BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy3929
         (120 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|A4IFE4|RGF1B_BOVIN Ras-GEF domain-containing family member 1B OS=Bos taurus
           GN=RASGEF1B PE=2 SV=1
          Length = 472

 Score = 95.5 bits (236), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 43/78 (55%), Positives = 58/78 (74%), Gaps = 2/78 (2%)

Query: 32  ALVYREGHLVSGTLDALIQHIVPTIDYYPDRAYLFAFLLSSRLFIKPHELLGRVIALCDV 91
            L Y + +L+SG+L+ALIQH+VP +DYYPDR Y+F FLLSSRLF+ P+EL+ +V  LC  
Sbjct: 30  GLYYHDNNLLSGSLEALIQHLVPNVDYYPDRTYIFTFLLSSRLFMHPYELMAKVCHLCVE 89

Query: 92  QQKLTDKTPHGKKELIRK 109
            Q+L+D  P+  K  IRK
Sbjct: 90  HQRLSD--PNSDKNQIRK 105


>sp|Q6DHR3|RG1BA_DANRE Ras-GEF domain-containing family member 1B-A OS=Danio rerio
           GN=rasgef1ba PE=2 SV=2
          Length = 514

 Score = 93.6 bits (231), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 42/78 (53%), Positives = 58/78 (74%), Gaps = 2/78 (2%)

Query: 32  ALVYREGHLVSGTLDALIQHIVPTIDYYPDRAYLFAFLLSSRLFIKPHELLGRVIALCDV 91
            L Y + +L+SG+L+ALI+H+VPT+ YYPDR Y+F FLLSSRLF+ P+EL+ +V  LC  
Sbjct: 72  GLYYHDNNLISGSLEALIEHLVPTVAYYPDRTYIFTFLLSSRLFLHPYELMSKVCHLCVD 131

Query: 92  QQKLTDKTPHGKKELIRK 109
           QQ+L+D  P   K  +RK
Sbjct: 132 QQRLSD--PQADKARVRK 147


>sp|Q0VAM2|RGF1B_HUMAN Ras-GEF domain-containing family member 1B OS=Homo sapiens
           GN=RASGEF1B PE=2 SV=2
          Length = 473

 Score = 93.6 bits (231), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 42/78 (53%), Positives = 57/78 (73%), Gaps = 2/78 (2%)

Query: 32  ALVYREGHLVSGTLDALIQHIVPTIDYYPDRAYLFAFLLSSRLFIKPHELLGRVIALCDV 91
            L Y + +L+SG+L+ALIQH+VP +DYYPDR Y+F FLLSSRLF+ P+EL+ +V  LC  
Sbjct: 30  GLYYHDNNLLSGSLEALIQHLVPNVDYYPDRTYIFTFLLSSRLFMHPYELMAKVCHLCVE 89

Query: 92  QQKLTDKTPHGKKELIRK 109
            Q+L+D  P   K  +RK
Sbjct: 90  HQRLSD--PDSDKNQMRK 105


>sp|Q5RC04|RGF1B_PONAB Ras-GEF domain-containing family member 1B OS=Pongo abelii
           GN=RASGEF1B PE=2 SV=2
          Length = 472

 Score = 93.6 bits (231), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 42/78 (53%), Positives = 57/78 (73%), Gaps = 2/78 (2%)

Query: 32  ALVYREGHLVSGTLDALIQHIVPTIDYYPDRAYLFAFLLSSRLFIKPHELLGRVIALCDV 91
            L Y + +L+SG+L+ALIQH+VP +DYYPDR Y+F FLLSSRLF+ P+EL+ +V  LC  
Sbjct: 30  GLYYHDNNLLSGSLEALIQHLVPNVDYYPDRTYIFTFLLSSRLFMHPYELMAKVCHLCVE 89

