BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3924
(131 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8NEZ4|MLL3_HUMAN Histone-lysine N-methyltransferase MLL3 OS=Homo sapiens GN=MLL3 PE=1
SV=3
Length = 4911
Score = 129 bits (324), Expect = 5e-30, Method: Composition-based stats.
Identities = 50/79 (63%), Positives = 60/79 (75%)
Query: 20 LPISKVILSKGWRCLDCTVCEGCAQRHDEGRLILCDECDISYHIYCTDPPLDHIPRGTWK 79
+ I+KV+LSKGWRCL+CTVCE C + D GRL+LCD+CDISYH YC DPPL +P+G WK
Sbjct: 991 IKITKVVLSKGWRCLECTVCEACGKATDPGRLLLCDDCDISYHTYCLDPPLQTVPKGGWK 1050
Query: 80 CKWCAQCLTCGATGYHIYC 98
CKWC C CGAT + C
Sbjct: 1051 CKWCVWCRHCGATSAGLRC 1069
Score = 78.2 bits (191), Expect = 1e-14, Method: Composition-based stats.
Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 9/94 (9%)
Query: 8 YGSVCRDVKLHDLPISKVILSKGWRCLDCTVCEGCAQRHDEGRLILCDECDISYHIYCTD 67
Y +C D+ + P+ + GW+C +C VC+ C Q ++ ++++CD CD YH +C
Sbjct: 366 YHGMCLDIAV--TPLKRA----GWQCPECKVCQNCKQSGEDSKMLVCDTCDKGYHTFCLQ 419
Query: 68 PPLDHIPRGTWKCKWCAQCLTCG---ATGYHIYC 98
P + +P WKCK C C+ CG ++ +H C
Sbjct: 420 PVMKSVPTNGWKCKNCRICIECGTRSSSQWHHNC 453
Score = 41.6 bits (96), Expect = 0.001, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 31/86 (36%), Gaps = 17/86 (19%)
Query: 35 DCTVCEGCAQRHDEGRLILCDECDISYHIYCTDPPLDHIPRGTWKCKWCAQCLTCGAT-- 92
+C VC+ D+ C C YH C D + + R W+C C C C +
Sbjct: 343 NCAVCDSPGDLLDQ---FFCTTCGQHYHGMCLDIAVTPLKRAGWQCPECKVCQNCKQSGE 399
Query: 93 ------------GYHIYCTDPPLDHI 106
GYH +C P + +
Sbjct: 400 DSKMLVCDTCDKGYHTFCLQPVMKSV 425
Score = 34.7 bits (78), Expect = 0.20, Method: Composition-based stats.
Identities = 24/98 (24%), Positives = 37/98 (37%), Gaps = 14/98 (14%)
Query: 21 PISKVILSKGWRCLDCTVCEGCAQRHDEGRLILCDECDISYH------IYCTDPPLDHIP 74
P+ K + + GW+C +C +C C R C CD Y +C +
Sbjct: 420 PVMKSVPTNGWKCKNCRICIECGTRSSSQWHHNCLICDNCYQQQDNLCPFCGKCYHPELQ 479
Query: 75 RGTWKCKWCAQCLTCGATGYHIYCTDPPLDHIIFVQDK 112
+ C C + + H+ C D P DH + Q K
Sbjct: 480 KDMLHCNMCKRWV-------HLEC-DKPTDHELDTQLK 509
>sp|Q8BRH4|MLL3_MOUSE Histone-lysine N-methyltransferase MLL3 OS=Mus musculus GN=Mll3 PE=2
SV=2
Length = 4903
Score = 128 bits (322), Expect = 8e-30, Method: Composition-based stats.
Identities = 50/79 (63%), Positives = 60/79 (75%)
Query: 20 LPISKVILSKGWRCLDCTVCEGCAQRHDEGRLILCDECDISYHIYCTDPPLDHIPRGTWK 79
+ I+KV+LSKGWRCL+CTVCE C + D GRL+LCD+CDISYH YC DPPL +P+G WK
Sbjct: 984 IKITKVVLSKGWRCLECTVCEACGKATDPGRLLLCDDCDISYHTYCLDPPLQTVPKGGWK 1043
Query: 80 CKWCAQCLTCGATGYHIYC 98
CKWC C CGAT + C
Sbjct: 1044 CKWCVWCRHCGATSAGLRC 1062
Score = 79.0 bits (193), Expect = 8e-15, Method: Composition-based stats.
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 9/94 (9%)
Query: 8 YGSVCRDVKLHDLPISKVILSKGWRCLDCTVCEGCAQRHDEGRLILCDECDISYHIYCTD 67
Y +C D+ + P+ + GW+C +C VC+ C Q ++ ++++CD CD YH +C
Sbjct: 365 YHGMCLDIAV--TPLKRA----GWQCPECKVCQNCKQSGEDSKMLVCDTCDKGYHTFCLQ 418
Query: 68 PPLDHIPRGTWKCKWCAQCLTCG---ATGYHIYC 98
P + +P WKCK C C+ CG +T +H C
Sbjct: 419 PVMKSVPTNGWKCKNCRICIECGTRSSTQWHHNC 452
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 31/86 (36%), Gaps = 17/86 (19%)
Query: 35 DCTVCEGCAQRHDEGRLILCDECDISYHIYCTDPPLDHIPRGTWKCKWCAQCLTCGAT-- 92
+C VC+ D+ C C YH C D + + R W+C C C C +
Sbjct: 342 NCAVCDSPGDLLDQ---FFCTTCGQHYHGMCLDIAVTPLKRAGWQCPECKVCQNCKQSGE 398
Query: 93 ------------GYHIYCTDPPLDHI 106
GYH +C P + +
Sbjct: 399 DSKMLVCDTCDKGYHTFCLQPVMKSV 424
Score = 29.6 bits (65), Expect = 5.5, Method: Composition-based stats.
Identities = 20/98 (20%), Positives = 36/98 (36%), Gaps = 35/98 (35%)
Query: 21 PISKVILSKGWRCLDCTVC------------------EGCAQRHD--------------E 48
P+ K + + GW+C +C +C + C Q+ D +
Sbjct: 419 PVMKSVPTNGWKCKNCRICIECGTRSSTQWHHNCLICDTCYQQQDNLCPFCGKCYHPELQ 478
Query: 49 GRLILCDECDISYHIYC---TDPPLDHIPRGTWKCKWC 83
++ C+ C H+ C TD LD + + C +C
Sbjct: 479 KDMLHCNMCKRWVHLECDKPTDQELDSQLKEDYICMYC 516
>sp|Q6PDK2|MLL2_MOUSE Histone-lysine N-methyltransferase MLL2 OS=Mus musculus GN=Mll2 PE=1
SV=2
Length = 5588
Score = 122 bits (306), Expect = 6e-28, Method: Composition-based stats.
