BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3928
(115 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225708530|gb|ACO10111.1| La protein homolog [Osmerus mordax]
Length = 220
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/69 (56%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
R V E LP + +H +IE VFSK G V YVS+PK+K++G+ KGFAFVEF T+E+A KA+E
Sbjct: 122 RTVYVELLPKDVKHGWIERVFSKCGNVVYVSIPKYKTSGQSKGFAFVEFETEEQAQKAIE 181
Query: 73 LGLNPCPTD 81
+ NP P D
Sbjct: 182 MLNNP-PED 189
>gi|113931440|ref|NP_001039168.1| la-related protein 7 [Xenopus (Silurana) tropicalis]
gi|123910245|sp|Q28G87.1|LARP7_XENTR RecName: Full=La-related protein 7; AltName: Full=La
ribonucleoprotein domain family member 7
gi|89266879|emb|CAJ83882.1| novel La domain and RNA recognition motif. (a.k.a. RRM, RBD, or RNP
domain) containing protein [Xenopus (Silurana)
tropicalis]
Length = 593
Score = 77.8 bits (190), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 46/66 (69%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
R V E LP H +IE VF KYG V YVS+P++KSTG KGFAF+EF T+E+A KA+
Sbjct: 126 SRTVYVELLPKNVTHSWIERVFGKYGMVVYVSIPRYKSTGDPKGFAFIEFETQEQAAKAI 185
Query: 72 ELGLNP 77
E+ NP
Sbjct: 186 EVLNNP 191
>gi|390333306|ref|XP_793889.3| PREDICTED: uncharacterized protein LOC589145 [Strongylocentrotus
purpuratus]
Length = 643
Score = 77.4 bits (189), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 52/87 (59%)
Query: 18 EKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLNP 77
E LP +A+HD + FS GKV YVSLP++KST +KGFAF+EF T EEA +A EL NP
Sbjct: 130 ECLPKKADHDLLRKAFSYCGKVVYVSLPRYKSTSDIKGFAFIEFETPEEADQACELMNNP 189
Query: 78 CPTDYQSSILTTTSRLSFGITPLGFES 104
P + R + I PL F+
Sbjct: 190 PPDMMDRAGKFPKMRGNKRIVPLEFDQ 216
>gi|163916279|gb|AAI57142.1| Unknown (protein for IMAGE:7537566) [Xenopus (Silurana) tropicalis]
Length = 233
Score = 77.4 bits (189), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 46/65 (70%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
R V E LP H +IE VF KYG V YVS+P++KSTG KGFAF+EF T+E+A KA+E
Sbjct: 127 RTVYVELLPKNVTHSWIERVFGKYGMVVYVSIPRYKSTGDPKGFAFIEFETQEQAAKAIE 186
Query: 73 LGLNP 77
+ NP
Sbjct: 187 VLNNP 191
>gi|326919006|ref|XP_003205775.1| PREDICTED: la-related protein 7-like [Meleagris gallopavo]
Length = 597
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 44/65 (67%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
R V E LP H +IE VF K G V YVS+P++KSTG KGFAFVEF TKE+A KA+E
Sbjct: 127 RTVYVELLPKNVNHSWIERVFGKCGNVVYVSIPRYKSTGDPKGFAFVEFETKEQAEKAIE 186
Query: 73 LGLNP 77
NP
Sbjct: 187 FLNNP 191
>gi|363733597|ref|XP_420643.3| PREDICTED: la-related protein 7 [Gallus gallus]
Length = 647
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 44/65 (67%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
R V E LP H +IE VF K G V YVS+P++KSTG KGFAFVEF TKE+A KA+E
Sbjct: 179 RTVYVELLPKNVNHSWIERVFGKCGNVVYVSIPRYKSTGDPKGFAFVEFETKEQAEKAIE 238
Query: 73 LGLNP 77
NP
Sbjct: 239 FLNNP 243
>gi|449265844|gb|EMC76974.1| La-related protein 7 [Columba livia]
Length = 585
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 44/66 (66%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
R V E LP H +IE VF K G V YVS+P++KSTG KGFAFVEF TKE+A KA+
Sbjct: 123 SRTVYVELLPKNVNHSWIERVFGKCGNVVYVSIPRYKSTGNPKGFAFVEFETKEQAEKAI 182
Query: 72 ELGLNP 77
E NP
Sbjct: 183 EFLNNP 188
>gi|53134741|emb|CAG32359.1| hypothetical protein RCJMB04_23k13 [Gallus gallus]
Length = 233
Score = 76.3 bits (186), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 44/65 (67%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
R V E LP H +IE VF K G V YVS+P++KSTG KGFAFVEF TKE+A KA+E
Sbjct: 127 RTVYVELLPKNVNHSWIERVFGKCGNVVYVSIPRYKSTGDPKGFAFVEFETKEQAEKAIE 186
Query: 73 LGLNP 77
NP
Sbjct: 187 FLNNP 191
>gi|345326822|ref|XP_001507431.2| PREDICTED: la-related protein 7 [Ornithorhynchus anatinus]
Length = 678
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 44/65 (67%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
R V E LP + H +IE VF K G V Y+S+P +KSTG KGFAFVEF TKE+A KA+E
Sbjct: 125 RTVYVELLPKDVNHSWIERVFGKCGNVVYISIPHYKSTGDPKGFAFVEFETKEQADKAIE 184
Query: 73 LGLNP 77
NP
Sbjct: 185 FLNNP 189
>gi|449499453|ref|XP_002196501.2| PREDICTED: la-related protein 7-like [Taeniopygia guttata]
Length = 590
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 44/66 (66%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
R V E LP H +IE VF K G V YVS+P+++STG KGFAFVEF TKE+A KA+
Sbjct: 126 SRTVYVELLPKNVNHSWIERVFGKCGNVVYVSIPRYRSTGDPKGFAFVEFETKEQAEKAI 185
Query: 72 ELGLNP 77
E NP
Sbjct: 186 EFLNNP 191
>gi|432920030|ref|XP_004079803.1| PREDICTED: la-related protein 7-like [Oryzias latipes]
Length = 520
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 18 EKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLNP 77
E LP + H +IE VFSK G VTYVS+P++++TG KGFAFVEF +E+A KA+E+ NP
Sbjct: 132 ELLPKDVSHSWIERVFSKCGNVTYVSIPRYRTTGDSKGFAFVEFENEEQAQKAIEMLNNP 191
Query: 78 CPTD 81
P D
Sbjct: 192 -PED 194
>gi|291401255|ref|XP_002717039.1| PREDICTED: La ribonucleoprotein domain family, member 7 isoform 2
[Oryctolagus cuniculus]
Length = 571
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 43/65 (66%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
R V E LP H +IE VF K G V YVS+P +KSTG KGFAFVEF TKE+A KA+E
Sbjct: 124 RTVYVELLPKNVNHSWIERVFGKCGNVVYVSIPHYKSTGDPKGFAFVEFETKEQAAKAIE 183
Query: 73 LGLNP 77
NP
Sbjct: 184 FLNNP 188
>gi|291401253|ref|XP_002717038.1| PREDICTED: La ribonucleoprotein domain family, member 7 isoform 1
[Oryctolagus cuniculus]
Length = 579
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 43/65 (66%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
R V E LP H +IE VF K G V YVS+P +KSTG KGFAFVEF TKE+A KA+E
Sbjct: 124 RTVYVELLPKNVNHSWIERVFGKCGNVVYVSIPHYKSTGDPKGFAFVEFETKEQAAKAIE 183
Query: 73 LGLNP 77
NP
Sbjct: 184 FLNNP 188
>gi|388490152|ref|NP_001253968.1| la-related protein 7 isoform 2 [Homo sapiens]
gi|119626689|gb|EAX06284.1| HDCMA18P protein, isoform CRA_b [Homo sapiens]
gi|187611076|gb|ACD13786.1| La-related protein 7 [Homo sapiens]
Length = 589
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 43/65 (66%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
R V E LP H +IE VF K G V Y+S+P +KSTG KGFAFVEF TKE+A KA+E
Sbjct: 132 RTVYVELLPKNVNHSWIERVFGKCGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIE 191
Query: 73 LGLNP 77
NP
Sbjct: 192 FLNNP 196
>gi|397519888|ref|XP_003830084.1| PREDICTED: LOW QUALITY PROTEIN: la-related protein 7 [Pan paniscus]
Length = 589
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 43/65 (66%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
R V E LP H +IE VF K G V Y+S+P +KSTG KGFAFVEF TKE+A KA+E
Sbjct: 132 RTVYVELLPKNVNHSWIERVFGKCGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIE 191
Query: 73 LGLNP 77
NP
Sbjct: 192 FLNNP 196
>gi|297674196|ref|XP_002815120.1| PREDICTED: la-related protein 7 isoform 1 [Pongo abelii]
Length = 589
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 43/65 (66%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
R V E LP H +IE VF K G V Y+S+P +KSTG KGFAFVEF TKE+A KA+E
Sbjct: 132 RTVYVELLPKNVNHSWIERVFGKCGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIE 191
Query: 73 LGLNP 77
NP
Sbjct: 192 FLNNP 196
>gi|426345271|ref|XP_004040344.1| PREDICTED: la-related protein 7 isoform 3 [Gorilla gorilla gorilla]
Length = 589
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 43/65 (66%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
R V E LP H +IE VF K G V Y+S+P +KSTG KGFAFVEF TKE+A KA+E
Sbjct: 132 RTVYVELLPKNVNHSWIERVFGKCGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIE 191
Query: 73 LGLNP 77
NP
Sbjct: 192 FLNNP 196
>gi|109809739|ref|NP_056269.1| la-related protein 7 isoform 1 [Homo sapiens]
gi|109809741|ref|NP_057732.2| la-related protein 7 isoform 1 [Homo sapiens]
gi|121945944|sp|Q4G0J3.1|LARP7_HUMAN RecName: Full=La-related protein 7; AltName: Full=La
ribonucleoprotein domain family member 7; AltName:
Full=P-TEFb-interaction protein for 7SK stability;
Short=PIP7S
gi|71052154|gb|AAH66945.1| LARP7 protein [Homo sapiens]
Length = 582
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 43/65 (66%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
R V E LP H +IE VF K G V Y+S+P +KSTG KGFAFVEF TKE+A KA+E
Sbjct: 125 RTVYVELLPKNVNHSWIERVFGKCGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIE 184
Query: 73 LGLNP 77
NP
Sbjct: 185 FLNNP 189
>gi|441658345|ref|XP_003269385.2| PREDICTED: la-related protein 7 isoform 1 [Nomascus leucogenys]
Length = 588
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 43/65 (66%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
R V E LP H +IE VF K G V Y+S+P +KSTG KGFAFVEF TKE+A KA+E
Sbjct: 132 RTVYVELLPKNVNHSWIERVFGKCGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIE 191
Query: 73 LGLNP 77
NP
Sbjct: 192 FLNNP 196
>gi|426345267|ref|XP_004040342.1| PREDICTED: la-related protein 7 isoform 1 [Gorilla gorilla gorilla]
gi|426345269|ref|XP_004040343.1| PREDICTED: la-related protein 7 isoform 2 [Gorilla gorilla gorilla]
Length = 582
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 43/65 (66%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
R V E LP H +IE VF K G V Y+S+P +KSTG KGFAFVEF TKE+A KA+E
Sbjct: 125 RTVYVELLPKNVNHSWIERVFGKCGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIE 184
Query: 73 LGLNP 77
NP
Sbjct: 185 FLNNP 189
>gi|114595713|ref|XP_001144338.1| PREDICTED: la-related protein 7 isoform 9 [Pan troglodytes]
Length = 616
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 43/65 (66%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
R V E LP H +IE VF K G V Y+S+P +KSTG KGFAFVEF TKE+A KA+E
Sbjct: 159 RTVYVELLPKNVNHSWIERVFGKCGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIE 218
Query: 73 LGLNP 77
NP
Sbjct: 219 FLNNP 223
>gi|350596592|ref|XP_003361398.2| PREDICTED: la-related protein 7 [Sus scrofa]
Length = 521
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 43/65 (66%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
R V E LP H +IE VF K G V Y+S+P +KSTG KGFAFVEF TKE+A KA+E
Sbjct: 125 RTVYVELLPKNVNHSWIERVFGKCGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIE 184
Query: 73 LGLNP 77
NP
Sbjct: 185 FLNNP 189
>gi|410333473|gb|JAA35683.1| La ribonucleoprotein domain family, member 7 [Pan troglodytes]
Length = 582
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 43/65 (66%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
R V E LP H +IE VF K G V Y+S+P +KSTG KGFAFVEF TKE+A KA+E
Sbjct: 125 RTVYVELLPKNVNHSWIERVFGKCGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIE 184
Query: 73 LGLNP 77
NP
Sbjct: 185 FLNNP 189
>gi|297674198|ref|XP_002815121.1| PREDICTED: la-related protein 7 isoform 2 [Pongo abelii]
gi|297674200|ref|XP_002815122.1| PREDICTED: la-related protein 7 isoform 3 [Pongo abelii]
Length = 582
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 43/65 (66%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
R V E LP H +IE VF K G V Y+S+P +KSTG KGFAFVEF TKE+A KA+E
Sbjct: 125 RTVYVELLPKNVNHSWIERVFGKCGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIE 184
Query: 73 LGLNP 77
NP
Sbjct: 185 FLNNP 189
>gi|114595715|ref|XP_001144568.1| PREDICTED: la-related protein 7 isoform 12 [Pan troglodytes]
gi|114595719|ref|XP_001144640.1| PREDICTED: la-related protein 7 isoform 13 [Pan troglodytes]
gi|410218494|gb|JAA06466.1| La ribonucleoprotein domain family, member 7 [Pan troglodytes]
gi|410264394|gb|JAA20163.1| La ribonucleoprotein domain family, member 7 [Pan troglodytes]
gi|410295050|gb|JAA26125.1| La ribonucleoprotein domain family, member 7 [Pan troglodytes]
Length = 582
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 43/65 (66%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
R V E LP H +IE VF K G V Y+S+P +KSTG KGFAFVEF TKE+A KA+E
Sbjct: 125 RTVYVELLPKNVNHSWIERVFGKCGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIE 184
Query: 73 LGLNP 77
NP
Sbjct: 185 FLNNP 189
>gi|403295688|ref|XP_003938763.1| PREDICTED: la-related protein 7-like [Saimiri boliviensis
boliviensis]
Length = 219
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/61 (59%), Positives = 43/61 (70%)
Query: 17 KEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLN 76
KE LP H +IE VF K G V Y+S+P +KSTG KGFAFVEF TKE+A KA+E+G
Sbjct: 31 KELLPKNVNHSWIERVFGKCGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIEVGPY 90
Query: 77 P 77
P
Sbjct: 91 P 91
>gi|395542246|ref|XP_003773044.1| PREDICTED: la-related protein 7 [Sarcophilus harrisii]
Length = 650
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 43/65 (66%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
R V E LP H +IE VF K G V Y+S+P +KSTG KGFAFVEF TKE+A KA+E
Sbjct: 185 RTVYVELLPKNVNHSWIERVFGKCGNVVYISIPHYKSTGDPKGFAFVEFETKEQADKAIE 244
Query: 73 LGLNP 77
NP
Sbjct: 245 FLNNP 249
>gi|75076233|sp|Q4R627.1|LARP7_MACFA RecName: Full=La-related protein 7; AltName: Full=La
ribonucleoprotein domain family member 7
gi|67970208|dbj|BAE01448.1| unnamed protein product [Macaca fascicularis]
gi|380813622|gb|AFE78685.1| la-related protein 7 [Macaca mulatta]
gi|383419049|gb|AFH32738.1| la-related protein 7 [Macaca mulatta]
gi|384947590|gb|AFI37400.1| la-related protein 7 [Macaca mulatta]
Length = 581
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 43/65 (66%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
R V E LP H +IE VF K G V Y+S+P +KSTG KGFAFVEF TKE+A KA+E
Sbjct: 125 RTVYVELLPKNVNHSWIERVFGKCGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIE 184
Query: 73 LGLNP 77
NP
Sbjct: 185 FLNNP 189
>gi|355687549|gb|EHH26133.1| hypothetical protein EGK_16029, partial [Macaca mulatta]
Length = 529
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 43/65 (66%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
R V E LP H +IE VF K G V Y+S+P +KSTG KGFAFVEF TKE+A KA+E
Sbjct: 125 RTVYVELLPKNVNHSWIERVFGKCGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIE 184
Query: 73 LGLNP 77
NP
Sbjct: 185 FLNNP 189
>gi|296486777|tpg|DAA28890.1| TPA: La ribonucleoprotein domain family, member 7 [Bos taurus]
Length = 577
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 43/65 (66%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
R V E LP H +IE VF K G V Y+S+P +KSTG KGFAFVEF TKE+A KA+E
Sbjct: 123 RTVYVELLPKNVNHSWIERVFGKCGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIE 182
Query: 73 LGLNP 77
NP
Sbjct: 183 FLNNP 187
>gi|426345277|ref|XP_004040347.1| PREDICTED: la-related protein 7-like [Gorilla gorilla gorilla]
Length = 498
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 43/65 (66%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
R V E LP H +IE VF K G V Y+S+P +KSTG KGFAFVEF TKE+A KA+E
Sbjct: 46 RTVYVELLPKNVNHSWIERVFGKCGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIE 105
Query: 73 LGLNP 77
NP
Sbjct: 106 FLNNP 110
>gi|355749516|gb|EHH53915.1| hypothetical protein EGM_14629 [Macaca fascicularis]
Length = 582
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 43/65 (66%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
R V E LP H +IE VF K G V Y+S+P +KSTG KGFAFVEF TKE+A KA+E
Sbjct: 125 RTVYVELLPKNVNHSWIERVFGKCGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIE 184
Query: 73 LGLNP 77
NP
Sbjct: 185 FLNNP 189
>gi|345091040|ref|NP_001230744.1| La ribonucleoprotein domain family, member 7 [Sus scrofa]
Length = 583
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 43/65 (66%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
R V E LP H +IE VF K G V Y+S+P +KSTG KGFAFVEF TKE+A KA+E
Sbjct: 125 RTVYVELLPKNVNHSWIERVFGKCGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIE 184
Query: 73 LGLNP 77
NP
Sbjct: 185 FLNNP 189
>gi|344277322|ref|XP_003410451.1| PREDICTED: la-related protein 7 [Loxodonta africana]
Length = 581
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 43/65 (66%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
R V E LP H +IE VF K G V Y+S+P +KSTG KGFAFVEF TKE+A KA+E
Sbjct: 125 RTVYVELLPKNVNHSWIERVFGKCGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIE 184
Query: 73 LGLNP 77
NP
Sbjct: 185 FLNNP 189
>gi|410956996|ref|XP_003985121.1| PREDICTED: LOW QUALITY PROTEIN: la-related protein 7 [Felis catus]
Length = 572
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 43/65 (66%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
R V E LP H +IE VF K G V Y+S+P +KSTG KGFAFVEF TKE+A KA+E
Sbjct: 125 RTVYVELLPKNVNHSWIERVFGKCGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIE 184
Query: 73 LGLNP 77
NP
Sbjct: 185 FLNNP 189
>gi|402870266|ref|XP_003899154.1| PREDICTED: la-related protein 7 [Papio anubis]
Length = 581
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 43/65 (66%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
R V E LP H +IE VF K G V Y+S+P +KSTG KGFAFVEF TKE+A KA+E
Sbjct: 125 RTVYVELLPKNVNHSWIERVFGKCGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIE 184
Query: 73 LGLNP 77
NP
Sbjct: 185 FLNNP 189
>gi|328802713|ref|NP_001068652.2| la-related protein 7 [Bos taurus]
Length = 572
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 43/65 (66%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
R V E LP H +IE VF K G V Y+S+P +KSTG KGFAFVEF TKE+A KA+E
Sbjct: 123 RTVYVELLPKNVNHSWIERVFGKCGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIE 182
Query: 73 LGLNP 77
NP
Sbjct: 183 FLNNP 187
>gi|395851325|ref|XP_003798212.1| PREDICTED: la-related protein 7 [Otolemur garnettii]
Length = 584
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 43/65 (66%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
R V E LP H +IE VF K G V Y+S+P +KSTG KGFAFVEF TKE+A KA+E
Sbjct: 125 RTVYVELLPKNVNHSWIERVFGKCGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIE 184
Query: 73 LGLNP 77
NP
Sbjct: 185 FLNNP 189
>gi|281344045|gb|EFB19629.1| hypothetical protein PANDA_015632 [Ailuropoda melanoleuca]
Length = 556
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 43/65 (66%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
R V E LP H +IE VF K G V Y+S+P +KSTG KGFAFVEF TKE+A KA+E
Sbjct: 125 RTVYVELLPKNVNHSWIERVFGKCGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIE 184
Query: 73 LGLNP 77
NP
Sbjct: 185 FLNNP 189
>gi|301781244|ref|XP_002926038.1| PREDICTED: la-related protein 7-like [Ailuropoda melanoleuca]
Length = 580
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 43/65 (66%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
R V E LP H +IE VF K G V Y+S+P +KSTG KGFAFVEF TKE+A KA+E
Sbjct: 125 RTVYVELLPKNVNHSWIERVFGKCGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIE 184
Query: 73 LGLNP 77
NP
Sbjct: 185 FLNNP 189
>gi|410038620|ref|XP_003950445.1| PREDICTED: la-related protein 7 [Pan troglodytes]
Length = 503
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 43/65 (66%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
R V E LP H +IE VF K G V Y+S+P +KSTG KGFAFVEF TKE+A KA+E
Sbjct: 46 RTVYVELLPKNVNHSWIERVFGKCGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIE 105
Query: 73 LGLNP 77
NP
Sbjct: 106 FLNNP 110
>gi|126331139|ref|XP_001362205.1| PREDICTED: la-related protein 7 isoform 1 [Monodelphis domestica]
Length = 597
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 43/65 (66%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
R V E LP H +IE VF K G V Y+S+P +KSTG KGFAFVEF TKE+A KA+E
Sbjct: 125 RTVYVELLPKNVNHSWIERVFGKCGNVVYISIPHYKSTGDPKGFAFVEFETKEQADKAIE 184
Query: 73 LGLNP 77
NP
Sbjct: 185 FLNNP 189
>gi|426231265|ref|XP_004009660.1| PREDICTED: la-related protein 7 [Ovis aries]
Length = 579
Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 43/65 (66%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
R V E LP H +IE VF K G V Y+S+P +KSTG KGFAFVEF TKE+A KA+E
Sbjct: 124 RTVYVELLPKNVNHSWIERVFGKCGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIE 183
Query: 73 LGLNP 77
NP
Sbjct: 184 FLNNP 188
>gi|403275528|ref|XP_003929492.1| PREDICTED: la-related protein 7 [Saimiri boliviensis boliviensis]
Length = 581
Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 43/65 (66%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
R V E LP H +IE VF K G V Y+S+P +KSTG KGFAFVEF TKE+A KA+E
Sbjct: 125 RTVYVELLPKNVNHSWIERVFGKCGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIE 184
Query: 73 LGLNP 77
NP
Sbjct: 185 FLNNP 189
>gi|426345273|ref|XP_004040345.1| PREDICTED: la-related protein 7 isoform 4 [Gorilla gorilla gorilla]
Length = 503
Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 43/65 (66%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
R V E LP H +IE VF K G V Y+S+P +KSTG KGFAFVEF TKE+A KA+E
Sbjct: 46 RTVYVELLPKNVNHSWIERVFGKCGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIE 105
Query: 73 LGLNP 77
NP
Sbjct: 106 FLNNP 110
>gi|297293252|ref|XP_001092044.2| PREDICTED: la-related protein 7 [Macaca mulatta]
Length = 549
Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 43/65 (66%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
R V E LP H +IE VF K G V Y+S+P +KSTG KGFAFVEF TKE+A KA+E
Sbjct: 92 RTVYVELLPKNVNHSWIERVFGKCGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIE 151
Query: 73 LGLNP 77
NP
Sbjct: 152 FLNNP 156
>gi|296195729|ref|XP_002745505.1| PREDICTED: la-related protein 7 [Callithrix jacchus]
Length = 581
Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 43/65 (66%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
R V E LP H +IE VF K G V Y+S+P +KSTG KGFAFVEF TKE+A KA+E
Sbjct: 125 RTVYVELLPKNVNHSWIERVFGKCGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIE 184
Query: 73 LGLNP 77
NP
Sbjct: 185 FLNNP 189
>gi|345795869|ref|XP_535698.3| PREDICTED: LOW QUALITY PROTEIN: la-related protein 7 [Canis lupus
familiaris]
Length = 580
Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 43/65 (66%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
R V E LP H +IE VF K G V Y+S+P +KSTG KGFAFVEF TKE+A KA+E
Sbjct: 124 RTVYVELLPKNVNHSWIERVFGKCGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIE 183
Query: 73 LGLNP 77
NP
Sbjct: 184 FLNNP 188
>gi|149698277|ref|XP_001503501.1| PREDICTED: la-related protein 7 [Equus caballus]
Length = 582
Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 43/65 (66%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
R V E LP H +IE VF K G V Y+S+P +KSTG KGFAFVEF TKE+A KA+E
Sbjct: 125 RTVYVELLPKNVNHSWIERVFGKCGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIE 184
Query: 73 LGLNP 77
NP
Sbjct: 185 FLNNP 189
>gi|92096937|gb|AAI14862.1| LARP7 protein [Bos taurus]
Length = 221
Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 43/65 (66%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
R V E LP H +IE VF K G V Y+S+P +KSTG KGFAFVEF TKE+A KA+E
Sbjct: 123 RTVYVELLPKNVNHSWIERVFGKCGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIE 182
Query: 73 LGLNP 77
NP
Sbjct: 183 FLNNP 187
>gi|154757386|gb|AAI51801.1| LARP7 protein [Bos taurus]
Length = 221
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 43/65 (66%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
R V E LP H +IE VF K G V Y+S+P +KSTG KGFAFVEF TKE+A KA+E
Sbjct: 123 RTVYVELLPKNVNHSWIERVFGKCGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIE 182
Query: 73 LGLNP 77
NP
Sbjct: 183 FLNNP 187
>gi|351707529|gb|EHB10448.1| La-related protein 7 [Heterocephalus glaber]
Length = 577
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 43/65 (66%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
R V E LP H +IE VF K G V Y+S+P +KSTG KGFAFVEF TKE+A KA+E
Sbjct: 121 RTVYVELLPKNVNHSWIEKVFGKCGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIE 180
Query: 73 LGLNP 77
NP
Sbjct: 181 FLNNP 185
>gi|348543283|ref|XP_003459113.1| PREDICTED: la-related protein 7-like [Oreochromis niloticus]
Length = 537
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 49/74 (66%), Gaps = 1/74 (1%)
Query: 8 NKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEA 67
N R V E LP + H +IE VF+K G V YVS+P++KS+G KGFAFVEF +E+A
Sbjct: 119 NDVDSRTVYVELLPKDVTHSWIERVFTKCGNVVYVSIPRYKSSGDSKGFAFVEFEKEEQA 178
Query: 68 TKALELGLNPCPTD 81
KA+E+ NP P D
Sbjct: 179 QKAIEMLNNP-PED 191
>gi|417402900|gb|JAA48280.1| Putative la-related protein 7 [Desmodus rotundus]
Length = 574
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 43/65 (66%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
R V E LP H +IE VF K G V Y+S+P +KSTG KGFAFVEF TKE+A KA+E
Sbjct: 124 RTVYVELLPKNVNHSWIERVFGKCGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIE 183
Query: 73 LGLNP 77
NP
Sbjct: 184 FLNNP 188
>gi|110665742|ref|NP_613059.2| la-related protein 7 [Mus musculus]
gi|134034152|sp|Q05CL8.2|LARP7_MOUSE RecName: Full=La-related protein 7; AltName: Full=La
ribonucleoprotein domain family member 7
gi|151555613|gb|AAI48405.1| La ribonucleoprotein domain family, member 7 [synthetic construct]
gi|157170500|gb|AAI53030.1| La ribonucleoprotein domain family, member 7 [synthetic construct]
Length = 570
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 43/65 (66%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
R V E LP H +IE VF K G V Y+S+P +KSTG KGFAFVEF TKE+A KA+E
Sbjct: 119 RTVYVELLPKNVTHSWIERVFGKCGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIE 178
Query: 73 LGLNP 77
NP
Sbjct: 179 FLNNP 183
>gi|348564517|ref|XP_003468051.1| PREDICTED: la-related protein 7-like [Cavia porcellus]
Length = 571
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 43/65 (66%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
R V E LP H +IE VF K G V Y+S+P +KSTG KGFAFVEF TKE+A KA+E
Sbjct: 121 RTVYVELLPKNVNHSWIERVFGKCGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIE 180
Query: 73 LGLNP 77
NP
Sbjct: 181 FLNNP 185
>gi|380772503|gb|AFE61891.1| Larp7 [Mus musculus]
Length = 570
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 43/65 (66%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
R V E LP H +IE VF K G V Y+S+P +KSTG KGFAFVEF TKE+A KA+E
Sbjct: 119 RTVYVELLPKNVTHSWIERVFGKCGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIE 178
Query: 73 LGLNP 77
NP
Sbjct: 179 FLNNP 183
>gi|148680318|gb|EDL12265.1| La ribonucleoprotein domain family, member 7, isoform CRA_a [Mus
musculus]
Length = 499
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 43/65 (66%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
R V E LP H +IE VF K G V Y+S+P +KSTG KGFAFVEF TKE+A KA+E
Sbjct: 47 RTVYVELLPKNVTHSWIERVFGKCGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIE 106
Query: 73 LGLNP 77
NP
Sbjct: 107 FLNNP 111
>gi|148680319|gb|EDL12266.1| La ribonucleoprotein domain family, member 7, isoform CRA_b [Mus
musculus]
Length = 465
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 43/65 (66%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
R V E LP H +IE VF K G V Y+S+P +KSTG KGFAFVEF TKE+A KA+E
Sbjct: 14 RTVYVELLPKNVTHSWIERVFGKCGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIE 73
Query: 73 LGLNP 77
NP
Sbjct: 74 FLNNP 78
>gi|344254584|gb|EGW10688.1| La-related protein 7 [Cricetulus griseus]
Length = 217
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 43/65 (66%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
R V E LP H +IE VF K G V Y+S+P +KSTG KGFAFVEF TKE+A KA+E
Sbjct: 120 RTVYVELLPKNVTHSWIERVFGKCGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIE 179
Query: 73 LGLNP 77
NP
Sbjct: 180 FLNNP 184
>gi|74187629|dbj|BAE36753.1| unnamed protein product [Mus musculus]
Length = 305
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 43/65 (66%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
R V E LP H +IE VF K G V Y+S+P +KSTG KGFAFVEF TKE+A KA+E
Sbjct: 119 RTVYVELLPKNVTHSWIERVFGKCGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIE 178
Query: 73 LGLNP 77
NP
Sbjct: 179 FLNNP 183
>gi|348041357|ref|NP_001037755.2| la-related protein 7 [Rattus norvegicus]
gi|134034153|sp|Q5XI01.2|LARP7_RAT RecName: Full=La-related protein 7; AltName: Full=La
ribonucleoprotein domain family member 7
Length = 571
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 43/65 (66%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
R V E LP H +IE VF K G V Y+S+P +KSTG KGFAFVEF TKE+A KA+E
Sbjct: 120 RTVYVELLPKNVTHSWIERVFGKCGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIE 179
Query: 73 LGLNP 77
NP
Sbjct: 180 FLNNP 184
>gi|12849735|dbj|BAB28459.1| unnamed protein product [Mus musculus]
Length = 214
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 43/65 (66%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
R V E LP H +IE VF K G V Y+S+P +KSTG KGFAFVEF TKE+A KA+E
Sbjct: 119 RTVYVELLPKNVTHSWIERVFGKCGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIE 178
Query: 73 LGLNP 77
NP
Sbjct: 179 FLNNP 183
>gi|116283672|gb|AAH23165.1| Larp7 protein [Mus musculus]
Length = 366
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 43/65 (66%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
R V E LP H +IE VF K G V Y+S+P +KSTG KGFAFVEF TKE+A KA+E
Sbjct: 119 RTVYVELLPKNVTHSWIERVFGKCGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIE 178
Query: 73 LGLNP 77
NP
Sbjct: 179 FLNNP 183
>gi|12853228|dbj|BAB29687.1| unnamed protein product [Mus musculus]
Length = 342
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 43/65 (66%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
R V E LP H +IE VF K G V Y+S+P +KSTG KGFAFVEF TKE+A KA+E
Sbjct: 119 RTVYVELLPKNVTHSWIERVFGKCGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIE 178
Query: 73 LGLNP 77
NP
Sbjct: 179 FLNNP 183
>gi|156360689|ref|XP_001625158.1| predicted protein [Nematostella vectensis]
gi|156211977|gb|EDO33058.1| predicted protein [Nematostella vectensis]
Length = 835
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 52/75 (69%)
Query: 1 MAELVENNKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVE 60
MA L + V EKLP A+HD+++ VFS++GKV YVSLP+FK G++KGFAF+E
Sbjct: 103 MAPLPQPRNVDAETVYVEKLPFHADHDWLKKVFSEFGKVLYVSLPRFKHNGEIKGFAFIE 162
Query: 61 FSTKEEATKALELGL 75
F +K++A ++ G+
Sbjct: 163 FESKQQAEHVVQDGV 177
>gi|53733605|gb|AAH83898.1| La ribonucleoprotein domain family, member 7 [Rattus norvegicus]
Length = 497
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 43/65 (66%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
R V E LP H +IE VF K G V Y+S+P +KSTG KGFAFVEF TKE+A KA+E
Sbjct: 46 RTVYVELLPKNVTHSWIERVFGKCGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIE 105
Query: 73 LGLNP 77
NP
Sbjct: 106 FLNNP 110
>gi|327274210|ref|XP_003221871.1| PREDICTED: la-related protein 7-like [Anolis carolinensis]
Length = 591
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
R V E LP H +IE VF K G V YVS+P++K+T KGFAFVEF TKE+A KA+
Sbjct: 126 SRTVYVELLPKNVNHSWIERVFGKCGNVVYVSIPRYKTTADPKGFAFVEFETKEQAEKAI 185
Query: 72 ELGLNPCPTD 81
E NP P D
Sbjct: 186 EFLNNP-PED 194
>gi|242024527|ref|XP_002432679.1| lupus la ribonucleoprotein, putative [Pediculus humanus corporis]
gi|212518149|gb|EEB19941.1| lupus la ribonucleoprotein, putative [Pediculus humanus corporis]
Length = 527
Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 32/55 (58%), Positives = 45/55 (81%)
Query: 18 EKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
E+L +A+HD+++ +FS+YGKV Y+S+PK+K TGK+KGFAFVEF T E A AL+
Sbjct: 120 EQLSYDADHDWLKLIFSRYGKVDYISIPKYKGTGKIKGFAFVEFETPESAKAALD 174
>gi|148698996|gb|EDL30943.1| mCG13300 [Mus musculus]
Length = 257
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/62 (58%), Positives = 43/62 (69%)
Query: 16 LKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGL 75
L+E LP H +IE VF K G V Y+S+P +KSTG KGFAFVEF TKE+A KA+E
Sbjct: 1 LQELLPKNVTHSWIERVFGKCGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIEFLN 60
Query: 76 NP 77
NP
Sbjct: 61 NP 62
>gi|328699574|ref|XP_001949188.2| PREDICTED: la-related protein 7-like [Acyrthosiphon pisum]
Length = 540
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 43/54 (79%), Gaps = 1/54 (1%)
Query: 18 EKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
E+LPP+A+HD+I+S+F KYG V Y+SLPKFKS G +K FAF+EF +E A K L
Sbjct: 126 EQLPPKADHDWIKSMFEKYGNVAYISLPKFKS-GTIKRFAFIEFDDEESAIKVL 178
>gi|383859770|ref|XP_003705365.1| PREDICTED: uncharacterized protein LOC100883293 [Megachile
rotundata]
Length = 612
Score = 72.8 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 32/57 (56%), Positives = 44/57 (77%)
Query: 15 VLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
V + LPP+A+H+ + ++FS+YG+V YVS+PKFK K+KGFAFVEF+ EEA K L
Sbjct: 142 VYVQNLPPDADHEMLSTIFSQYGQVVYVSVPKFKINKKIKGFAFVEFNAPEEANKCL 198
>gi|349605869|gb|AEQ00960.1| La-like protein 7-like protein, partial [Equus caballus]
Length = 452
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 40/58 (68%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLNP 77
LP H +IE VF K G V Y+S+P +KSTG KGFAFVEF TKE+A KA+E NP
Sbjct: 2 LPKNVNHSWIERVFGKCGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIEFLNNP 59
>gi|345492037|ref|XP_001600355.2| PREDICTED: la-related protein 7-like [Nasonia vitripennis]
Length = 638
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 44/54 (81%)
Query: 18 EKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
++LP +A+H+++ S+FS+YG V YVS+PKFK+T K+KGFAFVEF T E A K L
Sbjct: 150 QRLPSDADHEWLSSLFSEYGPVAYVSIPKFKATQKIKGFAFVEFETPEGAKKCL 203
>gi|407261198|ref|XP_003946189.1| PREDICTED: la-related protein 7 [Mus musculus]
gi|407263138|ref|XP_003945433.1| PREDICTED: la-related protein 7 [Mus musculus]
Length = 318
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 41/60 (68%)
Query: 18 EKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLNP 77
E LP H +IE VF K G V Y+S+P +KSTG KGFAFVEF TKE+A KA+E NP
Sbjct: 15 ELLPKNVTHSWIERVFGKCGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIEFLNNP 74
>gi|410907089|ref|XP_003967024.1| PREDICTED: la-related protein 7-like [Takifugu rubripes]
Length = 519
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 37/69 (53%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
R V E LP + H +IE VF+K G V YVS+P++KS+G KGFAFVEF +EEA +A+E
Sbjct: 118 RTVYVELLPKDVTHGWIERVFAKCGTVVYVSVPRYKSSGDPKGFAFVEFEKEEEARQAIE 177
Query: 73 LGLNPCPTD 81
+ NP P D
Sbjct: 178 VLNNP-PED 185
>gi|41053963|ref|NP_956224.1| la-related protein 7 [Danio rerio]
gi|82241469|sp|Q7ZWE3.1|LARP7_DANRE RecName: Full=La-related protein 7; AltName: Full=La
ribonucleoprotein domain family member 7
gi|29436467|gb|AAH49455.1| Zgc:56476 [Danio rerio]
Length = 555
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 47/70 (67%), Gaps = 1/70 (1%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
R V E LP H ++E VFSK G V Y+S+P++KST KGFAFVEF T+E+A KA+
Sbjct: 132 SRTVYVELLPKTVTHIWLERVFSKCGHVVYISIPRYKSTRHSKGFAFVEFETQEQAQKAV 191
Query: 72 ELGLNPCPTD 81
E+ NP P D
Sbjct: 192 EMLNNP-PED 200
>gi|355699025|gb|AES00992.1| La ribonucleoprotein domain family, member 7 [Mustela putorius
furo]
Length = 86
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 41/60 (68%)
Query: 18 EKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLNP 77
E LP H +IE VF K G V Y+S+P +KSTG KGFAFVEF TKE+A KA+E NP
Sbjct: 1 ELLPKNVNHSWIERVFGKCGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIEFLNNP 60
>gi|340727580|ref|XP_003402119.1| PREDICTED: LOW QUALITY PROTEIN: la-related protein 7-like [Bombus
terrestris]
Length = 597
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 31/58 (53%), Positives = 45/58 (77%)
Query: 15 VLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
V + LPP+A+H+ + S+FS+YG+V YVS+P+FK+ K+KGFAFVEF+T E A L+
Sbjct: 142 VYVQNLPPDADHETLSSIFSQYGQVVYVSIPRFKNNKKIKGFAFVEFNTIESAKNCLK 199
>gi|158296988|ref|XP_317298.4| AGAP008164-PA [Anopheles gambiae str. PEST]
gi|157014978|gb|EAA12381.4| AGAP008164-PA [Anopheles gambiae str. PEST]
Length = 559
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 41/54 (75%)
Query: 18 EKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
E LPP+A+HD++ +VFS YG V YVSLPKF+++GK+K F FVEF + KAL
Sbjct: 125 ESLPPKADHDWVRNVFSSYGTVAYVSLPKFRNSGKIKEFGFVEFDEEASVQKAL 178
>gi|148688487|gb|EDL20434.1| mCG1033211 [Mus musculus]
Length = 126
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 42/64 (65%)
Query: 14 VVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALEL 73
+V E LP H + E VF K G V Y+S+P +KSTG KGFAFVEF TKE+A KA+E
Sbjct: 1 MVYVELLPKNVTHSWFERVFGKCGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIEF 60
Query: 74 GLNP 77
NP
Sbjct: 61 LNNP 64
>gi|307212601|gb|EFN88316.1| La-related protein 7 [Harpegnathos saltator]
Length = 625
Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 33/61 (54%), Positives = 45/61 (73%), Gaps = 3/61 (4%)
Query: 15 VLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFST---KEEATKAL 71
V + LPP+++HD++ S FSKYGKV YVS+P+++S K+KGFAFVEF T EE KA
Sbjct: 140 VYVQNLPPDSDHDWLISAFSKYGKVVYVSIPRYQSNKKIKGFAFVEFDTPAGAEECIKAF 199
Query: 72 E 72
+
Sbjct: 200 Q 200
>gi|260837431|ref|XP_002613707.1| hypothetical protein BRAFLDRAFT_271338 [Branchiostoma floridae]
gi|229299096|gb|EEN69716.1| hypothetical protein BRAFLDRAFT_271338 [Branchiostoma floridae]
Length = 231
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 52/77 (67%), Gaps = 3/77 (3%)
Query: 1 MAELVENNKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVE 60
+AE V+ ++ R V E LP H++I++ FS GKV Y+SLP+FK++G KGFAF+E
Sbjct: 113 LAEPVQMDE---RTVYVECLPRTVTHEWIKTTFSVCGKVAYISLPRFKTSGDTKGFAFIE 169
Query: 61 FSTKEEATKALELGLNP 77
F +EEA KA ++ NP
Sbjct: 170 FEKQEEAEKACKMLNNP 186
>gi|387914200|gb|AFK10709.1| La protein-like protein [Callorhinchus milii]
Length = 196
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
R V E LP H +I+ VFSK G V YVS+P++K++G KGFAFVEF T +A KA+E
Sbjct: 117 RTVYVELLPKNVSHGWIDRVFSKCGNVVYVSIPRYKTSGDPKGFAFVEFETITQAQKAIE 176
Query: 73 LGLNPCPTD 81
+ NP P D
Sbjct: 177 VLNNP-PED 184
>gi|291235177|ref|XP_002737523.1| PREDICTED: La autoantigen-like [Saccoglossus kowalevskii]
Length = 709
Score = 70.1 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/67 (50%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 15 VLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELG 74
V E LP H+++++VF YG VTYVS+P++K+TG +KGFAF+EFST +EA A +
Sbjct: 151 VYAECLPSNTSHEWLKTVFDAYGTVTYVSIPRYKTTGDIKGFAFIEFSTPQEAQLACKKL 210
Query: 75 LNPCPTD 81
NP P D
Sbjct: 211 NNP-PDD 216
>gi|346469135|gb|AEO34412.1| hypothetical protein [Amblyomma maculatum]
Length = 476
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 44/55 (80%)
Query: 18 EKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
E+LPP A+H +++ VFS++G+V YVSLP+++ ++KGFAF+EF+T E+ +A +
Sbjct: 88 ERLPPHADHAWLKGVFSRHGQVVYVSLPRYRHNNRIKGFAFIEFATAEDVDRACQ 142
>gi|441675980|ref|XP_003272651.2| PREDICTED: la-related protein 7-like [Nomascus leucogenys]
Length = 310
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 40/60 (66%)
Query: 18 EKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLNP 77
E LP H +IE VF K G V Y+S+P +KS G KGFAFVEF TKE+A KA+E NP
Sbjct: 31 ELLPKNVNHSWIERVFGKCGNVFYISIPHYKSIGDPKGFAFVEFETKEQAAKAIEFLNNP 90
>gi|350412122|ref|XP_003489548.1| PREDICTED: la-related protein 7-like [Bombus impatiens]
Length = 595
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 30/58 (51%), Positives = 43/58 (74%)
Query: 15 VLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
V + LPP+ +H+ + S+FS+YG+V YVS+P+FK+ K+KGFAFVEF T E A L+
Sbjct: 142 VYVQNLPPDTDHETLSSIFSQYGQVVYVSIPRFKNNKKIKGFAFVEFDTIESAKNCLK 199
>gi|328790716|ref|XP_001120336.2| PREDICTED: la-related protein 7-like [Apis mellifera]
Length = 624
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 28/58 (48%), Positives = 44/58 (75%)
Query: 15 VLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
V + LPP+++H+ + S+FS+YG+V Y+S+P+FK+ K+KGFAFVEF + A K L+
Sbjct: 142 VYVQNLPPDSDHETLSSIFSQYGQVVYISIPRFKNNKKIKGFAFVEFDIPQSAKKCLK 199
>gi|321453772|gb|EFX64977.1| hypothetical protein DAPPUDRAFT_333645 [Daphnia pulex]
Length = 200
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/57 (57%), Positives = 41/57 (71%)
Query: 15 VLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
V E+LPP A ++I S+FS+YG V YVSLPKFK ++KGFAFVEF E A KA+
Sbjct: 85 VYVERLPPHASIEWITSIFSEYGVVAYVSLPKFKDVTRIKGFAFVEFCDPESAAKAV 141
>gi|47213526|emb|CAF96679.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1719
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 34/65 (52%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 17 KEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLN 76
+E LP + H +IE VFS+ G V YVS+P++KS+G KGFAFVEF EEA +A++ LN
Sbjct: 1264 QELLPKDVTHGWIERVFSQCGTVVYVSVPRYKSSGDSKGFAFVEFEKAEEAREAIQ-ALN 1322
Query: 77 PCPTD 81
P D
Sbjct: 1323 NPPQD 1327
>gi|322795732|gb|EFZ18411.1| hypothetical protein SINV_08003 [Solenopsis invicta]
Length = 764
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 30/55 (54%), Positives = 43/55 (78%)
Query: 18 EKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+ LPP+A+H+++ SVFSKYG V YVS+P++K+ K+KGFAFVEF T A + L+
Sbjct: 145 QNLPPDADHEWLISVFSKYGTVDYVSIPRYKNNRKIKGFAFVEFDTPNHAQECLK 199
>gi|380025220|ref|XP_003696375.1| PREDICTED: la-related protein 7-like [Apis florea]
Length = 609
Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 28/58 (48%), Positives = 44/58 (75%)
Query: 15 VLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
V + LPP+++H+ + S+FS+YG+V Y+S+P+FK+ K+KGFAFVEF + A K L+
Sbjct: 142 VYVQNLPPDSDHETLSSIFSQYGQVVYISIPRFKNNKKIKGFAFVEFDIPQSAKKCLK 199
>gi|241997842|ref|XP_002433564.1| lupus La ribonucleoprotein, putative [Ixodes scapularis]
gi|215495323|gb|EEC04964.1| lupus La ribonucleoprotein, putative [Ixodes scapularis]
Length = 531
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 44/55 (80%)
Query: 18 EKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
E++P A+H+++++ FSK+G+V YVSLP+++ GK+KGFAFVEFS+ EE K +
Sbjct: 108 ERIPLNADHNWLKTAFSKHGQVLYVSLPRYRHNGKIKGFAFVEFSSPEEVDKVCQ 162
>gi|321445150|gb|EFX60609.1| hypothetical protein DAPPUDRAFT_342412 [Daphnia pulex]
Length = 260
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 40/54 (74%)
Query: 18 EKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
E+LPP A ++I S+FS+YG V YVSLPKFK ++KGFAFVEF E A KA+
Sbjct: 52 ERLPPHASIEWITSIFSEYGVVAYVSLPKFKDVTRIKGFAFVEFCDPESAAKAV 105
>gi|449662539|ref|XP_002159561.2| PREDICTED: uncharacterized protein LOC100199382 [Hydra
magnipapillata]
Length = 514
Score = 68.2 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 29/58 (50%), Positives = 45/58 (77%)
Query: 16 LKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALEL 73
L+E+ P + +HD+++ +FSK G V Y+SLP+ K K+KGFAF+EFST++EA KA ++
Sbjct: 82 LQEQFPNDIDHDWLKEIFSKCGTVEYISLPRHKHNNKVKGFAFIEFSTQQEAEKACQM 139
>gi|332026973|gb|EGI67069.1| La-related protein 7 [Acromyrmex echinatior]
Length = 835
Score = 67.8 bits (164), Expect = 8e-10, Method: Composition-based stats.
Identities = 31/57 (54%), Positives = 43/57 (75%), Gaps = 3/57 (5%)
Query: 18 EKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEF---STKEEATKAL 71
+ LPP+A+HD++ S+FSKYG V YVS+P+++S K+KGFAFVEF S+ EE K
Sbjct: 141 QNLPPDADHDWLISIFSKYGLVEYVSIPRYRSNRKIKGFAFVEFDKPSSAEECIKTF 197
>gi|350592276|ref|XP_003359081.2| PREDICTED: la-related protein 7-like [Sus scrofa]
Length = 288
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 51/85 (60%), Gaps = 5/85 (5%)
Query: 1 MAELVENNKKYG----RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGF 56
+AEL+ + KK R + E LP H + E VF K V Y+S+P++KSTG KGF
Sbjct: 17 LAELLSHGKKQKKERKRSLYVELLPKNVNHSWTERVFGKCENVAYISIPRYKSTGDPKGF 76
Query: 57 AFVEFSTKEEATKALELGLNPCPTD 81
AFV+F TK +A KAL+ LN P +
Sbjct: 77 AFVKFETKAQAAKALQF-LNNLPEE 100
>gi|189235300|ref|XP_974730.2| PREDICTED: similar to multi-sex-combs [Tribolium castaneum]
gi|270004171|gb|EFA00619.1| hypothetical protein TcasGA2_TC003495 [Tribolium castaneum]
Length = 504
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 41/54 (75%)
Query: 18 EKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
E+L +A H+++ SVFS++G V YVS+PK+K+ +KGFAFVEF ++EA AL
Sbjct: 120 ERLKSDATHEWLNSVFSEFGNVVYVSIPKYKNNSAIKGFAFVEFEKEKEAQNAL 173
>gi|405962787|gb|EKC28430.1| La-related protein 7 [Crassostrea gigas]
Length = 584
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 41/60 (68%)
Query: 18 EKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLNP 77
E LP A+H ++ +FS G +TY+S+PKFKS+G KGFAFVEF + E A +A + NP
Sbjct: 91 ECLPKTADHQWLRKLFSPCGNITYISIPKFKSSGDKKGFAFVEFDSVEAAKRACQELNNP 150
>gi|427789395|gb|JAA60149.1| Hypothetical protein [Rhipicephalus pulchellus]
Length = 492
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 42/53 (79%)
Query: 18 EKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKA 70
E+LP A+H +++ VFS++G+V YVSLP+++ ++KGFAF+EF++ E+ +A
Sbjct: 88 ERLPLHADHAWLKGVFSRHGQVVYVSLPRYRHNNRIKGFAFIEFASPEDVDRA 140
>gi|321468019|gb|EFX79006.1| hypothetical protein DAPPUDRAFT_319946 [Daphnia pulex]
Length = 533
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/51 (58%), Positives = 37/51 (72%)
Query: 15 VLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKE 65
V E+LPP A ++I S+FS+YG V YVSLPKFK ++KGFAFVEF E
Sbjct: 157 VYVERLPPHASIEWITSIFSEYGVVAYVSLPKFKDATRIKGFAFVEFCDPE 207
>gi|195393552|ref|XP_002055418.1| GJ19358 [Drosophila virilis]
gi|194149928|gb|EDW65619.1| GJ19358 [Drosophila virilis]
Length = 620
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/55 (52%), Positives = 37/55 (67%)
Query: 18 EKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
E LP A HD+++ VFS+YG VTYVSLP + T K+K FAF+EF KAL+
Sbjct: 152 EALPSTATHDWLKEVFSRYGPVTYVSLPHYPGTRKIKEFAFIEFEKSSSVEKALK 206
>gi|357625823|gb|EHJ76129.1| putative multi-sex-combs protein [Danaus plexippus]
Length = 500
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 42/59 (71%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
R + E +P A ++++ VFS YG+V Y+SLPKFK++ K KGFAF+EF++ ++A +
Sbjct: 117 RTIYVESIPVTASLNWLDRVFSDYGQVAYISLPKFKNSQKNKGFAFIEFASPQDAQNCI 175
>gi|195447920|ref|XP_002071429.1| GK25140 [Drosophila willistoni]
gi|194167514|gb|EDW82415.1| GK25140 [Drosophila willistoni]
Length = 633
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 28/60 (46%), Positives = 38/60 (63%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
R + E LP A HD+++ VFS+YG V YVSLP + T K+K FAF+EF KA++
Sbjct: 157 RTLYVEALPANASHDWLKEVFSRYGPVAYVSLPHYPGTKKIKEFAFIEFERTASLEKAIK 216
>gi|196001131|ref|XP_002110433.1| hypothetical protein TRIADDRAFT_54426 [Trichoplax adhaerens]
gi|190586384|gb|EDV26437.1| hypothetical protein TRIADDRAFT_54426 [Trichoplax adhaerens]
Length = 482
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 39/58 (67%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKA 70
R + E +P +H+++ F K+G++ YVS+PK+KSTG KGFAFVE+ E A KA
Sbjct: 125 RTIYVEVIPKRVDHEWVRKHFDKFGEILYVSIPKYKSTGDNKGFAFVEYKDPENAQKA 182
>gi|195042868|ref|XP_001991510.1| GH12028 [Drosophila grimshawi]
gi|193901268|gb|EDW00135.1| GH12028 [Drosophila grimshawi]
Length = 620
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 37/55 (67%)
Query: 18 EKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
E LP A HD+++ VFS+YG V+YVSLP + T K+K FAF+EF KA++
Sbjct: 146 EALPATATHDWLKEVFSRYGPVSYVSLPHYPGTRKIKEFAFIEFEKSGSVEKAIK 200
>gi|198468011|ref|XP_001354583.2| GA11366 [Drosophila pseudoobscura pseudoobscura]
gi|198146211|gb|EAL31637.2| GA11366 [Drosophila pseudoobscura pseudoobscura]
Length = 626
Score = 60.1 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/57 (52%), Positives = 38/57 (66%), Gaps = 3/57 (5%)
Query: 18 EKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEF---STKEEATKAL 71
E LP A HD+++ VFS+YG V YVSLP + T K+K FAF+EF S E+A KA
Sbjct: 152 EALPANASHDWLKEVFSRYGPVAYVSLPHYPGTKKIKEFAFIEFERSSALEKAVKAF 208
>gi|428170641|gb|EKX39564.1| hypothetical protein GUITHDRAFT_114292 [Guillardia theta CCMP2712]
Length = 321
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 39/63 (61%), Gaps = 4/63 (6%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKST----GKLKGFAFVEFSTKEEAT 68
R + E + P + H+ I S SK+GKV YVSLP+FK GK KGF FVEF EEA
Sbjct: 126 RTIYVEGIAPSSTHEEISSFMSKWGKVCYVSLPRFKDQDGNPGKTKGFCFVEFEHVEEAK 185
Query: 69 KAL 71
KA+
Sbjct: 186 KAV 188
>gi|194769392|ref|XP_001966788.1| GF19208 [Drosophila ananassae]
gi|190618309|gb|EDV33833.1| GF19208 [Drosophila ananassae]
Length = 607
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 39/56 (69%), Gaps = 3/56 (5%)
Query: 18 EKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEF---STKEEATKA 70
E LP A HD+++ VFS+YG V YVSLP + T K+K FAF+EF S+ E+A KA
Sbjct: 159 EALPANANHDWLKEVFSRYGPVAYVSLPHYPGTKKIKEFAFIEFEKSSSVEKAVKA 214
>gi|330928516|ref|XP_003302299.1| hypothetical protein PTT_14050 [Pyrenophora teres f. teres 0-1]
gi|311322459|gb|EFQ89618.1| hypothetical protein PTT_14050 [Pyrenophora teres f. teres 0-1]
Length = 403
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 38/50 (76%)
Query: 23 EAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
E ++ I+ VF++YG +T VSLP + TG LKGF +V+FS+++EAT ALE
Sbjct: 329 ECSNESIQEVFAEYGSITRVSLPTDRDTGALKGFGYVDFSSQQEATAALE 378
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 26/46 (56%)
Query: 25 EHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKA 70
+ D++ F +G++ + + TG+ KGF +VEFS +A KA
Sbjct: 229 DEDWLRREFEGFGEIVGCRVITDRETGRAKGFGYVEFSNAADAAKA 274
>gi|325186857|emb|CCA21403.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 249
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 5 VENNKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTK 64
V+++ R + +K + +HD + + S++GKVT VSLP+F ST KGF FVEF
Sbjct: 92 VKDDTSLDRTIYIDKFYRDHDHDSLRKLLSQFGKVTLVSLPRFDSTRHFKGFGFVEFENP 151
Query: 65 EEATKALELGLNPCPTDYQSSI 86
E A +A+ +N + Q+ I
Sbjct: 152 EAAREAMR-AINQRHKNDQNGI 172
>gi|189203851|ref|XP_001938261.1| nuclear localization sequence-binding protein [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187985360|gb|EDU50848.1| nuclear localization sequence-binding protein [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 475
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 38/50 (76%)
Query: 23 EAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
E ++ I+ VF++YG +T VSLP + TG LKGF +V+FS+++EAT ALE
Sbjct: 333 ECSNESIQEVFAEYGSITRVSLPTDRDTGALKGFGYVDFSSQQEATAALE 382
>gi|195135011|ref|XP_002011929.1| GI14301 [Drosophila mojavensis]
gi|193909183|gb|EDW08050.1| GI14301 [Drosophila mojavensis]
Length = 613
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 35/54 (64%)
Query: 18 EKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
E LP A HD+++ VF +YG V+YVSLP + T K+K FAF+EF KAL
Sbjct: 147 EALPATATHDWLKEVFGRYGTVSYVSLPHYPGTRKIKEFAFIEFEKSSSVEKAL 200
>gi|194890572|ref|XP_001977343.1| GG18304 [Drosophila erecta]
gi|190648992|gb|EDV46270.1| GG18304 [Drosophila erecta]
Length = 595
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 35/54 (64%)
Query: 18 EKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
E LP A HD+++ VFS+YG V YVSLP + T K+K FAF+EF KAL
Sbjct: 152 EALPANATHDWLKEVFSRYGPVAYVSLPHYPGTKKIKEFAFIEFEKSGSVEKAL 205
>gi|195481641|ref|XP_002101720.1| mxc [Drosophila yakuba]
gi|194189244|gb|EDX02828.1| mxc [Drosophila yakuba]
Length = 595
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 35/54 (64%)
Query: 18 EKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
E LP A HD+++ VFS+YG V YVSLP + T K+K FAF+EF KAL
Sbjct: 152 EALPANATHDWLKEVFSRYGPVAYVSLPHYPGTKKIKEFAFIEFEKSGSVEKAL 205
>gi|396471523|ref|XP_003838892.1| hypothetical protein LEMA_P025650.1 [Leptosphaeria maculans JN3]
gi|312215461|emb|CBX95413.1| hypothetical protein LEMA_P025650.1 [Leptosphaeria maculans JN3]
Length = 490
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 36/47 (76%)
Query: 26 HDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+D I+ +F++YG +T VSLP + TG +KGF +V+F ++EEAT AL+
Sbjct: 350 NDSIQEIFAEYGNITRVSLPTDRDTGSIKGFGYVDFGSQEEATAALD 396
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Query: 25 EHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL------ELGLNPC 78
+ D++ F +G++ + + TG+ KGF +VEF+T +A KA EL P
Sbjct: 246 DEDWLRREFEGFGEIVGCRIITDRETGRGKGFGYVEFATSADAAKAQAEMHQYELDGRPL 305
Query: 79 PTDYQS 84
D+ +
Sbjct: 306 NVDFST 311
>gi|186685885|ref|YP_001869081.1| RNP-1 like RNA-binding protein [Nostoc punctiforme PCC 73102]
gi|186468337|gb|ACC84138.1| RNP-1 like RNA-binding protein [Nostoc punctiforme PCC 73102]
Length = 109
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 37/53 (69%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
L E D + +VF++YG V V LP + TG+L+GFAFVE S+++E TKA+E
Sbjct: 8 LSYEVTQDALSTVFAEYGSVKRVQLPTDRETGRLRGFAFVEMSSEDEETKAIE 60
>gi|24640787|ref|NP_524795.2| La related protein 7 [Drosophila melanogaster]
gi|7291035|gb|AAF46473.1| La related protein 7 [Drosophila melanogaster]
gi|16768872|gb|AAL28655.1| LD09531p [Drosophila melanogaster]
gi|220953504|gb|ACL89295.1| mxc-PA [synthetic construct]
Length = 595
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 32/44 (72%)
Query: 18 EKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEF 61
E LP A HD+++ VFS+YG V YVSLP + T K+K FAF+EF
Sbjct: 152 EALPANATHDWLKEVFSRYGPVAYVSLPHYPGTKKIKEFAFIEF 195
>gi|6746602|gb|AAF27644.1| La autoantigen-like 2 [Drosophila melanogaster]
Length = 595
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 32/44 (72%)
Query: 18 EKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEF 61
E LP A HD+++ VFS+YG V YVSLP + T K+K FAF+EF
Sbjct: 152 EALPANATHDWLKEVFSRYGPVAYVSLPHYPGTKKIKEFAFIEF 195
>gi|326431875|gb|EGD77445.1| hypothetical protein PTSG_08541 [Salpingoeca sp. ATCC 50818]
Length = 761
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 38/51 (74%), Gaps = 1/51 (1%)
Query: 18 EKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAT 68
EKLP EHD I ++FS++G + Y+SLP++ + K KGFAF+EF+T EA+
Sbjct: 160 EKLPEAFEHDDINALFSRFGTIEYISLPRWPNR-KHKGFAFIEFATPLEAS 209
>gi|425434339|ref|ZP_18814808.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC
9432]
gi|425450077|ref|ZP_18829909.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC
7941]
gi|440751641|ref|ZP_20930844.1| RNA recognition motif family protein [Microcystis aeruginosa
TAIHU98]
gi|389676192|emb|CCH94745.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC
9432]
gi|389769258|emb|CCI05857.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC
7941]
gi|440176134|gb|ELP55407.1| RNA recognition motif family protein [Microcystis aeruginosa
TAIHU98]
Length = 97
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 34/52 (65%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
LP E + D + VF +YGK+ V LP + TGK +GFAFVE T EE TKA+
Sbjct: 8 LPFEVDQDDVVEVFKEYGKIKRVHLPMDRETGKKRGFAFVEMETPEEETKAI 59
>gi|452001822|gb|EMD94281.1| hypothetical protein COCHEDRAFT_1094167 [Cochliobolus
heterostrophus C5]
Length = 501
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 36/47 (76%)
Query: 26 HDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
++ I+ VF++YG VT VSLP + +G LKGF +V+F ++EEAT ALE
Sbjct: 361 NETIQEVFAEYGNVTRVSLPTDRDSGALKGFGYVDFGSQEEATAALE 407
>gi|451850002|gb|EMD63305.1| hypothetical protein COCSADRAFT_161812 [Cochliobolus sativus
ND90Pr]
Length = 489
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 36/47 (76%)
Query: 26 HDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
++ I+ VF++YG VT VSLP + +G LKGF +V+F ++EEAT ALE
Sbjct: 348 NETIQEVFAEYGNVTRVSLPTDRDSGALKGFGYVDFGSQEEATAALE 394
>gi|425461447|ref|ZP_18840925.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC
9808]
gi|389825682|emb|CCI24355.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC
9808]
Length = 97
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 34/52 (65%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
LP E + D + VF +YGK+ V LP + TGK +GFAFVE T EE TKA+
Sbjct: 8 LPFEVDQDDVVEVFKEYGKIKRVHLPMDRETGKKRGFAFVEMETPEEETKAI 59
>gi|358387438|gb|EHK25033.1| hypothetical protein TRIVIDRAFT_54648 [Trichoderma virens Gv29-8]
Length = 1024
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/59 (47%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKA 70
GR V L P A D I +FSKYG ++ +++P+ +GK +GFAFV+F+TK+EA KA
Sbjct: 757 GREVHVSGLSPSATEDEIREIFSKYGTISRINVPR-NISGKGRGFAFVDFATKDEAEKA 814
>gi|360043471|emb|CCD78884.1| putative lupus la ribonucleoprotein [Schistosoma mansoni]
Length = 592
Score = 56.2 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 23/46 (50%), Positives = 35/46 (76%)
Query: 27 DYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
D+I +VF +YG+V +VSLP++ + L+GFAFVEF T + A KA++
Sbjct: 151 DWIRNVFEEYGEVLFVSLPRYHHSNSLRGFAFVEFRTSKSARKAVK 196
>gi|169623995|ref|XP_001805404.1| hypothetical protein SNOG_15247 [Phaeosphaeria nodorum SN15]
gi|111056352|gb|EAT77472.1| hypothetical protein SNOG_15247 [Phaeosphaeria nodorum SN15]
Length = 451
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 35/50 (70%)
Query: 23 EAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+ ++ I+ +F +YG +T VSLP + TG LKGF +V+F T EEAT ALE
Sbjct: 308 DCSNEGIQEIFQEYGNITRVSLPTDRDTGSLKGFGYVDFGTVEEATAALE 357
>gi|256074055|ref|XP_002573342.1| lupus la ribonucleoprotein [Schistosoma mansoni]
Length = 444
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 23/46 (50%), Positives = 35/46 (76%)
Query: 27 DYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
D+I +VF +YG+V +VSLP++ + L+GFAFVEF T + A KA++
Sbjct: 151 DWIRNVFEEYGEVLFVSLPRYHHSNSLRGFAFVEFRTSKSARKAVK 196
>gi|157117115|ref|XP_001658707.1| lupus la protein (Sjogren syndrome type B antigen) (La/SS-B),
putative [Aedes aegypti]
gi|108876198|gb|EAT40423.1| AAEL007853-PA [Aedes aegypti]