Query: 92  QQKLTDKTPHGKKELIRK 109
            Q+L+D  P   K  +RK
Sbjct: 90  HQRLSD--PDSDKNQMRK 105


>sp|Q8N9B8|RGF1A_HUMAN Ras-GEF domain-containing family member 1A OS=Homo sapiens
           GN=RASGEF1A PE=2 SV=2
          Length = 481

 Score = 92.8 bits (229), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 38/72 (52%), Positives = 57/72 (79%)

Query: 33  LVYREGHLVSGTLDALIQHIVPTIDYYPDRAYLFAFLLSSRLFIKPHELLGRVIALCDVQ 92
           L++++GHL+SG+L+AL++H+VPT+DYYPDR Y+F FLLSSR+F+ PH+LL RV  +C  Q
Sbjct: 38  LIFQDGHLISGSLEALMEHLVPTVDYYPDRTYIFTFLLSSRVFMPPHDLLARVGQICVEQ 97

Query: 93  QKLTDKTPHGKK 104
           ++  +  P   K
Sbjct: 98  KQQLEAGPEKAK 109


>sp|Q28EC1|RGF1B_XENTR Ras-GEF domain-containing family member 1B OS=Xenopus tropicalis
           GN=rasgef1b PE=2 SV=1
          Length = 472

 Score = 92.8 bits (229), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 43/77 (55%), Positives = 57/77 (74%), Gaps = 2/77 (2%)

Query: 33  LVYREGHLVSGTLDALIQHIVPTIDYYPDRAYLFAFLLSSRLFIKPHELLGRVIALCDVQ 92
           L Y++ +L+SG+L+ALIQH+VP +DYYPDR Y+F FLLSSRLFI P EL+ RV  +C  Q
Sbjct: 31  LYYQDNNLLSGSLEALIQHLVPNVDYYPDRTYIFTFLLSSRLFIHPSELMARVCHVCMEQ 90

Query: 93  QKLTDKTPHGKKELIRK 109
           Q+L +  P   K  +RK
Sbjct: 91  QRLNE--PGLDKSQVRK 105


>sp|Q8JZL7|RGF1B_MOUSE Ras-GEF domain-containing family member 1B OS=Mus musculus
           GN=Rasgef1b PE=1 SV=1
          Length = 473

 Score = 90.9 bits (224), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 41/78 (52%), Positives = 57/78 (73%), Gaps = 2/78 (2%)

Query: 32  ALVYREGHLVSGTLDALIQHIVPTIDYYPDRAYLFAFLLSSRLFIKPHELLGRVIALCDV 91
            L Y + +L+SG+L+ALIQH+VP +DYYPDR Y+F FLLSSRLF+ P+EL+ +V  LC  
Sbjct: 30  GLYYHDNNLLSGSLEALIQHLVPNVDYYPDRTYIFTFLLSSRLFMHPYELMAKVCHLCVE 89

Query: 92  QQKLTDKTPHGKKELIRK 109
            Q+L++    G K  +RK
Sbjct: 90  HQRLSEG--DGDKNQMRK 105


>sp|Q9D300|RGF1C_MOUSE Ras-GEF domain-containing family member 1C OS=Mus musculus
           GN=Rasgef1c PE=2 SV=1
          Length = 466

 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 45/78 (57%), Positives = 55/78 (70%), Gaps = 2/78 (2%)

Query: 37  EGHLVSGTLDALIQHIVPTIDYYPDRAYLFAFLLSSRLFIKPHELLGRVIALCDVQQKLT 96
           +G   S +LD LIQH+VPT DYYP++AY+F FLLSSRLFI+P ELL RV  LC  QQ+L 
Sbjct: 35  DGAPSSASLDTLIQHLVPTADYYPEKAYIFTFLLSSRLFIEPRELLARVCHLCIEQQQL- 93

