BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3930
(299 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|189235300|ref|XP_974730.2| PREDICTED: similar to multi-sex-combs [Tribolium castaneum]
gi|270004171|gb|EFA00619.1| hypothetical protein TcasGA2_TC003495 [Tribolium castaneum]
Length = 504
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 91/176 (51%), Positives = 132/176 (75%), Gaps = 3/176 (1%)
Query: 80 METEASDNVDKDLSDLQRKDGGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQES 139
ME E +N + + +K GRHRKKQLY I+ MEFY SDSNL KDRF SQL++E+
Sbjct: 1 MENETKENANAHDDSILKK---GRHRKKQLYNSILQQMEFYFSDSNLTKDRFLSQLIKEN 57
Query: 140 PEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTI 199
P ++++VFLK NK+ +LT DD+ KA++KS+L+E++ED +++RRT V++K +VD+CTI
Sbjct: 58 PFVDLNVFLKFNKITKLTTSIDDIQKAVQKSQLIELSEDRSRIRRTKPVKEKANVDDCTI 117
Query: 200 YVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKAL 255
YVE+L +A H+++ SVFS++G V YVS+PK+K+ +KGFAFVEF ++EA AL
Sbjct: 118 YVERLKSDATHEWLNSVFSEFGNVVYVSIPKYKNNSAIKGFAFVEFEKEKEAQNAL 173
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 56/67 (83%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEVT 60
MEFY SDSNL KDRF SQL++E+P ++++VFLK NK+ +LT DD+ KA++KS+L+E++
Sbjct: 35 MEFYFSDSNLTKDRFLSQLIKENPFVDLNVFLKFNKITKLTTSIDDIQKAVQKSQLIELS 94
Query: 61 EDGTKVK 67
ED ++++
Sbjct: 95 EDRSRIR 101
>gi|242024527|ref|XP_002432679.1| lupus la ribonucleoprotein, putative [Pediculus humanus corporis]
gi|212518149|gb|EEB19941.1| lupus la ribonucleoprotein, putative [Pediculus humanus corporis]
Length = 527
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 87/154 (56%), Positives = 119/154 (77%)
Query: 103 RHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDD 162
R RKKQLY+ I MEFY SDSNL+KDRF SQL+++ PE+++ +FLK NK+ +LT D
Sbjct: 21 RRRKKQLYELIRERMEFYFSDSNLQKDRFLSQLIKDDPEVDLEIFLKFNKIHQLTTSLHD 80
Query: 163 VVKALRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGK 222
+ KAL+KS+ L +TED +KV R V++K +VD CTIYVE+L +A+HD+++ +FS+YGK
Sbjct: 81 LKKALKKSQFLSLTEDKSKVFRNTPVKEKLNVDACTIYVEQLSYDADHDWLKLIFSRYGK 140
Query: 223 VTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
V Y+S+PK+K TGK+KGFAFVEF T E A AL+
Sbjct: 141 VDYISIPKYKGTGKIKGFAFVEFETPESAKAALD 174
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 52/66 (78%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEVT 60
MEFY SDSNL+KDRF SQL+++ PE+++ +FLK NK+ +LT D+ KAL+KS+ L +T
Sbjct: 35 MEFYFSDSNLQKDRFLSQLIKDDPEVDLEIFLKFNKIHQLTTSLHDLKKALKKSQFLSLT 94
Query: 61 EDGTKV 66
ED +KV
Sbjct: 95 EDKSKV 100
>gi|383859770|ref|XP_003705365.1| PREDICTED: uncharacterized protein LOC100883293 [Megachile
rotundata]
Length = 612
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 79/156 (50%), Positives = 114/156 (73%)
Query: 100 GGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHD 159
G R RKK L+ I+ MEFY SD+NL KDRF S L++E P +++ +F++CNK+ LT D
Sbjct: 43 GKPRLRKKALHAAILKQMEFYFSDANLNKDRFLSNLIKEDPYVDLMIFMRCNKIRELTTD 102
Query: 160 PDDVVKALRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSK 219
+ V KAL+ S +L +++DGTKV R + K ++D+CT+YV+ LPP+A+H+ + ++FS+
Sbjct: 103 VNRVTKALQASTILSLSKDGTKVCRVTPIVQKENIDDCTVYVQNLPPDADHEMLSTIFSQ 162
Query: 220 YGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKAL 255
YG+V YVS+PKFK K+KGFAFVEF+ EEA K L
Sbjct: 163 YGQVVYVSVPKFKINKKIKGFAFVEFNAPEEANKCL 198
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 50/66 (75%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEVT 60
MEFY SD+NL KDRF S L++E P +++ +F++CNK+ LT D + V KAL+ S +L ++
Sbjct: 60 MEFYFSDANLNKDRFLSNLIKEDPYVDLMIFMRCNKIRELTTDVNRVTKALQASTILSLS 119
Query: 61 EDGTKV 66
+DGTKV
Sbjct: 120 KDGTKV 125
>gi|307212601|gb|EFN88316.1| La-related protein 7 [Harpegnathos saltator]
Length = 625
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 84/160 (52%), Positives = 115/160 (71%), Gaps = 3/160 (1%)
Query: 100 GGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHD 159
G R RKK L+ I+ MEFY SD+NL KDR+ S+LL++SP + + VF NKL+ LT D
Sbjct: 41 GKPRLRKKALHAAILKQMEFYFSDANLSKDRYLSELLKKSPYVALDVFTNFNKLSTLTTD 100