Length = 537
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/37 (64%), Positives = 31/37 (83%)
Query: 18 EKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLK 54
E LPP+A+HD++ +VFS YGKV YVSLPKFK + K+K
Sbjct: 129 ECLPPKADHDWVRNVFSAYGKVAYVSLPKFKYSKKIK 165
>gi|226479200|emb|CAX73095.1| La-related protein 7 [Schistosoma japonicum]
Length = 590
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 22/46 (47%), Positives = 34/46 (73%)
Query: 27 DYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
D+I ++F +YG+V YVSLP++ + +GFAFVEF T + A KA++
Sbjct: 151 DWIRNMFDEYGEVLYVSLPRYHRSNSFRGFAFVEFKTSKSARKAVK 196
>gi|302914164|ref|XP_003051083.1| hypothetical protein NECHADRAFT_10800 [Nectria haematococca mpVI
77-13-4]
gi|256732021|gb|EEU45370.1| hypothetical protein NECHADRAFT_10800 [Nectria haematococca mpVI
77-13-4]
Length = 1061
Score = 55.1 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 37/79 (46%), Positives = 47/79 (59%), Gaps = 4/79 (5%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
GR V L A ++ VFSKYGKVT V +P+ S GK KGFAF++F TKEEA KA+
Sbjct: 767 GREVHISNLDRTASEADLKGVFSKYGKVTRVKVPQTLS-GKNKGFAFIDFETKEEAEKAV 825
Query: 72 ELGLNPCPTDYQSSILTTT 90
N T ++S IL +
Sbjct: 826 AEMDN---TKFRSQILEVS 841
>gi|358253471|dbj|GAA53141.1| La-related protein 7 [Clonorchis sinensis]
Length = 641
Score = 55.1 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 21/46 (45%), Positives = 37/46 (80%)
Query: 27 DYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
D++ +FS+YG+V Y+SLP++ ++G +GFAFVEF+T ++A A++
Sbjct: 190 DWLRDIFSEYGEVLYISLPQYHTSGFFRGFAFVEFATPKQARLAVK 235
>gi|342878966|gb|EGU80243.1| hypothetical protein FOXB_09170 [Fusarium oxysporum Fo5176]
Length = 1079
Score = 54.7 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 35/76 (46%), Positives = 46/76 (60%), Gaps = 4/76 (5%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
GR + L A ++ VFSKYG VT V+LP+ GK KGFAF++F+TKEEA KA+
Sbjct: 767 GREIHISNLDRTATEADLKEVFSKYGNVTRVNLPR-NLVGKTKGFAFIDFATKEEAEKAV 825
Query: 72 ELGLNPCPTDYQSSIL 87
N T ++S IL
Sbjct: 826 AEMNN---TKFKSQIL 838
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 12/82 (14%)
Query: 2 AELVENNKKYGRVVLKEKL-----------PPEAEHDYIESVFSKYGKVTYVSLPKFKST 50
+ L+ + K +G+ L KL PP A+ YI +F G++ + LP K
Sbjct: 655 SALLRDGKYFGQSQLTVKLGNDLTVYVANYPPAADQKYIRDLFKDCGEILSIRLPSLKVD 714
Query: 51 GKLKGFAFVEFSTKEEATKALE 72
+ + F +V F +E + KA++
Sbjct: 715 ARRR-FCYVSFRDQEASAKAVK 735
>gi|158339748|ref|YP_001520755.1| RNA-binding protein [Acaryochloris marina MBIC11017]
gi|158340644|ref|YP_001521812.1| RNA-binding protein [Acaryochloris marina MBIC11017]
gi|158309989|gb|ABW31605.1| RNA-binding protein [Acaryochloris marina MBIC11017]
gi|158310885|gb|ABW32498.1| RNA-binding protein [Acaryochloris marina MBIC11017]
Length = 95
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 36/54 (66%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
L + D I++VF++YG V+ V +PK + TG+++GFAFVE E +KA+E
Sbjct: 7 NLSYDVTQDEIQAVFAEYGAVSNVHVPKDRETGRMRGFAFVELGNDAEESKAIE 60
>gi|422304104|ref|ZP_16391453.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC
9806]
gi|389790787|emb|CCI13324.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC
9806]
Length = 97
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 33/52 (63%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
LP E + D + VF +YGK+ V LP + TGK +GFAFVE T EE KA+
Sbjct: 8 LPFEVDQDDVVEVFKEYGKIKRVHLPMDRETGKKRGFAFVEMETPEEEAKAI 59
>gi|76154703|gb|AAX26134.2| SJCHGC08042 protein [Schistosoma japonicum]
Length = 227
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 34/46 (73%)
Query: 27 DYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
D+I ++F +YG+V YVSLP++ + +GFAFVEF T + A KA++
Sbjct: 139 DWIRNMFEEYGEVLYVSLPRYHRSNSFRGFAFVEFKTSKSARKAVK 184
>gi|158340529|ref|YP_001521523.1| RNA-binding protein [Acaryochloris marina MBIC11017]
gi|158310770|gb|ABW32384.1| RNA-binding protein [Acaryochloris marina MBIC11017]
Length = 91
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 35/53 (66%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
L E + + ++FS+YG+VT V LPK + TGKL+GFAFV+ + KA+E
Sbjct: 8 LSYEVAQEDLRAIFSEYGEVTNVHLPKDRETGKLRGFAFVDLGNDADEVKAIE 60
>gi|348690259|gb|EGZ30073.1| hypothetical protein PHYSODRAFT_353726 [Phytophthora sojae]
Length = 201
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 32/46 (69%)
Query: 25 EHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKA 70
+HD + F+K+GKV VS+P+F + K KGF FVEF+ ++ A KA
Sbjct: 50 DHDSLRRTFTKFGKVNLVSMPRFPQSKKFKGFGFVEFAEQDSAEKA 95
>gi|301093259|ref|XP_002997478.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262110734|gb|EEY68786.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 265
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 37/62 (59%)
Query: 3 ELVENNKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFS 62
++ ++++ R + + EHD + F+K+GKV VSLP+F + K KGF FVEFS
Sbjct: 90 QVGQDHEADARTIYIDSFSAADEHDSLRRTFAKFGKVNLVSLPRFAQSKKFKGFGFVEFS 149
Query: 63 TK 64
+
Sbjct: 150 ER 151
>gi|440684828|ref|YP_007159623.1| RNP-1 like RNA-binding protein [Anabaena cylindrica PCC 7122]
gi|428681947|gb|AFZ60713.1| RNP-1 like RNA-binding protein [Anabaena cylindrica PCC 7122]
Length = 102
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 33/53 (62%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
L E D + +VF++YG V V LP + TGKL+GF FVE T EE T A++
Sbjct: 8 LSYEVTQDNLTAVFAEYGSVKRVQLPTDRETGKLRGFGFVEMGTDEEETTAID 60
>gi|298492825|ref|YP_003723002.1| RNP-1 like RNA-binding protein ['Nostoc azollae' 0708]
gi|298234743|gb|ADI65879.1| RNP-1 like RNA-binding protein ['Nostoc azollae' 0708]
Length = 101
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 34/47 (72%)
Query: 26 HDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
D ++ F++YGKV+ V LP + TG+L+GFAFVE T+++ T A+E
Sbjct: 14 EDDLKQAFAEYGKVSRVQLPTDRETGRLRGFAFVEMETEDQETAAIE 60
>gi|428203801|ref|YP_007082390.1| RRM domain-containing RNA-binding protein [Pleurocapsa sp. PCC
7327]
gi|427981233|gb|AFY78833.1| RRM domain-containing RNA-binding protein [Pleurocapsa sp. PCC
7327]
Length = 99
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 34/53 (64%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
LP E D ++ VF+ YG V V LP + TG+++GFAFVE T+ E T A++
Sbjct: 8 LPYEVSEDDLKQVFADYGTVKSVRLPMDRETGRVRGFAFVEMDTEAEETAAIQ 60
>gi|427417658|ref|ZP_18907841.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
7375]
gi|425760371|gb|EKV01224.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
7375]
Length = 98
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 32/44 (72%)
Query: 29 IESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
IE VF +YG+V VSLP + +G+ +GFAFVE + KE+ KA+E
Sbjct: 17 IEEVFKEYGRVNRVSLPMDRESGRPRGFAFVEMAAKEDEAKAIE 60
>gi|389585900|dbj|GAB68630.1| RNA binding protein [Plasmodium cynomolgi strain B]
Length = 111
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
G +++ + EA DYI+ VF KYG++ + L + TG LKG+AF+EF +A +A+
Sbjct: 8 GWIIIITNIHGEARDDYIKDVFEKYGQIKNLHLNLDRRTGFLKGYAFLEFENFVDAKRAI 67
Query: 72 E----LGLNPCPT 80
+ L N C
Sbjct: 68 DGKNVLHKNACDV 80
>gi|119511522|ref|ZP_01630631.1| RNA-binding region protein [Nodularia spumigena CCY9414]
gi|119463833|gb|EAW44761.1| RNA-binding region protein [Nodularia spumigena CCY9414]
Length = 102
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 33/53 (62%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
L E D + +VF++YG V V LP + TG+L+GF FVE T +E T A+E
Sbjct: 8 LSYEVTQDTLSAVFAEYGSVKRVQLPTNRETGQLRGFGFVEMGTDDEETAAIE 60
>gi|427710388|ref|YP_007052765.1| RNP-1 like RNA-binding protein [Nostoc sp. PCC 7107]
gi|427362893|gb|AFY45615.1| RNP-1 like RNA-binding protein [Nostoc sp. PCC 7107]
Length = 106
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 34/54 (62%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
L E D + SVF++YG V + +P + TG+L+GFAFVE S+ E T A++
Sbjct: 7 NLSYEVTQDALNSVFAEYGSVKRIQIPTDRETGRLRGFAFVEMSSDAEETAAID 60
>gi|443324398|ref|ZP_21053165.1| RRM domain-containing RNA-binding protein [Xenococcus sp. PCC
7305]
gi|442795980|gb|ELS05312.1| RRM domain-containing RNA-binding protein [Xenococcus sp. PCC
7305]
Length = 90
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 34/47 (72%)
Query: 25 EHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
E + +E VFS+YGKVT V LP + +G+ +GFAFVE S+K+E A+
Sbjct: 13 EKEDLEEVFSEYGKVTRVHLPTDRESGRKRGFAFVEMSSKDEENAAI 59
>gi|443328295|ref|ZP_21056895.1| RRM domain-containing RNA-binding protein [Xenococcus sp. PCC
7305]
gi|442792141|gb|ELS01628.1| RRM domain-containing RNA-binding protein [Xenococcus sp. PCC
7305]
Length = 96
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 35/53 (66%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
L E + IE VF++YG + V LP + TG+ +GFAFVE S++ E TKA+E
Sbjct: 8 LSYEVTKEDIEEVFNEYGTIKRVHLPTDRETGRFRGFAFVEMSSEAEETKAIE 60
>gi|428309319|ref|YP_007120296.1| RRM domain-containing RNA-binding protein [Microcoleus sp. PCC
7113]
gi|428250931|gb|AFZ16890.1| RRM domain-containing RNA-binding protein [Microcoleus sp. PCC
7113]
Length = 101
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 31/44 (70%)
Query: 29 IESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
I VF++YG V V+LPK + TG+ +GFAFVE T EE T A+E
Sbjct: 17 IREVFAEYGTVNNVTLPKDRETGRKRGFAFVEMGTDEEETAAIE 60
>gi|298492453|ref|YP_003722630.1| RNP-1 like RNA-binding protein ['Nostoc azollae' 0708]
gi|298234371|gb|ADI65507.1| RNP-1 like RNA-binding protein ['Nostoc azollae' 0708]
Length = 102
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 33/54 (61%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
L E D + +VF++YG V V LP + TGKL+GF FVE T+ E T A+E
Sbjct: 7 NLSYEVTQDTLSAVFAEYGSVRRVQLPTDRETGKLRGFGFVEMGTEAEETTAIE 60
>gi|440793396|gb|ELR14581.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 964
Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/64 (45%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 9 KKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAT 68
K+ GR++++ LP +A + F+ +GK+ V +PK K TG +GF FVEF TKEEA
Sbjct: 282 KRDGRLIIR-NLPFQATEADLSEKFAAHGKLVDVIIPKNKETGNPRGFGFVEFFTKEEAA 340
Query: 69 KALE 72
ALE
Sbjct: 341 NALE 344
Score = 35.0 bits (79), Expect = 6.1, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 32/60 (53%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
G + LP A + + F+++G++ Y +L K K TG +G AF++F+ K A L
Sbjct: 491 GTTLFIRNLPFGATVQDLRAKFAEFGRIRYCALVKDKVTGMARGSAFLQFAEKASADSLL 550
>gi|255084900|ref|XP_002504881.1| predicted protein [Micromonas sp. RCC299]
gi|226520150|gb|ACO66139.1| predicted protein [Micromonas sp. RCC299]
Length = 85
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 35/56 (62%)
Query: 15 VLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKA 70
+L +LPP+A + +E FSKYGKV V +P+ T + KG AFV+F EEA A
Sbjct: 2 LLVRQLPPDARAEELEEAFSKYGKVIDVYIPRDYYTKRPKGIAFVQFPNPEEAADA 57
>gi|198457351|ref|XP_002136255.1| GA27853 [Drosophila pseudoobscura pseudoobscura]
gi|198142561|gb|EDY71294.1| GA27853 [Drosophila pseudoobscura pseudoobscura]
Length = 641
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 30/76 (39%), Positives = 46/76 (60%), Gaps = 6/76 (7%)
Query: 2 AELVENNKKYGRVVLKEKLPPEAE---HDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAF 58
++L+E ++ +V K K+P + + ++ VFS+YG V YVSLP + T K+K FAF
Sbjct: 54 SQLLELDESALKVRRKTKMPDQRDVNDKTLLKEVFSRYGPVAYVSLPHYPGTKKIKEFAF 113
Query: 59 VEF---STKEEATKAL 71
+EF S E+A KA
Sbjct: 114 IEFERSSALEKAVKAF 129
>gi|434396627|ref|YP_007130631.1| RNP-1 like RNA-binding protein [Stanieria cyanosphaera PCC 7437]
gi|428267724|gb|AFZ33665.1| RNP-1 like RNA-binding protein [Stanieria cyanosphaera PCC 7437]
Length = 102
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 35/54 (64%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+P E + + S+F++YG VT V LP + TG+++GF FVE S + E +A+E
Sbjct: 7 NIPYEVTQEDLSSIFAEYGTVTRVYLPVDRETGRMRGFGFVEMSNETEEDQAIE 60
>gi|411119198|ref|ZP_11391578.1| RRM domain-containing RNA-binding protein [Oscillatoriales
cyanobacterium JSC-12]
gi|410711061|gb|EKQ68568.1| RRM domain-containing RNA-binding protein [Oscillatoriales
cyanobacterium JSC-12]
Length = 104
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Query: 25 EHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
E D +E+ FS+YGKV V LPK + TG+++GFAFVE S++ E A++
Sbjct: 14 EDDLVET-FSEYGKVVSVQLPKDRETGRMRGFAFVEMSSETEEAAAID 60
>gi|358394186|gb|EHK43587.1| hypothetical protein TRIATDRAFT_85620 [Trichoderma atroviride IMI
206040]
Length = 1057
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKA 70
GR V L P D I +FSKYG + +++P+ GK +GFAF++F TK++A KA
Sbjct: 759 GREVHVSGLGPSTTEDEIREIFSKYGTIARINVPR-SDNGKGRGFAFIDFETKDQAEKA 816
>gi|443708578|gb|ELU03655.1| hypothetical protein CAPTEDRAFT_219142 [Capitella teleta]
Length = 774
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 40/69 (57%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
GR + L E+E + + +FS+ G V Y + K TGK +G FV++S+KE+A K L
Sbjct: 374 GRTLFVRNLSFESEEEDMYELFSELGDVVYCRITMNKETGKSRGTGFVQYSSKEDADKCL 433
Query: 72 ELGLNPCPT 80
E+ +P P
Sbjct: 434 EVANDPGPN 442
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 10 KYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLP--KFKSTGKLKGFAFVEFSTKEEA 67
K R++++ L + D + F K+GK+ V +P K+ +KGFAFV+F T EEA
Sbjct: 147 KVSRIIVRN-LSFKCTEDILREKFQKFGKILEVKIPLKGDKAKNTMKGFAFVQFETVEEA 205
Query: 68 TKALELG 74
ALE+
Sbjct: 206 QAALEMN 212
>gi|254424446|ref|ZP_05038164.1| RNA-binding protein, putative [Synechococcus sp. PCC 7335]
gi|196191935|gb|EDX86899.1| RNA-binding protein, putative [Synechococcus sp. PCC 7335]
Length = 84
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 32/47 (68%)
Query: 26 HDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
D + SVF +YG V V+LP + TG+++GFAFV+ S+ EE A+E
Sbjct: 14 QDDLNSVFGEYGTVKRVTLPTDRETGRVRGFAFVDLSSDEEEQAAIE 60
>gi|427417097|ref|ZP_18907280.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
7375]
gi|425759810|gb|EKV00663.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
7375]
Length = 91
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
L +A + I +VF++YG V V LP + TG+ +GFAFVE S+++E T A+E
Sbjct: 7 NLSYDATQEDINAVFAEYGTVQRVHLPTDRETGRPRGFAFVEMSSEDEETSAIE 60
>gi|170040084|ref|XP_001847842.1| multi-sex-combs [Culex quinquefasciatus]
gi|167863654|gb|EDS27037.1| multi-sex-combs [Culex quinquefasciatus]
Length = 546
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 30/37 (81%)
Query: 18 EKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLK 54
E LPP+A+H+++ +VFS YGKV YVSLP FK + K+K
Sbjct: 152 ESLPPKADHEWVRNVFSAYGKVVYVSLPTFKYSKKIK 188
>gi|220910060|ref|YP_002485371.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7425]
gi|219866671|gb|ACL47010.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7425]
Length = 99
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Query: 25 EHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
++D I++ F++YG V V LP + TG+L+GFAFVE ST +E T A+E
Sbjct: 14 QNDLIQA-FTEYGSVKSVHLPTDRETGRLRGFAFVEMSTSDEETAAIE 60
>gi|198457333|ref|XP_002136250.1| GA27845 [Drosophila pseudoobscura pseudoobscura]
gi|198142556|gb|EDY71289.1| GA27845 [Drosophila pseudoobscura pseudoobscura]
Length = 510
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 30/76 (39%), Positives = 46/76 (60%), Gaps = 6/76 (7%)
Query: 2 AELVENNKKYGRVVLKEKLPPEAE---HDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAF 58
++L+E ++ +V K K+P + + ++ VFS+YG V YVSLP + T K+K FAF
Sbjct: 54 SQLLELDESALKVRRKTKMPDQRDVNDKTLLKEVFSRYGPVAYVSLPHYPGTKKIKEFAF 113
Query: 59 VEF---STKEEATKAL 71
+EF S E+A KA
Sbjct: 114 IEFERSSALEKAVKAF 129
>gi|307152307|ref|YP_003887691.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7822]
gi|306982535|gb|ADN14416.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7822]
Length = 116
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 34/53 (64%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
LP + D I+ VF +YG V V LP + +G+++GFAFV+ + E TKA+E
Sbjct: 8 LPYQVTQDDIKEVFGEYGTVKQVKLPIDRESGRVRGFAFVDLDSDAEETKAIE 60
>gi|312376823|gb|EFR23805.1| hypothetical protein AND_12216 [Anopheles darlingi]
Length = 590
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 44/69 (63%)
Query: 3 ELVENNKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFS 62
E VE + E LPP+A+ D++ +VFS YGKV YVSLP+FK + K+K F FVEF
Sbjct: 107 EFVERENSEDCTLYVESLPPKADLDWVRNVFSSYGKVAYVSLPRFKFSKKIKEFGFVEFE 166
Query: 63 TKEEATKAL 71
+ +KAL
Sbjct: 167 EEASVSKAL 175
>gi|389629168|ref|XP_003712237.1| polyadenylate-binding protein [Magnaporthe oryzae 70-15]
gi|158514092|sp|A4QUF0.1|PABP_MAGO7 RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|351644569|gb|EHA52430.1| polyadenylate-binding protein [Magnaporthe oryzae 70-15]
gi|440469069|gb|ELQ38192.1| polyadenylate-binding protein [Magnaporthe oryzae Y34]
gi|440487573|gb|ELQ67355.1| polyadenylate-binding protein [Magnaporthe oryzae P131]
Length = 762
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 36/55 (65%)
Query: 18 EKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+ + PE D ++F KYG VT SL + + TGK +GF FV F++ E+A+KA++
Sbjct: 247 KNINPEVTDDEFRTLFEKYGDVTSSSLARDQETGKSRGFGFVNFTSHEDASKAVQ 301
>gi|166367328|ref|YP_001659601.1| RNA-binding region protein [Microcystis aeruginosa NIES-843]
gi|425440525|ref|ZP_18820825.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC
9717]
gi|166089701|dbj|BAG04409.1| RNA-binding region protein [Microcystis aeruginosa NIES-843]
gi|389719028|emb|CCH97091.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC
9717]
Length = 100
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 33/46 (71%)
Query: 27 DYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
D ++ VF++YG V+ V LP + TGK++GF FVE S+ EE KA+E
Sbjct: 15 DDLKEVFAEYGTVSRVYLPVDRETGKMRGFGFVEMSSDEEEAKAIE 60
>gi|428214973|ref|YP_007088117.1| RRM domain-containing RNA-binding protein [Oscillatoria acuminata
PCC 6304]
gi|428003354|gb|AFY84197.1| RRM domain-containing RNA-binding protein [Oscillatoria acuminata
PCC 6304]
Length = 106
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 36/54 (66%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
L E + + +VF++YG V V+LP + TG+++GFAFVE +T+ E T A+E
Sbjct: 7 NLSYEVTQEDLNAVFAEYGSVKRVNLPTDRETGRVRGFAFVEMATETEETAAIE 60
>gi|428308134|ref|YP_007144959.1| RNP-1 like RNA-binding protein [Crinalium epipsammum PCC 9333]
gi|428249669|gb|AFZ15449.1| RNP-1 like RNA-binding protein [Crinalium epipsammum PCC 9333]
Length = 113
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 34/54 (62%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
L E D + SVF++YG V V+LP + TG+ +GFAFVE T+++ A+E
Sbjct: 7 NLSYEVTEDDLNSVFAEYGTVKRVNLPNDRETGRPRGFAFVEMQTEDQENAAIE 60
>gi|411119813|ref|ZP_11392189.1| RRM domain-containing RNA-binding protein [Oscillatoriales
cyanobacterium JSC-12]
gi|410709969|gb|EKQ67480.1| RRM domain-containing RNA-binding protein [Oscillatoriales
cyanobacterium JSC-12]
Length = 90
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 33/49 (67%)
Query: 23 EAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
+AE + I VFS+YGKV+ VSLP + TG+ +GFAFV+ + E A+
Sbjct: 11 QAEEEDIREVFSEYGKVSRVSLPTDRETGRKRGFAFVDMESDAEEDAAI 59
>gi|422303993|ref|ZP_16391342.1| putative RNA-binding protein rbpB [Microcystis aeruginosa PCC
9806]
gi|425468337|ref|ZP_18847364.1| putative RNA-binding protein rbpB [Microcystis aeruginosa PCC
9701]
gi|389790955|emb|CCI13203.1| putative RNA-binding protein rbpB [Microcystis aeruginosa PCC
9806]
gi|389885016|emb|CCI34745.1| putative RNA-binding protein rbpB [Microcystis aeruginosa PCC
9701]
Length = 100
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 33/46 (71%)
Query: 27 DYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
D ++ VF++YG V+ V LP + TGK++GF FVE S+ EE KA+E
Sbjct: 15 DDLKEVFAEYGTVSRVYLPVDRETGKMRGFGFVEMSSDEEEAKAIE 60
>gi|298490358|ref|YP_003720535.1| RNP-1 like RNA-binding protein ['Nostoc azollae' 0708]
gi|298232276|gb|ADI63412.1| RNP-1 like RNA-binding protein ['Nostoc azollae' 0708]
Length = 111
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 33/53 (62%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
L E D + VF++YG V V +P + TG+++GFAFVE S+ E T A+E
Sbjct: 8 LSYEVTQDALTQVFAEYGSVKRVQIPTDRETGRVRGFAFVEMSSDAEETAAIE 60
>gi|434389333|ref|YP_007099944.1| RRM domain-containing RNA-binding protein [Chamaesiphon minutus
PCC 6605]
gi|428020323|gb|AFY96417.1| RRM domain-containing RNA-binding protein [Chamaesiphon minutus
PCC 6605]
Length = 93
Score = 51.2 bits (121), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 32/53 (60%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
L E D + F++YGKV V LP + TG+L+GFAFVE T E + A+E
Sbjct: 8 LSYEVTQDDLTQTFAEYGKVKRVQLPTDRETGRLRGFAFVEMETDAEESAAIE 60
>gi|307155022|ref|YP_003890406.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7822]
gi|306985250|gb|ADN17131.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7822]
Length = 109
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 33/53 (62%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
L E E + VF++YG V V LP+ + TGK +GF FVE ST +E KA+E
Sbjct: 8 LHYEVEEGELREVFAEYGTVRRVYLPEDRETGKKRGFGFVEMSTDDEEDKAIE 60
>gi|282896133|ref|ZP_06304159.1| RNA-binding region protein RNP-1 [Raphidiopsis brookii D9]
gi|281199051|gb|EFA73926.1| RNA-binding region protein RNP-1 [Raphidiopsis brookii D9]
Length = 98
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 36/53 (67%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
L E D + +VFS+YG+V V +P + TG+++GFAFVE +++ + T A+E
Sbjct: 8 LSYEVTQDALTAVFSEYGEVKRVQIPTDRETGRVRGFAFVEMNSEAQETAAIE 60
>gi|126660986|ref|ZP_01732073.1| RNA-binding region RNP-1 [Cyanothece sp. CCY0110]
gi|126617726|gb|EAZ88508.1| RNA-binding region RNP-1 [Cyanothece sp. CCY0110]
Length = 81
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 32/44 (72%)
Query: 29 IESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+ +VFS YG V V +P + TG+ +GFAFVE +T+EE +KA+E
Sbjct: 17 LNTVFSDYGSVKRVHIPTDRETGRPRGFAFVEMNTEEEESKAIE 60
>gi|440684571|ref|YP_007159366.1| putative transcriptional regulator [Anabaena cylindrica PCC 7122]
gi|428681690|gb|AFZ60456.1| putative transcriptional regulator [Anabaena cylindrica PCC 7122]
Length = 604
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLNPC 78
A+ +E++FS++G+++ V LPK + TGK +GFA VEF E A KALE NP
Sbjct: 536 ADEQDLETLFSQFGEISDVYLPKDRMTGKSRGFAIVEFEQLESAKKALE-NTNPL 589
>gi|427720688|ref|YP_007068682.1| RNP-1 like RNA-binding protein [Calothrix sp. PCC 7507]
gi|427353124|gb|AFY35848.1| RNP-1 like RNA-binding protein [Calothrix sp. PCC 7507]
Length = 99
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 31/54 (57%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
L E D + VF++YG V V LP + TG+++GF FVE T E T A+E
Sbjct: 7 NLSYEVTQDGLSGVFAEYGSVKRVQLPTDRDTGRVRGFGFVEMGTDAEETAAIE 60
>gi|156102392|ref|XP_001616889.1| RNA binding protein [Plasmodium vivax Sal-1]
gi|148805763|gb|EDL47162.1| RNA binding protein, putative [Plasmodium vivax]
Length = 119
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 38/61 (62%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
G +++ + EA DYI+ VF KYG++ + L + TG LKG+AF+EF +A +A+
Sbjct: 34 GWIIIITNIHGEARDDYIKDVFEKYGQIKNLHLNLDRRTGFLKGYAFLEFENFVDAKRAI 93
Query: 72 E 72
+
Sbjct: 94 D 94
>gi|328850756|gb|EGF99917.1| hypothetical protein MELLADRAFT_118186 [Melampsora larici-populina
98AG31]
Length = 667
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 34/55 (61%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELG 74
LP A D + FS+YG + V LP T ++KGF +VEF+T+E AT A+ +G
Sbjct: 508 LPFSATQDSVYEAFSEYGDINSVRLPTDPETERIKGFGYVEFATQEAATAAVNVG 562
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 31/48 (64%)
Query: 25 EHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+ D+++ F K+G+V + + T + KGF +V+F++ E+A KA+E
Sbjct: 413 DDDWLKKEFEKFGEVISARVITERGTERSKGFGYVDFASPEDARKAVE 460
>gi|254432360|ref|ZP_05046063.1| RNA-binding protein RbpD [Cyanobium sp. PCC 7001]
gi|197626813|gb|EDY39372.1| RNA-binding protein RbpD [Cyanobium sp. PCC 7001]
Length = 105
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 36/54 (66%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
L +AE D ++ +FS+YG V +LP + TG+ +GFAFVE + + + TKA++
Sbjct: 7 NLSFDAEVDDVQHLFSEYGDVRKCTLPLDRDTGRKRGFAFVEMANEADETKAID 60
>gi|425434353|ref|ZP_18814822.1| putative RNA-binding protein rbpA [Microcystis aeruginosa PCC
9432]
gi|425450092|ref|ZP_18829924.1| putative RNA-binding protein rbpA [Microcystis aeruginosa PCC
7941]
gi|389676152|emb|CCH94759.1| putative RNA-binding protein rbpA [Microcystis aeruginosa PCC
9432]
gi|389769241|emb|CCI05872.1| putative RNA-binding protein rbpA [Microcystis aeruginosa PCC
7941]
Length = 100
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 32/44 (72%)
Query: 29 IESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
++ VF++YG V+ V LP + TGK++GF FVE S+ EE KA+E
Sbjct: 17 LQEVFAEYGTVSRVYLPVDRETGKMRGFGFVEMSSDEEEAKAIE 60
>gi|218438077|ref|YP_002376406.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7424]
gi|218170805|gb|ACK69538.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7424]
Length = 96
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTK-EEATKALEL 73
LP E E +I VF+ YG+V V +P + TG+ +GFAFVE T+ +EA+ EL
Sbjct: 8 LPFEVEEKHINDVFADYGQVKRVYMPVDRETGRRRGFAFVEMETQSQEASAIAEL 62
>gi|67605110|ref|XP_666661.1| cutinase negative acting protein [Cryptosporidium hominis TU502]
gi|54657695|gb|EAL36429.1| cutinase negative acting protein [Cryptosporidium hominis]
Length = 475
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/63 (39%), Positives = 39/63 (61%)
Query: 11 YGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKA 70
YG V+ +P ++ + I+S F+ G V VS+P++ TGK++GFA VEF E+ A
Sbjct: 354 YGPSVIVRNIPFSSDDESIKSFFNGCGVVKRVSIPRYSDTGKMRGFAMVEFENDEQIQNA 413
Query: 71 LEL 73
L+L
Sbjct: 414 LKL 416
>gi|425455329|ref|ZP_18835049.1| putative RNA-binding protein rbpB [Microcystis aeruginosa PCC
9807]
gi|389803795|emb|CCI17308.1| putative RNA-binding protein rbpB [Microcystis aeruginosa PCC
9807]
Length = 100
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 35/53 (66%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
L E + ++ VF++YG V V LP ++TGK++GF FVE S+ EE KA+E
Sbjct: 8 LVYEVTKEDLQGVFAEYGTVVRVYLPVDQATGKMRGFGFVEMSSDEEEAKAIE 60
>gi|221060574|ref|XP_002260932.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
gi|193811006|emb|CAQ42904.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
Length = 123
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 37/61 (60%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
G +++ + EA DYI VF KYG++ + L + TG LKG+AF+EF +A +A+
Sbjct: 22 GWIIIITNIHGEARDDYIRDVFEKYGQIKNLHLNLDRRTGFLKGYAFLEFENFVDAKRAI 81
Query: 72 E 72
+
Sbjct: 82 D 82
>gi|427709160|ref|YP_007051537.1| RNP-1 like RNA-binding protein [Nostoc sp. PCC 7107]
gi|427361665|gb|AFY44387.1| RNP-1 like RNA-binding protein [Nostoc sp. PCC 7107]
Length = 99
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 32/54 (59%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
L E D + +VF++YG V + LP + TG+++GF FVE T E T A+E
Sbjct: 7 NLSYEVTEDSLSAVFAEYGSVKRIQLPTDRETGRMRGFGFVEMGTDAEETSAIE 60
>gi|443654715|ref|ZP_21131411.1| RNA recognition motiffamily protein [Microcystis aeruginosa
DIANCHI905]
gi|159026915|emb|CAO89166.1| rbpF/A2 [Microcystis aeruginosa PCC 7806]
gi|443333703|gb|ELS48246.1| RNA recognition motiffamily protein [Microcystis aeruginosa
DIANCHI905]
Length = 100
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 32/44 (72%)
Query: 29 IESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
++ VF++YG V+ V LP + TGK++GF FVE S+ EE KA+E
Sbjct: 17 LQEVFAEYGTVSRVYLPVDRETGKMRGFGFVEMSSDEEEAKAIE 60
>gi|301095902|ref|XP_002897050.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262108479|gb|EEY66531.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 286
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 35/58 (60%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKA 70
R V ++LP E E D I + G +T V LP + T KLKGF +VEFS+++EA A
Sbjct: 163 RTVYIKQLPYEVEEDTIRQALASCGTITSVRLPIWNHTKKLKGFGYVEFSSEDEALAA 220
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%)
Query: 6 ENNKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKE 65
E ++K V E +P +A I + FS G V V +P+++ +GK +G+A V F +
Sbjct: 55 EIDRKTEATVYVEGIPYKASEGDIVTHFSSCGTVREVRMPRYQDSGKPRGYAHVVFDDEA 114
Query: 66 EATKALEL 73
KALEL
Sbjct: 115 ALEKALEL 122
>gi|308803152|ref|XP_003078889.1| putative small nuclear ribonucleoprotein (ISS) [Ostreococcus tauri]
gi|116057342|emb|CAL51769.1| putative small nuclear ribonucleoprotein (ISS) [Ostreococcus tauri]
Length = 269
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 37/61 (60%)
Query: 15 VLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELG 74
VL L +A D + F+ YG + V +PK + TG+ +G AFV+++T+ EA A++ G
Sbjct: 46 VLVRNLSWDAREDDVRDRFAGYGNILDVYMPKDRETGRPRGLAFVKYATQSEADAAVDGG 105
Query: 75 L 75
+
Sbjct: 106 V 106
>gi|307591599|ref|YP_003900398.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7822]
gi|306986453|gb|ADN18332.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7822]
Length = 109
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 31/52 (59%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
L E E ++ VFS YGKVT V +P + TG+ +GFAFVE T E A+
Sbjct: 8 LAFEVEDKHLSEVFSDYGKVTRVHIPTDRETGQRRGFAFVEMETAEMEDAAI 59
>gi|119486604|ref|ZP_01620654.1| RNA-binding region [Lyngbya sp. PCC 8106]
gi|119456221|gb|EAW37353.1| RNA-binding region [Lyngbya sp. PCC 8106]
Length = 100
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 32/54 (59%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
L E D ++SVF+ YG V V +P + TG+ +GFAFVE T E T A+E
Sbjct: 7 NLAYEVTEDDLKSVFTDYGSVKRVHIPTDRETGRSRGFAFVEMDTDSEETSAIE 60
>gi|16330189|ref|NP_440917.1| RNA-binding protein [Synechocystis sp. PCC 6803]
gi|383321932|ref|YP_005382785.1| RNA-binding protein [Synechocystis sp. PCC 6803 substr. GT-I]
gi|383325101|ref|YP_005385954.1| RNA-binding protein [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|383490985|ref|YP_005408661.1| RNA-binding protein [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|384436252|ref|YP_005650976.1| RNA-binding protein [Synechocystis sp. PCC 6803]
gi|451814348|ref|YP_007450800.1| RNA-binding protein [Synechocystis sp. PCC 6803]
gi|1652677|dbj|BAA17597.1| RNA-binding protein [Synechocystis sp. PCC 6803]
gi|339273284|dbj|BAK49771.1| RNA-binding protein [Synechocystis sp. PCC 6803]
gi|359271251|dbj|BAL28770.1| RNA-binding protein [Synechocystis sp. PCC 6803 substr. GT-I]
gi|359274421|dbj|BAL31939.1| RNA-binding protein [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|359277591|dbj|BAL35108.1| RNA-binding protein [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|407958098|dbj|BAM51338.1| RNA-binding protein [Synechocystis sp. PCC 6803]
gi|451780317|gb|AGF51286.1| RNA-binding protein [Synechocystis sp. PCC 6803]
Length = 83
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 23 EAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+A D + +VFS+YG V V LP + TG+++GF FVE S+ +E A+E
Sbjct: 11 QATEDDVLTVFSEYGTVKRVQLPTDRETGRMRGFGFVEMSSDKEEDAAIE 60
>gi|209882003|ref|XP_002142439.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209558045|gb|EEA08090.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 1078
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%)
Query: 11 YGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKA 70
+G V+ +P ++ I+S FS G V VS+P++ TGK++GFA VE E+
Sbjct: 963 FGPSVIVRNIPFSSDESSIKSFFSNCGNVRRVSIPRYSDTGKMRGFAMVEMENDEQIQNV 1022
Query: 71 LELG 74
L+L
Sbjct: 1023 LKLS 1026
>gi|407038416|gb|EKE39116.1| RNA-binding protein TIA-1, putative [Entamoeba nuttalli P19]
Length = 306
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 32/54 (59%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALEL 73
L PE D + F K+G+VT + KF TGK KG+ FV F KE+A A+++
Sbjct: 136 LQPEVNDDLLYKTFQKFGRVTDARVLKFTQTGKSKGYGFVTFIRKEDAETAMQM 189
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 6/52 (11%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
+P E D ++ + ++YG + V L K KG+AF++FS E AT A+
Sbjct: 239 IPKNVESDDLKQLLAEYGSIEEVRL------NKDKGYAFIKFSKHESATSAI 284
>gi|326517876|dbj|BAK07190.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 345
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 35/53 (66%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
LPP A+ D ++ FS+YG V V + + TG+ +GFAFVEF+ +E A AL+
Sbjct: 13 LPPSAQQDELKDHFSRYGDVLCVRVVRDWETGQGRGFAFVEFADEEGAHAALQ 65
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 28/46 (60%)
Query: 27 DYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
++++S F K+G +T V + + T + +GF F+ F + E +K LE
Sbjct: 150 EHLQSYFEKFGNITDVVVIREGGTQRSRGFGFITFDSDEAMSKVLE 195
>gi|75906353|ref|YP_320649.1| RNA-binding region RNP-1 [Anabaena variabilis ATCC 29413]
gi|75700078|gb|ABA19754.1| RNA-binding region RNP-1 [Anabaena variabilis ATCC 29413]
Length = 103
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLN 76
L E + I +VF++YG V V LP + TG+L+GFAFVE + E T A+E GL+
Sbjct: 8 LSYEVTQEDISNVFAEYGSVKRVVLPTDRETGRLRGFAFVEMGSDAEETAAIE-GLD 63
>gi|17229803|ref|NP_486351.1| RNA-binding protein [Nostoc sp. PCC 7120]
gi|81859085|sp|Q9WX39.3|RBPF_NOSS1 RecName: Full=Putative RNA-binding protein RbpF
gi|4850345|dbj|BAA77713.1| RNA binding protein [Anabaena variabilis]
gi|17131403|dbj|BAB74010.1| RNA-binding protein [Nostoc sp. PCC 7120]
Length = 105
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLN 76
L E + I +VF++YG V V LP + TG+L+GFAFVE + E T A+E GL+
Sbjct: 8 LSYEVTQEDISNVFAEYGSVKRVVLPTDRETGRLRGFAFVEMGSDAEETAAIE-GLD 63
>gi|340516569|gb|EGR46817.1| predicted protein [Trichoderma reesei QM6a]
Length = 1062
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/59 (45%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKA 70
GR V L P D + VFSKYG + V++P+ G+ +GFAFV F TK+EA KA
Sbjct: 758 GREVHVSGLNPSTSEDELRDVFSKYGTIQRVNIPR-SINGRGRGFAFVVFGTKDEAEKA 815
>gi|354566485|ref|ZP_08985657.1| RNP-1 like RNA-binding protein [Fischerella sp. JSC-11]
gi|353545501|gb|EHC14952.1| RNP-1 like RNA-binding protein [Fischerella sp. JSC-11]
Length = 99
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 32/54 (59%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
L E D + +VF++YG V V LP + TG ++GF FVE ST E T A+E
Sbjct: 7 NLSYEVTEDSLNAVFAEYGSVKRVQLPTDRETGHVRGFGFVEMSTDAEETAAIE 60
>gi|67465872|ref|XP_649094.1| RNA-binding protein TIA-1 [Entamoeba histolytica HM-1:IMSS]
gi|56465456|gb|EAL43711.1| RNA-binding protein TIA-1, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449705857|gb|EMD45818.1| RNA-binding protein TIA-1, putative [Entamoeba histolytica KU27]
Length = 306
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 32/54 (59%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALEL 73
L PE D + F K+G+VT + KF TGK KG+ FV F KE+A A+++
Sbjct: 136 LQPEVNDDLLYKTFQKFGRVTDARVLKFTQTGKSKGYGFVTFIRKEDAETAMQM 189
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 6/52 (11%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
+P E D ++ + ++YG + V L K KG+AF++FS E AT A+
Sbjct: 239 IPKNVESDDLKQLLAEYGSIEEVRL------NKDKGYAFIKFSKHESATSAI 284
>gi|452848411|gb|EME50343.1| hypothetical protein DOTSEDRAFT_69017 [Dothistroma septosporum
NZE10]
Length = 516
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 31/50 (62%)
Query: 23 EAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+A D + VF +YG + V LP + TG KGF +VEFS+ EEA A+E
Sbjct: 371 DATQDMVTEVFQEYGSINAVRLPTDRETGAPKGFGYVEFSSIEEAKSAME 420
Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 30/48 (62%)
Query: 25 EHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+ +++ F ++G + V + + +G+ KG+ +VEF + ++A KALE
Sbjct: 265 DEEWLTREFEEFGAIKAVRVITDRDSGRSKGYGYVEFESADDAAKALE 312
>gi|452825487|gb|EME32483.1| RNA-binding protein [Galdieria sulphuraria]
Length = 523
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 35/52 (67%)
Query: 23 EAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELG 74
+ D + FS++GKVT V L + K TG++ G+AFV F +EEA KA++LG
Sbjct: 187 DINEDILLDAFSRFGKVTAVDLKRDKYTGEILGYAFVYFVQEEEAQKAMKLG 238
>gi|194477264|ref|YP_002049443.1| RNA-binding protein RbpD [Paulinella chromatophora]
gi|171192271|gb|ACB43233.1| RNA-binding protein RbpD [Paulinella chromatophora]
Length = 132
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 36/50 (72%)
Query: 23 EAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+AE + ++ +F++YG V+ VSLP + TG+ +GFAFVE + + + KA++
Sbjct: 11 DAEQEDLQGLFAQYGDVSKVSLPLDRETGRKRGFAFVEMANEADEQKAID 60
>gi|167391953|ref|XP_001739964.1| nucleolysin TIAR [Entamoeba dispar SAW760]
gi|165896141|gb|EDR23641.1| nucleolysin TIAR, putative [Entamoeba dispar SAW760]
Length = 306
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 32/54 (59%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALEL 73
L PE D + F K+G+VT + KF TGK KG+ FV F KE+A A+++
Sbjct: 136 LQPEVNDDLLYKTFQKFGRVTDARVLKFTQTGKSKGYGFVTFIRKEDAETAMQM 189
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 6/52 (11%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
+P E D ++ + ++YG + V L K KG+AF++FS E AT A+
Sbjct: 239 IPKNVESDDLKQLLAEYGSIEEVRL------NKDKGYAFIKFSKHESATSAI 284
>gi|307154466|ref|YP_003889850.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7822]
gi|306984694|gb|ADN16575.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7822]
Length = 98
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 30/52 (57%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
LP E E ++ VFS YGKV V LP + TG +GFAFVE T E A+
Sbjct: 8 LPHEVEDKHLSEVFSDYGKVNRVYLPTDRETGLRRGFAFVEMETPEMEDAAI 59
>gi|87301157|ref|ZP_01083998.1| RNA-binding protein RbpD [Synechococcus sp. WH 5701]
gi|87284125|gb|EAQ76078.1| RNA-binding protein RbpD [Synechococcus sp. WH 5701]
Length = 113
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 33/50 (66%)
Query: 23 EAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+AE + + +FS+YG+V SLP + TG+ +GFAFVE + E KA++
Sbjct: 11 DAEQEDLRDLFSQYGEVRQCSLPLDRETGRKRGFAFVELANDAEEQKAID 60
>gi|171912058|ref|ZP_02927528.1| RNA-binding region RNP-1 [Verrucomicrobium spinosum DSM 4136]
Length = 150
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 34/52 (65%), Gaps = 2/52 (3%)
Query: 25 EHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLN 76
E D + +FS+YG VT VSLP + TG+ +GFAFV TKE A++ GLN
Sbjct: 16 EQD-VRELFSQYGAVTEVSLPTDRDTGRPRGFAFVAMDTKEAMDAAIK-GLN 65
>gi|451995810|gb|EMD88278.1| hypothetical protein COCHEDRAFT_1197317 [Cochliobolus
heterostrophus C5]
Length = 282
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
AE + +FS+YG VT V L K + TG+ KGFAFV ++ + +A KA E
Sbjct: 214 AEEQDLRDMFSRYGHVTRVFLAKDRETGRAKGFAFVSYADRSDAAKACE 262
>gi|189210555|ref|XP_001941609.1| translation initiation factor eIF3g [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187977702|gb|EDU44328.1| translation initiation factor eIF3g [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 283
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
AE + +FS+YG VT V L K + TG+ KGFAFV ++ + +A KA E
Sbjct: 215 AEEQDLRDMFSRYGHVTRVFLAKDRETGRAKGFAFVSYADRSDAAKACE 263
>gi|330937139|ref|XP_003305556.1| hypothetical protein PTT_18431 [Pyrenophora teres f. teres 0-1]
gi|311317390|gb|EFQ86366.1| hypothetical protein PTT_18431 [Pyrenophora teres f. teres 0-1]
Length = 283
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
AE + +FS+YG VT V L K + TG+ KGFAFV ++ + +A KA E
Sbjct: 215 AEEQDLRDMFSRYGHVTRVFLAKDRETGRAKGFAFVSYADRSDAAKACE 263
>gi|451851414|gb|EMD64712.1| hypothetical protein COCSADRAFT_25710 [Cochliobolus sativus ND90Pr]
Length = 282
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
AE + +FS+YG VT V L K + TG+ KGFAFV ++ + +A KA E
Sbjct: 214 AEEQDLRDMFSRYGHVTRVFLAKDRETGRAKGFAFVSYADRSDAAKACE 262
>gi|296425387|ref|XP_002842223.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638484|emb|CAZ86414.1| unnamed protein product [Tuber melanosporum]
Length = 1133
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
GR V + +A + ++ +F KYG++ V LP G KG+ FV FS KEEA A+
Sbjct: 836 GREVYIRNIDFQAHDNDVQELFQKYGRIEKVRLPPGPKKGTHKGYGFVTFSAKEEALAAV 895
Query: 72 ELGLNPCPTDYQSSILT 88
E G N Y++ I++
Sbjct: 896 E-GANNTQLKYRTLIIS 911
Score = 34.3 bits (77), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALEL 73
PP A+ I +F G++ + P K + F +V+F++ +EA KA L
Sbjct: 753 FPPTADETCIRDLFKDCGEIVDIRFPSLKYNSHRR-FCYVQFASSDEAQKATSL 805
>gi|327405345|ref|YP_004346183.1| RNP-1 like RNA-binding protein [Fluviicola taffensis DSM 16823]
gi|327320853|gb|AEA45345.1| RNP-1 like RNA-binding protein [Fluviicola taffensis DSM 16823]
Length = 224
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 33/47 (70%)
Query: 26 HDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+ ++S+F YGKV V++ K + TGK +GFAFVE + + EA KA+E
Sbjct: 15 EEQLKSLFEDYGKVNRVTIAKDRETGKPRGFAFVEMADESEADKAIE 61
>gi|427731365|ref|YP_007077602.1| RRM domain-containing RNA-binding protein [Nostoc sp. PCC 7524]
gi|427367284|gb|AFY50005.1| RRM domain-containing RNA-binding protein [Nostoc sp. PCC 7524]
Length = 100
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 33/54 (61%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
L + D + +VF++YG V V LP + TG+++GF FVE S+ E T A+E
Sbjct: 7 NLSYDVTEDSLNAVFAEYGSVKRVQLPTDRETGRVRGFGFVEMSSDAEETAAIE 60
>gi|396458891|ref|XP_003834058.1| similar to eukaryotic translation initiation factor 3 subunit G
[Leptosphaeria maculans JN3]
gi|312210607|emb|CBX90693.1| similar to eukaryotic translation initiation factor 3 subunit G
[Leptosphaeria maculans JN3]
Length = 282
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
AE + +FS+YG VT V L K + TG+ KGFAFV ++ + +A KA E
Sbjct: 214 AEEQDLRDMFSRYGHVTRVFLAKDRETGRAKGFAFVSYADRTDAAKACE 262
>gi|169618950|ref|XP_001802888.1| hypothetical protein SNOG_12667 [Phaeosphaeria nodorum SN15]
gi|224488071|sp|Q0U6E7.2|EIF3G_PHANO RecName: Full=Eukaryotic translation initiation factor 3 subunit G;
Short=eIF3g; AltName: Full=Eukaryotic translation
initiation factor 3 RNA-binding subunit; Short=eIF-3
RNA-binding subunit; AltName: Full=Translation
initiation factor eIF3 p33 subunit homolog; Short=eIF3
p33 homolog
gi|160703713|gb|EAT79965.2| hypothetical protein SNOG_12667 [Phaeosphaeria nodorum SN15]
Length = 281
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
AE + +FS+YG VT V L K + TG+ KGFAFV ++ + +A KA E
Sbjct: 213 AEEQDLRDMFSRYGHVTRVFLAKDRETGRAKGFAFVSYADRTDAAKACE 261
>gi|156398787|ref|XP_001638369.1| predicted protein [Nematostella vectensis]
gi|156225489|gb|EDO46306.1| predicted protein [Nematostella vectensis]
Length = 504
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 1 MAELVENNKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVE 60
+ + + KKY R+ + P E D I+SVF +GKV + SL K TGK KG+ F+E
Sbjct: 150 IEQFEQEAKKYARIYIASVHPDLLEDD-IKSVFEAFGKVVHCSLSKEPMTGKHKGYGFIE 208
Query: 61 FSTKEEATKAL 71
+ ++ A A+
Sbjct: 209 YENQQSANDAI 219
>gi|82540036|ref|XP_724364.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23478982|gb|EAA15929.1| RNA binding motif protein 8B-related [Plasmodium yoelii yoelii]
Length = 95
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 40/68 (58%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
G +++ + EA DYI+ VF ++G++ + L + TG +KG+AF+EF +A +A+
Sbjct: 22 GWIIIITNIHGEAREDYIKEVFEEFGQIRNLHLNLDRRTGFIKGYAFLEFENFVDAKRAI 81
Query: 72 ELGLNPCP 79
+ N C
Sbjct: 82 DGMSNKCD 89
>gi|425463678|ref|ZP_18843008.1| RNA-binding region protein [Microcystis aeruginosa PCC 9809]
gi|389830338|emb|CCI27810.1| RNA-binding region protein [Microcystis aeruginosa PCC 9809]
Length = 84
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 32/44 (72%)
Query: 29 IESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
++ VF++YG V+ V LP + TGK++GF FVE S+ EE KA+E
Sbjct: 1 MKEVFAEYGTVSRVYLPVDRETGKMRGFGFVEMSSDEEEAKAIE 44
>gi|198457340|ref|XP_002136252.1| GA27844 [Drosophila pseudoobscura pseudoobscura]
gi|198142558|gb|EDY71291.1| GA27844 [Drosophila pseudoobscura pseudoobscura]
Length = 226
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 47/75 (62%), Gaps = 6/75 (8%)
Query: 2 AELVENNKKYGRVVLKEKLPPEAEHD---YIESVFSKYGKVTYVSLPKFKSTGKLKGFAF 58
++L+E ++ +V K K+P + + + ++ VFS+YG V YVSLP + T K+K FAF
Sbjct: 54 SQLLELDESALKVRRKTKMPDQRDVNDKTLLKEVFSRYGPVAYVSLPHYPGTKKIKEFAF 113
Query: 59 VEF---STKEEATKA 70
+EF S E+A KA
Sbjct: 114 IEFERSSALEKAVKA 128
>gi|425447147|ref|ZP_18827139.1| putative RNA-binding protein rbpB [Microcystis aeruginosa PCC
9443]
gi|389732378|emb|CCI03686.1| putative RNA-binding protein rbpB [Microcystis aeruginosa PCC
9443]
Length = 100
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 34/53 (64%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
L E + + VF++YG V V LP ++TGK++GF FVE S+ EE KA+E
Sbjct: 8 LVYEVTKEDLHGVFAEYGTVVRVYLPVDQATGKMRGFGFVEMSSDEEEAKAIE 60
>gi|440752711|ref|ZP_20931914.1| RNA recognition motif family protein [Microcystis aeruginosa
TAIHU98]
gi|440177204|gb|ELP56477.1| RNA recognition motif family protein [Microcystis aeruginosa
TAIHU98]
Length = 84
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 32/44 (72%)
Query: 29 IESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
++ VF++YG V+ V LP + TGK++GF FVE S+ EE KA+E
Sbjct: 1 MKEVFAEYGTVSRVYLPVDRETGKMRGFGFVEMSSDEEEAKAIE 44
>gi|427719544|ref|YP_007067538.1| RNP-1 like RNA-binding protein [Calothrix sp. PCC 7507]
gi|427351980|gb|AFY34704.1| RNP-1 like RNA-binding protein [Calothrix sp. PCC 7507]
Length = 101
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 34/53 (64%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
L + + ++ VFS+YG V V LP + TG+++GF FVE T+ E TKA+E
Sbjct: 8 LSYQVREEDLKQVFSEYGTVKTVQLPVDRETGRVRGFGFVEMETEAEETKAIE 60
>gi|428305437|ref|YP_007142262.1| RNP-1 like RNA-binding protein [Crinalium epipsammum PCC 9333]
gi|428246972|gb|AFZ12752.1| RNP-1 like RNA-binding protein [Crinalium epipsammum PCC 9333]
Length = 102
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Query: 25 EHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
E D E VF++YG V V LP + TG+++GF FVE ST +E T A++
Sbjct: 14 EEDLTE-VFAEYGTVKRVQLPTDRETGRMRGFGFVEMSTDDEETAAID 60
>gi|307153774|ref|YP_003889158.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7822]
gi|306984002|gb|ADN15883.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7822]
Length = 102
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 31/52 (59%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
LP E E D + VF++YGKV V +P + TG+ +GF FVE T + A+
Sbjct: 8 LPFEVEEDNLNEVFAEYGKVKRVYMPVDRDTGRRRGFGFVEMETSAQEDSAI 59
>gi|268574300|ref|XP_002642127.1| C. briggsae CBR-RNP-4 protein [Caenorhabditis briggsae]
Length = 142
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 38/61 (62%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
G +V + EA D + FS+YGK+ + L + TG LKG+A VE+ T++EA++A+
Sbjct: 54 GWIVFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYETQKEASEAI 113
Query: 72 E 72
E
Sbjct: 114 E 114
>gi|195997575|ref|XP_002108656.1| hypothetical protein TRIADDRAFT_5340 [Trichoplax adhaerens]
gi|190589432|gb|EDV29454.1| hypothetical protein TRIADDRAFT_5340, partial [Trichoplax
adhaerens]
Length = 172
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 32/52 (61%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
LPP + ++ F KYG V+ V L + K TG+L+GF FV F T E A KAL
Sbjct: 94 LPPNTSDEDLKIYFGKYGVVSEVELLRDKETGRLRGFGFVSFDTPEGAQKAL 145
>gi|326427500|gb|EGD73070.1| hypothetical protein PTSG_12213 [Salpingoeca sp. ATCC 50818]
Length = 1010
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 36/66 (54%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
G V + ++ HD ++ + S++G V Y L K K T +G AFV FS+KEEA L
Sbjct: 590 GHTVFVRDMSLDSTHDDLKELMSQFGTVKYALLVKDKQTDLPRGTAFVRFSSKEEADACL 649
Query: 72 ELGLNP 77
E NP
Sbjct: 650 EAASNP 655
Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 31/61 (50%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
GR + + +P + + +F +G+ Y + + +G+ +G FV+F TKE A L
Sbjct: 497 GRTLFVDHIPTSVKTPRMVKLFHAFGETVYCRILRDHESGESRGRGFVKFKTKEAADACL 556
Query: 72 E 72
E
Sbjct: 557 E 557
>gi|218437654|ref|YP_002375983.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7424]
gi|218170382|gb|ACK69115.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7424]
Length = 110
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 34/53 (64%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+P + D I+ VF +YG V V LP + +G+++GFAFV+ T+++ A+E
Sbjct: 8 IPYQVTQDDIKEVFGEYGTVKQVKLPVDRESGRVRGFAFVDLDTEDQENSAIE 60
>gi|428203936|ref|YP_007082525.1| RRM domain-containing RNA-binding protein [Pleurocapsa sp. PCC
7327]
gi|427981368|gb|AFY78968.1| RRM domain-containing RNA-binding protein [Pleurocapsa sp. PCC
7327]
Length = 97
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 29 IESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+ SVF++YG V V +P + TG+++GFAFVE T E T A+E
Sbjct: 17 LNSVFAEYGSVKRVHIPTDRETGRMRGFAFVEMETAAEETSAIE 60
>gi|218438646|ref|YP_002376975.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7424]
gi|218171374|gb|ACK70107.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7424]
Length = 105
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 23 EAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
E D + VF++YG V+ V LP + TG+++GF FVE ST E A+E
Sbjct: 11 EVTQDELREVFAEYGTVSRVYLPVDRETGRMRGFGFVEMSTDAEEDTAIE 60
>gi|172035063|ref|YP_001801564.1| RNA-binding protein [Cyanothece sp. ATCC 51142]
gi|354551929|ref|ZP_08971237.1| RNP-1 like RNA-binding protein [Cyanothece sp. ATCC 51472]
gi|171696517|gb|ACB49498.1| RNA-binding protein [Cyanothece sp. ATCC 51142]
gi|353555251|gb|EHC24639.1| RNP-1 like RNA-binding protein [Cyanothece sp. ATCC 51472]
Length = 81
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 31/44 (70%)
Query: 29 IESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+ +VFS YG V + +P + TG+ +GFAFVE T+EE +KA++
Sbjct: 17 LNTVFSDYGSVKRIHIPTDRETGRPRGFAFVEMDTEEEESKAID 60
>gi|308487674|ref|XP_003106032.1| CRE-RNP-4 protein [Caenorhabditis remanei]
gi|308254606|gb|EFO98558.1| CRE-RNP-4 protein [Caenorhabditis remanei]
Length = 142
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
G +V + EA D + FS+YGK+ + L + TG LKG+A VE+ T++EA +A+
Sbjct: 54 GWIVFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYETQKEANEAI 113
Query: 72 E 72
E
Sbjct: 114 E 114
>gi|443315198|ref|ZP_21044702.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
6406]
gi|442785209|gb|ELR95045.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
6406]
Length = 103
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 31/44 (70%)
Query: 29 IESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+E VF +YG+V+ VSLP + TG+ +GFAFV+ + E KA+E
Sbjct: 17 LEQVFKEYGEVSRVSLPTDRETGRPRGFAFVDMQAEAEEDKAIE 60
>gi|390437867|ref|ZP_10226380.1| putative RNA-binding protein rbpF [Microcystis sp. T1-4]
gi|389838700|emb|CCI30504.1| putative RNA-binding protein rbpF [Microcystis sp. T1-4]
Length = 100
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 30/44 (68%)
Query: 29 IESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+ VF++YG V V LP + TGK++GF FVE S+ EE KA+E
Sbjct: 17 LHDVFAEYGTVIRVYLPVDRETGKMRGFGFVEMSSDEEEAKAIE 60
>gi|428203095|ref|YP_007081684.1| RRM domain-containing RNA-binding protein [Pleurocapsa sp. PCC
7327]
gi|427980527|gb|AFY78127.1| RRM domain-containing RNA-binding protein [Pleurocapsa sp. PCC
7327]
Length = 99
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 32/53 (60%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
L E + +E VF +YG V V +P + TG+ +GFAFVE T+ E T A+E
Sbjct: 8 LSYEVTQEDLERVFKEYGTVNRVQMPTDRETGRPRGFAFVEMGTEAEETTAIE 60
>gi|126644829|ref|XP_001388131.1| cutinase negative acting protein [Cryptosporidium parvum Iowa II]
gi|126117359|gb|EAZ51459.1| cutinase negative acting protein, putative [Cryptosporidium parvum
Iowa II]
Length = 711
Score = 48.9 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 39/63 (61%)
Query: 11 YGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKA 70
YG V+ +P ++ + ++S F+ G V VS+P++ TGK++GFA VEF E+ A
Sbjct: 590 YGPSVIVRNIPFSSDDESVKSFFNGCGVVKRVSIPRYSDTGKMRGFAMVEFENDEQIQNA 649
Query: 71 LEL 73
L+L
Sbjct: 650 LKL 652
>gi|354568550|ref|ZP_08987714.1| RNP-1 like RNA-binding protein [Fischerella sp. JSC-11]
gi|353540273|gb|EHC09750.1| RNP-1 like RNA-binding protein [Fischerella sp. JSC-11]
Length = 106
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 30/44 (68%)
Query: 29 IESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+ VF++YG V V LP + TG+++GFAFVE + EE +A+E
Sbjct: 17 LREVFAEYGTVKKVQLPTDRDTGRVRGFAFVEMQSDEEEERAIE 60
>gi|323510053|dbj|BAJ77920.1| cgd3_4150 [Cryptosporidium parvum]
Length = 747
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 39/63 (61%)
Query: 11 YGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKA 70
YG V+ +P ++ + ++S F+ G V VS+P++ TGK++GFA VEF E+ A
Sbjct: 626 YGPSVIVRNIPFSSDDESVKSFFNGCGVVKRVSIPRYSDTGKMRGFAMVEFENDEQIQNA 685
Query: 71 LEL 73
L+L
Sbjct: 686 LKL 688
>gi|367020140|ref|XP_003659355.1| hypothetical protein MYCTH_2296269 [Myceliophthora thermophila ATCC
42464]
gi|347006622|gb|AEO54110.1| hypothetical protein MYCTH_2296269 [Myceliophthora thermophila ATCC
42464]
Length = 534
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 46/94 (48%), Gaps = 13/94 (13%)
Query: 2 AELVENNKKYGRVVLKE-------KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLK 54
A E +K+G V+ E LP A+ D + F+K KV + +P + +G+ K
Sbjct: 383 ARAAERARKHGDVISPESDTLFVGNLPFSADEDSVSKFFNKAAKVQSLRIPTDQESGRPK 442
Query: 55 GFAFVEFSTKEEATKALE------LGLNPCPTDY 82
GFA+V FS+ E+A KA E L P DY
Sbjct: 443 GFAYVTFSSVEDAKKAFETLNGSDLDGRPVRLDY 476
>gi|156087831|ref|XP_001611322.1| RNA recognition motif domain containing protein [Babesia bovis]
gi|154798576|gb|EDO07754.1| RNA recognition motif domain containing protein [Babesia bovis]
Length = 98
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 37/60 (61%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
G V++ + PEA+ + I F +G++T + L + +G KG+AF+EFS ++EA A+
Sbjct: 13 GWVIIVTGVHPEAQEEDIRDAFEGFGQITSIHLNMDRRSGYAKGYAFIEFSEQQEARSAI 72
>gi|411118097|ref|ZP_11390478.1| RRM domain-containing RNA-binding protein [Oscillatoriales
cyanobacterium JSC-12]
gi|410711821|gb|EKQ69327.1| RRM domain-containing RNA-binding protein [Oscillatoriales
cyanobacterium JSC-12]
Length = 100
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 29/46 (63%)
Query: 27 DYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
D + F++YG V V LP + TG+L+GFAFVE T E KA+E
Sbjct: 15 DDLTQTFAEYGTVKRVQLPTDRETGRLRGFAFVEMETDAEEDKAIE 60
>gi|440632913|gb|ELR02832.1| hypothetical protein GMDG_05768 [Geomyces destructans 20631-21]
Length = 984
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 34/77 (44%), Positives = 43/77 (55%), Gaps = 5/77 (6%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
GR + L A D +++VFSKYG V V + + GK KG AFV F+ EEATKAL
Sbjct: 732 GREIHIAGLDRGASEDDLQAVFSKYGAVESVRILR-NIAGKSKGSAFVVFAKAEEATKAL 790
Query: 72 ELGLNPCPTDYQSSILT 88
EL T + S +LT
Sbjct: 791 ELD----KTKFWSQVLT 803
>gi|427792459|gb|JAA61681.1| Putative nucleolar protein fibrillarin nop77 rrm superfamily,
partial [Rhipicephalus pulchellus]
Length = 645
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 30/74 (40%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Query: 3 ELVENNKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFS 62
E K+ R++++ L +A + FSKYG V V++PK KS GK++GFAFV+F
Sbjct: 111 EKAARKKRKPRLIVR-NLSFKATEKTLRDCFSKYGNVVEVTIPK-KSDGKMRGFAFVQFD 168
Query: 63 TKEEATKALELGLN 76
+ A KA+ GLN
Sbjct: 169 ETKSAIKAIN-GLN 181
>gi|443477523|ref|ZP_21067364.1| RNP-1 like RNA-binding protein [Pseudanabaena biceps PCC 7429]
gi|443017338|gb|ELS31803.1| RNP-1 like RNA-binding protein [Pseudanabaena biceps PCC 7429]
Length = 111
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 30/53 (56%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
L E D+++ VF YGKVT V P + TG+ +GFAFVE S E A+
Sbjct: 7 NLSYEVTQDHLKPVFEDYGKVTRVHFPTDRETGRARGFAFVEMSQDAEEDAAI 59
>gi|170076900|ref|YP_001733538.1| RNA-binding protein [Synechococcus sp. PCC 7002]
gi|169884569|gb|ACA98282.1| RNA-binding protein [Synechococcus sp. PCC 7002]
Length = 84
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 29/48 (60%)
Query: 25 EHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
E D + VF+ YGKV V LP + T + +GF FVE S EE KA+E
Sbjct: 13 EEDDLREVFNDYGKVKRVYLPVDRETQRKRGFGFVEMSNDEEEDKAIE 60
>gi|440634550|gb|ELR04469.1| hypothetical protein GMDG_06775 [Geomyces destructans 20631-21]
Length = 294
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 32/48 (66%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
AE D + ++F ++G VT V L K + TG KGFAF+ F+ +++A KA
Sbjct: 225 AEEDELRAMFQRFGHVTRVFLAKDRETGMAKGFAFISFTNRDDAAKAC 272
>gi|425434850|ref|ZP_18815314.1| putative RNA-binding protein rbpA [Microcystis aeruginosa PCC
9432]
gi|389675574|emb|CCH95321.1| putative RNA-binding protein rbpA [Microcystis aeruginosa PCC
9432]
Length = 97
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 30/53 (56%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
L E D + VF YGKV V +P K TG+ +GFAFVE K + KA+E
Sbjct: 8 LSYEISQDDLVEVFQDYGKVQRVHIPVDKETGRKRGFAFVEMENKAQEAKAIE 60
>gi|304055|gb|AAA17426.1| RNA-binding protein [Anabaena sp.]
