG0754|consen 4 PLPAIRQFLAGGSAGFSEVCLMYPLDVVKTRMQLQVTTP-FGGEVHYNGVMD 54 (294)
T ss_pred ccccceeeecccccchhhheeecchhhheeeeeeecccC-CCCccccccHHH
Confidence 456777999999999999999999999999999996421 223445665554
No 4
>KOG0752|consensus
Probab=98.84 E-value=4e-09 Score=71.75 Aligned_cols=38 Identities=18% Similarity=0.391 Sum_probs=35.3
Q ss_pred CChhHHHHHHHHHHHHHhHhhhhccHHHHHHHHhhccc
Q psy3923 20 DPVAFAKDFIAGGVSAAVSKTAVAPIERVKLLLQVQHI 57 (73)
Q Consensus 20 ~~~~~~~~~~aG~~aG~~~~~~~~P~d~vKtrlQ~q~~ 57 (73)
+..+.+..|++|++||+++.++++|+|+||.|||+...
T Consensus 219 ~~~~~~~~l~~GalAG~~aqti~yPlD~vRrrmQ~~~~ 256 (320)
T KOG0752|consen 219 KELSNFERLLCGALAGAVAQTITYPLDTVRRRMQLGGL 256 (320)
T ss_pred chhhhHHHHHHHHHHHHHHhhhcccHHHHHHHHhccCc
Confidence 56778899999999999999999999999999999974
No 5
>PTZ00168 mitochondrial carrier protein; Provisional
Probab=98.81 E-value=5e-09 Score=68.71 Aligned_cols=47 Identities=15% Similarity=0.275 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHHhHhhhhccHHHHHHHHhhcccccccccccccccc
Q psy3923 24 FAKDFIAGGVSAAVSKTAVAPIERVKLLLQVQHISKQISEEQRYKAD 70 (73)
Q Consensus 24 ~~~~~~aG~~aG~~~~~~~~P~d~vKtrlQ~q~~~~~~~~~~~y~g~ 70 (73)
.+.++++|++||+++.++++|+|++|+|+|++......+-...|||+
T Consensus 3 ~~~~~~aG~~ag~~~~~~~~Pld~vKtR~Q~~~~~~~eG~~glyrG~ 49 (259)
T PTZ00168 3 HFHNLVTGALSGVIVDAVLYPIDSIKTNIQAKKSFSFSDIKKLYSGI 49 (259)
T ss_pred cHHHHHHHHHHHHHHHHHcCcHHHHHHHHHccccchhcchhhhhcCh
Confidence 45789999999999999999999999999998632122223456664
No 6
>KOG0751|consensus
Probab=98.80 E-value=1.6e-09 Score=77.31 Aligned_cols=48 Identities=42% Similarity=0.446 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHHhHhhhhccHHHHHHHHhhcccccccccccccccccc
Q psy3923 25 AKDFIAGGVSAAVSKTAVAPIERVKLLLQVQHISKQISEEQRYKADFL 72 (73)
Q Consensus 25 ~~~~~aG~~aG~~~~~~~~P~d~vKtrlQ~q~~~~~~~~~~~y~g~~~ 72 (73)
..+|..|.+||+++.+++||+|+||||||.|.......++-.|++.||
T Consensus 347 aYrF~LGSvAGavGATaVYPIDlvKTRMQnQRs~gs~vge~~YkNS~D 394 (694)
T KOG0751|consen 347 AYRFTLGSVAGAVGATAVYPIDLVKTRMQNQRSSGSFVGELMYKNSFD 394 (694)
T ss_pred HHhhcchhhhccccceeEeeHHHHHHHHHhhccccceeehhhhcchHH
Confidence 357889999999999999999999999999987644556667777665
No 7
>KOG0762|consensus
Probab=98.76 E-value=5e-09 Score=69.30 Aligned_cols=38 Identities=29% Similarity=0.414 Sum_probs=34.2
Q ss_pred CChhHHHHHHHHHHHHHhHhhhhccHHHHHHHHhhccc
Q psy3923 20 DPVAFAKDFIAGGVSAAVSKTAVAPIERVKLLLQVQHI 57 (73)
Q Consensus 20 ~~~~~~~~~~aG~~aG~~~~~~~~P~d~vKtrlQ~q~~ 57 (73)
..++....++||+.+|+.+|+.+||+|+||+|||.+..
T Consensus 197 ~~l~v~~lL~AGG~aGm~SWla~Yp~DVVKtrlQad~~ 234 (311)
T KOG0762|consen 197 GQLNVRTLLVAGGTAGMASWLACYPLDVVKTRLQADHL 234 (311)
T ss_pred cccchhhhhhhcchhhHHHHHHhccHHHHHHHHhcccc
Confidence 35677789999999999999999999999999998864
No 8
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ]. Such proteins include: ADP, ATP carrier protein (ADP/ATP translocase); 2-oxoglutarate/malate carrier protein; phosphate carrier protein; tricarboxylate transport protein (or citrate transport protein); Graves disease carrier protein; yeast mitochondrial proteins MRS3 and MRS4; yeast mitochondrial FAD carrier protein; and many others. Structurally, these proteins can consist of up to three tandem repeats of a domain of approximately 100 residues, each domain containing two transmembrane regions.; PDB: 2LCK_A 2C3E_A 1OKC_A.
Probab=98.71 E-value=1.3e-08 Score=56.97 Aligned_cols=32 Identities=31% Similarity=0.614 Sum_probs=30.0
Q ss_pred hhHHHHHHHHHHHHHhHhhhhccHHHHHHHHh
Q psy3923 22 VAFAKDFIAGGVSAAVSKTAVAPIERVKLLLQ 53 (73)
Q Consensus 22 ~~~~~~~~aG~~aG~~~~~~~~P~d~vKtrlQ 53 (73)
.+++..+++|+++|+++.++++|+|++|+|+|
T Consensus 2 ~~~~~~~~~g~~ag~~~~~~~~Pld~ik~~~q 33 (95)
T PF00153_consen 2 LSFFANFIAGALAGAISTLVTYPLDTIKTRMQ 33 (95)
T ss_dssp CCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHhHHHHHhHhhc
Confidence 45678999999999999999999999999999
No 9
>KOG0753|consensus
Probab=98.71 E-value=2.1e-09 Score=72.30 Aligned_cols=52 Identities=19% Similarity=0.364 Sum_probs=44.5
Q ss_pred CChhHHHHHHHHHHHHHhHhhhhccHHHHHHHHhhccccccccccccccccc
Q psy3923 20 DPVAFAKDFIAGGVSAAVSKTAVAPIERVKLLLQVQHISKQISEEQRYKADF 71 (73)
Q Consensus 20 ~~~~~~~~~~aG~~aG~~~~~~~~P~d~vKtrlQ~q~~~~~~~~~~~y~g~~ 71 (73)
...+.|..+++|..+|+++.++.+|.|+||+|||.++.....+.+++|+|.+
T Consensus 120 ~~~~l~~~~l~G~taGaia~~~AnPtDlVKVrmQaeG~~~~~g~~~Ry~g~~ 171 (317)
T KOG0753|consen 120 ESLPLWKSILCGVTAGAIAQALANPTDLVKVRMQAEGRLRLQGEPPRYSGTL 171 (317)
T ss_pred ccccHHHHHHHHHhhhHHHHHhcCccceEEEEeeehhhhcccCCCCccccHH
Confidence 6788999999999999999999999999999999998765444566676654
No 10
>KOG0758|consensus
Probab=98.69 E-value=1.7e-08 Score=67.82 Aligned_cols=39 Identities=31% Similarity=0.239 Sum_probs=35.7
Q ss_pred CCCChhHHHHHHHHHHHHHhHhhhhccHHHHHHHHhhcc
Q psy3923 18 LADPVAFAKDFIAGGVSAAVSKTAVAPIERVKLLLQVQH 56 (73)
Q Consensus 18 ~~~~~~~~~~~~aG~~aG~~~~~~~~P~d~vKtrlQ~q~ 56 (73)
.....+.|..+++|++||++.|.+++|+|++|+|||++.
T Consensus 203 ~~~~~~~~~~~~aGg~aG~a~W~~v~P~DvvKS~iQt~~ 241 (297)
T KOG0758|consen 203 DRSLVPTWKLLLAGGLAGIAFWLAVFPFDVVKSRLQTDP 241 (297)
T ss_pred ccCccchHHHHHhhhHHHHhhHhhhccHHHHHHHHhcCC
Confidence 345778899999999999999999999999999999994
No 11
>KOG0760|consensus
Probab=98.68 E-value=1.5e-08 Score=67.58 Aligned_cols=39 Identities=31% Similarity=0.365 Sum_probs=34.7
Q ss_pred CChhHHHHHHHHHHHHHhHhhhhccHHHHHHHHhhcccc
Q psy3923 20 DPVAFAKDFIAGGVSAAVSKTAVAPIERVKLLLQVQHIS 58 (73)
Q Consensus 20 ~~~~~~~~~~aG~~aG~~~~~~~~P~d~vKtrlQ~q~~~ 58 (73)
+..+...+.++|+++|.++..++.|||+|||+||+|...