Query: 160 PDDVVKALRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSK 219
+ + KAL KS +L+V+EDGTKV R + K ++DECT+YV+ LPP+++HD++ S FSK
Sbjct: 101 TNRIAKALEKSTMLKVSEDGTKVCRLTPINKKENIDECTVYVQNLPPDSDHDWLISAFSK 160
Query: 220 YGKVTYVSLPKFKSTGKLKGFAFVEFST---KEEAAKALE 256
YGKV YVS+P+++S K+KGFAFVEF T EE KA +
Sbjct: 161 YGKVVYVSIPRYQSNKKIKGFAFVEFDTPAGAEECIKAFQ 200
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 50/66 (75%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEVT 60
MEFY SD+NL KDR+ S+LL++SP + + VF NKL+ LT D + + KAL KS +L+V+
Sbjct: 58 MEFYFSDANLSKDRYLSELLKKSPYVALDVFTNFNKLSTLTTDTNRIAKALEKSTMLKVS 117
Query: 61 EDGTKV 66
EDGTKV
Sbjct: 118 EDGTKV 123
>gi|380025220|ref|XP_003696375.1| PREDICTED: la-related protein 7-like [Apis florea]
Length = 609
Score = 173 bits (439), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 77/156 (49%), Positives = 113/156 (72%)
Query: 100 GGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHD 159
G R RKK L+ I+ MEFY SD+NL KDRF S LL+E P I+++VFL N++ LT D
Sbjct: 43 GKPRLRKKALHAAILKQMEFYFSDANLSKDRFLSNLLKEDPYIDLNVFLSFNRIKELTTD 102
Query: 160 PDDVVKALRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSK 219
+ + KA+ SK+L ++EDGTK+RR + + ++DECT+YV+ LPP+++H+ + S+FS+
Sbjct: 103 SNRIAKAVETSKMLSLSEDGTKIRRITPIISRENIDECTVYVQNLPPDSDHETLSSIFSQ 162
Query: 220 YGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKAL 255
YG+V Y+S+P+FK+ K+KGFAFVEF + A K L
Sbjct: 163 YGQVVYISIPRFKNNKKIKGFAFVEFDIPQSAKKCL 198
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 50/67 (74%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEVT 60
MEFY SD+NL KDRF S LL+E P I+++VFL N++ LT D + + KA+ SK+L ++
Sbjct: 60 MEFYFSDANLSKDRFLSNLLKEDPYIDLNVFLSFNRIKELTTDSNRIAKAVETSKMLSLS 119
Query: 61 EDGTKVK 67
EDGTK++
Sbjct: 120 EDGTKIR 126
>gi|345492037|ref|XP_001600355.2| PREDICTED: la-related protein 7-like [Nasonia vitripennis]
Length = 638
Score = 173 bits (438), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 87/185 (47%), Positives = 123/185 (66%), Gaps = 5/185 (2%)
Query: 76 VPISMETEASDNVDKDLSDLQRK-----DGGGRHRKKQLYQQIMNLMEFYLSDSNLRKDR 130
VP + E V KD ++ +K G R RKK + I+ MEFY DSNL KDR
Sbjct: 19 VPQVHQPEVEAPVPKDTNETNQKANDIPHGKPRLRKKAFHAAILKQMEFYFGDSNLSKDR 78
Query: 131 FFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEVTEDGTKVRRTVVVQD 190
F S+L++E P++ + F+K NK+ LT D + KAL KS +L+V+E+G VRR + +
Sbjct: 79 FLSELIKECPDVPLDTFIKFNKIRSLTTDIGRIAKALSKSTMLQVSENGKTVRRITPIVE 138
Query: 191 KPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEE 250
K ++DECT+YV++LP +A+H+++ S+FS+YG V YVS+PKFK+T K+KGFAFVEF T E
Sbjct: 139 KQNIDECTVYVQRLPSDADHEWLSSLFSEYGPVAYVSIPKFKATQKIKGFAFVEFETPEG 198
Query: 251 AAKAL 255
A K L
Sbjct: 199 AKKCL 203
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 47/67 (70%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEVT 60
MEFY DSNL KDRF S+L++E P++ + F+K NK+ LT D + KAL KS +L+V+
Sbjct: 65 MEFYFGDSNLSKDRFLSELIKECPDVPLDTFIKFNKIRSLTTDIGRIAKALSKSTMLQVS 124
Query: 61 EDGTKVK 67
E+G V+
Sbjct: 125 ENGKTVR 131
>gi|328790716|ref|XP_001120336.2| PREDICTED: la-related protein 7-like [Apis mellifera]
Length = 624
Score = 173 bits (438), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 77/156 (49%), Positives = 113/156 (72%)
Query: 100 GGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHD 159
G R RKK L+ I+ MEFY SD+NL KDRF S LL+E P I+++VFL N++ LT D
Sbjct: 43 GKPRLRKKALHAAILKQMEFYFSDANLSKDRFLSNLLKEDPYIDLNVFLSFNRIKELTTD 102
Query: 160 PDDVVKALRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSK 219
+ + KA+ SK+L ++EDGTK+RR + + ++DECT+YV+ LPP+++H+ + S+FS+
Sbjct: 103 SNRIAKAVETSKMLSLSEDGTKIRRITPIISRENIDECTVYVQNLPPDSDHETLSSIFSQ 162
Query: 220 YGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKAL 255
YG+V Y+S+P+FK+ K+KGFAFVEF + A K L
Sbjct: 163 YGQVVYISIPRFKNNKKIKGFAFVEFDIPQSAKKCL 198
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 50/67 (74%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEVT 60
MEFY SD+NL KDRF S LL+E P I+++VFL N++ LT D + + KA+ SK+L ++
Sbjct: 60 MEFYFSDANLSKDRFLSNLLKEDPYIDLNVFLSFNRIKELTTDSNRIAKAVETSKMLSLS 119
Query: 61 EDGTKVK 67
EDGTK++