Length = 103
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 32/53 (60%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
L + D + +VF++YG V V LP + TG+++GF FVE + E T A+E
Sbjct: 8 LSYDVTEDSLNAVFAEYGSVKRVQLPTDRETGRMRGFGFVEMGSDAEETAAIE 60
>gi|17229579|ref|NP_486127.1| RNA-binding protein RbpA2 [Nostoc sp. PCC 7120]
gi|75909339|ref|YP_323635.1| RNA-binding region RNP-1 [Anabaena variabilis ATCC 29413]
gi|17131178|dbj|BAB73786.1| RNA-binding protein RbpA2 [Nostoc sp. PCC 7120]
gi|75703064|gb|ABA22740.1| RNA-binding region RNP-1 [Anabaena variabilis ATCC 29413]
Length = 103
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 32/53 (60%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
L + D + +VF++YG V V LP + TG+++GF FVE + E T A+E
Sbjct: 8 LSYDVTEDSLNAVFAEYGSVKRVQLPTDRETGRMRGFGFVEMGSDAEETAAIE 60
>gi|427415488|ref|ZP_18905672.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
7375]
gi|425756163|gb|EKU97020.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
7375]
Length = 90
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 35/53 (66%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
L +A ++ + +VF++YG V V LP + TG+++GFAFVE + E T A+E
Sbjct: 8 LSYDATNEDLTAVFAEYGTVKSVHLPTDRETGRMRGFAFVEMGAESEETAAIE 60
>gi|452979604|gb|EME79366.1| hypothetical protein MYCFIDRAFT_212200 [Pseudocercospora fijiensis
CIRAD86]
Length = 294
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 32/49 (65%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
AE + +F +YG+VT V L K + TG+ KGFAFV ++ + +A +A E
Sbjct: 224 AEEGDLRDMFERYGRVTRVFLAKDRETGRAKGFAFVSYADRSDAARACE 272
>gi|354566092|ref|ZP_08985265.1| RNP-1 like RNA-binding protein [Fischerella sp. JSC-11]
gi|353546600|gb|EHC16048.1| RNP-1 like RNA-binding protein [Fischerella sp. JSC-11]
Length = 84
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 7/82 (8%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLNPCP 79
L E + D ++ +FSKYG V V LP +++TG+ + FAFVE T E A+ +
Sbjct: 8 LSDEIQEDDLKQMFSKYGSVVKVRLPIYRATGERRRFAFVEMETDAEEAVAIH---SLLG 64
Query: 80 TDYQSSILTTTSRLSFGITPLG 101
T+Y L R++ IT +G
Sbjct: 65 TEYMGRNL----RVNKAITKVG 82
>gi|374586124|ref|ZP_09659216.1| RNP-1 like RNA-binding protein [Leptonema illini DSM 21528]
gi|373874985|gb|EHQ06979.1| RNP-1 like RNA-binding protein [Leptonema illini DSM 21528]
Length = 102
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 34/53 (64%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
LP A D ++++F+ +G V V++P + TG+ +GFAFVE EA++A+
Sbjct: 7 NLPFRASSDELQNIFAAHGTVARVTIPVDRETGRSRGFAFVEMPNDAEASEAI 59
>gi|166365958|ref|YP_001658231.1| RNA binding protein [Microcystis aeruginosa NIES-843]
gi|425466552|ref|ZP_18845850.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC
9809]
gi|166088331|dbj|BAG03039.1| RNA binding protein [Microcystis aeruginosa NIES-843]
gi|389830907|emb|CCI26790.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC
9809]
Length = 98
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
LP E + D + VF +YG++ V LP + T + +GFAFVE T E+ KA+
Sbjct: 8 LPFEVDQDDVVEVFKEYGEIKRVHLPMDRETKRKRGFAFVEMETPEQEAKAI 59
>gi|313231584|emb|CBY08698.1| unnamed protein product [Oikopleura dioica]
Length = 278
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 36/53 (67%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
L P A D ++++F+K+GK+ + L + + T + +GFAF+ F +++A +A++
Sbjct: 188 LSPAATQDDVQTLFAKFGKIARIHLGRDRRTNESRGFAFINFHHRDDAQRAID 240
>gi|33865457|ref|NP_897016.1| rna-binding protein RbpD [Synechococcus sp. WH 8102]
gi|33632626|emb|CAE07438.1| putativeRNA-binding protein RbpD [Synechococcus sp. WH 8102]
Length = 96
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 35/53 (66%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
L +AE +++ +FS+YG+V SLP + TG+ +GFAFVE E+ KA++
Sbjct: 8 LSFQAEQEHLFDLFSEYGEVKNCSLPLDRETGRKRGFAFVEMVNDEDEQKAID 60
>gi|406859894|gb|EKD12956.1| RNA recognition domain-containing protein [Marssonina brunnea f.
sp. 'multigermtubi' MB_m1]
Length = 1039
Score = 48.5 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 29/62 (46%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
GR + + P D +E +FSKYGKV V+L K +G+ KG AFV F+TKE A AL
Sbjct: 743 GREIHVTSIDPSITPDELEKLFSKYGKVERVNLLT-KVSGESKGAAFVSFATKEGAAAAL 801
Query: 72 EL 73
+L
Sbjct: 802 DL 803
>gi|320168309|gb|EFW45208.1| RNA binding domain-containing protein [Capsaspora owczarzaki ATCC
30864]
Length = 1179
Score = 48.5 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+P EA + VFS +G++ V LP+ K G+ +GFAF+EF TKEEA KA E
Sbjct: 1070 VPFEATRKELFDVFSPFGQLKSVRLPQ-KPGGQHRGFAFIEFLTKEEAKKAFE 1121
Score = 38.9 bits (89), Expect = 0.45, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
GR+ ++ LP D + ++FSK+G++ V +P K T K GFAFV F E A A
Sbjct: 607 GRLFVR-NLPYTCTEDDLIALFSKFGQLAEVHMPIDKETKKPTGFAFVLFLMPEHAVTAF 665
>gi|113475531|ref|YP_721592.1| RNA-binding region RNP-1 [Trichodesmium erythraeum IMS101]
gi|110166579|gb|ABG51119.1| RNA-binding region RNP-1 [Trichodesmium erythraeum IMS101]
Length = 89
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 23 EAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLN 76
+A + +++ F+KYG V V +P + TG+ +GFAFVE +++E T A+E GL+
Sbjct: 11 DATDEDLKTAFAKYGNVKRVQVPNDRETGRPRGFAFVEMESEDEETAAIE-GLD 63
>gi|9843653|emb|CAC03600.1| splicing factor SC35 [Arabidopsis thaliana]
Length = 303
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 32/46 (69%)
Query: 27 DYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
D + +F+KYGKV V +P+ + TG +GFAFV + K+EA KA+E
Sbjct: 30 DDLYPLFAKYGKVVDVFIPRDRRTGDSRGFAFVRYKYKDEAHKAVE 75
>gi|453085721|gb|EMF13764.1| translation initiation factor 3, RNA-binding subunit
[Mycosphaerella populorum SO2202]
Length = 295
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 32/49 (65%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
AE + +F +YG+VT V L K + TG+ KGFAFV ++ + +A +A E
Sbjct: 225 AEEGDLREMFERYGRVTRVFLAKDRETGRAKGFAFVSYADRSDAARACE 273
>gi|332710459|ref|ZP_08430406.1| RRM domain RNA-binding protein [Moorea producens 3L]
gi|332350790|gb|EGJ30383.1| RRM domain RNA-binding protein [Moorea producens 3L]
Length = 93
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
L +A D +++VF YG V V +P + TGK++GFAFVE + ++ A+E
Sbjct: 8 LSYQATEDDLKTVFGDYGTVKRVVMPTDRETGKMRGFAFVEMTESDQEDSAIE 60
>gi|260943682|ref|XP_002616139.1| hypothetical protein CLUG_03380 [Clavispora lusitaniae ATCC 42720]
gi|238849788|gb|EEQ39252.1| hypothetical protein CLUG_03380 [Clavispora lusitaniae ATCC 42720]
Length = 134
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 2 AELVENNKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEF 61
A V+ N K+ R+ + L PEA D + + FSKY ++ S+P K TGK KGF FV F
Sbjct: 43 APAVKWNPKHFRLFVGN-LGPEATEDVLLAAFSKYSSLSKASVPLDKKTGKNKGFGFVSF 101
Query: 62 STKEEATKALE 72
+T E+ KA +
Sbjct: 102 ATSEDYLKAFK 112
>gi|297797433|ref|XP_002866601.1| hypothetical protein ARALYDRAFT_496619 [Arabidopsis lyrata subsp.
lyrata]
gi|297312436|gb|EFH42860.1| hypothetical protein ARALYDRAFT_496619 [Arabidopsis lyrata subsp.
lyrata]
Length = 305
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 32/46 (69%)
Query: 27 DYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
D + +F+KYGKV V +P+ + TG +GFAFV + K+EA KA+E
Sbjct: 30 DDLYPLFAKYGKVVDVFIPRDRRTGDSRGFAFVRYKYKDEAHKAVE 75
>gi|160331548|ref|XP_001712481.1| pab2 [Hemiselmis andersenii]
gi|159765929|gb|ABW98156.1| pab2 [Hemiselmis andersenii]
Length = 524
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 45/68 (66%), Gaps = 2/68 (2%)
Query: 4 LVENNKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFST 63
+EN+K +G+++++ +P E + ++ ++ +GK+ V LPK K+ + KGFAF+EF
Sbjct: 438 FMENSKLHGKILIRN-IPFEIQLKELKKIYENFGKILSVRLPK-KTPKQHKGFAFIEFEK 495
Query: 64 KEEATKAL 71
EEA KA+
Sbjct: 496 IEEAKKAV 503
>gi|17554514|ref|NP_497891.1| Protein RNP-4 [Caenorhabditis elegans]
gi|3878950|emb|CAA83626.1| Protein RNP-4 [Caenorhabditis elegans]
Length = 142
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 37/61 (60%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
G +V + EA D + FS+YGK+ + L + TG LKG+A VE+ T++EA +A+
Sbjct: 54 GWIVFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYETQKEANEAI 113
Query: 72 E 72
+
Sbjct: 114 D 114
>gi|121710854|ref|XP_001273043.1| pre-mRNA splicing factor (Prp24), putative [Aspergillus clavatus NRRL
1]
gi|119401193|gb|EAW11617.1| pre-mRNA splicing factor (Prp24), putative [Aspergillus clavatus NRRL
1]
Length = 1310
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 26/62 (41%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
GR + + +A D ++ +FSKYG+V V +P+ K G KGF ++ FSTKEEA AL
Sbjct: 1005 GREIHVSNIDWKASEDDLKDLFSKYGRVETVRIPR-KVDGGSKGFGYIVFSTKEEANAAL 1063
Query: 72 EL 73
+
Sbjct: 1064 AM 1065
Score = 38.1 bits (87), Expect = 0.74, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
G + P A+ YI ++F +YG++ V P K + F +V+F + E+A A+
Sbjct: 914 GSTLFVTNFPSTADESYIRNLFHEYGEIIDVRFPSLKYNTHRR-FCYVQFKSAEDAHNAV 972
Query: 72 EL 73
+L
Sbjct: 973 QL 974
>gi|15237641|ref|NP_201225.1| splicing factor, arginine/serine-rich 2 [Arabidopsis thaliana]
gi|30697964|ref|NP_851261.1| splicing factor, arginine/serine-rich 2 [Arabidopsis thaliana]
gi|9759396|dbj|BAB09851.1| unnamed protein product [Arabidopsis thaliana]
gi|17380868|gb|AAL36246.1| unknown protein [Arabidopsis thaliana]
gi|21689657|gb|AAM67450.1| unknown protein [Arabidopsis thaliana]
gi|22022546|gb|AAM83231.1| AT5g64200/MSJ1_4 [Arabidopsis thaliana]
gi|23505861|gb|AAN28790.1| At5g64200/MSJ1_4 [Arabidopsis thaliana]
gi|332010470|gb|AED97853.1| splicing factor, arginine/serine-rich 2 [Arabidopsis thaliana]
gi|332010471|gb|AED97854.1| splicing factor, arginine/serine-rich 2 [Arabidopsis thaliana]
Length = 303
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 32/46 (69%)
Query: 27 DYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
D + +F+KYGKV V +P+ + TG +GFAFV + K+EA KA+E
Sbjct: 30 DDLYPLFAKYGKVVDVFIPRDRRTGDSRGFAFVRYKYKDEAHKAVE 75
>gi|146165272|ref|XP_001014712.2| hypothetical protein TTHERM_00047170 [Tetrahymena thermophila]
gi|146145520|gb|EAR94568.2| hypothetical protein TTHERM_00047170 [Tetrahymena thermophila
SB210]
Length = 261
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 2 AELVENNK-KYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVE 60
E+ ENN R V LP A+ D I+ F G + + LP+++ TGK+ G+ +
Sbjct: 12 VEVQENNDPSLKRSVFVSGLPYSADTDAIKEYFQNCGTIENIKLPRYQDTGKIIGYCHLV 71
Query: 61 FSTKEEATKALELG 74
FST EEA +A++L
Sbjct: 72 FSTPEEAQEAIKLN 85
>gi|428207498|ref|YP_007091851.1| RNP-1 like RNA-binding protein [Chroococcidiopsis thermalis PCC
7203]
gi|428009419|gb|AFY87982.1| RNP-1 like RNA-binding protein [Chroococcidiopsis thermalis PCC
7203]
Length = 98
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 32/54 (59%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
L E + + + F++YG V V LP + TG+++GFAFVE T E T A++
Sbjct: 7 NLSYEVTQEDLSAAFAEYGSVKRVQLPTDRETGRMRGFAFVEMDTDTEETAAID 60
>gi|113478077|ref|YP_724138.1| RNA-binding region RNP-1 [Trichodesmium erythraeum IMS101]
gi|110169125|gb|ABG53665.1| RNA-binding region RNP-1 [Trichodesmium erythraeum IMS101]
Length = 102
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 26 HDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
D + VF++YG V V LP + TG+ +GF FVE S++ E KA+E
Sbjct: 14 QDDLSEVFAEYGTVKRVQLPTDRETGRPRGFGFVEMSSENEEQKAIE 60
>gi|330802862|ref|XP_003289431.1| hypothetical protein DICPUDRAFT_11237 [Dictyostelium purpureum]
gi|325080473|gb|EGC34027.1| hypothetical protein DICPUDRAFT_11237 [Dictyostelium purpureum]
Length = 168
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 31/45 (68%)
Query: 29 IESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALEL 73
++ F GK+T VSLP ++ +G+LKGFAFV F ++E KA+ L
Sbjct: 108 VKEFFQGCGKITRVSLPTYEDSGRLKGFAFVSFDSEEAVDKAIAL 152
>gi|115398692|ref|XP_001214935.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114191818|gb|EAU33518.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 1291
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 28/62 (45%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
GR + + +A D ++ +FSKYG V V +P+ K G KGF +V FSTKEEA AL
Sbjct: 990 GREIHVSNVDWKANEDDLKELFSKYGHVELVRIPR-KVDGGSKGFGYVVFSTKEEAQAAL 1048
Query: 72 EL 73
L
Sbjct: 1049 AL 1050
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALEL 73
PP A+ YI +F ++G++ + P K + F +V+F T E A A +L
Sbjct: 907 FPPTADEKYIRDLFHEFGEIIDIRFPSLKYNTHRR-FCYVQFKTGEAAQNATKL 959
>gi|226481272|emb|CAX79101.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
Length = 210
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKA 70
LP HD + F +YG++ V++P TG++KG+AF+EF +A A
Sbjct: 13 LPDTCRHDDLRRCFGRYGRIVDVTIPLDFFTGRMKGYAFIEFGNPRDAEDA 63
>gi|195999416|ref|XP_002109576.1| hypothetical protein TRIADDRAFT_9217 [Trichoplax adhaerens]
gi|190587700|gb|EDV27742.1| hypothetical protein TRIADDRAFT_9217, partial [Trichoplax
adhaerens]
Length = 74
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLNPC 78
+L A D+++ +FS YGKV V +P ++ G +GFA++EF + A A++ +N
Sbjct: 5 RLTRNATKDHVQEIFSNYGKVKNVDVPTDRANGLPRGFAYIEFENGKSAENAIKY-MNGG 63
Query: 79 PTDYQS 84
D Q+
Sbjct: 64 QIDGQA 69
>gi|427701549|ref|YP_007044771.1| RRM domain-containing RNA-binding protein [Cyanobium gracile PCC
6307]
gi|427344717|gb|AFY27430.1| RRM domain-containing RNA-binding protein [Cyanobium gracile PCC
6307]
Length = 96
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 35/54 (64%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
L +AE D + +F++YG + SLP + TG+ +GFAFVE + + + TKA++
Sbjct: 7 NLSFDAEVDDLNHLFAQYGALRNCSLPLDRETGRKRGFAFVEMANEADETKAID 60
>gi|256076749|ref|XP_002574672.1| serine/arginine rich splicing factor [Schistosoma mansoni]
gi|360045341|emb|CCD82889.1| putative serine/arginine rich splicing factor [Schistosoma
mansoni]
Length = 210
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKA 70
LP HD + F +YG++ V++P TG++KG+AF+EF +A A
Sbjct: 13 LPDTCRHDDLRRCFGRYGRIVDVTIPLDFFTGRMKGYAFIEFENPRDAEDA 63
>gi|409993905|ref|ZP_11277031.1| RNA-binding region RNP-1 [Arthrospira platensis str. Paraca]
gi|291569285|dbj|BAI91557.1| RNA-binding protein [Arthrospira platensis NIES-39]
gi|409935253|gb|EKN76791.1| RNA-binding region RNP-1 [Arthrospira platensis str. Paraca]
Length = 103
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALEL--GLN 76
L E D + +VF++YG V V LP + TG+++GF FVE T+ E A++ G
Sbjct: 7 NLSYEVTEDDLTAVFAEYGSVKRVKLPTDRETGRMRGFGFVEMDTEAEEQSAIDALDGAE 66
Query: 77 PCPTDYQ 83
C D +
Sbjct: 67 WCGRDLR 73
>gi|224097146|ref|XP_002310851.1| predicted protein [Populus trichocarpa]
gi|222853754|gb|EEE91301.1| predicted protein [Populus trichocarpa]
Length = 289
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+ + + LPP + D++ YG++ + L + ST K K F FV+FST E A +E
Sbjct: 204 KTIFLDGLPPHWDEDHVRECVKGYGEIVRIVLARNMSTAKRKDFGFVDFSTHEAAVACIE 263
Query: 73 LGLNPCPTDYQSSILTTTSRLS 94
G+N ++ + +RLS
Sbjct: 264 -GINNREFGNGNTKMRVKARLS 284
Score = 40.8 bits (94), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 32/58 (55%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLNP 77
L +A + + VF K G+V V L K ST + KG+AFV+F+ K +AL NP
Sbjct: 33 LDRDATEEDLRKVFEKIGEVVEVRLHKNLSTNRNKGYAFVKFANKGHVKRALSEMKNP 90
>gi|148239850|ref|YP_001225237.1| RNA-binding protein [Synechococcus sp. WH 7803]
gi|147848389|emb|CAK23940.1| RNA-binding protein, RRM domain [Synechococcus sp. WH 7803]
Length = 116
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 35/53 (66%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
L +AE + + +FS+YG+V SLP + TG+ +GF FVE ++ E+ KA++
Sbjct: 8 LSFQAEQEDLLDLFSQYGEVKSASLPLDRETGRKRGFGFVEMNSDEDEQKAID 60
>gi|224488025|sp|A4RHN3.1|EIF3G_MAGO7 RecName: Full=Eukaryotic translation initiation factor 3 subunit G;
Short=eIF3g; AltName: Full=Eukaryotic translation
initiation factor 3 RNA-binding subunit; Short=eIF-3
RNA-binding subunit; AltName: Full=Translation
initiation factor eIF3 p33 subunit homolog; Short=eIF3
p33 homolog
gi|440466137|gb|ELQ35419.1| eukaryotic translation initiation factor 3 subunit G [Magnaporthe
oryzae Y34]
gi|440480691|gb|ELQ61344.1| eukaryotic translation initiation factor 3 subunit G [Magnaporthe
oryzae P131]
Length = 303
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 31/48 (64%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
AE + +F ++G+VT V L K + TG KGFAF+ F+ +E+A KA
Sbjct: 234 AEEQELRDMFERFGRVTRVFLAKDRDTGLAKGFAFISFADREDAVKAC 281
>gi|226476572|emb|CAX72178.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226476574|emb|CAX72179.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
Length = 125
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKA 70
LP HD + F +YG++ V++P TG++KG+AF+EF +A A
Sbjct: 13 LPDTCRHDDLRRCFGRYGRIVDVTIPLDFFTGRMKGYAFIEFENPRDAEDA 63
>gi|390597906|gb|EIN07305.1| polyadenylate binding protein [Punctularia strigosozonata HHB-11173
SS5]
Length = 668
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 2 AELVENNKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEF 61
A+L E K++ V +K + PEA D +F+ +G VT L + G+ +GF FV F
Sbjct: 223 AKLDEQKKQFTNVYVK-NIDPEANDDEFRELFTPFGNVTSAVLQR-DEEGRSRGFGFVNF 280
Query: 62 STKEEATKALE 72
T EEA KA++
Sbjct: 281 ETHEEAQKAVD 291
>gi|389635291|ref|XP_003715298.1| eukaryotic translation initiation factor 3 subunit G [Magnaporthe
oryzae 70-15]
gi|351647631|gb|EHA55491.1| eukaryotic translation initiation factor 3 subunit G [Magnaporthe
oryzae 70-15]
Length = 324
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 31/48 (64%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
AE + +F ++G+VT V L K + TG KGFAF+ F+ +E+A KA
Sbjct: 255 AEEQELRDMFERFGRVTRVFLAKDRDTGLAKGFAFISFADREDAVKAC 302
>gi|307151256|ref|YP_003886640.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7822]
gi|306981484|gb|ADN13365.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7822]
Length = 97
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEF-STKEEATKALEL 73
LP E E +I +F+ YG+V V +P K TG+ +GFAFVE +T +E + EL
Sbjct: 8 LPFEVEEKHINEIFADYGQVKRVYMPVDKETGRRRGFAFVEMENTSQEDSAIAEL 62
>gi|425461431|ref|ZP_18840909.1| putative RNA-binding protein rbpB [Microcystis aeruginosa PCC
9808]
gi|389825716|emb|CCI24327.1| putative RNA-binding protein rbpB [Microcystis aeruginosa PCC
9808]
Length = 100
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 31/44 (70%)
Query: 29 IESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
++ VF++YG V+ V LP + TGK++GF FVE S+ EE A+E
Sbjct: 17 LQEVFAEYGTVSRVYLPVDRETGKMRGFGFVEMSSDEEEAIAIE 60
>gi|356561166|ref|XP_003548856.1| PREDICTED: uncharacterized protein LOC100819035 [Glycine max]
Length = 953
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 51/101 (50%), Gaps = 13/101 (12%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLNPCP 79
LPP + D++ +F YG++ + L + S+ K K + FV+FST E A ++ G+N
Sbjct: 643 LPPHWDEDHVRELFKAYGEIVRIVLARNMSSAKRKDYGFVDFSTHEAAVACVD-GVNKSE 701
Query: 80 TDYQSSILTTTSRLSFGITPL-------GFESGGWWFKSSH 113
+S + +RLS PL G SGG F+ SH
Sbjct: 702 LGDGASKIKVRARLS---NPLPKTQAVKGGMSGG--FRISH 737
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 34/59 (57%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLNPC 78
L +A + + VF + G++ V L K ST K KG+AFV+F+ KE A KAL NP
Sbjct: 465 LDRDATEEDLRKVFQRIGEIVEVRLHKNSSTNKNKGYAFVKFANKENAKKALSEMKNPV 523
>gi|428777010|ref|YP_007168797.1| RNP-1 like RNA-binding protein [Halothece sp. PCC 7418]
gi|428691289|gb|AFZ44583.1| RNP-1 like RNA-binding protein [Halothece sp. PCC 7418]
Length = 90
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 32/53 (60%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+P E + VFS+YG V V++P + TGK++GF FVE T+ + A+E
Sbjct: 1 MPYEVTEQEVNEVFSEYGTVKRVTIPVDRETGKVRGFGFVEMETESDEAPAIE 53
>gi|226481705|emb|CAX79118.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
Length = 210
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKA 70
LP HD + F +YG++ V++P TG++KG+AF+EF +A A
Sbjct: 13 LPDTCRHDDLRRCFGRYGRIVDVTIPLDFFTGRMKGYAFIEFENPRDAEDA 63
>gi|29841102|gb|AAP06115.1| similar to NM_080743 serine-arginine repressor protein (35 kDa)
in Homo sapiens [Schistosoma japonicum]
gi|226476576|emb|CAX72180.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481266|emb|CAX79098.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481268|emb|CAX79099.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481270|emb|CAX79100.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481274|emb|CAX79102.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481276|emb|CAX79103.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481278|emb|CAX79104.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481280|emb|CAX79105.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481282|emb|CAX79106.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481284|emb|CAX79107.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481286|emb|CAX79108.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481288|emb|CAX79109.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481292|emb|CAX79111.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481294|emb|CAX79112.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481300|emb|CAX79114.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481699|emb|CAX79115.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481701|emb|CAX79116.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
Length = 210
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKA 70
LP HD + F +YG++ V++P TG++KG+AF+EF +A A
Sbjct: 13 LPDTCRHDDLRRCFGRYGRIVDVTIPLDFFTGRMKGYAFIEFENPRDAEDA 63
>gi|226476570|emb|CAX72177.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481290|emb|CAX79110.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481296|emb|CAX79113.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
Length = 210
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKA 70
LP HD + F +YG++ V++P TG++KG+AF+EF +A A
Sbjct: 13 LPDTCRHDDLRRCFGRYGRIVDVTIPLDFFTGRMKGYAFIEFENPRDAEDA 63
>gi|317970365|ref|ZP_07971755.1| RNA-binding protein RbpD [Synechococcus sp. CB0205]
Length = 89
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 34/50 (68%)
Query: 23 EAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+AE + + +FS+YG+V+ SLP + TG+ +GFAFVE + + KA++
Sbjct: 11 QAEQEDLLDLFSQYGEVSKCSLPLDRETGRKRGFAFVEMANDADEQKAID 60
>gi|226481703|emb|CAX79117.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
Length = 115
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKA 70
LP HD + F +YG++ V++P TG++KG+AF+EF +A A
Sbjct: 13 LPDTCRHDDLRRCFGRYGRIVDVTIPLDFFTGRMKGYAFIEFENPRDAEDA 63
>gi|300176090|emb|CBK23401.2| unnamed protein product [Blastocystis hominis]
Length = 259
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 30/43 (69%)
Query: 29 IESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
I+++FSKYG V V +P+ T K +GFAF+EF +E+A A+
Sbjct: 118 IQNIFSKYGNVHDVHIPRDYYTHKQRGFAFIEFENREQAEDAI 160
>gi|428306262|ref|YP_007143087.1| RNP-1 like RNA-binding protein [Crinalium epipsammum PCC 9333]
gi|428247797|gb|AFZ13577.1| RNP-1 like RNA-binding protein [Crinalium epipsammum PCC 9333]
Length = 111
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 28/44 (63%)
Query: 29 IESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
I F++YG V V LP + TG+++GFAFVE T E KA+E
Sbjct: 17 ISQTFAEYGTVKRVQLPTDRETGRMRGFAFVEMETDAEEEKAIE 60
>gi|411117881|ref|ZP_11390262.1| RRM domain-containing RNA-binding protein [Oscillatoriales
cyanobacterium JSC-12]
gi|410711605|gb|EKQ69111.1| RRM domain-containing RNA-binding protein [Oscillatoriales
cyanobacterium JSC-12]
Length = 100
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
L E D + +VF++YG V V LP + TG+++GF FVE S E A++
Sbjct: 8 LSYEVTEDDLTAVFAEYGSVKRVQLPTDRETGRMRGFGFVEMSADAEEDAAID 60
>gi|449297462|gb|EMC93480.1| hypothetical protein BAUCODRAFT_37162 [Baudoinia compniacensis UAMH
10762]
Length = 296
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 32/49 (65%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
AE + +F ++G+VT V L K + TG+ KGFAFV ++ + +A +A E
Sbjct: 227 AEEQDLREIFERWGRVTRVFLAKDRETGRAKGFAFVSYADRSDAARACE 275
>gi|218441262|ref|YP_002379591.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7424]
gi|218173990|gb|ACK72723.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7424]
Length = 97
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 31/53 (58%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
L E E ++ +FS YGKVT V +P + TG+ +GFAFVE T + A+
Sbjct: 7 NLAFEVEDKHLSDIFSDYGKVTRVYMPTDRETGQRRGFAFVEMETPQMEDAAI 59
>gi|428221393|ref|YP_007105563.1| RRM domain-containing RNA-binding protein [Synechococcus sp. PCC
7502]
gi|427994733|gb|AFY73428.1| RRM domain-containing RNA-binding protein [Synechococcus sp. PCC
7502]
Length = 96
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 32/53 (60%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
L +A + + VF+ YGKV V LP + TG+++GFAFV+ + T A+E
Sbjct: 8 LSYQASQEDLMEVFNDYGKVKRVQLPTDRETGRMRGFAFVDMEEDSQETAAIE 60
>gi|78191396|gb|ABB29919.1| unknown [Solanum tuberosum]
Length = 258
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 29/41 (70%)
Query: 32 VFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+F KYGKV V +P+ + TG +GFAFV + ++EA KA+E
Sbjct: 35 LFDKYGKVVDVFIPRDRRTGDSRGFAFVRYKYQDEAQKAVE 75
>gi|221132804|ref|XP_002167622.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Hydra
magnipapillata]
Length = 161
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLN 76
+L A+ +E +F KYG V VS+ K + T + +GFAFVEF ++E+A A++ G N
Sbjct: 11 QLDYNADERDLEDLFGKYGTVVKVSIIKDRETQRPRGFAFVEFDSEEDAEAAID-GCN 67
>gi|391337026|ref|XP_003742875.1| PREDICTED: la-related protein 7-like [Metaseiulus occidentalis]
Length = 493
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 31/42 (73%), Gaps = 1/42 (2%)
Query: 29 IESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKA 70
I S+FS++G V YVSLP+ +STG KGFAFVEF+ K A A
Sbjct: 183 IRSLFSEFGMVEYVSLPR-RSTGDHKGFAFVEFAEKTGAENA 223
>gi|427706332|ref|YP_007048709.1| RNP-1 like RNA-binding protein [Nostoc sp. PCC 7107]
gi|427358837|gb|AFY41559.1| RNP-1 like RNA-binding protein [Nostoc sp. PCC 7107]
Length = 110
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 31/44 (70%)
Query: 29 IESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
++ FS+YGKV+ V LP + TG+ +GFAFVE T+ + T A+E
Sbjct: 17 LKMAFSEYGKVSRVQLPTDRETGRPRGFAFVEMETESQETAAIE 60
>gi|94967282|ref|YP_589330.1| RNA-binding protein, RNP-1 [Candidatus Koribacter versatilis
Ellin345]
gi|94549332|gb|ABF39256.1| RNA-binding protein, RNP-1 [Candidatus Koribacter versatilis
Ellin345]
Length = 107
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLN 76
A D I +F+ YGKV VSL + TG+ +GF FVE EA A+E GLN
Sbjct: 13 ATEDDIRQLFTPYGKVDSVSLVTDRDTGRARGFGFVEMPNDTEAAAAIE-GLN 64
>gi|410952831|ref|XP_003983081.1| PREDICTED: RNA-binding protein 28-like, partial [Felis catus]
Length = 302
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Query: 10 KYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATK 69
K R++++ L + D + +VF++YG V VS+P+ K GK++GFAFV+F EA K
Sbjct: 112 KKARLIIR-NLSFKCSEDDLRTVFAQYGAVLEVSIPR-KPDGKMRGFAFVQFKNLLEAGK 169
Query: 70 AL 71
AL
Sbjct: 170 AL 171
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 29/53 (54%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
+LPP A + +E +FS+ G V + K + +GF +V FS E+ +AL
Sbjct: 10 RLPPSARSEQLEELFSQVGPVKQCFVVTEKGSKACRGFGYVTFSMLEDVQRAL 62
>gi|443723982|gb|ELU12200.1| hypothetical protein CAPTEDRAFT_225018 [Capitella teleta]
Length = 891
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 15 VLKEKLPPEAEHDYIESVFSKYGKVTYVSLP-KFKSTGKLKGFAFVEFSTKEEATKALE 72
+L +P EA+ D ++ +FS +G++ LP K +G+ +GFAFV+F +KE+A +A +
Sbjct: 770 ILVRNIPFEAKQDEVKQLFSVFGELKTARLPRKLAGSGQHRGFAFVDFLSKEDAQRAFD 828
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 3 ELVENNKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFS 62
E E+ + GR+ ++ L + D +E +F+KYG ++ V LP T K+KGFAFV F
Sbjct: 356 EECEDIAESGRLYVRN-LAYCCKEDDLEQLFTKYGTLSEVHLPIDSFTKKVKGFAFVSFM 414
Query: 63 TKEEATKALE 72
E A KA +
Sbjct: 415 FPEHAVKAFQ 424
>gi|357631053|gb|EHJ78771.1| hypothetical protein KGM_03904 [Danaus plexippus]
Length = 591
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 3 ELVENNKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFS 62
E+ E K+Y R+ + + PE D I++VF +G +TY L S K KG+ F+E++
Sbjct: 229 EIQEEAKQYNRIYVAS-IHPELTEDDIKNVFEAFGPITYCKLAYGASAHKHKGYGFIEYA 287
Query: 63 TKEEATKAL 71
T A +A+
Sbjct: 288 TLPAALEAI 296
Score = 35.0 bits (79), Expect = 5.6, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 26/50 (52%)
Query: 23 EAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
E + D I F +G + +++ T K KGFAFVE+ E A +LE
Sbjct: 150 ELKEDTIRQAFLPFGPIKSINMSWDPVTQKHKGFAFVEYEIPEAAQLSLE 199
>gi|378776211|ref|YP_005184641.1| RNA binding protein, cold-inducible rrm [Legionella pneumophila
subsp. pneumophila ATCC 43290]
gi|364507018|gb|AEW50542.1| RNA binding protein, cold-inducible rrm [Legionella pneumophila
subsp. pneumophila ATCC 43290]
Length = 112
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 11 YGRVVLKEK------LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTK 64
Y ++K+K LP + + FS+YGK+ + L K + TG++KGF F+ FS +
Sbjct: 17 YSGAMMKQKKIYVGNLPFGTTEEALSIQFSQYGKIEEMFLIKDRLTGQMKGFGFITFSAQ 76
Query: 65 EEATKALELGLNP 77
+EA ALE+ P
Sbjct: 77 QEAESALEMNGQP 89
>gi|224488073|sp|A8WLV5.2|EIF3G_CAEBR RecName: Full=Eukaryotic translation initiation factor 3 subunit G;
Short=eIF3g; AltName: Full=Eukaryotic translation
initiation factor 3 RNA-binding subunit; Short=eIF-3
RNA-binding subunit; AltName: Full=Eukaryotic
translation initiation factor 3 subunit 4
Length = 261
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%)
Query: 5 VENNKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTK 64
+E N+ LP E D + VF + G+V + + + K TG KGFAFV F ++
Sbjct: 173 MERNRSDENTCRVTNLPQEMNEDELRDVFGRIGRVIRIFIARDKITGLPKGFAFVTFESR 232
Query: 65 EEATKAL 71
++A +A+
Sbjct: 233 DDAARAI 239
>gi|434398120|ref|YP_007132124.1| RNP-1 like RNA-binding protein [Stanieria cyanosphaera PCC 7437]
gi|428269217|gb|AFZ35158.1| RNP-1 like RNA-binding protein [Stanieria cyanosphaera PCC 7437]
Length = 96
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 30/44 (68%)
Query: 29 IESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+ VF++YG V V LP + TG+++GFAFVE T+ E KA++
Sbjct: 17 LTDVFAEYGSVKRVHLPTDRDTGRVRGFAFVEMGTEAEEDKAID 60
>gi|341896316|gb|EGT52251.1| CBN-RNP-4 protein [Caenorhabditis brenneri]
Length = 143
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 37/61 (60%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
G +V + EA D + FS++GK+ + L + TG LKG+A VE+ T++EA +A+
Sbjct: 54 GWIVFVTNIHEEATEDDVHDKFSEFGKIKNIHLNLDRRTGFLKGYALVEYETQKEANEAI 113
Query: 72 E 72
E
Sbjct: 114 E 114
>gi|352093687|ref|ZP_08954858.1| RNP-1 like RNA-binding protein [Synechococcus sp. WH 8016]
gi|351680027|gb|EHA63159.1| RNP-1 like RNA-binding protein [Synechococcus sp. WH 8016]
Length = 118
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 23 EAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+AE + + +F +YG+V SLP + TG+ +GF FVE +T E+ KA++
Sbjct: 11 QAEQEDLLDLFGQYGEVKSASLPLDRETGRKRGFGFVEMATDEDEQKAID 60
>gi|113953042|ref|YP_730260.1| RNA-binding protein [Synechococcus sp. CC9311]
gi|113880393|gb|ABI45351.1| putative RNA-binding protein [Synechococcus sp. CC9311]
Length = 126
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 23 EAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+AE + + +F +YG+V SLP + TG+ +GF FVE +T E+ KA++
Sbjct: 11 QAEQEDLLDLFGQYGEVKSASLPLDRETGRKRGFGFVEMATDEDEQKAID 60
>gi|428210908|ref|YP_007084052.1| RRM domain-containing RNA-binding protein [Oscillatoria acuminata
PCC 6304]
gi|427999289|gb|AFY80132.1| RRM domain-containing RNA-binding protein [Oscillatoria acuminata
PCC 6304]
Length = 109
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%)
Query: 29 IESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+ SVF++YG V V+LP + TG+ +GF FVE T E T A+E
Sbjct: 17 LNSVFAEYGTVKRVNLPTDRETGRPRGFGFVEMDTDAEETAAIE 60
>gi|4850347|dbj|BAA77714.1| RNA-binding protein [Anabaena variabilis]
Length = 103
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 26 HDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
D + VF++YG V V LP + TG+++GF FVE + E T A+E
Sbjct: 14 EDSLNPVFAEYGSVKRVQLPTDRETGRMRGFGFVEMGSDAEETAAIE 60
>gi|333999539|ref|YP_004532151.1| RNA-binding protein [Treponema primitia ZAS-2]
gi|333738431|gb|AEF83921.1| RNA-binding protein [Treponema primitia ZAS-2]
Length = 89
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 26 HDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLNPCPTDYQS 84
D + ++FS+YG V V + + TG KGF FVE ST+EEA A+ G N D +S
Sbjct: 16 EDNLRTLFSQYGTVESVKIITDRDTGNSKGFGFVEMSTEEEAQAAIR-GTNSTDLDGRS 73
>gi|254414476|ref|ZP_05028242.1| RNA-binding protein, putative [Coleofasciculus chthonoplastes PCC
7420]
gi|196178706|gb|EDX73704.1| RNA-binding protein, putative [Coleofasciculus chthonoplastes PCC
7420]
Length = 96
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
L +A D +++VF+ YG V V LP + TG+++GFAFVE + + + A+
Sbjct: 7 NLSYQATEDDLQTVFADYGTVKRVVLPTDRETGRVRGFAFVEMTDEAQEESAI 59
>gi|254572962|ref|XP_002493590.1| Nucleolar protein that binds nuclear localization sequences
[Komagataella pastoris GS115]
gi|238033389|emb|CAY71411.1| Nucleolar protein that binds nuclear localization sequences
[Komagataella pastoris GS115]
gi|328354581|emb|CCA40978.1| Nuclear localization sequence-binding protein [Komagataella
pastoris CBS 7435]
Length = 362
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 34/50 (68%)
Query: 23 EAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+A+ D + +FSK+G VT V +P T + KGF +V+FS+ +EAT ALE
Sbjct: 239 QADRDTLFELFSKHGNVTSVRIPTHPETEQPKGFGYVQFSSVDEATGALE 288
>gi|256048769|ref|XP_002569484.1| hypothetical protein [Schistosoma mansoni]
gi|350646523|emb|CCD58833.1| hypothetical protein Smp_192360 [Schistosoma mansoni]
Length = 168
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLN 76
LPP+ D ++SVFS +G V + K K T + +GFAF+ F T EEA A+ G+N
Sbjct: 98 LPPDTTADELKSVFSAFGHVMRIYPAKDKLTQQNRGFAFISFRTAEEAKSAI-YGVN 153
>gi|378726539|gb|EHY52998.1| eukaryotic translation initiation factor 3 subunit G [Exophiala
dermatitidis NIH/UT8656]
Length = 297
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
AE + +F ++G+VT V L K + TG+ KGFAF+ F + +A +A E
Sbjct: 228 AEEQELRDLFERFGRVTRVFLAKDRDTGRAKGFAFISFVDRADAARACE 276
>gi|397662818|ref|YP_006504356.1| RNA binding protein, cold-inducible rrm [Legionella pneumophila
subsp. pneumophila]
gi|395126229|emb|CCD04410.1| RNA binding protein, cold-inducible rrm [Legionella pneumophila
subsp. pneumophila]
Length = 91
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLNPCP 79
LP + + FS+YGK+ + L K + TG++KGF F+ FS ++EA ALE +N P
Sbjct: 11 LPFGTTEEALSIQFSQYGKIEEMFLIKDRLTGQMKGFGFITFSAQQEAESALE--MNGQP 68
Query: 80 TDYQSSILTTTSR 92
D +S + R
Sbjct: 69 FDGRSLKVCMAQR 81
>gi|268530192|ref|XP_002630222.1| C. briggsae CBR-EIF-3.G.1 protein [Caenorhabditis briggsae]
gi|268570827|ref|XP_002648625.1| C. briggsae CBR-EIF-3.G.2 protein [Caenorhabditis briggsae]
Length = 255
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%)
Query: 5 VENNKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTK 64
+E N+ LP E D + VF + G+V + + + K TG KGFAFV F ++
Sbjct: 167 MERNRSDENTCRVTNLPQEMNEDELRDVFGRIGRVIRIFIARDKITGLPKGFAFVTFESR 226
Query: 65 EEATKAL 71
++A +A+
Sbjct: 227 DDAARAI 233
>gi|348677689|gb|EGZ17506.1| hypothetical protein PHYSODRAFT_501188 [Phytophthora sojae]
Length = 293
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 34/58 (58%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKA 70
R V ++LP E E I + G +T V LP + T KLKGF +VEFS+++EA A
Sbjct: 169 RTVFIKQLPYEVEEGTIREALASCGTITSVRLPIWNHTKKLKGFGYVEFSSEDEALAA 226
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 36/68 (52%)
Query: 6 ENNKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKE 65
E ++K V E +P A + + FS G V V +P+++ +GK +G+A V F +
Sbjct: 61 EIDRKTEATVYVEGIPYRANEGDLVTHFSSCGTVREVRMPRYQDSGKPRGYAHVVFDDEA 120
Query: 66 EATKALEL 73
KAL+L
Sbjct: 121 ALKKALKL 128
>gi|198438463|ref|XP_002129865.1| PREDICTED: similar to La ribonucleoprotein domain family, member 7
[Ciona intestinalis]
Length = 508
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKA 70
LPP+A +++ + K G Y+SLP+ + G +KGF F+EFS EEA A
Sbjct: 119 LPPDATIAWLKGICKKLGTAKYISLPR-QQNGSIKGFCFIEFSCPEEALTA 168
>gi|320585738|gb|EFW98417.1| eukaryotic translation initiation factor 3 subunit [Grosmannia
clavigera kw1407]
Length = 311
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
AE + +F ++G+VT V L K + TG KGFAFV F+ + +A KA E
Sbjct: 242 AEEQELRDMFERFGRVTRVFLAKDRDTGLAKGFAFVSFADRTDAEKACE 290
>gi|428210291|ref|YP_007094644.1| RNP-1 like RNA-binding protein [Chroococcidiopsis thermalis PCC
7203]
gi|428012212|gb|AFY90775.1| RNP-1 like RNA-binding protein [Chroococcidiopsis thermalis PCC
7203]
Length = 101
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%)
Query: 29 IESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+ + F++YG V V LP + TG+++GFAFVE T E T A++
Sbjct: 17 LSAAFAQYGSVKRVQLPTDRETGRVRGFAFVEMDTDAEETTAID 60
>gi|116779573|gb|ABK21345.1| unknown [Picea sitchensis]
gi|224285462|gb|ACN40453.1| unknown [Picea sitchensis]
Length = 198
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 31/44 (70%)
Query: 29 IESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+++ FS YGKV V + K+T + KGF FVEFST+EEA AL+
Sbjct: 104 LQNAFSNYGKVVDVRIIMNKTTRRSKGFGFVEFSTEEEANTALK 147
>gi|297789035|ref|XP_002862530.1| hypothetical protein ARALYDRAFT_920582 [Arabidopsis lyrata subsp.
lyrata]
gi|297308107|gb|EFH38788.1| hypothetical protein ARALYDRAFT_920582 [Arabidopsis lyrata subsp.
lyrata]
Length = 116
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 32/46 (69%)
Query: 27 DYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
D + +F+KYGKV V +P+ + TG +GFAFV + K+EA KA+E
Sbjct: 30 DDLYPLFAKYGKVVDVFIPRDRRTGDSRGFAFVRYKYKDEAHKAVE 75
>gi|241358219|ref|XP_002408846.1| RNA recognition motif-containing protein [Ixodes scapularis]
gi|215497412|gb|EEC06906.1| RNA recognition motif-containing protein [Ixodes scapularis]
Length = 662
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Query: 3 ELVENNKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFS 62
E + K+ R++++ L +A + F KYG + VS+PK K GK++GFAFV+F+
Sbjct: 109 ERLARKKRKPRLIVR-NLSFKANETVLRDCFGKYGDLVEVSIPK-KPDGKMRGFAFVQFA 166
Query: 63 TKEEATKALELGLN 76
+ A KA+ GLN
Sbjct: 167 ETKSAIKAIN-GLN 179
>gi|326507886|dbj|BAJ86686.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 751
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 1 MAELVENNKKYGRV-VLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFV 59
M+++ +N ++ + + L EA + I VFS+ G V V L K ST K KGFAFV
Sbjct: 231 MSDMAKNRQRKKELEIFVGGLDREAVEEDIRKVFSQVGDVVEVRLHKDFSTSKNKGFAFV 290
Query: 60 EFSTKEEATKALELGLNP 77
F+ KE+ +AL NP
Sbjct: 291 RFANKEQVARALAEMKNP 308
Score = 41.6 bits (96), Expect = 0.066, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 38/82 (46%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+ V LPP + + +++ F YG + V L + S+ K F FV FST EEA +E
Sbjct: 422 KSVFINGLPPYWDEERVKNRFKAYGLIERVVLARNMSSAKRNDFGFVNFSTHEEALACIE 481
Query: 73 LGLNPCPTDYQSSILTTTSRLS 94
N D + L RLS
Sbjct: 482 ATNNTELGDDGKAKLKVRVRLS 503
>gi|401399856|ref|XP_003880652.1| probable RNA-binding protein 19, related [Neospora caninum Liverpool]
gi|325115063|emb|CBZ50619.1| probable RNA-binding protein 19, related [Neospora caninum Liverpool]
Length = 1099
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Query: 15 VLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
VL + L +A + +FS YG VT V +P+ + G+ +GFAFV+F+TK+EA A++
Sbjct: 1015 VLVKNLAFQASASDLRGLFSAYGNVTRVCIPR-QHEGRSRGFAFVDFATKQEAQNAVD 1071
>gi|126658060|ref|ZP_01729212.1| RNA-binding region RNP-1 [Cyanothece sp. CCY0110]
gi|126620698|gb|EAZ91415.1| RNA-binding region RNP-1 [Cyanothece sp. CCY0110]
Length = 94
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%)
Query: 29 IESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+E VF++YG V V +P + TGK +GF FVE T+ E T A+E
Sbjct: 17 LEQVFAEYGTVKRVQIPSDRETGKSRGFGFVEMGTETEETAAIE 60
>gi|443478888|ref|ZP_21068579.1| RNP-1 like RNA-binding protein [Pseudanabaena biceps PCC 7429]
gi|443015762|gb|ELS30586.1| RNP-1 like RNA-binding protein [Pseudanabaena biceps PCC 7429]
Length = 109
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 35/52 (67%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
L E D +++VFS+YGK+T V LP + +G+ +GFAFVE + ++E A+
Sbjct: 8 LSYEVTEDDLKAVFSEYGKITRVHLPIDRESGRPRGFAFVEMTEEKEEDAAI 59
>gi|403366460|gb|EJY83033.1| La-related protein 7 [Oxytricha trifallax]
Length = 500
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 18 EKLPPEA-EHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALEL 73
EK P +A + + + +F + GK+ V +P++ +G KGFAFVE+S+ EEA A+E+
Sbjct: 225 EKFPVKAMDIEKMTFIFKRAGKIINVQMPRYPKSGLPKGFAFVEYSSPEEAQHAVEM 281
>gi|78184555|ref|YP_376990.1| RNA-binding region RNP-1 [Synechococcus sp. CC9902]
gi|78168849|gb|ABB25946.1| RNA-binding region RNP-1 [Synechococcus sp. CC9902]
Length = 81
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 34/50 (68%)
Query: 23 EAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+AE + + +FS+YG+V+ S+P + TG+ +GFAFV+ EE KA++
Sbjct: 11 DAEREDLIHLFSQYGEVSKCSMPLDRETGRKRGFAFVDLGNAEEEKKAID 60
>gi|407924097|gb|EKG17155.1| hypothetical protein MPH_05609 [Macrophomina phaseolina MS6]
Length = 281
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 31/48 (64%)
Query: 25 EHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
E + +FS++G VT V L K + TG+ KGFAFV F+ +++A A E
Sbjct: 213 EEQDLRDIFSRFGHVTRVFLAKDRETGRAKGFAFVSFADRDDAKTACE 260
>gi|428304645|ref|YP_007141470.1| RNP-1 like RNA-binding protein [Crinalium epipsammum PCC 9333]
gi|428246180|gb|AFZ11960.1| RNP-1 like RNA-binding protein [Crinalium epipsammum PCC 9333]
Length = 103
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 26 HDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
D + F++YG V V LP + TG+++GF FVE S+ E T A++
Sbjct: 14 QDDLSQAFAEYGTVKSVQLPTDRETGRMRGFGFVEMSSDAEETAAID 60
>gi|124808101|ref|XP_001348230.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
gi|23497120|gb|AAN36669.1|AE014816_54 RNA binding protein, putative [Plasmodium falciparum 3D7]
Length = 107
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 38/61 (62%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
G +++ + EA DYI+ VF ++G++ + L + TG LKG+AF+E+ +A +A+
Sbjct: 22 GWIIIITNIHGEARDDYIKEVFERFGQIKNLHLNIDRRTGFLKGYAFLEYENFVDAKRAI 81
Query: 72 E 72
+
Sbjct: 82 D 82
>gi|66809481|ref|XP_638463.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|74996868|sp|Q54PB2.1|MRD1_DICDI RecName: Full=Multiple RNA-binding domain-containing protein 1;
AltName: Full=RNA-binding motif protein 19 homolog;
AltName: Full=RNA-binding protein 19 homolog
gi|60467060|gb|EAL65101.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 895
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
Query: 8 NKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEA 67
NK ++++K LP E+ I +F+ YG++ V +PK K G +GF FVEF T+EEA
Sbjct: 791 NKPSSKIIIKN-LPFESTIKEIRKLFTAYGEIQSVRIPK-KPNGGHRGFGFVEFLTEEEA 848
Query: 68 TKALE 72
A+E
Sbjct: 849 KNAME 853
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
GR+ ++ E D +E VFSK+GK++ + +P + K KG AF+ + E A +AL
Sbjct: 361 GRIFVRNLSYSTKEED-LEKVFSKFGKISEIHIPIDYDSKKSKGIAFILYLIPENAVQAL 419
>gi|402594614|gb|EJW88540.1| RNA-binding protein 8A [Wuchereria bancrofti]
Length = 159
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
G +V + EA D + FS+YG++ ++L + TG LKG+A VE+ T++EA A+
Sbjct: 70 GWIVFVTNVHEEAHEDDVYERFSEYGEIKNMNLNIDRRTGFLKGYALVEYETQKEALSAI 129
Query: 72 ELGLN 76
E GLN
Sbjct: 130 E-GLN 133
>gi|124022676|ref|YP_001016983.1| RNA-binding protein RbpD [Prochlorococcus marinus str. MIT 9303]
gi|123962962|gb|ABM77718.1| RNA-binding protein RbpD [Prochlorococcus marinus str. MIT 9303]
Length = 104
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 23 EAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+AE + + +FS+YG+V SLP + TG+ +GFAFVE + + KA++
Sbjct: 11 QAEQEDLLDLFSQYGEVKTCSLPLDRETGRKRGFAFVEMANDADEQKAID 60
>gi|52840506|ref|YP_094305.1| RNA binding protein, cold-inducible rrm [Legionella pneumophila
subsp. pneumophila str. Philadelphia 1]
gi|52627617|gb|AAU26358.1| RNA binding protein, cold-inducible rrm [Legionella pneumophila
subsp. pneumophila str. Philadelphia 1]
Length = 92
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLNP 77
LP + + FS+YGK+ + L K + TG++KGF F+ FS ++EA ALE+ P
Sbjct: 12 LPFGTTEEALSIQFSQYGKIEEMFLIKDRLTGQMKGFGFITFSAQQEAESALEMNGQP 69
>gi|365986018|ref|XP_003669841.1| hypothetical protein NDAI_0D02840 [Naumovozyma dairenensis CBS 421]
gi|343768610|emb|CCD24598.1| hypothetical protein NDAI_0D02840 [Naumovozyma dairenensis CBS 421]
Length = 426
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 31/49 (63%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
A+ D I FSKYG++ V +P T + KGF +V+FS E+A KALE
Sbjct: 281 ADKDNIYETFSKYGEIISVRIPTHPETEQPKGFGYVQFSNIEDAKKALE 329
>gi|33863352|ref|NP_894912.1| RNA-binding protein RbpD [Prochlorococcus marinus str. MIT 9313]
gi|33640801|emb|CAE21256.1| RNA-binding protein RbpD [Prochlorococcus marinus str. MIT 9313]
Length = 111
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 34/53 (64%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
L +AE + + +FS+YG+V SLP + TG+ +GFAFVE + + KA++
Sbjct: 8 LSFQAEQEDLLDLFSQYGEVKTCSLPLDRETGRKRGFAFVEMTNDADEQKAID 60
>gi|148358462|ref|YP_001249669.1| RNA binding protein [Legionella pneumophila str. Corby]
gi|296105810|ref|YP_003617510.1| RNA binding protein, cold-inducible rrm [Legionella pneumophila
2300/99 Alcoy]
gi|397665933|ref|YP_006507470.1| Cold-inducible RNA-binding protein (Glycine-rich RNA-binding
protein CIRP) (A18 hnRNP) [Legionella pneumophila
subsp. pneumophila]
gi|148280235|gb|ABQ54323.1| RNA binding protein, cold-inducible rrm [Legionella pneumophila
str. Corby]
gi|295647711|gb|ADG23558.1| RNA binding protein, cold-inducible rrm [Legionella pneumophila
2300/99 Alcoy]
gi|395129344|emb|CCD07574.1| Cold-inducible RNA-binding protein (Glycine-rich RNA-binding
protein CIRP) (A18 hnRNP) [Legionella pneumophila
subsp. pneumophila]
Length = 91
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLNP 77
LP + + FS+YGK+ + L K + TG++KGF F+ FS ++EA ALE+ P
Sbjct: 11 LPFGTTEEALSIQFSQYGKIEEMFLIKDRLTGQMKGFGFITFSAQQEAESALEMNGQP 68
>gi|326476993|gb|EGE01003.1| nucleolin protein Nsr1 [Trichophyton equinum CBS 127.97]
Length = 479
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 33/49 (67%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
A+ + ++ +FSKYG + + LP +G+ KGF +V+FS+ +EA ALE
Sbjct: 355 ADENMVQELFSKYGTIQGIRLPTDPDSGRPKGFGYVQFSSVDEARAALE 403
>gi|403333763|gb|EJY66002.1| La-related protein 7 [Oxytricha trifallax]
Length = 500
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 18 EKLPPEA-EHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALEL 73
EK P +A + + + +F + GK+ V +P++ +G KGFAFVE+S+ EEA A+E+
Sbjct: 225 EKFPVKAMDIEKMTFIFKRAGKIINVQMPRYPKSGLPKGFAFVEYSSPEEAQHAVEM 281
>gi|54296292|ref|YP_122661.1| hypothetical protein lpp0321 [Legionella pneumophila str. Paris]
gi|53750077|emb|CAH11469.1| hypothetical protein lpp0321 [Legionella pneumophila str. Paris]
Length = 91
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLNP 77
LP + + FS+YGK+ + L K + TG++KGF F+ FS ++EA ALE+ P
Sbjct: 11 LPFGTTEEALSIQFSQYGKIEEMFLIKDRLTGQMKGFGFITFSAQQEAESALEMNGQP 68
>gi|88808896|ref|ZP_01124405.1| RNA-binding protein RbpD [Synechococcus sp. WH 7805]
gi|88786838|gb|EAR17996.1| RNA-binding protein RbpD [Synechococcus sp. WH 7805]
Length = 115
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 34/50 (68%)
Query: 23 EAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+AE + + +FS+YG+V SLP + TG+ +GF FVE ++ ++ KA++
Sbjct: 11 QAEQEDLLDLFSQYGEVKSASLPLDRETGRKRGFGFVEMNSDQDEQKAID 60
>gi|428779944|ref|YP_007171730.1| RRM domain-containing RNA-binding protein [Dactylococcopsis
salina PCC 8305]
gi|428694223|gb|AFZ50373.1| RRM domain-containing RNA-binding protein [Dactylococcopsis
salina PCC 8305]
Length = 95
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 12/72 (16%)
Query: 26 HDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL-----------ELG 74
D + VF++YG V V LP + TG+++GF FVE +++ E + A+ EL
Sbjct: 14 QDDLSEVFAEYGTVKRVHLPTDRETGRMRGFGFVEMASETEESNAISELDGAEWMGRELK 73
Query: 75 LNPC-PTDYQSS 85
+NP P + +SS
Sbjct: 74 VNPARPRENKSS 85
>gi|157870420|ref|XP_001683760.1| poly(A)-binding protein 3 [Leishmania major strain Friedlin]
gi|68126827|emb|CAJ04400.1| poly(A)-binding protein 3 [Leishmania major strain Friedlin]
Length = 544
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 9 KKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAT 68
+ +GR + + LP + D + +F +GK+T ++ K + G LKGFAFV F K+ A+
Sbjct: 285 QNHGRNLYIKHLPDDITDDRLREIFEPFGKITSCAIMK-EPNGTLKGFAFVCFEDKQHAS 343
Query: 69 KALELGLNPCPTDYQSSIL 87
AL LN P ++ + L
Sbjct: 344 AALR-SLNGHPLEHSAKPL 361
>gi|308509216|ref|XP_003116791.1| CRE-EIF-3.G protein [Caenorhabditis remanei]
gi|308241705|gb|EFO85657.1| CRE-EIF-3.G protein [Caenorhabditis remanei]
Length = 260
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
LP E D + VF + G+V + + + K TG KGFAFV F ++++A +A+
Sbjct: 187 LPQEMNEDELRDVFGRIGRVIRIFIARDKITGLPKGFAFVTFESRDDAARAI 238
>gi|118484490|gb|ABK94120.1| unknown [Populus trichocarpa]
Length = 302
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 29/41 (70%)
Query: 32 VFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+F KYGKV V +P+ + TG+ +GFAFV + EEA KA++
Sbjct: 35 LFDKYGKVVDVFIPRDRRTGESRGFAFVRYKYAEEAQKAVD 75
>gi|326472146|gb|EGD96155.1| nucleolin protein Nsr1 [Trichophyton tonsurans CBS 112818]
Length = 479
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 33/49 (67%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
A+ + ++ +FSKYG + + LP +G+ KGF +V+FS+ +EA ALE
Sbjct: 355 ADENMVQELFSKYGTIQGIRLPTDPDSGRPKGFGYVQFSSVDEARAALE 403
>gi|254410328|ref|ZP_05024107.1| RNA-binding protein, putative [Coleofasciculus chthonoplastes PCC
7420]
gi|196182534|gb|EDX77519.1| RNA-binding protein, putative [Coleofasciculus chthonoplastes PCC
7420]
Length = 95
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%)
Query: 29 IESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+ +VF+ YG V V LP + TG+ +GF FVE T +E T A+E
Sbjct: 17 LSAVFADYGAVKRVQLPTDRETGRPRGFGFVEMETDDEETAAIE 60
>gi|170078237|ref|YP_001734875.1| RNA-binding protein [Synechococcus sp. PCC 7002]
gi|169885906|gb|ACA99619.1| RNA-binding protein [Synechococcus sp. PCC 7002]
Length = 95
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 31/44 (70%)
Query: 29 IESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
++ F++YGKV V +P + TG+ +GFAFVE S+++E A+E
Sbjct: 17 LKETFAEYGKVNRVQVPTDRETGRPRGFAFVEMSSEDEENAAIE 60
>gi|402085655|gb|EJT80553.1| polyadenylate-binding protein [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 773
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 21/46 (45%), Positives = 32/46 (69%)
Query: 27 DYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
D ++F K+G VT SL + + TGK +GF FV F++ E+A+KA+E
Sbjct: 256 DDFRALFEKFGHVTSSSLARDQETGKSRGFGFVNFTSHEDASKAVE 301
>gi|321479211|gb|EFX90167.1| hypothetical protein DAPPUDRAFT_300177 [Daphnia pulex]
Length = 612
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 3 ELVENNKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFS 62
E++E ++ Y R+ + P E D I+SVF +GK+ L + + GK +G+ F+E+
Sbjct: 208 EIMEESRHYNRIFIASVHPDLTEED-IKSVFEAFGKIKMCQLAQGPAPGKHRGYGFIEYE 266
Query: 63 TKEEATKAL 71
T + A A+
Sbjct: 267 TTQSAHDAI 275
Score = 34.3 bits (77), Expect = 8.7, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 25/50 (50%)
Query: 23 EAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
E D + F +G + +++ T K KGFAFVE+ E A ALE
Sbjct: 130 ELREDTVRQSFHPFGPIKSITMSWDPITQKHKGFAFVEYELPEAAQLALE 179
>gi|427702145|ref|YP_007045367.1| RRM domain-containing RNA-binding protein [Cyanobium gracile PCC
6307]
gi|427345313|gb|AFY28026.1| RRM domain-containing RNA-binding protein [Cyanobium gracile PCC
6307]
Length = 112
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 36/50 (72%)
Query: 23 EAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+AE + ++++F++YG++ +LP + TG+ +GFAFVE + + TKA++
Sbjct: 11 DAEVEDVKNLFAQYGELRQCTLPLDRDTGRKRGFAFVEMTNDADETKAID 60
>gi|403345740|gb|EJY72251.1| La-related protein 7 [Oxytricha trifallax]
Length = 489
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 18 EKLPPEA-EHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALEL 73
EK P +A + + + +F + GK+ V +P++ +G KGFAFVE+S+ EEA A+E+
Sbjct: 225 EKFPVKAMDIEKMTFIFKRAGKIINVQMPRYPKSGLPKGFAFVEYSSPEEAQHAVEM 281
>gi|359460000|ref|ZP_09248563.1| RNA-binding protein [Acaryochloris sp. CCMEE 5410]
Length = 95
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 32/54 (59%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
L + + + + FS+YG V V LP + TGK++GF FVE S+ E KA++
Sbjct: 7 NLSYDVTEENLSTAFSEYGTVKLVKLPTDRETGKMRGFGFVEMSSDAEEAKAID 60
>gi|356502130|ref|XP_003519874.1| PREDICTED: uncharacterized protein LOC100784338 [Glycine max]
Length = 884
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+ V LPP + D++ +F YG+V + L + S+ K K + FV+FST E A ++
Sbjct: 567 KSVFINGLPPHWDEDHVRELFKSYGEVVRIVLARNMSSAKRKDYGFVDFSTHEAAVACVD 626
Query: 73 LGLNPCPTDYQSSILTTTSRLS 94
G+N +S + +RLS
Sbjct: 627 -GVNKSELGDGASKIKVRARLS 647
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 34/58 (58%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLNP 77
L +A + + VF + G++ V L K ST K KG+AFV+FS KE A KAL NP
Sbjct: 396 LDRDATEEDLRKVFQRIGEIVEVRLHKNSSTNKNKGYAFVKFSDKEHAKKALSEMKNP 453
>gi|147803493|emb|CAN64286.1| hypothetical protein VITISV_002726 [Vitis vinifera]
Length = 837
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 37/58 (63%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLNP 77
L +AE + ++ VF + G+V V L K S+ K KG+AFV+F+ KE A++AL NP
Sbjct: 333 LDRDAEEEDVKKVFERIGEVVEVRLHKNLSSNKNKGYAFVKFANKEHASRALSEMKNP 390
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 32/60 (53%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+ V + LPP + D + F YG++ + L + ST K K F FV+F+T E A ++
Sbjct: 504 KSVFVDGLPPHWDEDRVREQFKGYGEIERIVLARNMSTAKRKDFGFVDFTTHEAALSCID 563
>gi|302507033|ref|XP_003015473.1| hypothetical protein ARB_06599 [Arthroderma benhamiae CBS 112371]
gi|291179045|gb|EFE34833.1| hypothetical protein ARB_06599 [Arthroderma benhamiae CBS 112371]
Length = 479
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 33/49 (67%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
A+ + ++ +FSKYG + + LP +G+ KGF +V+FS+ +EA ALE
Sbjct: 355 ADENMVQELFSKYGAIQGIRLPTDPESGRPKGFGYVQFSSVDEARAALE 403
>gi|428225351|ref|YP_007109448.1| RNP-1 like RNA-binding protein [Geitlerinema sp. PCC 7407]
gi|427985252|gb|AFY66396.1| RNP-1 like RNA-binding protein [Geitlerinema sp. PCC 7407]
Length = 108
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
L +A + + S+F++YG V V LP + TG+++GF FVE S+ E A++
Sbjct: 8 LSYQATEEDVSSIFAEYGTVKRVQLPTDRETGRMRGFGFVEMSSDAEELAAID 60
>gi|78184977|ref|YP_377412.1| RNA-binding region RNP-1 [Synechococcus sp. CC9902]
gi|116072453|ref|ZP_01469720.1| RNA-binding region RNP-1 [Synechococcus sp. BL107]
gi|78169271|gb|ABB26368.1| RNA-binding region RNP-1 [Synechococcus sp. CC9902]
gi|116064975|gb|EAU70734.1| RNA-binding region RNP-1 [Synechococcus sp. BL107]
Length = 95
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 33/50 (66%)
Query: 23 EAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+AE +++ +F++YG+V SLP + TG+ +GFAFVE + KA++
Sbjct: 11 QAEQEHLSDLFAEYGEVKNCSLPLDRETGRKRGFAFVEMVNDADEQKAID 60
>gi|453231816|ref|NP_001263666.1| Protein EIF-3.G, isoform a [Caenorhabditis elegans]
gi|413001245|emb|CCO25605.1| Protein EIF-3.G, isoform a [Caenorhabditis elegans]
Length = 262
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 36/67 (53%)
Query: 5 VENNKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTK 64
++ N+ LP E D + +F K G+V + + + K TG KGFAFV F ++
Sbjct: 174 IDRNRSDENTCRVTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESR 233
Query: 65 EEATKAL 71
++A +A+
Sbjct: 234 DDAARAI 240
>gi|260221864|emb|CBA30852.1| Putative RNA-binding protein rbpB [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 124
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLNPC 78
LP D ++S FS++G+VT + + TG+ KGFAFVE ST A A++ GLN
Sbjct: 35 NLPYSVTDDSLQSNFSEFGEVTSAKVMMDRDTGRSKGFAFVEMSTPAFAQAAID-GLNGQ 93
Query: 79 PTDYQSSILT 88
D +S ++
Sbjct: 94 SVDGRSIVVN 103
>gi|255073543|ref|XP_002500446.1| predicted protein [Micromonas sp. RCC299]
gi|226515709|gb|ACO61704.1| predicted protein [Micromonas sp. RCC299]
Length = 113
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 7/87 (8%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
G +VL + EA+ D + F+ YG++ + L + TG +KG+A +E+ TK+EA A+
Sbjct: 28 GWIVLVTGVHEEAQEDDLHEHFADYGEIRNMHLNLDRRTGFVKGYALIEYETKKEAQAAI 87
Query: 72 ELGLNPCPTDYQSSILTTTSRLSFGIT 98
+ G N SS+L T +SF +
Sbjct: 88 D-GANG------SSMLDQTLEVSFAFS 107
>gi|429329604|gb|AFZ81363.1| RNA recognition motif domain-containing protein [Babesia equi]
Length = 494
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 34/52 (65%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
L P+ + + I ++FS +G++T + +P+ ST K KG+ FVE+ KE A A+
Sbjct: 159 LDPDVKEEDIRTIFSSFGEITCIEMPRDPSTNKSKGYCFVEYRKKESADVAI 210
>gi|426402318|ref|YP_007021289.1| RNA-binding protein [Bdellovibrio bacteriovorus str. Tiberius]
gi|425858986|gb|AFY00022.1| RNA-binding protein [Bdellovibrio bacteriovorus str. Tiberius]
Length = 104
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
G+ + L + D + VF+++G V V++ + TG+ KGFAFVE ST+ EA A+
Sbjct: 2 GKKIYVGNLSFNVDQDQLNQVFAEFGTVDTVNVITDRETGRSKGFAFVEMSTETEARAAI 61
Query: 72 E 72
E
Sbjct: 62 E 62
>gi|296805886|ref|XP_002843767.1| ribonucleoprotein [Arthroderma otae CBS 113480]
gi|238845069|gb|EEQ34731.1| ribonucleoprotein [Arthroderma otae CBS 113480]
Length = 471
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 35/53 (66%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
LP A+ + ++ +FSK+G + + LP +G+ KGF +V+FS+ +EA ALE
Sbjct: 346 LPFSADENAVQELFSKHGSILGIRLPTDPDSGRPKGFGYVQFSSVDEARAALE 398
>gi|443919574|gb|ELU39701.1| RNA recognition motif domain-containing protein [Rhizoctonia solani
AG-1 IA]
Length = 716
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 22/46 (47%), Positives = 31/46 (67%)
Query: 27 DYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
D + + F ++G VT+V LP + +GK KGF +VEF +E ATKA E
Sbjct: 223 DGLWTAFGEFGDVTHVRLPTDQESGKPKGFGYVEFGDQEGATKAYE 268
Score = 38.9 bits (89), Expect = 0.43, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 32/54 (59%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+L ++D++ F G V + +++GK +GFA+VEFS+ EA KA+E
Sbjct: 116 RLSWNVDNDWLAQEFQGCGTVVAARVQMDRNSGKSRGFAYVEFSSPAEAQKAVE 169
>gi|443319940|ref|ZP_21049081.1| RRM domain-containing RNA-binding protein [Gloeocapsa sp. PCC
73106]
gi|442790348|gb|ELR99940.1| RRM domain-containing RNA-binding protein [Gloeocapsa sp. PCC
73106]
Length = 98
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 28/47 (59%)
Query: 26 HDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+ ++ VF YGKV V LP TGKL+GF FVE T E+ A+E
Sbjct: 14 QEELKEVFEDYGKVKRVYLPTDPETGKLRGFGFVEMETDEQEDAAIE 60
>gi|378732360|gb|EHY58819.1| nucleolin, variant [Exophiala dermatitidis NIH/UT8656]
gi|378732361|gb|EHY58820.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 1283
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 9 KKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKF-KSTGKLKGFAFVEFSTKEEA 67
K GR V +LP +A + IE FS+YGK+ ++ LP K+ + +G AF+ F+ +EEA
Sbjct: 1001 KNDGRTVFVGQLPFKATTEDIEKSFSRYGKLDHIRLPHDPKNKSRNRGIAFITFARQEEA 1060
Query: 68 TKALEL 73
AL +
Sbjct: 1061 EAALAM 1066
>gi|113478076|ref|YP_724137.1| RNA-binding region RNP-1 [Trichodesmium erythraeum IMS101]
gi|110169124|gb|ABG53664.1| RNA-binding region RNP-1 [Trichodesmium erythraeum IMS101]
Length = 97
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 31/47 (65%)
Query: 26 HDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+ + VF++YG V V LP + TG+ +GF FVE S++EE KA++
Sbjct: 14 QEDLSEVFAEYGTVKRVQLPTDRETGRPRGFGFVEMSSEEEEQKAID 60
>gi|354568213|ref|ZP_08987379.1| RNP-1 like RNA-binding protein [Fischerella sp. JSC-11]
gi|353541178|gb|EHC10648.1| RNP-1 like RNA-binding protein [Fischerella sp. JSC-11]
Length = 103
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 34/46 (73%), Gaps = 2/46 (4%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFS--TKEEA 67
A + +++VF++YG+V V LP + TG+L+GFAFVE + T+EEA
Sbjct: 23 ATEEDLKAVFAEYGQVKRVVLPTDRDTGRLRGFAFVEMNEDTQEEA 68
>gi|17533393|ref|NP_495778.1| Protein EIF-3.G, isoform b [Caenorhabditis elegans]
gi|3024026|sp|Q19706.1|EIF3G_CAEEL RecName: Full=Eukaryotic translation initiation factor 3 subunit G;
Short=eIF3g; AltName: Full=Eukaryotic translation
initiation factor 3 RNA-binding subunit; Short=eIF-3
RNA-binding subunit; AltName: Full=Eukaryotic
translation initiation factor 3 subunit 4
gi|3876226|emb|CAA90354.1| Protein EIF-3.G, isoform b [Caenorhabditis elegans]
Length = 256
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 36/67 (53%)
Query: 5 VENNKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTK 64
++ N+ LP E D + +F K G+V + + + K TG KGFAFV F ++
Sbjct: 168 IDRNRSDENTCRVTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESR 227
Query: 65 EEATKAL 71
++A +A+
Sbjct: 228 DDAARAI 234
>gi|71003261|ref|XP_756311.1| hypothetical protein UM00164.1 [Ustilago maydis 521]
gi|46096316|gb|EAK81549.1| hypothetical protein UM00164.1 [Ustilago maydis 521]
Length = 640
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 30/44 (68%)
Query: 29 IESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+++VF +G++ YV L + TGK KGF F++F E+A KALE
Sbjct: 418 VKTVFEPFGEIEYVDLHREPETGKSKGFCFIQFKKAEDAKKALE 461
>gi|366987527|ref|XP_003673530.1| hypothetical protein NCAS_0A05890 [Naumovozyma castellii CBS 4309]
gi|342299393|emb|CCC67147.1| hypothetical protein NCAS_0A05890 [Naumovozyma castellii CBS 4309]
Length = 415
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 32/49 (65%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
A+ D I +FSKYG++ V +P T + KGF +V+++ E+A KALE
Sbjct: 273 ADRDAISELFSKYGEIISVRIPTHPETEQPKGFGYVQYTNVEDAKKALE 321
>gi|221483682|gb|EEE21994.1| RNA recognition motif-containing protein, putative [Toxoplasma
gondii GT1]
Length = 997
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 15 VLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
VL L +A + +FS YG VT V +P+ + G+ +GF FV+F+TK+EA A+E
Sbjct: 913 VLVRNLAFQASASDLRGLFSAYGNVTRVCIPR-QHEGRSRGFGFVDFATKQEAQNAVE 969
>gi|428203044|ref|YP_007081633.1| RRM domain-containing RNA-binding protein [Pleurocapsa sp. PCC
7327]
gi|427980476|gb|AFY78076.1| RRM domain-containing RNA-binding protein [Pleurocapsa sp. PCC
7327]
Length = 103
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 29 IESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+ SVF++YG V V LP + TG+++GFAFVE T + A+E
Sbjct: 17 LNSVFAEYGSVKRVHLPTDRETGRMRGFAFVEMETTAQEAAAIE 60
>gi|83774819|dbj|BAE64942.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 1037
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
GR + + +A ++ +FSKYG V V LP+ K G KGF +V FS KEEAT AL
Sbjct: 743 GREIHVSNVDFKASERDVQELFSKYGTVELVRLPR-KVDGGSKGFGYVVFSNKEEATAAL 801
Query: 72 EL 73
+
Sbjct: 802 AM 803
Score = 42.0 bits (97), Expect = 0.042, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALEL 73
PPEA+ +YI +F +YG++ V P K + F +V+F T E A A +L
Sbjct: 660 FPPEADENYIRGLFREYGEIIDVRFPSLKYNTHRR-FCYVQFKTAEAAHSATKL 712
>gi|70927875|ref|XP_736232.1| RNA binding protein [Plasmodium chabaudi chabaudi]
gi|56510592|emb|CAH81069.1| RNA binding protein, putative [Plasmodium chabaudi chabaudi]
Length = 84
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 38/61 (62%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
G +++ + EA DYI+ VF ++G++ + L + TG +KG+AF+EF +A +A+
Sbjct: 22 GWIIIITNIHGEAREDYIKEVFEEFGQIRNLHLNLDRRTGFIKGYAFLEFENFVDAKRAI 81
Query: 72 E 72
+
Sbjct: 82 D 82
>gi|270001539|gb|EEZ97986.1| hypothetical protein TcasGA2_TC000381 [Tribolium castaneum]
Length = 591
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 3 ELVENNKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFS 62
E+ E K+Y R+ + + P+ D I+SVF +G + Y L + S K KG+ F+E+
Sbjct: 230 EIQEEAKQYNRIYVAS-IHPDLTEDDIKSVFEAFGPIIYCKLAQGSSGHKHKGYGFIEYE 288
Query: 63 TKEEATKAL 71
T + A +A+
Sbjct: 289 TAQAANEAI 297
Score = 34.7 bits (78), Expect = 7.3, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 26/50 (52%)
Query: 23 EAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
E + D I F +G + +++ T K KGFAFVE+ E A ALE
Sbjct: 151 ELKEDTIRQSFLPFGPIKSINMSWDPVTQKHKGFAFVEYEIPEAAQLALE 200
>gi|145346140|ref|XP_001417551.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577778|gb|ABO95844.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 92
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 15 VLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
VL + +A D I F YG V V +PK + TG+ +G AFV+++ + EA A+E
Sbjct: 3 VLVRNISFDAHEDDIRDKFQAYGNVLDVYMPKDRETGRKRGLAFVKYAIQGEADDAVE 60
>gi|302658783|ref|XP_003021091.1| hypothetical protein TRV_04804 [Trichophyton verrucosum HKI 0517]
gi|291184970|gb|EFE40473.1| hypothetical protein TRV_04804 [Trichophyton verrucosum HKI 0517]
Length = 479
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 33/49 (67%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
A+ + ++ +FSKYG + + LP +G+ KGF +V+FS+ +EA ALE
Sbjct: 355 ADENMVQELFSKYGAIQGIRLPTDPESGRPKGFGYVQFSSVDEARAALE 403
>gi|116073022|ref|ZP_01470284.1| RNA-binding protein RbpD [Synechococcus sp. RS9916]
gi|116068327|gb|EAU74079.1| RNA-binding protein RbpD [Synechococcus sp. RS9916]
Length = 107
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 34/53 (64%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
L +AE + + +FS+YG+V SLP + TG+ +GF FVE S+ + KA++
Sbjct: 8 LSFQAEQEDLLDLFSQYGEVKSASLPLDRETGRKRGFGFVEMSSDADEQKAID 60
>gi|116182074|ref|XP_001220886.1| hypothetical protein CHGG_01665 [Chaetomium globosum CBS 148.51]
gi|88185962|gb|EAQ93430.1| hypothetical protein CHGG_01665 [Chaetomium globosum CBS 148.51]
Length = 2009
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 27/59 (45%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
++V+K LP EA + ++FS YGK+ + LPK K +GFAF EFST +EA AL
Sbjct: 714 KIVIK-NLPFEASKKDVRALFSAYGKLVALRLPK-KFNHTSRGFAFAEFSTAKEALNAL 770
>gi|2981305|gb|AAC38968.1| sex-lethal homolog CcSXL [Ceratitis capitata]
Length = 340
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLNPC 78
LP D ++++F KYG + ++ + K TGK +G AFV F+ +EEA +A+ N
Sbjct: 194 NLPRTITDDQLDTIFGKYGMIVQKNILRDKLTGKPRGVAFVRFNKREEAQEAISALNNVI 253
Query: 79 P 79
P
Sbjct: 254 P 254
>gi|414075426|ref|YP_006994744.1| RNA-binding protein [Anabaena sp. 90]
gi|413968842|gb|AFW92931.1| RNA-binding protein [Anabaena sp. 90]
Length = 108
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
L E + + +VF+ YG V V LP + TG+L+GF FVE T+ E A++
Sbjct: 8 LSYEVTQEALSAVFADYGAVKRVQLPTDRETGRLRGFGFVEMGTEAEEQAAID 60
>gi|356524836|ref|XP_003531034.1| PREDICTED: uncharacterized protein LOC100778928 [Glycine max]
Length = 267
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 29/41 (70%)
Query: 32 VFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+F KYGKV + +PK + TG+ +GFAFV + +EA KA+E
Sbjct: 35 LFDKYGKVVDIFIPKDRRTGESRGFAFVRYKYADEAQKAVE 75
>gi|300122958|emb|CBK23965.2| unnamed protein product [Blastocystis hominis]
Length = 173
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%)
Query: 15 VLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
V + LP +A + + + F KYGK+ + +P+ G +GF FV + ++EA KAL+
Sbjct: 16 VRIDNLPNDATKEDLNNHFEKYGKIADIYIPRNTHDGGNRGFGFVRYVNEDEARKALD 73
>gi|237841019|ref|XP_002369807.1| RNA recognition motif-containing protein [Toxoplasma gondii ME49]
gi|211967471|gb|EEB02667.1| RNA recognition motif-containing protein [Toxoplasma gondii ME49]
Length = 997
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 15 VLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
VL L +A + +FS YG VT V +P+ + G+ +GF FV+F+TK+EA A+E
Sbjct: 913 VLVRNLAFQASASDLRGLFSAYGNVTRVCIPR-QHEGRSRGFGFVDFATKQEAQNAVE 969
>gi|254410375|ref|ZP_05024154.1| RNA-binding protein [Coleofasciculus chthonoplastes PCC 7420]
gi|196182581|gb|EDX77566.1| RNA-binding protein [Coleofasciculus chthonoplastes PCC 7420]
Length = 103
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 34/53 (64%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
L +A + I S+F++YG V V LP + TG+++GF FVE ++ E + A++
Sbjct: 8 LSYDATEEDITSIFAEYGTVKRVQLPTDRETGRMRGFGFVEMDSEAEESAAID 60
>gi|66819971|ref|XP_643642.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|60471524|gb|EAL69480.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 299
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 32/45 (71%)
Query: 29 IESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALEL 73
++ FSK G ++ VSLP ++ +G+LKGFAFV F +++ KA+ L
Sbjct: 177 VKEFFSKCGSISRVSLPVYEDSGRLKGFAFVSFDSEDAVEKAIAL 221
>gi|154338582|ref|XP_001565513.1| putative poly(A)-binding protein 3 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134062565|emb|CAM39007.1| putative poly(A)-binding protein 3 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 552
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 9 KKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAT 68
+ +GR + + LP + D + +F+ +GK+T ++ + +S G L+GFAFV F K+ AT
Sbjct: 285 QNHGRNLYVKHLPDDITDDKLREIFAPFGKITSCAIMR-ESNGSLRGFAFVCFEDKQHAT 343
Query: 69 KAL 71
A+
Sbjct: 344 AAM 346
>gi|254423595|ref|ZP_05037313.1| RNA-binding protein, putative [Synechococcus sp. PCC 7335]
gi|196191084|gb|EDX86048.1| RNA-binding protein, putative [Synechococcus sp. PCC 7335]
Length = 84
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 30/44 (68%)
Query: 29 IESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+ VF++YG V V+LP + TG+++GFAFV+ S+ E A+E
Sbjct: 17 LNGVFAEYGTVKRVTLPTDRETGRVRGFAFVDLSSDSEEDAAIE 60
>gi|428163795|gb|EKX32848.1| hypothetical protein GUITHDRAFT_120952 [Guillardia theta CCMP2712]
Length = 310
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 35/53 (66%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
LP + D ++ SK G+VT +S+ +F ++ + KGFA E++T+E+A A+E
Sbjct: 75 LPISVQDDALKEFLSKVGEVTSLSVKRFPNSDRCKGFAMAEYATEEQAKAAIE 127
>gi|168034644|ref|XP_001769822.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678931|gb|EDQ65384.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 505
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 29/41 (70%)
Query: 33 FSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALEL 73
F + G V V +P + TG++KGFA+VEF +K+E TKA EL
Sbjct: 370 FGECGNVVNVRIPTDRETGQIKGFAYVEFGSKDEMTKAFEL 410
>gi|126660168|ref|ZP_01731286.1| RNA binding protein [Cyanothece sp. CCY0110]
gi|126618533|gb|EAZ89284.1| RNA binding protein [Cyanothece sp. CCY0110]
Length = 98
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 28/41 (68%)
Query: 32 VFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
VFS+YG V VSLP + TG+ +GF FVE + +E T A+E
Sbjct: 20 VFSEYGTVKRVSLPTDRETGRPRGFGFVEMESDDEETAAIE 60
>gi|224133750|ref|XP_002327671.1| predicted protein [Populus trichocarpa]
gi|222836756|gb|EEE75149.1| predicted protein [Populus trichocarpa]
Length = 284
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+ + + LPP + D + YG++ V L + ST K K F FV+FST ++A +E
Sbjct: 199 KTIFLDGLPPHWDEDRVRECLKGYGEIVRVVLARNMSTAKRKDFGFVDFSTHDDAVACIE 258
Query: 73 LGLN 76
G+N
Sbjct: 259 -GIN 261
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 34/58 (58%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLNP 77
L +A + + VF K G+V V L K ST + KG+AFV+F++KE +AL NP
Sbjct: 28 LDRDATEEDLRKVFEKIGEVVEVRLHKNLSTNRNKGYAFVKFASKEHVKRALSEMKNP 85
>gi|52075416|emb|CAG29242.1| sex-lethal protein [Bactrocera oleae]
Length = 339
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLNPC 78
LP D ++++F KYG + ++ + K TGK +G AFV F+ +EEA +A+ N
Sbjct: 197 NLPRTITDDQLDTIFGKYGMIVQKNILRDKLTGKPRGVAFVRFNKREEAQEAISALNNVI 256
Query: 79 P 79
P
Sbjct: 257 P 257
>gi|67923265|ref|ZP_00516750.1| RNA-binding region RNP-1 (RNA recognition motif) [Crocosphaera
watsonii WH 8501]
gi|67854891|gb|EAM50165.1| RNA-binding region RNP-1 (RNA recognition motif) [Crocosphaera
watsonii WH 8501]
Length = 94
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 31/43 (72%)
Query: 29 IESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
+E VF++YG V V +PK + +G+++GFAFVE + ++ +A+
Sbjct: 17 LEEVFTEYGSVKRVHIPKDRESGRMRGFAFVEMDSDDQEQEAI 59
>gi|167526983|ref|XP_001747824.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773573|gb|EDQ87211.1| predicted protein [Monosiga brevicollis MX1]
Length = 159
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 37/63 (58%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
G +V+ + EA + + FS+YG V + L + TG +KG+A +E+ +KEEA A+
Sbjct: 71 GWIVIARNIHEEAAEEDVLDKFSEYGDVRNLHLNLDRRTGYVKGYALIEYDSKEEALAAV 130
Query: 72 ELG 74
E G
Sbjct: 131 EKG 133
>gi|374299435|ref|YP_005051074.1| RNP-1 like RNA-binding protein [Desulfovibrio africanus str.