T Consensus 198 ~~y~p~ih~i~GalaGa~Aaa~TTPLDvvKT~Lq~q~s~ 236 (302)
T KOG0760|consen 198 RKYNPLIHIIAGALAGALAAALTTPLDVVKTLLQTQGSS 236 (302)
T ss_pred cccCcHHHHHhhhhhHHHHHHhCCcHHHHHHHHHhhcch
Confidence 344777899999999999999999999999999999753
No 12
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional
Probab=98.67 E-value=1.1e-08 Score=68.15 Aligned_cols=36 Identities=67% Similarity=0.988 Sum_probs=32.4
Q ss_pred ChhHHHHHHHHHHHHHhHhhhhccHHHHHHHHhhcc
Q psy3923 21 PVAFAKDFIAGGVSAAVSKTAVAPIERVKLLLQVQH 56 (73)
Q Consensus 21 ~~~~~~~~~aG~~aG~~~~~~~~P~d~vKtrlQ~q~ 56 (73)
..+++.++++|+++|+++.++++|+|+||+|||++.
T Consensus 4 ~~~~~~~~~aG~~ag~~~~~~~~Pld~vKtrlQ~~~ 39 (300)
T PTZ00169 4 KTNFATDFLMGGISAAISKTAVAPIERVKMLIQTQD 39 (300)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcCcHhHheeeeeccc
Confidence 345678899999999999999999999999999985
No 13
>KOG0764|consensus
Probab=98.63 E-value=8.3e-09 Score=69.05 Aligned_cols=49 Identities=20% Similarity=0.212 Sum_probs=41.4
Q ss_pred ChhHHHHHHHHHHHHHhHhhhhccHHHHHHHHhhcccccccccccccccccc
Q psy3923 21 PVAFAKDFIAGGVSAAVSKTAVAPIERVKLLLQVQHISKQISEEQRYKADFL 72 (73)
Q Consensus 21 ~~~~~~~~~aG~~aG~~~~~~~~P~d~vKtrlQ~q~~~~~~~~~~~y~g~~~ 72 (73)
.+++..++.+++.||++..++++|+++||+||++|.... ....|+|++|
T Consensus 102 ~l~~~~~l~sa~~AGa~t~~lTNPIWVvKTRL~~Q~~~~---~~~~Y~~~f~ 150 (299)
T KOG0764|consen 102 LLSVLANLSSAAEAGAATTILTNPIWVVKTRLMLQSKNV---QSTAYKGMFD 150 (299)
T ss_pred cchHHHHHHHHHhhhHHHHHhcCCeEEEeehhhhhcccc---cccccccHHH
Confidence 368889999999999999999999999999999998542 3356777665
No 14
>KOG0755|consensus
Probab=98.62 E-value=6.7e-09 Score=68.80 Aligned_cols=69 Identities=25% Similarity=0.249 Sum_probs=46.2
Q ss_pred CCccccCCCCCCCCCCCCCCChhHHHHHHHHHHHHHhHhhhhccHHHHHHHHhhccccccc-cccccccccc
Q psy3923 1 MSKTVQKQEAPMPMAPALADPVAFAKDFIAGGVSAAVSKTAVAPIERVKLLLQVQHISKQI-SEEQRYKADF 71 (73)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aG~~aG~~~~~~~~P~d~vKtrlQ~q~~~~~~-~~~~~y~g~~ 71 (73)
||++..++.++-.+ .....+.....|++|++|.|.+.++++|+|++|+|+|+|++.... ...+.|+++.
T Consensus 1 ms~~~~k~~~~~~~--t~~~k~~~~s~Fv~GGlAa~gA~~~TNPiEvIKtRiQLQGelaa~g~~a~~YKsv~ 70 (320)
T KOG0755|consen 1 MSEKTIKALPAHNP--TQVKKLMATSDFVLGGLAACGAVTFTNPIEVIKTRIQLQGELAARGPSARPYKSVG 70 (320)
T ss_pred CCccchhhccccCH--HHHHhhhcccchhhcchhhheeeEecChHHHhhhhhhhhhhhhccCCccchhhhhh
Confidence 66664444443221 122244445678999999999999999999999999999976332 1234566653
No 15
>KOG0757|consensus
Probab=98.62 E-value=1.5e-08 Score=67.83 Aligned_cols=35 Identities=34% Similarity=0.433 Sum_probs=32.9
Q ss_pred ChhHHHHHHHHHHHHHhHhhhhccHHHHHHHHhhc
Q psy3923 21 PVAFAKDFIAGGVSAAVSKTAVAPIERVKLLLQVQ 55 (73)
Q Consensus 21 ~~~~~~~~~aG~~aG~~~~~~~~P~d~vKtrlQ~q 55 (73)
..+.+.+|+||+++|.+++++++|+|+||||||..
T Consensus 5 ~~~~l~h~~AGg~gGtvgAi~TCPLdVVKTRLQss 39 (319)
T KOG0757|consen 5 ERETLVHFIAGGVGGTVGAIFTCPLDVVKTRLQSS 39 (319)
T ss_pred chhHHHHHhccccccccceeEeccHHHHHHHHHhh
Confidence 36778999999999999999999999999999988
No 16
>KOG0752|consensus
Probab=98.60 E-value=2.6e-08 Score=67.77 Aligned_cols=37 Identities=19% Similarity=0.284 Sum_probs=34.3
Q ss_pred ChhHHHHHHHHHHHHHhHhhhhccHHHHHHHHhhccc
Q psy3923 21 PVAFAKDFIAGGVSAAVSKTAVAPIERVKLLLQVQHI 57 (73)
Q Consensus 21 ~~~~~~~~~aG~~aG~~~~~~~~P~d~vKtrlQ~q~~ 57 (73)
..+.+.+|++|++||+++.++++|+|++|+||-.|..
T Consensus 123 ~~~~~~~l~aGalAG~~a~~~tyPLDlvRtRLa~q~~ 159 (320)
T KOG0752|consen 123 SLSPLVRLVAGALAGMTATLATYPLDLLRTRLAVQGE 159 (320)
T ss_pred ccchhHHHHHHHHHHHHHHHhcCcHHHhhhheeeecc
Confidence 6788899999999999999999999999999988765
No 17
>KOG0762|consensus
Probab=98.59 E-value=6e-08 Score=64.27 Aligned_cols=40 Identities=30% Similarity=0.518 Sum_probs=36.2
Q ss_pred CCCChhHHHHHHHHHHHHHhHhhhhccHHHHHHHHhhccc
Q psy3923 18 LADPVAFAKDFIAGGVSAAVSKTAVAPIERVKLLLQVQHI 57 (73)
Q Consensus 18 ~~~~~~~~~~~~aG~~aG~~~~~~~~P~d~vKtrlQ~q~~ 57 (73)
.+.+.+...+|++|+.+|++..+++.|+|++|+|||+|..
T Consensus 98 ~~dpdS~~s~fl~G~aaGa~Q~vi~aPmEl~K~rLQlqd~ 137 (311)
T KOG0762|consen 98 FDDPDSYTSHFLGGVAAGAAQSVICAPMELIKTRLQLQDQ 137 (311)
T ss_pred cCCCCcHHHHHHHHHHHhhhhhhhcchHHHHHHHHhhhcc
Confidence 3457888899999999999999999999999999999953
No 18
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional
Probab=98.56 E-value=8.6e-08 Score=63.80 Aligned_cols=33 Identities=24% Similarity=0.413 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHHHhHhhhhccHHHHHHHHhhcc
Q psy3923 24 FAKDFIAGGVSAAVSKTAVAPIERVKLLLQVQH 56 (73)
Q Consensus 24 ~~~~~~aG~~aG~~~~~~~~P~d~vKtrlQ~q~ 56 (73)
.+.++++|+++|+++.++++|+|+||+|+|.+.
T Consensus 113 ~~~~~~aG~~ag~~~~~~~~P~d~vk~r~q~~~ 145 (300)
T PTZ00169 113 FGVNILSGGLAGASSLLIVYPLDFARTRLASDI 145 (300)
T ss_pred HHHHHHHHHHHHHHHHHHhChHHHHHHHHHhhc
Confidence 457899999999999999999999999999874
No 19
>KOG0751|consensus
Probab=98.53 E-value=4.3e-08 Score=70.17 Aligned_cols=51 Identities=20% Similarity=0.214 Sum_probs=43.8
Q ss_pred CCCChhHHHHHHHHHHHHHhHhhhhccHHHHHHHHhhcccccccccccccccccc
Q psy3923 18 LADPVAFAKDFIAGGVSAAVSKTAVAPIERVKLLLQVQHISKQISEEQRYKADFL 72 (73)
Q Consensus 18 ~~~~~~~~~~~~aG~~aG~~~~~~~~P~d~vKtrlQ~q~~~~~~~~~~~y~g~~~ 72 (73)
.+...+.|..+.+|++||+-+..++.|.|+||||||+.... +...|.|+||
T Consensus 532 edg~~~p~~LlaagaiAGvPAA~LvTPaDVIKTRLQvaaRa----GqTtYnGv~d 582 (694)
T KOG0751|consen 532 EDGRVSPLTLLAAGAIAGVPAASLVTPADVIKTRLQVAARA----GQTTYNGVID 582 (694)
T ss_pred ccCCcChHHHHHHHHhcCCchhhcCCHHHHHHHHheecccc----CCceechHHH
Confidence 45677888999999999999999999999999999998632 5567888876
No 20
>PTZ00168 mitochondrial carrier protein; Provisional
Probab=98.52 E-value=1.3e-07 Score=62.03 Aligned_cols=34 Identities=15% Similarity=0.264 Sum_probs=30.9
Q ss_pred hHHHHHHHHHHHHHhHhhhhccHHHHHHHHhhcc
Q psy3923 23 AFAKDFIAGGVSAAVSKTAVAPIERVKLLLQVQH 56 (73)
Q Consensus 23 ~~~~~~~aG~~aG~~~~~~~~P~d~vKtrlQ~q~ 56 (73)
+....+++|++||++++++++|+|+||+|+|++.