Query: 97  DKTPHGKKELIRKYKYNL 114
           DK P   K  +RK+   L
Sbjct: 94  DK-PVLDKARVRKFGAKL 110


>sp|Q6DBW1|RG1BB_DANRE Ras-GEF domain-containing family member 1B-B OS=Danio rerio
           GN=rasgef1bb PE=2 SV=1
          Length = 475

 Score = 83.2 bits (204), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 42/77 (54%), Positives = 54/77 (70%), Gaps = 2/77 (2%)

Query: 32  ALVYREGHLVSGTLDALIQHIVPTIDYYPDRAYLFAFLLSSRLFIKPHELLGRVIALCDV 91
            L YR+  LVSG+L+ALIQ +VPT+DYYPDR+Y+F FLLSSRLF+ P EL+ RV  L   
Sbjct: 32  GLHYRDNKLVSGSLEALIQLLVPTVDYYPDRSYIFTFLLSSRLFLNPFELMSRVCYLGVD 91

Query: 92  QQKLTDKTPHGKKELIR 108
             ++ D  P   K+ IR
Sbjct: 92  HHRVGD--PQMDKKRIR 106


>sp|Q95KH6|RGF1C_MACFA Ras-GEF domain-containing family member 1C OS=Macaca fascicularis
           GN=RASGEF1C PE=2 SV=1
          Length = 466

 Score = 82.0 bits (201), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 44/78 (56%), Positives = 55/78 (70%), Gaps = 2/78 (2%)

Query: 37  EGHLVSGTLDALIQHIVPTIDYYPDRAYLFAFLLSSRLFIKPHELLGRVIALCDVQQKLT 96
           +G   S +L+ LIQH+VPT DYYP++AY+F FLLSSRLFI+P ELL RV  LC  QQ+L 
Sbjct: 35  DGAPSSASLETLIQHLVPTADYYPEKAYIFTFLLSSRLFIEPRELLARVCHLCIEQQQL- 93

Query: 97  DKTPHGKKELIRKYKYNL 114
           DK P   K  +RK+   L
Sbjct: 94  DK-PVLDKARVRKFGPKL 110


>sp|Q8N431|RGF1C_HUMAN Ras-GEF domain-containing family member 1C OS=Homo sapiens
           GN=RASGEF1C PE=2 SV=2
          Length = 466

 Score = 82.0 bits (201), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 44/78 (56%), Positives = 55/78 (70%), Gaps = 2/78 (2%)

Query: 37  EGHLVSGTLDALIQHIVPTIDYYPDRAYLFAFLLSSRLFIKPHELLGRVIALCDVQQKLT 96
           +G   S +L+ LIQH+VPT DYYP++AY+F FLLSSRLFI+P ELL RV  LC  QQ+L 
Sbjct: 35  DGAPSSASLETLIQHLVPTADYYPEKAYIFTFLLSSRLFIEPRELLARVCHLCIEQQQL- 93

Query: 97  DKTPHGKKELIRKYKYNL 114
           DK P   K  +RK+   L
Sbjct: 94  DK-PVLDKARVRKFGPKL 110


>sp|A0JM95|RGF1A_XENTR Ras-GEF domain-containing family member 1A OS=Xenopus tropicalis
           GN=rasgef1a PE=2 SV=1
          Length = 475

 Score = 81.3 bits (199), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 34/77 (44%), Positives = 55/77 (71%)

Query: 34  VYREGHLVSGTLDALIQHIVPTIDYYPDRAYLFAFLLSSRLFIKPHELLGRVIALCDVQQ 93
           VY++G LVSG+L+ LI+ +VPT+DYYPD+ Y+F FLLS+R+FI P+E+L +V  +C  Q+
Sbjct: 31  VYQDGSLVSGSLEVLIERLVPTLDYYPDKTYIFTFLLSARIFIHPYEILAKVGQMCIKQK 90

Query: 94  KLTDKTPHGKKELIRKY 110
           +  +      K  ++ +
Sbjct: 91  QQLESGSEADKAKLKSF 107


>sp|O15211|RGL2_HUMAN Ral guanine nucleotide dissociation stimulator-like 2 OS=Homo
           sapiens GN=RGL2 PE=1 SV=1
          Length = 777