Identities = 46/77 (59%), Positives = 56/77 (72%)
Query: 22 ISKVILSKGWRCLDCTVCEGCAQRHDEGRLILCDECDISYHIYCTDPPLDHIPRGTWKCK 81
I+KV+L KGWRC++C VCE C Q D RL+LCD+CDISYH YC DPPL +P+G WKCK
Sbjct: 1369 ITKVMLLKGWRCVECIVCEVCGQASDPSRLLLCDDCDISYHTYCLDPPLLTVPKGGWKCK 1428
Query: 82 WCAQCLTCGATGYHIYC 98
WC C+ CGA +C
Sbjct: 1429 WCVSCMQCGAASPGFHC 1445
Score = 77.4 bits (189), Expect = 2e-14, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 40/61 (65%)
Query: 31 WRCLDCTVCEGCAQRHDEGRLILCDECDISYHIYCTDPPLDHIPRGTWKCKWCAQCLTCG 90
W+C +C VC+ C + ++ ++++C+ CD YH +C PP++ +P +WKCK C C CG
Sbjct: 268 WQCPECKVCQSCRKPGNDSKMLVCETCDKGYHTFCLKPPMEDLPAHSWKCKTCRLCRACG 327
Query: 91 A 91
A
Sbjct: 328 A 328
Score = 54.3 bits (129), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/85 (31%), Positives = 35/85 (41%), Gaps = 17/85 (20%)
Query: 36 CTVCEGCAQRHDEGRLILCDECDISYHIYCTDPPLDHIPRGTWKCKWCAQCLTCGA---- 91
C VCEG Q D L+ C C YH C D L R +W+C C C +C
Sbjct: 229 CAVCEGPGQLCD---LLFCTSCGHHYHGACLDTALTARKRASWQCPECKVCQSCRKPGND 285
Query: 92 ----------TGYHIYCTDPPLDHI 106
GYH +C PP++ +
Sbjct: 286 SKMLVCETCDKGYHTFCLKPPMEDL 310
>sp|O14686|MLL2_HUMAN Histone-lysine N-methyltransferase MLL2 OS=Homo sapiens GN=MLL2 PE=1
SV=2
Length = 5537
Score = 122 bits (306), Expect = 6e-28, Method: Composition-based stats.
Identities = 46/77 (59%), Positives = 56/77 (72%)
Query: 22 ISKVILSKGWRCLDCTVCEGCAQRHDEGRLILCDECDISYHIYCTDPPLDHIPRGTWKCK 81
I+KV+L KGWRC++C VCE C Q D RL+LCD+CDISYH YC DPPL +P+G WKCK
Sbjct: 1413 ITKVMLLKGWRCVECIVCEVCGQASDPSRLLLCDDCDISYHTYCLDPPLLTVPKGGWKCK 1472
Query: 82 WCAQCLTCGATGYHIYC 98
WC C+ CGA +C
Sbjct: 1473 WCVSCMQCGAASPGFHC 1489
Score = 80.1 bits (196), Expect = 4e-15, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 41/62 (66%)
Query: 30 GWRCLDCTVCEGCAQRHDEGRLILCDECDISYHIYCTDPPLDHIPRGTWKCKWCAQCLTC 89
GW+C +C VC+ C + ++ ++++C+ CD YH +C PP++ +P +WKCK C C C
Sbjct: 267 GWQCPECKVCQACRKPGNDSKMLVCETCDKGYHTFCLKPPMEELPAHSWKCKACRVCRAC 326
Query: 90 GA 91
GA
Sbjct: 327 GA 328
Score = 50.8 bits (120), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/85 (30%), Positives = 32/85 (37%), Gaps = 17/85 (20%)
Query: 36 CTVCEGCAQRHDEGRLILCDECDISYHIYCTDPPLDHIPRGTWKCKWCAQCLTCGA---- 91
C VCEG + D L C C YH C D L R W+C C C C
Sbjct: 229 CAVCEGPGELCD---LFFCTSCGHHYHGACLDTALTARKRAGWQCPECKVCQACRKPGND 285
Query: 92 ----------TGYHIYCTDPPLDHI 106
GYH +C PP++ +
Sbjct: 286 SKMLVCETCDKGYHTFCLKPPMEEL 310
>sp|Q9VWF2|SAYP_DROME Supporter of activation of yellow protein OS=Drosophila melanogaster
GN=e(y)3 PE=2 SV=3
Length = 2006
Score = 67.0 bits (162), Expect = 3e-11, Method: Composition-based stats.
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Query: 19 DLPISKV--ILSKGWRCLDCTVCEGCAQRHDEGRLILCDECDISYHIYCTDPPLDHIPRG 76
D+P V + + W+C C C C G+++ C++CD YHIYC L +P G
Sbjct: 1729 DMPPRMVGRVRNYNWQCAGCKCCIKCRSSQRPGKMLYCEQCDRGYHIYCLG--LRTVPDG 1786
Query: 77 TWKCKWCAQCLTCGAT 92
W C+ C C+ CGAT
Sbjct: 1787 RWSCERCCFCMRCGAT 1802
Score = 34.7 bits (78), Expect = 0.16, Method: Composition-based stats.
Identities = 26/93 (27%), Positives = 32/93 (34%), Gaps = 24/93 (25%)
Query: 28 SKGWRCLDCTVCEGCAQRHDEGR-----LILCDECDISYHIYCTDPPLDHIPR---GTWK 79
S R C VC +H R I C C H C D P + R W+
Sbjct: 1687 SSSVRLSTCGVC--LRSQHRNARDMPEAFIRCYTCRKRVHPSCVDMPPRMVGRVRNYNWQ 1744
Query: 80 CKWCAQCLTCGAT--------------GYHIYC 98
C C C+ C ++ GYHIYC
Sbjct: 1745 CAGCKCCIKCRSSQRPGKMLYCEQCDRGYHIYC 1777
>sp|Q8WYB5|KAT6B_HUMAN Histone acetyltransferase KAT6B OS=Homo sapiens GN=KAT6B PE=1 SV=3
Length = 2073
Score = 65.5 bits (158), Expect = 1e-10, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 31 WRCLDCTVCEGC-AQRHDEGRLILCDECDISYHIYCTDPPLDHIPRGTWKCKWC 83
W+C++C C C Q + ++ CD CD +H+ C DPPL +P+G W C+ C
Sbjct: 264 WQCIECKTCSACRVQGRNADNMLFCDSCDRGFHMECCDPPLSRMPKGMWICQVC 317
Score = 38.1 bits (87), Expect = 0.017, Method: Composition-based stats.