T Consensus 178 ~~~~~~~aG~~ag~~a~~~t~P~DvvKtr~q~~~ 211 (259)
T PTZ00168 178 PSITSAICGGLAGGIAGFLTTPVDVIKSRQIIYG 211 (259)
T ss_pred chHHHHHHHHHHHHHHHHhCChHHHHHHHHHhcc
Confidence 4567789999999999999999999999999974
No 21
>KOG0758|consensus
Probab=98.47 E-value=2.1e-08 Score=67.43 Aligned_cols=36 Identities=39% Similarity=0.532 Sum_probs=32.8
Q ss_pred hHHHHHHHHHHHHHhHhhhhccHHHHHHHHhhcccc
Q psy3923 23 AFAKDFIAGGVSAAVSKTAVAPIERVKLLLQVQHIS 58 (73)
Q Consensus 23 ~~~~~~~aG~~aG~~~~~~~~P~d~vKtrlQ~q~~~ 58 (73)
+.+..|+||+++|++..++.+|+|+||+|+|++...
T Consensus 12 ~~~kdf~AG~~gG~~~vlVGhPfDTvKVRlQt~~~~ 47 (297)
T KOG0758|consen 12 SPLKDFVAGGVGGAAQVLVGHPFDTVKVRLQTQNTP 47 (297)
T ss_pred ccHHHHHHhhhhhhhhhhccCCccceEEeeeccCCC
Confidence 338899999999999999999999999999999754
No 22
>KOG0768|consensus
Probab=98.47 E-value=1.4e-07 Score=64.06 Aligned_cols=39 Identities=8% Similarity=0.255 Sum_probs=35.9
Q ss_pred CChhHHHHHHHHHHHHHhHhhhhccHHHHHHHHhhcccc
Q psy3923 20 DPVAFAKDFIAGGVSAAVSKTAVAPIERVKLLLQVQHIS 58 (73)
Q Consensus 20 ~~~~~~~~~~aG~~aG~~~~~~~~P~d~vKtrlQ~q~~~ 58 (73)
+.+..|...++|++||.++..++.|+|++|||||++...
T Consensus 223 ~e~~~~e~a~~Ga~AG~itA~lTTPlDViKTRiM~~~~~ 261 (323)
T KOG0768|consen 223 RELEPLEGALCGALAGGITAALTTPLDVIKTRIMLAKHG 261 (323)
T ss_pred cccCCHHHHHHHHHhhhHHhhcCChHHHHHHHHhhcccc
Confidence 577889999999999999999999999999999999753
No 23
>KOG0757|consensus
Probab=98.45 E-value=3.7e-08 Score=66.01 Aligned_cols=40 Identities=28% Similarity=0.271 Sum_probs=35.6
Q ss_pred CCChhHHHHHHHHHHHHHhHhhhhccHHHHHHHHhhcccc
Q psy3923 19 ADPVAFAKDFIAGGVSAAVSKTAVAPIERVKLLLQVQHIS 58 (73)
Q Consensus 19 ~~~~~~~~~~~aG~~aG~~~~~~~~P~d~vKtrlQ~q~~~ 58 (73)
..+.+...++.+++.||+++...++|+|+||||||++...
T Consensus 122 ~~~~S~~vHm~sAasAgf~tstatNPIWlVKTRlQLd~~~ 161 (319)
T KOG0757|consen 122 NGPESPQVHMMAAASAGFATSTATNPIWLVKTRLQLDQKS 161 (319)
T ss_pred CCCCcchhHHHHHhhhHHHHhhccCceEEEeehhhhhccc
Confidence 4466677899999999999999999999999999999864
No 24
>KOG0764|consensus
Probab=98.43 E-value=1.4e-07 Score=63.26 Aligned_cols=33 Identities=27% Similarity=0.310 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHHhHhhhhccHHHHHHHHhhcc
Q psy3923 24 FAKDFIAGGVSAAVSKTAVAPIERVKLLLQVQH 56 (73)
Q Consensus 24 ~~~~~~aG~~aG~~~~~~~~P~d~vKtrlQ~q~ 56 (73)
.|+.+++|..+|+++.++++|+|++|+|+|.+.
T Consensus 5 ~~~~~iaG~~aG~~stl~vhPlDl~K~R~qa~~ 37 (299)
T KOG0764|consen 5 QWEPLIAGLSAGFASTLVVHPLDLVKIRFQASD 37 (299)
T ss_pred chhhhhhhhhhhhhhhhhccchhHhhhhhhhcc
Confidence 356779999999999999999999999999994
No 25
>KOG0770|consensus
Probab=98.41 E-value=1.6e-07 Score=62.96 Aligned_cols=39 Identities=21% Similarity=0.325 Sum_probs=34.7
Q ss_pred CCChhHHHHHHHHHHHHHhHhhhhccHHHHHHHHhhccc
Q psy3923 19 ADPVAFAKDFIAGGVSAAVSKTAVAPIERVKLLLQVQHI 57 (73)
Q Consensus 19 ~~~~~~~~~~~aG~~aG~~~~~~~~P~d~vKtrlQ~q~~ 57 (73)
....+....++.|++||.++.+++.|+|+||+|+|+|..
T Consensus 230 ~g~~s~~~elvtG~lAGglag~lTTPlDVvKTRlQtq~~ 268 (353)
T KOG0770|consen 230 YGVNSSIEELVTGGLAGGLAGYLTTPLDVVKTRLQTQGS 268 (353)
T ss_pred ccccccHHHHHhhhccccccceecCcHHHHHHHHhhcCC
Confidence 445667788999999999999999999999999999974
No 26
>KOG0759|consensus
Probab=98.34 E-value=5.1e-07 Score=60.41 Aligned_cols=55 Identities=16% Similarity=0.288 Sum_probs=47.2
Q ss_pred CCCCChhHHHHHHHHHHHHHhHhhhhccHHHHHHHHhhcccccccccccccccccc
Q psy3923 17 ALADPVAFAKDFIAGGVSAAVSKTAVAPIERVKLLLQVQHISKQISEEQRYKADFL 72 (73)
Q Consensus 17 ~~~~~~~~~~~~~aG~~aG~~~~~~~~P~d~vKtrlQ~q~~~~~~~~~~~y~g~~~ 72 (73)
....++++.....+|++||+++.++.+|.|++-+|||.+... ....++.|++.||
T Consensus 89 ~~~~~~~~~~k~~~g~~AGa~Gg~vGtPadv~~VRMQ~D~~L-P~~~RRNYknv~d 143 (286)
T KOG0759|consen 89 PDGKPLPLLGKALLGGIAGAIGGVVGTPADVANVRMQADGRL-PPEQRRNYKNVFD 143 (286)
T ss_pred cccCCccHHHHHHHHHHHHHhhhhcCCHHHHHHHHHhccCCC-CHHHhhhhhhHhh
Confidence 345678899999999999999999999999999999999865 2345678998887
No 27
>KOG0760|consensus
Probab=98.31 E-value=1.4e-06 Score=58.36 Aligned_cols=40 Identities=18% Similarity=0.306 Sum_probs=35.3
Q ss_pred CCCCChhHHHHHHHHHHHHHhHhhhhccHHHHHHHHhhcc
Q psy3923 17 ALADPVAFAKDFIAGGVSAAVSKTAVAPIERVKLLLQVQH 56 (73)
Q Consensus 17 ~~~~~~~~~~~~~aG~~aG~~~~~~~~P~d~vKtrlQ~q~ 56 (73)
......+.+.++.||+++|++...+.+|+|.||+|||.-.