Sbjct: 120 EDGTKIR 126
>gi|322795732|gb|EFZ18411.1| hypothetical protein SINV_08003 [Solenopsis invicta]
Length = 764
Score = 173 bits (438), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 87/161 (54%), Positives = 114/161 (70%), Gaps = 5/161 (3%)
Query: 100 GGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHD 159
G R RKK L+ I MEFY SDSNL KDRF S+LL+E+ I++ VF KCNKL LT D
Sbjct: 38 GKPRLRKKALHALIRKQMEFYFSDSNLSKDRFLSKLLKENSYIDLEVFTKCNKLQELTTD 97
Query: 160 -----PDDVVKALRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIE 214
+ + KAL+ S +L+V+EDGTKV R +Q K +VD+CTIYV+ LPP+A+H+++
Sbjct: 98 EHMITTNRIAKALQGSTMLKVSEDGTKVCRVTPIQTKENVDQCTIYVQNLPPDADHEWLI 157
Query: 215 SVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKAL 255
SVFSKYG V YVS+P++K+ K+KGFAFVEF T A + L
Sbjct: 158 SVFSKYGTVDYVSIPRYKNNRKIKGFAFVEFDTPNHAQECL 198
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 51/71 (71%), Gaps = 5/71 (7%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHD-----PDDVVKALRKSK 55
MEFY SDSNL KDRF S+LL+E+ I++ VF KCNKL LT D + + KAL+ S
Sbjct: 55 MEFYFSDSNLSKDRFLSKLLKENSYIDLEVFTKCNKLQELTTDEHMITTNRIAKALQGST 114
Query: 56 LLEVTEDGTKV 66
+L+V+EDGTKV
Sbjct: 115 MLKVSEDGTKV 125
>gi|332026973|gb|EGI67069.1| La-related protein 7 [Acromyrmex echinatior]
Length = 835
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 84/159 (52%), Positives = 115/159 (72%), Gaps = 3/159 (1%)
Query: 100 GGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHD 159
G R RKK L+ I+ MEFY SD+NL KDR+ S LL+E+P +++ VF + NKL LT D
Sbjct: 39 GKPRLRKKALHASILKQMEFYFSDANLNKDRYLSGLLKENPYVDLEVFTRFNKLRELTTD 98
Query: 160 PDDVVKALRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSK 219
+ + KAL+ S +L+V+EDGTKV R +Q K D+D+CTIYV+ LPP+A+HD++ S+FSK
Sbjct: 99 INRIAKALQGSTMLKVSEDGTKVCRLTPIQKKRDIDQCTIYVQNLPPDADHDWLISIFSK 158
Query: 220 YGKVTYVSLPKFKSTGKLKGFAFVEF---STKEEAAKAL 255
YG V YVS+P+++S K+KGFAFVEF S+ EE K
Sbjct: 159 YGLVEYVSIPRYRSNRKIKGFAFVEFDKPSSAEECIKTF 197
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 50/66 (75%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEVT 60
MEFY SD+NL KDR+ S LL+E+P +++ VF + NKL LT D + + KAL+ S +L+V+
Sbjct: 56 MEFYFSDANLNKDRYLSGLLKENPYVDLEVFTRFNKLRELTTDINRIAKALQGSTMLKVS 115
Query: 61 EDGTKV 66
EDGTKV
Sbjct: 116 EDGTKV 121
>gi|340727580|ref|XP_003402119.1| PREDICTED: LOW QUALITY PROTEIN: la-related protein 7-like [Bombus
terrestris]
Length = 597
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 80/156 (51%), Positives = 112/156 (71%)
Query: 100 GGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHD 159
G R RKK L+ I+ MEFY SD+NL KDRF S L++E P +++SVFLK NK+ LT D
Sbjct: 43 GKPRLRKKALHAAILKQMEFYFSDANLSKDRFLSNLVKEDPYVDLSVFLKFNKIRELTTD 102
Query: 160 PDDVVKALRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSK 219
+ + K ++ S +L ++EDG KVRR + K + DECT+YV+ LPP+A+H+ + S+FS+
Sbjct: 103 INRISKGIQASTILSLSEDGMKVRRITPIVPKENTDECTVYVQNLPPDADHETLSSIFSQ 162
Query: 220 YGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKAL 255
YG+V YVS+P+FK+ K+KGFAFVEF+T E A L
Sbjct: 163 YGQVVYVSIPRFKNNKKIKGFAFVEFNTIESAKNCL 198
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 49/67 (73%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEVT 60
MEFY SD+NL KDRF S L++E P +++SVFLK NK+ LT D + + K ++ S +L ++
Sbjct: 60 MEFYFSDANLSKDRFLSNLVKEDPYVDLSVFLKFNKIRELTTDINRISKGIQASTILSLS 119
Query: 61 EDGTKVK 67
EDG KV+
Sbjct: 120 EDGMKVR 126
>gi|350412122|ref|XP_003489548.1| PREDICTED: la-related protein 7-like [Bombus impatiens]
Length = 595
Score = 170 bits (431), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 79/156 (50%), Positives = 110/156 (70%)
Query: 100 GGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHD 159
G R RKK L+ I+ MEFY SD+NL KDRF S L++E P +++SVFLK NK+ LT D
Sbjct: 43 GKPRLRKKALHAAILKQMEFYFSDANLSKDRFLSNLVKEDPYVDLSVFLKFNKIRELTTD 102
Query: 160 PDDVVKALRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSK 219
+ + K ++ S +L ++EDG KVRR + K + DECT+YV+ LPP+ +H+ + S+FS+
Sbjct: 103 INRISKGVQASTILSLSEDGMKVRRITPIAQKENTDECTVYVQNLPPDTDHETLSSIFSQ 162
Query: 220 YGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKAL 255