Walvis Bay]
gi|332552371|gb|EGJ49415.1| RNP-1 like RNA-binding protein [Desulfovibrio africanus str.
Walvis Bay]
Length = 100
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTK--EEATKALE 72
LP A D I +FS YG+V VSL + TG+L+GF FVE + EA ++L+
Sbjct: 10 LPFSASEDDIRDLFSTYGEVNSVSLITDRETGRLRGFGFVEMDDEGAREAIQSLD 64
>gi|448878409|gb|AGE46167.1| arginine/serine-rich splicing factor SC39 transcript I
[Physcomitrella patens subsp. patens]
Length = 340
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%)
Query: 27 DYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
D + +F +YGKV + +P+ + TG+ +GFAFV + +EA KA+E
Sbjct: 30 DDLYPLFDRYGKVVDIFIPRDRRTGESRGFAFVRYKYSDEAQKAIE 75
>gi|345568773|gb|EGX51665.1| hypothetical protein AOL_s00054g64 [Arthrobotrys oligospora ATCC
24927]
Length = 284
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
AE + +F ++G+VT V L K + TG+ KGFAFV + + +A +A E
Sbjct: 215 AEEQDLRDMFERFGRVTRVFLAKDRDTGRAKGFAFVSYQDRLDAQRACE 263
>gi|359476835|ref|XP_002266579.2| PREDICTED: uncharacterized protein LOC100259067 [Vitis vinifera]
gi|297735034|emb|CBI17396.3| unnamed protein product [Vitis vinifera]
Length = 827
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 36/56 (64%)
Query: 23 EAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLNPC 78
+AE + ++ VF + G+V V L K S+ K KG+AFV+F+ KE A++AL NP
Sbjct: 336 DAEEEDVKKVFERIGEVVEVRLHKNLSSNKNKGYAFVKFANKEHASRALSEMKNPV 391
Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 32/60 (53%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+ V + LPP + D + F YG++ + L + ST K K F FV+F+T E A ++
Sbjct: 504 KSVFVDGLPPHWDEDRVREQFKGYGEIERIVLARNMSTAKRKDFGFVDFTTHEAALSCID 563
>gi|255642028|gb|ACU21281.1| unknown [Glycine max]
Length = 254
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 29/41 (70%)
Query: 32 VFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+F KYGKV + +PK + TG+ +GFAFV + +EA KA+E
Sbjct: 35 LFDKYGKVVDIFIPKDRRTGESRGFAFVRYKYADEAQKAVE 75
>gi|255732796|ref|XP_002551321.1| hypothetical protein CTRG_05619 [Candida tropicalis MYA-3404]
gi|240131062|gb|EER30623.1| hypothetical protein CTRG_05619 [Candida tropicalis MYA-3404]
Length = 409
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
R++ L + D +E F G +T + + F+ TGK KGFAF++F +E AT AL
Sbjct: 216 RILFVGNLSFDTTEDNLEEHFRHCGDITRIRMATFQDTGKCKGFAFIDFKNEEGATNALN 275
Query: 73 LGL 75
L
Sbjct: 276 SKL 278
>gi|67536962|ref|XP_662255.1| hypothetical protein AN4651.2 [Aspergillus nidulans FGSC A4]
gi|40741263|gb|EAA60453.1| hypothetical protein AN4651.2 [Aspergillus nidulans FGSC A4]
Length = 1639
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
GR + + A D ++ +FS++G V V LP+ K G KGF +V FS+KEEAT AL
Sbjct: 994 GREIHVSNVNWSASEDDLKELFSRFGTVELVRLPR-KVDGGSKGFGYVVFSSKEEATAAL 1052
Query: 72 EL 73
+
Sbjct: 1053 AM 1054
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALEL 73
PP A+ +YI +FSKYG++ + P K + F +++F T A AL L
Sbjct: 911 FPPTADENYIRDLFSKYGEIIDIRFPSLKYNTHRR-FCYLQFKTSVAAHSALAL 963
>gi|427738497|ref|YP_007058041.1| RRM domain-containing RNA-binding protein [Rivularia sp. PCC
7116]
gi|427373538|gb|AFY57494.1| RRM domain-containing RNA-binding protein [Rivularia sp. PCC
7116]
Length = 95
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
L E + + VF++YG V V +P + TG+++GFAFVE ++ + KA+E
Sbjct: 8 LSYEVSQEGLNEVFAEYGTVKRVQIPTDRETGRVRGFAFVEMESEADEEKAIE 60
>gi|13357168|gb|AAK20025.1|AF234183_1 sex-lethal protein SXL1 [Lucilia cuprina]
Length = 324
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 34/61 (55%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLNPC 78
LP D +E +F KYG + ++ + K TGK +G AFV F+ +EEA +A+ N
Sbjct: 194 NLPRTITDDELEKIFGKYGNIVQKNILRDKLTGKPRGVAFVRFNKREEAQEAISALNNVI 253
Query: 79 P 79
P
Sbjct: 254 P 254
>gi|356512057|ref|XP_003524737.1| PREDICTED: uncharacterized protein LOC100804370 [Glycine max]
Length = 267
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 29/41 (70%)
Query: 32 VFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+F KYGKV + +PK + TG+ +GFAFV + +EA KA+E
Sbjct: 35 LFDKYGKVVDIFIPKDRRTGESRGFAFVRYKYADEAQKAVE 75
>gi|75908205|ref|YP_322501.1| RNA-binding region RNP-1 [Anabaena variabilis ATCC 29413]
gi|75701930|gb|ABA21606.1| RNA-binding region RNP-1 [Anabaena variabilis ATCC 29413]
Length = 109
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 29/41 (70%)
Query: 32 VFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
F++YGKV+ V LP + TG+ +GFAFVE T+ + T A+E
Sbjct: 20 AFAEYGKVSRVQLPTDRETGRPRGFAFVEMETEAQETAAIE 60
>gi|171681916|ref|XP_001905901.1| hypothetical protein [Podospora anserina S mat+]
gi|170940917|emb|CAP66567.1| unnamed protein product [Podospora anserina S mat+]
Length = 804
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 15 VLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
V + +P E + +F+KYG VT SL + GK +GF FV F+T E A+KA+E
Sbjct: 297 VYVKNIPAEVTDEEFRELFAKYGDVTSSSLAR-SDEGKSRGFGFVNFTTHEAASKAVE 353
>gi|391865004|gb|EIT74296.1| RNA-binding protein [Aspergillus oryzae 3.042]
Length = 1290
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
GR + + +A ++ +FSKYG V V LP+ K G KGF +V FS KEEAT AL
Sbjct: 996 GREIHVSNVDFKASERDVQELFSKYGTVELVRLPR-KVDGGSKGFGYVVFSNKEEATAAL 1054
Query: 72 EL 73
+
Sbjct: 1055 AM 1056
Score = 42.0 bits (97), Expect = 0.048, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALEL 73
PPEA+ +YI +F +YG++ V P K + F +V+F T E A A +L
Sbjct: 913 FPPEADENYIRGLFREYGEIIDVRFPSLKYNTHRR-FCYVQFKTAEAAHSATKL 965
>gi|238492991|ref|XP_002377732.1| pre-mRNA splicing factor (Prp24), putative [Aspergillus flavus
NRRL3357]
gi|220696226|gb|EED52568.1| pre-mRNA splicing factor (Prp24), putative [Aspergillus flavus
NRRL3357]
Length = 1290
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
GR + + +A ++ +FSKYG V V LP+ K G KGF +V FS KEEAT AL
Sbjct: 996 GREIHVSNVDFKASERDVQELFSKYGTVELVRLPR-KVDGGSKGFGYVVFSNKEEATAAL 1054
Query: 72 EL 73
+
Sbjct: 1055 AM 1056
Score = 42.0 bits (97), Expect = 0.047, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALEL 73
PPEA+ +YI +F +YG++ V P K + F +V+F T E A A +L
Sbjct: 913 FPPEADENYIRGLFREYGEIIDVRFPSLKYNTHRR-FCYVQFKTAEAAHSATKL 965
>gi|116070776|ref|ZP_01468045.1| RNA-binding region RNP-1 [Synechococcus sp. BL107]
gi|116066181|gb|EAU71938.1| RNA-binding region RNP-1 [Synechococcus sp. BL107]
Length = 81
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 35/53 (66%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
L +AE + + +FS+YG+V+ S+P + TG+ +GFAFV+ +E KA++
Sbjct: 8 LSWDAEREDLIHLFSQYGEVSKCSMPLDRETGRKRGFAFVDLGNADEEKKAID 60
>gi|449282696|gb|EMC89507.1| RNA-binding protein 28, partial [Columba livia]
Length = 522
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 35/54 (64%), Gaps = 2/54 (3%)
Query: 23 EAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLN 76
+ D + S+FS +G + V++PK K GK++GFAFV+F EA KAL G+N
Sbjct: 1 QCSEDDLRSLFSPFGTILEVNIPK-KPDGKMRGFAFVQFQKVLEAAKALR-GMN 52
>gi|317156878|ref|XP_001826075.2| pre-mRNA splicing factor (Prp24) [Aspergillus oryzae RIB40]
Length = 1289
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
GR + + +A ++ +FSKYG V V LP+ K G KGF +V FS KEEAT AL
Sbjct: 995 GREIHVSNVDFKASERDVQELFSKYGTVELVRLPR-KVDGGSKGFGYVVFSNKEEATAAL 1053
Query: 72 EL 73
+
Sbjct: 1054 AM 1055
Score = 42.0 bits (97), Expect = 0.047, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALEL 73
PPEA+ +YI +F +YG++ V P K + F +V+F T E A A +L
Sbjct: 912 FPPEADENYIRGLFREYGEIIDVRFPSLKYNTHRR-FCYVQFKTAEAAHSATKL 964
>gi|259482511|tpe|CBF77063.1| TPA: pre-mRNA splicing factor (Prp24), putative (AFU_orthologue;
AFUA_2G01820) [Aspergillus nidulans FGSC A4]
Length = 1290
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
GR + + A D ++ +FS++G V V LP+ K G KGF +V FS+KEEAT AL
Sbjct: 995 GREIHVSNVNWSASEDDLKELFSRFGTVELVRLPR-KVDGGSKGFGYVVFSSKEEATAAL 1053
Query: 72 EL 73
+
Sbjct: 1054 AM 1055
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALEL 73
PP A+ +YI +FSKYG++ + P K + F +++F T A AL L
Sbjct: 912 FPPTADENYIRDLFSKYGEIIDIRFPSLKYNTHRR-FCYLQFKTSVAAHSALAL 964
>gi|428218969|ref|YP_007103434.1| RNP-1 like RNA-binding protein [Pseudanabaena sp. PCC 7367]
gi|427990751|gb|AFY71006.1| RNP-1 like RNA-binding protein [Pseudanabaena sp. PCC 7367]
Length = 88
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 31/54 (57%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
L +A +E +F+ YG V V L + TG+++GF FV+ S ++E A+E
Sbjct: 7 NLSYQATQQDVEEIFNDYGSVKRVQLITDRETGRMRGFGFVDMSDEDEEDNAIE 60
>gi|425466928|ref|ZP_18846222.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC
9809]
gi|389830427|emb|CCI27639.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC
9809]
Length = 97
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 32/53 (60%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
L E + + VF +YGKV V +P K TG+ +GFAFVE +K + T A+E
Sbjct: 8 LSYEISQEDLVDVFKEYGKVQRVHIPVDKETGRKRGFAFVEMESKAQETTAIE 60
>gi|221484195|gb|EEE22491.1| nucleolar phosphoprotein, putative [Toxoplasma gondii GT1]
Length = 705
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 23/49 (46%), Positives = 33/49 (67%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
A + I S+F + G++ V +P F+ TGK KG AF+EF + E ATKA+E
Sbjct: 569 ATEESIRSLFEECGEIQEVRMPVFEDTGKFKGQAFIEFDSIESATKAVE 617
>gi|254431254|ref|ZP_05044957.1| RNA-binding region RNP-1 [Cyanobium sp. PCC 7001]
gi|197625707|gb|EDY38266.1| RNA-binding region RNP-1 [Cyanobium sp. PCC 7001]
Length = 169
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 34/54 (62%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
LP AE + + +F+ +G+V +LP + TG+ +GFAFVE + E ++A+E
Sbjct: 7 NLPFRAEQEDVAELFAPFGEVVSCALPLERDTGRKRGFAFVEMADPEAESRAIE 60
>gi|67923998|ref|ZP_00517451.1| RNA-binding region RNP-1 (RNA recognition motif) [Crocosphaera
watsonii WH 8501]
gi|416401054|ref|ZP_11687154.1| RNA-binding protein [Crocosphaera watsonii WH 0003]
gi|67854173|gb|EAM49479.1| RNA-binding region RNP-1 (RNA recognition motif) [Crocosphaera
watsonii WH 8501]
gi|357262154|gb|EHJ11338.1| RNA-binding protein [Crocosphaera watsonii WH 0003]
Length = 81
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 33/53 (62%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
L E + + + VF++YG V V +P K TG+ +GFAFVE TK E + A+E
Sbjct: 8 LSYEVKEEDLNEVFAEYGTVKRVHVPTDKETGRPRGFAFVELETKAEESSAIE 60
>gi|260434962|ref|ZP_05788932.1| RNA-binding region RNP-1 [Synechococcus sp. WH 8109]
gi|260412836|gb|EEX06132.1| RNA-binding region RNP-1 [Synechococcus sp. WH 8109]
Length = 95
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 34/54 (62%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
L +AE +++ +FS+YG+V SLP + TG+ +GFAFVE + KA++
Sbjct: 7 NLSFQAEQEHLFDLFSEYGEVKNCSLPLDRETGRKRGFAFVEMVNDADEQKAID 60
>gi|237838475|ref|XP_002368535.1| nucleolar phosphoprotein nucleolin, putative [Toxoplasma gondii
ME49]
gi|211966199|gb|EEB01395.1| nucleolar phosphoprotein nucleolin, putative [Toxoplasma gondii
ME49]
gi|221505826|gb|EEE31471.1| nucleolar phosphoprotein, putative [Toxoplasma gondii VEG]
Length = 705
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 23/49 (46%), Positives = 33/49 (67%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
A + I S+F + G++ V +P F+ TGK KG AF+EF + E ATKA+E
Sbjct: 569 ATEESIRSLFEECGEIQEVRMPVFEDTGKFKGQAFIEFDSIESATKAVE 617
>gi|427703571|ref|YP_007046793.1| RRM domain-containing RNA-binding protein [Cyanobium gracile PCC
6307]
gi|427346739|gb|AFY29452.1| RRM domain-containing RNA-binding protein [Cyanobium gracile PCC
6307]
Length = 178
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 34/54 (62%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
LP AE + + +F+ +G+V SLP + TG+ +GFAF+E + + T+A++
Sbjct: 7 NLPFRAEQEDVAELFAPFGEVVNCSLPLERDTGRKRGFAFIEMADADTETRAID 60
>gi|296411493|ref|XP_002835465.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629249|emb|CAZ79622.1| unnamed protein product [Tuber melanosporum]
Length = 289
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
AE + +F ++G+VT V L K + TG+ KGFAF+ + + +A KA E
Sbjct: 221 AEESDLREMFERFGRVTRVFLAKDRDTGRAKGFAFISYVDRSDAAKACE 269
>gi|225459316|ref|XP_002285794.1| PREDICTED: uncharacterized protein LOC100243776 [Vitis vinifera]
gi|302141951|emb|CBI19154.3| unnamed protein product [Vitis vinifera]
Length = 257
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 28/41 (68%)
Query: 32 VFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+F KYGKV V +P+ + TG +GFAFV + +EA KA+E
Sbjct: 35 LFDKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVE 75
>gi|119488026|ref|ZP_01621470.1| RNA-binding region protein [Lyngbya sp. PCC 8106]
gi|119455315|gb|EAW36454.1| RNA-binding region protein [Lyngbya sp. PCC 8106]
Length = 100
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
L E + ++SVF++YG V VS+P + TG+ +GFAFVE + E A+E
Sbjct: 8 LAYEVTEEDLKSVFAEYGAVQRVSIPTDRETGRPRGFAFVEMGAESEEDAAIE 60
>gi|354556704|ref|ZP_08975994.1| RNP-1 like RNA-binding protein [Cyanothece sp. ATCC 51472]
gi|353551316|gb|EHC20722.1| RNP-1 like RNA-binding protein [Cyanothece sp. ATCC 51472]
Length = 94
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 28/44 (63%)
Query: 29 IESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+E VF +YG V V +P + TGK +GF FVE T+ E T A+E
Sbjct: 17 LEEVFGEYGTVKRVQIPSDRETGKSRGFGFVEMGTETEETAAIE 60
>gi|6226775|sp|O97018.2|SXL_CHRRU RecName: Full=Sex-lethal homolog
gi|25291016|gb|AAN74807.1| sex-lethal [Chrysomya rufifacies]
Length = 307
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 34/61 (55%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLNPC 78
LP D +E +F KYG + ++ + K TGK +G AFV F+ +EEA +A+ N
Sbjct: 177 NLPRTITDDELEKIFGKYGNIVQKNILRDKLTGKPRGVAFVRFNKREEAQEAISALNNVI 236
Query: 79 P 79
P
Sbjct: 237 P 237
>gi|425442381|ref|ZP_18822630.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC
9717]
gi|389716645|emb|CCH99152.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC
9717]
Length = 98
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
LP E + + + VF +YG++ V LP + T + +GFAFVE T E+ KA+
Sbjct: 8 LPFEVDQEDVVEVFKEYGEIKRVHLPMDRETKRKRGFAFVEMETPEQEAKAI 59
>gi|313681522|ref|YP_004059260.1| rnp-1 like RNA-binding protein [Sulfuricurvum kujiense DSM 16994]
gi|313154382|gb|ADR33060.1| RNP-1 like RNA-binding protein [Sulfuricurvum kujiense DSM 16994]
Length = 90
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 33/53 (62%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
+P + + ++ +F +YG+V+ V K TG+ +GF FVE + K+EA KA+
Sbjct: 8 NIPYGKDENDLKDLFGQYGEVSSVKFVNDKETGRFRGFGFVEMANKDEADKAI 60
>gi|218439795|ref|YP_002378124.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7424]
gi|218172523|gb|ACK71256.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7424]
Length = 97
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 26/40 (65%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFV 59
LP E E ++ VF+ YGKV V LP + TGK +GFAFV
Sbjct: 8 LPHEVEDKHLTEVFADYGKVNRVYLPTDRETGKRRGFAFV 47
>gi|13357170|gb|AAK20026.1|AF234184_1 sex-lethal protein SXL2 [Lucilia cuprina]
Length = 325
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 34/61 (55%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLNPC 78
LP D +E +F KYG + ++ + K TGK +G AFV F+ +EEA +A+ N
Sbjct: 194 NLPRTITDDELEKIFGKYGNIVQKNILRDKLTGKPRGVAFVRFNKREEAQEAISALNNVI 253
Query: 79 P 79
P
Sbjct: 254 P 254
>gi|345565557|gb|EGX48506.1| hypothetical protein AOL_s00080g135 [Arthrobotrys oligospora ATCC
24927]
Length = 147
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 39/61 (63%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
G +VL + EA + + +F+++G+V + L + TG +KG+A VE+STKEEA A+
Sbjct: 29 GWIVLVTNVHEEAGEEDLNDLFAEHGEVQNLHLNLDRRTGYVKGYALVEYSTKEEAQSAI 88
Query: 72 E 72
+
Sbjct: 89 D 89
>gi|171694916|ref|XP_001912382.1| hypothetical protein [Podospora anserina S mat+]
gi|170947700|emb|CAP59862.1| unnamed protein product [Podospora anserina S mat+]
Length = 197
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 39/65 (60%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
G +++ + EA+ + I +F +YG++ + L + TG +KG+A +E+ST EEA A+
Sbjct: 54 GWIIMVTNVHEEADEEAIHDMFGEYGEIRNLHLNLDRRTGYVKGYALIEYSTIEEARAAI 113
Query: 72 ELGLN 76
+ N
Sbjct: 114 DGAHN 118
>gi|427734808|ref|YP_007054352.1| RRM domain-containing RNA-binding protein [Rivularia sp. PCC
7116]
gi|427369849|gb|AFY53805.1| RRM domain-containing RNA-binding protein [Rivularia sp. PCC
7116]
Length = 98
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 31/43 (72%)
Query: 29 IESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
+ +VF+ YG+VT V LP + TG+++GFAFV+ S + + +A+
Sbjct: 17 LRAVFTDYGEVTRVVLPTDRETGRMRGFAFVDLSEESQEDEAI 59
>gi|406862321|gb|EKD15372.1| eukaryotic translation initiation factor 3, subunit 4 [Marssonina
brunnea f. sp. 'multigermtubi' MB_m1]
Length = 294
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
AE + +F ++G+VT V L K + TG KGFAF+ F + +A KA E
Sbjct: 225 AEEQELRDMFERFGRVTRVFLAKDRETGMAKGFAFISFQERTDAAKACE 273
>gi|357635456|ref|ZP_09133334.1| RNP-1 like RNA-binding protein [Desulfovibrio sp. FW1012B]
gi|386393392|ref|ZP_10078173.1| RRM domain-containing RNA-binding protein [Desulfovibrio sp. U5L]
gi|357584010|gb|EHJ49343.1| RNP-1 like RNA-binding protein [Desulfovibrio sp. FW1012B]
gi|385734270|gb|EIG54468.1| RRM domain-containing RNA-binding protein [Desulfovibrio sp. U5L]
Length = 98
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
LP D I +FS YG+V V+L + TG+L+GF FVE +T E A A+E
Sbjct: 9 NLPFSTNEDEIRDMFSAYGEVQSVNLIVDRETGRLRGFGFVEMTT-EGADAAME 61
>gi|6226777|sp|O17310.1|SXL_MUSDO RecName: Full=Sex-lethal homolog
gi|2565364|gb|AAB81986.1| Sex-lethal protein [Musca domestica]
Length = 324
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 34/61 (55%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLNPC 78
LP D +E +F KYG + ++ + K TG+ +G AFV F+ +EEA +A+ N
Sbjct: 194 NLPRTITDDELEKIFGKYGNIVQKNILRDKLTGRPRGVAFVRFNKREEAQEAISALNNVI 253
Query: 79 P 79
P
Sbjct: 254 P 254
>gi|405118924|gb|AFR93697.1| RNA binding protein [Cryptococcus neoformans var. grubii H99]
Length = 150
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 37/60 (61%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+VV+ L +++ +FS+YG++T + LP FK +G KG A +EF T A+KA++
Sbjct: 59 KVVVVSGLSKNVMKGHLDEIFSEYGRITGIDLPLFKVSGLNKGKAAIEFDTPAAASKAVK 118
>gi|401402625|ref|XP_003881295.1| putative nucleolar phosphoprotein nucleolin [Neospora caninum
Liverpool]
gi|325115707|emb|CBZ51262.1| putative nucleolar phosphoprotein nucleolin [Neospora caninum
Liverpool]
Length = 710
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 36/58 (62%)
Query: 15 VLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
V+ L A + I S+F + G++ V +P F+ TGK KG AF+EF + E ATKA+E
Sbjct: 562 VVVRNLSFNATEESIRSLFEECGEIQEVRMPVFEDTGKFKGQAFIEFDSIESATKAVE 619
>gi|171695432|ref|XP_001912640.1| hypothetical protein [Podospora anserina S mat+]
gi|170947958|emb|CAP60122.1| unnamed protein product [Podospora anserina S mat+]
Length = 901
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 27/64 (42%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 8 NKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEA 67
N + +VV+K LP EA + ++FS YGK+ + +PK K +GFAF EFST +EA
Sbjct: 684 NAQRTKVVIK-NLPFEASKKDVRALFSNYGKLVALRIPK-KFNHSSRGFAFAEFSTGKEA 741
Query: 68 TKAL 71
A+
Sbjct: 742 LNAI 745
>gi|168015818|ref|XP_001760447.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688461|gb|EDQ74838.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 259
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%)
Query: 27 DYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
D + +F +YGKV + +P+ + TG+ +GFAFV + +EA KA+E
Sbjct: 30 DDLYPLFDRYGKVVDIFIPRDRRTGESRGFAFVRYKYADEAQKAIE 75
>gi|443897539|dbj|GAC74879.1| translation initiation factor 3, subunit g [Pseudozyma antarctica
T-34]
Length = 308
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 34/53 (64%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
L +A+ D + +F ++G+V V + + + TG KG+AFV F T+E+A +A +
Sbjct: 232 LSEDADDDDLRELFGRFGRVVRVYVGRDRETGICKGYAFVSFETREDADRARQ 284
>gi|78213170|ref|YP_381949.1| RNA recognition motif-containing protein [Synechococcus sp.
CC9605]
gi|78197629|gb|ABB35394.1| RNA-binding region RNP-1 (RNA recognition motif) [Synechococcus
sp. CC9605]
Length = 95
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 34/54 (62%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
L +AE +++ +FS+YG+V SLP + TG+ +GFAFVE + KA++
Sbjct: 7 NLSFQAEQEHLFDLFSEYGEVKNCSLPLDRETGRKRGFAFVEMVNDADEQKAID 60
>gi|17232175|ref|NP_488723.1| RNA-binding protein [Nostoc sp. PCC 7120]
gi|6274493|gb|AAF06670.1|AF196328_2 RbpD [Nostoc sp. PCC 7120]
gi|1064777|dbj|BAA08402.1| RNA-binding protein [Anabaena variabilis]
gi|17133820|dbj|BAB76382.1| RNA-binding protein [Nostoc sp. PCC 7120]
Length = 110
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 29/41 (70%)
Query: 32 VFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
F++YGKV+ V LP + TG+ +GFAFVE T+ + T A+E
Sbjct: 20 AFAEYGKVSRVQLPTDRETGRPRGFAFVEMETEAQETAAIE 60
>gi|373459057|ref|ZP_09550824.1| RNP-1 like RNA-binding protein [Caldithrix abyssi DSM 13497]
gi|371720721|gb|EHO42492.1| RNP-1 like RNA-binding protein [Caldithrix abyssi DSM 13497]
Length = 97
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 33/54 (61%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+P +E I +F +YG V+ V L + + TG+L+GF FV ++EEA A++
Sbjct: 7 NIPRNSEEQPIRELFEEYGSVSEVKLLRDRYTGELRGFGFVTMESEEEAQNAID 60
>gi|449528821|ref|XP_004171401.1| PREDICTED: uncharacterized LOC101216322 [Cucumis sativus]
Length = 251
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 30/46 (65%)
Query: 27 DYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
D + +F KYGKV V +P+ + TG +GFAFV + +EA KA++
Sbjct: 30 DDLYPLFDKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAID 75
>gi|354564693|ref|ZP_08983869.1| RNP-1 like RNA-binding protein [Fischerella sp. JSC-11]
gi|353549819|gb|EHC19258.1| RNP-1 like RNA-binding protein [Fischerella sp. JSC-11]
Length = 103
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFST 63
L E E D ++ VFS+YG V V LP + TG+++GFAFVE +
Sbjct: 8 LSYEVEQDDLKQVFSEYGTVKSVQLPVDRETGRVRGFAFVEMGS 51
>gi|50552081|ref|XP_503515.1| YALI0E03828p [Yarrowia lipolytica]
gi|74689524|sp|Q6C747.1|EIF3G_YARLI RecName: Full=Eukaryotic translation initiation factor 3 subunit G;
Short=eIF3g; AltName: Full=Eukaryotic translation
initiation factor 3 RNA-binding subunit; Short=eIF-3
RNA-binding subunit; AltName: Full=Translation
initiation factor eIF3 p33 subunit homolog; Short=eIF3
p33 homolog
gi|49649384|emb|CAG79094.1| YALI0E03828p [Yarrowia lipolytica CLIB122]
Length = 294
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 31/53 (58%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
L EA D + +F KYG + V + K + TG+ +GFAFV ++ K A ALE
Sbjct: 221 LSEEATDDDLRRMFGKYGMINRVYVAKDRDTGRPRGFAFVTYTLKSHAQAALE 273
>gi|42521942|ref|NP_967322.1| RNA-binding protein [Bdellovibrio bacteriovorus HD100]
gi|39574472|emb|CAE77976.1| RNA-binding protein [Bdellovibrio bacteriovorus HD100]
Length = 104
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
G+ + L + D + +F+ +G V V++ + TG+ KGFAFVE S+ EAT A+
Sbjct: 2 GKKIYVGNLSYNVDQDQLGGLFADFGTVDSVNIITDRDTGRSKGFAFVEMSSDSEATAAI 61
Query: 72 E 72
+
Sbjct: 62 D 62
>gi|158333760|ref|YP_001514932.1| RNA-binding domain-containing protein [Acaryochloris marina
MBIC11017]
gi|359463897|ref|ZP_09252460.1| RNA-binding region [Acaryochloris sp. CCMEE 5410]
gi|158304001|gb|ABW25618.1| RNA-binding region [Acaryochloris marina MBIC11017]
Length = 95
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 25 EHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
E D + +VF++YG V LP + TG+++GF FVE S E TKA+E
Sbjct: 14 EQD-LNTVFAEYGTVKSAKLPTDRETGRVRGFGFVEMSDDAEETKAIE 60
>gi|116196004|ref|XP_001223814.1| hypothetical protein CHGG_04600 [Chaetomium globosum CBS 148.51]
gi|121937877|sp|Q2H0U6.1|EIF3G_CHAGB RecName: Full=Eukaryotic translation initiation factor 3 subunit G;
Short=eIF3g; AltName: Full=Eukaryotic translation
initiation factor 3 RNA-binding subunit; Short=eIF-3
RNA-binding subunit; AltName: Full=Translation
initiation factor eIF3 p33 subunit homolog; Short=eIF3
p33 homolog
gi|88180513|gb|EAQ87981.1| hypothetical protein CHGG_04600 [Chaetomium globosum CBS 148.51]
Length = 303
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 31/48 (64%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
AE + +F ++G+VT V L K + TG KGFAF+ ++ +++A KA
Sbjct: 234 AEEQELRDMFERFGRVTRVFLAKDRDTGMAKGFAFISYADRDDAVKAC 281
>gi|351705745|gb|EHB08664.1| RNA-binding protein 28 [Heterocephalus glaber]
Length = 758
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 37/50 (74%), Gaps = 2/50 (4%)
Query: 27 DYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLN 76
D +++VFS++G V V++P+ K GK++GFAFV+F EA KAL+ G+N
Sbjct: 128 DDLKTVFSQFGAVLEVNIPR-KPDGKMRGFAFVQFKNLLEAGKALK-GMN 175
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 28/52 (53%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
LPP A + +E +FS+ G V + K + +GF +V FS E+ +AL
Sbjct: 11 LPPSARSEQLEELFSQVGPVKQCFVVTEKGSKACRGFGYVTFSMLEDVQRAL 62
>gi|361131014|gb|EHL02744.1| putative Eukaryotic translation initiation factor 3 subunit G
[Glarea lozoyensis 74030]
Length = 327
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
AE + +F ++G+VT V L K + TG KGFAF+ F + +A KA E
Sbjct: 258 AEEQELRDMFERFGRVTRVFLAKDRETGMAKGFAFISFQERTDAAKACE 306
>gi|323507689|emb|CBQ67560.1| related to RNA-binding region containing protein 2 [Sporisorium
reilianum SRZ2]
Length = 659
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 30/44 (68%)
Query: 29 IESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+++VF +G++ YV L + TGK KGF F++F E+A KALE
Sbjct: 425 VKAVFEPFGEIEYVDLHREPGTGKSKGFCFIQFKYPEDAKKALE 468
>gi|281427346|ref|NP_001163962.1| RNA binding motif protein 19 [Xenopus (Silurana) tropicalis]
gi|189442184|gb|AAI67335.1| Unknown (protein for MGC:135501) [Xenopus (Silurana) tropicalis]
Length = 542
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 3 ELVENNKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFS 62
EL E+ + GR+ ++ LP D +E +FSKYG ++ + P T K KGFAFV F
Sbjct: 377 ELQEDVSESGRLFVR-NLPYTCNEDDLEKLFSKYGPISEIHFPIDSLTKKPKGFAFVTFL 435
Query: 63 TKEEATKA 70
E A KA
Sbjct: 436 ITEHAVKA 443
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
R+++K LP + D +F+ +G +T SL K+ GK + F F+ F ++EEA AL
Sbjct: 3 RLIVK-NLPNGIKEDRFRELFAAFGTLTDCSL-KYTKDGKFRKFGFIGFVSEEEAKAAL 59
>gi|343495650|ref|ZP_08733789.1| RNA-binding protein [Vibrio nigripulchritudo ATCC 27043]
gi|342822633|gb|EGU57333.1| RNA-binding protein [Vibrio nigripulchritudo ATCC 27043]
Length = 147
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLNPCP 79
LP +A ++ +FSK+G+V V L K K TGK +GF FV S +E+A K ++ GLN
Sbjct: 68 LPYKANETHVRQLFSKHGQVFAVRLMKDKRTGKRRGFGFVVVS-REDADKVIQ-GLN--E 123
Query: 80 TDYQSSIL 87
DY L
Sbjct: 124 QDYMERTL 131
>gi|225678061|gb|EEH16345.1| polyadenylate-binding protein [Paracoccidioides brasiliensis Pb03]
Length = 755
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 32/58 (55%)
Query: 15 VLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
V + L PE ++ +F KYG++T SL + TGK +GF FV F + A A+E
Sbjct: 237 VYVKNLEPEVTNEEFRELFEKYGEITSASLSRDNETGKSRGFGFVNFVNHDSAAAAVE 294
>gi|156045113|ref|XP_001589112.1| hypothetical protein SS1G_09745 [Sclerotinia sclerotiorum 1980]
gi|238686685|sp|A7EWN6.1|EIF3G_SCLS1 RecName: Full=Eukaryotic translation initiation factor 3 subunit G;
Short=eIF3g; AltName: Full=Eukaryotic translation
initiation factor 3 RNA-binding subunit; Short=eIF-3
RNA-binding subunit; AltName: Full=Translation
initiation factor eIF3 p33 subunit homolog; Short=eIF3
p33 homolog
gi|154694140|gb|EDN93878.1| hypothetical protein SS1G_09745 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 288
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
AE + +F ++G+VT V L K + TG KGFAF+ F + +A KA E
Sbjct: 219 AEEQELRDMFERFGRVTRVFLAKDRETGLAKGFAFISFQERSDAAKACE 267
>gi|189234753|ref|XP_974490.2| PREDICTED: similar to STE20-like kinase (yeast) [Tribolium
castaneum]
Length = 1819
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 3 ELVENNKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFS 62
E+ E K+Y R+ + + P+ D I+SVF +G + Y L + S K KG+ F+E+
Sbjct: 187 EIQEEAKQYNRIYVAS-IHPDLTEDDIKSVFEAFGPIIYCKLAQGSSGHKHKGYGFIEYE 245
Query: 63 TKEEATKAL 71
T + A +A+
Sbjct: 246 TAQAANEAI 254
Score = 34.3 bits (77), Expect = 9.2, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 26/50 (52%)
Query: 23 EAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
E + D I F +G + +++ T K KGFAFVE+ E A ALE
Sbjct: 108 ELKEDTIRQSFLPFGPIKSINMSWDPVTQKHKGFAFVEYEIPEAAQLALE 157
>gi|154298414|ref|XP_001549630.1| eukaryotic translation initiation factor 3, subunit 4 [Botryotinia
fuckeliana B05.10]
gi|229463755|sp|A6SGN8.1|EIF3G_BOTFB RecName: Full=Eukaryotic translation initiation factor 3 subunit G;
Short=eIF3g; AltName: Full=Eukaryotic translation
initiation factor 3 RNA-binding subunit; Short=eIF-3
RNA-binding subunit; AltName: Full=Translation
initiation factor eIF3 p33 subunit homolog; Short=eIF3
p33 homolog
gi|347840767|emb|CCD55339.1| similar to eukaryotic translation initiation factor 3 subunit g
[Botryotinia fuckeliana]
Length = 288
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
AE + +F ++G+VT V L K + TG KGFAF+ F + +A KA E
Sbjct: 219 AEEQELRDMFERFGRVTRVFLAKDRETGLAKGFAFISFQERSDAAKACE 267
>gi|87124729|ref|ZP_01080577.1| RNA-binding protein RbpD [Synechococcus sp. RS9917]
gi|86167608|gb|EAQ68867.1| RNA-binding protein RbpD [Synechococcus sp. RS9917]
Length = 112
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 33/50 (66%)
Query: 23 EAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+AE + + +F++YG+V SLP + TG+ +GFAFVE + + KA++
Sbjct: 11 QAEQEDLLDLFNQYGEVKSASLPLDRETGRKRGFAFVEMNNDSDEQKAID 60
>gi|449450504|ref|XP_004143002.1| PREDICTED: uncharacterized protein LOC101216322 [Cucumis sativus]
Length = 257
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 30/46 (65%)
Query: 27 DYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
D + +F KYGKV V +P+ + TG +GFAFV + +EA KA++
Sbjct: 30 DDLYPLFDKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAID 75
>gi|331228813|ref|XP_003327073.1| hypothetical protein PGTG_08850 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309306063|gb|EFP82654.1| hypothetical protein PGTG_08850 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 637
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 33/55 (60%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELG 74
LP A D + +F++YG V V LP T ++KGF +VEF+T E A A+E G
Sbjct: 466 LPFSATQDSVWEIFAEYGDVNSVRLPTDPETQRVKGFGYVEFATLESARAAVEKG 520
>gi|159128731|gb|EDP53845.1| pre-mRNA splicing factor (Prp24), putative [Aspergillus fumigatus
A1163]
Length = 1303
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
GR + + +A D ++ VF KYG + V +P+ K G KGF ++ FSTKEEA AL
Sbjct: 1000 GREIHISNIDWKANEDDLKEVFQKYGTIETVRIPR-KVDGGSKGFGYIVFSTKEEAETAL 1058
Query: 72 EL 73
+
Sbjct: 1059 AM 1060
Score = 34.7 bits (78), Expect = 7.5, Method: Composition-based stats.
Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
G + P A+ YI+++F +YG++ + P K + F +V+F + +A A
Sbjct: 909 GSTLFVTNFPSTADESYIQNLFREYGEIVDIRFPSLKYNTHRR-FCYVQFKSSGDAHNAT 967
Query: 72 EL 73
L
Sbjct: 968 RL 969
>gi|164657987|ref|XP_001730119.1| hypothetical protein MGL_2501 [Malassezia globosa CBS 7966]
gi|159104014|gb|EDP42905.1| hypothetical protein MGL_2501 [Malassezia globosa CBS 7966]
Length = 664
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 2 AELVENNKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEF 61
A++ E Y V +K L P + E +F KYGK+T ++ GK +GF FV F
Sbjct: 250 AKIEEARAHYTNVYVK-NLDPAVTQEEFEKLFEKYGKITSAAIAT-DQEGKSRGFGFVNF 307
Query: 62 STKEEATKALE 72
S E+A KA+E
Sbjct: 308 SEHEQAAKAVE 318
>gi|452836303|gb|EME38247.1| hypothetical protein DOTSEDRAFT_75720 [Dothistroma septosporum
NZE10]
Length = 299
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 32/49 (65%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
AE + +F ++G+VT V L K + TG+ KGFAFV ++ + +A +A E
Sbjct: 230 AEEADLREMFERWGRVTRVFLAKDRETGRAKGFAFVSYADRSDAARACE 278
>gi|388852481|emb|CCF53883.1| related to RNA-binding region containing protein 2 [Ustilago
hordei]
Length = 678
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 30/44 (68%)
Query: 29 IESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+++VF +G++ YV L + TGK KGF F++F E+A KALE
Sbjct: 443 VKAVFEPFGEIEYVDLHREPGTGKSKGFCFIQFKHAEDAKKALE 486
>gi|70988933|ref|XP_749317.1| pre-mRNA splicing factor (Prp24) [Aspergillus fumigatus Af293]
gi|66846948|gb|EAL87279.1| pre-mRNA splicing factor (Prp24), putative [Aspergillus fumigatus
Af293]
Length = 1303
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
GR + + +A D ++ VF KYG + V +P+ K G KGF ++ FSTKEEA AL
Sbjct: 1000 GREIHISNIDWKANEDDLKEVFQKYGTIETVRIPR-KVDGGSKGFGYIVFSTKEEAETAL 1058
Query: 72 EL 73
+
Sbjct: 1059 AM 1060
Score = 34.7 bits (78), Expect = 7.8, Method: Composition-based stats.
Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
G + P A+ YI+++F +YG++ + P K + F +V+F + +A A
Sbjct: 909 GSTLFVTNFPSTADESYIQNLFREYGEIVDIRFPSLKYNTHRR-FCYVQFKSSGDAHNAT 967
Query: 72 EL 73
L
Sbjct: 968 RL 969
>gi|388519919|gb|AFK48021.1| unknown [Medicago truncatula]
Length = 281
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 30/41 (73%)
Query: 32 VFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+F KYGKV + +PK + TG+ +GFAFV + +EA+KA++
Sbjct: 35 LFDKYGKVVDIFIPKDRRTGESRGFAFVRYKYADEASKAVD 75
>gi|367022312|ref|XP_003660441.1| hypothetical protein MYCTH_2314155 [Myceliophthora thermophila ATCC
42464]
gi|347007708|gb|AEO55196.1| hypothetical protein MYCTH_2314155 [Myceliophthora thermophila ATCC
42464]
Length = 295
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
AE + +F ++G+VT V L K + TG KGFAF+ ++ +E+A KA
Sbjct: 226 AEEQELREMFERFGRVTRVFLAKDRDTGLAKGFAFISYADREDAIKAC 273
>gi|217073798|gb|ACJ85259.1| unknown [Medicago truncatula]
Length = 280
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 30/41 (73%)
Query: 32 VFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+F KYGKV + +PK + TG+ +GFAFV + +EA+KA++
Sbjct: 35 LFDKYGKVVDIFIPKDRRTGESRGFAFVRYKYADEASKAVD 75
>gi|408390203|gb|EKJ69609.1| hypothetical protein FPSE_10205 [Fusarium pseudograminearum CS3096]
Length = 1080
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 32/88 (36%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
GR + L ++ VFSKYG +T V++P GK KGFAF++F+ KE A KA+
Sbjct: 771 GREIHISNLDRSISETELKEVFSKYGNITRVNIPA-TLAGKNKGFAFIDFAAKEGAEKAV 829
Query: 72 ELGLNPCPTDYQSSILTTTSRLSFGITP 99
N T ++S IL I P
Sbjct: 830 AEMNN---TKFRSQILAVALSKESRIKP 854
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 21 PPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALEL 73
PP A+ +YI ++F G++ + P K + F +V F +E + KA+EL
Sbjct: 682 PPAADQNYIRNLFRDCGEILSIRWPSLKVNTHRR-FCYVSFRDQEASAKAVEL 733
>gi|443477394|ref|ZP_21067245.1| RNP-1 like RNA-binding protein [Pseudanabaena biceps PCC 7429]
gi|443017490|gb|ELS31918.1| RNP-1 like RNA-binding protein [Pseudanabaena biceps PCC 7429]
Length = 95
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEF--STKEEATKA 70
L +A D + SVFS YG V V LP + TG+++GFAFV+ +EEA A
Sbjct: 8 LSYQAAKDDLTSVFSDYGTVKRVQLPTDQETGRVRGFAFVDMEDDAQEEAAIA 60
>gi|428200576|ref|YP_007079165.1| RRM domain-containing RNA-binding protein [Pleurocapsa sp. PCC
7327]
gi|427978008|gb|AFY75608.1| RRM domain-containing RNA-binding protein [Pleurocapsa sp. PCC
7327]
Length = 93
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 35/49 (71%)
Query: 23 EAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
+A + +E +F++YG V V LP + TG+++GFAFV+ S++++ +A+
Sbjct: 11 QAAKEDLEEIFAEYGIVKKVVLPLDRETGRMRGFAFVDLSSEDQEEQAI 59
>gi|301755236|ref|XP_002913467.1| PREDICTED: RNA-binding protein 28-like [Ailuropoda melanoleuca]
gi|281348807|gb|EFB24391.1| hypothetical protein PANDA_001275 [Ailuropoda melanoleuca]
Length = 751
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 41/62 (66%), Gaps = 2/62 (3%)
Query: 10 KYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATK 69
K R++++ L + D +++VF++YG V V++P+ K GK++GFAFV+F EA K
Sbjct: 112 KKARLIIRN-LSFKCSEDDLKTVFAQYGAVLEVNIPR-KPDGKMRGFAFVQFKNLLEAGK 169
Query: 70 AL 71
AL
Sbjct: 170 AL 171
>gi|318041575|ref|ZP_07973531.1| RNA-binding protein [Synechococcus sp. CB0101]
Length = 90
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 35/50 (70%)
Query: 23 EAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+AE + ++S+F++YG V S+P + TG+ +GFAFVE + + + KA++
Sbjct: 11 DAEVEDLQSLFAEYGAVRKCSVPLDRDTGRKRGFAFVEMAQEADEQKAID 60
>gi|295674319|ref|XP_002797705.1| polyadenylate-binding protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226280355|gb|EEH35921.1| polyadenylate-binding protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 822
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 32/58 (55%)
Query: 15 VLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
V + L PE ++ +F KYG++T SL + TGK +GF FV F + A A+E
Sbjct: 237 VYVKNLEPEVTNEEFRELFEKYGEITSASLSRDNETGKSRGFGFVNFVNHDSAAAAVE 294
>gi|291232095|ref|XP_002735981.1| PREDICTED: RBD (RNA binding domain) protein family member
(rbd-1)-like [Saccoglossus kowalevskii]
Length = 861
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 15 VLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKA 70
+L LP EA I+ +FS +G++ + +PK K++G +GF FV+F TK++A +A
Sbjct: 741 ILVRNLPFEATRREIQELFSTFGEIKSIRIPK-KASGTHRGFGFVDFLTKQDAKRA 795
>gi|170591857|ref|XP_001900686.1| Snf5 [Brugia malayi]
gi|158591838|gb|EDP30441.1| Snf5, putative [Brugia malayi]
Length = 539
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
G +V + EA D + FS+YG++ ++L + TG LKG+A VE+ T++EA A+
Sbjct: 450 GWIVFVTNVHEEAHEDDVYERFSEYGEIKNMNLNIDRRTGFLKGYALVEYETQKEAFAAI 509
Query: 72 ELGLN 76
E GLN
Sbjct: 510 E-GLN 513
>gi|255581357|ref|XP_002531488.1| serine/arginine rich splicing factor, putative [Ricinus communis]
gi|223528897|gb|EEF30895.1| serine/arginine rich splicing factor, putative [Ricinus communis]
Length = 257
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 28/41 (68%)
Query: 32 VFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+F KYGKV + +P+ + TG +GFAFV + +EA KA+E
Sbjct: 35 LFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVE 75
>gi|123976178|ref|XP_001314467.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121896817|gb|EAY01957.1| hypothetical protein TVAG_430980 [Trichomonas vaginalis G3]
Length = 199
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 22/93 (23%)
Query: 1 MAELVENNKKYGRVVLKEKLPPEAEHDY----------------------IESVFSKYGK 38
M+ +N+K+Y R E++ E ++D +++ F+++G
Sbjct: 1 MSGSEDNSKEYDRRSDDEEVSKEEKNDSESKSSTVTIHVGNLSFDTTEESLKAKFAEFGN 60
Query: 39 VTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
V +P+ TGK K F FVEFSTKE+A KA+
Sbjct: 61 VVTCRIPRRTRTGKSKSFGFVEFSTKEDADKAI 93
>gi|3334756|emb|CAA76346.1| putative arginine/serine-rich splicing factor [Medicago sativa
subsp. x varia]
Length = 286
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 30/41 (73%)
Query: 32 VFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+F KYGKV + +PK + TG+ +GFAFV + +EA+KA++
Sbjct: 35 LFDKYGKVVDIFIPKDRRTGESRGFAFVRYKYADEASKAVD 75
>gi|425445615|ref|ZP_18825643.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC
9443]
gi|389734381|emb|CCI01971.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC
9443]
Length = 97
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
LP E + + + VF++YG + V P + TG+ +GFAFVE T E+ + A+
Sbjct: 8 LPFEVDQNDVVEVFTEYGTIKRVHFPMERETGRKRGFAFVEMETPEQESAAI 59
>gi|339244733|ref|XP_003378292.1| putative RNA recognition motif protein [Trichinella spiralis]
gi|316972816|gb|EFV56463.1| putative RNA recognition motif protein [Trichinella spiralis]
Length = 503
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 37/70 (52%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
GR + LP + +D ++ FS++G + Y + ++ T KG F++F TKE A K L
Sbjct: 168 GRTLFVRHLPFDVTNDTLKEYFSRFGPLKYALVCRYSGTDHSKGTGFIQFLTKEAAQKCL 227
Query: 72 ELGLNPCPTD 81
E N ++
Sbjct: 228 EAANNASESE 237
>gi|123965247|ref|YP_001010328.1| RNA recognition motif-containing protein [Prochlorococcus marinus
str. MIT 9515]
gi|123199613|gb|ABM71221.1| RNA-binding region RNP-1 (RNA recognition motif) [Prochlorococcus
marinus str. MIT 9515]
Length = 222
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 33/54 (61%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
LP AE + I +F+ YG+V SLP + TG+ +GFAFVE + + T A+E
Sbjct: 7 NLPFRAEREDILELFTPYGEVMNCSLPLERDTGRKRGFAFVEMADEALETTAIE 60
>gi|50305507|ref|XP_452713.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641846|emb|CAH01564.1| KLLA0C11495p [Kluyveromyces lactis]
Length = 445
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 32/50 (64%)
Query: 23 EAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
EA+ D + +F KYG++ V +P T + KGF +V++ + E+ATKA E
Sbjct: 307 EADRDNLYEIFGKYGEIVSVRIPTHPETEQPKGFGYVQYGSIEDATKAFE 356
>gi|416401897|ref|ZP_11687293.1| RNA-binding protein [Crocosphaera watsonii WH 0003]
gi|357261987|gb|EHJ11191.1| RNA-binding protein [Crocosphaera watsonii WH 0003]
Length = 94
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 31/43 (72%)
Query: 29 IESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
+E VF++YG V V +PK + +G+++GFAFVE + ++ +A+
Sbjct: 17 LEEVFTEYGSVKRVHIPKDRESGRVRGFAFVEMDSDDQEQEAI 59
>gi|282896319|ref|ZP_06304341.1| RNA-binding region protein RNP-1 [Raphidiopsis brookii D9]
gi|281198815|gb|EFA73694.1| RNA-binding region protein RNP-1 [Raphidiopsis brookii D9]
Length = 104
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 29 IESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
++S FSKYG V+ V LP + TG+ +GF FVE S + E A++
Sbjct: 17 LKSAFSKYGNVSKVQLPTDRETGRPRGFGFVEMSNEAEENAAID 60
>gi|428300369|ref|YP_007138675.1| RNP-1 like RNA-binding protein [Calothrix sp. PCC 6303]
gi|428236913|gb|AFZ02703.1| RNP-1 like RNA-binding protein [Calothrix sp. PCC 6303]
Length = 115
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 29/46 (63%)
Query: 26 HDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
D + VFS+YG VT V LP + TG+++GF FVE ++ T A+
Sbjct: 14 QDDLTKVFSEYGTVTRVQLPTDRETGRVRGFGFVEMESEAAETAAI 59
>gi|282900575|ref|ZP_06308517.1| RNA-binding region protein RNP-1 [Cylindrospermopsis raciborskii
CS-505]
gi|281194375|gb|EFA69330.1| RNA-binding region protein RNP-1 [Cylindrospermopsis raciborskii
CS-505]
Length = 103
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 30/44 (68%)
Query: 29 IESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
++S FSKYG V+ V LP K TG+ +GF FV+ S++ E A++
Sbjct: 17 LKSAFSKYGNVSKVQLPTDKETGRPRGFGFVDMSSEAEENAAID 60
>gi|2565362|gb|AAB81985.1| Sex-lethal protein [Musca domestica]
Length = 318
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 34/61 (55%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLNPC 78
LP D +E +F KYG + ++ + K TG+ +G AFV F+ +EEA +A+ N
Sbjct: 187 NLPRTITDDELEKIFGKYGNIVQKNILRDKLTGRPRGVAFVRFNKREEAQEAISALNNVI 246
Query: 79 P 79
P
Sbjct: 247 P 247
>gi|226287551|gb|EEH43064.1| polyadenylate-binding protein [Paracoccidioides brasiliensis Pb18]
Length = 761
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 32/58 (55%)
Query: 15 VLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
V + L PE ++ +F KYG++T SL + TGK +GF FV F + A A+E
Sbjct: 237 VYVKNLEPEVTNEEFRELFEKYGEITSASLSRDNETGKSRGFGFVNFVNHDSAAAAVE 294
>gi|388854914|emb|CCF51417.1| probable PAB1-mRNA polyadenylate-binding protein [Ustilago hordei]
Length = 648
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 2 AELVENNKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEF 61
A++ E+ K+ V K + PE + E +F+ YGK+T L + GK KGF FV F
Sbjct: 215 AKIEESRAKFTNVYCK-NVDPEVTDEQFEKLFTNYGKITSCVLQR-DDDGKSKGFGFVNF 272
Query: 62 STKEEATKALE 72
EEA KA++
Sbjct: 273 EDHEEAQKAVD 283
>gi|123455020|ref|XP_001315258.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121897929|gb|EAY03035.1| hypothetical protein TVAG_143350 [Trichomonas vaginalis G3]
Length = 156
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 26 HDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALEL 73
D +++VF KYG +T V +P+ + KGF FVEF +E+A KA E+
Sbjct: 39 EDGLKAVFEKYGNITSVRIPR-NDRDQSKGFGFVEFENEEDAKKACEM 85
>gi|254432068|ref|ZP_05045771.1| RNA-binding protein RbpD [Cyanobium sp. PCC 7001]
gi|197626521|gb|EDY39080.1| RNA-binding protein RbpD [Cyanobium sp. PCC 7001]
Length = 119
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 32/50 (64%)
Query: 23 EAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+AE + + +F +YG+V SLP + TG+ +GFAFVE + + KA++
Sbjct: 11 QAEREDLLDLFGQYGEVRQCSLPLDRETGRKRGFAFVELANDADEQKAID 60
>gi|357631741|gb|EHJ79210.1| sex-lethal [Danaus plexippus]
Length = 333
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 31/53 (58%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
LP D +E++F KYG++ + + KS G +G AFV F +EEA +A+
Sbjct: 153 NLPRAITEDQLETIFGKYGRIVQKHILRDKSNGTPRGVAFVRFDKREEAQEAI 205
>gi|328773933|gb|EGF83970.1| hypothetical protein BATDEDRAFT_36405 [Batrachochytrium
dendrobatidis JAM81]
Length = 217
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
R + +PP+A + F +YGKV + +PK G+ +GFA+V+F +E+A A+
Sbjct: 3 ARSIYVRGVPPDASSSDLMEHFEEYGKVNDIYIPKSYHNGRPRGFAYVKFDKQEDAELAM 62
Query: 72 E 72
E
Sbjct: 63 E 63
>gi|156395189|ref|XP_001636994.1| predicted protein [Nematostella vectensis]
gi|156224102|gb|EDO44931.1| predicted protein [Nematostella vectensis]
Length = 86
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%)
Query: 27 DYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
D+++ +FS YG+V V LP ++ +GFA+VE+ EE KAL+
Sbjct: 15 DHVQEIFSVYGRVKTVDLPTDRTNNLSRGFAYVEYVDPEECEKALK 60
>gi|332022211|gb|EGI62526.1| Poly(U)-binding-splicing factor half pint [Acromyrmex echinatior]
Length = 609
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 3 ELVENNKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFS 62
E+ E +K Y R+ + + + D I+SVF +G +TY L + S + KG+ F+E+
Sbjct: 225 EITEESKHYNRIYIAS-IHQDLTEDDIKSVFEAFGPITYCKLAQGSSPHRHKGYGFIEYE 283
Query: 63 TKEEATKAL 71
T + A +A+
Sbjct: 284 TMQAALEAI 292
Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 26/50 (52%)
Query: 23 EAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
E + D I F +G + +++ T K KGFAFVE+ E A ALE
Sbjct: 146 ELKEDTIRQAFLPFGPIKSINMSWDPVTQKHKGFAFVEYEIPEAAQLALE 195
>gi|302920668|ref|XP_003053121.1| hypothetical protein NECHADRAFT_59146 [Nectria haematococca mpVI
77-13-4]
gi|256734061|gb|EEU47408.1| hypothetical protein NECHADRAFT_59146 [Nectria haematococca mpVI
77-13-4]
Length = 742
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 15 VLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
V + + PEA D +F +YG VT SL + GK +GF FV F+T E A KA++
Sbjct: 243 VYVKNISPEATEDDFRQLFEQYGDVTSSSLAR-DQEGKSRGFGFVNFTTHESAAKAVD 299
>gi|209528246|ref|ZP_03276711.1| RNP-1 like RNA-binding protein [Arthrospira maxima CS-328]
gi|376004999|ref|ZP_09782569.1| Glycine-rich RNA-binding protein, rbp-like [Arthrospira sp. PCC
8005]
gi|423065550|ref|ZP_17054340.1| RNP-1 like RNA-binding protein [Arthrospira platensis C1]
gi|209491318|gb|EDZ91708.1| RNP-1 like RNA-binding protein [Arthrospira maxima CS-328]
gi|375326593|emb|CCE18322.1| Glycine-rich RNA-binding protein, rbp-like [Arthrospira sp. PCC
8005]
gi|406712993|gb|EKD08168.1| RNP-1 like RNA-binding protein [Arthrospira platensis C1]
Length = 100
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALEL--GLNP 77
L E + + +VF++YG V V LP + TG+++GF FVE T+ E A++ G
Sbjct: 8 LSYEVTEEDLTAVFAEYGAVKRVKLPTDRETGRMRGFGFVEMDTEAEEQSAIDALDGAEW 67
Query: 78 CPTDYQ 83
C D +
Sbjct: 68 CGRDLR 73
>gi|321464387|gb|EFX75395.1| sex-lethal protein variant 2 [Daphnia pulex]
Length = 297
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 32/54 (59%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
LP + D + ++FS +G + ++L K K TG +G AFV F +EEA A+E
Sbjct: 119 NLPRDVTEDELTNIFSAHGNIVQMNLLKDKITGMPRGVAFVRFDKREEALAAIE 172
>gi|172038014|ref|YP_001804515.1| RNA-binding protein [Cyanothece sp. ATCC 51142]
gi|171699468|gb|ACB52449.1| RNA-binding protein [Cyanothece sp. ATCC 51142]
Length = 108
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 28/44 (63%)
Query: 29 IESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+E VF +YG V V +P + TGK +GF FVE T+ E T A+E
Sbjct: 31 LEEVFGEYGTVKRVQIPSDRETGKSRGFGFVEMGTETEETAAIE 74
>gi|172036857|ref|YP_001803358.1| RNA-binding protein [Cyanothece sp. ATCC 51142]
gi|354554661|ref|ZP_08973965.1| RNP-1 like RNA-binding protein [Cyanothece sp. ATCC 51472]
gi|171698311|gb|ACB51292.1| RNA-binding protein [Cyanothece sp. ATCC 51142]
gi|353553470|gb|EHC22862.1| RNP-1 like RNA-binding protein [Cyanothece sp. ATCC 51472]
Length = 81
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 29/54 (53%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
LP E + VFS YG V V +P + TG+ +GFAFVE K T A+E
Sbjct: 7 NLPYEVTEADLNFVFSDYGSVKRVHVPTDRDTGRPRGFAFVELEQKANETNAIE 60
>gi|406700097|gb|EKD03282.1| hypothetical protein A1Q2_02392 [Trichosporon asahii var. asahii
CBS 8904]
Length = 387
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 29/53 (54%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
LP + D+I F +YG V V LP + TG KGF +V F +AT ALE
Sbjct: 309 LPFDTTEDHIYETFGEYGDVQSVRLPTDRETGAAKGFGYVTFGDVAQATAALE 361
>gi|449549543|gb|EMD40508.1| hypothetical protein CERSUDRAFT_44938, partial [Ceriporiopsis
subvermispora B]
Length = 151
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 32/53 (60%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
L PE + ++FS+YG+V V+LP+ K TGK KGF F+ + + A++
Sbjct: 37 LNPELTEGDVITIFSQYGEVMDVNLPRHKDTGKTKGFGFLMYEDQRSTVLAVD 89
>gi|37359248|gb|AAN77868.1| putative heterogeneous nuclear ribonucleoprotein [Vitis vinifera]
Length = 342
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 47/97 (48%), Gaps = 12/97 (12%)
Query: 2 AELVENNKKYGRVVLKEK------------LPPEAEHDYIESVFSKYGKVTYVSLPKFKS 49
AE+V+ + V KE+ L +A D ++ VFS+ G+VT V L
Sbjct: 8 AEMVDAEDEEHHEVFKERRKRKEFEVFVGGLDKDATEDDLKKVFSQVGEVTEVRLMMNPQ 67
Query: 50 TGKLKGFAFVEFSTKEEATKALELGLNPCPTDYQSSI 86
T K KGFAF+ F+T E+A +A+ NP Q +
Sbjct: 68 TKKNKGFAFLRFATVEQAKRAVTELKNPVVNGKQCGV 104
Score = 35.0 bits (79), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 27/56 (48%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAT 68
+ V + LP + D + + KYG++ + L + + K K F FV F T + A
Sbjct: 208 KTVFIDGLPASWDEDRVRELLKKYGEIEKIELARNMPSAKRKDFGFVTFDTHDAAV 263
>gi|359472780|ref|XP_002275485.2| PREDICTED: probable RNA-binding protein 19-like [Vitis vinifera]
Length = 983
Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 26/61 (42%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
GR+ ++ LP A D +E +FSK+G V+ V L K T + KG A+V F+ E A +AL
Sbjct: 445 GRLFVR-NLPYTATEDELEELFSKFGNVSQVHLVVNKDTKRSKGIAYVLFTLPESAVRAL 503
Query: 72 E 72
E
Sbjct: 504 E 504
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 41/69 (59%), Gaps = 5/69 (7%)
Query: 5 VENNKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLP-KFKSTGKLKGFAFVEFST 63
V+ +K +++++ E D + +FS +G++ + LP KF G +GFAFVEF T
Sbjct: 855 VDKDKSSTKLIVRNVAFEATEKD-LRQLFSPFGQIKSLRLPMKF---GSHRGFAFVEFVT 910
Query: 64 KEEATKALE 72
K+EA AL+
Sbjct: 911 KQEAQNALQ 919
Score = 36.6 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
G + + LP D + FS+ G++T L + K GK + FAF+ F T++EA +AL
Sbjct: 118 GSRICVKNLPKYVAEDRLRDHFSQKGEITDAKLMRTKE-GKSRQFAFIGFRTEQEAEEAL 176
Query: 72 EL 73
+
Sbjct: 177 KF 178
>gi|341896374|gb|EGT52309.1| CBN-EIF-3.G protein [Caenorhabditis brenneri]
Length = 262
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%)
Query: 5 VENNKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTK 64
++ N+ LP E D + VF K G+V + + + K T KGFAFV F ++
Sbjct: 174 IDRNRSDENTCRVTNLPQEMNEDELRDVFGKIGRVIRIFIARDKITALPKGFAFVTFESR 233
Query: 65 EEATKAL 71
++A +A+
Sbjct: 234 DDAARAI 240
>gi|168064593|ref|XP_001784245.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664211|gb|EDQ50939.1| predicted protein [Physcomitrella patens subsp. patens]
gi|448878415|gb|AGE46170.1| arginine/serine-rich splicing factor SC37 transcript I
[Physcomitrella patens subsp. patens]
gi|448878417|gb|AGE46171.1| arginine/serine-rich splicing factor SC37 transcript II
[Physcomitrella patens subsp. patens]
Length = 319
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%)
Query: 27 DYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
D + +F +YGKV + +P+ + TG+ +GFAFV + +EA KA+E
Sbjct: 30 DDLYPLFDRYGKVVDIFIPRDRRTGESRGFAFVRYKYADEAQKAIE 75
>gi|357490717|ref|XP_003615646.1| Splicing factor, arginine/serine-rich [Medicago truncatula]
gi|217073250|gb|ACJ84984.1| unknown [Medicago truncatula]
gi|355516981|gb|AES98604.1| Splicing factor, arginine/serine-rich [Medicago truncatula]
Length = 267
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 30/41 (73%)
Query: 32 VFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+F KYGKV + +P+ + TG+ +GFAFV + +EA+KA++
Sbjct: 35 LFDKYGKVVDIFIPRDRRTGESRGFAFVRYKYADEASKAVD 75
>gi|428207505|ref|YP_007091858.1| RNP-1 like RNA-binding protein [Chroococcidiopsis thermalis PCC
7203]
gi|428009426|gb|AFY87989.1| RNP-1 like RNA-binding protein [Chroococcidiopsis thermalis PCC
7203]
Length = 89
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 31/56 (55%)
Query: 18 EKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALEL 73
E L E E D ++ +F +YG V V +P TGK +GFA VE T E A+++
Sbjct: 6 ENLSSEVEEDDLKRIFLEYGTVKQVHIPTNHKTGKNRGFAVVEMETCAEEISAVQM 61
>gi|393763707|ref|ZP_10352323.1| hypothetical protein AGRI_11977 [Alishewanella agri BL06]
gi|392605375|gb|EIW88270.1| hypothetical protein AGRI_11977 [Alishewanella agri BL06]
Length = 165
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKE 65
LP A D ++++FS+YG V V L K + TG+ +GF FVE + +
Sbjct: 84 NLPYRANEDAVKALFSRYGTVVNVRLMKDRQTGRRRGFGFVEVAAAD 130
>gi|448878419|gb|AGE46172.1| arginine/serine-rich splicing factor SC37 transcript III
[Physcomitrella patens subsp. patens]
Length = 257
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%)
Query: 27 DYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
D + +F +YGKV + +P+ + TG+ +GFAFV + +EA KA+E
Sbjct: 30 DDLYPLFDRYGKVVDIFIPRDRRTGESRGFAFVRYKYADEAQKAIE 75
>gi|428672360|gb|EKX73274.1| RNA recognition motif domain containing protein [Babesia equi]
Length = 112
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 37/61 (60%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
G +VL + EA+ + + VF YG V+ V L + +G +KG+A +E+ ++EEA A+
Sbjct: 28 GWIVLVTGVHEEAQEEDVRDVFENYGTVSSVHLNLDRRSGYVKGYALLEYKSREEAQSAI 87
Query: 72 E 72
+
Sbjct: 88 D 88
>gi|145347604|ref|XP_001418253.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578482|gb|ABO96546.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 107
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
G +VL + EA+ D + F+ +G++ + L + TG +KG+A VE+ TK EA A+
Sbjct: 26 GWIVLVTGVHEEAQEDDVHEAFADFGEIKNLHLNLDRRTGYVKGYALVEYDTKAEAQAAI 85
Query: 72 E 72
+
Sbjct: 86 D 86
>gi|434399674|ref|YP_007133678.1| RNP-1 like RNA-binding protein [Stanieria cyanosphaera PCC 7437]
gi|428270771|gb|AFZ36712.1| RNP-1 like RNA-binding protein [Stanieria cyanosphaera PCC 7437]
Length = 94
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
L E +E VF++YG V V LP + TG+ +GFAFVE T+ E A+
Sbjct: 8 LDYEISQQDLEEVFTEYGTVKRVHLPTDRETGRKRGFAFVEMGTEAEEASAI 59
>gi|159163840|pdb|2CPH|A Chain A, Solution Structure Of The C-Terminal Rna Recognition
Motif Of Hypothetical Rna-Binding Protein Rbm19
Length = 107
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 15 VLKEKLPPEAEHDYIESVFSKYGKVTYVSLPK-FKSTGKLKGFAFVEFSTKEEATKALE 72
+L +P +A I +FS +G++ V LPK TG +GF FV+F TK++A KA
Sbjct: 18 ILVRNIPFQANQREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKKAFN 76
>gi|167517425|ref|XP_001743053.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778152|gb|EDQ91767.1| predicted protein [Monosiga brevicollis MX1]
Length = 1117
Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 5/66 (7%)
Query: 6 ENNKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKE 65
++NK R + E P E ++ +FS +G + V LP+ + G +GFAF+EFSTK+
Sbjct: 1003 KSNKLVVRNIAFEATPKE-----VQQLFSPHGNIVSVRLPRKQYDGTHRGFAFIEFSTKQ 1057
Query: 66 EATKAL 71
EA A
Sbjct: 1058 EARDAF 1063
Score = 37.0 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 6 ENNKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKE 65
E+ + GR+ ++ LP D + +F +G ++ + +P T K KGFAF+ F E
Sbjct: 533 EDIGESGRLFVR-NLPYACREDELRELFEAFGPLSELHMPIDGETKKPKGFAFITFVLPE 591
Query: 66 EATKALE 72
A++A +
Sbjct: 592 HASQAFQ 598
>gi|428214099|ref|YP_007087243.1| RRM domain-containing RNA-binding protein [Oscillatoria acuminata
PCC 6304]
gi|428002480|gb|AFY83323.1| RRM domain-containing RNA-binding protein [Oscillatoria acuminata
PCC 6304]
Length = 104
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 33/54 (61%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
L E + + +VF++YG V V LP + TG+ +GFAFVE ++ E T A+E
Sbjct: 7 NLSYEVTQEDLTAVFAEYGSVQRVHLPTDRETGRPRGFAFVEMKSETEETAAIE 60
>gi|427419443|ref|ZP_18909626.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
7375]
gi|425762156|gb|EKV03009.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
7375]
Length = 86
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 26 HDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+ I+ VF+ YG V V++P + TG+ +GFAFVE S E A+E
Sbjct: 14 QEDIQEVFADYGTVKRVTVPMDRETGRPRGFAFVEMSADAEEDAAIE 60
>gi|410995212|gb|AFV96677.1| rnp-1 like RNA-binding protein [uncultured Sulfuricurvum sp.