 Score = 33.9 bits (76), Expect = 0.31,   Method: Composition-based stats.
 Identities = 17/44 (38%), Positives = 27/44 (61%)

Query: 40  LVSGTLDALIQHIVPTIDYYPDRAYLFAFLLSSRLFIKPHELLG 83
           L +GTL+AL++H++ T     D +++ AFL + R F     LLG
Sbjct: 92  LRAGTLEALVRHLLDTRTSGTDVSFMSAFLATHRAFTSTPALLG 135


>sp|P55827|RS3_AGGAC 30S ribosomal protein S3 OS=Aggregatibacter actinomycetemcomitans
           GN=rpsC PE=3 SV=2
          Length = 235

 Score = 32.7 bits (73), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 13/79 (16%)

Query: 28  RRSWALVYREGHLVSGTLDALIQHIVPTIDYYPDRAYLFAFLLSSRLFIKPHELLGRVIA 87
           R  W   YREG +   TL A        IDY    A+    ++  +++I   E+LG + A
Sbjct: 164 RSEW---YREGRVPLHTLRA-------DIDYNTAEAHTTYGVIGVKVWIFKGEILGGMAA 213

Query: 88  LCDVQQKLTD---KTPHGK 103
           L   +Q+ TD   K P GK
Sbjct: 214 LAQPEQQPTDKPKKVPRGK 232


>sp|Q55EC7|GEFX_DICDI RasGEF domain-containing serine/threonine-protein kinase X
           OS=Dictyostelium discoideum GN=gefX PE=2 SV=1
          Length = 960

 Score = 32.0 bits (71), Expect = 1.2,   Method: Composition-based stats.
 Identities = 25/74 (33%), Positives = 32/74 (43%), Gaps = 17/74 (22%)

Query: 31  WALVYREGHLVSGTLD--------ALIQHIVPTI-----DYYPDRAYLFAFLLSSRLFIK 77
           W +  +  H+   TL         AL  HI   I     DYY D +Y+  FLL+ R F  
Sbjct: 417 WKIAAKPKHVGYQTLKRKQGPCYAALTSHITKMIERATSDYYYDTSYIQDFLLAYRCFAP 476

Query: 78  PHE----LLGRVIA 87
           P +    LL R IA
Sbjct: 477 PQQIFELLLSRYIA 490


>sp|P27866|SYA_RHIME Alanine--tRNA ligase OS=Rhizobium meliloti (strain 1021) GN=alaS
           PE=3 SV=2
          Length = 887

 Score = 30.8 bits (68), Expect = 2.4,   Method: Composition-based stats.
 Identities = 15/37 (40%), Positives = 25/37 (67%)

Query: 70  LSSRLFIKPHELLGRVIALCDVQQKLTDKTPHGKKEL 106
           L++ L ++P ++LGRV AL D ++KL  +    KK+L
Sbjct: 727 LAAALKVQPADVLGRVEALLDERRKLERELTEAKKKL 763


>sp|Q5TJE5|RGL2_CANFA Ral guanine nucleotide dissociation stimulator-like 2 OS=Canis
           familiaris GN=RGL2 PE=3 SV=1
          Length = 780

 Score = 30.4 bits (67), Expect = 3.8,   Method: Composition-based stats.
 Identities = 17/46 (36%), Positives = 25/46 (54%)

Query: 40  LVSGTLDALIQHIVPTIDYYPDRAYLFAFLLSSRLFIKPHELLGRV 85
           L +GTL+AL++H++       D  +  AFL + R F     LLG V
Sbjct: 93  LRAGTLEALVRHLLDARTSGADVTFTPAFLATHRAFTSTPALLGLV 138