YG+V YVS+P+FK+ K+KGFAFVEF T E A L
Sbjct: 163 YGQVVYVSIPRFKNNKKIKGFAFVEFDTIESAKNCL 198
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 49/67 (73%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEVT 60
MEFY SD+NL KDRF S L++E P +++SVFLK NK+ LT D + + K ++ S +L ++
Sbjct: 60 MEFYFSDANLSKDRFLSNLVKEDPYVDLSVFLKFNKIRELTTDINRISKGVQASTILSLS 119
Query: 61 EDGTKVK 67
EDG KV+
Sbjct: 120 EDGMKVR 126
>gi|158296988|ref|XP_317298.4| AGAP008164-PA [Anopheles gambiae str. PEST]
gi|157014978|gb|EAA12381.4| AGAP008164-PA [Anopheles gambiae str. PEST]
Length = 559
Score = 167 bits (422), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 86/178 (48%), Positives = 114/178 (64%), Gaps = 1/178 (0%)
Query: 79 SMETEASDNVDKDLS-DLQRKDGGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQ 137
SME++ N KD D GRHR K + I +EFY SD+NL KDR+ QLL+
Sbjct: 1 SMESQEKPNAGKDAEKDKAVTKAKGRHRSKHKFNSIRKQIEFYFSDANLTKDRYMGQLLR 60
Query: 138 ESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEVTEDGTKVRRTVVVQDKPDVDEC 197
P I + FLK NK+ LT + D++ AL+ S LLE+++D KVRR V K + +EC
Sbjct: 61 NGPFIPLEEFLKFNKIKALTTNVDEIANALKNSTLLELSDDRAKVRRKTEVVVKANSEEC 120
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKAL 255
TIYVE LPP+A+HD++ +VFS YG V YVSLPKF+++GK+K F FVEF + KAL
Sbjct: 121 TIYVESLPPKADHDWVRNVFSSYGTVAYVSLPKFRNSGKIKEFGFVEFDEEASVQKAL 178
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 46/67 (68%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEVT 60
+EFY SD+NL KDR+ QLL+ P I + FLK NK+ LT + D++ AL+ S LLE++
Sbjct: 40 IEFYFSDANLTKDRYMGQLLRNGPFIPLEEFLKFNKIKALTTNVDEIANALKNSTLLELS 99
Query: 61 EDGTKVK 67
+D KV+
Sbjct: 100 DDRAKVR 106
>gi|328699574|ref|XP_001949188.2| PREDICTED: la-related protein 7-like [Acyrthosiphon pisum]
Length = 540
Score = 167 bits (422), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 79/155 (50%), Positives = 111/155 (71%), Gaps = 3/155 (1%)
Query: 103 RHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDD 162
R RKKQLY + +EFYLSD+NLRKDR+F L+Q S I + FL CNK+ LT +P+D
Sbjct: 25 RKRKKQLYTDLKKQIEFYLSDANLRKDRYFGNLMQTSQCISIDTFLNCNKIKSLTKNPED 84
Query: 163 VVKALRKSKLLEVTEDGTKVRRTVVVQDKP--DVDECTIYVEKLPPEAEHDYIESVFSKY 220
++KA+ S +L V++ + + R +++K DV+ CT+YVE+LPP+A+HD+I+S+F KY
Sbjct: 85 IIKAIENSSVLSVSDCKSNIYRIKPIEEKTPEDVERCTVYVEQLPPKADHDWIKSMFEKY 144
Query: 221 GKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKAL 255
G V Y+SLPKFKS G +K FAF+EF +E A K L
Sbjct: 145 GNVAYISLPKFKS-GTIKRFAFIEFDDEESAIKVL 178
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 54/82 (65%), Gaps = 6/82 (7%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEVT 60
+EFYLSD+NLRKDR+F L+Q S I + FL CNK+ LT +P+D++KA+ S +L V+
Sbjct: 39 IEFYLSDANLRKDRYFGNLMQTSQCISIDTFLNCNKIKSLTKNPEDIIKAIENSSVLSVS 98
Query: 61 EDGTKVKGNIIRHFLVPISMET 82
+ K NI R + PI +T
Sbjct: 99 D----CKSNIYR--IKPIEEKT 114
>gi|357625823|gb|EHJ76129.1| putative multi-sex-combs protein [Danaus plexippus]
Length = 500
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/175 (46%), Positives = 117/175 (66%), Gaps = 8/175 (4%)
Query: 103 RHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDD 162
RHRKKQ+Y+ IM MEFY SD+NL KDRF L++ P + ++ FLK NK+ +T D D
Sbjct: 24 RHRKKQIYENIMKQMEFYFSDANLSKDRFLGDLVKNDPYVPITEFLKFNKIRSMTQDVGD 83
Query: 163 VVKALRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGK 222
+VKA++ S LE++ED TKV R + D D+ TIYVE +P A ++++ VFS YG+
Sbjct: 84 IVKAMKHSTFLELSEDKTKVARKTPMLPY-DADQRTIYVESIPVTASLNWLDRVFSDYGQ 142
Query: 223 VTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKAL----ELG--LNPC-PPDYQSSI 270
V Y+SLPKFK++ K KGFAF+EF++ ++A + ++G L C PP+ SSI
Sbjct: 143 VAYISLPKFKNSQKNKGFAFIEFASPQDAQNCISTFTKMGCKLPSCMPPEELSSI 197
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 46/66 (69%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEVT 60
MEFY SD+NL KDRF L++ P + ++ FLK NK+ +T D D+VKA++ S LE++
Sbjct: 38 MEFYFSDANLSKDRFLGDLVKNDPYVPITEFLKFNKIRSMTQDVGDIVKAMKHSTFLELS 97
Query: 61 EDGTKV 66
ED TKV
Sbjct: 98 EDKTKV 103
>gi|432920030|ref|XP_004079803.1| PREDICTED: la-related protein 7-like [Oryzias latipes]