T Consensus 9 ~lpt~~~~~~~l~AGa~aGi~EH~vMfPvDtvKTrmQsl~ 48 (302)
T KOG0760|consen 9 SLPTHSPVYQHLTAGAFAGILEHSVMFPVDTVKTRMQSLG 48 (302)
T ss_pred cCCCCCcHHHHHHHHHHHHHHHHhhccchhHHHHHHHhcC
Confidence 3444556899999999999999999999999999999876
No 28
>KOG0749|consensus
Probab=98.28 E-value=8.5e-07 Score=59.28 Aligned_cols=52 Identities=67% Similarity=0.903 Sum_probs=43.9
Q ss_pred CCChhHHHHHHHHHHHHHhHhhhhccHHHHHHHHhhcccccccccccccccccc
Q psy3923 19 ADPVAFAKDFIAGGVSAAVSKTAVAPIERVKLLLQVQHISKQISEEQRYKADFL 72 (73)
Q Consensus 19 ~~~~~~~~~~~aG~~aG~~~~~~~~P~d~vKtrlQ~q~~~~~~~~~~~y~g~~~ 72 (73)
....++...|++|+++..++.+++.|+|+||-.||+|.. +.....+|+|+.|
T Consensus 7 ~~~~~F~~Dfl~GgvaAavsKTavAPIERVKLlLQ~Q~~--~~~~~~~YkGi~D 58 (298)
T KOG0749|consen 7 DDAKSFAKDFLAGGVAAAVSKTAVAPIERVKLLLQVQDS--EIAADKRYKGIVD 58 (298)
T ss_pred hhHHHHHHHHHcchHHhhhhhhccccHHHHHHHHHhccc--hhhhccCccchhh
Confidence 335568889999999999999999999999999999985 3334558999887
No 29
>KOG0761|consensus
Probab=98.27 E-value=3.3e-07 Score=62.62 Aligned_cols=39 Identities=23% Similarity=0.376 Sum_probs=34.6
Q ss_pred CCChhHHHHHHHHHHHHHhHhhhhccHHHHHHHHhhccc
Q psy3923 19 ADPVAFAKDFIAGGVSAAVSKTAVAPIERVKLLLQVQHI 57 (73)
Q Consensus 19 ~~~~~~~~~~~aG~~aG~~~~~~~~P~d~vKtrlQ~q~~ 57 (73)
.....+..+|.+|+++|.+++++++|+||+|||-|++..
T Consensus 257 ~~~~~f~~sF~sG~iaGtvAAi~T~PfDV~KT~~QI~~~ 295 (361)
T KOG0761|consen 257 NSQSSFGASFVSGFIAGTVAAIATCPFDVVKTRRQIEGG 295 (361)
T ss_pred CcCCceeeeehhhhHHHHHHHHHcCCchhhhHHHHHhcC
Confidence 334477889999999999999999999999999999864
No 30
>KOG0759|consensus
Probab=98.27 E-value=1e-06 Score=58.98 Aligned_cols=36 Identities=17% Similarity=0.237 Sum_probs=33.1
Q ss_pred ChhHHHHHHHHHHHHHhHhhhhccHHHHHHHHhhcc
Q psy3923 21 PVAFAKDFIAGGVSAAVSKTAVAPIERVKLLLQVQH 56 (73)
Q Consensus 21 ~~~~~~~~~aG~~aG~~~~~~~~P~d~vKtrlQ~q~ 56 (73)
..++..+|+++.++|+++++++.|+|++|||+|+.+
T Consensus 194 ~d~~~tH~~aS~~aG~vatv~s~PlDv~KTr~mN~~ 229 (286)
T KOG0759|consen 194 DDGILTHFIASMIAGLVATVISQPLDVLKTRIMNMK 229 (286)
T ss_pred CCchHHHHHHHHHHHHHHHHhcChHHHHHHHHhhcC
Confidence 346778999999999999999999999999999887
No 31
>KOG0754|consensus
Probab=98.17 E-value=1.8e-06 Score=57.37 Aligned_cols=38 Identities=13% Similarity=0.243 Sum_probs=34.7
Q ss_pred CCCChhHHHHHHHHHHHHHhHhhhhccHHHHHHHHhhc
Q psy3923 18 LADPVAFAKDFIAGGVSAAVSKTAVAPIERVKLLLQVQ 55 (73)
Q Consensus 18 ~~~~~~~~~~~~aG~~aG~~~~~~~~P~d~vKtrlQ~q 55 (73)
.+....++..+++|+++|.+++++..|+|++|+|+|..
T Consensus 196 k~~~~~~~~~~i~g~l~gtla~~ln~pfDVaKsRIQgp 233 (294)
T KOG0754|consen 196 KDKTLEIRRKLIIGALAGTLACVLNTPFDVAKSRIQGP 233 (294)
T ss_pred cCcHHHHHHHHHHHHhhhhhhhhccChhHHhHhhccCC
Confidence 35578899999999999999999999999999999974
No 32
>KOG0036|consensus
Probab=98.14 E-value=3.2e-07 Score=64.27 Aligned_cols=40 Identities=43% Similarity=0.596 Sum_probs=36.3
Q ss_pred CCCChhHHHHHHHHHHHHHhHhhhhccHHHHHHHHhhccc
Q psy3923 18 LADPVAFAKDFIAGGVSAAVSKTAVAPIERVKLLLQVQHI 57 (73)
Q Consensus 18 ~~~~~~~~~~~~aG~~aG~~~~~~~~P~d~vKtrlQ~q~~ 57 (73)
...+..+|.+|+||++||+++.+++.|+|++|+-||++..
T Consensus 181 e~~~g~ww~~liAGGiAGavSRTcTAPlDRLKV~lqv~~~ 220 (463)
T KOG0036|consen 181 ENDSGRWWGFLIAGGIAGAVSRTCTAPLDRLKVFLQVQSP 220 (463)
T ss_pred HhcccchhhhhccccccccccccccCchhhhheeeeccCC
Confidence 3556778999999999999999999999999999999974
No 33
>KOG0769|consensus
Probab=98.13 E-value=1.5e-06 Score=58.33 Aligned_cols=33 Identities=24% Similarity=0.317 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHHHhHhhhhccHHHHHHHHhhcc
Q psy3923 24 FAKDFIAGGVSAAVSKTAVAPIERVKLLLQVQH 56 (73)
Q Consensus 24 ~~~~~~aG~~aG~~~~~~~~P~d~vKtrlQ~q~ 56 (73)
.+.+.++|+++|+++.+++||+|.+|+|+|.+.
T Consensus 3 sl~~A~sGAvGs~iA~t~~YPLDT~ksr~Q~e~ 35 (308)
T KOG0769|consen 3 SLVHALSGAVGSLIAMTIFYPLDTVKSRLQAEV 35 (308)
T ss_pred hHHHHhhhhHHHHHHHHhhcchHHHHHHHHHHH
Confidence 356788999999999999999999999999986
No 34
>KOG0766|consensus
Probab=98.13 E-value=1.4e-06 Score=57.39 Aligned_cols=32 Identities=19% Similarity=0.332 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHhHhhhhccHHHHHHHHhhcc
Q psy3923 25 AKDFIAGGVSAAVSKTAVAPIERVKLLLQVQH 56 (73)
Q Consensus 25 ~~~~~aG~~aG~~~~~~~~P~d~vKtrlQ~q~ 56 (73)
..++-+|.++|+.++++++|+|++|+|||+..
T Consensus 214 ivN~~sgi~sg~lAt~vT~Pfd~iKTrmQLeP 245 (297)
T KOG0766|consen 214 IVNFSSGIFSGILATLVTQPFDVIKTRMQLEP 245 (297)
T ss_pred eeehhHHHHHHHHHHHhcCchhhhhhhhccch
Confidence 66889999999999999999999999999876
No 35
>KOG0761|consensus
Probab=98.12 E-value=1.2e-06 Score=59.89 Aligned_cols=42 Identities=19% Similarity=0.296 Sum_probs=34.5
Q ss_pred CCCCChhHHHHHHHHHHHHHhHhhhhccHHHHHHHHhhcccc
Q psy3923 17 ALADPVAFAKDFIAGGVSAAVSKTAVAPIERVKLLLQVQHIS 58 (73)
Q Consensus 17 ~~~~~~~~~~~~~aG~~aG~~~~~~~~P~d~vKtrlQ~q~~~ 58 (73)
...+..++.+.+++.+.+.+++.+++.|+||||+|||.|...
T Consensus 13 ~~~~~~pl~e~~~Sa~~gAviTs~~vtPLDVVKtRLQaQ~~~ 54 (361)
T KOG0761|consen 13 LPENNLPLQERVLSACTGAVITSLIVTPLDVVKTRLQAQAAP 54 (361)
T ss_pred CCccCccHHHHhhhccccceeeeeecchHHHHHHHHHhccCC
Confidence 455666777777777888888999999999999999999743
No 36
>KOG0756|consensus
Probab=98.10 E-value=9.3e-07 Score=59.61 Aligned_cols=42 Identities=24% Similarity=0.248 Sum_probs=37.6
Q ss_pred CCCCChhHHHHHHHHHHHHHhHhhhhccHHHHHHHHhhcccc
Q psy3923 17 ALADPVAFAKDFIAGGVSAAVSKTAVAPIERVKLLLQVQHIS 58 (73)
Q Consensus 17 ~~~~~~~~~~~~~aG~~aG~~~~~~~~P~d~vKtrlQ~q~~~ 58 (73)
+...+++.+..++.|+++|.++.+.+.|+|+||+|||.+...