RIFRC-1]
Length = 90
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 33/53 (62%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
+P + + ++ +F +YG+V+ V K TG+ +GF FVE + ++EA KA+
Sbjct: 8 NIPYGKDENDLKDLFGQYGEVSSVKFVNDKETGRFRGFGFVEMANQDEANKAI 60
>gi|254416097|ref|ZP_05029852.1| RNA-binding protein, putative [Coleofasciculus chthonoplastes PCC
7420]
gi|196177030|gb|EDX72039.1| RNA-binding protein, putative [Coleofasciculus chthonoplastes PCC
7420]
Length = 95
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 28/43 (65%)
Query: 29 IESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
+ VF++YG V V LP + TG+L+GF FVE T++E A+
Sbjct: 17 LSEVFAEYGTVKRVHLPTDRETGRLRGFGFVEMGTEDEEASAI 59
>gi|164657762|ref|XP_001730007.1| hypothetical protein MGL_2993 [Malassezia globosa CBS 7966]
gi|159103901|gb|EDP42793.1| hypothetical protein MGL_2993 [Malassezia globosa CBS 7966]
Length = 638
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 26/62 (41%), Positives = 38/62 (61%), Gaps = 6/62 (9%)
Query: 27 DYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE------LGLNPCPT 80
D I + F+++G+VT V LPK +G+ KGF +VEF +++ A KALE LG P
Sbjct: 509 DDIWNAFAEFGEVTGVRLPKEIDSGRPKGFGYVEFVSQDNAAKALETMNGQALGGRPIRI 568
Query: 81 DY 82
D+
Sbjct: 569 DF 570
Score = 35.8 bits (81), Expect = 3.2, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 32/52 (61%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKA 70
+L ++D+++S F +YG V + + +G+ +GF +V+F+T EA +A
Sbjct: 400 QLSWNVDNDWLKSEFEQYGTVLDARVQCDRDSGRSRGFGYVDFATSAEALRA 451
>gi|378731298|gb|EHY57757.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 763
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 29/72 (40%), Positives = 44/72 (61%), Gaps = 4/72 (5%)
Query: 1 MAELVENNKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVE 60
+A+ +++NK ++V+K LP EA I ++F YG++ V LPK K +GFAF E
Sbjct: 630 IAKKLDSNKT--KIVIK-NLPFEATKKDIRALFGAYGQLRTVRLPK-KFDNSARGFAFAE 685
Query: 61 FSTKEEATKALE 72
F T +EA A+E
Sbjct: 686 FVTPKEAENAME 697
>gi|195133350|ref|XP_002011102.1| GI16192 [Drosophila mojavensis]
gi|193907077|gb|EDW05944.1| GI16192 [Drosophila mojavensis]
Length = 919
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 5 VENNKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGK--LKGFAFVEFS 62
V K+ G +L +P +A H + +F +G++T + LPK + G+ +GF FV+++
Sbjct: 779 VAQKKQTGTKILVRNIPFQAHHHEVRDIFKAFGELTSLRLPKKMTPGEDSHRGFCFVDYT 838
Query: 63 TKEEATKALE 72
TK +A +A +
Sbjct: 839 TKADAKRAFD 848
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
R+++K+ LP + D + ++F G +T + L K+ GK + F FV +S++ EA A++
Sbjct: 3 RIIVKQ-LPKQISEDKLRNIFGTKGTITDLQL-KYTPDGKFRQFCFVGYSSEAEAQAAIK 60
Query: 73 LGLNPC 78
N C
Sbjct: 61 HFNNTC 66
>gi|340725363|ref|XP_003401040.1| PREDICTED: poly(U)-binding-splicing factor half pint-like [Bombus
terrestris]
gi|350403872|ref|XP_003486932.1| PREDICTED: poly(U)-binding-splicing factor half pint-like [Bombus
impatiens]
Length = 592
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 3 ELVENNKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFS 62
E+ E +K Y R+ + + + D I+SVF +G +TY L + S + KG+ F+E+
Sbjct: 209 EITEESKHYNRIYIAS-IHQDLTEDDIKSVFEAFGPITYCKLAQGSSPHRHKGYGFIEYE 267
Query: 63 TKEEATKAL 71
T + A +A+
Sbjct: 268 TMQAALEAI 276
Score = 35.8 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 26/50 (52%)
Query: 23 EAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
E + D I F +G + +++ T K KGFAFVE+ E A ALE
Sbjct: 130 ELKEDTIRQAFLPFGPIKSINMSWDPVTQKHKGFAFVEYEIPEAAQLALE 179
>gi|307177474|gb|EFN66601.1| Poly(U)-binding-splicing factor half pint [Camponotus floridanus]
Length = 510
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 3 ELVENNKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFS 62
E+ E +K Y R+ + + + D I+SVF +G +TY L + S + KG+ F+E+
Sbjct: 127 EITEESKHYNRIYIAS-IHQDLTEDDIKSVFEAFGPITYCKLAQGSSPHRHKGYGFIEYE 185
Query: 63 TKEEATKAL 71
T + A +A+
Sbjct: 186 TMQAALEAI 194
Score = 35.8 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 26/50 (52%)
Query: 23 EAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
E + D I F +G + +++ T K KGFAFVE+ E A ALE
Sbjct: 48 ELKEDTIRQAFLPFGPIKSINMSWDPVTQKHKGFAFVEYEIPEAAQLALE 97
>gi|448878413|gb|AGE46169.1| arginine/serine-rich splicing factor SC39 transcript III
[Physcomitrella patens subsp. patens]
Length = 104
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%)
Query: 27 DYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
D + +F +YGKV + +P+ + TG+ +GFAFV + +EA KA+E
Sbjct: 30 DDLYPLFDRYGKVVDIFIPRDRRTGESRGFAFVRYKYSDEAQKAIE 75
>gi|17230420|ref|NP_486968.1| RNA-binding protein [Nostoc sp. PCC 7120]
gi|75907197|ref|YP_321493.1| RNA-binding region RNP-1 [Anabaena variabilis ATCC 29413]
gi|81818505|sp|Q44554.3|RBPB_NOSS1 RecName: Full=Putative RNA-binding protein RbpB
gi|304057|gb|AAA67898.1| RNA-binding protein [Nostoc sp. PCC 7120]
gi|801736|dbj|BAA09050.1| RNA-binding protein RbpB [Anabaena variabilis]
gi|17132022|dbj|BAB74627.1| RNA-binding protein [Nostoc sp. PCC 7120]
gi|75700922|gb|ABA20598.1| RNA-binding region RNP-1 [Anabaena variabilis ATCC 29413]
Length = 103
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%)
Query: 29 IESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+ +VF++YG V V LP + TG+++GF FVE + E T A+E
Sbjct: 17 LNAVFAEYGSVKRVQLPVDRETGRVRGFGFVEMGSDAEETAAIE 60
>gi|440797101|gb|ELR18196.1| La domain containing protein [Acanthamoeba castellanii str. Neff]
Length = 322
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 15 VLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKE 65
V E LP +HD + +F ++G V YVSLP+ KGFAF+EF+ +
Sbjct: 96 VYAEHLPEGYDHDVVRGMFEQHGAVNYVSLPR-NPDKSFKGFAFIEFAQHD 145
>gi|50546647|ref|XP_500793.1| YALI0B12276p [Yarrowia lipolytica]
gi|74689812|sp|Q6CEW9.1|MRD1_YARLI RecName: Full=Multiple RNA-binding domain-containing protein 1
gi|49646659|emb|CAG83044.1| YALI0B12276p [Yarrowia lipolytica CLIB122]
Length = 828
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 9 KKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAT 68
+K GR+ L+ L E D+ +FS+YG++ V LP TG+ KGFA V+F E A
Sbjct: 298 RKTGRLFLRNLLYTAKEEDF-RQLFSQYGELEEVHLPINTKTGQCKGFAHVQFEDPENAI 356
Query: 69 KALE 72
A E
Sbjct: 357 AAYE 360
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 3 ELVENNKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFS 62
E E K +L + LP EA ++ +F +G + V +PK K + +GFAF E+
Sbjct: 693 ETTETKKAIDSKILIKNLPFEATKKDVQKLFGAFGSLKTVRVPK-KFNSESRGFAFAEYV 751
Query: 63 TKEEATKAL 71
+ +EA A+
Sbjct: 752 SAKEAEHAM 760
>gi|126654754|ref|ZP_01726288.1| RNA-binding region RNP-1 [Cyanothece sp. CCY0110]
gi|126623489|gb|EAZ94193.1| RNA-binding region RNP-1 [Cyanothece sp. CCY0110]
Length = 97
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 30/43 (69%)
Query: 29 IESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
+ VF+ YG+V V +P + TG+++GFAFVE ++ ++ KA+
Sbjct: 17 LSEVFTDYGQVKRVHIPTDRDTGRMRGFAFVEMTSDDQEEKAI 59
>gi|383861059|ref|XP_003706004.1| PREDICTED: poly(U)-binding-splicing factor half pint-like
[Megachile rotundata]
Length = 592
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 3 ELVENNKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFS 62
E+ E +K Y R+ + + + D I+SVF +G +TY L + S + KG+ F+E+
Sbjct: 209 EITEESKHYNRIYIAS-IHQDLTEDDIKSVFEAFGPITYCKLAQGSSPHRHKGYGFIEYE 267
Query: 63 TKEEATKAL 71
T + A +A+
Sbjct: 268 TMQAALEAI 276
Score = 35.8 bits (81), Expect = 3.8, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 26/50 (52%)
Query: 23 EAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
E + D I F +G + +++ T K KGFAFVE+ E A ALE
Sbjct: 130 ELKEDTIRQAFLPFGPIKSINMSWDPVTQKHKGFAFVEYEIPEAAQLALE 179
>gi|254424963|ref|ZP_05038681.1| RNA-binding protein, putative [Synechococcus sp. PCC 7335]
gi|196192452|gb|EDX87416.1| RNA-binding protein, putative [Synechococcus sp. PCC 7335]
Length = 92
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 36/52 (69%), Gaps = 3/52 (5%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEF---STKEEATKALE 72
A+ + +E VF +YG V ++LP + TG+ +GFAFVE +T+E+A +AL+
Sbjct: 12 AKEEDLEGVFGEYGTVKRITLPTDRETGRPRGFAFVEMEEDATEEKAIEALD 63
>gi|171690620|ref|XP_001910235.1| hypothetical protein [Podospora anserina S mat+]
gi|170945258|emb|CAP71369.1| unnamed protein product [Podospora anserina S mat+]
Length = 303
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
AE + + +F ++G+VT V L K + TG KGFAF+ F+ + +A KA
Sbjct: 234 AEENELRDMFERFGRVTRVFLAKDRDTGLAKGFAFISFADRGDAVKAC 281
>gi|449297589|gb|EMC93607.1| hypothetical protein BAUCODRAFT_76311, partial [Baudoinia
compniacensis UAMH 10762]
Length = 253
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 23 EAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+A D + VFS+YG + V LP + TG LKGF +VE + ++A A E
Sbjct: 118 DANEDMVTEVFSEYGSIKAVRLPTDRDTGALKGFGYVEMFSIDDAKVAFE 167
Score = 34.7 bits (78), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 29/48 (60%)
Query: 25 EHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+ +++ F ++G++ + + TGK KGF FVEF + + A KA+E
Sbjct: 13 DEEWLMREFEEFGELASTRIMTDRETGKSKGFGFVEFKSVDGAIKAVE 60
>gi|328783360|ref|XP_001121000.2| PREDICTED: poly(U)-binding-splicing factor half pint-like [Apis
mellifera]
Length = 592
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 3 ELVENNKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFS 62
E+ E +K Y R+ + + + D I+SVF +G +TY L + S + KG+ F+E+
Sbjct: 209 EITEESKHYNRIYIAS-IHQDLTEDDIKSVFEAFGPITYCKLAQGSSPHRHKGYGFIEYE 267
Query: 63 TKEEATKAL 71
T + A +A+
Sbjct: 268 TMQAALEAI 276
Score = 35.8 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 26/50 (52%)
Query: 23 EAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
E + D I F +G + +++ T K KGFAFVE+ E A ALE
Sbjct: 130 ELKEDTIRQAFLPFGPIKSINMSWDPVTQKHKGFAFVEYEIPEAAQLALE 179
>gi|172035929|ref|YP_001802430.1| RNA-binding protein [Cyanothece sp. ATCC 51142]
gi|354556024|ref|ZP_08975322.1| RNP-1 like RNA-binding protein [Cyanothece sp. ATCC 51472]
gi|171697383|gb|ACB50364.1| RNA-binding protein [Cyanothece sp. ATCC 51142]
gi|353552023|gb|EHC21421.1| RNP-1 like RNA-binding protein [Cyanothece sp. ATCC 51472]
Length = 98
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 28/41 (68%)
Query: 32 VFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
VFS+YG V VSLP + TG+ +GF FVE + ++ T A+E
Sbjct: 20 VFSEYGTVKRVSLPTDRETGRPRGFGFVEMESDDQETAAIE 60
>gi|380016392|ref|XP_003692169.1| PREDICTED: poly(U)-binding-splicing factor half pint-like [Apis
florea]
Length = 592
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 3 ELVENNKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFS 62
E+ E +K Y R+ + + + D I+SVF +G +TY L + S + KG+ F+E+
Sbjct: 209 EITEESKHYNRIYIAS-IHQDLTEDDIKSVFEAFGPITYCKLAQGSSPHRHKGYGFIEYE 267
Query: 63 TKEEATKAL 71
T + A +A+
Sbjct: 268 TMQAALEAI 276
Score = 35.8 bits (81), Expect = 3.8, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 26/50 (52%)
Query: 23 EAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
E + D I F +G + +++ T K KGFAFVE+ E A ALE
Sbjct: 130 ELKEDTIRQAFLPFGPIKSINMSWDPVTQKHKGFAFVEYEIPEAAQLALE 179
>gi|318042980|ref|ZP_07974936.1| RNA recognition motif-containing protein [Synechococcus sp.
CB0101]
Length = 176
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 35/54 (64%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
LP AE + + +F+ +G+VT LP + TG+ +GFAFVE + ++ ++A++
Sbjct: 7 NLPFRAEQEDVAELFAPFGEVTNCFLPLERDTGRKRGFAFVELADEDSESRAID 60
>gi|198424821|ref|XP_002130575.1| PREDICTED: similar to RNA binding motif protein 28 [Ciona
intestinalis]
Length = 819
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 36/61 (59%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
G+ V L E+E ++ V K+G + Y + K+TG KG AFV+F+TKEEA K +
Sbjct: 405 GKTVFIRNLSYESEEAELKIVMEKFGDINYCKIVINKATGLPKGSAFVQFATKEEAEKCI 464
Query: 72 E 72
E
Sbjct: 465 E 465
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Query: 26 HDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
D ++S F ++GK+T V +P K GK +GFAFV+FS EA KA+
Sbjct: 233 EDELKSEFKRFGKITEVKIP-VKPDGKKRGFAFVQFSHVLEAGKAI 277
>gi|224082127|ref|XP_002306575.1| predicted protein [Populus trichocarpa]
gi|222856024|gb|EEE93571.1| predicted protein [Populus trichocarpa]
Length = 101
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 31/46 (67%)
Query: 27 DYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
D + +F KYGKV V +P+ + TG+ +GFAFV + EEA KA++
Sbjct: 30 DDLFPLFDKYGKVVDVFIPRDRRTGESRGFAFVRYKYAEEAQKAVD 75
>gi|156843476|ref|XP_001644805.1| hypothetical protein Kpol_1041p4 [Vanderwaltozyma polyspora DSM
70294]
gi|156115456|gb|EDO16947.1| hypothetical protein Kpol_1041p4 [Vanderwaltozyma polyspora DSM
70294]
Length = 384
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 43/85 (50%), Gaps = 17/85 (20%)
Query: 4 LVENNKKY-GR-----VVLKEKLPP-----------EAEHDYIESVFSKYGKVTYVSLPK 46
LV+N+K Y GR ++ K PP + D + F G++ + +
Sbjct: 196 LVKNSKDYEGRPDKNDLISMSKNPPSRILFVGNLSFDTTDDLLRKHFQHCGEIIKIRMAT 255
Query: 47 FKSTGKLKGFAFVEFSTKEEATKAL 71
F+ TGK KGFAFV+F +E ATKAL
Sbjct: 256 FQDTGKCKGFAFVDFKNEEGATKAL 280
>gi|322785180|gb|EFZ11893.1| hypothetical protein SINV_08068 [Solenopsis invicta]
Length = 545
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 3 ELVENNKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFS 62
E+ E +K Y R+ + + + D I+SVF +G +TY L + S + KG+ F+E+
Sbjct: 162 EITEESKHYNRIYIAS-IHQDLTEDDIKSVFEAFGPITYCKLAQGSSPHRHKGYGFIEYE 220
Query: 63 TKEEATKAL 71
T + A +A+
Sbjct: 221 TMQAALEAI 229
Score = 35.8 bits (81), Expect = 3.8, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 26/50 (52%)
Query: 23 EAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
E + D I F +G + +++ T K KGFAFVE+ E A ALE
Sbjct: 83 ELKEDTIRQAFLPFGPIKSINMSWDPVTQKHKGFAFVEYEIPEAAQLALE 132
>gi|115476996|ref|NP_001062094.1| Os08g0486200 [Oryza sativa Japonica Group]
gi|42408182|dbj|BAD09319.1| putative splicing factor, arginine/serine-rich [Oryza sativa
Japonica Group]
gi|113624063|dbj|BAF24008.1| Os08g0486200 [Oryza sativa Japonica Group]
gi|215693774|dbj|BAG88973.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737273|dbj|BAG96202.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 289
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 30/46 (65%)
Query: 27 DYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
D + +F +YGKV V +P+ + TG +GFAFV + EEA KA++
Sbjct: 30 DDLFPLFDRYGKVVDVFIPRDRRTGDSRGFAFVRYKYAEEAQKAID 75
>gi|380495456|emb|CCF32382.1| RNA recognition domain-containing protein [Colletotrichum
higginsianum]
Length = 927
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 6/78 (7%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEA-TKA 70
GR + L P A D ++ FSKYG V +S+P+ K+ GK G A+VE T+E+A T A
Sbjct: 571 GRELHITNLDPSAVEDDVQKAFSKYGTVKRISIPRNKA-GKGHGAAYVEMETREQARTAA 629
Query: 71 LELGLNPCPTDYQSSILT 88
EL +SSI+T
Sbjct: 630 SELD----KAKLRSSIMT 643
>gi|434406111|ref|YP_007148996.1| RRM domain-containing RNA-binding protein [Cylindrospermum
stagnale PCC 7417]
gi|428260366|gb|AFZ26316.1| RRM domain-containing RNA-binding protein [Cylindrospermum
stagnale PCC 7417]
Length = 94
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
L +A ++SVF+ YG+V V LP + TG+L+GFAFV+ + KA+
Sbjct: 8 LSYQATEADLKSVFADYGEVKRVVLPTDRETGRLRGFAFVDMMEDSQEDKAI 59
>gi|16332012|ref|NP_442740.1| RNA binding protein [Synechocystis sp. PCC 6803]
gi|383323755|ref|YP_005384609.1| RNA binding protein [Synechocystis sp. PCC 6803 substr. GT-I]
gi|383326924|ref|YP_005387778.1| RNA binding protein [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|383492808|ref|YP_005410485.1| RNA binding protein [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|384438076|ref|YP_005652801.1| RNA binding protein [Synechocystis sp. PCC 6803]
gi|451816164|ref|YP_007452616.1| RNA binding protein [Synechocystis sp. PCC 6803]
gi|15214210|sp|Q57014.3|RBPA_SYNY3 RecName: Full=Putative RNA-binding protein RbpA
gi|1001324|dbj|BAA10811.1| RNA binding protein [Synechocystis sp. PCC 6803]
gi|1161274|gb|AAA85379.1| RNA binding protein [Synechocystis sp. PCC 6803]
gi|339275109|dbj|BAK51596.1| RNA binding protein [Synechocystis sp. PCC 6803]
gi|359273075|dbj|BAL30594.1| RNA binding protein [Synechocystis sp. PCC 6803 substr. GT-I]
gi|359276245|dbj|BAL33763.1| RNA binding protein [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|359279415|dbj|BAL36932.1| RNA binding protein [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|407960353|dbj|BAM53593.1| RNA binding protein [Synechocystis sp. PCC 6803]
gi|451782133|gb|AGF53102.1| RNA binding protein [Synechocystis sp. PCC 6803]
Length = 101
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 28/44 (63%)
Query: 29 IESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+ +VF++YG V V LP + TG+++GF FVE E T A+E
Sbjct: 17 LTAVFAEYGSVKRVQLPTDRETGRMRGFGFVELEADAEETAAIE 60
>gi|315046452|ref|XP_003172601.1| hypothetical protein MGYG_05193 [Arthroderma gypseum CBS 118893]
gi|311342987|gb|EFR02190.1| hypothetical protein MGYG_05193 [Arthroderma gypseum CBS 118893]
Length = 481
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 32/49 (65%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
A+ ++ +FSKYG + + LP +G+ KGF +V+FS+ +EA A+E
Sbjct: 355 ADESMVQELFSKYGSIQGIRLPTDPESGRPKGFGYVQFSSVDEARAAME 403
>gi|302765723|ref|XP_002966282.1| hypothetical protein SELMODRAFT_7952 [Selaginella moellendorffii]
gi|302793049|ref|XP_002978290.1| hypothetical protein SELMODRAFT_7949 [Selaginella moellendorffii]
gi|300154311|gb|EFJ20947.1| hypothetical protein SELMODRAFT_7949 [Selaginella moellendorffii]
gi|300165702|gb|EFJ32309.1| hypothetical protein SELMODRAFT_7952 [Selaginella moellendorffii]
Length = 92
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 28/41 (68%)
Query: 32 VFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+F +YGKV + +P+ + TG +GFAFV + +EA KA+E
Sbjct: 27 LFDRYGKVVDIFIPRDRRTGDSRGFAFVRYKHADEAQKAIE 67
>gi|346323732|gb|EGX93330.1| eukaryotic translation initiation factor 3, subunit 4 [Cordyceps
militaris CM01]
Length = 296
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 31/47 (65%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKA 70
AE + + +F ++G+VT V L K + TG KGFAF+ F+ + +A KA
Sbjct: 227 AEENELRDMFERFGRVTRVFLAKDRETGMAKGFAFISFADRGDAVKA 273
>gi|365985359|ref|XP_003669512.1| hypothetical protein NDAI_0C06100 [Naumovozyma dairenensis CBS 421]
gi|343768280|emb|CCD24269.1| hypothetical protein NDAI_0C06100 [Naumovozyma dairenensis CBS 421]
Length = 585
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 2 AELVENNKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEF 61
++L E+ + + +K + ++ E +FSKYGKV +L K + GKLKGF FV+F
Sbjct: 211 SQLEESKANFTNIYVKNINLETTDEEFTE-LFSKYGKVLSAALEKTED-GKLKGFGFVDF 268
Query: 62 STKEEATKALE 72
E+A KA+E
Sbjct: 269 ENHEDAAKAVE 279
Score = 39.3 bits (90), Expect = 0.35, Method: Composition-based stats.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 2 AELVENNKKY-GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVE 60
A +E KY G + + L + + ++ F+ YG +T V + + ++ GK +GF FV
Sbjct: 312 ASRLEKMAKYQGVNLFIKNLDDSIDDEKLKEEFAPYGNITSVRVMRTEN-GKSRGFGFVC 370
Query: 61 FSTKEEATKAL 71
FST EEATKA+
Sbjct: 371 FSTPEEATKAI 381
>gi|336471387|gb|EGO59548.1| hypothetical protein NEUTE1DRAFT_116556 [Neurospora tetrasperma
FGSC 2508]
gi|350292485|gb|EGZ73680.1| translation initiation factor 3, RNA-binding subunit [Neurospora
tetrasperma FGSC 2509]
Length = 297
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 30/48 (62%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
AE + +F ++G+VT V L K + TG KGFAF+ F+ + +A KA
Sbjct: 228 AEEQELRDMFERFGRVTRVFLAKDRDTGLAKGFAFISFADRSDAVKAC 275
>gi|352096734|ref|ZP_08957490.1| RNP-1 like RNA-binding protein [Synechococcus sp. WH 8016]
gi|351675956|gb|EHA59114.1| RNP-1 like RNA-binding protein [Synechococcus sp. WH 8016]
Length = 176
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 29/44 (65%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFS 62
LP AE + I +FS YG+VT +LP + TG+ +GFAFVE S
Sbjct: 7 NLPFRAEQEDIIELFSTYGEVTNCALPLERDTGRKRGFAFVEMS 50
>gi|338722679|ref|XP_001915947.2| PREDICTED: LOW QUALITY PROTEIN: poly(A) binding protein,
cytoplasmic 4-like [Equus caballus]
Length = 397
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 28/71 (39%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 2 AELVENNKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEF 61
AEL ++ + +K + + +E VFSKYGK V + STGK KGF FV F
Sbjct: 180 AELQNKANEFTNIYIK-NFGDDMDDKRLEEVFSKYGKTVSVKVMT-DSTGKSKGFGFVSF 237
Query: 62 STKEEATKALE 72
+ E A KA+E
Sbjct: 238 YSHEAAQKAVE 248
Score = 35.0 bits (79), Expect = 5.6, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Query: 33 FSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
FS +G ++ V + K G+ KGF + FS+ EEAT+A+
Sbjct: 313 FSSFGSISRVKV--MKEEGRSKGFGLICFSSPEEATRAM 349
>gi|291391164|ref|XP_002712117.1| PREDICTED: RNA binding motif protein 28 isoform 2 [Oryctolagus
cuniculus]
Length = 755
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 45/67 (67%), Gaps = 3/67 (4%)
Query: 10 KYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATK 69
K R++++ L + D ++++F+++G V V++PK K GK++GFAFV+F EA K
Sbjct: 112 KKARLIIRN-LSFKCSEDDLKTIFAQFGAVLEVNVPK-KPDGKMRGFAFVQFKNLLEAGK 169
Query: 70 ALELGLN 76
AL+ G+N
Sbjct: 170 ALK-GMN 175
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 30/54 (55%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+LPP A + +E +FS+ G V + K + +GF +V FS E+ +AL+
Sbjct: 10 RLPPSARSEQLEELFSQVGPVKQCFVVTEKGSKSCRGFGYVTFSMPEDVQRALK 63
>gi|291391162|ref|XP_002712116.1| PREDICTED: RNA binding motif protein 28 isoform 1 [Oryctolagus
cuniculus]
Length = 767
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 45/67 (67%), Gaps = 3/67 (4%)
Query: 10 KYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATK 69
K R++++ L + D ++++F+++G V V++PK K GK++GFAFV+F EA K
Sbjct: 112 KKARLIIRN-LSFKCSEDDLKTIFAQFGAVLEVNVPK-KPDGKMRGFAFVQFKNLLEAGK 169
Query: 70 ALELGLN 76
AL+ G+N
Sbjct: 170 ALK-GMN 175
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 30/54 (55%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+LPP A + +E +FS+ G V + K + +GF +V FS E+ +AL+
Sbjct: 10 RLPPSARSEQLEELFSQVGPVKQCFVVTEKGSKSCRGFGYVTFSMPEDVQRALK 63
>gi|336265836|ref|XP_003347688.1| hypothetical protein SMAC_03786 [Sordaria macrospora k-hell]
gi|380091222|emb|CCC11079.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 297
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 30/48 (62%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
AE + +F ++G+VT V L K + TG KGFAF+ F+ + +A KA
Sbjct: 228 AEEQELRDMFERFGRVTRVFLAKDRDTGLAKGFAFISFADRSDAVKAC 275
>gi|218201347|gb|EEC83774.1| hypothetical protein OsI_29668 [Oryza sativa Indica Group]
gi|222640763|gb|EEE68895.1| hypothetical protein OsJ_27729 [Oryza sativa Japonica Group]
Length = 298
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 30/46 (65%)
Query: 27 DYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
D + +F +YGKV V +P+ + TG +GFAFV + EEA KA++
Sbjct: 30 DDLFPLFDRYGKVVDVFIPRDRRTGDSRGFAFVRYKYAEEAQKAID 75
>gi|113955034|ref|YP_729253.1| RNA recognition motif-containing protein [Synechococcus sp.
CC9311]
gi|113882385|gb|ABI47343.1| RNA-binding region RNP-1 (RNA recognition motif) [Synechococcus
sp. CC9311]
Length = 181
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 29/44 (65%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFS 62
LP AE + I +FS YG+VT +LP + TG+ +GFAFVE S
Sbjct: 7 NLPFRAEQEDIIELFSTYGEVTNCALPLERDTGRKRGFAFVEMS 50
>gi|427719776|ref|YP_007067770.1| RNP-1 like RNA-binding protein [Calothrix sp. PCC 7507]
gi|427352212|gb|AFY34936.1| RNP-1 like RNA-binding protein [Calothrix sp. PCC 7507]
Length = 101
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFST 63
L E D + +VF++YG V V LP + TG+L+GFAFVE +
Sbjct: 8 LSYEVTQDALSAVFAEYGSVKRVQLPTDRETGRLRGFAFVEMGS 51
>gi|4929888|pdb|1B7F|A Chain A, Sxl-Lethal ProteinRNA COMPLEX
gi|4929889|pdb|1B7F|B Chain B, Sxl-Lethal ProteinRNA COMPLEX
Length = 168
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLNPC 78
LP D ++++F KYG + ++ + K TG+ +G AFV ++ +EEA +A+ N
Sbjct: 96 NLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISALNNVI 155
Query: 79 P 79
P
Sbjct: 156 P 156
>gi|367045462|ref|XP_003653111.1| hypothetical protein THITE_2063817 [Thielavia terrestris NRRL 8126]
gi|347000373|gb|AEO66775.1| hypothetical protein THITE_2063817 [Thielavia terrestris NRRL 8126]
Length = 299
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 30/48 (62%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
AE + +F ++G+VT V L K + TG KGFAF+ F+ + +A KA
Sbjct: 230 AEEQELRDMFERFGRVTRVFLAKDRDTGLAKGFAFISFADRNDAIKAC 277
>gi|75906252|ref|YP_320548.1| RNA-binding region RNP-1 [Anabaena variabilis ATCC 29413]
gi|75699977|gb|ABA19653.1| RNA-binding region RNP-1 [Anabaena variabilis ATCC 29413]
Length = 99
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%), Gaps = 3/50 (6%)
Query: 26 HDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEF---STKEEATKALE 72
D + VFS+YG VT V LP + TG+++GF FVE + ++ A +AL+
Sbjct: 14 QDDLTKVFSEYGSVTRVQLPTDRETGRVRGFGFVEMESSAAEDAAIQALD 63
>gi|400592898|gb|EJP60937.1| RNA recognition domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 1057
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 22/43 (51%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Query: 29 IESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
I +FSK+G VT V++P+ S GK +GF F++F TKE+A KA+
Sbjct: 773 IRDIFSKFGNVTRVNIPRGLS-GKHRGFCFLDFETKEQAEKAV 814
>gi|425448844|ref|ZP_18828688.1| putative RNA-binding protein rbpE [Microcystis aeruginosa PCC
7941]
gi|389767705|emb|CCI06977.1| putative RNA-binding protein rbpE [Microcystis aeruginosa PCC
7941]
Length = 97
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 30/53 (56%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
L + D + VF +YG V V +P K TG+ +GFAFVE K + T A+E
Sbjct: 8 LSYDISQDDLVEVFKEYGNVQRVHIPVDKETGRKRGFAFVEMENKAQETTAIE 60
>gi|260435624|ref|ZP_05789594.1| RNA-binding region RNP-1 [Synechococcus sp. WH 8109]
gi|260413498|gb|EEX06794.1| RNA-binding region RNP-1 [Synechococcus sp. WH 8109]
Length = 190
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 37/57 (64%), Gaps = 3/57 (5%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEF---STKEEATKALE 72
LP AE + + +F+++G+VT +LP + TG+ +GFAF+E ST+E A + L+
Sbjct: 7 NLPFRAEQEDVIELFAQFGEVTNCALPLERDTGRKRGFAFIEMADESTEEAAIEGLQ 63
>gi|121715368|ref|XP_001275293.1| eukaryotic translation initiation factor 3 subunit EifCg, putative
[Aspergillus clavatus NRRL 1]
gi|224488020|sp|A1C646.1|EIF3G_ASPCL RecName: Full=Eukaryotic translation initiation factor 3 subunit G;
Short=eIF3g; AltName: Full=Eukaryotic translation
initiation factor 3 RNA-binding subunit; Short=eIF-3
RNA-binding subunit; AltName: Full=Translation
initiation factor eIF3 p33 subunit homolog; Short=eIF3
p33 homolog
gi|119403450|gb|EAW13867.1| eukaryotic translation initiation factor 3 subunit EifCg, putative
[Aspergillus clavatus NRRL 1]
Length = 290
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
AE I +F ++G+VT V L + + T + KGFAF+ F+ + +A +A E
Sbjct: 221 AEESEIRDLFERFGRVTRVFLARDRETQRAKGFAFISFADRSDAARACE 269
>gi|67920522|ref|ZP_00514042.1| RNA-binding region RNP-1 (RNA recognition motif) [Crocosphaera
watsonii WH 8501]
gi|416377747|ref|ZP_11683649.1| RNA-binding protein [Crocosphaera watsonii WH 0003]
gi|67858006|gb|EAM53245.1| RNA-binding region RNP-1 (RNA recognition motif) [Crocosphaera
watsonii WH 8501]
gi|357266170|gb|EHJ14837.1| RNA-binding protein [Crocosphaera watsonii WH 0003]
Length = 94
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 25/41 (60%)
Query: 32 VFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
VF YG V VSLP + TGK +GF FVE +E T A+E
Sbjct: 20 VFGDYGTVKRVSLPTDRETGKPRGFGFVEMDNDDEETAAIE 60
>gi|434395383|ref|YP_007130330.1| RNP-1 like RNA-binding protein [Gloeocapsa sp. PCC 7428]
gi|428267224|gb|AFZ33170.1| RNP-1 like RNA-binding protein [Gloeocapsa sp. PCC 7428]
Length = 101
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 32/54 (59%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
L E + + +VF++YG V V LP + TG+++GF FVE T+ E A++
Sbjct: 7 NLSYEVTQEDLSAVFAEYGSVKRVQLPTDRETGRVRGFGFVEMDTEAEEDLAID 60
>gi|169616726|ref|XP_001801778.1| hypothetical protein SNOG_11538 [Phaeosphaeria nodorum SN15]
gi|111060126|gb|EAT81246.1| hypothetical protein SNOG_11538 [Phaeosphaeria nodorum SN15]
Length = 830
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 5 VENNKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTK 64
VE ++ GR+ L+ L E D + F+KYG + V +P KS GK KGFAF++F
Sbjct: 302 VEKIRETGRLYLR-NLHFEVTEDELRQHFAKYGSLEEVHVPLKKSDGKGKGFAFIQFKEP 360
Query: 65 EEATKALE 72
E+A A +
Sbjct: 361 EQAVVAYD 368
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 15 VLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
++ + LP EA + ++F+ YG++ V +PK K +GF F EF+TK +A A+
Sbjct: 709 IIIKNLPFEAGKKDVRALFTPYGQLRSVRVPK-KFDASSRGFGFAEFTTKRDAVNAM 764
>gi|307195017|gb|EFN77085.1| Poly(U)-binding-splicing factor half pint [Harpegnathos saltator]
Length = 561
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 3 ELVENNKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFS 62
E+ E +K Y R+ + E D I+SVF +G +TY L + S + KG+ F+E+
Sbjct: 179 EITEESKHYNRIYIASIHQDLTEED-IKSVFEAFGPITYCKLAQGSSPHRHKGYGFIEYE 237
Query: 63 TKEEATKAL 71
T + A +A+
Sbjct: 238 TMQAALEAI 246
Score = 35.8 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 26/50 (52%)
Query: 23 EAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
E + D I F +G + +++ T K KGFAFVE+ E A ALE
Sbjct: 100 ELKEDTIRQAFLPFGPIKSINMSWDPVTQKHKGFAFVEYEIPEAAQLALE 149
>gi|297741610|emb|CBI32742.3| unnamed protein product [Vitis vinifera]
Length = 127
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 33/52 (63%)
Query: 21 PPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
PP + +E++FS+ GKVT + + TG+ +GF FV +++ EE +A+E
Sbjct: 51 PPARRENTLETLFSEQGKVTEARVIYDRETGRSRGFGFVTYNSAEEVNRAIE 102
>gi|255716874|ref|XP_002554718.1| KLTH0F11968p [Lachancea thermotolerans]
gi|238936101|emb|CAR24281.1| KLTH0F11968p [Lachancea thermotolerans CBS 6340]
Length = 879
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 27/64 (42%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 9 KKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAT 68
K G++V+K LP EAE + +FS +G++ V +PK K +GFAFVEF +EA
Sbjct: 748 KSSGKIVVK-NLPFEAERKQVFELFSSFGQLKSVRVPK-KFDKSTRGFAFVEFLLPKEAE 805
Query: 69 KALE 72
A+E
Sbjct: 806 NAME 809
Score = 35.0 bits (79), Expect = 5.7, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 3 ELVENNKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFS 62
+ ++ + GR+ L+ L E D+ + + + +G++ V + TGK KGFA+V F
Sbjct: 326 KFIQKIRTTGRLFLRNILYTATEEDF-KGLLAPFGELEEVHVALDTRTGKSKGFAYVMFR 384
Query: 63 TKEEATKA 70
E+A A
Sbjct: 385 NPEDAVNA 392
>gi|224067534|ref|XP_002302501.1| predicted protein [Populus trichocarpa]
gi|222844227|gb|EEE81774.1| predicted protein [Populus trichocarpa]
Length = 341
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 36/67 (53%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLNPCP 79
L +A D + +FS+ G+VT V L T K KGFAF+ F+T E+A +A+ NP
Sbjct: 39 LDKDATEDDLRKIFSRVGEVTEVRLMMNPQTKKNKGFAFLRFATVEQAKRAVTELKNPVI 98
Query: 80 TDYQSSI 86
Q +
Sbjct: 99 NGKQCGV 105
>gi|158340503|ref|YP_001521497.1| RNA-binding protein [Acaryochloris marina MBIC11017]
gi|158310744|gb|ABW32358.1| RNA-binding protein [Acaryochloris marina MBIC11017]
Length = 81
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+ P + D + +VF++YG V V +P + TG+ +GFAFVE E KA++
Sbjct: 1 MRPLVQQD-LNAVFAEYGTVKQVKMPTDRETGRKRGFAFVEMGNDAEEAKAID 52
>gi|158338654|ref|YP_001519831.1| RNA-binding protein [Acaryochloris marina MBIC11017]
gi|359461822|ref|ZP_09250385.1| RNA-binding protein [Acaryochloris sp. CCMEE 5410]
gi|158308895|gb|ABW30512.1| RNA-binding protein [Acaryochloris marina MBIC11017]
Length = 86
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 23 EAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
EA D + +VF++YGKV V LP + TG+ +GF FV+ E A+
Sbjct: 11 EASQDDVTAVFAEYGKVVKVHLPVDRETGRKRGFGFVDMENDSEEEAAI 59
>gi|164423677|ref|XP_962716.2| hypothetical protein NCU08046 [Neurospora crassa OR74A]
gi|224488070|sp|Q6MFP4.2|EIF3G_NEUCR RecName: Full=Eukaryotic translation initiation factor 3 subunit G;
Short=eIF3g; AltName: Full=Eukaryotic translation
initiation factor 3 RNA-binding subunit; Short=eIF-3
RNA-binding subunit; AltName: Full=Translation
initiation factor eIF3 p33 subunit homolog; Short=eIF3
p33 homolog
gi|157070192|gb|EAA33480.2| hypothetical protein NCU08046 [Neurospora crassa OR74A]
Length = 297
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 30/48 (62%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
AE + +F ++G+VT V L K + TG KGFAF+ F+ + +A KA
Sbjct: 228 AEEQELRDMFERFGRVTRVFLAKDRDTGLAKGFAFISFADRSDAVKAC 275
>gi|388505176|gb|AFK40654.1| unknown [Medicago truncatula]
Length = 267
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 30/41 (73%)
Query: 32 VFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+F KYGKV + +P+ + TG+ +GFAFV + +EA+KA++
Sbjct: 35 LFDKYGKVVDIFIPRDRRTGESRGFAFVRYKYADEASKAVD 75
>gi|116790938|gb|ABK25797.1| unknown [Picea sitchensis]
Length = 300
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 28/41 (68%)
Query: 32 VFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+F +YGKV + +P+ K TG +GFAFV + +EA KA++
Sbjct: 35 LFDRYGKVVDIFIPRDKRTGDSRGFAFVRYKYADEAQKAID 75
>gi|428224332|ref|YP_007108429.1| RNP-1 like RNA-binding protein [Geitlerinema sp. PCC 7407]
gi|427984233|gb|AFY65377.1| RNP-1 like RNA-binding protein [Geitlerinema sp. PCC 7407]
Length = 90
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 32/54 (59%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
L +A + + SVF++YG V V LP + TG+++GFAFV+ + A+E
Sbjct: 7 NLSYQATEEDVRSVFAEYGTVERVVLPTDRETGRMRGFAFVDLTDDSTEDSAIE 60
>gi|315052346|ref|XP_003175547.1| hypothetical protein MGYG_03072 [Arthroderma gypseum CBS 118893]
gi|311340862|gb|EFR00065.1| hypothetical protein MGYG_03072 [Arthroderma gypseum CBS 118893]
Length = 782
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 23/46 (50%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Query: 31 SVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLN 76
S+F KYG++T +L + TGK +GF FV FS E A+ A+E GLN
Sbjct: 257 SLFEKYGEITSATLSRDNETGKSRGFGFVNFSDHEAASAAVE-GLN 301
>gi|17230269|ref|NP_486817.1| RNA binding protein [Nostoc sp. PCC 7120]
gi|81859084|sp|Q9WX37.3|RBPE_NOSS1 RecName: Full=Putative RNA-binding protein RbpE
gi|4850342|dbj|BAA77711.1| RNA binding protein [Anabaena variabilis]
gi|17131870|dbj|BAB74476.1| RNA binding protein [Nostoc sp. PCC 7120]
Length = 99
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%), Gaps = 3/50 (6%)
Query: 26 HDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEF---STKEEATKALE 72
D + VFS+YG VT V LP + TG+++GF FVE + ++ A +AL+
Sbjct: 14 QDDLTKVFSEYGSVTRVQLPTDRETGRVRGFGFVEMESSAAEDAAIQALD 63
>gi|448878411|gb|AGE46168.1| arginine/serine-rich splicing factor SC39 transcript II
[Physcomitrella patens subsp. patens]
Length = 167
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%)
Query: 27 DYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
D + +F +YGKV + +P+ + TG+ +GFAFV + +EA KA+E
Sbjct: 30 DDLYPLFDRYGKVVDIFIPRDRRTGESRGFAFVRYKYSDEAQKAIE 75
>gi|47228610|emb|CAG07342.1| unnamed protein product [Tetraodon nigroviridis]
Length = 929
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 49/84 (58%), Gaps = 3/84 (3%)
Query: 5 VENNKKYGRVVLKEKLPPEAEHDYIESVFSKYG-KVTYVSLPKFKSTGKLKGFAFVEFST 63
+++N++ +++ LPP A I + + G + V L + KS+G+ +GFAFVEF+
Sbjct: 192 LDHNQRPSNIIMLRMLPPNATATEIRAQLQEQGIQPREVRLMRNKSSGQSRGFAFVEFNV 251
Query: 64 KEEATKALELGLNPCPTDYQSSIL 87
+EAT+ +E N T +++S L
Sbjct: 252 IQEATRWME--TNQSYTQWRNSFL 273
>gi|50344898|ref|NP_001002121.1| poly(U)-binding-splicing factor PUF60-B [Danio rerio]
gi|47940403|gb|AAH71467.1| Poly-U binding splicing factor b [Danio rerio]
Length = 502
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 1 MAELVENNKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVE 60
+ +L E + Y R+ + + P+ D I+SVF +GK+ L + +TGK KGF F+E
Sbjct: 155 IEQLAEEARAYNRIYVAS-IHPDLSDDDIKSVFEAFGKIKSCMLAREPTTGKHKGFGFIE 213
Query: 61 FSTKEEATKAL 71
+ + + A+
Sbjct: 214 YEKPQSSLDAV 224
Score = 35.4 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 25/50 (50%)
Query: 23 EAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
E D I F+ +G + + + T K KGFAFVE+ E A ALE
Sbjct: 79 ELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALE 128
>gi|39979172|emb|CAE85545.1| related to translation initiation factor eIF3 subunit [Neurospora
crassa]
Length = 294
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 30/48 (62%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
AE + +F ++G+VT V L K + TG KGFAF+ F+ + +A KA
Sbjct: 225 AEEQELRDMFERFGRVTRVFLAKDRDTGLAKGFAFISFADRSDAVKAC 272
>gi|393910685|gb|EJD75995.1| hypothetical protein LOAG_16958 [Loa loa]
Length = 159
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 37/61 (60%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
G +V + EA D + FS+YG++ ++L + TG LKG+A VE+ T++EA A+
Sbjct: 70 GWIVFVTNVHEEAHEDDVYERFSEYGEIKNMNLNIDRRTGFLKGYALVEYETQKEALAAI 129
Query: 72 E 72
E
Sbjct: 130 E 130
>gi|346974495|gb|EGY17947.1| polyadenylate-binding protein [Verticillium dahliae VdLs.17]
Length = 759
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 23 EAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
EA D +F+KYG+VT SL + GK +GF FV F+T E A++A+E
Sbjct: 252 EASDDEFRDLFTKYGEVTSSSLAR-DQEGKSRGFGFVNFTTHEAASQAVE 300
>gi|336386207|gb|EGO27353.1| hypothetical protein SERLADRAFT_460616 [Serpula lacrymans var.
lacrymans S7.9]
Length = 123
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 36/62 (58%)
Query: 9 KKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAT 68
KK +VV+ L H +++++F YG++T V LP F +G+ +G A VE++ A
Sbjct: 28 KKDAKVVVVNGLSRNVVHSHLQTIFGFYGEITKVDLPLFLKSGQNRGKAAVEYADSASAN 87
Query: 69 KA 70
KA
Sbjct: 88 KA 89
>gi|160332383|sp|Q6IQE0.2|PU60B_DANRE RecName: Full=Poly(U)-binding-splicing factor PUF60-B
Length = 516
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 1 MAELVENNKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVE 60
+ +L E + Y R+ + + P+ D I+SVF +GK+ L + +TGK KGF F+E
Sbjct: 172 IEQLAEEARAYNRIYVAS-IHPDLSDDDIKSVFEAFGKIKSCMLAREPTTGKHKGFGFIE 230
Query: 61 FSTKEEATKAL 71
+ + + A+
Sbjct: 231 YEKPQSSLDAV 241
Score = 35.4 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 25/50 (50%)
Query: 23 EAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
E D I F+ +G + + + T K KGFAFVE+ E A ALE
Sbjct: 96 ELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALE 145
>gi|296210709|ref|XP_002752086.1| PREDICTED: RNA-binding protein 28 isoform 1 [Callithrix jacchus]
Length = 760
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 37/50 (74%), Gaps = 2/50 (4%)
Query: 27 DYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLN 76
D +++VF+++G V V++P+ K GK++GFAFV+F EA KAL+ G+N
Sbjct: 128 DELKTVFAQFGAVLEVNIPR-KPDGKMRGFAFVQFKNLLEAGKALK-GMN 175
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 29/53 (54%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
+LPP A + +E +FS+ G V + K + +GF +V FS E+ +AL
Sbjct: 10 RLPPSARSEQLEELFSQVGPVKQCFVVTEKGSKTCRGFGYVTFSMLEDVQRAL 62
>gi|449438193|ref|XP_004136874.1| PREDICTED: uncharacterized protein LOC101219227 [Cucumis sativus]
Length = 283
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 30/46 (65%)
Query: 27 DYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
D + +F KYGKV + +P+ + TG +GFAFV + +EA KA+E
Sbjct: 30 DDLYPLFHKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVE 75
>gi|320591142|gb|EFX03581.1| polyadenylate-binding protein [Grosmannia clavigera kw1407]
Length = 780
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 6 ENNKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKE 65
E Y + +K L + D +F +YG VT ++ + + TGK +GF F+ F+T E
Sbjct: 234 EMKANYTNIYIK-NLHADVTDDEFRKLFEQYGAVTSSTIARDQETGKSRGFGFINFTTHE 292
Query: 66 EATKALE 72
A KA+E
Sbjct: 293 SAAKAVE 299
>gi|297738037|emb|CBI27238.3| unnamed protein product [Vitis vinifera]
Length = 767
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
GR+ ++ LP A D +E +FSK+G V+ V L K T + KG A+V F+ E A +AL
Sbjct: 229 GRLFVR-NLPYTATEDELEELFSKFGNVSQVHLVVNKDTKRSKGIAYVLFTLPESAVRAL 287
Query: 72 E 72
E
Sbjct: 288 E 288
Score = 40.8 bits (94), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Query: 5 VENNKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLP-KFKSTGKLKGFAFVEFST 63
V+ +K +++++ + EA + +FS +G++ + LP KF G +GFAFVEF T
Sbjct: 639 VDKDKSSTKLIVR-NVAFEATEKDLRQLFSPFGQIKSLRLPMKF---GSHRGFAFVEFVT 694
Query: 64 KEEATKALE 72
K+EA AL+
Sbjct: 695 KQEAQNALQ 703
>gi|449666027|ref|XP_002162990.2| PREDICTED: probable RNA-binding protein 19-like [Hydra
magnipapillata]
Length = 914
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 43/65 (66%), Gaps = 2/65 (3%)
Query: 6 ENNKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKE 65
E N+ ++V++ +P EA ++ +FS +G + + LPK K TG +GFAF++F+TK+
Sbjct: 786 EKNQVSSKMVVRN-IPFEATVKELQELFSTFGHIKSLRLPK-KITGTHRGFAFIDFTTKQ 843
Query: 66 EATKA 70
+A +A
Sbjct: 844 DAKRA 848
Score = 38.1 bits (87), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
GR+ ++ L D + ++FS++G + ++LP K++ K GFAFV F + A KA+
Sbjct: 408 GRLFVRN-LSYTCTEDSLTNLFSQFGPLVEINLPIDKNSNKTTGFAFVTFMMADHAIKAM 466
>gi|425459045|ref|ZP_18838531.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC
9808]
gi|389823285|emb|CCI28615.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC
9808]
Length = 97
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 30/52 (57%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
L E D + VF YG V V +P + TG+ +GFAFV+ K++ TKA+
Sbjct: 8 LSYEISEDDLTDVFKDYGIVQRVYIPVDRDTGRKRGFAFVQMENKDQETKAI 59
>gi|357113956|ref|XP_003558767.1| PREDICTED: nuclear polyadenylated RNA-binding protein 4-like
[Brachypodium distachyon]
Length = 345
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 32/53 (60%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
LPP A + ++ F++YG+V + + + TG +GFAFVEF+ E ALE
Sbjct: 13 LPPSAHEEELKEHFARYGEVLCARVVRHRDTGYPRGFAFVEFADDEGPRAALE 65
>gi|331216227|ref|XP_003320793.1| hypothetical protein PGTG_02815 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309299783|gb|EFP76374.1| hypothetical protein PGTG_02815 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 193
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 7/85 (8%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
G VV+ + + EA + + FS YG V +++P + TG +KG+A VE+ T++EA A+
Sbjct: 80 GWVVIVQGVHEEATEEDLMEKFSDYGHVMNLAMPLDRRTGYVKGYALVEYETRKEAEMAI 139
Query: 72 ELGLNPCPTDYQSSILTTTSRLSFG 96
+ G + S +L T + F
Sbjct: 140 KSGTD-------SKLLDQTLKCDFA 157
>gi|308272084|emb|CBX28692.1| Glycine-rich RNA-binding protein 8 [uncultured Desulfobacterium
sp.]
Length = 127
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLN 76
L E D + F + GKV VS+ K +G+ KGF FVE S+ EA A+E GLN
Sbjct: 8 LSYEVNEDDLRQAFEQLGKVDSVSIINDKYSGRSKGFGFVEMSSDAEAQAAIE-GLN 63
>gi|225681498|gb|EEH19782.1| eukaryotic translation initiation factor 3 subunit p42/p44
[Paracoccidioides brasiliensis Pb03]
Length = 323
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
AE I +F ++G+VT V L K + T KGFAF+ F + +A +A E
Sbjct: 254 AEEQEIRDMFERFGRVTRVFLAKDRETNMAKGFAFISFQDRSDAARACE 302
>gi|116074289|ref|ZP_01471551.1| RNA-binding region RNP-1 (RNA recognition motif) [Synechococcus
sp. RS9916]
gi|116069594|gb|EAU75346.1| RNA-binding region RNP-1 (RNA recognition motif) [Synechococcus
sp. RS9916]
Length = 191
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 34/54 (62%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
LP AE + I +F+ +G+VT +LP + TG+ +GFAF+E + + T A++
Sbjct: 7 NLPFRAEQEDIIELFAAHGEVTNCALPLERDTGRKRGFAFIEMADEAMETAAID 60
>gi|427416011|ref|ZP_18906194.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
7375]
gi|425758724|gb|EKU99576.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
7375]
Length = 98
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 23 EAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
+A D I VF +YG+V ++LP + TGK +GFAF+ EE A+
Sbjct: 11 QATEDDIRDVFVEYGEVARITLPVDRETGKRRGFAFINMVKDEEEDLAI 59
>gi|367018676|ref|XP_003658623.1| hypothetical protein MYCTH_2294614 [Myceliophthora thermophila ATCC
42464]
gi|347005890|gb|AEO53378.1| hypothetical protein MYCTH_2294614 [Myceliophthora thermophila ATCC
42464]
Length = 831
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 26/59 (44%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
++V+K LP EA + ++FS YGK+ + LPK K +GFAF EF+T +EA AL
Sbjct: 709 KIVIK-NLPFEATKKDVRALFSAYGKLVALRLPK-KFNSMSRGFAFAEFATAKEALNAL 765
>gi|253181|gb|AAB22809.1| NSR1=nucleolin homolog [Saccharomyces cerevisiae, Peptide, 249 aa]
Length = 249
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 32/49 (65%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
A+ D I +F+K+G+V V +P T + KGF +V+FS E+A KAL+
Sbjct: 113 ADRDAIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDAKKALD 161
>gi|74198338|dbj|BAB31653.3| unnamed protein product [Mus musculus]
Length = 243
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 40/60 (66%), Gaps = 2/60 (3%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
R++++ L + D +++VF+ YG V V++PK K GK++GFAFV+F EA KAL+
Sbjct: 115 RLIIRN-LSFKCSEDDLKAVFTHYGTVLEVNIPK-KPDGKMRGFAFVQFKNLLEAGKALK 172
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+LPP A D +E +FS+ G V + K + +GF +V FS E+ +AL+
Sbjct: 10 RLPPSARSDQLEELFSQVGPVKQCFVVTEKGSKACRGFGYVTFSMLEDVQRALK 63
>gi|449478880|ref|XP_004155443.1| PREDICTED: uncharacterized protein LOC101223695 [Cucumis sativus]
Length = 283
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 30/46 (65%)
Query: 27 DYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
D + +F KYGKV + +P+ + TG +GFAFV + +EA KA+E
Sbjct: 30 DDLYPLFHKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVE 75
>gi|4930239|pdb|3SXL|A Chain A, Sex-Lethal Rna Recognition Domains 1 And 2 From Drosophila
Melanogaster
gi|4930240|pdb|3SXL|B Chain B, Sex-Lethal Rna Recognition Domains 1 And 2 From Drosophila
Melanogaster
gi|4930241|pdb|3SXL|C Chain C, Sex-Lethal Rna Recognition Domains 1 And 2 From Drosophila
Melanogaster
Length = 184
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLNPC 78
LP D ++++F KYG + ++ + K TG+ +G AFV ++ +EEA +A+ N
Sbjct: 107 NLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISALNNVI 166
Query: 79 P 79
P
Sbjct: 167 P 167
>gi|403343651|gb|EJY71156.1| RNA-binding proteins (RRM domain) [Oxytricha trifallax]
Length = 491
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Query: 27 DYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
D + F +YG VT V LP+ G+ KGFAFVEF+T +EA AL+
Sbjct: 254 DSLGQAFGEYGTVTNVKLPQ--QDGRPKGFAFVEFATHKEAQAALD 297
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 26 HDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLNPC 78
D +E FSK G + V + G++KGFA VEF + E A KALE+ PC
Sbjct: 357 QDSLERHFSKCGPIKAVRVA-MGDDGRVKGFAHVEFESPESAQKALEMNGAPC 408
>gi|323348433|gb|EGA82678.1| Nsr1p [Saccharomyces cerevisiae Lalvin QA23]
Length = 254
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 32/49 (65%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
A+ D I +F+K+G+V V +P T + KGF +V+FS E+A KAL+
Sbjct: 118 ADRDAIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDAKKALD 166
>gi|348578893|ref|XP_003475216.1| PREDICTED: RNA-binding protein 28-like isoform 2 [Cavia porcellus]
Length = 705
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 37/51 (72%), Gaps = 2/51 (3%)
Query: 26 HDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLN 76
D +++VF+++G V V++P+ K GK++GFAFV+F EA KAL+ G+N
Sbjct: 127 EDDLKAVFTQFGAVLEVNIPR-KPDGKMRGFAFVQFKNLLEAGKALK-GMN 175
>gi|427714396|ref|YP_007063020.1| RRM domain-containing RNA-binding protein [Synechococcus sp. PCC
6312]
gi|427378525|gb|AFY62477.1| RRM domain-containing RNA-binding protein [Synechococcus sp. PCC
6312]
Length = 91
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 30/48 (62%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
A + +E+VF++YG V V LP + TG+ +GF FVE ST E A+
Sbjct: 12 ATQEDLEAVFAEYGSVKQVYLPVDRDTGRKRGFGFVEMSTDAEEDAAI 59
>gi|196002047|ref|XP_002110891.1| expressed hypothetical protein [Trichoplax adhaerens]
gi|190586842|gb|EDV26895.1| expressed hypothetical protein [Trichoplax adhaerens]
Length = 170
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
G +V + EA+ D + F++YG V + L + TG +KG+A VEF TK+EA A+
Sbjct: 73 GWIVFVANIHEEAQEDDVYEKFAEYGDVKNLHLNLDRRTGFIKGYALVEFETKKEAQAAI 132
Query: 72 E 72
+
Sbjct: 133 D 133
>gi|428768443|ref|YP_007160233.1| RNP-1 like RNA-binding protein [Cyanobacterium aponinum PCC
10605]
gi|428682722|gb|AFZ52189.1| RNP-1 like RNA-binding protein [Cyanobacterium aponinum PCC
10605]
Length = 81
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+E+D ++SVF+ YG+V V LP + T + +GF FVE S +E KA+E
Sbjct: 13 SEND-LQSVFADYGEVKRVYLPLDRETKRKRGFGFVEMSNDDEEIKAIE 60
>gi|346972077|gb|EGY15529.1| hypothetical protein VDAG_06693 [Verticillium dahliae VdLs.17]
Length = 1082
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 4/77 (5%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
GR + L P D + VFSK G V VS+P+ K GK G A++E ++KE+A KA+
Sbjct: 763 GRELHVTNLDPVVTEDELREVFSKIGPVQRVSIPRNKG-GKGYGTAYIELASKEQANKAV 821
Query: 72 ELGLNPCPTDYQSSILT 88
LN T +++SI+T
Sbjct: 822 A-ELN--STKFRTSIMT 835
Score = 38.5 bits (88), Expect = 0.49, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 21 PPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
PP A DY+ ++F G + V +P K + + F++V F T+E +TKA +
Sbjct: 681 PPTAGPDYLRNLFKDCGDIISVRMPSLKGNVRRR-FSYVTFRTREASTKATQ 731
>gi|302810024|ref|XP_002986704.1| hypothetical protein SELMODRAFT_182522 [Selaginella moellendorffii]
gi|300145592|gb|EFJ12267.1| hypothetical protein SELMODRAFT_182522 [Selaginella moellendorffii]
Length = 730
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 23 EAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
EA ++ +FS +G+V V LPK K G +GFAFVEF TK+EA A E
Sbjct: 636 EATRKDLKQLFSPFGQVKKVKLPK-KFDGNHRGFAFVEFVTKQEAQNAFE 684
Score = 37.7 bits (86), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 28/43 (65%)
Query: 29 IESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
+ S+F +YG+V V L K T + KG+ +V F+ EEAT+A+
Sbjct: 241 LASLFGQYGEVVQVHLICDKETNRSKGYGYVGFTLPEEATRAM 283
>gi|428320431|ref|YP_007118313.1| RNP-1 like RNA-binding protein [Oscillatoria nigro-viridis PCC
7112]
gi|428244111|gb|AFZ09897.1| RNP-1 like RNA-binding protein [Oscillatoria nigro-viridis PCC
7112]
Length = 102
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFST 63
L E +++ F +YG V V LP + TG+++GFAFVE ST
Sbjct: 7 NLSYEVTQEHLNQTFGEYGTVKRVQLPADRETGRMRGFAFVEMST 51
>gi|224066947|ref|XP_002302293.1| predicted protein [Populus trichocarpa]
gi|222844019|gb|EEE81566.1| predicted protein [Populus trichocarpa]
Length = 178
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 29/41 (70%)
Query: 32 VFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+F KYGKV V +P+ + TG+ +GFAFV + +EA KA++
Sbjct: 35 LFDKYGKVVDVFIPRDRRTGESRGFAFVRYKYADEAQKAVD 75
>gi|357148211|ref|XP_003574673.1| PREDICTED: uncharacterized protein LOC100824108 [Brachypodium
distachyon]
Length = 283
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%)
Query: 27 DYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
D + +F +YGKV V +P+ + TG +GFAFV + +EA KA++
Sbjct: 30 DDLYPLFDRYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVD 75
>gi|148241113|ref|YP_001226270.1| RNA-binding protein [Synechococcus sp. RCC307]
gi|147849423|emb|CAK26917.1| RNA-binding protein, RRM domain [Synechococcus sp. RCC307]
Length = 204
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 33/54 (61%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
LP AE + I +F+ +G+V SLP + TG+ +GFAFVE + + +A+E
Sbjct: 7 NLPFRAEQEDIIELFASFGEVANCSLPLERDTGRKRGFAFVEMADEATEERAIE 60
>gi|427726014|ref|YP_007073291.1| RNP-1 like RNA-binding protein [Leptolyngbya sp. PCC 7376]
gi|427357734|gb|AFY40457.1| RNP-1 like RNA-binding protein [Leptolyngbya sp. PCC 7376]
Length = 100
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 29/53 (54%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
L E D + VF+ YG V V +P + T + +GFAFVE S EE A+E
Sbjct: 8 LSYEVTEDDLRDVFADYGTVKRVQIPTDRETSRPRGFAFVEMSKDEEELAAIE 60
>gi|328769593|gb|EGF79636.1| hypothetical protein BATDEDRAFT_19718 [Batrachochytrium
dendrobatidis JAM81]
Length = 431
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 26 HDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLN 76
D I FS+YG++ V P + TG KGF +VE+ E A KA+E GLN
Sbjct: 294 EDEIRESFSQYGQLVSVRFPTDRDTGAFKGFGYVEYGDVETAQKAVE-GLN 343
>gi|428768452|ref|YP_007160242.1| RNP-1 like RNA-binding protein [Cyanobacterium aponinum PCC
10605]
gi|428682731|gb|AFZ52198.1| RNP-1 like RNA-binding protein [Cyanobacterium aponinum PCC
10605]
Length = 101
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
LP E + + VF++YG V+ V +P + TG+++GFAFVE + A++
Sbjct: 8 LPYEVTSEDLMEVFAEYGTVSRVHIPTDRETGRMRGFAFVEMENDNQEESAID 60
>gi|317968520|ref|ZP_07969910.1| RNA recognition motif-containing protein [Synechococcus sp.