Length = 520
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 75/162 (46%), Positives = 110/162 (67%), Gaps = 3/162 (1%)
Query: 103 RHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDP 160
R+R KQL + +EF+ D+NL KDRF ++++ES + +++SV N++ +LT DP
Sbjct: 30 RYRVKQLLGDVKKQVEFWFGDANLHKDRFLKKIIEESDDGYVDISVLTGFNRMKKLTTDP 89
Query: 161 DDVVKALRKSKLLEVTEDGTKVRRTVVVQDKP-DVDECTIYVEKLPPEAEHDYIESVFSK 219
+ +AL+ S L+EV +G KVRR + D P + D CT+YVE LP + H +IE VFSK
Sbjct: 90 KLIARALKNSTLVEVNLEGNKVRRQQPLGDPPINSDSCTVYVELLPKDVSHSWIERVFSK 149
Query: 220 YGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNP 261
G VTYVS+P++++TG KGFAFVEF +E+A KA+E+ NP
Sbjct: 150 CGNVTYVSIPRYRTTGDSKGFAFVEFENEEQAQKAIEMLNNP 191
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 47/69 (68%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
+EF+ D+NL KDRF ++++ES + +++SV N++ +LT DP + +AL+ S L+E
Sbjct: 44 VEFWFGDANLHKDRFLKKIIEESDDGYVDISVLTGFNRMKKLTTDPKLIARALKNSTLVE 103
Query: 59 VTEDGTKVK 67
V +G KV+
Sbjct: 104 VNLEGNKVR 112
>gi|346469135|gb|AEO34412.1| hypothetical protein [Amblyomma maculatum]
Length = 476
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 67/142 (47%), Positives = 103/142 (72%), Gaps = 2/142 (1%)
Query: 117 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 174
MEFY SD+NLRKDRF ++L+ E +++ VFL +K+ LT D D+ A+ S LL+
Sbjct: 1 MEFYFSDANLRKDRFMNELVHRDEEGYVDLEVFLTFHKIRALTADVKDIAGAITTSNLLQ 60
Query: 175 VTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKST 234
+ E+ +VRR ++ KPDVDECT+YVE+LPP A+H +++ VFS++G+V YVSLP+++
Sbjct: 61 MDEEHRRVRRCTALETKPDVDECTLYVERLPPHADHAWLKGVFSRHGQVVYVSLPRYRHN 120
Query: 235 GKLKGFAFVEFSTKEEAAKALE 256
++KGFAF+EF+T E+ +A +
Sbjct: 121 NRIKGFAFIEFATAEDVDRACQ 142
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 45/69 (65%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
MEFY SD+NLRKDRF ++L+ E +++ VFL +K+ LT D D+ A+ S LL+
Sbjct: 1 MEFYFSDANLRKDRFMNELVHRDEEGYVDLEVFLTFHKIRALTADVKDIAGAITTSNLLQ 60
Query: 59 VTEDGTKVK 67
+ E+ +V+
Sbjct: 61 MDEEHRRVR 69
>gi|321453772|gb|EFX64977.1| hypothetical protein DAPPUDRAFT_333645 [Daphnia pulex]
Length = 200
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 75/141 (53%), Positives = 98/141 (69%), Gaps = 2/141 (1%)
Query: 117 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEVT 176
MEFY SD+NL KDRF ++++ PEI + VF+ NKL LT D ++ KAL+ SK L+++
Sbjct: 1 MEFYFSDANLSKDRFMQNVIKDGPEIPLHVFMNFNKLRALTEDLKEIAKALKFSKTLKLS 60
Query: 177 EDGTKVRRTVVVQDKP--DVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKST 234
ED TKV R K +VD CT+YVE+LPP A ++I S+FS+YG V YVSLPKFK
Sbjct: 61 EDDTKVSRITPFHPKSQEEVDLCTVYVERLPPHASIEWITSIFSEYGVVAYVSLPKFKDV 120
Query: 235 GKLKGFAFVEFSTKEEAAKAL 255
++KGFAFVEF E AAKA+
Sbjct: 121 TRIKGFAFVEFCDPESAAKAV 141
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 47/66 (71%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEVT 60
MEFY SD+NL KDRF ++++ PEI + VF+ NKL LT D ++ KAL+ SK L+++
Sbjct: 1 MEFYFSDANLSKDRFMQNVIKDGPEIPLHVFMNFNKLRALTEDLKEIAKALKFSKTLKLS 60
Query: 61 EDGTKV 66
ED TKV
Sbjct: 61 EDDTKV 66
>gi|195393552|ref|XP_002055418.1| GJ19358 [Drosophila virilis]
gi|194149928|gb|EDW65619.1| GJ19358 [Drosophila virilis]
Length = 620
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 71/156 (45%), Positives = 99/156 (63%)
Query: 100 GGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHD 159
GGGR RK+ L+ I MEFY D+NL KDRF + +++ P + + +FL NK+ LT D
Sbjct: 50 GGGRKRKRHLFNAIRTQMEFYFGDANLSKDRFLRRYVEQDPYVPLDIFLTFNKIKTLTQD 109
Query: 160 PDDVVKALRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSK 219
+ +L S++LE+ E G KVRR + + DV++ T+YVE LP A HD+++ VFS+
Sbjct: 110 VQQISTSLSNSQMLELDETGLKVRRKTALPEHRDVNDKTLYVEALPSTATHDWLKEVFSR 169
Query: 220 YGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKAL 255
YG VTYVSLP + T K+K FAF+EF KAL
Sbjct: 170 YGPVTYVSLPHYPGTRKIKEFAFIEFEKSSSVEKAL 205
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 42/67 (62%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEVT 60
MEFY D+NL KDRF + +++ P + + +FL NK+ LT D + +L S++LE+
Sbjct: 67 MEFYFGDANLSKDRFLRRYVEQDPYVPLDIFLTFNKIKTLTQDVQQISTSLSNSQMLELD 126