T Consensus 202 ~~~~~l~~~~~~~~gaiaGa~sv~~~~PiDvvktRMqsl~s~ 243 (299)
T KOG0756|consen 202 DDDKPLNPLSSGISGAIAGAASVFGTQPIDVVKTRMQSLKSD 243 (299)
T ss_pred CCccccCchhhhhhhhhccccccccCCCcHHHHHHhhhhhcc
Confidence 456678899999999999999999999999999999988654
No 37
>KOG0750|consensus
Probab=98.06 E-value=9e-07 Score=59.07 Aligned_cols=51 Identities=27% Similarity=0.453 Sum_probs=39.7
Q ss_pred CChhHHHHHHHHHHHHHhHhhhhccHHHHHHHHhhcccccccccccccccccc
Q psy3923 20 DPVAFAKDFIAGGVSAAVSKTAVAPIERVKLLLQVQHISKQISEEQRYKADFL 72 (73)
Q Consensus 20 ~~~~~~~~~~aG~~aG~~~~~~~~P~d~vKtrlQ~q~~~~~~~~~~~y~g~~~ 72 (73)
+..+....++.|+++|++...+++|+|+||+|+|+|... ..+...|+|+.|
T Consensus 4 q~~s~~akl~ngg~aGiigvscvfPvDlvktRLqnq~~~--~~g~~~yn~~~d 54 (304)
T KOG0750|consen 4 QKISLLAKLINGGIAGIIGVSCVFPIDLVKTRLQNQHGK--ITGKRQYNGVID 54 (304)
T ss_pred chhhhhhHHhcCcceeeeeEEEEeeHHHhHHHHhhcccC--cccccccchhhh
Confidence 456677789999999999999999999999999998643 123445655544
No 38
>KOG0755|consensus
Probab=97.94 E-value=3.1e-07 Score=61.04 Aligned_cols=59 Identities=19% Similarity=0.104 Sum_probs=48.4
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHhHhhhhccHHHHHHHHhhcccccccccccccccccc
Q psy3923 14 MAPALADPVAFAKDFIAGGVSAAVSKTAVAPIERVKLLLQVQHISKQISEEQRYKADFL 72 (73)
Q Consensus 14 ~~~~~~~~~~~~~~~~aG~~aG~~~~~~~~P~d~vKtrlQ~q~~~~~~~~~~~y~g~~~ 72 (73)
|-.++....++..+++.|+.+|+++..+..|+.+||||||.+......+....|+++||
T Consensus 117 w~~~dk~~~s~~~~v~~GA~~GvvGa~~~SPfFLvKTrlQs~s~qi~vG~Q~~~t~m~n 175 (320)
T KOG0755|consen 117 WFHNDKKENSLAINVFSGAGSGVVGAYFGSPFFLVKTRLQSYSKQIAVGYQHGYTSMFN 175 (320)
T ss_pred cccCCcccceeeeeeeeccccceeeeeecCceeeeeHhhHhhccccccchhhcccHHHH
Confidence 44456667778889999999999999999999999999999986545566677777765
No 39
>KOG0765|consensus
Probab=97.89 E-value=7.7e-06 Score=55.34 Aligned_cols=37 Identities=19% Similarity=0.316 Sum_probs=32.1
Q ss_pred hhHHHHHHHHHHHHHhHhhhhccHHHHHHHHhhcccc
Q psy3923 22 VAFAKDFIAGGVSAAVSKTAVAPIERVKLLLQVQHIS 58 (73)
Q Consensus 22 ~~~~~~~~aG~~aG~~~~~~~~P~d~vKtrlQ~q~~~ 58 (73)
.....+.++|.++|..+.++++|+|++|+|+|+....
T Consensus 244 ~~l~vQavsg~lag~tsti~TnPlD~irtRLQV~~~~ 280 (333)
T KOG0765|consen 244 SHLFVQAVSGALAGATSTILTNPLDTIRTRLQVHRGE 280 (333)
T ss_pred ceeeeeehhhhhhhhhHHHhcCcHHHHHHHHhhcccc
Confidence 3345578899999999999999999999999998754
No 40
>KOG0036|consensus
Probab=97.83 E-value=6.6e-06 Score=57.85 Aligned_cols=38 Identities=26% Similarity=0.545 Sum_probs=34.9
Q ss_pred CChhHHHHHHHHHHHHHhHhhhhccHHHHHHHHhhccc
Q psy3923 20 DPVAFAKDFIAGGVSAAVSKTAVAPIERVKLLLQVQHI 57 (73)
Q Consensus 20 ~~~~~~~~~~aG~~aG~~~~~~~~P~d~vKtrlQ~q~~ 57 (73)
..++....++||++||.++.+..||+|++|+|+|+...
T Consensus 278 e~ls~~~rl~AGglAGavAQ~~IYPmd~lKtRlq~~~~ 315 (463)
T KOG0036|consen 278 EDLSTFERLLAGGLAGAVAQTSIYPMDTLKTRLQCRPL 315 (463)
T ss_pred hhcchhhhhhccCchhHHHHhhcChHHHHHHHhhcccc
Confidence 67788889999999999999999999999999998753
No 41
>KOG0770|consensus
Probab=97.80 E-value=2.8e-05 Score=52.45 Aligned_cols=40 Identities=25% Similarity=0.179 Sum_probs=35.4
Q ss_pred CCChhHHHHHHHHHHHHHhHhhhhccHHHHHHHHhhcccc
Q psy3923 19 ADPVAFAKDFIAGGVSAAVSKTAVAPIERVKLLLQVQHIS 58 (73)
Q Consensus 19 ~~~~~~~~~~~aG~~aG~~~~~~~~P~d~vKtrlQ~q~~~ 58 (73)
..-...|.+|+||+++-.++.++--|.|++|+|||+|+..
T Consensus 122 ~~l~~t~~hl~AGfvGD~~~SfvYVPsEVlKtRlQlQGR~ 161 (353)
T KOG0770|consen 122 HPLAGTWAHLIAGFVGDTLGSFVYVPSEVLKTRLQLQGRN 161 (353)
T ss_pred CCCccHHHHHHHHHHHhhhcceEEeeHHHHHHHHhHhccc
Confidence 3456678899999999999999999999999999999864
No 42
>KOG0763|consensus
Probab=97.72 E-value=4.1e-06 Score=55.14 Aligned_cols=39 Identities=28% Similarity=0.423 Sum_probs=34.1
Q ss_pred CChhHHHHHHHHHHHHHhHhhhhccHHHHHHHHhhcccc
Q psy3923 20 DPVAFAKDFIAGGVSAAVSKTAVAPIERVKLLLQVQHIS 58 (73)
Q Consensus 20 ~~~~~~~~~~aG~~aG~~~~~~~~P~d~vKtrlQ~q~~~ 58 (73)
..+......++|+++|++-|+.++|.|+||+|+|+-+..
T Consensus 212 deiGpv~tmlaG~vgGicLWtsv~PaDviKSRiQV~~~~ 250 (301)
T KOG0763|consen 212 DEIGPVRTMLAGGVGGICLWTSVFPADVIKSRIQVLSMN 250 (301)
T ss_pred hhcccHHHHhhcccceeEEEeeeccHHHHhhHheecccc
Confidence 356667789999999999999999999999999988753
No 43
>KOG0769|consensus
Probab=97.70 E-value=5.1e-05 Score=51.07 Aligned_cols=39 Identities=13% Similarity=0.253 Sum_probs=34.7
Q ss_pred CCChhHHHHHHHHHHHHHhHhhhhccHHHHHHHHhhccc
Q psy3923 19 ADPVAFAKDFIAGGVSAAVSKTAVAPIERVKLLLQVQHI 57 (73)
Q Consensus 19 ~~~~~~~~~~~aG~~aG~~~~~~~~P~d~vKtrlQ~q~~ 57 (73)
+.+......++.|++||.+..++++|+|+|-+|||++..
T Consensus 97 s~s~~t~~~Lllga~AGsinvl~T~Plwvv~TRmqt~~~ 135 (308)
T KOG0769|consen 97 SQSSGTKADLLLGAAAGSINVLLTTPLWVVNTRMQTSEF 135 (308)
T ss_pred cCCcchHHHHHHHHHHhhhHHHhcChHHHHHHHHHHHhh
Confidence 355666789999999999999999999999999999874
No 44
>KOG0756|consensus
Probab=97.67 E-value=7e-06 Score=55.45 Aligned_cols=35 Identities=29% Similarity=0.430 Sum_probs=30.5
Q ss_pred hHHHHHHHHHHHHHhHhhhhccHHHHHHHHhhccc
Q psy3923 23 AFAKDFIAGGVSAAVSKTAVAPIERVKLLLQVQHI 57 (73)
Q Consensus 23 ~~~~~~~aG~~aG~~~~~~~~P~d~vKtrlQ~q~~ 57 (73)
....++++|+++|.+...+++|+|++|||||.+..
T Consensus 13 ~s~~~~~~Gg~~G~~E~c~~~P~E~vKT~LQldrr 47 (299)
T KOG0756|consen 13 GSASGIVAGGIAGGIEICITQPTEYVKTQLQLDRR 47 (299)
T ss_pred CchhhccccccccceeeeecCchhhhhheeehhhc
Confidence 34456799999999999999999999999999973
No 45
>KOG0766|consensus
Probab=97.61 E-value=3.3e-05 Score=50.98 Aligned_cols=35 Identities=20% Similarity=0.365 Sum_probs=31.3
Q ss_pred hHHHHHHHHHHHHHhHhhhhccHHHHHHHHhhccc
Q psy3923 23 AFAKDFIAGGVSAAVSKTAVAPIERVKLLLQVQHI 57 (73)
Q Consensus 23 ~~~~~~~aG~~aG~~~~~~~~P~d~vKtrlQ~q~~ 57 (73)
+...++++|.++|.++.+..+|+|++|+|+|....