CB0205]
Length = 157
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 32/53 (60%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
LP AE + + +F+ +G+V SLP + TG+ +GFAFVE E +A++
Sbjct: 8 LPFRAEQEDVAELFAPFGEVANCSLPLERDTGRKRGFAFVELVDPESEDRAID 60
>gi|168041522|ref|XP_001773240.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675435|gb|EDQ61930.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 799
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 29/42 (69%)
Query: 32 VFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALEL 73
+FS G V V +P + +G++KGFA+VEF +K+E KA EL
Sbjct: 448 LFSDCGTVLNVRIPTDRESGQIKGFAYVEFGSKDEVNKAFEL 489
>gi|71026176|ref|XP_762774.1| hypothetical protein [Theileria parva strain Muguga]
gi|68349726|gb|EAN30491.1| hypothetical protein TP03_0650 [Theileria parva]
Length = 76
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
G V++ + EA+ + + F YG VT + L + TG +KG+A +EF KEEA A+
Sbjct: 14 GWVLMVTGIHEEAQDEDVREAFENYGTVTNLHLNLDRRTGYVKGYALLEFKNKEEAENAM 73
>gi|330842446|ref|XP_003293189.1| hypothetical protein DICPUDRAFT_41662 [Dictyostelium purpureum]
gi|325076506|gb|EGC30286.1| hypothetical protein DICPUDRAFT_41662 [Dictyostelium purpureum]
Length = 880
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
++++K LP E+ I +F+ YG++ V +PK K G +GF FVEF T+EEA A+E
Sbjct: 781 KIIIK-NLPFESTTKEIRKLFAAYGEIQSVRIPK-KPNGGHRGFGFVEFLTEEEAKNAME 838
>gi|156350360|ref|XP_001622249.1| predicted protein [Nematostella vectensis]
gi|156208737|gb|EDO30149.1| predicted protein [Nematostella vectensis]
Length = 88
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 36/61 (59%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
G ++ + EA+ D I +FS YG++ + + + TG +KG+A VE+ T +EA AL
Sbjct: 4 GWILFVTNIHEEAQEDDIHELFSDYGEIKNLHVNLDRRTGFIKGYALVEYETFKEAQSAL 63
Query: 72 E 72
E
Sbjct: 64 E 64
>gi|156402343|ref|XP_001639550.1| predicted protein [Nematostella vectensis]
gi|156226679|gb|EDO47487.1| predicted protein [Nematostella vectensis]
Length = 862
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 15 VLKEKLPPEAEHDYIESVFSKYGKVTYVSLPK-FKSTGKLKGFAFVEFSTKEEATKALE 72
+L +P EA I +FS +G++ + LPK TG +GFAFV+F TK++A +A E
Sbjct: 763 ILVRNVPFEATTKEIRELFSTFGEIKTLRLPKKMTGTGPHRGFAFVDFLTKQDAKRAFE 821
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
GR+ L+ +E D I+ +F K+G ++ V+LP K T K G FV F E A KA
Sbjct: 363 GRLFLRNLAYSCSEED-IQHLFEKFGPLSEVNLPLDKHTNKTIGIGFVTFLMPEHAVKAF 421
>gi|157833885|pdb|1SXL|A Chain A, Resonance Assignments And Solution Structure Of The
Second Rna-Binding Domain Of Sex-Lethal Determined By
Multidimensional Heteronuclear Magnetic Resonance
Spectroscopy
Length = 97
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 35/60 (58%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLNPCP 79
LP D ++++F KYG + ++ + K TG+ +G AFV ++ +EEA +A+ N P
Sbjct: 21 LPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISALNNVIP 80
>gi|411119073|ref|ZP_11391453.1| RRM domain-containing RNA-binding protein [Oscillatoriales
cyanobacterium JSC-12]
gi|410710936|gb|EKQ68443.1| RRM domain-containing RNA-binding protein [Oscillatoriales
cyanobacterium JSC-12]
Length = 85
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 27/42 (64%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEF 61
L A D + VF++YG V VSLP + TGK++GFAFVE
Sbjct: 8 LSYRATADDLTEVFAEYGAVKRVSLPMDRETGKMRGFAFVEL 49
>gi|367052423|ref|XP_003656590.1| hypothetical protein THITE_135180 [Thielavia terrestris NRRL 8126]
gi|347003855|gb|AEO70254.1| hypothetical protein THITE_135180 [Thielavia terrestris NRRL 8126]
Length = 2006
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 26/59 (44%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
++V+K LP EA + ++FS+YGK+ + LPK K +GFAF EF+T EA AL
Sbjct: 731 KIVIK-NLPFEASKKDVRNLFSEYGKLVALRLPK-KFNHTSRGFAFAEFATPREALNAL 787
>gi|326434653|gb|EGD80223.1| RNA-binding protein 8A [Salpingoeca sp. ATCC 50818]
Length = 144
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 38/63 (60%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
G +V+ + EA+ D I F+++GK+ + L + TG +KG+A VE+ +EEA +A+
Sbjct: 51 GWIVIVTNVHEEAQDDDIYDKFTEFGKIKNLHLNLDRRTGYVKGYALVEYEQQEEAARAV 110
Query: 72 ELG 74
G
Sbjct: 111 SEG 113
>gi|307102563|gb|EFN50834.1| expressed protein [Chlorella variabilis]
Length = 383
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL-ELGLNPC 78
+PPE + +++ FS++G V V PK K T + + F FV F+ E+A +AL E +N C
Sbjct: 53 VPPECSEELVKAHFSQWGHVLDVYFPKRKDTFRRRPFCFVTFNRLEDAQRALAESPMNIC 112
>gi|541310|pir||S41505 12RNP2 protein - Synechococcus sp. (PCC 6301)
gi|961511|dbj|BAA09863.1| 12kDa RNA-binding, 12RNP2 [Synechococcus elongatus PCC 7942]
Length = 100
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 27/38 (71%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEF 61
A + + VF++YG V+ VSLP + TG+L+GFAF+E
Sbjct: 12 ATEEDVREVFAEYGPVSRVSLPDDRETGRLRGFAFIEM 49
>gi|1666299|emb|CAA63557.1| RNA-binding protein [Anabaena variabilis]
Length = 102
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 23 EAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLN 76
E + ++ VF++YG V V +P+ + TG+ +GFAFVE T E A+E GL+
Sbjct: 11 EVTENDLKGVFAEYGTVKRVQVPQDRETGRPRGFAFVEMGTDAEEDAAIE-GLD 63
>gi|440803264|gb|ELR24172.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 308
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLN 76
LPP ++ +Y+ +FS YG + V L + +TG KG+ FV F E+A +A+ + LN
Sbjct: 192 NLPPSSDDNYLYRLFSPYGALFNVKLVRDLATGTCKGYGFVNFMKMEDAQQAI-MALN 248
>gi|72382897|ref|YP_292252.1| RNA recognition motif-containing protein [Prochlorococcus marinus
str. NATL2A]
gi|124026639|ref|YP_001015754.1| hypothetical protein NATL1_19341 [Prochlorococcus marinus str.
NATL1A]
gi|72002747|gb|AAZ58549.1| RNA-binding region RNP-1 (RNA recognition motif) [Prochlorococcus
marinus str. NATL2A]
gi|123961707|gb|ABM76490.1| Hypothetical protein NATL1_19341 [Prochlorococcus marinus str.
NATL1A]
Length = 82
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 32/53 (60%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
L +AE + I VFS YG+VT LP + TG+ +GFAFV+ + KA++
Sbjct: 8 LSFDAEVEDIVGVFSSYGEVTNCKLPLERETGRKRGFAFVDMGDDAQEQKAID 60
>gi|357490719|ref|XP_003615647.1| Splicing factor, arginine/serine-rich [Medicago truncatula]
gi|355516982|gb|AES98605.1| Splicing factor, arginine/serine-rich [Medicago truncatula]
Length = 140
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 32/46 (69%)
Query: 27 DYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
D + +F KYGKV + +P+ + TG+ +GFAFV + +EA+KA++
Sbjct: 30 DDLFPLFDKYGKVVDIFIPRDRRTGESRGFAFVRYKYADEASKAVD 75
>gi|12850171|dbj|BAB28620.1| unnamed protein product [Mus musculus]
Length = 233
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 40/60 (66%), Gaps = 2/60 (3%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
R++++ L + D +++VF+ YG V V++PK K GK++GFAFV+F EA KAL+
Sbjct: 115 RLIIRN-LSFKCSEDDLKAVFTHYGTVLEVNIPK-KPDGKMRGFAFVQFKNLLEAGKALK 172
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+LPP A D +E +FS+ G V + K + +GF +V FS E+ +AL+
Sbjct: 10 RLPPSARSDQLEELFSQVGPVKQCFVVTEKGSKACRGFGYVTFSMLEDVQRALK 63
>gi|443328242|ref|ZP_21056842.1| RRM domain-containing RNA-binding protein [Xenococcus sp. PCC
7305]
gi|442792088|gb|ELS01575.1| RRM domain-containing RNA-binding protein [Xenococcus sp. PCC
7305]
Length = 92
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
L E + + VF++YG V V +P + TG+++GFAFVE ++ + KA+
Sbjct: 7 NLAYEINQEDLNEVFAEYGTVKRVHIPTDRETGRVRGFAFVEMESESDEDKAI 59
>gi|78211572|ref|YP_380351.1| RNA recognition motif-containing protein [Synechococcus sp.
CC9605]
gi|78196031|gb|ABB33796.1| RNA-binding region RNP-1 (RNA recognition motif) [Synechococcus
sp. CC9605]
Length = 173
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 37/57 (64%), Gaps = 3/57 (5%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEF---STKEEATKALE 72
LP AE + + +F+++G+VT +LP + TG+ +GFAF+E ST+E A + L+
Sbjct: 7 NLPFRAEQEDVIELFAQFGEVTNCALPLERDTGRKRGFAFIEMADESTEEAAIEGLQ 63
>gi|327305337|ref|XP_003237360.1| RNA binding protein [Trichophyton rubrum CBS 118892]
gi|326460358|gb|EGD85811.1| RNA binding protein [Trichophyton rubrum CBS 118892]
Length = 422
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 32/48 (66%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
A+ + ++ +FSKYG + + LP +G+ KGF +V+FS+ +EA AL
Sbjct: 354 ADENMVQELFSKYGMIQGIRLPTDPESGRPKGFGYVQFSSVDEARAAL 401
>gi|312074485|ref|XP_003139992.1| hypothetical protein LOAG_04407 [Loa loa]
Length = 567
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 37/61 (60%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
G +V + EA D + FS+YG++ ++L + TG LKG+A VE+ T++EA A+
Sbjct: 478 GWIVFVTNVHEEAHEDDVYERFSEYGEIKNMNLNIDRRTGFLKGYALVEYETQKEALAAI 537
Query: 72 E 72
E
Sbjct: 538 E 538
>gi|348506138|ref|XP_003440617.1| PREDICTED: RNA-binding protein 28-like [Oreochromis niloticus]
Length = 715
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 27 DYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
D+++ VF+K+G V V +P K GK++GFAFV F EA+KAL
Sbjct: 126 DHLKEVFAKFGTVVEVKIP-LKPDGKMRGFAFVLFKKVPEASKAL 169
Score = 41.6 bits (96), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
LP A ++ +E +FS+ G V + + K T K +GF FV +S +E+A +AL+
Sbjct: 11 LPDSASNERLEEIFSEIGPVKKCFVVRDKETEKCRGFGFVTYSMEEDAQRALK 63
>gi|226288637|gb|EEH44149.1| eukaryotic translation initiation factor 3 subunit G
[Paracoccidioides brasiliensis Pb18]
Length = 288
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
AE I +F ++G+VT V L K + T KGFAF+ F + +A +A E
Sbjct: 219 AEEQEIRDMFERFGRVTRVFLAKDRETNMAKGFAFISFQDRSDAARACE 267
>gi|261192142|ref|XP_002622478.1| eukaryotic translation initiation factor 3 [Ajellomyces
dermatitidis SLH14081]
gi|239589353|gb|EEQ71996.1| eukaryotic translation initiation factor 3 [Ajellomyces
dermatitidis SLH14081]
gi|239615073|gb|EEQ92060.1| eukaryotic translation initiation factor 3 [Ajellomyces
dermatitidis ER-3]
gi|327349815|gb|EGE78672.1| eukaryotic translation initiation factor 3 [Ajellomyces
dermatitidis ATCC 18188]
Length = 288
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
AE I +F ++G+VT V L K + T KGFAF+ F + +A +A E
Sbjct: 219 AEEQEIRDMFERFGRVTRVFLAKDRETNMAKGFAFISFQDRSDAARACE 267
>gi|407041519|gb|EKE40785.1| RNA recognition motif domain containing protein [Entamoeba
nuttalli P19]
Length = 189
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 30/43 (69%)
Query: 32 VFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELG 74
+F+K GKV V++P +++T K +GFA VEF++ KALEL
Sbjct: 24 IFAKCGKVLRVTIPIWRNTNKRRGFAVVEFASLASVEKALELA 66
>gi|295671551|ref|XP_002796322.1| eukaryotic translation initiation factor 3 RNA-binding subunit
[Paracoccidioides sp. 'lutzii' Pb01]
gi|226283302|gb|EEH38868.1| eukaryotic translation initiation factor 3 RNA-binding subunit
[Paracoccidioides sp. 'lutzii' Pb01]
Length = 288
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
AE I +F ++G+VT V L K + T KGFAF+ F + +A +A E
Sbjct: 219 AEEQEIRDMFERFGRVTRVFLAKDRETNMAKGFAFISFQDRSDAARACE 267
>gi|406965367|gb|EKD91001.1| Glycine-rich RNA-binding protein [uncultured bacterium]
Length = 87
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLNPCP 79
LP + + FSKYG++ ++ K + TG+ +GF FVEF+ + KA++ +N
Sbjct: 13 LPWGVDDSGLREAFSKYGEIIQATVLKDRQTGRSRGFGFVEFANDADGDKAIQE-MNGAD 71
Query: 80 TDYQSSILT 88
D ++ ++
Sbjct: 72 MDGRNIVVN 80
>gi|322711066|gb|EFZ02640.1| poly(A) RNA binding protein [Metarhizium anisopliae ARSEF 23]
Length = 743
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 18 EKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+ + EA D +F KYG +T SL + GK +GF FV F+T E A KA+E
Sbjct: 247 KNISTEASDDEFRELFEKYGDITSSSLAR-DQEGKSRGFGFVNFTTHESAAKAVE 300
>gi|212543387|ref|XP_002151848.1| pre-mRNA splicing factor (Prp24), putative [Talaromyces marneffei
ATCC 18224]
gi|210066755|gb|EEA20848.1| pre-mRNA splicing factor (Prp24), putative [Talaromyces marneffei
ATCC 18224]
Length = 1275
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 14/83 (16%)
Query: 23 EAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLN------ 76
+A + ++ +FSKYG + V +P K G+ +GF F+ FS KEEAT AL +
Sbjct: 1008 DARENDLKELFSKYGTIETVRIPS-KVNGEHRGFGFIVFSKKEEATAALAMHKQDFRGRP 1066
Query: 77 -------PCPTDYQSSILTTTSR 92
P P ++I+T +R
Sbjct: 1067 LQVKVSTPVPVKRAATIITPKAR 1089
Score = 38.5 bits (88), Expect = 0.55, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
G V PP A+ +I S+FS+ G++ V P K + F +V+F + ++A A
Sbjct: 906 GSTVYVTNFPPTADEAFIRSLFSEAGEIVEVRFPSLKYNTHRR-FCYVQFKSPDQAIAAT 964
Query: 72 ELGLN 76
+L N
Sbjct: 965 KLDNN 969
>gi|198415693|ref|XP_002128145.1| PREDICTED: similar to RNA binding motif protein 19 [Ciona
intestinalis]
Length = 766
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 5/71 (7%)
Query: 7 NNKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPK-----FKSTGKLKGFAFVEF 61
+ K+ +L +P +A IES+F +G++ V +PK G +GFAFV+F
Sbjct: 637 DKKQASSKILVRNVPFQANSGEIESLFKSFGELKSVRMPKKVGSITAQAGSHRGFAFVDF 696
Query: 62 STKEEATKALE 72
TK+EA KA E
Sbjct: 697 LTKQEAKKAFE 707
>gi|449540824|gb|EMD31812.1| hypothetical protein CERSUDRAFT_88684 [Ceriporiopsis subvermispora
B]
Length = 292
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 23 EAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+A D + F++YG + V +P + TGK KGFA+VEFS E + KA E
Sbjct: 154 DATEDTLWETFNEYGDIKSVRVPTDRETGKPKGFAYVEFSDIEASKKAFE 203
>gi|443899731|dbj|GAC77060.1| nuclear localization sequence binding protein, partial [Pseudozyma
antarctica T-34]
Length = 400
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 32/47 (68%)
Query: 26 HDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
D + + FS++G+V+ V LPK +G+ KGF +VEF+ +E A A++
Sbjct: 315 EDDVWNAFSEHGEVSGVRLPKDPDSGRPKGFGYVEFAAQESAQAAID 361
>gi|168042691|ref|XP_001773821.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674936|gb|EDQ61438.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 345
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Query: 29 IESVFSKYGKVTYVSLPKFKSTGK-LKGFAFVEFSTKEEATKALELGL 75
+E+ F +YG+V V LPK S+ L GFA VEFS++EEA K L++ L
Sbjct: 134 VETFFKQYGQVKSVRLPKHASSKNVLSGFAVVEFSSEEEAKKILKMEL 181
>gi|365760560|gb|EHN02272.1| Nsr1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 371
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 6/67 (8%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE------LGLNP 77
A+ D I +F+K+G+V V +P T + KGF +V+FS+ E++ KALE + P
Sbjct: 253 ADRDTIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSSLEDSKKALESLQGEYIDNRP 312
Query: 78 CPTDYQS 84
DY S
Sbjct: 313 VRLDYSS 319
>gi|157743332|ref|NP_001099058.1| poly(U)-binding-splicing factor PUF60 [Danio rerio]
gi|157423233|gb|AAI53302.1| LOC562370 protein [Danio rerio]
Length = 518
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 3 ELVENNKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFS 62
+L E + + R+ + + P+ D I+SVF +G++ SL + +TGK KG+ F+E+
Sbjct: 180 QLAEEARAFNRIYVAS-VHPDLSDDDIKSVFEAFGRIKSCSLARDPTTGKHKGYGFIEYD 238
Query: 63 TKEEATKAL 71
+ A A+
Sbjct: 239 KAQSAQDAV 247
Score = 35.4 bits (80), Expect = 4.7, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 25/50 (50%)
Query: 23 EAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
E D I F+ +G + + + T K KGFAFVE+ E A ALE
Sbjct: 102 ELGEDTIRQAFAPFGPIKSIDMSWDSVTLKHKGFAFVEYEVPEAAQLALE 151
>gi|440755781|ref|ZP_20934983.1| RNA recognition motif family protein [Microcystis aeruginosa
TAIHU98]
gi|440175987|gb|ELP55356.1| RNA recognition motif family protein [Microcystis aeruginosa
TAIHU98]
Length = 97
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
L + D + VF+ YGKV V +P K T + +GFAFVE K + TKA+
Sbjct: 8 LSYDISQDDLVEVFTDYGKVQRVHIPVDKETQRKRGFAFVEMENKAQETKAI 59
>gi|427418082|ref|ZP_18908265.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
7375]
gi|425760795|gb|EKV01648.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
7375]
Length = 98
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 23 EAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+A + + VF++YG V LP + TG+ +GFAFVE T E T A+E
Sbjct: 11 DATKEDVTDVFAEYGTVKSAHLPTDRETGRPRGFAFVEMETDAEETAAIE 60
>gi|342880270|gb|EGU81436.1| hypothetical protein FOXB_08018 [Fusarium oxysporum Fo5176]
Length = 295
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 30/48 (62%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
AE + +F ++G+VT V L K + TG KGFAF+ F+ + +A KA
Sbjct: 226 AEEQELRDMFERFGRVTRVFLAKDRETGMAKGFAFISFADRGDAVKAC 273
>gi|242795057|ref|XP_002482501.1| eukaryotic translation initiation factor 3 subunit EifCg, putative
[Talaromyces stipitatus ATCC 10500]
gi|218719089|gb|EED18509.1| eukaryotic translation initiation factor 3 subunit EifCg, putative
[Talaromyces stipitatus ATCC 10500]
Length = 292
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 31/49 (63%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
AE + +F ++G+VT V L + + T + KGFAF+ F+ + +A +A E
Sbjct: 223 AEEQELRDLFERFGRVTRVFLARDRDTQRAKGFAFISFADRSDAARACE 271
>gi|332708830|ref|ZP_08428801.1| RRM domain RNA-binding protein [Moorea producens 3L]
gi|332352372|gb|EGJ31941.1| RRM domain RNA-binding protein [Moorea producens 3L]
Length = 100
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 30/44 (68%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFST 63
L E + ++SVF +YG++ + +P + TG+L+GFAFVE +T
Sbjct: 8 LAREVTEEDLKSVFEEYGEIKRIHMPTDRETGRLRGFAFVEMNT 51
>gi|260833612|ref|XP_002611806.1| hypothetical protein BRAFLDRAFT_141671 [Branchiostoma floridae]
gi|229297178|gb|EEN67815.1| hypothetical protein BRAFLDRAFT_141671 [Branchiostoma floridae]
Length = 175
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
LPPE + I+ VF KYGK+ +V L G+ FAFVEF K +A A+
Sbjct: 13 LPPEVRQEDIKDVFYKYGKIIHVDL----KIGRGPPFAFVEFEDKRDADDAV 60
>gi|417404448|gb|JAA48976.1| Putative nucleolar protein fibrillarin nop77 rrm superfamily
[Desmodus rotundus]
Length = 763
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
Query: 27 DYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
D ++++F++YG V V++P+ K GK++GFAFV+F EA KAL
Sbjct: 128 DDLKTIFAQYGAVLEVNIPR-KPDGKMRGFAFVQFKNLLEAGKAL 171
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 29/53 (54%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
+LPP A + +E +FS+ G V + K + +GF +V FS E+ +AL
Sbjct: 10 RLPPSARTEQLEELFSQVGPVKQCFVVTEKGSKACRGFGYVTFSMPEDVQRAL 62
>gi|212536154|ref|XP_002148233.1| eukaryotic translation initiation factor 3 subunit EifCg, putative
[Talaromyces marneffei ATCC 18224]
gi|210070632|gb|EEA24722.1| eukaryotic translation initiation factor 3 subunit EifCg, putative
[Talaromyces marneffei ATCC 18224]
Length = 296
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 31/49 (63%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
AE + +F ++G+VT V L + + T + KGFAF+ F+ + +A +A E
Sbjct: 227 AEEQELRDLFERFGRVTRVFLARDRDTQRAKGFAFISFADRSDAARACE 275
>gi|226510383|ref|NP_001140384.1| hypothetical protein [Zea mays]
gi|194699256|gb|ACF83712.1| unknown [Zea mays]
gi|413925181|gb|AFW65113.1| hypothetical protein ZEAMMB73_855473 [Zea mays]
gi|448878214|gb|AGE46070.1| arginine/serine-rich splicing factor SC30 transcript IX [Zea
mays]
Length = 274
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%)
Query: 27 DYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
D + +F +YGKV V +P+ + TG +GFAFV + +EA KA++
Sbjct: 30 DDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAID 75
>gi|167523361|ref|XP_001746017.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775288|gb|EDQ88912.1| predicted protein [Monosiga brevicollis MX1]
Length = 119
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 28 YIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLNPCPTDYQSSIL 87
++E VF+ YG V V +P+ G+ + FA+V F T EEA +A++ LN D Q ++
Sbjct: 38 HLEEVFNCYGSVKQVEMPRGGRAGQRRKFAYVSFDTVEEAERAMDF-LNGAQLDGQKIVV 96
>gi|270159743|ref|ZP_06188399.1| RNA binding protein [Legionella longbeachae D-4968]
gi|289165486|ref|YP_003455624.1| hypothetical protein LLO_2158 [Legionella longbeachae NSW150]
gi|269988082|gb|EEZ94337.1| RNA binding protein [Legionella longbeachae D-4968]
gi|288858659|emb|CBJ12554.1| putative N-terminal part of eukaryotic RNA-binding protein
precursor [Legionella longbeachae NSW150]
Length = 90
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 35/54 (64%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALEL 73
LP +++ FSKYGKV + L K + TG +KGF F+ FST++EA +L++
Sbjct: 11 LPFGITEAALQAEFSKYGKVEELLLIKDRFTGHVKGFGFITFSTQQEAESSLKM 64
>gi|219114855|ref|XP_002178223.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217409958|gb|EEC49888.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 313
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 34/54 (62%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALEL 73
LP EA+ I+++F GK+ + L KF TG+ KG A + F+T+E A KAL L
Sbjct: 248 LPFEAKVKDIKAIFVSCGKLAHCKLIKFADTGRCKGQALLAFATEEAAEKALAL 301
>gi|427416267|ref|ZP_18906450.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
7375]
gi|425758980|gb|EKU99832.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
7375]
Length = 89
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%)
Query: 29 IESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+ +VF+KYG V + LP + TG+L+GF FV + E T+A+E
Sbjct: 17 LTAVFAKYGTVRSIYLPTDRDTGRLRGFGFVSMGAESEETEAIE 60
>gi|240276830|gb|EER40341.1| eukaryotic translation initiation factor 3 [Ajellomyces capsulatus
H143]
gi|325095132|gb|EGC48442.1| eukaryotic translation initiation factor 3 [Ajellomyces capsulatus
H88]
Length = 288
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
AE I +F ++G+VT V L K + T KGFAF+ F + +A +A E
Sbjct: 219 AEEQEIRDMFERFGRVTRVFLAKDRETNMAKGFAFISFQDRSDAARACE 267
>gi|62955567|ref|NP_001017797.1| cold inducible RNA binding protein [Danio rerio]
gi|62202782|gb|AAH93299.1| Zgc:112425 [Danio rerio]
gi|63100518|gb|AAH95030.1| Zgc:112425 [Danio rerio]
gi|182889498|gb|AAI65256.1| Zgc:112425 protein [Danio rerio]
Length = 185
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 29 IESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLNPCPTD 81
+E FSKYG +T V + + + T + +GF FV F ++A ALE G+N D
Sbjct: 21 LEDAFSKYGVITNVHVARNRETNRSRGFGFVTFENPDDAKDALE-GMNGKSVD 72
>gi|401842356|gb|EJT44580.1| NSR1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 393
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 6/67 (8%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE------LGLNP 77
A+ D I +F+K+G+V V +P T + KGF +V+FS+ E++ KALE + P
Sbjct: 253 ADRDTIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSSLEDSKKALESLQGEYIDNRP 312
Query: 78 CPTDYQS 84
DY S
Sbjct: 313 VRLDYSS 319
>gi|224099521|ref|XP_002334472.1| predicted protein [Populus trichocarpa]
gi|222872360|gb|EEF09491.1| predicted protein [Populus trichocarpa]
Length = 101
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 29/41 (70%)
Query: 32 VFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+F KYGKV + +P+ + TG+ +GFAFV + +EA KA+E
Sbjct: 35 LFDKYGKVVDIFIPRDRRTGESRGFAFVRYKYADEAQKAVE 75
>gi|158339703|ref|YP_001520710.1| RNA-binding protein [Acaryochloris marina MBIC11017]
gi|158309944|gb|ABW31560.1| RNA-binding protein [Acaryochloris marina MBIC11017]
Length = 89
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 31/53 (58%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
L +A + +VF++YG V V +P + TG+ +GFAFVE E KA++
Sbjct: 8 LSFDATEQDLNAVFAEYGTVKQVKMPTDRETGRKRGFAFVEMGNDAEEAKAID 60
>gi|410899747|ref|XP_003963358.1| PREDICTED: RNA-binding protein 10-like [Takifugu rubripes]
Length = 811
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 6 ENNKKYGRVVLKEKLPPEAEHDYIESVFSKYG-KVTYVSLPKFKSTGKLKGFAFVEFSTK 64
++N++ +++ LPP A + I + + G + V L + KS+G+ +GFAFVEF+
Sbjct: 202 DHNQRPSNIIMLRMLPPNATANEIRAQLQEQGIQPREVRLMRNKSSGQSRGFAFVEFNVI 261
Query: 65 EEATKALE 72
+EAT+ +E
Sbjct: 262 QEATRWME 269
>gi|335293857|ref|XP_003357073.1| PREDICTED: polyadenylate-binding protein 4-like [Sus scrofa]
Length = 370
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 2 AELVENNKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEF 61
AEL ++ V +K + + + ++ VFSKYGK V + + S+GK KGF FV F
Sbjct: 180 AELQNKANEFTNVYIK-NFGDDMDDERLKEVFSKYGKTLSVKVMR-DSSGKSKGFGFVSF 237
Query: 62 STKEEATKALE 72
+ E A KA+E
Sbjct: 238 DSHEAAKKAVE 248
>gi|115473447|ref|NP_001060322.1| Os07g0623300 [Oryza sativa Japonica Group]
gi|33146621|dbj|BAC79909.1| putative splicing factor, arginine/serine-rich 2 (Splicing factor
SC35) [Oryza sativa Japonica Group]
gi|113611858|dbj|BAF22236.1| Os07g0623300 [Oryza sativa Japonica Group]
gi|215687327|dbj|BAG91873.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222637485|gb|EEE67617.1| hypothetical protein OsJ_25178 [Oryza sativa Japonica Group]
Length = 275
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 31/46 (67%)
Query: 27 DYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
D + +F KYG+V + +P+ + TG +GFAFV + ++EA KA++
Sbjct: 30 DDLSPLFEKYGEVVDIYIPRDRRTGDSRGFAFVRYKYEDEAQKAVD 75
>gi|348503274|ref|XP_003439190.1| PREDICTED: poly(U)-binding-splicing factor PUF60-like [Oreochromis
niloticus]
Length = 526
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 3 ELVENNKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFS 62
+L E + Y R+ + + P+ D I+SVF +G++ +L + +TG+ +GF F+E+
Sbjct: 187 QLAEEARAYNRIYVAS-VHPDLSDDDIKSVFEAFGRIKSCTLARDPTTGRHRGFGFIEYE 245
Query: 63 TKEEATKAL 71
+ A A+
Sbjct: 246 KPQSALDAV 254
Score = 36.2 bits (82), Expect = 2.9, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 25/50 (50%)
Query: 23 EAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
E D I F+ +G + + + T K KGFAFVE+ E A ALE
Sbjct: 109 ELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYDVPEAAQLALE 158
>gi|218200049|gb|EEC82476.1| hypothetical protein OsI_26921 [Oryza sativa Indica Group]
Length = 271
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 31/46 (67%)
Query: 27 DYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
D + +F KYG+V + +P+ + TG +GFAFV + ++EA KA++
Sbjct: 30 DDLSPLFEKYGEVVDIYIPRDRRTGDSRGFAFVRYKYEDEAQKAVD 75
>gi|126656762|ref|ZP_01727976.1| RNA-binding region RNP-1 [Cyanothece sp. CCY0110]
gi|126621982|gb|EAZ92690.1| RNA-binding region RNP-1 [Cyanothece sp. CCY0110]
Length = 83
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 29/54 (53%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
LP E + VFS YG V V +P + TG+ +GFAFVE TK A+E
Sbjct: 7 NLPYEVTEADLNFVFSDYGSVKRVHVPTDRDTGRPRGFAFVELETKANEFNAIE 60
>gi|118474079|ref|YP_892397.1| RNA-binding region RNP-1 [Campylobacter fetus subsp. fetus 82-40]
gi|424821065|ref|ZP_18246103.1| RNA-binding region RNP-1 [Campylobacter fetus subsp. venerealis
NCTC 10354]
gi|118413305|gb|ABK81725.1| RNA-binding region RNP-1 [Campylobacter fetus subsp. fetus 82-40]
gi|342327844|gb|EGU24328.1| RNA-binding region RNP-1 [Campylobacter fetus subsp. venerealis
NCTC 10354]
Length = 82
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%)
Query: 29 IESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+ VFS +G+VT + K K T + KGF FVE S+ E+A KA+E
Sbjct: 18 LREVFSSFGEVTRAKIVKDKETNRSKGFGFVEMSSDEQAKKAIE 61
>gi|19115351|ref|NP_594439.1| RNA-binding protein (predicted) [Schizosaccharomyces pombe 972h-]
gi|74675984|sp|O42847.1|YFH9_SCHPO RecName: Full=Uncharacterized RNA-binding protein C23A1.09
gi|2879797|emb|CAA16983.1| RNA-binding protein (predicted) [Schizosaccharomyces pombe]
Length = 121
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 39/61 (63%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
G +++ + PEA + +E +F+ +G V + L + TG +KG+A +E++T E+A KA+
Sbjct: 9 GYIIIVTGVHPEATEEQVEDLFADFGPVKNLHLNLDRRTGYVKGYALIEYATLEQAQKAV 68
Query: 72 E 72
+
Sbjct: 69 D 69
>gi|355715663|gb|AES05398.1| RNA binding motif protein 28 [Mustela putorius furo]
Length = 756
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 25/63 (39%), Positives = 42/63 (66%), Gaps = 2/63 (3%)
Query: 10 KYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATK 69
K R++++ L + D +++VF++YG V V++P+ K GK++GFAFV+F EA K
Sbjct: 112 KKARLIIR-NLSFKCSEDDLKTVFAQYGAVLEVNIPR-KPDGKMRGFAFVQFKNLLEAGK 169
Query: 70 ALE 72
AL+
Sbjct: 170 ALK 172
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 32/61 (52%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
G + +LPP A + +E +FS+ G V + K + +GF +V FS E+ +AL
Sbjct: 3 GLTLFVGRLPPSARSEQLEELFSQVGPVKQCFVVTEKGSKACRGFGYVTFSMLEDVQRAL 62
Query: 72 E 72
+
Sbjct: 63 K 63
>gi|1616770|gb|AAB16848.1| putative poly(A)-binding protein FabM [Emericella nidulans]
Length = 705
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 18 EKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+ + PE E + +F K+G++T +L + S GK +GF FV FST E A A+E
Sbjct: 228 KNIDPEVEDEEFRKLFEKFGEITSATLSR-DSEGKSRGFGFVNFSTHESAQAAVE 281
>gi|225554798|gb|EEH03093.1| eukaryotic translation initiation factor 3 [Ajellomyces capsulatus
G186AR]
Length = 299
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
AE I +F ++G+VT V L K + T KGFAF+ F + +A +A E
Sbjct: 230 AEEQEIRDMFERFGRVTRVFLAKDRETNMAKGFAFISFQDRSDAARACE 278
>gi|224073347|ref|XP_002304081.1| predicted protein [Populus trichocarpa]
gi|222841513|gb|EEE79060.1| predicted protein [Populus trichocarpa]
Length = 142
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 31/46 (67%)
Query: 27 DYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
D + +F KYGKV + +P+ + TG+ +GFAFV + +EA KA+E
Sbjct: 30 DDLFPLFDKYGKVVDIFIPRDRRTGESRGFAFVRYKYADEAQKAVE 75
>gi|67527154|ref|XP_661604.1| hypothetical protein AN4000.2 [Aspergillus nidulans FGSC A4]
gi|40740281|gb|EAA59471.1| conserved hypothetical protein [Aspergillus nidulans FGSC A4]
Length = 711
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 18 EKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+ + PE E + +F K+G++T +L + S GK +GF FV FST E A A+E
Sbjct: 228 KNIDPEVEDEEFRKLFEKFGEITSATLSR-DSEGKSRGFGFVNFSTHESAQAAVE 281
>gi|403257503|ref|XP_003921356.1| PREDICTED: RNA-binding protein 28 [Saimiri boliviensis boliviensis]
Length = 640
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 37/50 (74%), Gaps = 2/50 (4%)
Query: 27 DYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLN 76
D ++++F+++G V V++P+ K GK++GFAFV+F EA KAL+ G+N
Sbjct: 128 DDLKTIFAQFGAVLEVNIPR-KPDGKMRGFAFVQFKNLLEAGKALK-GMN 175
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 29/53 (54%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
+LPP A + +E +FS+ G V + K + +GF +V FS E+ +AL
Sbjct: 10 RLPPSARSEQLEELFSQVGPVKQCFVVTEKGSKTCRGFGYVTFSMLEDVQRAL 62
>gi|324527854|gb|ADY48852.1| RNA-binding protein 8A [Ascaris suum]
Length = 165
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
G +V + EA D + F+++G + ++L + TG LKG+A VE+ T++EA A+
Sbjct: 74 GWIVFVTNVHEEAHEDEVCDRFAEFGDIKNINLNIDRRTGFLKGYALVEYETQKEALAAI 133
Query: 72 ELGLN 76
E GLN
Sbjct: 134 E-GLN 137
>gi|166235127|ref|NP_598686.2| RNA-binding protein 28 [Mus musculus]
gi|341942269|sp|Q8CGC6.4|RBM28_MOUSE RecName: Full=RNA-binding protein 28; AltName: Full=RNA-binding
motif protein 28
Length = 750
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Query: 27 DYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
D +++VF+ YG V V++PK K GK++GFAFV+F EA KAL+
Sbjct: 128 DDLKAVFTHYGTVLEVNIPK-KPDGKMRGFAFVQFKNLLEAGKALK 172
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+LPP A D +E +FS+ G V + K + +GF +V FS E+ +AL+
Sbjct: 10 RLPPSARSDQLEELFSQVGPVKQCFVVTEKGSKACRGFGYVTFSMLEDVQRALK 63
>gi|156403590|ref|XP_001639991.1| predicted protein [Nematostella vectensis]
gi|156227123|gb|EDO47928.1| predicted protein [Nematostella vectensis]
Length = 91
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 36/61 (59%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
G ++ + EA+ D I +FS YG++ + + + TG +KG+A VE+ T +EA AL
Sbjct: 4 GWILFVTNIHEEAQEDDIHELFSDYGEIKNLHVNLDRRTGFIKGYALVEYETFKEAQSAL 63
Query: 72 E 72
E
Sbjct: 64 E 64
>gi|186681280|ref|YP_001864476.1| RNP-1 like RNA-binding protein [Nostoc punctiforme PCC 73102]
gi|186463732|gb|ACC79533.1| RNP-1 like RNA-binding protein [Nostoc punctiforme PCC 73102]
Length = 100
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 32/53 (60%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
L E + + + VF++YG V V LP + TG+++GF FVE + + T A+E
Sbjct: 8 LSYEVKEEDLRHVFAEYGTVKNVQLPIDRETGRMRGFGFVEMESDAQETAAIE 60
>gi|448878330|gb|AGE46128.1| arginine/serine-rich splicing factor SC31 transcript VI [Sorghum
bicolor]
Length = 107
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%)
Query: 27 DYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
D + +F +YGKV V +P+ + TG +GFAFV + +EA KA++
Sbjct: 30 DDLYPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAID 75
>gi|58265336|ref|XP_569824.1| RNA binding protein [Cryptococcus neoformans var. neoformans JEC21]
gi|57226056|gb|AAW42517.1| RNA binding protein, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 393
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 37/60 (61%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+V++ L +++ +FS+YG++T + LP FK +G KG A +EF T A+KA++
Sbjct: 59 KVIVVSGLSKNVMKGHLDEIFSEYGRITGIDLPLFKVSGLNKGKAAIEFDTPAAASKAVK 118
>gi|425453862|ref|ZP_18833615.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC
9807]
gi|389799968|emb|CCI20517.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC
9807]
Length = 97
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
LP E + + + VF++YG + V LP + T + +GFAFVE T E+ + A+
Sbjct: 8 LPFEVDQNDVVEVFTEYGTIKRVHLPMDRETKRKRGFAFVEMETPEQESAAI 59
>gi|340371235|ref|XP_003384151.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like [Amphimedon
queenslandica]
Length = 306
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 1 MAELVENNKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVE 60
MA + + NK RV+ L E + S F +G + +S+P S+ K +GFAFVE
Sbjct: 1 MATIAQANK---RVLYVGGLSEEVNEKILHSAFIPFGDIVDISIPLDYSSQKHRGFAFVE 57
Query: 61 FSTKEEATKALE 72
F E+A A++
Sbjct: 58 FEATEDAAAAID 69
>gi|162312534|ref|XP_001713104.1| RNA-binding protein [Schizosaccharomyces pombe 972h-]
gi|1723533|sp|Q10422.1|YDC1_SCHPO RecName: Full=Uncharacterized RNA-binding protein C25G10.01
gi|159884012|emb|CAB16378.2| RNA-binding protein [Schizosaccharomyces pombe]
Length = 297
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 32/48 (66%)
Query: 25 EHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+ D ++ +FSK+G VT+V + + T +GF F+ FST EEAT A++
Sbjct: 113 QEDELQQIFSKFGTVTHVRIMREPVTKASRGFGFLSFSTVEEATSAID 160
>gi|443726126|gb|ELU13419.1| hypothetical protein CAPTEDRAFT_222447 [Capitella teleta]
Length = 177
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 31/53 (58%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+ EA+ D I FS+YG + V L + TG LKG++ VE+ T EA A+E
Sbjct: 79 VQEEAQEDDIMDKFSEYGNIKNVHLNLDRRTGYLKGYSLVEYDTYNEAQSAME 131
>gi|26252146|gb|AAH40811.1| Rbm28 protein [Mus musculus]
Length = 750
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Query: 27 DYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
D +++VF+ YG V V++PK K GK++GFAFV+F EA KAL+
Sbjct: 128 DDLKAVFTHYGTVLEVNIPK-KPDGKMRGFAFVQFKNLLEAGKALK 172
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+LPP A D +E +FS+ G V + K + +GF +V FS E+ +AL+
Sbjct: 10 RLPPSARSDQLEELFSQVGPVKQCFVVTEKGSKACRGFGYVTFSMLEDVQRALK 63
>gi|417399827|gb|JAA46899.1| Putative polyadenylate-binding protein rrm superfamily [Desmodus
rotundus]
Length = 370
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 2 AELVENNKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEF 61
AEL ++ V +K + + + ++ VFS+YGK+ V + S+GK KGF FV F
Sbjct: 180 AELQNKANEFTNVYIK-NFGDDMDDERLKEVFSQYGKIVSVKVMT-DSSGKSKGFGFVSF 237
Query: 62 STKEEATKALE 72
T E A +A+E
Sbjct: 238 DTHEAAQRAVE 248
>gi|405965605|gb|EKC30968.1| RNA-binding protein 28 [Crassostrea gigas]
Length = 818
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 36/58 (62%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATK 69
G+ + +P + + + +E FS+YGK+ YV + TG+ KG AFV+F T++EA K
Sbjct: 445 GKTLFIRNVPFDIDEESLEDEFSEYGKINYVKIVVNPKTGQPKGTAFVQFKTQKEAEK 502
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 45/73 (61%), Gaps = 3/73 (4%)
Query: 6 ENNKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKE 65
+N + R++++ L + + ++ F K+G+VT V +PK K+ GKL+GF V+F +
Sbjct: 236 KNTARKARLIIRN-LSFKCSEEKLKETFEKFGEVTEVQIPKLKN-GKLQGFGIVQFKEVD 293
Query: 66 EATKAL-ELGLNP 77
+A+KA+ E+ P
Sbjct: 294 DASKAMAEMNAKP 306
>gi|322698722|gb|EFY90490.1| poly(A) RNA binding protein [Metarhizium acridum CQMa 102]
Length = 742
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 18 EKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+ + EA D +F KYG +T SL + GK +GF FV F+T E A KA+E
Sbjct: 246 KNISTEASDDEFRELFEKYGDITSSSLAR-DQEGKSRGFGFVNFTTHESAAKAVE 299
>gi|294875640|ref|XP_002767414.1| Heterogeneous nuclear ribonucleoprotein G, putative [Perkinsus
marinus ATCC 50983]
gi|239868981|gb|EER00132.1| Heterogeneous nuclear ribonucleoprotein G, putative [Perkinsus
marinus ATCC 50983]
Length = 339
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELG 74
+P + + ++ FS+YG + + K + TGK +GFA+V +ST EEA A+ G
Sbjct: 106 IPSDLDQGRLDQFFSQYGNIVDSVVMKDRITGKPRGFAYVTYSTAEEAQTAINAG 160
>gi|431911731|gb|ELK13879.1| RNA-binding protein 28 [Pteropus alecto]
Length = 758
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 23 EAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+ D +++VF++YG V V++PK K GK++GFAFV+F EA KAL+
Sbjct: 121 KCSEDDLKTVFAQYGAVLEVNIPK-KPDGKMRGFAFVQFKNLLEAGKALK 169
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 32/61 (52%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
G + +LPP A + +E +FS+ G V + K + +GF +V FS E+ +AL
Sbjct: 3 GLTLFVGRLPPSARSEQLEELFSQVGPVKQCFVVTEKGSKACRGFGYVTFSMLEDVQRAL 62
Query: 72 E 72
+
Sbjct: 63 K 63
>gi|375265706|ref|YP_005023149.1| RNA-binding protein [Vibrio sp. EJY3]
gi|369841027|gb|AEX22171.1| RNA-binding protein [Vibrio sp. EJY3]
Length = 79
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 25 EHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
EH+ I +FS YG VT +L + TG+ KGFAFVE K+EA ALE
Sbjct: 14 EHE-IRVLFSAYGTVTECNLVLDQETGQSKGFAFVEMPDKDEAKNALE 60
>gi|154272443|ref|XP_001537074.1| hypothetical protein HCAG_08183 [Ajellomyces capsulatus NAm1]
gi|150409061|gb|EDN04517.1| hypothetical protein HCAG_08183 [Ajellomyces capsulatus NAm1]
Length = 288
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
AE I +F ++G+VT V L K + T KGFAF+ F + +A +A E
Sbjct: 219 AEEQEIRDMFERFGRVTRVFLAKDRETNMAKGFAFISFQDRSDAARACE 267
>gi|78710141|ref|NP_727163.2| Sex lethal, isoform E [Drosophila melanogaster]
gi|78710163|ref|NP_727165.2| Sex lethal, isoform A [Drosophila melanogaster]
gi|45446831|gb|AAO41638.2| Sex lethal, isoform A [Drosophila melanogaster]
gi|71854536|gb|AAZ52512.1| Sex lethal, isoform E [Drosophila melanogaster]
Length = 314
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLNPC 78
LP D ++++F KYG + ++ + K TG+ +G AFV ++ +EEA +A+ N
Sbjct: 177 NLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISALNNVI 236
Query: 79 P 79
P
Sbjct: 237 P 237
>gi|74142527|dbj|BAE33848.1| unnamed protein product [Mus musculus]
gi|148681846|gb|EDL13793.1| RNA binding motif protein 28, isoform CRA_b [Mus musculus]
Length = 750
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Query: 27 DYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
D +++VF+ YG V V++PK K GK++GFAFV+F EA KAL+
Sbjct: 128 DDLKAVFTHYGTVLEVNIPK-KPDGKMRGFAFVQFKNLLEAGKALK 172
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+LPP A D +E +FS+ G V + K + +GF +V FS E+ +AL+
Sbjct: 10 RLPPSARSDQLEELFSQVGPVKQCFVVTEKGSKACRGFGYVTFSMLEDVQRALK 63
>gi|302810175|ref|XP_002986779.1| hypothetical protein SELMODRAFT_425694 [Selaginella moellendorffii]
gi|300145433|gb|EFJ12109.1| hypothetical protein SELMODRAFT_425694 [Selaginella moellendorffii]
Length = 199
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 36/67 (53%)
Query: 1 MAELVENNKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVE 60
+ E E K+ VV ++P D + FS++G VT + L + K TGK K +AFVE
Sbjct: 36 LTEFDEQGKRRSSVVYIGRIPHGFYEDQMRGYFSQFGAVTRLRLSRNKKTGKSKHYAFVE 95
Query: 61 FSTKEEA 67
F T E A
Sbjct: 96 FETPEIA 102
>gi|158563873|sp|Q5B630.2|PABP_EMENI RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|259481418|tpe|CBF74916.1| TPA: Polyadenylate-binding protein, cytoplasmic and nuclear
(Poly(A)-binding protein)(PABP)(Polyadenylate
tail-binding protein)
[Source:UniProtKB/Swiss-Prot;Acc:Q5B630] [Aspergillus
nidulans FGSC A4]
Length = 732
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 18 EKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+ + PE E + +F K+G++T +L + S GK +GF FV FST E A A+E
Sbjct: 228 KNIDPEVEDEEFRKLFEKFGEITSATLSR-DSEGKSRGFGFVNFSTHESAQAAVE 281
>gi|402219166|gb|EJT99240.1| eukaryotic translation initiation factor 3 [Dacryopinax sp. DJM-731
SS1]
Length = 297
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 33/53 (62%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
L +AE D + +F ++G+V V + + + TG KG+AFV F ++ A +AL+
Sbjct: 219 LSEDAEEDDLRDLFQRFGRVARVFIGRDRETGVGKGYAFVSFEDRDSAQRALD 271
>gi|338175402|ref|YP_004652212.1| hypothetical protein PUV_14080 [Parachlamydia acanthamoebae UV-7]
gi|336479760|emb|CCB86358.1| putative uncharacterized protein [Parachlamydia acanthamoebae
UV-7]
Length = 111
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 28/45 (62%)
Query: 27 DYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
D + SVF K GKV V + + TGK KGF FVE + E+A KA+
Sbjct: 17 DILRSVFEKIGKVVSVKIITDQYTGKSKGFGFVEMESSEDADKAI 61
>gi|298707093|emb|CBJ29885.1| splicing factor, arginine/serine-rich 2 (SC-35), isoform CRA_a
[Ectocarpus siliculosus]
Length = 289
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 12 GRVVLK-EKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKA 70
G V LK + +P + D + +F KYG++ V +P+ TG+ +GFAFV F + +A A
Sbjct: 25 GMVTLKVDNVPYNSSIDDLRRIFEKYGELGDVYMPRDLRTGEPRGFAFVRFMDQRDADDA 84
Query: 71 LE 72
++
Sbjct: 85 ID 86
>gi|262360006|gb|ACY56908.1| RH48596p [Drosophila melanogaster]
Length = 339
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLNPC 78
LP D ++++F KYG + ++ + K TG+ +G AFV ++ +EEA +A+ N
Sbjct: 202 NLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISALKNVI 261
Query: 79 P 79
P
Sbjct: 262 P 262
>gi|167385948|ref|XP_001737551.1| 29 kDa ribonucleoprotein A, chloroplast precursor [Entamoeba dispar
SAW760]
gi|165899593|gb|EDR26160.1| 29 kDa ribonucleoprotein A, chloroplast precursor, putative
[Entamoeba dispar SAW760]
Length = 302
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 30/43 (69%)
Query: 32 VFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELG 74
+F+K GKV V++P +++T K +GFA VEF++ KALEL
Sbjct: 131 IFAKCGKVLRVTIPIWRNTNKRRGFAIVEFASLASVEKALELA 173
>gi|425448845|ref|ZP_18828689.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC
7941]
gi|389767706|emb|CCI06978.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC
7941]
Length = 97
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
++ D +E VF YG+V V +P K TG+ +GFAFVE +K + T A+E
Sbjct: 13 SQEDLVE-VFKDYGEVQRVHIPVDKETGRKRGFAFVEMVSKGQETAAIE 60
>gi|320162535|ref|YP_004175760.1| RNA-binding domain-containing protein [Anaerolinea thermophila
UNI-1]
gi|319996389|dbj|BAJ65160.1| RNA-binding region [Anaerolinea thermophila UNI-1]
Length = 105
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLN 76
LP A D + S F+ YG VT ++ K + +G+ +GF FVE + EA A++ GLN
Sbjct: 7 NLPFSANEDDLRSAFAAYGTVTSAAVIKDQFSGQSRGFGFVEMPNQAEAEAAIQ-GLN 63
>gi|134025329|gb|AAI35084.1| LOC562370 protein [Danio rerio]
Length = 379
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 3 ELVENNKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFS 62
+L E + + R+ + + P+ D I+SVF +G++ SL + +TGK KG+ F+E+
Sbjct: 180 QLAEEARAFNRIYVAS-VHPDLSDDDIKSVFEAFGRIKSCSLARDPTTGKHKGYGFIEYD 238
Query: 63 TKEEATKAL 71
+ A A+
Sbjct: 239 KAQSAQDAV 247
Score = 35.0 bits (79), Expect = 5.1, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 25/50 (50%)
Query: 23 EAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
E D I F+ +G + + + T K KGFAFVE+ E A ALE
Sbjct: 102 ELGEDTIRQAFAPFGPIKSIDMSWDSVTLKHKGFAFVEYEVPEAAQLALE 151
>gi|390359786|ref|XP_003729564.1| PREDICTED: 29 kDa ribonucleoprotein B, chloroplastic-like
[Strongylocentrotus purpuratus]
Length = 220
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 15 VLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELG 74
+ LP + +E +F +GK++ V+L K K +G +GF F+ F T E+A A++ G
Sbjct: 18 IFVSNLPKTWDEGRMEKLFETFGKISQVNLMKNKESGDSRGFGFITFDTAEDANDAIQ-G 76
Query: 75 LN 76
+N
Sbjct: 77 MN 78
>gi|349578366|dbj|GAA23532.1| K7_Nsr1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 416
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 32/49 (65%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
A+ D I +F+K+G+V V +P T + KGF +V+FS E+A KAL+
Sbjct: 280 ADRDAIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDAKKALD 328
>gi|6321599|ref|NP_011675.1| Nsr1p [Saccharomyces cerevisiae S288c]
gi|128576|sp|P27476.1|NSR1_YEAST RecName: Full=Nuclear localization sequence-binding protein;
AltName: Full=p67
gi|4058|emb|CAA40472.1| nuclear localization sequence binding protein [Saccharomyces
cerevisiae]
gi|1045265|emb|CAA59817.1| NSR1 [Saccharomyces cerevisiae]
gi|1323271|emb|CAA97173.1| NSR1 [Saccharomyces cerevisiae]
gi|285812350|tpg|DAA08250.1| TPA: Nsr1p [Saccharomyces cerevisiae S288c]
gi|392299413|gb|EIW10507.1| Nsr1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 414
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 32/49 (65%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
A+ D I +F+K+G+V V +P T + KGF +V+FS E+A KAL+
Sbjct: 278 ADRDAIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDAKKALD 326
>gi|72383177|ref|YP_292532.1| RNA recognition motif-containing protein [Prochlorococcus marinus
str. NATL2A]
gi|72003027|gb|AAZ58829.1| RNA-binding region RNP-1 (RNA recognition motif) [Prochlorococcus
marinus str. NATL2A]
Length = 250
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 33/54 (61%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
LP AE + + +FS +G+V+ SLP + TG+ +GFAFVE + + A+E
Sbjct: 7 NLPFRAEQEDVMELFSPFGEVSNCSLPLERDTGRKRGFAFVEMADEAVEASAIE 60
>gi|281359985|ref|NP_001162689.1| Sex lethal, isoform AB [Drosophila melanogaster]
gi|272506012|gb|ACZ95225.1| Sex lethal, isoform AB [Drosophila melanogaster]
Length = 322
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLNPC 78
LP D ++++F KYG + ++ + K TG+ +G AFV ++ +EEA +A+ N
Sbjct: 185 NLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISALNNVI 244
Query: 79 P 79
P
Sbjct: 245 P 245
>gi|124024725|ref|YP_001013841.1| RNA recognition motif-containing protein [Prochlorococcus marinus
str. NATL1A]
gi|123959793|gb|ABM74576.1| RNA-binding region RNP-1 (RNA recognition motif) [Prochlorococcus
marinus str. NATL1A]
Length = 250
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 33/54 (61%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
LP AE + + +FS +G+V+ SLP + TG+ +GFAFVE + + A+E
Sbjct: 7 NLPFRAEQEDVMELFSPFGEVSNCSLPLERDTGRKRGFAFVEMADEAVEASAIE 60
>gi|425434851|ref|ZP_18815315.1| putative RNA-binding protein rbpA [Microcystis aeruginosa PCC
9432]
gi|389675575|emb|CCH95322.1| putative RNA-binding protein rbpA [Microcystis aeruginosa PCC
9432]
Length = 97
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 31/53 (58%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
L E + + VF +YG+V V +P K TG+ +GFAFVE K + T A+E
Sbjct: 8 LSYEISQEALVDVFREYGEVKRVHIPVDKETGRKRGFAFVEMENKAQETTAIE 60
>gi|444318191|ref|XP_004179753.1| hypothetical protein TBLA_0C04360 [Tetrapisispora blattae CBS 6284]
gi|387512794|emb|CCH60234.1| hypothetical protein TBLA_0C04360 [Tetrapisispora blattae CBS 6284]
Length = 403
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%)
Query: 23 EAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+A+ D I VFSKYG++ V +P T + KGF +V++ E A KAL+
Sbjct: 271 DADRDNIYEVFSKYGEIISVRIPTHPETEQPKGFGYVQYGDVESAKKALD 320
>gi|448878212|gb|AGE46069.1| arginine/serine-rich splicing factor SC30 transcript VIII [Zea
mays]
Length = 261
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%)
Query: 27 DYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
D + +F +YGKV V +P+ + TG +GFAFV + +EA KA++
Sbjct: 30 DDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAID 75
>gi|427792715|gb|JAA61809.1| Hypothetical protein, partial [Rhipicephalus pulchellus]
Length = 841
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 10 KYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLP-KFKSTGKLKGFAFVEFSTKEEAT 68
K G +L +P +A ++ +FS +G + + LP K + G+ +GF FVEF TK +A
Sbjct: 709 KEGTKILVRNIPFQANQKEVQDLFSVFGTLRGIRLPRKMAAGGRHRGFGFVEFLTKNDAK 768
Query: 69 KALE 72
+A E
Sbjct: 769 RAFE 772
>gi|390438650|ref|ZP_10227098.1| putative RNA-binding protein rbpF [Microcystis sp. T1-4]
gi|389837939|emb|CCI31222.1| putative RNA-binding protein rbpF [Microcystis sp. T1-4]
Length = 97
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
L E + + VF++YG V V +P + TG+ +GFAFVE K + T A+E
Sbjct: 8 LSYEISQEDLTDVFAEYGTVQRVHIPVDRETGRKRGFAFVEMENKAQETAAIE 60
>gi|373459913|ref|ZP_09551680.1| RNP-1 like RNA-binding protein [Caldithrix abyssi DSM 13497]
gi|371721577|gb|EHO43348.1| RNP-1 like RNA-binding protein [Caldithrix abyssi DSM 13497]
Length = 99
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 31/54 (57%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+P + I +F +YG V+ V L + + TG+L+GF FV + +EA A++
Sbjct: 7 NIPKSTDEQTIRDLFEEYGSVSEVKLLRDRYTGELRGFGFVTMESDDEAQNAID 60
>gi|322706738|gb|EFY98318.1| putative translation initiation factor eIF3 subunit [Metarhizium
anisopliae ARSEF 23]
Length = 296
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 30/48 (62%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
AE + +F ++G+VT V L K + TG KGFAF+ F+ + +A KA
Sbjct: 227 AEESELRDMFERFGRVTRVFLAKDRETGMAKGFAFISFADRGDAVKAC 274
>gi|194896665|ref|XP_001978518.1| GG17637 [Drosophila erecta]
gi|195480535|ref|XP_002101294.1| GE17544 [Drosophila yakuba]
gi|190650167|gb|EDV47445.1| GG17637 [Drosophila erecta]
gi|194188818|gb|EDX02402.1| GE17544 [Drosophila yakuba]
Length = 335
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLNPC 78
LP D ++++F KYG + ++ + K TG+ +G AFV ++ +EEA +A+ N
Sbjct: 177 NLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISALNNVI 236
Query: 79 P 79
P
Sbjct: 237 P 237
>gi|448878326|gb|AGE46126.1| arginine/serine-rich splicing factor SC31 transcript IV [Sorghum
bicolor]
Length = 273
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%)
Query: 27 DYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
D + +F +YGKV V +P+ + TG +GFAFV + +EA KA++
Sbjct: 30 DDLYPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAID 75
>gi|448878208|gb|AGE46067.1| arginine/serine-rich splicing factor SC30 transcript VI [Zea
mays]
Length = 270
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%)
Query: 27 DYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
D + +F +YGKV V +P+ + TG +GFAFV + +EA KA++
Sbjct: 30 DDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAID 75
>gi|33860573|ref|NP_892134.1| RNA recognition motif-containing protein [Prochlorococcus marinus
subsp. pastoris str. CCMP1986]
gi|33633515|emb|CAE18472.1| RNA-binding region RNP-1 (RNA recognition motif) [Prochlorococcus
marinus subsp. pastoris str. CCMP1986]
Length = 221
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 33/54 (61%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
LP AE + I +F+ YG+V SLP + TG+ +GFAFVE + + T A++
Sbjct: 28 NLPFRAEREDILELFTPYGEVMNCSLPLERDTGRKRGFAFVEMADEALETSAID 81
>gi|448878320|gb|AGE46123.1| arginine/serine-rich splicing factor SC31 transcript I [Sorghum
bicolor]
Length = 268
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%)
Query: 27 DYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
D + +F +YGKV V +P+ + TG +GFAFV + +EA KA++
Sbjct: 30 DDLYPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAID 75
>gi|443326242|ref|ZP_21054903.1| RRM domain-containing RNA-binding protein [Xenococcus sp. PCC
7305]
gi|442794168|gb|ELS03594.1| RRM domain-containing RNA-binding protein [Xenococcus sp. PCC
7305]
Length = 101
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 32/54 (59%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+P + + + VF+ YG V V LP + +G+++GF FVE + + E KA+E
Sbjct: 7 NIPYKVTEEDLSGVFADYGTVKRVYLPTDRESGRMRGFGFVEMANEAEEDKAIE 60
>gi|359463214|ref|ZP_09251777.1| RNA-binding protein [Acaryochloris sp. CCMEE 5410]
Length = 99
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 31/53 (58%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
L +A + +VF++YG V V +P + TG+ +GFAFVE E KA++
Sbjct: 18 LSFDATEQDLNAVFAEYGTVKQVKMPTDRETGRKRGFAFVEMGNDAEEAKAID 70
>gi|322693671|gb|EFY85523.1| putative translation initiation factor eIF3 subunit [Metarhizium
acridum CQMa 102]
Length = 296
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 30/48 (62%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
AE + +F ++G+VT V L K + TG KGFAF+ F+ + +A KA
Sbjct: 227 AEESELRDMFERFGRVTRVFLAKDRETGMAKGFAFISFADRGDAVKAC 274
>gi|259146662|emb|CAY79919.1| Nsr1p [Saccharomyces cerevisiae EC1118]
Length = 414
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 32/49 (65%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
A+ D I +F+K+G+V V +P T + KGF +V+FS E+A KAL+
Sbjct: 278 ADRDAIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDAKKALD 326
>gi|238006960|gb|ACR34515.1| unknown [Zea mays]
gi|413925185|gb|AFW65117.1| hypothetical protein ZEAMMB73_855473 [Zea mays]
gi|413925186|gb|AFW65118.1| hypothetical protein ZEAMMB73_855473 [Zea mays]
gi|448878198|gb|AGE46062.1| arginine/serine-rich splicing factor SC30 transcript I [Zea mays]
gi|448878204|gb|AGE46065.1| arginine/serine-rich splicing factor SC30 transcript IV [Zea
mays]
Length = 264
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%)
Query: 27 DYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
D + +F +YGKV V +P+ + TG +GFAFV + +EA KA++
Sbjct: 30 DDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAID 75
>gi|190406825|gb|EDV10092.1| nuclear localization sequence binding protein [Saccharomyces
cerevisiae RM11-1a]
gi|207345058|gb|EDZ72003.1| YGR159Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256272028|gb|EEU07041.1| Nsr1p [Saccharomyces cerevisiae JAY291]
gi|323354844|gb|EGA86677.1| Nsr1p [Saccharomyces cerevisiae VL3]
gi|365765431|gb|EHN06939.1| Nsr1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 416
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 32/49 (65%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
A+ D I +F+K+G+V V +P T + KGF +V+FS E+A KAL+
Sbjct: 280 ADRDAIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDAKKALD 328
>gi|151943436|gb|EDN61747.1| nuclear localization sequence binding protein [Saccharomyces
cerevisiae YJM789]
Length = 418
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 32/49 (65%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
A+ D I +F+K+G+V V +P T + KGF +V+FS E+A KAL+
Sbjct: 282 ADRDAIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDAKKALD 330
>gi|120610816|ref|YP_970494.1| RNP-1-like RNA-binding protein [Acidovorax citrulli AAC00-1]
gi|120589280|gb|ABM32720.1| RNP-1-like RNA-binding protein [Acidovorax citrulli AAC00-1]
Length = 116
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 1/97 (1%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLNPC 78
LP + + S F+++G VT + + TG+ KGF FVE S+ E+A A+ GLN
Sbjct: 9 NLPYSVTDESLRSNFAEFGGVTSSKIMTDRETGRSKGFGFVEMSSAEDAQSAI-TGLNGL 67
Query: 79 PTDYQSSILTTTSRLSFGITPLGFESGGWWFKSSHEI 115
D +S ++ P G+ G+ ++
Sbjct: 68 SVDGRSIVVNLARPREANGGPGGYSPVGYAVNKRSDV 104
>gi|134109015|ref|XP_776622.1| hypothetical protein CNBC1150 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50259302|gb|EAL21975.1| hypothetical protein CNBC1150 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 375
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 37/60 (61%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+V++ L +++ +FS+YG++T + LP FK +G KG A +EF T A+KA++
Sbjct: 59 KVIVVSGLSKNVMKGHLDEIFSEYGRITGIDLPLFKVSGLNKGKAAIEFDTPAAASKAVK 118
>gi|400598022|gb|EJP65742.1| eukaryotic translation initiation factor 3 subunit G [Beauveria
bassiana ARSEF 2860]
Length = 296
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 30/48 (62%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
AE + +F ++G+VT V L K + TG KGFAF+ F+ + +A KA
Sbjct: 227 AEEGELRDMFERFGRVTRVFLAKDRDTGMAKGFAFISFADRGDAVKAC 274
>gi|293334639|ref|NP_001169755.1| uncharacterized protein LOC100383636 [Zea mays]
gi|224031469|gb|ACN34810.1| unknown [Zea mays]
gi|414887660|tpg|DAA63674.1| TPA: hypothetical protein ZEAMMB73_707044 [Zea mays]
gi|414887661|tpg|DAA63675.1| TPA: hypothetical protein ZEAMMB73_707044 [Zea mays]
Length = 246
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 29/41 (70%)
Query: 32 VFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+F KYG++ + +P+ + TG +GFAFV + ++EA KA+E
Sbjct: 36 LFDKYGEIVDIYIPRDRRTGDSRGFAFVRYKYEDEAQKAVE 76
>gi|448878200|gb|AGE46063.1| arginine/serine-rich splicing factor SC30 transcript II [Zea
mays]
Length = 254
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%)
Query: 27 DYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
D + +F +YGKV V +P+ + TG +GFAFV + +EA KA++
Sbjct: 30 DDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAID 75
>gi|425472294|ref|ZP_18851145.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC
9701]
gi|389881662|emb|CCI37811.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC
9701]
Length = 97
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 31/52 (59%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
LP E + + + VF +YG++ V P + T + +GFAFVE T E+ KA+
Sbjct: 8 LPFEVDQEDVVEVFKEYGEIKRVHFPMDRETKRKRGFAFVEMETPEQEAKAI 59
>gi|326514938|dbj|BAJ99830.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 638
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 3 ELVENNKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFS 62
+L E K Y R+ + P E D I+SVF +G++ L K +T K KG+ F+E+
Sbjct: 215 QLTEEAKNYNRIYIASIHPDLTETD-IQSVFEAFGEIKSCVLAKDTATSKHKGYGFIEYG 273
Query: 63 TKEEATKAL 71
T + A A+
Sbjct: 274 TVQAAQDAI 282
>gi|297303177|ref|XP_002806144.1| PREDICTED: uncharacterized RNA-binding protein C660.15-like,
partial [Macaca mulatta]
Length = 265
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELG 74
+P + + ++ FS+YG + + K + TGK +GFA+V +ST EEA A+ G
Sbjct: 202 IPSDLDQGRLDQFFSQYGNIVDSVVMKDRITGKPRGFAYVTYSTPEEAQTAINAG 256
>gi|289803032|gb|ADD20766.1| RH41387p [Drosophila melanogaster]
Length = 322
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLNPC 78
LP D ++++F KYG + ++ + K TG+ +G AFV ++ +EEA +A+ N
Sbjct: 185 NLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISALNNVI 244
Query: 79 P 79
P
Sbjct: 245 P 245
>gi|241953799|ref|XP_002419621.1| RNA-binding protein, putative; nucleolar protein, putative [Candida
dubliniensis CD36]
gi|223642961|emb|CAX43217.1| RNA-binding protein, putative [Candida dubliniensis CD36]
Length = 393
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
R++ L + D +E F G++ + + F+ TGK KGFAF++F +E AT AL+
Sbjct: 210 RILFVGNLSFDTTEDLLEEHFKHCGEIVKIRMATFQDTGKCKGFAFIDFKDEEGATTALK 269
Query: 73 LGL 75
L
Sbjct: 270 SKL 272
>gi|260828249|ref|XP_002609076.1| hypothetical protein BRAFLDRAFT_60256 [Branchiostoma floridae]
gi|229294430|gb|EEN65086.1| hypothetical protein BRAFLDRAFT_60256 [Branchiostoma floridae]
Length = 495
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 3 ELVENNKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFS 62
+LVE K Y R+ + + P+ D I+SVF +GK+ L TGK KG+ F+E+
Sbjct: 158 QLVEEAKHYNRIYVSS-VHPDLAADDIKSVFEAFGKIKSCELAPDAVTGKHKGYGFLEYE 216
Query: 63 TKEEATKAL 71
+ A A+
Sbjct: 217 KPQSAQDAI 225
Score = 34.7 bits (78), Expect = 7.9, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 26/50 (52%)
Query: 23 EAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
E D ++ FS +G + + L T K KG+AF+E+ E A ALE
Sbjct: 80 ELREDTLKQAFSPFGPIKNIDLSWDPLTMKHKGYAFIEYEIPEAAQLALE 129
>gi|448878206|gb|AGE46066.1| arginine/serine-rich splicing factor SC30 transcript V [Zea mays]
Length = 262
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%)
Query: 27 DYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
D + +F +YGKV V +P+ + TG +GFAFV + +EA KA++
Sbjct: 30 DDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAID 75
>gi|402225922|gb|EJU05982.1| RNA-binding domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 541
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 27/66 (40%), Positives = 35/66 (53%), Gaps = 7/66 (10%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKA-------LELGLN 76
A+ D + F+ YG V V LP + TG+ KGFA+VEF + AT A LE+G
Sbjct: 398 ADEDALWQTFADYGAVRSVRLPTDRETGQPKGFAYVEFEDQAGATAAFEAGKEGLEIGGR 457
Query: 77 PCPTDY 82
P DY
Sbjct: 458 PVRLDY 463
Score = 37.7 bits (86), Expect = 0.95, Method: Composition-based stats.