Identities = 27/106 (25%), Positives = 43/106 (40%), Gaps = 24/106 (22%)
Query: 36 CTVCEGCAQRHDEGR---LILCDECDISYHIYCTD--PPLD-HIPRGTWKCKWCAQCLTC 89
C+ C G + + E + L+ C +C S H C P L ++ W+C C C C
Sbjct: 216 CSFCLGTKESNREKKPEELLSCADCGSSGHPSCLKFCPELTTNVKALRWQCIECKTCSAC 275
Query: 90 GATG---------------YHIYCTDPPLDHI---IFVQDKIRPKR 117
G +H+ C DPPL + +++ RPK+
Sbjct: 276 RVQGRNADNMLFCDSCDRGFHMECCDPPLSRMPKGMWICQVCRPKK 321
>sp|Q30DN6|KDM5D_CANFA Lysine-specific demethylase 5D OS=Canis familiaris GN=KDM5D PE=2
SV=1
Length = 1545
Score = 65.5 bits (158), Expect = 1e-10, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 37/55 (67%), Gaps = 2/55 (3%)
Query: 34 LDCTVCEGCAQRHDEGRLILCDECDISYHIYCTDPPLDHIPRGTWKCKWC--AQC 86
+D VC C++ ++ +L+LCD CD +YHI+C PPL IPRG W+C C A+C
Sbjct: 315 IDLYVCRICSRGDEDDKLLLCDGCDDTYHIFCLIPPLPEIPRGVWRCPKCIMAEC 369
>sp|Q8WML3|KAT6B_MACFA Histone acetyltransferase KAT6B OS=Macaca fascicularis GN=KAT6B
PE=2 SV=1
Length = 1784
Score = 65.1 bits (157), Expect = 1e-10, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 31 WRCLDCTVCEGC-AQRHDEGRLILCDECDISYHIYCTDPPLDHIPRGTWKCKWC 83
W+C++C C C Q + ++ CD CD +H+ C DPPL +P+G W C+ C
Sbjct: 264 WQCIECKTCSACRVQGRNADNMLFCDSCDRGFHMECCDPPLSRMPKGMWICQVC 317
Score = 37.7 bits (86), Expect = 0.023, Method: Composition-based stats.
Identities = 27/106 (25%), Positives = 43/106 (40%), Gaps = 24/106 (22%)
Query: 36 CTVCEGCAQRHDEGR---LILCDECDISYHIYCTD--PPLD-HIPRGTWKCKWCAQCLTC 89
C+ C G + + E + L+ C +C S H C P L ++ W+C C C C
Sbjct: 216 CSFCLGTKESNREKKPEELLSCADCGSSGHPSCLKFCPELTTNVKALRWQCIECKTCSAC 275
Query: 90 GATG---------------YHIYCTDPPLDHI---IFVQDKIRPKR 117
G +H+ C DPPL + +++ RPK+
Sbjct: 276 RVQGRNADNMLFCDSCDRGFHMECCDPPLSRMPKGMWICQVCRPKK 321
>sp|Q8BRB7|KAT6B_MOUSE Histone acetyltransferase KAT6B OS=Mus musculus GN=Kat6b PE=2 SV=3
Length = 1872
Score = 65.1 bits (157), Expect = 1e-10, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 31 WRCLDCTVCEGC-AQRHDEGRLILCDECDISYHIYCTDPPLDHIPRGTWKCKWC 83
W+C++C C C Q + ++ CD CD +H+ C DPPL +P+G W C+ C
Sbjct: 265 WQCIECKTCSACRVQGKNADNMLFCDSCDRGFHMECCDPPLSRMPKGMWICQVC 318
Score = 37.7 bits (86), Expect = 0.021, Method: Composition-based stats.
Identities = 27/106 (25%), Positives = 43/106 (40%), Gaps = 24/106 (22%)
Query: 36 CTVCEGCAQRHDEGR---LILCDECDISYHIYCTD--PPLD-HIPRGTWKCKWCAQCLTC 89
C+ C G + + E + L+ C +C S H C P L ++ W+C C C C
Sbjct: 217 CSFCLGTKESNREKKPEELLSCADCGSSGHPSCLKFCPELTANVKALRWQCIECKTCSAC 276
Query: 90 GATG---------------YHIYCTDPPLDHI---IFVQDKIRPKR 117
G +H+ C DPPL + +++ RPK+
Sbjct: 277 RVQGKNADNMLFCDSCDRGFHMECCDPPLSRMPKGMWICQVCRPKK 322
>sp|A9LMC0|DPF3_DANRE Zinc finger protein DPF3 OS=Danio rerio GN=dpf3 PE=2 SV=1
Length = 391
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%)
Query: 22 ISKVILSKGWRCLDCTVCEGCAQRHDEGRLILCDECDISYHIYCTDPPLDHIPRGTWKCK 81
+ + + + W+C++C C C ++ +L+ CD+CD YH+YC PP+ P G+W C
Sbjct: 316 MMQAVRTYQWQCIECKSCSLCGTSENDDQLLFCDDCDRGYHMYCLKPPMTQPPEGSWSCH 375
Query: 82 WCAQCLTCGATG 93
C L A+G
Sbjct: 376 LCQNLLKDKASG 387
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 17/70 (24%)
Query: 51 LILCDECDISYHIYC---TDPPLDHIPRGTWKCKWCAQCLTCGAT--------------G 93
L+ C +C S H C TD + + W+C C C CG + G
Sbjct: 295 LVSCSDCGRSGHPSCLQFTDNMMQAVRTYQWQCIECKSCSLCGTSENDDQLLFCDDCDRG 354
Query: 94 YHIYCTDPPL 103
YH+YC PP+
Sbjct: 355 YHMYCLKPPM 364
>sp|Q92794|KAT6A_HUMAN Histone acetyltransferase KAT6A OS=Homo sapiens GN=KAT6A PE=1 SV=2
Length = 2004
Score = 64.3 bits (155), Expect = 2e-10, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 31 WRCLDCTVCEGCA-QRHDEGRLILCDECDISYHIYCTDPPLDHIPRGTWKCKWC 83
W+C++C C C Q + ++ CD CD +H+ C DPPL +P+G W C+ C
Sbjct: 257 WQCIECKTCSSCRDQGKNADNMLFCDSCDRGFHMECCDPPLTRMPKGMWICQIC 310
Score = 37.7 bits (86), Expect = 0.019, Method: Composition-based stats.