T Consensus 13 ~~skhl~~G~~gG~~St~~lQPLDLLKTR~Qq~qr 47 (297)
T KOG0766|consen 13 PVSKHLLCGSIGGTCSTLLLQPLDLLKTRLQQLQR 47 (297)
T ss_pred ccHHHHhhcccccchhhhhcCcHHHHHHHHHHHHH
Confidence 45679999999999999999999999999997653
No 46
>KOG0768|consensus
Probab=97.58 E-value=0.00011 Score=50.27 Aligned_cols=38 Identities=24% Similarity=0.284 Sum_probs=33.5
Q ss_pred CChhHHHHHHHHHHHHHhHhhhhccHHHHHHHHhhccc
Q psy3923 20 DPVAFAKDFIAGGVSAAVSKTAVAPIERVKLLLQVQHI 57 (73)
Q Consensus 20 ~~~~~~~~~~aG~~aG~~~~~~~~P~d~vKtrlQ~q~~ 57 (73)
.......+.++|.++++++.++..|.|+||.|+|+...
T Consensus 132 ~~~~~~~h~~A~slg~i~a~~irvP~EvvKQR~Q~~~~ 169 (323)
T KOG0768|consen 132 DAFSVQVHMVAGSLGEIVACLIRVPTEVVKQRAQAGQF 169 (323)
T ss_pred cchhHHHHHHHHHHHHHHHHhhhchHHHHHHHHHhhcc
Confidence 34556679999999999999999999999999998765
No 47
>KOG0765|consensus
Probab=97.15 E-value=0.00015 Score=49.24 Aligned_cols=40 Identities=25% Similarity=0.196 Sum_probs=28.2
Q ss_pred CCChhHHHHHHHHHHHHHhHhhhhccHHHHHHHHhhcccc
Q psy3923 19 ADPVAFAKDFIAGGVSAAVSKTAVAPIERVKLLLQVQHIS 58 (73)
Q Consensus 19 ~~~~~~~~~~~aG~~aG~~~~~~~~P~d~vKtrlQ~q~~~ 58 (73)
+..++-...+..|+..-.--.++.||+-++|+|+|+|+..
T Consensus 28 We~lDK~kFy~~g~~l~~~Vr~aLYP~~vlkTrlQVq~~~ 67 (333)
T KOG0765|consen 28 WEMLDKKKFYPLGAALFSGVRTALYPLTVLKTRLQVQKKN 67 (333)
T ss_pred hhhccccceeehhhHHhhcceeeeeehhhhhhHHhhcccc
Confidence 3334444455666655555577889999999999999854
No 48
>KOG1519|consensus
Probab=96.85 E-value=0.0016 Score=42.65 Aligned_cols=34 Identities=38% Similarity=0.429 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHHhHhhhhccHHHHHHHHhhccc
Q psy3923 24 FAKDFIAGGVSAAVSKTAVAPIERVKLLLQVQHI 57 (73)
Q Consensus 24 ~~~~~~aG~~aG~~~~~~~~P~d~vKtrlQ~q~~ 57 (73)
....|+||++-|..-.++.+|+.+||+|||.|-.
T Consensus 211 Lv~DFiAG~LLGA~l~~~FFPi~VvKt~MQsqiG 244 (297)
T KOG1519|consen 211 LVNDFIAGGLLGAMLGFLFFPINVVKTRMQSQIG 244 (297)
T ss_pred HHHHHhhhhHHHHHHHHhhccHHHHHHHHHHHhC
Confidence 4457889999999989999999999999998853
No 49
>KOG0749|consensus
Probab=96.76 E-value=0.0023 Score=43.15 Aligned_cols=50 Identities=14% Similarity=0.153 Sum_probs=37.0
Q ss_pred CCCChhHHHHHHHHHHHHHhHhhhhccHHHHHHHHhhcccccccccccccccccc
Q psy3923 18 LADPVAFAKDFIAGGVSAAVSKTAVAPIERVKLLLQVQHISKQISEEQRYKADFL 72 (73)
Q Consensus 18 ~~~~~~~~~~~~aG~~aG~~~~~~~~P~d~vKtrlQ~q~~~~~~~~~~~y~g~~~ 72 (73)
+....+++..|+.+...-..+.++.+|+|.|+.||+..+. ....|+|.+|
T Consensus 207 d~k~~~f~~sf~iaq~vT~~ag~~sYP~DTVRRRmm~~~~-----~~~~Y~~Tld 256 (298)
T KOG0749|consen 207 DPKNGNFAASFAIAQVVTTGAGLLSYPLDTVRRRMMQSKG-----ADLKYTGTLD 256 (298)
T ss_pred CCccchHHHHHHHHHHHHHhcccccccchHHHHHHhhccC-----cccccCcHHH
Confidence 4455889999999988888899999999999999543321 3445665543
No 50
>KOG0763|consensus
Probab=96.58 E-value=0.0028 Score=42.01 Aligned_cols=39 Identities=26% Similarity=0.261 Sum_probs=33.9
Q ss_pred CCChhHHHHHHHHHHHHHhHhhhhccHHHHHHHHhhccc
Q psy3923 19 ADPVAFAKDFIAGGVSAAVSKTAVAPIERVKLLLQVQHI 57 (73)
Q Consensus 19 ~~~~~~~~~~~aG~~aG~~~~~~~~P~d~vKtrlQ~q~~ 57 (73)
...+.-.++..+|.+|.+++.++.+|.|+||.|+|...+
T Consensus 107 ~~~lt~lqnA~aGSlAa~Faal~LCPTELvKCkLQa~rE 145 (301)
T KOG0763|consen 107 QAKLTDLQNAAAGSLAAAFAALVLCPTELVKCKLQAMRE 145 (301)
T ss_pred hhhcchhHHHhhhhHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 345667889999999999999999999999999998653
No 51
>KOG2954|consensus
Probab=96.24 E-value=0.0063 Score=42.39 Aligned_cols=51 Identities=16% Similarity=0.130 Sum_probs=38.2
Q ss_pred hhHHHHHHHHHHHHHhHhhhhccHHHHHHHHhhcccccccc----------cccccccccc
Q psy3923 22 VAFAKDFIAGGVSAAVSKTAVAPIERVKLLLQVQHISKQIS----------EEQRYKADFL 72 (73)
Q Consensus 22 ~~~~~~~~aG~~aG~~~~~~~~P~d~vKtrlQ~q~~~~~~~----------~~~~y~g~~~ 72 (73)
..+...+.|+.+|-++..++.+|+|.|-.||++|+-...+. -..+|+|++|
T Consensus 274 e~~~p~~~A~~~aml~TdvilyPfETIlHRl~iQGTRTiIDNlDtGysvvpi~t~Y~G~fD 334 (427)
T KOG2954|consen 274 EDQNPQMYAQLIAMLTTDVILYPFETILHRLYIQGTRTIIDNLDTGYSVVPILTKYSGYFD 334 (427)
T ss_pred hhhCHHHHHHHHHHHhhhhhhccHHHHHHHHhccceeeeeeccCCcceeeEeeeccchHHH
Confidence 34455778888888899999999999999999998542211 1246888776
No 52
>KOG0767|consensus
Probab=95.71 E-value=0.0035 Score=42.56 Aligned_cols=36 Identities=22% Similarity=0.183 Sum_probs=31.3
Q ss_pred hHHHHHHHHHHHHHhHhhhhccHHHHHHHHhhcccc
Q psy3923 23 AFAKDFIAGGVSAAVSKTAVAPIERVKLLLQVQHIS 58 (73)
Q Consensus 23 ~~~~~~~aG~~aG~~~~~~~~P~d~vKtrlQ~q~~~ 58 (73)
..+..+.+++.|-+++.+..+|+|-+|+|+|+|...
T Consensus 134 rtsiYlaaSAsAEf~ADiaLcP~EA~KVRvQT~P~f 169 (333)
T KOG0767|consen 134 RTSIYLAASASAEFFADIALCPMEAVKVRVQTQPGF 169 (333)
T ss_pred hhhhhhhhhhHHHHHHHHHhCchhhheEEEeccCcc
Confidence 345678888999999999999999999999999753
No 53
>KOG0767|consensus
Probab=94.89 E-value=0.023 Score=38.75 Aligned_cols=40 Identities=15% Similarity=0.150 Sum_probs=33.6
Q ss_pred CCCChhHHHHHHHHHHHHHhHhhhhccHHHHHHHHhhccc
Q psy3923 18 LADPVAFAKDFIAGGVSAAVSKTAVAPIERVKLLLQVQHI 57 (73)
Q Consensus 18 ~~~~~~~~~~~~aG~~aG~~~~~~~~P~d~vKtrlQ~q~~ 57 (73)
-++.......|++|.+||++..++.+|.|++-..+..+..
T Consensus 230 csk~eql~Vtf~aGY~AGv~cAivShPADv~vSklN~~k~ 269 (333)
T KOG0767|consen 230 CSKAEQLGVTFAAGYIAGVFCAIVSHPADVVVSKLNQDKG 269 (333)
T ss_pred cChHhhhhhhhHhhHHhhHhhhhhcCchHHHHHHHhcccc
Confidence 3456667789999999999999999999999998866543
No 54
>PF12732 YtxH: YtxH-like protein; InterPro: IPR024623 This family of uncharacterised proteins is found in bacteria. Proteins in this family are typically between 100 and 143 amino acids in length. The N-terminal region is the most conserved.