Identities = 16/60 (26%), Positives = 36/60 (60%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+ ++ + L + D++++ F + G++ V + + +G+ +GF F++FST + KALE
Sbjct: 288 KTIIVKNLSWNVDDDWLKTEFEECGEIVSVRVQLDRQSGRSRGFGFIDFSTSDAVAKALE 347
>gi|298707925|emb|CBJ30311.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 351
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 6/78 (7%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEA----- 67
R V + LP + + D + + G++ V L + T KLKGF +VEFST+ A
Sbjct: 238 RTVFVKNLPYDVDEDAVSEALAGCGRIASVRLAMWNHTRKLKGFGYVEFSTERGAETCVR 297
Query: 68 -TKALELGLNPCPTDYQS 84
+ L +G P D+++
Sbjct: 298 TQQNLSIGGRPLVVDFET 315
>gi|224032171|gb|ACN35161.1| unknown [Zea mays]
gi|413925183|gb|AFW65115.1| splicing factor, arginine/serine-rich 2 isoform 1 [Zea mays]
gi|413925184|gb|AFW65116.1| splicing factor, arginine/serine-rich 2 isoform 2 [Zea mays]
gi|448878210|gb|AGE46068.1| arginine/serine-rich splicing factor SC30 transcript VII [Zea
mays]
Length = 256
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%)
Query: 27 DYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
D + +F +YGKV V +P+ + TG +GFAFV + +EA KA++
Sbjct: 30 DDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAID 75
>gi|443318092|ref|ZP_21047374.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
6406]
gi|442782317|gb|ELR92375.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
6406]
Length = 108
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 25 EHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
E D E VF +YG V V +P + TG+++GFAFVE S E A+E
Sbjct: 14 EEDLTE-VFKEYGAVKRVQVPVDRETGRMRGFAFVEMSEDAEENAAIE 60
>gi|78706524|ref|NP_001027063.1| Sex lethal, isoform N [Drosophila melanogaster]
gi|78707532|ref|NP_524791.3| Sex lethal, isoform C [Drosophila melanogaster]
gi|22831873|gb|AAN09197.1| Sex lethal, isoform C [Drosophila melanogaster]
gi|71854532|gb|AAZ52510.1| Sex lethal, isoform N [Drosophila melanogaster]
gi|317453674|gb|ADV19045.1| RE22452p [Drosophila melanogaster]
Length = 344
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLNPC 78
LP D ++++F KYG + ++ + K TG+ +G AFV ++ +EEA +A+ N
Sbjct: 207 NLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISALNNVI 266
Query: 79 P 79
P
Sbjct: 267 P 267
>gi|358379816|gb|EHK17495.1| hypothetical protein TRIVIDRAFT_43079, partial [Trichoderma virens
Gv29-8]
Length = 245
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 7/71 (9%)
Query: 9 KKYGRVVLKE-------KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEF 61
KK+G + E LP + + D + F++ VT V LP +G LKGF +V F
Sbjct: 94 KKHGDTLSAESDTLFVGNLPFDTDQDTVTEFFNEVAAVTSVRLPTDPDSGNLKGFGYVTF 153
Query: 62 STKEEATKALE 72
+ E+A ALE
Sbjct: 154 GSVEDAKAALE 164
>gi|345484300|ref|XP_003424998.1| PREDICTED: LOW QUALITY PROTEIN: poly(U)-binding-splicing factor
half pint-like [Nasonia vitripennis]
Length = 605
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 3 ELVENNKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFS 62
E+ E +K Y R+ + E D I+SVF +G +TY L + S + KG+ F+E+
Sbjct: 211 EITEESKHYNRIYIASIHQDLTEED-IKSVFEAFGPITYCKLAQGSSPHRHKGYGFIEYE 269
Query: 63 TKEEATKAL 71
+ + A +A+
Sbjct: 270 SMQSALEAI 278
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 23 EAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
E + D I F +G + +++ +T K KGFAFVE+ E A ALE
Sbjct: 132 ELKEDTIRQAFLPFGPIKSINMSWDPATQKHKGFAFVEYEIPEAAQLALE 181
>gi|308322103|gb|ADO28189.1| eukaryotic translation initiation factor 3 subunit g [Ictalurus
furcatus]
Length = 294
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 33/52 (63%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
LP + ++ +F +G ++ + L K K+TG+ KGFAF+ F +E+A +A+
Sbjct: 220 LPEDTRETDLQELFRPFGSISRIYLAKDKNTGQSKGFAFISFHRREDAARAI 271
>gi|302772180|ref|XP_002969508.1| hypothetical protein SELMODRAFT_440750 [Selaginella moellendorffii]
gi|300162984|gb|EFJ29596.1| hypothetical protein SELMODRAFT_440750 [Selaginella moellendorffii]
Length = 240
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 36/67 (53%)
Query: 1 MAELVENNKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVE 60
+ E E K+ VV ++P D + FS++G VT + L + K TGK K +AFVE
Sbjct: 36 LTEFDEQGKRRSSVVYIGRIPHGFYEDQMRGYFSQFGAVTRLRLSRNKKTGKSKHYAFVE 95
Query: 61 FSTKEEA 67
F T E A
Sbjct: 96 FETPEIA 102
>gi|195657783|gb|ACG48359.1| splicing factor, arginine/serine-rich 2 [Zea mays]
Length = 254
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%)
Query: 27 DYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
D + +F +YGKV V +P+ + TG +GFAFV + +EA KA++
Sbjct: 30 DDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAID 75
>gi|223938031|ref|ZP_03629929.1| RNP-1 like RNA-binding protein [bacterium Ellin514]
gi|223893245|gb|EEF59708.1| RNP-1 like RNA-binding protein [bacterium Ellin514]
Length = 114
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 23 EAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLNPCPTDY 82
+A + ++ +F+++G VT V+L K TG+ +GF FV STKE A A++ N +
Sbjct: 12 DATENDVQDLFAQHGPVTEVNLIMDKMTGRARGFGFVTMSTKEGADAAVQ---NLNGKQW 68
Query: 83 QSSILTTT 90
Q LT
Sbjct: 69 QGRALTVN 76
>gi|282890465|ref|ZP_06298988.1| hypothetical protein pah_c022o030 [Parachlamydia acanthamoebae
str. Hall's coccus]
gi|281499462|gb|EFB41758.1| hypothetical protein pah_c022o030 [Parachlamydia acanthamoebae
str. Hall's coccus]
Length = 113
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 28/45 (62%)
Query: 27 DYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
D + SVF K GKV V + + TGK KGF FVE + E+A KA+
Sbjct: 19 DILRSVFEKIGKVVSVKIITDQYTGKSKGFGFVEMESSEDADKAI 63
>gi|351720720|ref|NP_001236162.1| uncharacterized protein LOC100527187 [Glycine max]
gi|255631742|gb|ACU16238.1| unknown [Glycine max]
Length = 204
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 37/61 (60%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
G ++L + EA+ D +++ F +YG++ + L + TG +KG+A +E+ EEA A+
Sbjct: 97 GWIILVTGVHEEAQEDDLQNAFGEYGEIKNLHLNLDRRTGFVKGYALIEYERAEEARNAI 156
Query: 72 E 72
E
Sbjct: 157 E 157
>gi|428204727|ref|YP_007083316.1| RRM domain-containing RNA-binding protein [Pleurocapsa sp. PCC
7327]
gi|427982159|gb|AFY79759.1| RRM domain-containing RNA-binding protein [Pleurocapsa sp. PCC
7327]
Length = 98
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
L E + + SVF+++G V V LP TG+++GFAFVE T + A+E
Sbjct: 7 NLSYEVTEEALNSVFAEFGSVRRVHLPTDHETGRVRGFAFVEMDTLTQEDSAIE 60
>gi|413925182|gb|AFW65114.1| hypothetical protein ZEAMMB73_855473 [Zea mays]
Length = 268
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%)
Query: 27 DYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
D + +F +YGKV V +P+ + TG +GFAFV + +EA KA++
Sbjct: 30 DDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAID 75
>gi|427718424|ref|YP_007066418.1| RNP-1 like RNA-binding protein [Calothrix sp. PCC 7507]
gi|427350860|gb|AFY33584.1| RNP-1 like RNA-binding protein [Calothrix sp. PCC 7507]
Length = 101
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 28/44 (63%)
Query: 29 IESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
++ F++YG V V LP + TG+ +GFAFVE T + T A+E
Sbjct: 17 LKRAFAEYGTVNRVQLPTDRETGRPRGFAFVEMETDAQETAAIE 60
>gi|78183598|ref|YP_376032.1| RNA-binding region RNP-1 [Synechococcus sp. CC9902]
gi|78167892|gb|ABB24989.1| RNA-binding region RNP-1 [Synechococcus sp. CC9902]
Length = 196
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 32/54 (59%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
LP AE + + +F+++G+V +LP + TG+ +GFAFVE S A+E
Sbjct: 7 NLPFRAEQEDVTELFAQFGEVVNCALPLERDTGRKRGFAFVEMSDDAAEEAAIE 60
>gi|408398205|gb|EKJ77338.1| hypothetical protein FPSE_02416 [Fusarium pseudograminearum
CS3096]
Length = 128
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 26 HDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLNPCPTD 81
D + FS++G+VT + + + TG+ +GF FV FST+E+A A++ LN D
Sbjct: 15 DDTLRQTFSEFGEVTDSIIMRDRETGRARGFGFVTFSTEEQANAAVD-ALNEQELD 69
>gi|385305672|gb|EIF49630.1| polyadenylate-binding protein [Dekkera bruxellensis AWRI1499]
Length = 655
Score = 44.3 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 5/72 (6%)
Query: 1 MAELVENNKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVE 60
M E+++N + V +K PE D + +F YGKVT LP + GK +GF FV
Sbjct: 233 MQEMIKN---FTNVYVK-NFGPEMTEDQLREMFEAYGKVTSTYLPT-DNEGKARGFGFVN 287
Query: 61 FSTKEEATKALE 72
F EA KA++
Sbjct: 288 FEDHXEAAKAVD 299
>gi|281359983|ref|NP_001162688.1| Sex lethal, isoform R [Drosophila melanogaster]
gi|272506011|gb|ACZ95224.1| Sex lethal, isoform R [Drosophila melanogaster]
Length = 342
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLNPC 78
LP D ++++F KYG + ++ + K TG+ +G AFV ++ +EEA +A+ N
Sbjct: 207 NLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISALNNVI 266
Query: 79 P 79
P
Sbjct: 267 P 267
>gi|294882258|ref|XP_002769662.1| Polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
gi|239873262|gb|EER02380.1| Polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
Length = 214
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLNPC 78
LP +++E +FS G + VS+P +GK+KGFAF++F+ ++ A KA+ C
Sbjct: 103 LPFSMTKEWLEQIFSWCGDIERVSIPTDWESGKIKGFAFLDFADEDSAEKAVGKNGEDC 161
>gi|6226164|sp|O61374.2|SXL_CERCA RecName: Full=Sex-lethal homolog; AltName: Full=CCSXL
Length = 348
Score = 44.3 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 35/60 (58%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLNPCP 79
LP D ++++F KYG + ++ + K TGK +G AFV F+ +EEA +A+ N P
Sbjct: 203 LPRTITDDQLDTIFGKYGMIVQKNILRDKLTGKPRGVAFVRFNKREEAQEAISALNNVIP 262
>gi|448878322|gb|AGE46124.1| arginine/serine-rich splicing factor SC31 transcript II [Sorghum
bicolor]
Length = 180
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%)
Query: 27 DYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
D + +F +YGKV V +P+ + TG +GFAFV + +EA KA++
Sbjct: 30 DDLYPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAID 75
>gi|432868303|ref|XP_004071471.1| PREDICTED: uncharacterized protein LOC101174024 [Oryzias latipes]
Length = 273
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Query: 27 DYIESVFSKYGKVTYVSLPKFKSTGKL-KGFAFVEFSTKEEATKAL 71
++I+ +FS YGK+ V +P + L KGFA+VEF T EEA KAL
Sbjct: 141 EHIQEIFSTYGKIKAVDMPVERLFPNLTKGFAYVEFETPEEAQKAL 186
>gi|428221461|ref|YP_007105631.1| RRM domain-containing RNA-binding protein [Synechococcus sp. PCC
7502]
gi|427994801|gb|AFY73496.1| RRM domain-containing RNA-binding protein [Synechococcus sp. PCC
7502]
Length = 101
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 28/43 (65%)
Query: 29 IESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
I ++F++YG V V LP + TG+++GF FVE +T E A+
Sbjct: 17 ISNIFAEYGGVKRVQLPTDRETGRMRGFGFVEMNTDAEEEAAI 59
>gi|345790896|ref|XP_543410.3| PREDICTED: probable RNA-binding protein 19 [Canis lupus familiaris]
Length = 970
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 15 VLKEKLPPEAEHDYIESVFSKYGKVTYVSLPK-FKSTGKLKGFAFVEFSTKEEATKALE 72
+L +P +A+ I+ +FS +G++ V LPK TG +GF FV+F TK++A +A +
Sbjct: 836 ILVRNIPFQADKREIQELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAFQ 894
Score = 38.5 bits (88), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
R+++K LP + D +F+ +G +T SL KF GK + F F+ F ++EEA AL
Sbjct: 3 RLIVK-NLPNGMKEDRFRQLFASFGTLTDCSL-KFTKDGKFRKFGFIGFKSEEEALSAL 59
Score = 34.7 bits (78), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKA 70
GR+ ++ LP + + ++ +FSK+G ++ + P T K KGFAFV F E A +A
Sbjct: 405 GRLFIR-NLPYTSTEEDLQRLFSKFGPLSELHYPIDSLTKKPKGFAFVTFIFPEHAVRA 462
>gi|159026366|emb|CAO88917.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 97
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
++ D +E VF YGKV V +P K T + +GFAFVE K + KA+E
Sbjct: 13 SQEDLVE-VFQDYGKVKRVHIPVDKDTQRKRGFAFVEMEDKAQEAKAIE 60
>gi|448878328|gb|AGE46127.1| arginine/serine-rich splicing factor SC31 transcript V [Sorghum
bicolor]
Length = 185
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%)
Query: 27 DYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
D + +F +YGKV V +P+ + TG +GFAFV + +EA KA++
Sbjct: 30 DDLYPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAID 75
>gi|432091266|gb|ELK24470.1| RNA-binding protein 28 [Myotis davidii]
Length = 762
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 42/63 (66%), Gaps = 2/63 (3%)
Query: 10 KYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATK 69
K R++++ L + D ++++F++YG V V++P+ K GK++GFAFV+F EA K
Sbjct: 112 KKARLIIR-NLSFKCSEDDLKTIFAQYGAVLEVNIPR-KPDGKMRGFAFVQFKNLLEAGK 169
Query: 70 ALE 72
AL+
Sbjct: 170 ALK 172
Score = 39.3 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 33/61 (54%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
G + +LPP A + +E +FS+ G V + K + +GF +V FS +E+ +AL
Sbjct: 3 GLTLFVGRLPPSARSEQLEELFSQVGPVKQCFVVTEKGSKACRGFGYVTFSMREDVQRAL 62
Query: 72 E 72
+
Sbjct: 63 K 63
>gi|427419212|ref|ZP_18909395.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
7375]
gi|425761925|gb|EKV02778.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
7375]
Length = 90
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 27/44 (61%)
Query: 29 IESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+ + F+ YG V V LP + TG+++GF FVE ST E A+E
Sbjct: 17 LTTAFAAYGTVKSVHLPTDRETGRMRGFGFVEMSTDSEEDAAIE 60
>gi|408395744|gb|EKJ74920.1| hypothetical protein FPSE_04956 [Fusarium pseudograminearum CS3096]
Length = 293
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 30/48 (62%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
AE + +F ++G+VT V L K + TG KGFAF+ F+ + +A KA
Sbjct: 224 AEEGELRDMFERFGRVTRVFLAKDRETGMAKGFAFISFADRGDAVKAC 271
>gi|345780008|ref|XP_532435.3| PREDICTED: RNA-binding protein 28 isoform 2 [Canis lupus
familiaris]
Length = 751
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 25/63 (39%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Query: 10 KYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATK 69
K R++++ L + D +++VF +YG V V++P+ K GK++GFAFV+F EA K
Sbjct: 112 KKARLIIR-NLSFKCSEDDLKTVFGQYGAVLEVNIPR-KPDGKMRGFAFVQFKNLLEAGK 169
Query: 70 ALE 72
AL+
Sbjct: 170 ALK 172
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 32/61 (52%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
G + +LPP A + +E +FS+ G + + K + +GF +V FS E+ +AL
Sbjct: 3 GLTLFVSRLPPSARSEQLEELFSQVGPLKQCFVVTEKGSKACRGFGYVTFSMLEDVQRAL 62
Query: 72 E 72
+
Sbjct: 63 K 63
>gi|157822711|ref|NP_001101320.1| RNA-binding protein 28 [Rattus norvegicus]
gi|149065129|gb|EDM15205.1| RNA binding motif protein 28 (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 700
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 35/50 (70%), Gaps = 2/50 (4%)
Query: 27 DYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLN 76
D ++SVF+ YG V V++P+ K GK++GFAF++F EA KAL+ G N
Sbjct: 128 DDLKSVFTHYGTVLEVNIPR-KPDGKMRGFAFIQFKNLLEAGKALK-GAN 175
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+LPP A D +E +FS+ G V + K + +GF +V FS E+ +AL+
Sbjct: 10 RLPPSARSDQLEELFSQVGPVKQCFVVTEKGSKACRGFGYVTFSMLEDVQRALK 63
>gi|294884882|gb|ADF47449.1| TIA1-like protein [Dugesia japonica]
Length = 383
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 32/52 (61%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
+ PE E ++ FS +G+VT + K T K KG+ FV ++TKEEA +AL
Sbjct: 120 IAPEIETQFLRERFSLFGRVTECKIIKDMHTQKPKGYGFVAYATKEEAEEAL 171
>gi|242015830|ref|XP_002428550.1| RNA-binding protein 8A, putative [Pediculus humanus corporis]
gi|212513184|gb|EEB15812.1| RNA-binding protein 8A, putative [Pediculus humanus corporis]
Length = 160
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+ EA+ D I FS++G++ + L + TG LKG+A VE+ T EEA +A E
Sbjct: 71 IHEEAQEDDIHETFSEHGEIKNLHLNLDRRTGYLKGYALVEYETYEEALQAKE 123
>gi|284929607|ref|YP_003422129.1| RRM domain-containing RNA-binding protein [cyanobacterium UCYN-A]
gi|284810051|gb|ADB95748.1| RRM domain-containing RNA-binding protein [cyanobacterium UCYN-A]
Length = 81
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
L EA + +VF +YG+V V LP + TGK++GF FVE T+ + + A++
Sbjct: 8 LSFEATEADVTNVFKEYGEVKKVYLPSDRETGKMRGFGFVEMETENQESAAID 60
>gi|154322853|ref|XP_001560741.1| hypothetical protein BC1G_00769 [Botryotinia fuckeliana B05.10]
gi|347837080|emb|CCD51652.1| similar to polyadenylate-binding protein [Botryotinia fuckeliana]
Length = 790
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 30/55 (54%)
Query: 18 EKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+ +P EA + +F K+G VT SL + TGK +GF FV F E A A++
Sbjct: 247 KNIPVEATEEEFRELFEKFGDVTSASLARDAETGKSRGFGFVNFINHEHAATAVD 301
>gi|30683481|ref|NP_565646.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|106879155|gb|ABF82607.1| At2g27330 [Arabidopsis thaliana]
gi|330252880|gb|AEC07974.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 116
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 29 IESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLNPCPTDYQSSILT 88
+ FS+YG+V V + K + KGFA+V FS+KEEA KAL L LN D + IL
Sbjct: 37 LTQAFSQYGQVLKVDVIMDKIRCRPKGFAYVTFSSKEEAEKAL-LELNAQLVDGRVVILD 95
Query: 89 TT 90
TT
Sbjct: 96 TT 97
>gi|380472220|emb|CCF46890.1| eukaryotic translation initiation factor 3 subunit G
[Colletotrichum higginsianum]
Length = 93
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKA 70
AE + +F ++G+VT V L K + TG KGFAF+ F+ + +A KA
Sbjct: 24 AEEQELRDMFERFGRVTRVFLAKDRETGLAKGFAFISFADRGDAVKA 70
>gi|290996979|ref|XP_002681059.1| RRM domain-containing protein [Naegleria gruberi]
gi|284094682|gb|EFC48315.1| RRM domain-containing protein [Naegleria gruberi]
Length = 285
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 28/53 (52%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
LP AE I +F G++ V +PK K T K KGFAFV+F ALE
Sbjct: 143 LPESAEEQDIRELFETCGEIEEVRMPKDKDTEKKKGFAFVQFRDSSSVKAALE 195
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 26 HDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALEL 73
D I+ SKYG + V++P G+ +G+ FVEF E A K ++L
Sbjct: 64 DDSIKEKLSKYGSIVRVNIP-TDERGRSRGYGFVEFDEVEAAQKVVDL 110
>gi|448123237|ref|XP_004204643.1| Piso0_000503 [Millerozyma farinosa CBS 7064]
gi|448125519|ref|XP_004205201.1| Piso0_000503 [Millerozyma farinosa CBS 7064]
gi|358249834|emb|CCE72900.1| Piso0_000503 [Millerozyma farinosa CBS 7064]
gi|358350182|emb|CCE73461.1| Piso0_000503 [Millerozyma farinosa CBS 7064]
Length = 505
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLN------- 76
A+ D + +F +YG+V +P T + KGF ++EFST +EA ALE LN
Sbjct: 404 AQRDNLYDIFGEYGRVVSCRMPTHPDTQQPKGFGYIEFSTVDEAKAALE-ALNGEYVEGR 462
Query: 77 PCPTDYQS 84
PC D+ +
Sbjct: 463 PCRLDFST 470
>gi|294933049|ref|XP_002780572.1| Heterogeneous nuclear ribonucleoprotein D0, putative [Perkinsus
marinus ATCC 50983]
gi|239890506|gb|EER12367.1| Heterogeneous nuclear ribonucleoprotein D0, putative [Perkinsus
marinus ATCC 50983]
Length = 540
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 35/59 (59%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLNPC 78
LP +++E +FS G + VSLP +GK+KGFAF++F+ ++ A KA+ C
Sbjct: 301 LPFSMTKEWLEQIFSWCGDIERVSLPTDWESGKIKGFAFLDFADEDSAEKAVGKNGEDC 359
Score = 41.6 bits (96), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 31/54 (57%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALEL 73
LP +++ VF G +T +P + TG +GFA+++F T++ A KA +L
Sbjct: 408 LPWSMTQEWLSEVFGDCGSITRCFMPTDRETGNPRGFAYIDFDTEDSAEKATKL 461
>gi|448878202|gb|AGE46064.1| arginine/serine-rich splicing factor SC30 transcript III [Zea mays]
Length = 293
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%)
Query: 27 DYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
D + +F +YGKV V +P+ + TG +GFAFV + +EA KA++
Sbjct: 67 DDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAID 112
>gi|118381772|ref|XP_001024046.1| RNA binding motif protein [Tetrahymena thermophila]
gi|89305813|gb|EAS03801.1| RNA binding motif protein [Tetrahymena thermophila SB210]
Length = 708
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 6 ENNKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKE 65
+ +K GRV+++ L + +++ + KYG++ +++P ST K KGFAFV+F+ K
Sbjct: 22 QAQQKKGRVIIR-NLIFDISEKHLKGLLGKYGEIIEINIPVNPSTNKSKGFAFVQFANKN 80
Query: 66 EATKAL 71
A KA+
Sbjct: 81 CALKAI 86
>gi|222616447|gb|EEE52579.1| hypothetical protein OsJ_34868 [Oryza sativa Japonica Group]
Length = 864
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 32/51 (62%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKA 70
LP + ++ F K+G V V LPK +TG+ +GFAFVEF+ +A+KA
Sbjct: 404 LPRSCRPEDVQVPFQKFGPVRDVYLPKDYNTGEPRGFAFVEFAHSSDASKA 454
>gi|67480907|ref|XP_655803.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|56472962|gb|EAL50415.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|449707557|gb|EMD47202.1| RNA recognition domain containing protein [Entamoeba histolytica
KU27]
Length = 297
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 30/43 (69%)
Query: 32 VFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELG 74
+F+K GKV V++P +++T K +GFA VEF++ KALEL
Sbjct: 131 IFAKCGKVLRVTIPIWRNTNKRRGFAVVEFASLASVEKALELA 173
>gi|357114605|ref|XP_003559089.1| PREDICTED: uncharacterized protein LOC100837927 [Brachypodium
distachyon]
Length = 1019
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 25/55 (45%), Positives = 34/55 (61%)
Query: 23 EAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLNP 77
+A + I SVF + G V V L K T + KGFAFV+F+TKE+ ++AL NP
Sbjct: 521 DAVEEDIRSVFGQVGDVVDVRLHKDLLTNRNKGFAFVKFATKEQVSRALAEMKNP 575
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 36/82 (43%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+ V + LPP + D ++ F YG + V L S+ K F FV FST E A +E
Sbjct: 689 KSVFIDGLPPYWDEDRVKDRFKAYGVIERVVLASNMSSAKRNDFGFVNFSTHEAALACIE 748
Query: 73 LGLNPCPTDYQSSILTTTSRLS 94
N D S + RLS
Sbjct: 749 ATNNTELGDDGKSKVKVRVRLS 770
>gi|302843097|ref|XP_002953091.1| hypothetical protein VOLCADRAFT_63158 [Volvox carteri f.
nagariensis]
gi|300261802|gb|EFJ46013.1| hypothetical protein VOLCADRAFT_63158 [Volvox carteri f.
nagariensis]
Length = 762
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 24/50 (48%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 23 EAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
EA I+ +F+ +G + LPK K G +GFAFVEF TK+EA ALE
Sbjct: 662 EATKKDIQGLFNPFGHLKSCRLPK-KFDGSHRGFAFVEFVTKQEAKNALE 710
>gi|303277453|ref|XP_003058020.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460677|gb|EEH57971.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 930
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 25/50 (50%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 23 EAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
EA I+ +F+ +G + LPK K G +GFAFVE STK EAT ALE
Sbjct: 822 EATKRDIQKLFNPFGALKSCRLPK-KFDGNHRGFAFVELSTKREATSALE 870
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 18 EKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+ +P D + F++ G+VT V + K S GK + AFV F T+ +ATKALE
Sbjct: 41 KNIPKHLTRDRLREHFAERGEVTDVKILK-TSDGKSRCMAFVGFKTEADATKALE 94
>gi|156397171|ref|XP_001637765.1| predicted protein [Nematostella vectensis]
gi|156224880|gb|EDO45702.1| predicted protein [Nematostella vectensis]
Length = 124
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 36/61 (59%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
G ++ + EA+ D I +FS YG++ + + + TG +KG+A VE+ T +EA AL
Sbjct: 37 GWILFVTNIHEEAQEDDIHELFSDYGEIKNLHVNLDRRTGFIKGYALVEYETFKEAQSAL 96
Query: 72 E 72
E
Sbjct: 97 E 97
>gi|405118918|gb|AFR93691.1| rRNA primary transcript binding protein [Cryptococcus neoformans
var. grubii H99]
Length = 752
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 5/73 (6%)
Query: 5 VENNKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFK---STG--KLKGFAFV 59
E +K VL + LP EA + +FS YG++ + LP+ STG +GFAF+
Sbjct: 615 AEGDKTKSTKVLVKNLPFEATKKDVRELFSAYGQLKSLRLPRKAVPTSTGAQSTRGFAFL 674
Query: 60 EFSTKEEATKALE 72
EF+T EA +A+E
Sbjct: 675 EFTTHTEAARAME 687
>gi|224136394|ref|XP_002326849.1| predicted protein [Populus trichocarpa]
gi|222835164|gb|EEE73599.1| predicted protein [Populus trichocarpa]
Length = 343
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 35/67 (52%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLNPCP 79
L +A D + VFS+ G+VT L T K KGFAF+ F+T E+A +A+ NP
Sbjct: 39 LDKDATEDDLRKVFSRVGEVTEARLMMNPQTKKNKGFAFLRFATVEQAKRAVTELKNPVI 98
Query: 80 TDYQSSI 86
Q +
Sbjct: 99 NGKQCGV 105
>gi|195396387|ref|XP_002056813.1| GJ16680 [Drosophila virilis]
gi|194146580|gb|EDW62299.1| GJ16680 [Drosophila virilis]
Length = 915
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 5 VENNKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGK--LKGFAFVEFS 62
V K+ G +L +P +A + + +F +G++T + LPK + G+ +GF FV+F+
Sbjct: 776 VAQKKQTGTKILVRNIPFQAHYREVRDIFKAFGELTSLRLPKKMTPGEDAHRGFGFVDFT 835
Query: 63 TKEEATKALE 72
TK +A +A +
Sbjct: 836 TKADAKRAFD 845
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
R+++K+ LP + D + ++F G +T + L K+ GK + F FV +S++ EA A++
Sbjct: 3 RIIVKQ-LPKQISEDKLRNIFGTKGTITDLQL-KYTPDGKFRQFCFVGYSSEAEAQAAIK 60
Query: 73 LGLNPC 78
N C
Sbjct: 61 HFNNTC 66
>gi|240849591|ref|NP_001155710.1| RNA-binding protein 8A-like [Acyrthosiphon pisum]
gi|239788434|dbj|BAH70900.1| ACYPI007376 [Acyrthosiphon pisum]
Length = 165
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLN 76
L EA+ D + F+++GK+ + L + TG LKG+A VE+ + +EA++A E GLN
Sbjct: 78 LHEEAQEDDLHDKFAEFGKIKNLHLNLDRRTGFLKGYALVEYESYKEASRARE-GLN 133
>gi|443647612|ref|ZP_21129748.1| RNA recognition motiffamily protein [Microcystis aeruginosa
DIANCHI905]
gi|159026368|emb|CAO88919.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443335466|gb|ELS49937.1| RNA recognition motiffamily protein [Microcystis aeruginosa
DIANCHI905]
Length = 97
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
++ D +E VF YGKV V +P K T + +GFAFVE K + KA+E
Sbjct: 13 SQEDLVE-VFQDYGKVKRVHIPVDKDTQRKRGFAFVEMEDKAQEAKAIE 60
>gi|410080926|ref|XP_003958043.1| hypothetical protein KAFR_0F03120 [Kazachstania africana CBS 2517]
gi|372464630|emb|CCF58908.1| hypothetical protein KAFR_0F03120 [Kazachstania africana CBS 2517]
Length = 412
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 32/49 (65%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
A+ D I +FSK+G++ V +P T + KGF +V+++ E+A KAL+
Sbjct: 276 ADRDNISEMFSKFGEIVSVRIPTHPETEQPKGFGYVQYTNVEDAKKALD 324
>gi|357481339|ref|XP_003610955.1| RNA-binding protein 8A [Medicago truncatula]
gi|355512290|gb|AES93913.1| RNA-binding protein 8A [Medicago truncatula]
gi|388501280|gb|AFK38706.1| unknown [Medicago truncatula]
Length = 193
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 36/61 (59%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
G ++L + EA+ D +++ F +YG + + L + TG +KG+A +E+ EEA A+
Sbjct: 89 GWIILVTGVHEEAQDDDLQNAFGEYGDIKNLHLNLDRRTGFVKGYALIEYERSEEARNAI 148
Query: 72 E 72
E
Sbjct: 149 E 149
>gi|302422622|ref|XP_003009141.1| eukaryotic translation initiation factor 3 subunit G [Verticillium
albo-atrum VaMs.102]
gi|261352287|gb|EEY14715.1| eukaryotic translation initiation factor 3 subunit G [Verticillium
albo-atrum VaMs.102]
Length = 297
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 29/48 (60%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
AE + +F ++G+VT V L K + TG KGFAF+ F + +A KA
Sbjct: 228 AEEQELRDMFERFGRVTRVFLAKDRETGMAKGFAFISFVDRSDAVKAC 275
>gi|195353431|ref|XP_002043208.1| Sxl [Drosophila sechellia]
gi|194127306|gb|EDW49349.1| Sxl [Drosophila sechellia]
Length = 301
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 33/53 (62%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
LP D ++++F KYG + ++ + K TG+ +G AFV ++ +EEA +A+
Sbjct: 209 NLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAI 261
>gi|46139099|ref|XP_391240.1| hypothetical protein FG11064.1 [Gibberella zeae PH-1]
Length = 127
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 29 IESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLNPCPTD 81
+ FS++G+VT + + + TG+ +GF FV FST+E+AT A++ LN D
Sbjct: 18 LRQTFSEFGEVTDSIIMRDRDTGRARGFGFVTFSTEEQATAAVD-ALNEQELD 69
>gi|375144786|ref|YP_005007227.1| RNP-1 like RNA-binding protein [Niastella koreensis GR20-10]
gi|361058832|gb|AEV97823.1| RNP-1 like RNA-binding protein [Niastella koreensis GR20-10]
Length = 102
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 23 EAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
+ D + +FS+YG+V+ + + TG+ +GF FVE S+ EEA KA+
Sbjct: 11 QVNDDDLAKLFSQYGQVSSAKVIMDRETGRSRGFGFVEMSSDEEARKAI 59
>gi|357121974|ref|XP_003562691.1| PREDICTED: uncharacterized protein LOC100826320 [Brachypodium
distachyon]
Length = 238
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 29/41 (70%)
Query: 32 VFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+F KYG+V + +P+ + TG +GFAFV + ++EA KA++
Sbjct: 35 LFDKYGEVVDIYIPRDRRTGDSRGFAFVRYKYEDEAQKAVD 75
>gi|346970301|gb|EGY13753.1| eukaryotic translation initiation factor 3 subunit G [Verticillium
dahliae VdLs.17]
Length = 297
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 29/48 (60%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
AE + +F ++G+VT V L K + TG KGFAF+ F + +A KA
Sbjct: 228 AEEQELRDMFERFGRVTRVFLAKDRETGMAKGFAFISFVDRSDAVKAC 275
>gi|302895359|ref|XP_003046560.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256727487|gb|EEU40847.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 296
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 30/48 (62%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
AE + +F ++G+VT V L K + TG KGFAF+ F+ + +A KA
Sbjct: 227 AEEGELRDMFERFGRVTRVFLAKDRETGMAKGFAFISFADRGDAVKAC 274
>gi|57863798|gb|AAS90636.2| unknown protein [Oryza sativa Japonica Group]
Length = 106
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 36/60 (60%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
G +VL + EA+ D + ++F +G+V + L + TG +KG+A +E+ T EEA A+
Sbjct: 12 GWIVLVTGVHEEAQEDDLHNIFRDFGQVKNLHLNLDRRTGFVKGYALIEYETFEEAQAAI 71
>gi|414887662|tpg|DAA63676.1| TPA: hypothetical protein ZEAMMB73_707044 [Zea mays]
Length = 207
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 29/41 (70%)
Query: 32 VFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+F KYG++ + +P+ + TG +GFAFV + ++EA KA+E
Sbjct: 36 LFDKYGEIVDIYIPRDRRTGDSRGFAFVRYKYEDEAQKAVE 76
>gi|442615379|ref|NP_727161.3| Sex lethal, isoform W [Drosophila melanogaster]
gi|324096522|gb|ADY17790.1| RE26226p [Drosophila melanogaster]
gi|440216502|gb|AAF46241.4| Sex lethal, isoform W [Drosophila melanogaster]
Length = 344
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLNPC 78
LP D ++++F KYG + ++ + K TG+ +G AFV ++ +EEA +A+ N
Sbjct: 209 NLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISALNNVI 268
Query: 79 P 79
P
Sbjct: 269 P 269
>gi|406954527|gb|EKD83359.1| RNP-1 like protein RNA-binding protein, partial [uncultured
bacterium]
Length = 95
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTK---EEATKAL 71
LP A + ++++F YG+VT S+ K + TG+ KGF FVE + EEA +AL
Sbjct: 8 LPYSATEEQLKTMFGVYGEVTTASIIKDRDTGRSKGFGFVEMTNDAAAEEAIQAL 62
>gi|226510663|gb|ACO59906.1| eukaryotic translation initiation factor 3 subunit G [Penaeus
monodon]
Length = 292
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 25 EHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALEL 73
E D ++ +F +G ++ + L K K+TG+ KGFAF+ F +E+A KA+++
Sbjct: 223 EQD-LQDLFRPFGDISRIFLAKDKNTGQSKGFAFINFKRREDAAKAIQV 270
>gi|46121373|ref|XP_385241.1| hypothetical protein FG05065.1 [Gibberella zeae PH-1]
Length = 293
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 30/48 (62%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
AE + +F ++G+VT V L K + TG KGFAF+ F+ + +A KA
Sbjct: 224 AEEAELRDMFERFGRVTRVFLAKDRETGMAKGFAFISFADRGDAVKAC 271
>gi|154303176|ref|XP_001551996.1| hypothetical protein BC1G_09608 [Botryotinia fuckeliana B05.10]
Length = 195
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 34/53 (64%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
LP E I ++FS+YG+ TY++L + K TGK KGFAF+++ + A++
Sbjct: 40 LPFELSEGDILTIFSQYGEPTYINLIRDKETGKSKGFAFLKYEDQRSTDLAVD 92
>gi|323301216|gb|ADX35950.1| SD08075p [Drosophila melanogaster]
Length = 322
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLNPC 78
LP D ++++F KYG + ++ + K TG+ +G AFV ++ +EEA +A+ N
Sbjct: 185 NLPRTITDDQLDTIFGKYGPIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISALNNVI 244
Query: 79 P 79
P
Sbjct: 245 P 245
>gi|443328827|ref|ZP_21057420.1| RRM domain-containing RNA-binding protein [Xenococcus sp. PCC
7305]
gi|442791563|gb|ELS01057.1| RRM domain-containing RNA-binding protein [Xenococcus sp. PCC
7305]
Length = 95
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 32/52 (61%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
L E + + VF++YG V V +P + TG+++GFAFVE ++ + KA+
Sbjct: 8 LSYEVNQEDLNEVFTEYGTVKRVHVPTDRETGRVRGFAFVEMESEADEDKAI 59
>gi|340960339|gb|EGS21520.1| eukaryotic translation initiation factor 3 subunit-like protein
[Chaetomium thermophilum var. thermophilum DSM 1495]
Length = 289
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
AE + +F ++G+VT V L K + TG KGFAF+ F+ + +A +A +
Sbjct: 220 AEESELREMFERFGRVTRVFLAKDRETGLAKGFAFISFADRADAVRACQ 268
>gi|317419151|emb|CBN81188.1| RNA-binding protein with serine-rich domain 1, partial
[Dicentrarchus labrax]
Length = 289
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 27 DYIESVFSKYGKVTYVSLPKFKSTGKL-KGFAFVEFSTKEEATKALE 72
++I+ +FS YGK+ + +P + L KG+A+VEF T EEA KAL+
Sbjct: 159 EHIQEIFSTYGKIKMIDMPMNRVHPHLSKGYAYVEFETPEEAEKALK 205
>gi|242035597|ref|XP_002465193.1| hypothetical protein SORBIDRAFT_01g033710 [Sorghum bicolor]
gi|241919047|gb|EER92191.1| hypothetical protein SORBIDRAFT_01g033710 [Sorghum bicolor]
Length = 216
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
Query: 32 VFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLN 76
+F +YG+V + +P+ + TG+ +GFAFV ++ ++EA A++ GL+
Sbjct: 35 LFDRYGEVVDIHIPRDRRTGESRGFAFVRYNYEDEAQDAID-GLD 78
>gi|32482057|gb|AAP84375.1| mutant FCA-D1 [Triticum aestivum]
Length = 284
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 34/59 (57%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLNPC 78
+P A D + +F +G V V+L + + TG+ +G FV+++T EEA +A+ N C
Sbjct: 132 VPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIRALHNQC 190
>gi|68472133|ref|XP_719862.1| hypothetical protein CaO19.6766 [Candida albicans SC5314]
gi|68472368|ref|XP_719745.1| hypothetical protein CaO19.14058 [Candida albicans SC5314]
gi|46441577|gb|EAL00873.1| hypothetical protein CaO19.14058 [Candida albicans SC5314]
gi|46441703|gb|EAL00998.1| hypothetical protein CaO19.6766 [Candida albicans SC5314]
Length = 396
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
R++ L + D +E F G++ + + F+ TGK KGFAF++F +E AT AL+
Sbjct: 215 RILFVGNLSFDTTEDLLEEHFRHCGEIVKIRMATFQDTGKCKGFAFIDFKDEEGATTALK 274
>gi|358368462|dbj|GAA85079.1| eukaryotic translation initiation factor 3 subunit EifCg
[Aspergillus kawachii IFO 4308]
Length = 288
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 32/49 (65%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
AE + +F ++G+VT V L + + T + KGFAF+ F+ +++A +A +
Sbjct: 219 AEEGELRDLFERFGRVTRVFLARDRETQRAKGFAFISFADRDDAARACD 267
>gi|119490270|ref|ZP_01622783.1| RNA binding protein [Lyngbya sp. PCC 8106]
gi|119454156|gb|EAW35309.1| RNA binding protein [Lyngbya sp. PCC 8106]
Length = 105
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%)
Query: 29 IESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
++SVF++YG V V +P + TG+ +GFAFVE + E A+E
Sbjct: 17 LKSVFAEYGTVRRVQIPTDRETGRPRGFAFVEMDSDSEEEAAIE 60
>gi|66816589|ref|XP_642304.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|74997199|sp|Q54Y98.1|TRA2_DICDI RecName: Full=Transformer-2 protein homolog
gi|60470367|gb|EAL68347.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 326
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 32/53 (60%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
L P+ E ++ FS++GK+ +V L + TG+ K F FV F KE+A +A E
Sbjct: 120 LAPQTEERDLKDEFSRFGKIDHVDLIMDRKTGRSKCFGFVYFENKEDAVRAKE 172
>gi|15221187|ref|NP_177563.1| glycine-rich RNA-binding protein 5 [Arabidopsis thaliana]
gi|12324900|gb|AAG52402.1|AC020579_4 putative RNA-binding protein; 37609-36098 [Arabidopsis thaliana]
gi|25083154|gb|AAN72048.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|30023780|gb|AAP13423.1| At1g74230 [Arabidopsis thaliana]
gi|332197447|gb|AEE35568.1| glycine-rich RNA-binding protein 5 [Arabidopsis thaliana]
Length = 289
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 29 IESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALEL 73
+ FSKYG+V + + TG+ +GFAFV F++ EEA+ A++L
Sbjct: 50 LREAFSKYGEVVDAKIIVDRETGRSRGFAFVTFTSTEEASNAMQL 94
>gi|354566345|ref|ZP_08985517.1| RNP-1 like RNA-binding protein [Fischerella sp. JSC-11]
gi|353545361|gb|EHC14812.1| RNP-1 like RNA-binding protein [Fischerella sp. JSC-11]
Length = 98
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFST 63
L + D + +VF++YG V V LP + TG+L+GF FVE T
Sbjct: 7 NLSYDVTEDSLNAVFAEYGTVKRVQLPTDRETGRLRGFGFVEMGT 51
>gi|341900113|gb|EGT56048.1| hypothetical protein CAEBREN_07157 [Caenorhabditis brenneri]
Length = 452
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 31/52 (59%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
LP E D + VF K G+V + + + K T KGFAFV F ++++A +A+
Sbjct: 206 LPQEMNEDELRDVFGKIGRVIRIFIARDKITALPKGFAFVTFESRDDAARAI 257
>gi|51854397|gb|AAU10777.1| unknown protein [Oryza sativa Japonica Group]
Length = 116
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 36/60 (60%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
G +VL + EA+ D + ++F +G+V + L + TG +KG+A +E+ T EEA A+
Sbjct: 12 GWIVLVTGVHEEAQEDDLHNIFRDFGQVKNLHLNLDRRTGFVKGYALIEYETFEEAQAAI 71
>gi|423067018|ref|ZP_17055808.1| RNP-1 like RNA-binding protein [Arthrospira platensis C1]
gi|406711304|gb|EKD06505.1| RNP-1 like RNA-binding protein [Arthrospira platensis C1]
Length = 86
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 29/46 (63%)
Query: 27 DYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
D + VF++YG V +P + TG+ +GF FVE ++E TKA+E
Sbjct: 8 DDLSEVFAQYGTVKRSMIPTDRETGRSRGFGFVEMVNEDEETKAIE 53
>gi|307109776|gb|EFN58013.1| hypothetical protein CHLNCDRAFT_57088 [Chlorella variabilis]
Length = 546
Score = 44.3 bits (103), Expect = 0.011, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 32/61 (52%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
R V LP AE I F K G + + + K+TG+ KGFA++EF KE+ AL
Sbjct: 139 RTVFAYNLPLRAEEKEIFQFFIKAGPLNDIKVITDKTTGRSKGFAYIEFQRKEDVINALA 198
Query: 73 L 73
L
Sbjct: 199 L 199
>gi|426345476|ref|XP_004040437.1| PREDICTED: polyadenylate-binding protein 4-like [Gorilla gorilla
gorilla]
Length = 428
Score = 44.3 bits (103), Expect = 0.011, Method: Composition-based stats.
Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 2 AELVENNKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEF 61
AEL ++ + +K E + + ++ VFSKYGK V + S+GK KGF FV F
Sbjct: 238 AELRSKASEFTNIYIK-NFGGEMDDERLKDVFSKYGKTLSVKVMT-DSSGKSKGFGFVSF 295
Query: 62 STKEEATKALE 72
+ E A KA+E
Sbjct: 296 DSHEAAKKAVE 306
>gi|354466972|ref|XP_003495945.1| PREDICTED: probable RNA-binding protein 19 [Cricetulus griseus]
gi|344237019|gb|EGV93122.1| putative RNA-binding protein 19 [Cricetulus griseus]
Length = 954
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 15 VLKEKLPPEAEHDYIESVFSKYGKVTYVSLPK-FKSTGKLKGFAFVEFSTKEEATKAL 71
+L +P +A I +FS +G++ V LPK TG +GF FV+F TK++A KA
Sbjct: 827 ILVRNIPFQANQREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFVTKQDAKKAF 884
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
R+++K LP + + +F+ +G +T SL KF GK + F F+ F ++EEA AL
Sbjct: 3 RLIVKN-LPNGMKEERFRQLFAAFGTLTDCSL-KFTKDGKFRKFGFIGFKSEEEAQAAL 59
>gi|12835985|dbj|BAB23448.1| unnamed protein product [Mus musculus]
Length = 590
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 15 VLKEKLPPEAEHDYIESVFSKYGKVTYVSLPK-FKSTGKLKGFAFVEFSTKEEATKAL 71
+L +P +A I +FS +G++ V LPK TG +GF FV+F TK++A KA
Sbjct: 464 ILVRNIPFQANQREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKKAF 521
>gi|452843390|gb|EME45325.1| hypothetical protein DOTSEDRAFT_71152 [Dothistroma septosporum
NZE10]
Length = 785
Score = 44.3 bits (103), Expect = 0.011, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 1 MAELVENNKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVE 60
M++ E + + +K + PEA D ++F KYG +T SL GK +GF FV
Sbjct: 226 MSKFEEMKANFTNIYVK-NIDPEATDDEFRALFEKYGDITSASLAH-DQEGKSRGFGFVN 283
Query: 61 FSTKEEATKALE 72
+ E+A KA+E
Sbjct: 284 YIRHEDANKAVE 295
>gi|434407004|ref|YP_007149889.1| RRM domain-containing RNA-binding protein [Cylindrospermum
stagnale PCC 7417]
gi|428261259|gb|AFZ27209.1| RRM domain-containing RNA-binding protein [Cylindrospermum
stagnale PCC 7417]
Length = 104
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 27/42 (64%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEF 61
L E D + +VF++YG V V LP + TG+L+GFAFVE
Sbjct: 8 LSYEVTSDTLSAVFAEYGSVKRVQLPTDRETGRLRGFAFVEM 49
>gi|356497345|ref|XP_003517521.1| PREDICTED: RNA-binding protein 8A-like [Glycine max]
Length = 197
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 37/61 (60%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
G ++L + EA+ D +++ F +YG++ + L + TG +KG+A +E+ EEA A+
Sbjct: 90 GWIILVTGVHEEAQEDDLQNAFGEYGEIKNLHLNLDRRTGFVKGYALIEYERAEEARNAI 149
Query: 72 E 72
E
Sbjct: 150 E 150
>gi|385301669|gb|EIF45843.1| nop13p [Dekkera bruxellensis AWRI1499]
Length = 323
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
R++ LP + D + F G++ + + F+ +GK KGFAF++F +E +KALE
Sbjct: 117 RILFVGNLPFDTTEDQLREQFMHCGEIVKIRMATFEDSGKCKGFAFLDFKDEEGPSKALE 176
>gi|340924295|gb|EGS19198.1| multiple RNA-binding domain-containing protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 832
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
R ++ + LP +A I +F YGK+ V +PK K + +GFAF EF+T +EA AL
Sbjct: 708 RKIVIKNLPFQATKKDIRDLFGTYGKLVAVRVPK-KFNSQSRGFAFAEFATAKEALNAL 765
>gi|213407694|ref|XP_002174618.1| translation initiation factor eIF3g [Schizosaccharomyces japonicus
yFS275]
gi|212002665|gb|EEB08325.1| translation initiation factor eIF3g [Schizosaccharomyces japonicus
yFS275]
Length = 281
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
L + D + +F ++G + V L K K TG+ KGFAFV + +E A KA +
Sbjct: 208 LSDDTREDELRDLFRRFGGIQRVFLAKDKETGRAKGFAFVSYYDRESAVKARD 260
>gi|407920118|gb|EKG13336.1| hypothetical protein MPH_09618 [Macrophomina phaseolina MS6]
Length = 768
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 1 MAELVENNKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVE 60
M++ E + V +K + E D +F KYG++T SL TGK +GF FV
Sbjct: 227 MSKFEEMKANFTNVYVK-NIDLEVTDDEFRELFEKYGQITSASLAHDNETGKSRGFGFVN 285
Query: 61 FSTKEEATKALE 72
F E A KA++
Sbjct: 286 FVKHESAAKAVD 297
>gi|386816934|ref|ZP_10104152.1| RNP-1 like RNA-binding protein [Thiothrix nivea DSM 5205]
gi|386421510|gb|EIJ35345.1| RNP-1 like RNA-binding protein [Thiothrix nivea DSM 5205]
Length = 127
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLN 76
LP + + + +F YG+V+ VS+ K K TG+ KGF FV+ EAT A+ GLN
Sbjct: 7 NLPYKITENELRDLFGAYGEVSSVSMIKDKMTGQSKGFGFVDMPNAGEATAAIN-GLN 63
>gi|361128049|gb|EHL00002.1| putative Polyadenylate-binding protein, cytoplasmic and nuclear
[Glarea lozoyensis 74030]
Length = 783
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 31/55 (56%)
Query: 18 EKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+ +P EA + +F K+G VT SL + + TGK +GF FV F E A A++
Sbjct: 248 KNIPVEATDEEFRELFEKFGDVTSASLARDQDTGKSRGFGFVNFINHEHAATAVD 302
>gi|348521634|ref|XP_003448331.1| PREDICTED: RNA-binding protein 10-like [Oreochromis niloticus]
Length = 945
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 45/72 (62%), Gaps = 2/72 (2%)
Query: 2 AELVENNKKYGRVVLKEKLPPEAEHDYIESVFSKYG-KVTYVSLPKFKSTGKLKGFAFVE 60
AEL ++N++ +++ LPP A + I + + G + V L + KS+G+ +GFAFVE
Sbjct: 215 AEL-DHNQRPSNIIMLRMLPPSATANEIRAQLQEQGIQPREVRLMRNKSSGQSRGFAFVE 273
Query: 61 FSTKEEATKALE 72
F+ +EAT+ +E
Sbjct: 274 FNLIQEATRWME 285
>gi|330935481|ref|XP_003304989.1| hypothetical protein PTT_17723 [Pyrenophora teres f. teres 0-1]
gi|311318179|gb|EFQ86926.1| hypothetical protein PTT_17723 [Pyrenophora teres f. teres 0-1]
Length = 756
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 7/60 (11%)
Query: 29 IESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL------ELGLNPCPTDY 82
++ +F YGKV +V+LPK K G+L+GF FV K+ A +A+ E+G P D+
Sbjct: 166 LQKIFRSYGKVNFVNLPK-KPNGELRGFGFVSLRGKKNAERAIQELNGKEIGERPIAVDW 224
>gi|392332679|ref|XP_003752658.1| PREDICTED: probable RNA-binding protein 19 [Rattus norvegicus]
Length = 846
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 15 VLKEKLPPEAEHDYIESVFSKYGKVTYVSLPK-FKSTGKLKGFAFVEFSTKEEATKA 70
+L +P +A I +FS +G++ V LPK TG +GF FV+F TK++A KA
Sbjct: 720 ILVRNIPFQANQREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKKA 776
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
R+++K LP + D +F+ +G +T SL KF GK + F F+ F ++EEA AL
Sbjct: 3 RLIVK-NLPNGMKEDRFRQLFAAFGTLTDCSL-KFTKEGKFRKFGFIGFKSEEEAQAAL 59
>gi|116071793|ref|ZP_01469061.1| RNA-binding region RNP-1 [Synechococcus sp. BL107]
gi|116065416|gb|EAU71174.1| RNA-binding region RNP-1 [Synechococcus sp. BL107]
Length = 229
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 32/54 (59%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
LP AE + + +F+++G+V +LP + TG+ +GFAFVE S A+E
Sbjct: 37 NLPFRAEQEDVTELFAQFGEVVNCALPLERDTGRKRGFAFVEMSDDAAEEAAIE 90
>gi|449461647|ref|XP_004148553.1| PREDICTED: RNA-binding protein 28-like [Cucumis sativus]
Length = 966
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 39/67 (58%)
Query: 6 ENNKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKE 65
E +K V+ LP +A+ I++ FS G V V +P+ TG KGFAFV+F+ K+
Sbjct: 288 EGSKTQKWKVIVRNLPFKAKEKEIKNTFSSAGFVWDVMMPQNSDTGLSKGFAFVKFTCKQ 347
Query: 66 EATKALE 72
+A A++
Sbjct: 348 DAESAIQ 354
>gi|398016302|ref|XP_003861339.1| poly(A)-binding protein, putative [Leishmania donovani]
gi|322499565|emb|CBZ34638.1| poly(A)-binding protein, putative [Leishmania donovani]
Length = 544
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Query: 9 KKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAT 68
+ +GR + + LP + D + +F +GK+T ++ K + G KGFAFV F ++ A+
Sbjct: 285 QNHGRNLYVKHLPDDITDDRLREIFEPFGKITSCAIMK-EPNGTFKGFAFVCFEDRQHAS 343
Query: 69 KALELGLNPCPTDYQSSIL 87
AL LN P ++ L
Sbjct: 344 AALR-SLNGQPLEHSKKPL 361
>gi|118376506|ref|XP_001021435.1| La domain containing protein [Tetrahymena thermophila]
gi|89303202|gb|EAS01190.1| La domain containing protein [Tetrahymena thermophila SB210]
Length = 2252
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 45/71 (63%), Gaps = 3/71 (4%)
Query: 1 MAELVENNKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVE 60
+ + ++N+K+ R + + LPP+ + S+F + ++ ++LP K++ +GFAF+E
Sbjct: 237 LEQALKNSKQ--RTLYIDFLPPKCSKQTLVSIFGNF-RIININLPLQKNSQLCQGFAFIE 293
Query: 61 FSTKEEATKAL 71
F ++EEA +AL
Sbjct: 294 FFSEEEANQAL 304
>gi|50059467|gb|AAT02209.2| AUF1 similar protein [Paracentrotus lividus]
gi|51872093|gb|AAU12170.1| AUF1-like protein [Paracentrotus lividus]
Length = 361
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 27 DYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKA 70
D I+S FS++G V P+ K+TG+ GFAFV++ T +EA KA
Sbjct: 149 DDIKSYFSQFGTVVETEFPEDKTTGRRLGFAFVKYETSDEAQKA 192
>gi|378755700|gb|EHY65726.1| hypothetical protein NERG_01333 [Nematocida sp. 1 ERTm2]
Length = 316
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%)
Query: 8 NKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEA 67
NK V +P + +HD + + Y +VT + +P+ + TG+ KGFAF T EEA
Sbjct: 183 NKTDDNTVFLGNIPFDVDHDDLLAHLKTYAEVTQIRIPEDRETGRPKGFAFASCETTEEA 242
Query: 68 TKALELGL 75
K + +
Sbjct: 243 RKLINSNI 250
Score = 37.7 bits (86), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
R + + L A D ++ +F ++G++ V +P+ + KGF +VEF +KE K+
Sbjct: 91 RTIFIKGLNFSATEDELKELFGQFGEIVEVRIPRSRDGPGGKGFGYVEFESKEACEKSRS 150
Query: 73 LGLNPCPTDYQSSIL 87
L TDY +
Sbjct: 151 LN----GTDYNGRTI 161
>gi|328859076|gb|EGG08186.1| hypothetical protein MELLADRAFT_35044 [Melampsora larici-populina
98AG31]
Length = 84
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 37/63 (58%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
G V+ + EA + ++ FS YG V +++P + TG +KG+A VE+ T++EA A+
Sbjct: 4 GWVITVTGVHEEATEEDLQDKFSDYGSVMNLAMPLDRRTGYVKGYALVEYETRKEAETAI 63
Query: 72 ELG 74
G
Sbjct: 64 REG 66
>gi|302808913|ref|XP_002986150.1| hypothetical protein SELMODRAFT_182220 [Selaginella moellendorffii]
gi|300146009|gb|EFJ12681.1| hypothetical protein SELMODRAFT_182220 [Selaginella moellendorffii]
Length = 723
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 6/68 (8%)
Query: 11 YGRVVLKEKLPP------EAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTK 64
+G +++ + LP E + + +F + G + + +PK K+TGK GFAF+E+S+
Sbjct: 66 FGSIIVVDNLPVVEPAKYEKLENVVRKIFGQMGIIRTLFMPKDKATGKTAGFAFIEYSSP 125
Query: 65 EEATKALE 72
+EA A E
Sbjct: 126 QEAHTARE 133
>gi|297839301|ref|XP_002887532.1| hypothetical protein ARALYDRAFT_476560 [Arabidopsis lyrata subsp.
lyrata]
gi|297333373|gb|EFH63791.1| hypothetical protein ARALYDRAFT_476560 [Arabidopsis lyrata subsp.
lyrata]
Length = 292
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 29 IESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALEL 73
+ FSKYG+V + + TG+ +GFAFV F++ EEA+ A++L
Sbjct: 50 LREAFSKYGEVVDAKIIVDRETGRSRGFAFVTFTSTEEASNAMQL 94
>gi|78213036|ref|YP_381815.1| RNA recognition motif-containing protein [Synechococcus sp.
CC9605]
gi|260434819|ref|ZP_05788789.1| RNA-binding region RNP-1 [Synechococcus sp. WH 8109]
gi|78197495|gb|ABB35260.1| RNA-binding region RNP-1 (RNA recognition motif) [Synechococcus
sp. CC9605]
gi|260412693|gb|EEX05989.1| RNA-binding region RNP-1 [Synechococcus sp. WH 8109]
Length = 81
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 35/53 (66%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
L +AE + + +F +YG+V+ SLP + TG+ +GFAFV+ S++ + A++
Sbjct: 8 LSWDAEREDLIHLFGQYGEVSKCSLPLDRETGRKRGFAFVDLSSEADEQSAID 60
>gi|255571057|ref|XP_002526479.1| RNA binding protein, putative [Ricinus communis]
gi|223534154|gb|EEF35870.1| RNA binding protein, putative [Ricinus communis]
Length = 784
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 34/58 (58%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLNP 77
L +A D + VF++ G+VT V L T K KGFAF+ FST E+A KA+ NP
Sbjct: 220 LDKDATEDDLRKVFTRVGEVTEVRLMMNPQTKKNKGFAFLRFSTVEQAKKAVTELKNP 277
>gi|209527224|ref|ZP_03275736.1| RNP-1 like RNA-binding protein [Arthrospira maxima CS-328]
gi|376003288|ref|ZP_09781101.1| Glycine-rich RNA-binding protein, rbp-like [Arthrospira sp. PCC
8005]
gi|209492382|gb|EDZ92725.1| RNP-1 like RNA-binding protein [Arthrospira maxima CS-328]
gi|375328318|emb|CCE16854.1| Glycine-rich RNA-binding protein, rbp-like [Arthrospira sp. PCC
8005]
Length = 93
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 29/46 (63%)
Query: 27 DYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
D + VF++YG V +P + TG+ +GF FVE ++E TKA+E
Sbjct: 15 DDLSEVFAQYGTVKRSMIPTDRETGRSRGFGFVEMVNEDEETKAIE 60
>gi|862465|dbj|BAA04177.1| ss-DNA binding protein 12RNP2 precursor [Synechococcus elongatus
PCC 6301]
Length = 100
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 27/38 (71%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEF 61
A + + VF++YG V+ VSLP + TG+L+GFAF+E
Sbjct: 12 ATEEDVREVFAEYGPVSRVSLPVDRETGRLRGFAFIEM 49
>gi|313235941|emb|CBY25084.1| unnamed protein product [Oikopleura dioica]
Length = 465
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 38/69 (55%), Gaps = 5/69 (7%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
GR V LP +A + +E + YGK VS+ K G KG AFVEF++K+EA + +
Sbjct: 346 GRSVFLRNLPFDASQEDLEELVKPYGKAVKVSIVK-NEVGVSKGVAFVEFASKDEADRVV 404
Query: 72 ----ELGLN 76
EL LN
Sbjct: 405 VNTKELSLN 413
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
R++++ LP + +++VF K+G VT V +P K+ GK++GF FV+F+ E+ KA+
Sbjct: 179 RLIIRN-LPWSCTEEKLKNVFHKFGAVTEVKIP-LKADGKMRGFGFVQFTHGHESAKAV 235
>gi|145252642|ref|XP_001397834.1| eukaryotic translation initiation factor 3 subunit G [Aspergillus
niger CBS 513.88]
gi|224488022|sp|A2R7Z2.1|EIF3G_ASPNC RecName: Full=Eukaryotic translation initiation factor 3 subunit G;
Short=eIF3g; AltName: Full=Eukaryotic translation
initiation factor 3 RNA-binding subunit; Short=eIF-3
RNA-binding subunit; AltName: Full=Translation
initiation factor eIF3 p33 subunit homolog; Short=eIF3
p33 homolog
gi|134083387|emb|CAK97380.1| unnamed protein product [Aspergillus niger]
Length = 288
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 31/49 (63%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
AE + +F ++G+VT V L + + T + KGFAF+ F+ + +A +A E
Sbjct: 219 AEEGELRDLFERFGRVTRVFLARDRETQRAKGFAFISFADRSDAARACE 267
>gi|310798289|gb|EFQ33182.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 298
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKA 70
AE + +F ++G+VT V L K + TG KGFAF+ F+ + +A KA
Sbjct: 229 AEEQELRDMFERFGRVTRVFLAKDRETGLAKGFAFISFADRGDAVKA 275
>gi|302818104|ref|XP_002990726.1| hypothetical protein SELMODRAFT_185536 [Selaginella moellendorffii]
gi|300141464|gb|EFJ08175.1| hypothetical protein SELMODRAFT_185536 [Selaginella moellendorffii]
Length = 738
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 23 EAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
EA ++ +FS +G+V V LPK K G +GFAFVEF TK+EA A E
Sbjct: 644 EATRKDLKLLFSPFGQVKKVKLPK-KFDGNHRGFAFVEFVTKQEAQNAFE 692
Score = 35.0 bits (79), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 26/41 (63%)
Query: 31 SVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
S+F +YG+V V + K T + KG+ +V F EEAT+A+
Sbjct: 243 SLFGQYGEVVQVHVICDKETNRSKGYGYVGFMLPEEATRAM 283
>gi|119485430|ref|ZP_01619758.1| RNA-binding region protein [Lyngbya sp. PCC 8106]
gi|119457186|gb|EAW38312.1| RNA-binding region protein [Lyngbya sp. PCC 8106]
Length = 100
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 28/44 (63%)
Query: 29 IESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+ SVF++YG V VS+P + TG+ +GFAFVE + A+E
Sbjct: 17 LRSVFAEYGTVKQVSIPTDRETGRPRGFAFVEMDADTQEQAAIE 60
>gi|119480895|ref|XP_001260476.1| eukaryotic translation initiation factor 3 subunit EifCg, putative
[Neosartorya fischeri NRRL 181]
gi|224488027|sp|A1DGS2.1|EIF3G_NEOFI RecName: Full=Eukaryotic translation initiation factor 3 subunit G;
Short=eIF3g; AltName: Full=Eukaryotic translation
initiation factor 3 RNA-binding subunit; Short=eIF-3
RNA-binding subunit; AltName: Full=Translation
initiation factor eIF3 p33 subunit homolog; Short=eIF3
p33 homolog
gi|119408630|gb|EAW18579.1| eukaryotic translation initiation factor 3 subunit EifCg, putative
[Neosartorya fischeri NRRL 181]
Length = 290
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 31/49 (63%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
AE + +F ++G+VT V L + + T + KGFAF+ F+ + +A +A E
Sbjct: 221 AEESELRDLFERFGRVTRVFLARDRETQRAKGFAFISFADRTDAARACE 269
>gi|425459046|ref|ZP_18838532.1| putative RNA-binding protein rbpA [Microcystis aeruginosa PCC
9808]
gi|440754722|ref|ZP_20933924.1| RNA recognition motif family protein [Microcystis aeruginosa
TAIHU98]
gi|389823286|emb|CCI28617.1| putative RNA-binding protein rbpA [Microcystis aeruginosa PCC
9808]
gi|440174928|gb|ELP54297.1| RNA recognition motif family protein [Microcystis aeruginosa
TAIHU98]
Length = 97
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
++ D +E VF YGKV V +P K T + +GFAFVE K + KA+E
Sbjct: 13 SQEDLVE-VFQDYGKVKRVHIPVDKETQRKRGFAFVEMEDKAQEAKAIE 60
>gi|449707231|gb|EMD46930.1| RNA recognition domain containing protein [Entamoeba histolytica
KU27]
Length = 685
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Query: 5 VENNKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTK 64
+E +K ++++K +P E + +F YG + V LPK K G+ KGFAFVE++TK
Sbjct: 597 IEEHKVSNKLLVKN-VPFETNIKEVRELFRTYGTLRGVRLPK-KVDGQNKGFAFVEYATK 654
Query: 65 EEATKAL 71
+EA A+
Sbjct: 655 QEAANAM 661
Score = 38.5 bits (88), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKA 70
GR+ + LP D I F ++G + + LP K T K KGF FV F ++A KA
Sbjct: 187 GRIYITN-LPFNCTEDDIRKEFDRFGNIAEIHLPIDKITKKSKGFGFVLFVVPQDAVKA 244
Score = 34.7 bits (78), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 27 DYIESVFSKYGKVTYVSLPKFKS--TGKLKGFAFVEFSTKEEATKAL 71
D I VF K G+V ++L K K K GF FVE++ E+A A+
Sbjct: 518 DVIRKVFEKCGRVLAITLSKTKDKKVEKNSGFGFVEYAKHEDAINAI 564
>gi|440295453|gb|ELP88366.1| multiple RNA-binding domain containing protein, putative [Entamoeba
invadens IP1]
Length = 685
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
GR+++ LP + F K+G++T V LP K +GK KGFAFV + ++A KA
Sbjct: 213 GRILVN-NLPYACSEQDVREAFEKFGEITEVHLPIDKVSGKTKGFAFVMYVVPQDAVKAF 271
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 15 VLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEE 66
+L + LP E + + +F YG + V +PK K G+LKG+AF+E++TK+E
Sbjct: 606 LLVKNLPFETNLNEVRELFRVYGTLRGVRVPK-KIDGQLKGYAFIEYATKQE 656
>gi|169783568|ref|XP_001826246.1| eukaryotic translation initiation factor 3 subunit G [Aspergillus
oryzae RIB40]
gi|238493393|ref|XP_002377933.1| eukaryotic translation initiation factor 3 subunit EifCg, putative
[Aspergillus flavus NRRL3357]
gi|121932995|sp|Q2U002.1|EIF3G_ASPOR RecName: Full=Eukaryotic translation initiation factor 3 subunit G;
Short=eIF3g; AltName: Full=Eukaryotic translation
initiation factor 3 RNA-binding subunit; Short=eIF-3
RNA-binding subunit; AltName: Full=Translation
initiation factor eIF3 p33 subunit homolog; Short=eIF3
p33 homolog
gi|83774990|dbj|BAE65113.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220696427|gb|EED52769.1| eukaryotic translation initiation factor 3 subunit EifCg, putative
[Aspergillus flavus NRRL3357]
gi|391869039|gb|EIT78246.1| translation initiation factor 3, subunit g [Aspergillus oryzae
3.042]
Length = 287
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 31/49 (63%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
AE + +F ++G+VT V L + + T + KGFAF+ F+ + +A +A E
Sbjct: 218 AEEGELRDLFERFGRVTRVFLARDRETQRAKGFAFISFADRSDAARACE 266
>gi|407039238|gb|EKE39532.1| RNA recognition motif domain containing protein [Entamoeba nuttalli
P19]
Length = 697
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Query: 5 VENNKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTK 64
+E +K ++++K +P E + +F YG + V LPK K G+ KGFAFVE++TK
Sbjct: 609 IEEHKVSNKLLVKN-VPFETNIKEVRELFRTYGTLRGVRLPK-KVDGQNKGFAFVEYATK 666
Query: 65 EEATKAL 71
+EA A+
Sbjct: 667 QEAANAM 673
Score = 38.1 bits (87), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKA 70
GR+ + LP D I F ++G + + LP K T K KGF FV F ++A KA
Sbjct: 186 GRIYITN-LPFNCTEDDIRKEFDRFGNIAEIHLPIDKITKKSKGFGFVLFVVPQDAVKA 243
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 27 DYIESVFSKYGKVTYVSLPKFKS--TGKLKGFAFVEFSTKEEATKAL 71
D I VF K G+V V+L K K K GF FVE++ E+A A+
Sbjct: 530 DVIRKVFEKCGRVLAVTLSKTKDKKVEKNSGFGFVEYAKHEDAINAI 576
>gi|167382576|ref|XP_001736171.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165901525|gb|EDR27604.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 697
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Query: 5 VENNKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTK 64
+E +K ++++K +P E + +F YG + V LPK K G+ KGFAFVE++TK
Sbjct: 609 IEEHKVSNKLLVK-NVPFETNIKEVRELFRTYGTLRGVRLPK-KVDGQNKGFAFVEYATK 666
Query: 65 EEATKAL 71
+EA A+
Sbjct: 667 QEAANAM 673
Score = 38.1 bits (87), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKA 70
GR+ + LP D I F ++G + + LP K T K KGF FV F ++A KA
Sbjct: 186 GRIYIT-NLPFNCTEDDIRKEFDRFGNIAEIHLPIDKITKKSKGFGFVLFVVPQDAVKA 243
Score = 35.4 bits (80), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 27 DYIESVFSKYGKVTYVSLPKFKS--TGKLKGFAFVEFSTKEEATKAL 71
D I VF K G+V V+L K K K GF FVE++ E+A A+
Sbjct: 530 DVIRKVFEKCGRVLAVTLSKTKDKKVEKNSGFGFVEYARHEDAINAI 576
>gi|392352553|ref|XP_003751242.1| PREDICTED: probable RNA-binding protein 19 [Rattus norvegicus]
Length = 955
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 15 VLKEKLPPEAEHDYIESVFSKYGKVTYVSLPK-FKSTGKLKGFAFVEFSTKEEATKAL 71
+L +P +A I +FS +G++ V LPK TG +GF FV+F TK++A KA
Sbjct: 829 ILVRNIPFQANQREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKKAF 886
Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
R+++K LP + D +F+ +G +T SL KF GK + F F+ F ++EEA AL
Sbjct: 3 RLIVK-NLPNGMKEDRFRQLFAAFGTLTDCSL-KFTKEGKFRKFGFIGFKSEEEAQAAL 59
>gi|324509105|gb|ADY43836.1| Polyadenylate-binding protein 1, partial [Ascaris suum]
Length = 661
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 1 MAELVENNKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVE 60
M E+ E +++ V +K E + + +E +F+K+GK+T ++ + GK KGF FV
Sbjct: 189 MREMGETARRFTNVFIK-NFADELDKEKLEKLFAKFGKITSCAVMS-DADGKSKGFGFVA 246
Query: 61 FSTKEEATKAL 71
F E+A KA+
Sbjct: 247 FENPEDAEKAV 257
Score = 34.7 bits (78), Expect = 8.2, Method: Composition-based stats.
Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Query: 5 VENNKKYGRVVLKEK-LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFST 63
VE ++Y V L K L + + + F YGK+T + G+ KGF FV F
Sbjct: 296 VERMQRYQGVNLYVKNLDDTVDDEVLRQNFESYGKITSAKV-MCDDNGRSKGFGFVCFEK 354
Query: 64 KEEATKAL 71
+EATKA+
Sbjct: 355 PDEATKAV 362
>gi|350633722|gb|EHA22087.1| hypothetical protein ASPNIDRAFT_126136 [Aspergillus niger ATCC
1015]
Length = 281
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 31/49 (63%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
AE + +F ++G+VT V L + + T + KGFAF+ F+ + +A +A E
Sbjct: 212 AEEGELRDLFERFGRVTRVFLARDRETQRAKGFAFISFADRSDAARACE 260
>gi|225448281|ref|XP_002274860.1| PREDICTED: uncharacterized protein LOC100242306 [Vitis vinifera]
gi|296086805|emb|CBI32954.3| unnamed protein product [Vitis vinifera]
Length = 255
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 28/40 (70%)
Query: 33 FSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
F KYGKV + +P+ + TG+ +GFAFV + +EA KA++
Sbjct: 36 FDKYGKVVDIFIPRDRRTGESRGFAFVRYKYADEAQKAVD 75
>gi|448520030|ref|XP_003868205.1| hypothetical protein CORT_0B10690 [Candida orthopsilosis Co 90-125]
gi|380352544|emb|CCG22770.1| hypothetical protein CORT_0B10690 [Candida orthopsilosis]
Length = 498
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 34/67 (50%), Gaps = 6/67 (8%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE------LGLNP 77
A D + VF +YG V LP T + KGF +V+FS+ +EA ALE L P
Sbjct: 368 ANRDKLFEVFGEYGNVISCRLPTHPDTQQPKGFGYVQFSSVDEAKAALEALNGEYLEGRP 427
Query: 78 CPTDYQS 84
C D+ +
Sbjct: 428 CRLDFSA 434
>gi|67479353|ref|XP_655058.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|56472162|gb|EAL49670.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
Length = 685
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Query: 5 VENNKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTK 64
+E +K ++++K +P E + +F YG + V LPK K G+ KGFAFVE++TK
Sbjct: 597 IEEHKVSNKLLVKN-VPFETNIKEVRELFRTYGTLRGVRLPK-KVDGQNKGFAFVEYATK 654
Query: 65 EEATKAL 71
+EA A+
Sbjct: 655 QEAANAM 661
Score = 38.5 bits (88), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKA 70
GR+ + LP D I F ++G + + LP K T K KGF FV F ++A KA
Sbjct: 187 GRIYITN-LPFNCTEDDIRKEFDRFGNIAEIHLPIDKITKKSKGFGFVLFVVPQDAVKA 244
Score = 34.7 bits (78), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 27 DYIESVFSKYGKVTYVSLPKFKS--TGKLKGFAFVEFSTKEEATKAL 71
D I VF K G+V ++L K K K GF FVE++ E+A A+
Sbjct: 518 DVIRKVFEKCGRVLAITLSKTKDKKVEKNSGFGFVEYAKHEDAINAI 564
>gi|242786497|ref|XP_002480817.1| pre-mRNA splicing factor (Prp24), putative [Talaromyces stipitatus
ATCC 10500]
gi|218720964|gb|EED20383.1| pre-mRNA splicing factor (Prp24), putative [Talaromyces stipitatus
ATCC 10500]
Length = 1268
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 23 EAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALEL 73
+A + ++ +FS+YG + V +P K G+ +GF F+ FS KEEAT AL +
Sbjct: 1006 DARENDLKELFSRYGTIETVRIPS-KVNGEHRGFGFIVFSKKEEATAALAM 1055
Score = 38.1 bits (87), Expect = 0.71, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
G V PP A+ +I S+FS G++ V P K + F +V+F + +EA A
Sbjct: 904 GSTVYVTNFPPTADEAFIRSLFSVAGEIIEVRFPSLKYNTHRR-FCYVQFKSADEAIAAT 962
Query: 72 EL 73
+L
Sbjct: 963 KL 964
>gi|146088402|ref|XP_001466041.1| putative poly(A)-binding protein 3 [Leishmania infantum JPCM5]
gi|134070143|emb|CAM68476.1| putative poly(A)-binding protein 3 [Leishmania infantum JPCM5]
Length = 544
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Query: 9 KKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAT 68
+ +GR + + LP + D + +F +GK+T ++ K + G KGFAFV F ++ A+
Sbjct: 285 QNHGRNLYVKHLPDDITDDKLREIFEPFGKITSCAIMK-EPNGTFKGFAFVCFEDRQHAS 343
Query: 69 KALELGLNPCPTDYQSSIL 87
AL LN P ++ L
Sbjct: 344 AALR-SLNGQPLEHSKKPL 361
>gi|30794154|ref|NP_083038.1| probable RNA-binding protein 19 [Mus musculus]
gi|73621449|sp|Q8R3C6.1|RBM19_MOUSE RecName: Full=Probable RNA-binding protein 19; AltName:
Full=RNA-binding motif protein 19
gi|19343654|gb|AAH25619.1| RNA binding motif protein 19 [Mus musculus]
gi|21707580|gb|AAH34010.1| RNA binding motif protein 19 [Mus musculus]
gi|148687830|gb|EDL19777.1| RNA binding motif protein 19 [Mus musculus]
Length = 952
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 15 VLKEKLPPEAEHDYIESVFSKYGKVTYVSLPK-FKSTGKLKGFAFVEFSTKEEATKAL 71
+L +P +A I +FS +G++ V LPK TG +GF FV+F TK++A KA
Sbjct: 826 ILVRNIPFQANQREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKKAF 883
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
R+++K LP + + +F+ +G +T SL KF GK + F F+ F ++EEA AL
Sbjct: 3 RLIVK-NLPNGMKEERFRQLFAAFGTLTDCSL-KFTKDGKFRKFGFIGFKSEEEAQAAL 59
>gi|71029064|ref|XP_764175.1| hypothetical protein [Theileria parva strain Muguga]
gi|68351129|gb|EAN31892.1| hypothetical protein TP04_0540 [Theileria parva]
Length = 486
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 29/54 (53%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+L P + I +FS +G + + LP T K+KGF FVE+ KE A AL
Sbjct: 167 QLDPSCTIEDIRVIFSSFGDILNIDLPTEPDTNKVKGFCFVEYRKKESADLALN 220
>gi|440292389|gb|ELP85594.1| RNA-binding protein, putative [Entamoeba invadens IP1]
Length = 375
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
G V+ +L PE + + F +GKV V + TG+ KGFAF++FS+ E+ +A+
Sbjct: 99 GLVIYIGQLKPETNEETLRQFFEPFGKVVSVDIMHRPGTGECKGFAFLKFSSLEDGNRAI 158
>gi|444321552|ref|XP_004181432.1| hypothetical protein TBLA_0F03780 [Tetrapisispora blattae CBS 6284]
gi|387514476|emb|CCH61913.1| hypothetical protein TBLA_0F03780 [Tetrapisispora blattae CBS 6284]
Length = 577
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 32/86 (37%), Positives = 48/86 (55%), Gaps = 5/86 (5%)
Query: 2 AELVENNKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEF 61
++L E + V +K L EA + E++F YG +T V+L K + GK +GF FV+F
Sbjct: 214 SKLDEARANFTNVYVK-NLDLEATEEDFENLFKPYGTITSVALEK-DAEGKSRGFGFVDF 271
Query: 62 STKEEATKALELGLNPCPTDYQSSIL 87
E+A KA+E LN T+Y+ L
Sbjct: 272 ENHEDAVKAVE-ALN--DTEYKGQTL 294
Score = 35.0 bits (79), Expect = 5.9, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 2 AELVENNKKY-GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVE 60
A +E KY G + + L + + ++ F+ +G +T + + ++ GK KGF FV
Sbjct: 315 ASKLEKLAKYQGINLFIKNLDDSIDDEKLKEEFAPFGTITSARVMRTEN-GKSKGFGFVC 373
Query: 61 FSTKEEATKAL 71
FST EEAT+A+
Sbjct: 374 FSTPEEATRAI 384
>gi|255578218|ref|XP_002529977.1| nucleolar phosphoprotein, putative [Ricinus communis]
gi|223530539|gb|EEF32420.1| nucleolar phosphoprotein, putative [Ricinus communis]
Length = 557
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 34/62 (54%)
Query: 11 YGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKA 70
+G V LP +A D + + G + + L K K TG+ KGFAFV F +KE A KA
Sbjct: 107 HGSEVFIGGLPKDALEDDLRDLCEPIGDIFEIRLMKDKDTGESKGFAFVAFRSKEVAQKA 166
Query: 71 LE 72
+E
Sbjct: 167 IE 168
>gi|71001278|ref|XP_755320.1| eukaryotic translation initiation factor 3 subunit EifCg, putative
[Aspergillus fumigatus Af293]
gi|74675609|sp|Q4X1I3.1|EIF3G_ASPFU RecName: Full=Eukaryotic translation initiation factor 3 subunit G;
Short=eIF3g; AltName: Full=Eukaryotic translation
initiation factor 3 RNA-binding subunit; Short=eIF-3
RNA-binding subunit; AltName: Full=Translation
initiation factor eIF3 p33 subunit homolog; Short=eIF3
p33 homolog
gi|224488021|sp|B0XS28.1|EIF3G_ASPFC RecName: Full=Eukaryotic translation initiation factor 3 subunit G;
Short=eIF3g; AltName: Full=Eukaryotic translation
initiation factor 3 RNA-binding subunit; Short=eIF-3
RNA-binding subunit; AltName: Full=Translation
initiation factor eIF3 p33 subunit homolog; Short=eIF3
p33 homolog
gi|66852958|gb|EAL93282.1| eukaryotic translation initiation factor 3 subunit EifCg, putative
[Aspergillus fumigatus Af293]
gi|159129400|gb|EDP54514.1| eukaryotic translation initiation factor 3 subunit EifCg, putative
[Aspergillus fumigatus A1163]
Length = 290
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 31/49 (63%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
AE + +F ++G+VT V L + + T + KGFAF+ F+ + +A +A E
Sbjct: 221 AEESELRDLFERFGRVTRVFLARDRETQRAKGFAFISFADRTDAARACE 269
>gi|407005316|gb|EKE21467.1| RNA-binding protein, partial [uncultured bacterium]
Length = 76
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 32/54 (59%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALEL 73
LP + + +F++ G V + K+TG+ KGF FVE S EEATKA+E+
Sbjct: 10 LPYTLKDADLNQLFAQAGAVESAVIINDKATGRSKGFGFVEMSADEEATKAIEM 63
>gi|207340299|gb|EDZ68693.1| YPR112Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256269058|gb|EEU04395.1| Mrd1p [Saccharomyces cerevisiae JAY291]
Length = 887
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 2/67 (2%)
Query: 6 ENNKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKE 65
++NKK G++++K LP EA + +F+ +G++ V +PK K +GFAFVEF +
Sbjct: 757 KSNKKSGKIIVK-NLPFEATRKDVFELFNSFGQLKSVRVPK-KFDKSARGFAFVEFLLPK 814
Query: 66 EATKALE 72
EA A++
Sbjct: 815 EAENAMD 821
Score = 34.7 bits (78), Expect = 8.1, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 5 VENNKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTK 64
+E + GR+ L+ L E D+ +FS +G++ V + TG+ KGFA+V F
Sbjct: 338 IEKINQTGRLFLRNILYTSKEEDF-RKLFSPFGELEEVHVALDTRTGQSKGFAYVLFKDP 396
Query: 65 EEATKA 70
+ A A
Sbjct: 397 KNAVNA 402
>gi|6325369|ref|NP_015437.1| Mrd1p [Saccharomyces cerevisiae S288c]
gi|74676381|sp|Q06106.1|MRD1_YEAST RecName: Full=Multiple RNA-binding domain-containing protein 1
gi|914983|gb|AAB68082.1| Ypr112cp [Saccharomyces cerevisiae]
gi|285815635|tpg|DAA11527.1| TPA: Mrd1p [Saccharomyces cerevisiae S288c]
gi|392296115|gb|EIW07218.1| Mrd1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 887
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 2/67 (2%)
Query: 6 ENNKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKE 65
++NKK G++++K LP EA + +F+ +G++ V +PK K +GFAFVEF +
Sbjct: 757 KSNKKSGKIIVK-NLPFEATRKDVFELFNSFGQLKSVRVPK-KFDKSARGFAFVEFLLPK 814
Query: 66 EATKALE 72
EA A++
Sbjct: 815 EAENAMD 821
Score = 34.7 bits (78), Expect = 6.6, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 5 VENNKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTK 64
+E + GR+ L+ L E D+ +FS +G++ V + TG+ KGFA+V F
Sbjct: 338 IEKINQTGRLFLRNILYTSKEEDF-RKLFSPFGELEEVHVALDTRTGQSKGFAYVLFKDS 396
Query: 65 EEATKA 70
+ A A
Sbjct: 397 KNAVNA 402
>gi|323350239|gb|EGA84386.1| Mrd1p [Saccharomyces cerevisiae VL3]
Length = 887
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 2/67 (2%)
Query: 6 ENNKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKE 65
++NKK G++++K LP EA + +F+ +G++ V +PK K +GFAFVEF +
Sbjct: 757 KSNKKSGKIIVK-NLPFEATRKDVFELFNSFGQLKSVRVPK-KFDKSARGFAFVEFLLPK 814
Query: 66 EATKALE 72
EA A++
Sbjct: 815 EAENAMD 821
Score = 34.7 bits (78), Expect = 8.3, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 5 VENNKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTK 64
+E + GR+ L+ L E D+ +FS +G++ V + TG+ KGFA+V F
Sbjct: 338 IEKINQTGRLFLRNILYTSKEEDF-RKLFSPFGELEEVHVALDTRTGQSKGFAYVLFKDP 396
Query: 65 EEATKA 70
+ A A
Sbjct: 397 KNAVNA 402
>gi|71018821|ref|XP_759641.1| hypothetical protein UM03494.1 [Ustilago maydis 521]
gi|74701642|sp|Q4P8R9.1|PABP_USTMA RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|46099399|gb|EAK84632.1| hypothetical protein UM03494.1 [Ustilago maydis 521]
Length = 651
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 15 VLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
V + + PE D E +F+K+GK+T L + GK KGF FV F EA KA++
Sbjct: 229 VYAKNVDPEVTDDEFEKLFTKFGKITSCVLQR-DEDGKSKGFGFVNFEDHNEAQKAVD 285
>gi|83032218|gb|ABB97027.1| unknown [Brassica rapa]
Length = 208
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 29 IESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALEL 73
+ FSKYG+V + + TG+ +GFAFV F++ EEA+ A++L
Sbjct: 50 LREAFSKYGEVVDAKIIVDRETGRSRGFAFVTFTSTEEASNAMQL 94
>gi|349581915|dbj|GAA27072.1| K7_Mrd1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 887
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 2/67 (2%)
Query: 6 ENNKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKE 65
++NKK G++++K LP EA + +F+ +G++ V +PK K +GFAFVEF +
Sbjct: 757 KSNKKSGKIIVK-NLPFEATRKDVFELFNSFGQLKSVRVPK-KFDKSARGFAFVEFLLPK 814
Query: 66 EATKALE 72
EA A++
Sbjct: 815 EAENAMD 821
Score = 34.7 bits (78), Expect = 8.3, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 5 VENNKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTK 64
+E + GR+ L+ L E D+ +FS +G++ V + TG+ KGFA+V F
Sbjct: 338 IEKINQTGRLFLRNILYTSKEEDF-RKLFSPFGELEEVHVALDTRTGQSKGFAYVLFKDP 396
Query: 65 EEATKA 70
+ A A
Sbjct: 397 KNAVNA 402
>gi|190408039|gb|EDV11304.1| multiple RNA-binding domain-containing protein 1 [Saccharomyces
cerevisiae RM11-1a]
Length = 887
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 2/67 (2%)
Query: 6 ENNKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKE 65
++NKK G++++K LP EA + +F+ +G++ V +PK K +GFAFVEF +
Sbjct: 757 KSNKKSGKIIVK-NLPFEATRKDVFELFNSFGQLKSVRVPK-KFDKSARGFAFVEFLLPK 814
Query: 66 EATKALE 72
EA A++
Sbjct: 815 EAENAMD 821
Score = 34.7 bits (78), Expect = 8.2, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 5 VENNKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTK 64
+E + GR+ L+ L E D+ +FS +G++ V + TG+ KGFA+V F
Sbjct: 338 IEKINQTGRLFLRNILYTSKEEDF-RKLFSPFGELEEVHVALDTRTGQSKGFAYVLFKDP 396
Query: 65 EEATKA 70
+ A A
Sbjct: 397 KNAVNA 402
>gi|241147227|ref|XP_002405304.1| RNA binding motif protein, putative [Ixodes scapularis]
gi|215493703|gb|EEC03344.1| RNA binding motif protein, putative [Ixodes scapularis]
Length = 597
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 15 VLKEKLPPEAEHDYIESVFSKYGKVTYVSLPK-FKSTGKLKGFAFVEFSTKEEATKALE 72
+L +P EA ++ +FS +G + + LPK TG+ +GFAFV+F TK +A +A +
Sbjct: 499 ILVRNIPFEATKKELQELFSVFGTLRDIRLPKKMAGTGRHRGFAFVDFLTKNDAKRAFQ 557
>gi|168037614|ref|XP_001771298.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677387|gb|EDQ63858.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 199
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 38/61 (62%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
G ++L + EA+ D + FS++G++ + L + TG +KG+A +E+ TK+EA A+
Sbjct: 108 GWIILVTGVHEEAQEDDLHEAFSEFGEIKNLHLNLDRRTGFVKGYALIEYETKKEAQAAI 167
Query: 72 E 72
+
Sbjct: 168 D 168
>gi|151942889|gb|EDN61235.1| multiple RNA-binding domain containing protein [Saccharomyces
cerevisiae YJM789]
Length = 887
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 2/67 (2%)
Query: 6 ENNKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKE 65
++NKK G++++K LP EA + +F+ +G++ V +PK K +GFAFVEF +
Sbjct: 757 KSNKKSGKIIVK-NLPFEATRKDVFELFNSFGQLKSVRVPK-KFDKSARGFAFVEFLLPK 814
Query: 66 EATKALE 72
EA A++
Sbjct: 815 EAENAMD 821
Score = 34.7 bits (78), Expect = 8.3, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 5 VENNKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTK 64
+E + GR+ L+ L E D+ +FS +G++ V + TG+ KGFA+V F
Sbjct: 338 IEKINQTGRLFLRNILYTSKEEDF-RKLFSPFGELEEVHVALDTRTGQSKGFAYVLFKDP 396
Query: 65 EEATKA 70
+ A A
Sbjct: 397 KNAVNA 402
>gi|51860098|gb|AAU11302.1| RNA-binding protein AUF1 [Paracentrotus lividus]
Length = 296
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 27 DYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKA 70
D I+S FS++G V P+ K+TG+ GFAFV++ T +EA KA
Sbjct: 84 DDIKSYFSQFGTVVETEFPEDKTTGRRLGFAFVKYETSDEAQKA 127
>gi|296488280|tpg|DAA30393.1| TPA: RNA binding motif protein 28 isoform 1 [Bos taurus]
Length = 751
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 44/64 (68%), Gaps = 3/64 (4%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
R++++ L + D +++VFS++G + V++P+ K GK++GFAFV+F EA KAL+
Sbjct: 115 RLIIR-NLSFKCSEDDLKTVFSQFGTILEVNIPR-KPDGKMRGFAFVQFKNLLEAGKALK 172
Query: 73 LGLN 76
G+N
Sbjct: 173 -GMN 175
Score = 37.7 bits (86), Expect = 0.89, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 32/61 (52%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
G + +LPP A + +E +FS+ G V + K + +GF +V FS E+ +AL
Sbjct: 3 GLTLFVGRLPPSARSEQLEELFSQVGPVKQCFVVTEKGSKACRGFGYVTFSMVEDVQRAL 62
Query: 72 E 72
+
Sbjct: 63 K 63
>gi|393909831|gb|EFO16801.2| RNA-binding protein [Loa loa]
Length = 414
Score = 43.9 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
G + LPPE E + +F +G V V + K STGK KG+ FV E+A A+
Sbjct: 326 GWCIFVYNLPPETEDAVLWQLFGPFGAVLSVKIIKDFSTGKCKGYGFVTMGQYEDAVTAI 385
Query: 72 ------ELGLNPCPTDYQSSILTTTSR 92
+LG ++S ++++ +R
Sbjct: 386 TSLNGTQLGNRTLQVSFKSQMVSSATR 412
>gi|294929985|ref|XP_002779453.1| RNA-binding protein, putative [Perkinsus marinus ATCC 50983]
gi|239888561|gb|EER11248.1| RNA-binding protein, putative [Perkinsus marinus ATCC 50983]
Length = 504
Score = 43.9 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELG 74
+P + + ++ FS+YG + + K + TGK +GFA+V +ST EEA A+ G
Sbjct: 202 IPSDLDQGRLDQFFSQYGNIVDSVVMKDRITGKPRGFAYVTYSTPEEAQTAINAG 256
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 31/57 (54%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLN 76
+P ++ ++ V S+YG++ + + T + +GFA+ +ST EEA A G N
Sbjct: 334 VPASVDNGRLQEVMSQYGRIIDCIIMTDRVTARPRGFAYCTYSTPEEAQAACNGGSN 390
>gi|427738521|ref|YP_007058065.1| RRM domain-containing RNA-binding protein [Rivularia sp. PCC
7116]
gi|427373562|gb|AFY57518.1| RRM domain-containing RNA-binding protein [Rivularia sp. PCC
7116]
Length = 91
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
L E + ++ +F +YG+V + LP + G+++GFAFVE E+ T A+E
Sbjct: 8 LSYEVVEEELKQIFLEYGEVKSIYLPMDRDAGRIRGFAFVEMGNDEQETTAIE 60
>gi|391339315|ref|XP_003743997.1| PREDICTED: RNA-binding protein 28-like [Metaseiulus occidentalis]
Length = 834
Score = 43.9 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 42/64 (65%), Gaps = 2/64 (3%)
Query: 9 KKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAT 68
K+ R++++ E D ++S F K+G++ V++PK K GK++GFAFV+F++ A
Sbjct: 96 KQKSRLIVRNLSFKATEEDLMKS-FGKFGEIQSVNIPK-KPDGKMRGFAFVQFNSTPHAM 153
Query: 69 KALE 72
KA++
Sbjct: 154 KAVK 157
>gi|255532088|ref|YP_003092460.1| RNP-1 like RNA-binding protein [Pedobacter heparinus DSM 2366]
gi|255345072|gb|ACU04398.1| RNP-1 like RNA-binding protein [Pedobacter heparinus DSM 2366]
Length = 101
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
LP E D + +VF +G+V + + K + TG+ +GF FVE +EEA +A+
Sbjct: 8 LPLEVGEDELTAVFGDFGQVKSLRIIKDRETGQSRGFGFVEMPVEEEAKEAI 59
>gi|194868033|ref|XP_001972201.1| GG15393 [Drosophila erecta]
gi|190653984|gb|EDV51227.1| GG15393 [Drosophila erecta]
Length = 917
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
R+++K+ LP D + +F G +T + L K+ GK + F FV FST+EEA A+
Sbjct: 3 RIIVKQ-LPKHITEDKLRQIFGAQGTITDLQL-KYTPDGKFRQFCFVGFSTEEEAQSAIR 60
Query: 73 LGLNPC 78
N C
Sbjct: 61 HFDNTC 66
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 4 LVENNKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGK--LKGFAFVEF 61
L K+ G +L +P +A++ + +F +G++ + +PK +TG+ +GF FV++
Sbjct: 775 LASQKKQTGTKILVRNIPFQAQYREVRDIFKAFGELRSLRIPKKATTGEDAHRGFGFVDY 834
Query: 62 STKEEATKALE 72
+K EA +A +
Sbjct: 835 MSKAEAKRAFD 845
>gi|429851529|gb|ELA26715.1| peptidase family m20 m25 m40 protein [Colletotrichum gloeosporioides
Nara gc5]
Length = 1027
Score = 43.9 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKA 70
AE + +F ++G+VT V L K + TG KGFAF+ F+ + +A KA
Sbjct: 958 AEEQELRDMFERFGRVTRVFLAKDRETGLAKGFAFISFADRSDAVKA 1004
>gi|85001267|ref|XP_955352.1| RNA-binding protein [Theileria annulata strain Ankara]
gi|65303498|emb|CAI75876.1| RNA-binding protein, putative [Theileria annulata]
Length = 98
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
G V+L + EA+ + + F YG VT + L + TG +KG+A +EF + EA A+
Sbjct: 14 GWVILVTGIHEEAQEEDVREAFENYGTVTNLHLNLDRRTGYVKGYALLEFKNRNEAESAI 73
>gi|254421463|ref|ZP_05035181.1| RNA-binding protein, putative [Synechococcus sp. PCC 7335]
gi|196188952|gb|EDX83916.1| RNA-binding protein, putative [Synechococcus sp. PCC 7335]
Length = 81
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 28/45 (62%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFST 63
L +A D I VF +YG V V +P + TG+++GFAFVE S+
Sbjct: 7 NLSFDATRDDINEVFVEYGSVKSVKVPTDRETGRVRGFAFVEMSS 51
>gi|348551182|ref|XP_003461409.1| PREDICTED: probable RNA-binding protein 19-like [Cavia porcellus]
Length = 961
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 15 VLKEKLPPEAEHDYIESVFSKYGKVTYVSLPK-FKSTGKLKGFAFVEFSTKEEATKAL 71
+L +P +A+ I +FS +G++ V LPK TG+ +GF FV+F TK++A +A
Sbjct: 835 ILVRNIPFQADLREIRELFSTFGELKTVRLPKKMAGTGRHRGFGFVDFFTKQDAKRAF 892
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKA 70
GR+ ++ LP + + +E +FS YG ++ + P T K KGFAFV F E A KA
Sbjct: 402 GRLFVR-NLPYTSTEEDLEKLFSAYGPLSELHYPIDTLTKKPKGFAFVTFLFPEHAVKA 459
>gi|296815242|ref|XP_002847958.1| polyadenylate-binding protein [Arthroderma otae CBS 113480]
gi|238840983|gb|EEQ30645.1| polyadenylate-binding protein [Arthroderma otae CBS 113480]
Length = 708
Score = 43.9 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 22/46 (47%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Query: 31 SVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLN 76
++F KYG +T +L + TGK +GF FV FS E A+ A+E GLN
Sbjct: 185 ALFEKYGDITSATLSRDNETGKSRGFGFVNFSDHEAASAAVE-GLN 229
>gi|198470946|ref|XP_002133619.1| GA22715 [Drosophila pseudoobscura pseudoobscura]
gi|198145693|gb|EDY72246.1| GA22715 [Drosophila pseudoobscura pseudoobscura]
Length = 672
Score = 43.9 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 33/60 (55%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLNPCP 79
LP + D + FS +G++ ++ + K TG+ +G AFV FS +EEA AL N P
Sbjct: 213 LPRNIDDDMLTRTFSPFGQIVQRNILRDKLTGRPRGVAFVRFSKREEAQDALNTLNNTVP 272
>gi|344338389|ref|ZP_08769321.1| RNP-1 like RNA-binding protein [Thiocapsa marina 5811]
gi|343801671|gb|EGV19613.1| RNP-1 like RNA-binding protein [Thiocapsa marina 5811]
Length = 90
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 26 HDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLNPCP 79
D +++ FS YG+++ V+L K TG+ KGF FVE EA A++ GLN P
Sbjct: 14 QDELKTAFSAYGEISSVNLITDKFTGESKGFGFVEMPNNSEADAAIK-GLNETP 66
>gi|281343470|gb|EFB19054.1| hypothetical protein PANDA_014807 [Ailuropoda melanoleuca]
Length = 947
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 15 VLKEKLPPEAEHDYIESVFSKYGKVTYVSLPK-FKSTGKLKGFAFVEFSTKEEATKALE 72
+L +P +A+ I +FS +G++ V LPK TG +GF FV+F TK++A +A +
Sbjct: 821 ILVRNIPFQADSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAFQ 879
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKA 70
GR+ ++ LP + + +E +FSK+G ++ + P T K KGFAFV F E A +A
Sbjct: 392 GRLFIR-NLPYTSTEEDLEQLFSKFGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVRA 449
>gi|77379390|gb|ABA71352.1| sex-lethal isoform 2 [Bombyx mori]
Length = 313
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 32/53 (60%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
LP D +E++F KYG++ + + K++G +G AFV + +EEA +A+
Sbjct: 155 NLPRAITDDQLETIFGKYGRIVQKHILRDKNSGTPRGVAFVRYDKREEAQEAI 207
>gi|307102477|gb|EFN50751.1| hypothetical protein CHLNCDRAFT_33380 [Chlorella variabilis]
Length = 139
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 37/61 (60%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
G VVL + EA+ + + F+++G V + + + TG +KG+A VE+ TK+EA A+
Sbjct: 51 GWVVLVTGVHEEAQEEDVHDAFAEFGDVKNIYMNLDRRTGFVKGYALVEYGTKQEAQAAI 110
Query: 72 E 72
E
Sbjct: 111 E 111
>gi|426227971|ref|XP_004008088.1| PREDICTED: RNA-binding protein 28 isoform 1 [Ovis aries]
Length = 749
Score = 43.5 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 44/64 (68%), Gaps = 3/64 (4%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
R++++ L + D +++VFS++G + V++P+ K GK++GFAFV+F EA KAL+
Sbjct: 115 RLIIR-NLSFKCSEDDLKTVFSQFGTILEVNIPR-KPDGKMRGFAFVQFKNLLEAGKALK 172
Query: 73 LGLN 76
G+N
Sbjct: 173 -GMN 175
Score = 37.7 bits (86), Expect = 1.00, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 32/61 (52%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
G + +LPP A + +E +FS+ G V + K + +GF +V FS E+ +AL
Sbjct: 3 GLTLFVGRLPPSARSEQLEELFSQVGPVKQCFVVTEKGSKACRGFGYVTFSMLEDVQRAL 62
Query: 72 E 72
+
Sbjct: 63 K 63
>gi|301779826|ref|XP_002925333.1| PREDICTED: probable RNA-binding protein 19-like [Ailuropoda
melanoleuca]
Length = 963
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 15 VLKEKLPPEAEHDYIESVFSKYGKVTYVSLPK-FKSTGKLKGFAFVEFSTKEEATKALE 72
+L +P +A+ I +FS +G++ V LPK TG +GF FV+F TK++A +A +
Sbjct: 815 ILVRNIPFQADSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAFQ 873
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
R+++K LP + + +F+ +G +T SL KF GK + F F+ F ++EEA AL
Sbjct: 3 RLIVK-NLPNGMKEERFRQLFAAFGTLTDCSL-KFTKDGKFRKFGFIGFRSEEEARTAL 59
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKA 70
GR+ ++ LP + + +E +FSK+G ++ + P T K KGFAFV F E A +A
Sbjct: 404 GRLFIR-NLPYTSTEEDLEQLFSKFGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVRA 461
>gi|33865898|ref|NP_897457.1| RNA-binding protein [Synechococcus sp. WH 8102]
gi|33633068|emb|CAE07879.1| RNA-binding protein [Synechococcus sp. WH 8102]
Length = 85
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 34/54 (62%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
L +AE + + +FS+YG+V+ SLP + TG+ +GFAFV+ + + A++
Sbjct: 11 NLSWDAEREDLVHLFSQYGEVSKCSLPLDRETGRKRGFAFVDLANAADEKSAID 64
>gi|400602999|gb|EJP70597.1| cutinase negative acting protein [Beauveria bassiana ARSEF 2860]
Length = 448
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
LP + E D + FS+ +V V LP +G LKGF +V F++ E+A AL+
Sbjct: 315 LPFDTEQDTVRQFFSEVAEVASVRLPTDPDSGNLKGFGYVTFNSIEDAKSALD 367
Score = 34.7 bits (78), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 23/41 (56%)
Query: 32 VFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
F +G + + K+TG+ +GF +V+F E ATKA E
Sbjct: 222 AFKSFGNIVSARVVTDKNTGRSRGFGYVDFGDSESATKAYE 262
>gi|22298986|ref|NP_682233.1| RNA binding protein [Thermosynechococcus elongatus BP-1]
gi|22295168|dbj|BAC08995.1| RNA binding protein [Thermosynechococcus elongatus BP-1]
Length = 90
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 30/50 (60%)
Query: 23 EAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
EA + + VF KYG + + LP + TGK +GFAFVE + + + A++
Sbjct: 11 EATENDLREVFEKYGAIRRIVLPVDRETGKRRGFAFVELADETQEAVAID 60
>gi|345569038|gb|EGX51907.1| hypothetical protein AOL_s00043g641 [Arthrobotrys oligospora ATCC
24927]
Length = 512
Score = 43.5 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 32/47 (68%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKA 70
A+ + + + S++G+VT V +P K TG KGFA+V FST +EA KA
Sbjct: 365 ADEEALGAAMSEHGEVTSVRIPTDKDTGNKKGFAYVTFSTIDEAKKA 411
>gi|342879464|gb|EGU80711.1| hypothetical protein FOXB_08751 [Fusarium oxysporum Fo5176]
Length = 794
Score = 43.5 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 6 ENNKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKE 65
E + V +K P E D+ E +F K+G VT SL + GK +GF FV F+T E
Sbjct: 234 EMKANFTNVYVKNIAPDVTEDDFRE-LFEKFGDVTSSSLAR-DQEGKSRGFGFVNFTTHE 291
Query: 66 EATKALE 72
A+KA++
Sbjct: 292 SASKAVD 298
>gi|312067233|ref|XP_003136646.1| hypothetical protein LOAG_01058 [Loa loa]
gi|307768188|gb|EFO27422.1| hypothetical protein LOAG_01058 [Loa loa]
Length = 655
Score = 43.5 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 1 MAELVENNKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVE 60
+ E+ E +++ V +K E + + +E +FSK+GK+T ++ + GK KGF FV
Sbjct: 188 LREMGETARRFTNVYIK-NFADELDKEALEKLFSKFGKITSAAV-MVDADGKSKGFGFVA 245
Query: 61 FSTKEEATKAL 71
F E+A KA+
Sbjct: 246 FENPEDAEKAV 256
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 25/68 (36%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Query: 5 VENNKKYGRVVLKEK-LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFST 63
VE ++Y V L K L D ++ F YGK+T + G+ KGF FV F
Sbjct: 295 VERMQRYQGVNLYVKNLDDTVNDDILKQNFEAYGKITSAKV-MCDDNGRSKGFGFVCFEK 353
Query: 64 KEEATKAL 71
+EATKA+
Sbjct: 354 PDEATKAV 361
>gi|270009354|gb|EFA05802.1| hypothetical protein TcasGA2_TC030646 [Tribolium castaneum]
Length = 212
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
LP + D + +FS YG++ S+ K K TG +G AFV FS EEA A+
Sbjct: 120 LPKDVTEDDVHRLFSNYGEIIQKSVLKDKITGMPRGVAFVRFSRGEEAKAAI 171
>gi|944903|gb|AAA98604.1| Rnp24p [Schizosaccharomyces pombe]
Length = 347
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 33 FSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLNPCPTDY 82
F + G++ V L F+ TGK KGF FV+F + KA+ELG N +Y
Sbjct: 248 FGQVGQIRRVRLMTFEDTGKCKGFGFVDFPDIDTCMKAMELGHNSWRLEY 297
>gi|225543108|ref|NP_001139415.1| sex lethal [Tribolium castaneum]
Length = 218
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
LP + D + +FS YG++ S+ K K TG +G AFV FS EEA A+
Sbjct: 120 LPKDVTEDDVHRLFSNYGEIIQKSVLKDKITGMPRGVAFVRFSRGEEAKAAI 171
>gi|149276517|ref|ZP_01882661.1| RNA-binding protein [Pedobacter sp. BAL39]
gi|149233037|gb|EDM38412.1| RNA-binding protein [Pedobacter sp. BAL39]
Length = 100
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
LP E D + +VF +G+V + + K + TG+ +GF FVE +EEA +A+
Sbjct: 8 LPLEVGEDELTAVFGDFGQVKSLRIIKDRETGQSRGFGFVEMPVEEEAKEAI 59
>gi|116202083|ref|XP_001226853.1| hypothetical protein CHGG_08926 [Chaetomium globosum CBS 148.51]
gi|121932498|sp|Q2GSX8.1|PABP_CHAGB RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|88177444|gb|EAQ84912.1| hypothetical protein CHGG_08926 [Chaetomium globosum CBS 148.51]
Length = 783
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 24/50 (48%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 23 EAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
EA + +F+KYG VT SL + S GK +GF FV F+T E A KA+E
Sbjct: 256 EATDEEFRDLFAKYGDVTSSSLAR-DSEGKSRGFGFVNFTTHECAAKAVE 304
>gi|86607423|ref|YP_476186.1| RNA-binding protein [Synechococcus sp. JA-3-3Ab]
gi|86555965|gb|ABD00923.1| putative RNA-binding protein [Synechococcus sp. JA-3-3Ab]
Length = 181
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 32/53 (60%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
LP E + +E +FS G+V + + + TGK +GF FV ST+E+A + +E
Sbjct: 10 LPEEVDRQALEKLFSSAGEVISTKVIRDRRTGKCRGFGFVTVSTEEQAQQYIE 62
>gi|354470659|ref|XP_003497562.1| PREDICTED: RNA-binding protein 28 isoform 3 [Cricetulus griseus]
Length = 761
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 35/50 (70%), Gaps = 2/50 (4%)
Query: 27 DYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLN 76
D +++ F+ YG V V++P+ K GK++GFAFV+F EA KAL+ G+N
Sbjct: 128 DDLKTAFTPYGTVLEVNIPR-KPDGKMRGFAFVQFKNLLEAGKALK-GMN 175
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 30/54 (55%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+LPP A + +E +FS+ G V + K + +GF +V FS E+ +AL+
Sbjct: 10 RLPPSARSEQLEELFSQVGPVKQCFVVTEKGSKACRGFGYVTFSMLEDVQRALK 63
>gi|354470657|ref|XP_003497561.1| PREDICTED: RNA-binding protein 28 isoform 2 [Cricetulus griseus]
Length = 746
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 35/50 (70%), Gaps = 2/50 (4%)
Query: 27 DYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLN 76
D +++ F+ YG V V++P+ K GK++GFAFV+F EA KAL+ G+N
Sbjct: 128 DDLKTAFTPYGTVLEVNIPR-KPDGKMRGFAFVQFKNLLEAGKALK-GMN 175
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 30/54 (55%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+LPP A + +E +FS+ G V + K + +GF +V FS E+ +AL+
Sbjct: 10 RLPPSARSEQLEELFSQVGPVKQCFVVTEKGSKACRGFGYVTFSMLEDVQRALK 63
>gi|429859384|gb|ELA34169.1| pre-rRNA processing protein [Colletotrichum gloeosporioides Nara
gc5]
Length = 866
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 27/59 (45%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
++V+K LP EA I ++FS YG++ V LPK K +GFAF EF T EA AL
Sbjct: 743 KIVIK-NLPFEATKKDIRTLFSTYGQLRAVRLPK-KFGNSTRGFAFAEFVTPREAENAL 799
>gi|56752106|ref|YP_172807.1| RRM type RNA-binding protein [Synechococcus elongatus PCC 6301]
gi|81300808|ref|YP_401016.1| RNA-binding region RNP-1 [Synechococcus elongatus PCC 7942]
gi|56687065|dbj|BAD80287.1| RRM type RNA-binding protein [Synechococcus elongatus PCC 6301]
gi|81169689|gb|ABB58029.1| RNA-binding region RNP-1 [Synechococcus elongatus PCC 7942]
Length = 95
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
A + + VF++YG V+ VSLP + TG+L+GFAF+E A+
Sbjct: 12 ATEEDVREVFAEYGPVSRVSLPVDRETGRLRGFAFIEMEEDAHEDAAI 59
>gi|407921942|gb|EKG15076.1| hypothetical protein MPH_07759 [Macrophomina phaseolina MS6]
Length = 552
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 33/53 (62%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
LP E I ++FS+YG+ YV+L + K TGK KGFAF+++ + A++
Sbjct: 40 LPYEVSEGDIVTIFSQYGEPVYVNLVRDKETGKSKGFAFLKYEDQRSCDLAVD 92
>gi|354470655|ref|XP_003497560.1| PREDICTED: RNA-binding protein 28 isoform 1 [Cricetulus griseus]
Length = 707
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 35/50 (70%), Gaps = 2/50 (4%)
Query: 27 DYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLN 76
D +++ F+ YG V V++P+ K GK++GFAFV+F EA KAL+ G+N
Sbjct: 128 DDLKTAFTPYGTVLEVNIPR-KPDGKMRGFAFVQFKNLLEAGKALK-GMN 175
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 30/54 (55%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+LPP A + +E +FS+ G V + K + +GF +V FS E+ +AL+
Sbjct: 10 RLPPSARSEQLEELFSQVGPVKQCFVVTEKGSKACRGFGYVTFSMLEDVQRALK 63
>gi|119492303|ref|ZP_01623650.1| RNA-binding region protein [Lyngbya sp. PCC 8106]
gi|119453188|gb|EAW34355.1| RNA-binding region protein [Lyngbya sp. PCC 8106]
Length = 101
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
L E + ++SVF++YG V VS+P + TG+ +GFAFVE + + A+E
Sbjct: 8 LSYEVTEEDLKSVFAEYGTVQRVSIPTDRETGRPRGFAFVEMQEESKEDAAIE 60
>gi|159902554|ref|YP_001549898.1| RNA recognition motif-containing protein [Prochlorococcus marinus
str. MIT 9211]
gi|159887730|gb|ABX07944.1| RNA-binding region RNP-1 (RNA recognition motif) [Prochlorococcus
marinus str. MIT 9211]
Length = 245
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 33/54 (61%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
LP AE + + +F+ +G+V SLP + TG+ +GFAF+E + + + A+E
Sbjct: 7 NLPFRAEQEDVIQLFAPFGEVANCSLPLERDTGRKRGFAFIEMADEAAESSAIE 60
>gi|312092240|ref|XP_003147268.1| RNA-binding protein [Loa loa]
Length = 383
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
G + LPPE E + +F +G V V + K STGK KG+ FV E+A A+
Sbjct: 295 GWCIFVYNLPPETEDAVLWQLFGPFGAVLSVKIIKDFSTGKCKGYGFVTMGQYEDAVTAI 354
Query: 72 ------ELGLNPCPTDYQSSILTTTSR 92
+LG ++S ++++ +R
Sbjct: 355 TSLNGTQLGNRTLQVSFKSQMVSSATR 381
>gi|410976696|ref|XP_003994750.1| PREDICTED: probable RNA-binding protein 19 [Felis catus]
Length = 994
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 15 VLKEKLPPEAEHDYIESVFSKYGKVTYVSLPK-FKSTGKLKGFAFVEFSTKEEATKAL 71
+L +P +A+ I +FS +G++ V LPK TG +GF FV+F TK++A +A
Sbjct: 826 ILVRNIPFQADSREIRELFSTFGELKTVRLPKKMSGTGSHRGFGFVDFLTKQDAKRAF 883
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
R+++K LP + + +F+ +G +T SL KF GK + F F+ F ++EEA AL
Sbjct: 3 RLIVK-NLPNGMKEERFRQLFASFGALTDCSL-KFTKDGKFRKFGFIGFKSEEEARSAL 59
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKA 70
GR+ ++ LP + + +E +FS++G ++ + P T K KGFAFV F E A KA
Sbjct: 395 GRLFVR-NLPYSSTEEDLEQLFSRFGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKA 452
>gi|348671618|gb|EGZ11439.1| hypothetical protein PHYSODRAFT_435859 [Phytophthora sojae]
Length = 92
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 34/55 (61%)
Query: 18 EKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+ +P + D + +FSK+G++ V +P+ + + + +GFAFV F K +A A+E
Sbjct: 12 DNVPFQIGSDELRDLFSKFGEIGDVYIPRARGSNESRGFAFVRFMEKRDAEDAIE 66
>gi|258564845|ref|XP_002583167.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237906868|gb|EEP81269.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 1297
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLNP 77
PPEA+ YI +F YG++ V P K + F +V+F++ +A ALEL P
Sbjct: 904 FPPEADEAYIRRIFGPYGEIAEVRFPSLKFNTHRR-FCYVQFASTVDAHAALELDQEP 960
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
GR + L +A D + +F +GKV +P K+ G KGF FV FST E A AL
Sbjct: 987 GREIHISNLDWKATEDDLVELFMAFGKVEVARIPT-KADGGSKGFGFVAFSTPETANAAL 1045
Query: 72 EL 73
+
Sbjct: 1046 AM 1047
>gi|432951209|ref|XP_004084750.1| PREDICTED: RNA-binding protein with serine-rich domain 1-B-like
[Oryzias latipes]
Length = 290
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 27 DYIESVFSKYGKVTYVSLPKFKSTGKL-KGFAFVEFSTKEEATKALE 72
++I +FS YGK+ + +P ++ L KG+A+VEF + EEA KAL+
Sbjct: 160 EHIHEIFSTYGKIKMIDMPVNRAHPHLSKGYAYVEFESPEEAEKALK 206
>gi|189503128|gb|ACE06945.1| unknown [Schistosoma japonicum]
gi|226481256|emb|CAX79093.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
Length = 58
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 27/44 (61%)
Query: 18 EKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEF 61
LP HD + F +YG++ V++P TG++KG+AF+E+
Sbjct: 11 RHLPDTCRHDDLRRCFGRYGRIVDVTIPLDFFTGRMKGYAFIEY 54
>gi|427382637|ref|ZP_18879357.1| hypothetical protein HMPREF9447_00390 [Bacteroides oleiciplenus
YIT 12058]
gi|425729882|gb|EKU92733.1| hypothetical protein HMPREF9447_00390 [Bacteroides oleiciplenus
YIT 12058]
Length = 130
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 27 DYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLNPCPTDYQSSI 86
D ++ +F++YG+VT + + TG+ +GF FVE E+ KA++ GLN TD++
Sbjct: 15 DSLQELFTQYGEVTSAYIINDRETGRSRGFGFVEMPNDEDGQKAID-GLN--ETDFEGKT 71
Query: 87 LTTT 90
+ +
Sbjct: 72 IAVS 75
>gi|304365|gb|AAA20897.1| RNA-binding protein [Chlorogloeopsis sp.]
Length = 99
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 27/44 (61%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFST 63
L E D + +VF++YG V V LP + TG+++GF FVE T
Sbjct: 8 LSYEVTEDSLNAVFAEYGSVKRVQLPTDRETGRVRGFGFVEMGT 51
>gi|391332745|ref|XP_003740790.1| PREDICTED: RNA-binding protein 8A-like [Metaseiulus occidentalis]
Length = 165
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 31/51 (60%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKA 70
+ EA+ D I F+ YG++ + L + TG LKG+A VEFS+ EA KA
Sbjct: 82 VNEEAQEDDIHQKFADYGEIKNLHLNLDRRTGFLKGYALVEFSSYAEAQKA 132
>gi|303279743|ref|XP_003059164.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459000|gb|EEH56296.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 150
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 37/61 (60%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
G ++L + EA+ D I F+ +G++ + L + TG +KG+A VE+ TK+EA A+
Sbjct: 64 GWIILITNVHEEAQEDDIHEHFADFGEIKNLHLNLDRRTGFVKGYALVEYETKKEAQAAI 123
Query: 72 E 72
+
Sbjct: 124 D 124
>gi|57165457|gb|AAW34403.1| RNA-binding protein AUF1 [Paracentrotus lividus]
Length = 205
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 33/51 (64%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKA 70
+ + + D I+S FS++G V P+ K+TG+ GFAFV++ T +EA KA
Sbjct: 9 IGSDLKDDDIKSYFSQFGTVVETEFPEDKTTGRRLGFAFVKYETSDEAQKA 59
>gi|22299798|ref|NP_683045.1| RNA-binding protein [Thermosynechococcus elongatus BP-1]
gi|22295982|dbj|BAC09807.1| RNA-binding protein [Thermosynechococcus elongatus BP-1]
Length = 94
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 30/48 (62%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
A + +E+VF++YG V V LP + TG+ +GF FVE S+ E A+
Sbjct: 12 ATQEDLEAVFAEYGSVKQVYLPVDRETGRKRGFGFVEMSSDAEEEAAI 59
>gi|442749963|gb|JAA67141.1| Putative rna-binding protein rrm superfamily [Ixodes ricinus]
Length = 863
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 15 VLKEKLPPEAEHDYIESVFSKYGKVTYVSLPK-FKSTGKLKGFAFVEFSTKEEATKALE 72
+L +P EA ++ +FS +G + + LPK TG+ +GFAFV+F TK +A +A +
Sbjct: 739 ILVRNIPFEATKKELQELFSVFGTLRDIRLPKKMAGTGRHRGFAFVDFLTKNDAKRAFQ 797
Score = 38.5 bits (88), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 27/45 (60%)
Query: 27 DYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
D IE++F K+G ++ V L K T K KGFAFV F E A KA
Sbjct: 338 DDIEALFKKFGPISEVHLSIDKITRKPKGFAFVSFMFPEHAIKAF 382
>gi|359489218|ref|XP_002270340.2| PREDICTED: uncharacterized protein LOC100232913 [Vitis vinifera]
gi|297734640|emb|CBI16691.3| unnamed protein product [Vitis vinifera]
Length = 812
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 32/97 (32%), Positives = 46/97 (47%), Gaps = 12/97 (12%)
Query: 2 AELVENNKKYGRVVLKEK------------LPPEAEHDYIESVFSKYGKVTYVSLPKFKS 49
AE+V+ + V KE+ L +A D + VFS+ G+VT V L
Sbjct: 209 AEMVDAEDEEHHEVFKERRKRKEFEVFVGGLDKDATEDDLRKVFSQVGEVTEVRLMMNPQ 268
Query: 50 TGKLKGFAFVEFSTKEEATKALELGLNPCPTDYQSSI 86
T K KGFAF+ F+T E+A +A+ NP Q +
Sbjct: 269 TKKNKGFAFLRFATVEQAKRAVTELKNPVVNGKQCGV 305
Score = 35.0 bits (79), Expect = 5.4, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 27/55 (49%)
Query: 13 RVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEA 67
+ V + LP + D + + KYG++ + L + + K K F FV F T + A
Sbjct: 409 KTVFIDGLPASWDEDRVRELLKKYGEIEKIELARNMPSAKRKDFGFVTFDTHDAA 463
>gi|241947949|ref|XP_002416697.1| pre-rRNA processing and ribosome biogenesis, nuclear localization
sequence binding, nucleolar protein, putative [Candida
dubliniensis CD36]
gi|223640035|emb|CAX44279.1| pre-rRNA processing and ribosome biogenesis, nuclear localization
sequence binding, nucleolar protein, putative [Candida
dubliniensis CD36]
Length = 423
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 8/68 (11%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLN------- 76
A D + +VF +YG V +P T + KGF +V+FS+ +EA ALE LN
Sbjct: 309 ANRDNLFTVFGEYGNVISCRVPTHPDTQQPKGFGYVQFSSVDEAKAALE-ALNGEYIEGR 367
Query: 77 PCPTDYQS 84
PC D+ +
Sbjct: 368 PCRLDFST 375
>gi|19115882|ref|NP_594970.1| RNA-binding protein Rnp24 [Schizosaccharomyces pombe 972h-]
gi|13432246|sp|Q09100.2|RNP24_SCHPO RecName: Full=RNA-binding protein rnp24
gi|3395570|emb|CAB16280.1| RNA-binding protein Rnp24 [Schizosaccharomyces pombe]
Length = 369
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 33 FSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLNPCPTDY 82
F + G++ V L F+ TGK KGF FV+F + KA+ELG N +Y
Sbjct: 248 FGQVGQIRRVRLMTFEDTGKCKGFGFVDFPDIDTCMKAMELGHNSWRLEY 297
>gi|409049565|gb|EKM59042.1| hypothetical protein PHACADRAFT_169505 [Phanerochaete carnosa
HHB-10118-sp]
Length = 578
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 29/50 (58%)
Query: 23 EAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+A D + VFS YG V V +P + +G+ KGF +VEF E A KA E
Sbjct: 419 DATEDQLWEVFSDYGSVKSVRMPTDRESGRPKGFGYVEFEDVESAKKAHE 468
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 33/49 (67%)
Query: 25 EHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALEL 73
++D++ES F++ G+V + ++TGK +GF FV F++ E KALEL
Sbjct: 321 DNDWLESEFAECGEVVSARVQMDRNTGKSRGFGFVTFASPEAVDKALEL 369
>gi|170674510|gb|ACB30143.1| poly(A) RNA binding protein [Epichloe festucae]
Length = 739
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 22 PEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
PEA D +F +YG++T SL + GK +GF FV ++T E A KA++
Sbjct: 249 PEASDDEFRELFERYGEITSSSLAR-DQDGKSRGFGFVNYTTHESAYKAVD 298
>gi|112734730|ref|NP_001036780.1| sex-lethal isoform L [Bombyx mori]
gi|77379388|gb|ABA71351.1| sex-lethal isoform 1 [Bombyx mori]
Length = 336
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 32/53 (60%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
LP D +E++F KYG++ + + K++G +G AFV + +EEA +A+
Sbjct: 155 NLPRAITDDQLETIFGKYGRIVQKHILRDKNSGTPRGVAFVRYDKREEAQEAI 207
>gi|282901124|ref|ZP_06309055.1| RNA-binding region protein RNP-1 [Cylindrospermopsis raciborskii
CS-505]
gi|281193956|gb|EFA68922.1| RNA-binding region protein RNP-1 [Cylindrospermopsis raciborskii
CS-505]
Length = 99
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 29/44 (65%)
Query: 20 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFST 63
L E D + +VF++YG V V +P + TG+++GFAFVE ++
Sbjct: 8 LSYEVTQDALTAVFAEYGSVKRVQIPTDRETGRVRGFAFVEMNS 51
>gi|406597827|ref|YP_006748957.1| hypothetical protein MASE_14495 [Alteromonas macleodii ATCC
27126]
gi|406375148|gb|AFS38403.1| hypothetical protein MASE_14495 [Alteromonas macleodii ATCC
27126]
Length = 117
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 15 VLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+L LP + +E +F ++G + L ++TG KGF FVE ST+EE KA+E
Sbjct: 3 ILVRNLPKTFTQENLEDLFFEFGTIASCDLVMDEATGLSKGFGFVEMSTQEETDKAIE 60
>gi|89885655|dbj|BAE86938.1| sex-lethal [Bombyx mori]
Length = 336
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 32/53 (60%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
LP D +E++F KYG++ + + K++G +G AFV + +EEA +A+
Sbjct: 155 NLPRAITDDQLETIFGKYGRIVQKHILRDKNSGTPRGVAFVRYDKREEAQEAI 207
>gi|388854650|emb|CCF51807.1| probable RNA-binding protein [Ustilago hordei]
Length = 874
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 15 VLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+L + LP EA I +FS G V V LPK K +GFAFVE++T EA A+E
Sbjct: 739 ILVKNLPFEATKKDIRDLFSSQGLVKSVRLPK-KFDNSTRGFAFVEYTTVREAQAAME 795
Score = 38.9 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 3 ELVENNKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFS 62
++V+ + GR+ ++ LP A D ++S F +G V V +P K T KG AF+ F+
Sbjct: 320 KIVDQIMESGRLFVR-NLPFAASEDEVQSFFESFGSVKQVHIPLDKQTKASKGLAFISFT 378
Query: 63 TKEEATKAL 71
A A
Sbjct: 379 DPAHALAAF 387
>gi|170579093|ref|XP_001894673.1| polyadenylate-binding protein 1 [Brugia malayi]
gi|158598601|gb|EDP36463.1| polyadenylate-binding protein 1, putative [Brugia malayi]
Length = 655
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 1 MAELVENNKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVE 60
+ E+ E +++ V +K E + + +E +FSK+GK+T ++ + GK KGF FV
Sbjct: 188 LREMGETARRFTNVYIK-NFADELDKEALEKLFSKFGKITSAAV-MVDADGKSKGFGFVA 245
Query: 61 FSTKEEATKAL 71
F E+A KA+
Sbjct: 246 FENPEDAEKAV 256
Score = 35.4 bits (80), Expect = 5.0, Method: Composition-based stats.
Identities = 25/68 (36%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Query: 5 VENNKKYGRVVLKEK-LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFST 63
VE ++Y V L K L D ++ F YGK+T + G+ KGF FV F
Sbjct: 295 VERMQRYQGVNLYVKNLDDTVNDDILKQNFEAYGKITSAKV-MCDDNGRSKGFGFVCFEK 353
Query: 64 KEEATKAL 71
+EATKA+
Sbjct: 354 PDEATKAV 361
>gi|448878314|gb|AGE46120.1| arginine/serine-rich splicing factor SC30 transcript I [Sorghum
bicolor]
Length = 250
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 29/41 (70%)
Query: 32 VFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+F KYG++ + +P+ + TG +GFAFV + ++EA KA++
Sbjct: 35 LFDKYGEIVDIYIPRDRRTGDSRGFAFVRYKYEDEAQKAVD 75
>gi|432937502|ref|XP_004082431.1| PREDICTED: polyadenylate-binding protein 4-like [Oryzias latipes]
Length = 629
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 2 AELVENNKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEF 61
AEL K++ V +K E E + ++ +F KYGK V + S+GK +GF FV F
Sbjct: 181 AELGAKAKEFTNVYIK-NFGDEMEDEQLKEMFEKYGKTLSVKVMT-DSSGKSRGFGFVSF 238
Query: 62 STKEEATKALE 72
E+A KA+E
Sbjct: 239 EKHEDANKAVE 249
>gi|357017085|gb|AET50571.1| hypothetical protein [Eimeria tenella]
Length = 527
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 18 EKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+ LPPE D + + ++GK+ ++L K + TGK +G+ F E+ E +A+E
Sbjct: 304 QNLPPEMGEDQVRDLLEQFGKLRVLNLIKNRQTGKHRGYGFFEYEDPEVTDQAIE 358
>gi|330936367|ref|XP_003305362.1| hypothetical protein PTT_18177 [Pyrenophora teres f. teres 0-1]
gi|311317661|gb|EFQ86548.1| hypothetical protein PTT_18177 [Pyrenophora teres f. teres 0-1]
Length = 1266
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 34/60 (56%)
Query: 12 GRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
GR V L + + ++ VF+K+GK+ LP KSTG +GF +V + TKE A A+
Sbjct: 993 GREVYIWHLNFKTKEREVKEVFAKFGKIERTKLPIIKSTGNNRGFCYVVYETKESADAAV 1052
>gi|226530532|ref|NP_001140562.1| uncharacterized protein LOC100272627 [Zea mays]
gi|194699996|gb|ACF84082.1| unknown [Zea mays]
gi|414590932|tpg|DAA41503.1| TPA: hypothetical protein ZEAMMB73_776046 [Zea mays]
Length = 251
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 29/41 (70%)
Query: 32 VFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
+F KYG++ + +P+ + TG +GFAFV + ++EA KA++
Sbjct: 36 LFDKYGEIVDIYIPRDRRTGDSRGFAFVRYKYEDEAQKAVD 76
>gi|168015560|ref|XP_001760318.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688332|gb|EDQ74709.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 878
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 23 EAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
EA ++ +F+ +G++ + LPK K G +GFAFVEF TK+EA A E
Sbjct: 766 EATRKDLQQIFNPFGQIKSIRLPK-KFDGNHRGFAFVEFLTKKEAQNAFE 814
Score = 34.7 bits (78), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 1 MAELVENNKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVE 60
+AE E+ + GR+ ++ LP A + + +F K+G+++ V L K+T + K AFV
Sbjct: 319 LAEEQESVSETGRLFVR-NLPYTATEEELAELFGKFGELSEVHLVLDKTTKRSKAMAFVL 377
Query: 61 FSTKEEATKALE 72
+ E A +A+E
Sbjct: 378 YMIPECAVRAME 389
>gi|7022371|dbj|BAA91575.1| unnamed protein product [Homo sapiens]
Length = 759
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 36/50 (72%), Gaps = 2/50 (4%)
Query: 27 DYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLN 76
D +++VF+++G V V++P+ K GK++GF FV+F EA KAL+ G+N
Sbjct: 128 DDLKTVFAQFGAVLEVNIPR-KPDGKMRGFGFVQFKNLLEAGKALK-GMN 175
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 29/53 (54%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
+LPP A + +E +FS+ G V + K + +GF +V FS E+ +AL
Sbjct: 10 RLPPSARSEQLEELFSQVGPVKQCFVVTEKGSKACRGFGYVTFSMLEDVQRAL 62
>gi|353558839|sp|C8V330.1|EIF3G_EMENI RecName: Full=Eukaryotic translation initiation factor 3 subunit G;
Short=eIF3g; AltName: Full=Eukaryotic translation
initiation factor 3 RNA-binding subunit; Short=eIF-3
RNA-binding subunit; AltName: Full=Translation
initiation factor eIF3 p33 subunit homolog; Short=eIF3
p33 homolog
gi|259479801|tpe|CBF70356.1| TPA: Eukaryotic translation initiation factor 3 subunit G
(eIF3g)(Translation initiation factor eIF3 p33 subunit
homolog)(eIF3 p33 homolog)(Eukaryotic translation
initiation factor 3 RNA-binding subunit)(eIF-3
RNA-binding subunit)
[Source:UniProtKB/Swiss-Prot;Acc:Q5B0B3] [Aspergillus
nidulans FGSC A4]
Length = 289
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 31/49 (63%)
Query: 24 AEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
AE + +F ++G+VT V L + + T + KGFAF+ F+ + +A +A +
Sbjct: 220 AEEQELRDLFERFGRVTRVFLARDRETQRAKGFAFISFADRSDAARACD 268
>gi|114615813|ref|XP_001152135.1| PREDICTED: RNA-binding protein 28 isoform 5 [Pan troglodytes]
gi|410207702|gb|JAA01070.1| RNA binding motif protein 28 [Pan troglodytes]
gi|410254888|gb|JAA15411.1| RNA binding motif protein 28 [Pan troglodytes]
gi|410295816|gb|JAA26508.1| RNA binding motif protein 28 [Pan troglodytes]
Length = 761
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 36/50 (72%), Gaps = 2/50 (4%)
Query: 27 DYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLN 76
D +++VF+++G V V++P+ K GK++GF FV+F EA KAL+ G+N
Sbjct: 128 DDLKTVFAQFGAVLEVNIPR-KPDGKMRGFGFVQFKNLLEAGKALK-GMN 175
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 29/53 (54%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
+LPP A + +E +FS+ G V + K + +GF +V FS E+ +AL
Sbjct: 10 RLPPSARSEQLEELFSQVGPVKQCFVVTEKGSKACRGFGYVTFSMLEDVQRAL 62
>gi|187960109|ref|NP_060547.2| RNA-binding protein 28 isoform 1 [Homo sapiens]
gi|55976611|sp|Q9NW13.3|RBM28_HUMAN RecName: Full=RNA-binding protein 28; AltName: Full=RNA-binding
motif protein 28
gi|15530220|gb|AAH13889.1| RNA binding motif protein 28 [Homo sapiens]
gi|51095071|gb|EAL24314.1| RNA binding motif protein 28 [Homo sapiens]
gi|119604049|gb|EAW83643.1| RNA binding motif protein 28, isoform CRA_a [Homo sapiens]
gi|119604050|gb|EAW83644.1| RNA binding motif protein 28, isoform CRA_a [Homo sapiens]
Length = 759
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 36/50 (72%), Gaps = 2/50 (4%)
Query: 27 DYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLN 76
D +++VF+++G V V++P+ K GK++GF FV+F EA KAL+ G+N
Sbjct: 128 DDLKTVFAQFGAVLEVNIPR-KPDGKMRGFGFVQFKNLLEAGKALK-GMN 175
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 29/53 (54%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
+LPP A + +E +FS+ G V + K + +GF +V FS E+ +AL
Sbjct: 10 RLPPSARSEQLEELFSQVGPVKQCFVVTEKGSKACRGFGYVTFSMLEDVQRAL 62
>gi|449665135|ref|XP_002159315.2| PREDICTED: cleavage stimulation factor subunit 2-like [Hydra
magnipapillata]
Length = 413
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 35/69 (50%)
Query: 3 ELVENNKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFS 62
++ E +K R V +P EA D ++ +FS+ G V L + TGK KG+ F E+
Sbjct: 16 QMKEAAEKSARSVFVGNIPYEASDDQLKDIFSQAGPVLSFRLVYDRETGKPKGYGFCEYK 75
Query: 63 TKEEATKAL 71
E A A+
Sbjct: 76 DSETAQSAM 84
>gi|170057956|ref|XP_001864710.1| fuse-binding protein-interacting repressor siahbp1 [Culex
quinquefasciatus]
gi|167877220|gb|EDS40603.1| fuse-binding protein-interacting repressor siahbp1 [Culex
quinquefasciatus]
Length = 661
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 3 ELVENNKKYGRVVLKEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFS 62
E+ E K Y R+ + P E D I+SVF +G + + + S KG+AF+E+
Sbjct: 261 EIQEEAKNYNRIYIASIHPDLTEED-IKSVFEAFGAIATCKMSQGSSAHSHKGYAFIEYQ 319
Query: 63 TKEEATKAL 71
T + A +A+
Sbjct: 320 TNQSAIEAI 328
Score = 35.4 bits (80), Expect = 4.7, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 23 EAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALE 72
E + D I + F +G + +++ T K KGFAFVE+ E A ALE
Sbjct: 183 ELKEDTIRAAFLPFGPIKSINMSWDPITQKHKGFAFVEYEIPEGAQLALE 232
>gi|426357780|ref|XP_004046210.1| PREDICTED: RNA-binding protein 28 [Gorilla gorilla gorilla]
Length = 723
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 36/50 (72%), Gaps = 2/50 (4%)
Query: 27 DYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLN 76
D +++VF+++G V V++P+ K GK++GF FV+F EA KAL+ G+N
Sbjct: 96 DDLKTVFAQFGAVLEVNIPR-KPDGKMRGFGFVQFKNLLEAGKALK-GMN 143
>gi|332224371|ref|XP_003261340.1| PREDICTED: RNA-binding protein 28 isoform 1 [Nomascus leucogenys]
Length = 763
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 36/50 (72%), Gaps = 2/50 (4%)
Query: 27 DYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKALELGLN 76
D +++VF+++G V V++P+ K GK++GF FV+F EA KAL+ G+N
Sbjct: 128 DDLKTVFAQFGAVLEVNIPR-KPDGKMRGFGFVQFKNLLEAGKALK-GMN 175
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 29/53 (54%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
+LPP A + +E +FS+ G V + K + +GF +V FS E+ +AL
Sbjct: 10 RLPPSARSEQLEELFSQVGPVKQCFVVTEKGSKACRGFGYVTFSMLEDVQRAL 62
>gi|290563184|ref|NP_001166854.1| sex-lethal isoform S [Bombyx mori]
gi|89885657|dbj|BAE86939.1| sex-lethal [Bombyx mori]
Length = 290
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 32/53 (60%)
Query: 19 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEATKAL 71
LP D +E++F KYG++ + + K++G +G AFV + +EEA +A+
Sbjct: 109 NLPRAITDDQLETIFGKYGRIVQKHILRDKNSGTPRGVAFVRYDKREEAQEAI 161
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.314 0.132 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,818,358,713
Number of Sequences: 23463169
Number of extensions: 65152488
Number of successful extensions: 165790
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 9500
Number of HSP's successfully gapped in prelim test: 2714
Number of HSP's that attempted gapping in prelim test: 147731
Number of HSP's gapped (non-prelim): 20299
length of query: 115
length of database: 8,064,228,071
effective HSP length: 82
effective length of query: 33
effective length of database: 6,140,248,213
effective search space: 202628191029
effective search space used: 202628191029
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 69 (31.2 bits)