Identities = 27/106 (25%), Positives = 44/106 (41%), Gaps = 24/106 (22%)
Query: 36 CTVCEGCAQRHDEGR---LILCDECDISYHIYCT--DPPLD-HIPRGTWKCKWCAQCLTC 89
C+ C G +++ E + LI C +C S H C P L + W+C C C +C
Sbjct: 209 CSFCLGTKEQNREKKPEELISCADCGNSGHPSCLKFSPELTVRVKALRWQCIECKTCSSC 268
Query: 90 GATG---------------YHIYCTDPPLDHI---IFVQDKIRPKR 117
G +H+ C DPPL + +++ RP++
Sbjct: 269 RDQGKNADNMLFCDSCDRGFHMECCDPPLTRMPKGMWICQICRPRK 314
>sp|P58270|DPF3_CHICK Zinc finger protein DPF3 OS=Gallus gallus GN=DPF3 PE=2 SV=1
Length = 427
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 43/73 (58%)
Query: 22 ISKVILSKGWRCLDCTVCEGCAQRHDEGRLILCDECDISYHIYCTDPPLDHIPRGTWKCK 81
+++ + + W+C++C C C ++ +L+ CD+CD YH+YC +PP+ P G+W C
Sbjct: 351 MTEAVKTYQWQCIECKSCSLCGTSENDDQLLFCDDCDRGYHMYCLNPPVFEPPEGSWSCH 410
Query: 82 WCAQCLTCGATGY 94
C + L A+ +
Sbjct: 411 LCRELLRERASAF 423
>sp|Q9BY66|KDM5D_HUMAN Lysine-specific demethylase 5D OS=Homo sapiens GN=KDM5D PE=1 SV=2
Length = 1539
Score = 64.3 bits (155), Expect = 2e-10, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 37/55 (67%), Gaps = 2/55 (3%)
Query: 34 LDCTVCEGCAQRHDEGRLILCDECDISYHIYCTDPPLDHIPRGTWKCKWC--AQC 86
+D +C+ C++ ++ +L+ CD CD +YHI+C PPL IPRG W+C C A+C
Sbjct: 312 IDSYICQVCSRGDEDDKLLFCDGCDDNYHIFCLLPPLPEIPRGIWRCPKCILAEC 366
>sp|Q5XUN4|KDM5D_PANTR Lysine-specific demethylase 5D OS=Pan troglodytes GN=KDM5D PE=2
SV=1
Length = 1535
Score = 64.3 bits (155), Expect = 2e-10, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 37/55 (67%), Gaps = 2/55 (3%)
Query: 34 LDCTVCEGCAQRHDEGRLILCDECDISYHIYCTDPPLDHIPRGTWKCKWC--AQC 86
+D +C+ C++ ++ +L+ CD CD +YHI+C PPL IPRG W+C C A+C
Sbjct: 312 IDSYICQVCSRGDEDDKLLFCDGCDDNYHIFCLLPPLPEIPRGIWRCPKCILAEC 366
>sp|Q9UGL1|KDM5B_HUMAN Lysine-specific demethylase 5B OS=Homo sapiens GN=KDM5B PE=1 SV=3
Length = 1544
Score = 63.9 bits (154), Expect = 2e-10, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 33/55 (60%)
Query: 29 KGWRCLDCTVCEGCAQRHDEGRLILCDECDISYHIYCTDPPLDHIPRGTWKCKWC 83
K +D VC C +DE RL+LCD CD SYH +C PPL +P+G W+C C
Sbjct: 302 KATNAVDLYVCLLCGSGNDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPKC 356
>sp|Q5F3R2|KDM5B_CHICK Lysine-specific demethylase 5B OS=Gallus gallus GN=KDM5B PE=2 SV=1
Length = 1522
Score = 63.9 bits (154), Expect = 3e-10, Method: Composition-based stats.
Identities = 25/50 (50%), Positives = 32/50 (64%)
Query: 34 LDCTVCEGCAQRHDEGRLILCDECDISYHIYCTDPPLDHIPRGTWKCKWC 83
+D VC C +DE RL+LCD CD SYH +C PPL +P+G W+C C
Sbjct: 282 VDLYVCLLCGSGNDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPQC 331
>sp|Q5TKR9|KAT6A_RAT Histone acetyltransferase KAT6A OS=Rattus norvegicus GN=Kat6a PE=2
SV=2
Length = 1998
Score = 63.9 bits (154), Expect = 3e-10, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 31 WRCLDCTVCEGCA-QRHDEGRLILCDECDISYHIYCTDPPLDHIPRGTWKCKWC 83
W+C++C C C Q + ++ CD CD +H+ C DPPL +P+G W C+ C
Sbjct: 257 WQCIECKTCSSCRDQGKNADNMLFCDSCDRGFHMECCDPPLTRMPKGMWICQIC 310
Score = 37.7 bits (86), Expect = 0.022, Method: Composition-based stats.
Identities = 28/106 (26%), Positives = 44/106 (41%), Gaps = 24/106 (22%)
Query: 36 CTVCEGCAQRHDEGR---LILCDECDISYHIYCT--DPPLDHIPRG-TWKCKWCAQCLTC 89
C+ C G +++ E + LI C +C S H C P L R W+C C C +C
Sbjct: 209 CSFCLGTKEQNREKKPEDLISCADCGNSGHPSCLKFSPELTVRVRALRWQCIECKTCSSC 268
Query: 90 GATG---------------YHIYCTDPPLDHI---IFVQDKIRPKR 117
G +H+ C DPPL + +++ RP++
Sbjct: 269 RDQGKNADNMLFCDSCDRGFHMECCDPPLTRMPKGMWICQICRPRK 314
>sp|Q8BZ21|KAT6A_MOUSE Histone acetyltransferase KAT6A OS=Mus musculus GN=Kat6a PE=1 SV=2
Length = 2003
Score = 63.9 bits (154), Expect = 3e-10, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 31 WRCLDCTVCEGCA-QRHDEGRLILCDECDISYHIYCTDPPLDHIPRGTWKCKWC 83
W+C++C C C Q + ++ CD CD +H+ C DPPL +P+G W C+ C
Sbjct: 257 WQCIECKTCSSCRDQGKNADNMLFCDSCDRGFHMECCDPPLTRMPKGMWICQIC 310
Score = 36.2 bits (82), Expect = 0.060, Method: Composition-based stats.
Identities = 26/106 (24%), Positives = 44/106 (41%), Gaps = 24/106 (22%)
Query: 36 CTVCEGCAQRHDEGR---LILCDECDISYHIYCT--DPPLD-HIPRGTWKCKWCAQCLTC 89
C+ C G +++ E + L+ C +C S H C P L + W+C C C +C
Sbjct: 209 CSFCLGTKEQNREKQPEELVSCADCGNSGHPSCLKFSPELTVRVKALRWQCIECKTCSSC 268
Query: 90 GATG---------------YHIYCTDPPLDHI---IFVQDKIRPKR 117
G +H+ C DPPL + +++ RP++
Sbjct: 269 RDQGKNADNMLFCDSCDRGFHMECCDPPLTRMPKGMWICQICRPRK 314
>sp|Q6IQX0|KD5BB_DANRE Lysine-specific demethylase 5B-B OS=Danio rerio GN=kdm5bb PE=2 SV=2
Length = 1503
Score = 63.9 bits (154), Expect = 3e-10, Method: Composition-based stats.
Identities = 25/50 (50%), Positives = 33/50 (66%)
Query: 34 LDCTVCEGCAQRHDEGRLILCDECDISYHIYCTDPPLDHIPRGTWKCKWC 83
+D VC C + +DE RL+LCD CD SYH +C PPL +P+G W+C C
Sbjct: 293 VDLYVCLVCGKGNDEDRLLLCDGCDDSYHTFCLIPPLTDVPKGDWRCPKC 342
Score = 33.9 bits (76), Expect = 0.29, Method: Composition-based stats.