Query: 61 EDGTKVK 67
E G KV+
Sbjct: 127 ETGLKVR 133
>gi|198468011|ref|XP_001354583.2| GA11366 [Drosophila pseudoobscura pseudoobscura]
gi|198146211|gb|EAL31637.2| GA11366 [Drosophila pseudoobscura pseudoobscura]
Length = 626
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 77/173 (44%), Positives = 107/173 (61%), Gaps = 5/173 (2%)
Query: 88 VDKDLSDLQRKDG--GGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVS 145
D + S+ ++D GGR RK+ LY I + MEFY D+NL KDRF + + + P + +
Sbjct: 36 TDAESSEPAKRDAAAGGRKRKRHLYNSIRSQMEFYFGDANLTKDRFLRRYVDQDPYVPLE 95
Query: 146 VFLKCNKLARLTHDPDDVVKALRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLP 205
+FL NK+ L D + KAL S+LLE+ E KVRR + D+ DV++ T+YVE LP
Sbjct: 96 IFLTFNKMKPLAEDVKQIAKALNNSQLLELDESALKVRRKTKLPDQRDVNDKTLYVEALP 155
Query: 206 PEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEF---STKEEAAKAL 255
A HD+++ VFS+YG V YVSLP + T K+K FAF+EF S E+A KA
Sbjct: 156 ANASHDWLKEVFSRYGPVAYVSLPHYPGTKKIKEFAFIEFERSSALEKAVKAF 208
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 40/67 (59%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEVT 60
MEFY D+NL KDRF + + + P + + +FL NK+ L D + KAL S+LLE+
Sbjct: 67 MEFYFGDANLTKDRFLRRYVDQDPYVPLEIFLTFNKMKPLAEDVKQIAKALNNSQLLELD 126
Query: 61 EDGTKVK 67
E KV+
Sbjct: 127 ESALKVR 133
>gi|157117115|ref|XP_001658707.1| lupus la protein (Sjogren syndrome type B antigen) (La/SS-B),
putative [Aedes aegypti]
gi|108876198|gb|EAT40423.1| AAEL007853-PA [Aedes aegypti]
Length = 537
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 69/139 (49%), Positives = 99/139 (71%)
Query: 100 GGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHD 159
G GRHRKKQ Y I + MEFY SD+NL KDR+ Q +++ P I + FLK N++ +L +
Sbjct: 27 GKGRHRKKQKYNAIRSQMEFYFSDANLTKDRYLGQRIKDDPFIPLEEFLKFNRIKQLADN 86
Query: 160 PDDVVKALRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSK 219
+D+ AL+ S LL +++D +KVRR ++ + ++CTIYVE LPP+A+HD++ +VFS
Sbjct: 87 VEDIATALKNSDLLLLSDDRSKVRRVTEPTERSNCEQCTIYVECLPPKADHDWVRNVFSA 146
Query: 220 YGKVTYVSLPKFKSTGKLK 238
YGKV YVSLPKFK + K+K
Sbjct: 147 YGKVAYVSLPKFKYSKKIK 165
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 46/67 (68%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEVT 60
MEFY SD+NL KDR+ Q +++ P I + FLK N++ +L + +D+ AL+ S LL ++
Sbjct: 44 MEFYFSDANLTKDRYLGQRIKDDPFIPLEEFLKFNRIKQLADNVEDIATALKNSDLLLLS 103
Query: 61 EDGTKVK 67
+D +KV+
Sbjct: 104 DDRSKVR 110
>gi|195135011|ref|XP_002011929.1| GI14301 [Drosophila mojavensis]
gi|193909183|gb|EDW08050.1| GI14301 [Drosophila mojavensis]
Length = 613
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 77/187 (41%), Positives = 108/187 (57%), Gaps = 3/187 (1%)
Query: 72 RHFLVPISMETEASDNVDKDLSDL---QRKDGGGRHRKKQLYQQIMNLMEFYLSDSNLRK 128
+ F P S TE V S + ++ DGGGR RK+ ++ I MEFY D+NL K
Sbjct: 14 QEFKKPNSTVTEGEAVVASTQSTVPTSEKTDGGGRKRKRHIFNAIRGQMEFYFGDANLSK 73
Query: 129 DRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEVTEDGTKVRRTVVV 188
DRF + +++ P + + +FL NK+ LT D + +L S LLE+ E G KVRR +
Sbjct: 74 DRFLRRYIEKDPYVPLEIFLTFNKIKTLTQDVQQISTSLSNSHLLELDESGLKVRRKTAL 133
Query: 189 QDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTK 248
+ DV+ T+YVE LP A HD+++ VF +YG V+YVSLP + T K+K FAF+EF
Sbjct: 134 PEHRDVNNKTLYVEALPATATHDWLKEVFGRYGTVSYVSLPHYPGTRKIKEFAFIEFEKS 193
Query: 249 EEAAKAL 255
KAL
Sbjct: 194 SSVEKAL 200
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 41/67 (61%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEVT 60
MEFY D+NL KDRF + +++ P + + +FL NK+ LT D + +L S LLE+
Sbjct: 62 MEFYFGDANLSKDRFLRRYIEKDPYVPLEIFLTFNKIKTLTQDVQQISTSLSNSHLLELD 121
Query: 61 EDGTKVK 67
E G KV+
Sbjct: 122 ESGLKVR 128
>gi|195447920|ref|XP_002071429.1| GK25140 [Drosophila willistoni]
gi|194167514|gb|EDW82415.1| GK25140 [Drosophila willistoni]
Length = 633
Score = 147 bits (371), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 76/185 (41%), Positives = 110/185 (59%), Gaps = 6/185 (3%)
Query: 77 PISMETEASDNVDKDLSDLQ------RKDGGGRHRKKQLYQQIMNLMEFYLSDSNLRKDR 130
P ++ T +KD S ++ +KD GGR RK+ LY I MEFY D+NL KDR
Sbjct: 31 PSAVSTPTGPTEEKDESAIKTETTKAKKDDGGRKRKRHLYNAIRGQMEFYFGDANLSKDR 90