Probab=81.72 E-value=1.7 Score=23.41 Aligned_cols=23 Identities=30% Similarity=0.479 Sum_probs=18.6
Q ss_pred HHHHHHHHHHHHHhHhhhhccHH
Q psy3923 24 FAKDFIAGGVSAAVSKTAVAPIE 46 (73)
Q Consensus 24 ~~~~~~aG~~aG~~~~~~~~P~d 46 (73)
|+..|++|+++|.+..++..|=-
T Consensus 1 F~~g~l~Ga~~Ga~~glL~aP~s 23 (74)
T PF12732_consen 1 FLLGFLAGAAAGAAAGLLFAPKS 23 (74)
T ss_pred CHHHHHHHHHHHHHHHHHhCCCC
Confidence 45678899999999999988843
No 55
>KOG1519|consensus
Probab=76.89 E-value=3 Score=27.55 Aligned_cols=35 Identities=23% Similarity=0.298 Sum_probs=24.3
Q ss_pred hhHHHHHHHHHHHHHhHhhhhccHHHHHHHHhhcc
Q psy3923 22 VAFAKDFIAGGVSAAVSKTAVAPIERVKLLLQVQH 56 (73)
Q Consensus 22 ~~~~~~~~aG~~aG~~~~~~~~P~d~vKtrlQ~q~ 56 (73)
..-..+.++|+.+++....++-|+.-|--|-|+-+
T Consensus 28 ~~e~~H~~~~~~a~~~nv~i~P~~~kVLfrqqly~ 62 (297)
T KOG1519|consen 28 VGEMKHYLCGCCAAFNNVAITPPIQKVLFRQQLYG 62 (297)
T ss_pred cchHHHHHHHHHHHhhhhhcChHHHHHHHHHHHhc
Confidence 34457899999999998888877654444444433
No 56
>KOG2745|consensus
Probab=76.38 E-value=4.7 Score=27.74 Aligned_cols=35 Identities=34% Similarity=0.415 Sum_probs=24.1
Q ss_pred CChhHHHHHHHHHHHHHhHhhhhccHHHHHHHHhhcccc
Q psy3923 20 DPVAFAKDFIAGGVSAAVSKTAVAPIERVKLLLQVQHIS 58 (73)
Q Consensus 20 ~~~~~~~~~~aG~~aG~~~~~~~~P~d~vKtrlQ~q~~~ 58 (73)
...+++..|+++ .--..+.+|++++|+-+|+-.+.
T Consensus 16 ~~~~~a~~~~l~----lg~saLs~Pl~y~K~LIQlGhEP 50 (321)
T KOG2745|consen 16 EDENFAKRFILR----LGLSALSHPLEYVKTLIQLGHEP 50 (321)
T ss_pred CchhHHHHHHHH----hhHHHhhchHHHHHHHHHhCCCC
Confidence 345555555443 33456889999999999987653
No 57
>KOG2745|consensus
Probab=67.47 E-value=3.5 Score=28.37 Aligned_cols=45 Identities=22% Similarity=0.292 Sum_probs=32.3
Q ss_pred hHHHHHHH---HHHHHHhHhhhhccHHHHHHHHhhccccccccccccccccc
Q psy3923 23 AFAKDFIA---GGVSAAVSKTAVAPIERVKLLLQVQHISKQISEEQRYKADF 71 (73)
Q Consensus 23 ~~~~~~~a---G~~aG~~~~~~~~P~d~vKtrlQ~q~~~~~~~~~~~y~g~~ 71 (73)
+|+..+-- -.+.-+.+.++++|+.++-.|...|= .+.+.+|.|+.
T Consensus 132 sF~~vik~t~rd~v~~~~~v~~ahPFhVi~~R~maQf----VGrEtkYtg~~ 179 (321)
T KOG2745|consen 132 SFKKVIKRTFRDSVIRVVAVVAAHPFHVISLRQMAQF----VGRETKYTGLV 179 (321)
T ss_pred HHHHHHHHhHHHHHHHHHHHhhcCceeeeeHHHHHHH----HcccchhhHHH
Confidence 35444444 56777788999999999999998885 33556776653
No 58
>COG4980 GvpP Gas vesicle protein [General function prediction only]
Probab=64.98 E-value=9.9 Score=22.64 Aligned_cols=26 Identities=23% Similarity=0.333 Sum_probs=21.2
Q ss_pred ChhHHHHHHHHHHHHHhHhhhhccHH
Q psy3923 21 PVAFAKDFIAGGVSAAVSKTAVAPIE 46 (73)
Q Consensus 21 ~~~~~~~~~aG~~aG~~~~~~~~P~d 46 (73)
...++...+.|++.|.++.++..|=-
T Consensus 4 ~~~~l~G~liGgiiGa~aaLL~AP~s 29 (115)
T COG4980 4 GKDFLFGILIGGIIGAAAALLFAPKS 29 (115)
T ss_pred cchHHHHHHHHHHHHHHHHHHhCCcc
Confidence 34677788899999999999999843
No 59
>PF13940 Ldr_toxin: Toxin Ldr, type I toxin-antitoxin system
Probab=64.79 E-value=10 Score=17.80 Aligned_cols=24 Identities=21% Similarity=0.235 Sum_probs=19.0
Q ss_pred hHHHHHHHHHHHHHhHhhhhccHH
Q psy3923 23 AFAKDFIAGGVSAAVSKTAVAPIE 46 (73)
Q Consensus 23 ~~~~~~~aG~~aG~~~~~~~~P~d 46 (73)
-+|..+.|-.++|+++.+++..++
T Consensus 9 ~~WhDLAAP~iagIi~s~iv~w~~ 32 (35)
T PF13940_consen 9 AFWHDLAAPIIAGIIASLIVGWLR 32 (35)
T ss_pred HHHHHhHhHHHHHHHHHHHHHHHH
Confidence 467788888999999888876554
No 60
>PF10399 UCR_Fe-S_N: Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal; InterPro: IPR019470 This entry represents the TAT-signal region found in the iron-sulphur subunit of Ubiquinol-cytochrome C reductase (also known as the cytochrome bc1 complex). This enzymex is an oligomeric membrane protein complex that is a component of respiratory and photosynthetic electron transfer chains. It couples the transfer of electrons from ubiquinol to cytochrome c with the generation of a protein gradient across the membrane []. This entry is associated with IPR017941 from INTERPRO, IPR004192 from INTERPRO and IPR015248 from INTERPRO. ; GO: 0008121 ubiquinol-cytochrome-c reductase activity, 0055114 oxidation-reduction process; PDB: 1ZRT_R 2QJY_R 2FYN_L 2QJK_O 2QJP_I 2YIU_F.
Probab=59.29 E-value=13 Score=18.11 Aligned_cols=18 Identities=22% Similarity=0.252 Sum_probs=9.1
Q ss_pred HHHHHHHHHhHhhhhccH
Q psy3923 28 FIAGGVSAAVSKTAVAPI 45 (73)
Q Consensus 28 ~~aG~~aG~~~~~~~~P~ 45 (73)
+..++++++-...+..|+
T Consensus 17 ~at~~~gavG~~~~a~Pf 34 (41)
T PF10399_consen 17 IATSAVGAVGAAAAAWPF 34 (41)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 344445544445555565
No 61
>PF04418 DUF543: Domain of unknown function (DUF543); InterPro: IPR007512 This family of short eukaryotic proteins has no known function. Most of the members of this family are only 80 amino acid residues long. However the Arabidopsis homologue is over 300 residues long. These proteins contain a conserved N-terminal cysteine and a conserved motif GXGXGXG in the carboxy terminal half that may be functionally important.
Probab=40.16 E-value=20 Score=19.68 Aligned_cols=17 Identities=12% Similarity=-0.269 Sum_probs=10.1
Q ss_pred HHHHHHHHHHHhHhhhh
Q psy3923 26 KDFIAGGVSAAVSKTAV 42 (73)
Q Consensus 26 ~~~~aG~~aG~~~~~~~ 42 (73)
.....|...|++..++.
T Consensus 31 ~k~~~G~~~G~~~s~l~ 47 (75)
T PF04418_consen 31 VKTGLGFGIGVVFSLLF 47 (75)
T ss_pred HHHhhhhhHHHHHHHHH
Confidence 34556677777665543
No 62
>KOG4085|consensus
Probab=36.53 E-value=1.1e+02 Score=19.24 Aligned_cols=51 Identities=12% Similarity=0.143 Sum_probs=29.6
Q ss_pred cCCCCCCCCCCCCCCChhHHHHHHH---H-------HHHHHhHhhhhccHHHHHHHHhhcc
Q psy3923 6 QKQEAPMPMAPALADPVAFAKDFIA---G-------GVSAAVSKTAVAPIERVKLLLQVQH 56 (73)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~a---G-------~~aG~~~~~~~~P~d~vKtrlQ~q~ 56 (73)
.+....+.+..++....++|.++++ | .+.|++..+..+|+.+|--.+|.-.