Identities = 23/92 (25%), Positives = 37/92 (40%), Gaps = 13/92 (14%)
Query: 35 DCTVCEGCA-QRHDEGRLILCDECDISYHIYCTDPPLDHIPRGTWKCKWCAQCLTCGATG 93
DC + C Q+ G ++ C+ C ++H C P D + W C C
Sbjct: 1164 DCASLKVCVCQKPAMGAMLQCELCRDAFHSVCVRGPSDPLDPEAWLCPLC---------- 1213
Query: 94 YHIYCTDPPLDHIIFVQDKIRPKRLTTYKADA 125
+ T PPLD I + ++ R+ + DA
Sbjct: 1214 --LRSTKPPLDKIRSLLSSLQRIRVRLPEGDA 1243
>sp|Q80Y84|KDM5B_MOUSE Lysine-specific demethylase 5B OS=Mus musculus GN=Kdm5b PE=1 SV=1
Length = 1544
Score = 63.5 bits (153), Expect = 3e-10, Method: Composition-based stats.
Identities = 25/50 (50%), Positives = 32/50 (64%)
Query: 34 LDCTVCEGCAQRHDEGRLILCDECDISYHIYCTDPPLDHIPRGTWKCKWC 83
+D VC C +DE RL+LCD CD SYH +C PPL +P+G W+C C
Sbjct: 307 VDLYVCLLCGSGNDEDRLLLCDGCDDSYHTFCLVPPLHDVPKGDWRCPKC 356
>sp|Q9QX66|DPF1_MOUSE Zinc finger protein neuro-d4 OS=Mus musculus GN=Dpf1 PE=1 SV=2
Length = 387
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 41/73 (56%)
Query: 22 ISKVILSKGWRCLDCTVCEGCAQRHDEGRLILCDECDISYHIYCTDPPLDHIPRGTWKCK 81
++ + + W+C++C C C ++ +L+ CD+CD YH+YC PP+ P G+W C
Sbjct: 311 MTAAVRTYRWQCIECKSCSLCGTSENDDQLLFCDDCDRGYHMYCLSPPMAEPPEGSWSCH 370
Query: 82 WCAQCLTCGATGY 94
C + L A+ Y
Sbjct: 371 LCLRHLKEKASAY 383
>sp|P58267|DPF1_CHICK Zinc finger protein neuro-d4 OS=Gallus gallus GN=DPF1 PE=2 SV=1
Length = 380
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 40/75 (53%)
Query: 20 LPISKVILSKGWRCLDCTVCEGCAQRHDEGRLILCDECDISYHIYCTDPPLDHIPRGTWK 79
L ++ S W+C++C C C ++ +L+ CD+CD YH+YC PP+ P GTW
Sbjct: 302 LAMAAAARSYRWQCIECKNCSLCGSAENDEQLLFCDDCDRGYHMYCISPPVAEPPEGTWS 361
Query: 80 CKWCAQCLTCGATGY 94
C C + L A +
Sbjct: 362 CHLCLRQLKDKAAAF 376
>sp|P58269|DPF3_MOUSE Zinc finger protein DPF3 OS=Mus musculus GN=Dpf3 PE=1 SV=2
Length = 378
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 44/75 (58%)
Query: 20 LPISKVILSKGWRCLDCTVCEGCAQRHDEGRLILCDECDISYHIYCTDPPLDHIPRGTWK 79
L +++ + + W+C++C C C ++ +L+ CD+CD YH+YC +PP+ P G+W
Sbjct: 300 LNMTEAVKTYKWQCIECKSCILCGTSENDDQLLFCDDCDRGYHMYCLNPPVAEPPEGSWS 359
Query: 80 CKWCAQCLTCGATGY 94
C C + L A+ +
Sbjct: 360 CHLCWELLKEKASAF 374
>sp|Q92784|DPF3_HUMAN Zinc finger protein DPF3 OS=Homo sapiens GN=DPF3 PE=1 SV=3
Length = 378
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 44/75 (58%)
Query: 20 LPISKVILSKGWRCLDCTVCEGCAQRHDEGRLILCDECDISYHIYCTDPPLDHIPRGTWK 79
L +++ + + W+C++C C C ++ +L+ CD+CD YH+YC +PP+ P G+W
Sbjct: 300 LNMTEAVKTYKWQCIECKSCILCGTSENDDQLLFCDDCDRGYHMYCLNPPVAEPPEGSWS 359
Query: 80 CKWCAQCLTCGATGY 94
C C + L A+ +
Sbjct: 360 CHLCWELLKEKASAF 374
>sp|P41230|KDM5C_MOUSE Lysine-specific demethylase 5C OS=Mus musculus GN=Kdm5c PE=2 SV=4
Length = 1554
Score = 63.2 bits (152), Expect = 5e-10, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 37/55 (67%), Gaps = 2/55 (3%)
Query: 34 LDCTVCEGCAQRHDEGRLILCDECDISYHIYCTDPPLDHIPRGTWKCKWC--AQC 86
++ VC C++ ++ +L+LCD CD +YHI+C PPL IP+G W+C C A+C
Sbjct: 322 IESYVCRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLPEIPKGVWRCPKCVMAEC 376
>sp|P41229|KDM5C_HUMAN Lysine-specific demethylase 5C OS=Homo sapiens GN=KDM5C PE=1 SV=2
Length = 1560
Score = 63.2 bits (152), Expect = 5e-10, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 37/55 (67%), Gaps = 2/55 (3%)
Query: 34 LDCTVCEGCAQRHDEGRLILCDECDISYHIYCTDPPLDHIPRGTWKCKWC--AQC 86
++ VC C++ ++ +L+LCD CD +YHI+C PPL IP+G W+C C A+C
Sbjct: 322 IESYVCRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLPEIPKGVWRCPKCVMAEC 376
>sp|A1YVX4|KDM5C_PIG Lysine-specific demethylase 5C OS=Sus scrofa GN=KDM5C PE=2 SV=1
Length = 1516
Score = 62.8 bits (151), Expect = 6e-10, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 37/55 (67%), Gaps = 2/55 (3%)
Query: 34 LDCTVCEGCAQRHDEGRLILCDECDISYHIYCTDPPLDHIPRGTWKCKWC--AQC 86
++ VC C++ ++ +L+LCD CD +YHI+C PPL IP+G W+C C A+C
Sbjct: 281 IESYVCRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLPEIPKGVWRCPKCVMAEC 335
>sp|Q38JA7|KDM5C_CANFA Lysine-specific demethylase 5C OS=Canis familiaris GN=KDM5C PE=2
SV=1
Length = 1556
Score = 62.8 bits (151), Expect = 6e-10, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 37/55 (67%), Gaps = 2/55 (3%)
Query: 34 LDCTVCEGCAQRHDEGRLILCDECDISYHIYCTDPPLDHIPRGTWKCKWC--AQC 86
++ VC C++ ++ +L+LCD CD +YHI+C PPL IP+G W+C C A+C
Sbjct: 322 IESYVCRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLPEIPKGVWRCPKCVMAEC 376
>sp|Q9P1Y6|PHRF1_HUMAN PHD and RING finger domain-containing protein 1 OS=Homo sapiens
GN=PHRF1 PE=1 SV=3
Length = 1649
Score = 62.8 bits (151), Expect = 6e-10, Method: Composition-based stats.