>sp|A6U9N4|SYA_SINMW Alanine--tRNA ligase OS=Sinorhizobium medicae (strain WSM419)
           GN=alaS PE=3 SV=1
          Length = 887

 Score = 30.0 bits (66), Expect = 4.4,   Method: Composition-based stats.
 Identities = 14/37 (37%), Positives = 25/37 (67%)

Query: 70  LSSRLFIKPHELLGRVIALCDVQQKLTDKTPHGKKEL 106
           L++ L ++P ++LGRV +L D ++KL  +    KK+L
Sbjct: 727 LAAALKVQPSDVLGRVESLLDERRKLERELTEAKKKL 763


>sp|Q9CL37|RS3_PASMU 30S ribosomal protein S3 OS=Pasteurella multocida (strain Pm70)
           GN=rpsC PE=3 SV=1
          Length = 235

 Score = 30.0 bits (66), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 13/79 (16%)

Query: 28  RRSWALVYREGHLVSGTLDALIQHIVPTIDYYPDRAYLFAFLLSSRLFIKPHELLGRVIA 87
           R  W   YREG +   TL A        IDY    A+    ++  +++I   E+LG + A
Sbjct: 164 RSEW---YREGRVPLHTLRA-------DIDYNTAEAHTTYGVIGIKVWIFKGEILGGMAA 213

Query: 88  LCDVQQKLTD---KTPHGK 103
           +   +Q+  D   K P GK
Sbjct: 214 IAQPEQQPADKPKKAPRGK 232


>sp|Q03386|GNDS_RAT Ral guanine nucleotide dissociation stimulator OS=Rattus norvegicus
           GN=Ralgds PE=1 SV=1
          Length = 895

 Score = 29.6 bits (65), Expect = 5.0,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 1/41 (2%)

Query: 42  SGTLDALIQHIVPTIDYYPDRAYLFAFLLSSRLFIKPHELL 82
           +GTL+ L++H+VP      D +Y+  FL + R F    ++L
Sbjct: 118 AGTLEKLVEHLVPAFQ-GSDLSYVTVFLCTYRAFTTTQQVL 157


>sp|Q03385|GNDS_MOUSE Ral guanine nucleotide dissociation stimulator OS=Mus musculus
           GN=Ralgds PE=1 SV=2
          Length = 852

 Score = 29.6 bits (65), Expect = 5.0,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 1/41 (2%)

Query: 42  SGTLDALIQHIVPTIDYYPDRAYLFAFLLSSRLFIKPHELL 82
           +GTL+ L++H+VP      D +Y+  FL + R F    ++L
Sbjct: 63  AGTLEKLVEHLVPAFQ-GSDLSYVTVFLCTYRAFTTTQQVL 102


>sp|A0JXT5|RNH2_ARTS2 Ribonuclease HII OS=Arthrobacter sp. (strain FB24) GN=rnhB PE=3
           SV=1
          Length = 221

 Score = 29.6 bits (65), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 17/62 (27%), Positives = 34/62 (54%), Gaps = 2/62 (3%)

Query: 4   PYIIRLVKEEEDEEENERKRRRRRRRSWALVYREGHLVSGTLDALIQHIVPTIDYYPDRA 63
           P ++  V++ +  +E++R+R     R+W++    GH  +G +DAL   I+  +     RA
Sbjct: 48  PVLLDDVRDSKLLKESDRERLEPLVRNWSVASAVGHASAGEIDAL--GIIAALRTAGTRA 105

Query: 64  YL 65
           +L
Sbjct: 106 WL 107


>sp|P75608|Y085_MYCPN Uncharacterized protein MPN_085 OS=Mycoplasma pneumoniae (strain
           ATCC 29342 / M129) GN=MPN_085 PE=4 SV=1
          Length = 440

 Score = 29.6 bits (65), Expect = 6.2,   Method: Composition-based stats.
 Identities = 28/90 (31%), Positives = 39/90 (43%), Gaps = 5/90 (5%)