Query: 131 FFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEVTEDGTKVRRTVVVQD 190
F + +++ P + + +FL NK+ LT D + +L S+LLE+ + G KVRR +
Sbjct: 91 FLRRHVEQDPFVPLEIFLTFNKIKLLTQDIQQIATSLSNSQLLELDKSGLKVRRKTALPK 150
Query: 191 KPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEE 250
+ DV++ T+YVE LP A HD+++ VFS+YG V YVSLP + T K+K FAF+EF
Sbjct: 151 QRDVNDRTLYVEALPANASHDWLKEVFSRYGPVAYVSLPHYPGTKKIKEFAFIEFERTAS 210
Query: 251 AAKAL 255
KA+
Sbjct: 211 LEKAI 215
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 42/67 (62%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEVT 60
MEFY D+NL KDRF + +++ P + + +FL NK+ LT D + +L S+LLE+
Sbjct: 77 MEFYFGDANLSKDRFLRRHVEQDPFVPLEIFLTFNKIKLLTQDIQQIATSLSNSQLLELD 136
Query: 61 EDGTKVK 67
+ G KV+
Sbjct: 137 KSGLKVR 143
>gi|195481641|ref|XP_002101720.1| mxc [Drosophila yakuba]
gi|194189244|gb|EDX02828.1| mxc [Drosophila yakuba]
Length = 595
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 72/158 (45%), Positives = 99/158 (62%)
Query: 98 KDGGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLT 157
K GGR RK+ L+ I MEFY D+NL KDRF + +++ P + + +FL NK+ LT
Sbjct: 48 KKDGGRKRKRHLFNSIRGQMEFYFGDANLSKDRFLRRYVEQDPYVPLEIFLTFNKIKTLT 107
Query: 158 HDPDDVVKALRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVF 217
D + KAL S+LLE+ E KV+R + D+ DV++ T+YVE LP A HD+++ VF
Sbjct: 108 QDVQQIAKALSNSQLLELDETKLKVKRRTKLPDQRDVNDKTLYVEALPANATHDWLKEVF 167
Query: 218 SKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKAL 255
S+YG V YVSLP + T K+K FAF+EF KAL
Sbjct: 168 SRYGPVAYVSLPHYPGTKKIKEFAFIEFEKSGSVEKAL 205
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 42/67 (62%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEVT 60
MEFY D+NL KDRF + +++ P + + +FL NK+ LT D + KAL S+LLE+
Sbjct: 67 MEFYFGDANLSKDRFLRRYVEQDPYVPLEIFLTFNKIKTLTQDVQQIAKALSNSQLLELD 126
Query: 61 EDGTKVK 67
E KVK
Sbjct: 127 ETKLKVK 133
>gi|225708530|gb|ACO10111.1| La protein homolog [Osmerus mordax]
Length = 220
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 77/162 (47%), Positives = 110/162 (67%), Gaps = 3/162 (1%)
Query: 103 RHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDP 160
R R KQL I +EF+ D NL KDRF QL+++S + +++SV N++ +++ D
Sbjct: 25 RSRVKQLLSDIKKQVEFWFGDVNLHKDRFLKQLIEDSRDGYVDLSVLTTFNRMKKMSTDC 84
Query: 161 DDVVKALRKSKLLEVTEDGTKVRRTVVVQDKP-DVDECTIYVEKLPPEAEHDYIESVFSK 219
+ +AL+ S L+EV +GTKVRR + D P DVD T+YVE LP + +H +IE VFSK
Sbjct: 85 KLIARALKNSSLVEVNLEGTKVRRQDPLGDDPKDVDTRTVYVELLPKDVKHGWIERVFSK 144
Query: 220 YGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNP 261
G V YVS+PK+K++G+ KGFAFVEF T+E+A KA+E+ NP
Sbjct: 145 CGNVVYVSIPKYKTSGQSKGFAFVEFETEEQAQKAIEMLNNP 186
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 46/69 (66%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
+EF+ D NL KDRF QL+++S + +++SV N++ +++ D + +AL+ S L+E
Sbjct: 39 VEFWFGDVNLHKDRFLKQLIEDSRDGYVDLSVLTTFNRMKKMSTDCKLIARALKNSSLVE 98
Query: 59 VTEDGTKVK 67
V +GTKV+
Sbjct: 99 VNLEGTKVR 107
>gi|163916279|gb|AAI57142.1| Unknown (protein for IMAGE:7537566) [Xenopus (Silurana) tropicalis]
Length = 233
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 81/189 (42%), Positives = 121/189 (64%), Gaps = 6/189 (3%)
Query: 79 SMETEA-SDNVDKDLSDLQRKD--GGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQL 135
++ET+ S+ V +D S RKD R R KQL I ++F+ D NL KDRF +
Sbjct: 3 AIETDTPSNKVKEDESTDLRKDREKKKRSRVKQLLADIAKQVDFWFGDVNLHKDRFLREQ 62
Query: 136 LQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEVTEDGTKVRRTVVVQDKP- 192
++++ + I++S+ NK+ ++T D + +A++ S ++E+ GTK+RR + +KP
Sbjct: 63 IEKTRDGYIDISLLASFNKMKKITTDSKLIARAVKNSSVVEINLSGTKIRRRFPLGEKPQ 122
Query: 193 DVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAA 252
DVD T+YVE LP H +IE VF KYG V YVS+P++KSTG KGFAF+EF T+E+AA
Sbjct: 123 DVDSRTVYVELLPKNVTHSWIERVFGKYGMVVYVSIPRYKSTGDPKGFAFIEFETQEQAA 182
Query: 253 KALELGLNP 261
KA+E+ NP
Sbjct: 183 KAIEVLNNP 191
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 44/69 (63%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
++F+ D NL KDRF + ++++ + I++S+ NK+ ++T D + +A++ S ++E