Identities = 25/50 (50%), Positives = 29/50 (58%)
Query: 35 DCTVCEGCAQRHDEGRLILCDECDISYHIYCTDPPLDHIPRGTWKCKWCA 84
D T CE C + E RL+LCD CD YH+ C DPPL +P W C CA
Sbjct: 182 DPTFCEVCGRSDREDRLLLCDGCDAGYHMECLDPPLQEVPVDEWFCPECA 231
>sp|P29375|KDM5A_HUMAN Lysine-specific demethylase 5A OS=Homo sapiens GN=KDM5A PE=1 SV=3
Length = 1690
Score = 62.4 bits (150), Expect = 7e-10, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 33/50 (66%)
Query: 34 LDCTVCEGCAQRHDEGRLILCDECDISYHIYCTDPPLDHIPRGTWKCKWC 83
+D VC C + ++E +L+LCD CD SYH +C PPL +P+G W+C C
Sbjct: 291 VDLYVCMFCGRGNNEDKLLLCDGCDDSYHTFCLIPPLPDVPKGDWRCPKC 340
>sp|Q3UXZ9|KDM5A_MOUSE Lysine-specific demethylase 5A OS=Mus musculus GN=Kdm5a PE=1 SV=2
Length = 1690
Score = 62.4 bits (150), Expect = 8e-10, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 33/50 (66%)
Query: 34 LDCTVCEGCAQRHDEGRLILCDECDISYHIYCTDPPLDHIPRGTWKCKWC 83
+D VC C + ++E +L+LCD CD SYH +C PPL +P+G W+C C
Sbjct: 291 VDLYVCMFCGRGNNEDKLLLCDGCDDSYHTFCLLPPLPDVPKGDWRCPKC 340
>sp|P58268|REQU_CHICK Zinc finger protein ubi-d4 OS=Gallus gallus GN=REQ PE=2 SV=1
Length = 405
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 36/65 (55%)
Query: 31 WRCLDCTVCEGCAQRHDEGRLILCDECDISYHIYCTDPPLDHIPRGTWKCKWCAQCLTCG 90
W+C++C C C ++ +L+ CD+CD YH+YC PP+ P G+W C C L
Sbjct: 336 WQCIECKCCNICGTSENDDQLLFCDDCDRGYHMYCLTPPMSEPPEGSWSCHLCLDLLKEK 395
Query: 91 ATGYH 95
A+ Y
Sbjct: 396 ASIYQ 400
>sp|O97159|CHDM_DROME Chromodomain-helicase-DNA-binding protein Mi-2 homolog
OS=Drosophila melanogaster GN=Mi-2 PE=1 SV=2
Length = 1982
Score = 62.0 bits (149), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 38/95 (40%), Gaps = 30/95 (31%)
Query: 39 CEGCAQRHDEGRLILCDECDISYHIYCTDPPLDHIPRGTWKCKWCAQ------------- 85
CE C Q G +ILCD C +YH+ C +P LD P G W C C
Sbjct: 380 CEVCQQ---GGEIILCDTCPRAYHLVCLEPELDEPPEGKWSCPHCEADGGAAEEEDDDEH 436
Query: 86 ---CLTCGATG-----------YHIYCTDPPLDHI 106
C C G YH +C +PPLD I
Sbjct: 437 QEFCRVCKDGGELLCCDSCPSAYHTFCLNPPLDTI 471
Score = 60.8 bits (146), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/97 (34%), Positives = 42/97 (43%), Gaps = 21/97 (21%)
Query: 3 CDVI--AYGSVCRDVKLHDLPISKVILSKGWRCLDCTVC-------------EGCAQRHD 47
CD AY VC + +L + P K W C C E C D
Sbjct: 392 CDTCPRAYHLVCLEPELDEPPEGK------WSCPHCEADGGAAEEEDDDEHQEFCRVCKD 445
Query: 48 EGRLILCDECDISYHIYCTDPPLDHIPRGTWKCKWCA 84
G L+ CD C +YH +C +PPLD IP G W+C C+
Sbjct: 446 GGELLCCDSCPSAYHTFCLNPPLDTIPDGDWRCPRCS 482
>sp|Q09477|YP99_CAEEL Uncharacterized zinc finger protein C28H8.9 OS=Caenorhabditis
elegans GN=C28H8.9/C28H8.10 PE=1 SV=2
Length = 372
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 37/62 (59%)
Query: 22 ISKVILSKGWRCLDCTVCEGCAQRHDEGRLILCDECDISYHIYCTDPPLDHIPRGTWKCK 81
++K+I GW+CL+C C C ++ +L+ CD+CD YH+YC P L+ P + C+
Sbjct: 297 VTKIIKRSGWQCLECKSCTICGTSENDDKLLFCDDCDRGYHLYCLTPALEKAPDDEYSCR 356
Query: 82 WC 83
C
Sbjct: 357 LC 358
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 43/113 (38%), Gaps = 25/113 (22%)
Query: 17 LHDL----PISKVILSKGWRCLDCTVCEGCAQRHDEGRL----ILCDECDISYHIYCTDP 68
LHD P+ K++ C C G A + +L + C +C S H C +
Sbjct: 234 LHDQKSSQPLVKLLSPSIEISTSCDFCSGTAFMNKNTKLPEDLVSCHDCGRSGHPSCLNF 293
Query: 69 PLDH---IPRGTWKCKWCAQCLTCGAT--------------GYHIYCTDPPLD 104
+ I R W+C C C CG + GYH+YC P L+
Sbjct: 294 NQNVTKIIKRSGWQCLECKSCTICGTSENDDKLLFCDDCDRGYHLYCLTPALE 346
>sp|A6H619|PHRF1_MOUSE PHD and RING finger domain-containing protein 1 OS=Mus musculus
GN=Phrf1 PE=1 SV=2
Length = 1682
Score = 61.2 bits (147), Expect = 2e-09, Method: Composition-based stats.
Identities = 24/49 (48%), Positives = 28/49 (57%)
Query: 35 DCTVCEGCAQRHDEGRLILCDECDISYHIYCTDPPLDHIPRGTWKCKWC 83
D T CE C + E RL+LCD CD YH+ C DPPL +P W C C
Sbjct: 184 DPTFCEVCGRSDREDRLLLCDGCDAGYHMECLDPPLQEVPVDEWFCPEC 232
>sp|Q63625|PHRF1_RAT PHD and RING finger domain-containing protein 1 OS=Rattus
norvegicus GN=Phrf1 PE=1 SV=2
Length = 1685
Score = 60.8 bits (146), Expect = 2e-09, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 28/48 (58%)
Query: 37 TVCEGCAQRHDEGRLILCDECDISYHIYCTDPPLDHIPRGTWKCKWCA 84
T CE C + E RL+LCD CD YH+ C DPPL +P W C CA
Sbjct: 189 TFCEVCGRSDREDRLLLCDGCDAGYHMECLDPPLQEVPVDEWFCPECA 236
>sp|Q9W636|REQUB_XENLA Zinc finger protein ubi-d4 B (Fragment) OS=Xenopus laevis GN=req-b
PE=2 SV=2
Length = 366
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 36/65 (55%)
Query: 31 WRCLDCTVCEGCAQRHDEGRLILCDECDISYHIYCTDPPLDHIPRGTWKCKWCAQCLTCG 90
W+C++C C C ++ +L+ CD+CD YH+YC PP+ P G+W C C L
Sbjct: 299 WQCIECKCCNICGTSENDDQLLFCDDCDRGYHMYCLSPPVAEPPEGSWSCHLCLDLLKDK 358
Query: 91 ATGYH 95
A+ Y
Sbjct: 359 ASIYQ 363
>sp|Q22516|CHD3_CAEEL Chromodomain-helicase-DNA-binding protein 3 homolog
OS=Caenorhabditis elegans GN=chd-3 PE=2 SV=2
Length = 1787
Score = 60.1 bits (144), Expect = 4e-09, Method: Composition-based stats.