T Consensus 8 ~G~sa~~~~~~dp~~~~pWw~r~l~rl~gilgaf~~~~fGvf~~ITls~~c~vAgvlqm~a 68 (175)
T KOG4085|consen 8 PGASASSAPPADPEAGMPWWYRWLCRLSGILGAFSCAIFGVFNCITLSPLCIVAGVLQMMA 68 (175)
T ss_pred CCccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhHHhhhHHHHHHHHHHHHH
Confidence 3334444444555556777776643 2 2334455556678888887777654
No 63
>COG1963 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=34.67 E-value=48 Score=20.72 Aligned_cols=28 Identities=11% Similarity=0.065 Sum_probs=22.7
Q ss_pred HHHHHHHHHHhHhhhhccHHHHHHHHhh
Q psy3923 27 DFIAGGVSAAVSKTAVAPIERVKLLLQV 54 (73)
Q Consensus 27 ~~~aG~~aG~~~~~~~~P~d~vKtrlQ~ 54 (73)
-|++..+++..+.++-.|++++|+|.-.
T Consensus 12 ~llsal~a~~~AQvIKv~I~~~~~rk~~ 39 (153)
T COG1963 12 PLLSALVAILLAQVIKVLIELIRTRKLN 39 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 4567778888889999999999998653
No 64
>PF00473 CRF: Corticotropin-releasing factor family; InterPro: IPR000187 Corticotropin-releasing factor (CRF), urotensin-I, urocortin and sauvagine form a family of related neuropeptides in vertebrates. The family can be grouped into 2 separate paralogous lineages, with urotensin-I, urocortin and sauvagine in one group and CRF forming the other group. Urocortin and sauvagine appear to represent orthologues of fish urotensin-I in mammals and amphibians, respectively. The peptides have a variety of physiological effects on stress and anxiety, vasoregulation, thermoregulation, growth and metabolism, metamorphosis and reproduction in various species, and are all released as preprohormones []. CRF [] is a hormone found mainly in the paraventricular nucleus of the mammalian hypothalamus that regulates the release of corticotropin (ACTH) from the pituitary gland. From here, CRF is transported to the anterior pituitary, stimulating adrenocorticotropic hormone (ACTH) release via CRF type 1 receptors, thereby activating the hypothalamo-pituitary-adrenocortical axis (HPA) and thus glucocorticoid release. CRF is evolutionary related to a number of other active peptides. Urocortin acts in vitro to stimulate the secretion of adrenocorticotropic hormone. Urotensin is found in the teleost caudal neurosecretory system and may play a role in osmoregulation and as a corticotropin-releasing factor. Urotensin-I is released from the urophysis of fish, and produces ACTH and subsequent cortisol release in vivo. The nonhormonal portion of the prohormone is thought to be the urotensin binding protein (urophysin). Sauvagine (P01144 from SWISSPROT), isolated from frog skin, has a potent hypotensive and diuretic effect.; GO: 0005179 hormone activity, 0005576 extracellular region; PDB: 3EHU_C 3EHT_B 2RMF_A 3N96_G.
Probab=33.93 E-value=31 Score=16.64 Aligned_cols=16 Identities=6% Similarity=0.108 Sum_probs=13.1
Q ss_pred hhccHHHHHHHHhhcc
Q psy3923 41 AVAPIERVKLLLQVQH 56 (73)
Q Consensus 41 ~~~P~d~vKtrlQ~q~ 56 (73)
+..|+|+++.++....
T Consensus 6 Idl~~~vLR~~l~~~~ 21 (39)
T PF00473_consen 6 IDLTFHVLRQRLELER 21 (39)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHH
Confidence 6789999999987654
No 65
>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=33.24 E-value=72 Score=19.09 Aligned_cols=17 Identities=12% Similarity=0.122 Sum_probs=11.9
Q ss_pred HHHHHHHHHHHHhHhhh
Q psy3923 25 AKDFIAGGVSAAVSKTA 41 (73)
Q Consensus 25 ~~~~~aG~~aG~~~~~~ 41 (73)
...++.|.+||+++.++
T Consensus 66 i~~Ii~gv~aGvIg~Il 82 (122)
T PF01102_consen 66 IIGIIFGVMAGVIGIIL 82 (122)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred eeehhHHHHHHHHHHHH
Confidence 45666788888877554
No 66
>KOG1746|consensus
Probab=33.19 E-value=64 Score=19.11 Aligned_cols=12 Identities=42% Similarity=0.429 Sum_probs=8.4
Q ss_pred HHHHHhhccccc
Q psy3923 48 VKLLLQVQHISK 59 (73)
Q Consensus 48 vKtrlQ~q~~~~ 59 (73)
+--|||+.....
T Consensus 73 vclR~q~n~qn~ 84 (115)
T KOG1746|consen 73 VCLRIQVNQQNK 84 (115)
T ss_pred HHHHHHhccccc
Confidence 456999887653
No 67
>PF06946 Phage_holin_5: Phage holin; InterPro: IPR009708 This entry represents the Bacteriophage A118, holin protein. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This protein family represent one of a large number of mutually dissimilar families of phage holins. It is thought that the temporal precision of holin-mediated lysis may occur through the build-up of a holin oligomer which causes the lysis [].
Probab=29.32 E-value=64 Score=18.53 Aligned_cols=20 Identities=20% Similarity=0.142 Sum_probs=12.9
Q ss_pred hhHHHHHHHHHHHHHhHhhh
Q psy3923 22 VAFAKDFIAGGVSAAVSKTA 41 (73)
Q Consensus 22 ~~~~~~~~aG~~aG~~~~~~ 41 (73)
.+....+++|+++|..++-+
T Consensus 58 ~~l~~~~~aG~laGlAaTGL 77 (93)
T PF06946_consen 58 GNLALMAWAGGLAGLAATGL 77 (93)
T ss_pred ccHHHHHHHHHHhhhhhhhH
Confidence 45556677777777766544
No 68
>PF02830 V4R: V4R domain; InterPro: IPR004096 Central cellular functions such as metabolism, solute transport and signal transduction are regulated, in part, via binding of small molecules by specialised domains. The 4-vinyl reductase (4VR) domain is a predicted small molecular binding domain, that may bind to hydrocarbons []. Proteins that contain this domain include a regulator of the phenol catabolic pathway and a protein involved in chlorophyll biosynthesis.; PDB: 2OSD_A 2OSO_A.
Probab=27.66 E-value=57 Score=16.57 Aligned_cols=20 Identities=20% Similarity=0.031 Sum_probs=14.3
Q ss_pred HHHHHHHHHHHhHhhhhccH
Q psy3923 26 KDFIAGGVSAAVSKTAVAPI 45 (73)
Q Consensus 26 ~~~~aG~~aG~~~~~~~~P~ 45 (73)
=.+.+|.++|++..+.--++
T Consensus 22 C~~~~G~~~G~~~~~~~~~~ 41 (62)
T PF02830_consen 22 CWFTAGYLAGFFSALFGKEV 41 (62)
T ss_dssp -HHHHHHHHHHHHHHHSSEE
T ss_pred EHHHHHHHHHHHHHHhCCce
Confidence 36788999999887665543
No 69
>smart00039 CRF corticotropin-releasing factor.
Probab=24.65 E-value=64 Score=15.62 Aligned_cols=16 Identities=6% Similarity=0.152 Sum_probs=12.7
Q ss_pred hhccHHHHHHHHhhcc
Q psy3923 41 AVAPIERVKLLLQVQH 56 (73)
Q Consensus 41 ~~~P~d~vKtrlQ~q~ 56 (73)
+..|+|+++.++....
T Consensus 7 Idl~~~vLR~~l~~e~ 22 (40)
T smart00039 7 IDLTFDLLRQRLELEK 22 (40)
T ss_pred cccHHHHHHHHHHHHH
Confidence 6679999999886654
No 70
>PF09062 Endonuc_subdom: PI-PfuI Endonuclease subdomain; InterPro: IPR015147 Ribonucleotide reductase from Pyrococcus species has been shown to contain two inteins, PI-PfuI and PI-PfuII. The endonuclease domain from the PI-PfuI intein is composed of two subdomains, each of which assumes an alpha-beta-beta-alpha-beta-beta-alpha-alpha topology. The four stranded beta-sheet forms a saddle-shaped surface and assembles together through an interface made of alpha-helices. The presence of 14 basic residues on the surface of the beta-sheets suggests that this large groove may be involved in DNA binding []. This entry represents the endonuclease subdomain found towards the N terminus.; PDB: 1DQ3_A.
Probab=21.21 E-value=88 Score=17.69 Aligned_cols=14 Identities=14% Similarity=0.209 Sum_probs=9.0
Q ss_pred hHHHHHHHHHHHHH
Q psy3923 23 AFAKDFIAGGVSAA 36 (73)
Q Consensus 23 ~~~~~~~aG~~aG~ 36 (73)
-.+..++||.+||-
T Consensus 8 fifDYWLAGFIAGd 21 (98)
T PF09062_consen 8 FIFDYWLAGFIAGD 21 (98)
T ss_dssp --HHHHHHHHHHHH
T ss_pred hhHHHHHHHhhcCC
Confidence 34567788888874
Done!