Query: 4   PYIIRLVKEEEDEEENERKRRRRRRRSWALVYREGHLVSGTLDALIQHIVPTIDYYPDRA 63
           P +I L+     E   +  R      S+A  Y E   +   +  L+  I+PTI       
Sbjct: 171 PNLIALINNRLSEILPDGNRYFLGHSSFAFHYYE---IVSRIPFLVFFIIPTITLITLGC 227

Query: 64  YLFAFL--LSSRLFIKPHELLGRVIALCDV 91
           YLFA+L  ++S    KP   L  VI L DV
Sbjct: 228 YLFAYLRFINSNKLRKPLSTLSIVIMLTDV 257


>sp|Q9USU1|EFC25_SCHPO Ras guanine nucleotide exchange factor efc25 OS=Schizosaccharomyces
           pombe (strain 972 / ATCC 24843) GN=efc25 PE=1 SV=1
          Length = 987

 Score = 29.6 bits (65), Expect = 6.4,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 2/56 (3%)

Query: 33  LVYREGHLVSGTLDALIQHIVPTIDYYPDRAYLFAFLLSSRLFIKPHELLGRVIAL 88
           +V  + ++  GTL AL+ ++V  +    D  +  +FLL+ + F  P EL   ++ L
Sbjct: 587 VVQSDNNVKGGTLPALVHYLVQNVHLNKD--FRHSFLLTYKTFTTPQELFTLLVIL 640


>sp|Q07889|SOS1_HUMAN Son of sevenless homolog 1 OS=Homo sapiens GN=SOS1 PE=1 SV=1
          Length = 1333

 Score = 29.3 bits (64), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 2/45 (4%)

Query: 42  SGTLDALIQHIVPTIDYYPDRAYLFAFLLSSRLFIKPHELLGRVI 86
           +GT+  LI+ +  T   Y D  ++  FL + R F KP ELL  +I
Sbjct: 603 AGTVIKLIERL--TYHMYADPNFVRTFLTTYRSFCKPQELLSLII 645


>sp|Q12967|GNDS_HUMAN Ral guanine nucleotide dissociation stimulator OS=Homo sapiens
           GN=RALGDS PE=1 SV=2
          Length = 914

 Score = 29.3 bits (64), Expect = 6.9,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 1/41 (2%)

Query: 42  SGTLDALIQHIVPTIDYYPDRAYLFAFLLSSRLFIKPHELL 82
           +GTL+ L++H+VP      D +Y+  FL + R F    ++L
Sbjct: 118 AGTLEKLVEHLVPAFQ-GSDLSYVTIFLCTYRAFTTTQQVL 157


>sp|Q07890|SOS2_HUMAN Son of sevenless homolog 2 OS=Homo sapiens GN=SOS2 PE=1 SV=2
          Length = 1332

 Score = 28.9 bits (63), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 9/84 (10%)

Query: 3   TPYIIRLVKEEEDEEENERKRRRRRRRSWALVYREGHLVSGTLDALIQHIVPTIDYYPDR 62
           +P + R V +  D EEN       + RS   + +      GT+  LI+ +  T   Y D 
Sbjct: 569 SPEVYRFVVK--DSEENIVFEDNLQSRSGIPIIK-----GGTVVKLIERL--TYHMYADP 619

Query: 63  AYLFAFLLSSRLFIKPHELLGRVI 86
            ++  FL + R F KP ELL  +I
Sbjct: 620 NFVRTFLTTYRSFCKPQELLSLLI 643


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.327    0.144    0.428 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,583,747
Number of Sequences: 539616
Number of extensions: 1809826
Number of successful extensions: 13674
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 13553
Number of HSP's gapped (non-prelim): 96
length of query: 120
length of database: 191,569,459
effective HSP length: 87
effective length of query: 33
effective length of database: 144,622,867
effective search space: 4772554611
effective search space used: 4772554611
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 55 (25.8 bits)