Identities = 31/99 (31%), Positives = 40/99 (40%), Gaps = 35/99 (35%)
Query: 39 CEGCAQRHDEGRLILCDECDISYHIYCTDPPLDHIPRGTWKCKWCAQ------------- 85
CE C Q +G L+LCD C +YH+ C D ++ P G W C C +
Sbjct: 268 CEVCNQ---DGELMLCDTCTRAYHVACIDENMEQPPEGDWSCPHCEEHGPDVLIVEEEPA 324
Query: 86 ------------------CLTCGATGYHIYCTDPPLDHI 106
C TC ++ YH YC DPPL I
Sbjct: 325 KANMDYCRICKETSNILLCDTCPSS-YHAYCIDPPLTEI 362
Score = 56.2 bits (134), Expect = 5e-08, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 26/48 (54%), Gaps = 6/48 (12%)
Query: 36 CTVCEGCAQRHDEGRLILCDECDISYHIYCTDPPLDHIPRGTWKCKWC 83
C +C+ + ++LCD C SYH YC DPPL IP G W C C
Sbjct: 331 CRICK------ETSNILLCDTCPSSYHAYCIDPPLTEIPEGEWSCPRC 372
>sp|P47156|JHD2_YEAST Histone demethylase JHD2 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=JHD2 PE=1 SV=1
Length = 728
Score = 59.7 bits (143), Expect = 5e-09, Method: Composition-based stats.
Identities = 23/49 (46%), Positives = 28/49 (57%)
Query: 35 DCTVCEGCAQRHDEGRLILCDECDISYHIYCTDPPLDHIPRGTWKCKWC 83
D C C + +D R ILCD CD +HIYC PPL+ +P G W C C
Sbjct: 234 DDDACIVCRKTNDPKRTILCDSCDKPFHIYCLSPPLERVPSGDWICNTC 282
>sp|Q6NWE1|PHF10_DANRE PHD finger protein 10 OS=Danio rerio GN=phf10 PE=2 SV=2
Length = 490
Score = 59.7 bits (143), Expect = 5e-09, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 31 WRCLDCTVCEGCAQRHDEGRLILCDECDISYHIYCTDPPLDHIPRGTWKCKWCAQ 85
W+C++C C C Q H E ++ CD+CD +H +C +D IP G W C C++
Sbjct: 420 WQCMECKTCTVCQQPHHEEEMMFCDKCDRGFHTFCVG--MDSIPMGCWVCDLCSK 472
Score = 33.1 bits (74), Expect = 0.51, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 6/60 (10%)
Query: 36 CTVCEGCAQRHDEGR---LILCDECDISYHIYCTDPPLDHIPR---GTWKCKWCAQCLTC 89
C +C+ + + G+ LI C +C S H C D +D + + W+C C C C
Sbjct: 372 CGICQKGKEANKRGKPEALIHCSQCQNSGHPSCLDMSVDLVAKIKMYPWQCMECKTCTVC 431
>sp|Q9SGH2|MBD9_ARATH Methyl-CpG-binding domain-containing protein 9 OS=Arabidopsis
thaliana GN=MBD9 PE=2 SV=1
Length = 2176
Score = 59.7 bits (143), Expect = 6e-09, Method: Composition-based stats.
Identities = 23/49 (46%), Positives = 28/49 (57%)
Query: 35 DCTVCEGCAQRHDEGRLILCDECDISYHIYCTDPPLDHIPRGTWKCKWC 83
D VC+ C D+ ++LCD CD YH YC +PPL IP G W C C
Sbjct: 1286 DEGVCKVCGVDKDDDSVLLCDTCDAEYHTYCLNPPLIRIPDGNWYCPSC 1334
Score = 35.0 bits (79), Expect = 0.14, Method: Composition-based stats.
Identities = 11/45 (24%), Positives = 21/45 (46%)
Query: 39 CEGCAQRHDEGRLILCDECDISYHIYCTDPPLDHIPRGTWKCKWC 83
C C + +++CD C+ +H+ C + ++ P W C C
Sbjct: 86 CGACGRPESIELVVVCDACERGFHMSCVNDGVEAAPSADWMCSDC 130
Score = 30.8 bits (68), Expect = 2.8, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 31/75 (41%), Gaps = 13/75 (17%)
Query: 44 QRHDEGRLILCDECDISYHIYCTDPPLDHIPRGTWK---CKWCA---------QCLTCGA 91
Q+ + R + C ++ I ++ +P+ W CK C C TC A
Sbjct: 1251 QKLKDYRKLECLSAEMKKEIKDIVVSVNKLPKAPWDEGVCKVCGVDKDDDSVLLCDTCDA 1310
Query: 92 TGYHIYCTDPPLDHI 106
YH YC +PPL I
Sbjct: 1311 E-YHTYCLNPPLIRI 1324
>sp|Q9W638|REQUA_XENLA Zinc finger protein ubi-d4 A OS=Xenopus laevis GN=req-a PE=2 SV=1
Length = 388
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 36/65 (55%)
Query: 31 WRCLDCTVCEGCAQRHDEGRLILCDECDISYHIYCTDPPLDHIPRGTWKCKWCAQCLTCG 90
W+C++C C C ++ +L+ CD+CD YH+YC PP+ P G+W C C L
Sbjct: 321 WQCIECKCCNICGTSENDDQLLFCDDCDRGYHMYCLVPPVAEPPEGSWSCHLCLDLLKDK 380
Query: 91 ATGYH 95
A+ Y
Sbjct: 381 ASIYQ 385
>sp|Q61103|REQU_MOUSE Zinc finger protein ubi-d4 OS=Mus musculus GN=Dpf2 PE=1 SV=1
Length = 391
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%)
Query: 31 WRCLDCTVCEGCAQRHDEGRLILCDECDISYHIYCTDPPLDHIPRGTWKCKWCAQCLTCG 90
W+C++C C C ++ +L+ CD+CD YH+YC P + P G+W C C L
Sbjct: 322 WQCIECKCCNLCGTSENDDQLLFCDDCDRGYHMYCLTPSMSEPPEGSWSCHLCLDLLKEK 381
Query: 91 ATGYH 95
A+ Y
Sbjct: 382 ASIYQ 386
>sp|Q92785|REQU_HUMAN Zinc finger protein ubi-d4 OS=Homo sapiens GN=DPF2 PE=1 SV=2
Length = 391
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%)
Query: 31 WRCLDCTVCEGCAQRHDEGRLILCDECDISYHIYCTDPPLDHIPRGTWKCKWCAQCLTCG 90
W+C++C C C ++ +L+ CD+CD YH+YC P + P G+W C C L
Sbjct: 322 WQCIECKCCNICGTSENDDQLLFCDDCDRGYHMYCLTPSMSEPPEGSWSCHLCLDLLKEK 381
Query: 91 ATGYH 95
A+ Y
Sbjct: 382 ASIYQ 386
>sp|P56163|DPF1_RAT Zinc finger protein neuro-d4 OS=Rattus norvegicus GN=Dpf1 PE=2 SV=1
Length = 397
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 10/83 (12%)
Query: 22 ISKVILSKGWRCLDCTVCEGCAQRHDEG----------RLILCDECDISYHIYCTDPPLD 71
++ + + W+C++C C C ++G +L+ CD+CD YH+YC PP+
Sbjct: 311 MTAAVRTYRWQCIECKSCSLCGTSENDGASWAGLTPQDQLLFCDDCDRGYHMYCLSPPMA 370
Query: 72 HIPRGTWKCKWCAQCLTCGATGY 94
P G+W C C + L A+ Y
Sbjct: 371 EPPEGSWSCHLCLRHLKEKASAY 393
>sp|Q92782|DPF1_HUMAN Zinc finger protein neuro-d4 OS=Homo sapiens GN=DPF1 PE=2 SV=2
Length = 380
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 10/83 (12%)
Query: 22 ISKVILSKGWRCLDCTVCEGCAQRHDEG----------RLILCDECDISYHIYCTDPPLD 71
++ + + W+C++C C C ++G +L+ CD+CD YH+YC PP+
Sbjct: 294 MTAAVRTYRWQCIECKSCSLCGTSENDGASWAGLTPQDQLLFCDDCDRGYHMYCLSPPMA 353
Query: 72 HIPRGTWKCKWCAQCLTCGATGY 94
P G+W C C + L A+ Y
Sbjct: 354 EPPEGSWSCHLCLRHLKEKASAY 376
>sp|G5EBZ4|LE418_CAEEL Protein let-418 OS=Caenorhabditis elegans GN=let-418 PE=1 SV=1
Length = 1829
Score = 57.8 bits (138), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/96 (30%), Positives = 37/96 (38%), Gaps = 31/96 (32%)
Query: 39 CEGCAQRHDEGRLILCDECDISYHIYCTDPPLDHIPRGTWKCKWCAQ------------- 85
CE C Q +G L+LCD C +YH C D ++ P G W C C +
Sbjct: 259 CEECKQ---DGELLLCDTCPRAYHTVCIDENMEEPPEGDWSCAHCIEHGPEVVKEEPAKQ 315
Query: 86 ----CLTCGAT-----------GYHIYCTDPPLDHI 106
C C T +H YC DPPL +
Sbjct: 316 NDEFCKICKETENLLLCDSCVCSFHAYCIDPPLTEV 351
Score = 57.4 bits (137), Expect = 3e-08, Method: Composition-based stats.
Identities = 34/98 (34%), Positives = 44/98 (44%), Gaps = 23/98 (23%)
Query: 3 CDVI--AYGSVCRDVKLHDLPISKVILSKGWRCLDC------TVCEGCAQRHDE------ 48
CD AY +VC D + + P W C C V E A+++DE
Sbjct: 271 CDTCPRAYHTVCIDENMEEPP------EGDWSCAHCIEHGPEVVKEEPAKQNDEFCKICK 324
Query: 49 --GRLILCDECDISYHIYCTDPPLDHIPR-GTWKCKWC 83
L+LCD C S+H YC DPPL +P+ TW C C
Sbjct: 325 ETENLLLCDSCVCSFHAYCIDPPLTEVPKEETWSCPRC 362
>sp|Q7TMI3|UHRF2_MOUSE E3 ubiquitin-protein ligase UHRF2 OS=Mus musculus GN=Uhrf2 PE=1
SV=1
Length = 803
Score = 57.0 bits (136), Expect = 3e-08, Method: Composition-based stats.
Identities = 23/52 (44%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 33 CLDCTVCEGCAQRHDEGRLILCDECDISYHIYCTDPPLDHIPRGT-WKCKWC 83
C C+ C C ++ D +LCDEC+++YHIYC PPLD +P W C C
Sbjct: 343 CHMCS-CHKCGEKRDPNMQLLCDECNMAYHIYCLSPPLDKVPEEEYWYCPSC 393
>sp|Q12873|CHD3_HUMAN Chromodomain-helicase-DNA-binding protein 3 OS=Homo sapiens GN=CHD3
PE=1 SV=3
Length = 2000
Score = 57.0 bits (136), Expect = 3e-08, Method: Composition-based stats.
Identities = 34/112 (30%), Positives = 42/112 (37%), Gaps = 47/112 (41%)
Query: 39 CEGCAQRHDEGRLILCDECDISYHIYCTDPPLDHIPRGTWKC------------------ 80
CE C Q G +ILCD C +YH+ C DP LD P G W C
Sbjct: 382 CEVCQQ---GGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGVQWEAKEEEEE 438
Query: 81 ------------------KWCAQC------LTCGA--TGYHIYCTDPPLDHI 106
++C C L C A + YHI+C +PPL I
Sbjct: 439 YEEEGEEEGEKEEEDDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDI 490
Score = 55.1 bits (131), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/48 (47%), Positives = 27/48 (56%), Gaps = 6/48 (12%)
Query: 36 CTVCEGCAQRHDEGRLILCDECDISYHIYCTDPPLDHIPRGTWKCKWC 83
C VC+ D G L+ CD C SYHI+C +PPL IP G W C C
Sbjct: 459 CRVCK------DGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRC 500
>sp|Q62240|KDM5D_MOUSE Lysine-specific demethylase 5D OS=Mus musculus GN=Kdm5d PE=2 SV=2
Length = 1548
Score = 57.0 bits (136), Expect = 3e-08, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 34 LDCTVCEGCAQRHDEGRLILCDECDISYHIYCTDPPLDHIPRGTWKCKWC--AQC 86
++ VC C++ + + +LCD C +YHI+C PPL +P+G W+C C A+C
Sbjct: 321 MNSYVCRICSRGDEVDKFLLCDGCSDNYHIFCLLPPLSEVPKGVWRCPKCILAEC 375
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.327 0.142 0.511
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,454,538
Number of Sequences: 539616
Number of extensions: 2041798
Number of successful extensions: 5693
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 142
Number of HSP's successfully gapped in prelim test: 71
Number of HSP's that attempted gapping in prelim test: 5311
Number of HSP's gapped (non-prelim): 376
length of query: 131
length of database: 191,569,459
effective HSP length: 97
effective length of query: 34
effective length of database: 139,226,707
effective search space: 4733708038
effective search space used: 4733708038
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 55 (25.8 bits)