Sbjct: 44 VDFWFGDVNLHKDRFLREQIEKTRDGYIDISLLASFNKMKKITTDSKLIARAVKNSSVVE 103
Query: 59 VTEDGTKVK 67
+ GTK++
Sbjct: 104 INLSGTKIR 112
>gi|321468019|gb|EFX79006.1| hypothetical protein DAPPUDRAFT_319946 [Daphnia pulex]
Length = 533
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 74/143 (51%), Positives = 98/143 (68%), Gaps = 2/143 (1%)
Query: 109 LYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALR 168
L+ I N MEFY SD+NL KDRF ++++ PEI + VF+ NKL LT D ++ KAL+
Sbjct: 65 LHTAIRNQMEFYFSDANLSKDRFMQNVIKDGPEIPLHVFMNFNKLRALTEDLKEIAKALK 124
Query: 169 KSKLLEVTEDGTKVRRTVVVQDKP--DVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYV 226
SK L+++ED TKV R + K +VD CT+YVE+LPP A ++I S+FS+YG V YV
Sbjct: 125 FSKTLKLSEDETKVSRITPFRPKSQEEVDLCTVYVERLPPHASIEWITSIFSEYGVVAYV 184
Query: 227 SLPKFKSTGKLKGFAFVEFSTKE 249
SLPKFK ++KGFAFVEF E
Sbjct: 185 SLPKFKDATRIKGFAFVEFCDPE 207
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 47/66 (71%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEVT 60
MEFY SD+NL KDRF ++++ PEI + VF+ NKL LT D ++ KAL+ SK L+++
Sbjct: 73 MEFYFSDANLSKDRFMQNVIKDGPEIPLHVFMNFNKLRALTEDLKEIAKALKFSKTLKLS 132
Query: 61 EDGTKV 66
ED TKV
Sbjct: 133 EDETKV 138
>gi|241997842|ref|XP_002433564.1| lupus La ribonucleoprotein, putative [Ixodes scapularis]
gi|215495323|gb|EEC04964.1| lupus La ribonucleoprotein, putative [Ixodes scapularis]
Length = 531
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/149 (45%), Positives = 107/149 (71%), Gaps = 2/149 (1%)
Query: 110 YQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKAL 167
+ I MEFY SD+NLRKDRF +L+QE+ E +++ VFL +K+ T+D + AL
Sbjct: 14 FNGIREQMEFYFSDANLRKDRFMGELVQENEEGYVDLEVFLTFHKIQGFTNDAKVIATAL 73
Query: 168 RKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVS 227
S++L++ E+ T+V+R ++ K DVD+CT+YVE++P A+H+++++ FSK+G+V YVS
Sbjct: 74 ESSEILKLNEEKTRVKRVTKLEYKHDVDDCTLYVERIPLNADHNWLKTAFSKHGQVLYVS 133
Query: 228 LPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
LP+++ GK+KGFAFVEFS+ EE K +
Sbjct: 134 LPRYRHNGKIKGFAFVEFSSPEEVDKVCQ 162
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 48/69 (69%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
MEFY SD+NLRKDRF +L+QE+ E +++ VFL +K+ T+D + AL S++L+
Sbjct: 21 MEFYFSDANLRKDRFMGELVQENEEGYVDLEVFLTFHKIQGFTNDAKVIATALESSEILK 80
Query: 59 VTEDGTKVK 67
+ E+ T+VK
Sbjct: 81 LNEEKTRVK 89
>gi|113931440|ref|NP_001039168.1| la-related protein 7 [Xenopus (Silurana) tropicalis]
gi|123910245|sp|Q28G87.1|LARP7_XENTR RecName: Full=La-related protein 7; AltName: Full=La
ribonucleoprotein domain family member 7
gi|89266879|emb|CAJ83882.1| novel La domain and RNA recognition motif. (a.k.a. RRM, RBD, or RNP
domain) containing protein [Xenopus (Silurana)
tropicalis]
Length = 593
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 81/189 (42%), Positives = 121/189 (64%), Gaps = 6/189 (3%)
Query: 79 SMETEA-SDNVDKDLSDLQRKD--GGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQL 135
++ET+ S+ V +D S RKD R R KQL I ++F+ D NL KDRF +
Sbjct: 3 AIETDTPSNKVKEDESTDLRKDREKKKRSRVKQLLADIAKQVDFWFGDVNLHKDRFLREQ 62
Query: 136 LQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEVTEDGTKVRRTVVVQDKP- 192
++++ + I++S+ NK+ ++T D + +A++ S ++E+ GTK+RR + +KP
Sbjct: 63 IEKTRDGYIDISLLASFNKMKKITTDSKLIARAVKNSSVVEINLSGTKIRRRFPLGEKPQ 122
Query: 193 DVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAA 252
DVD T+YVE LP H +IE VF KYG V YVS+P++KSTG KGFAF+EF T+E+AA
Sbjct: 123 DVDSRTVYVELLPKNVTHSWIERVFGKYGMVVYVSIPRYKSTGDPKGFAFIEFETQEQAA 182
Query: 253 KALELGLNP 261
KA+E+ NP
Sbjct: 183 KAIEVLNNP 191
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 44/69 (63%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
++F+ D NL KDRF + ++++ + I++S+ NK+ ++T D + +A++ S ++E
Sbjct: 44 VDFWFGDVNLHKDRFLREQIEKTRDGYIDISLLASFNKMKKITTDSKLIARAVKNSSVVE 103
Query: 59 VTEDGTKVK 67
+ GTK++
Sbjct: 104 INLSGTKIR 112
>gi|24640787|ref|NP_524795.2| La related protein 7 [Drosophila melanogaster]
gi|7291035|gb|AAF46473.1| La related protein 7 [Drosophila melanogaster]
gi|16768872|gb|AAL28655.1| LD09531p [Drosophila melanogaster]
gi|220953504|gb|ACL89295.1| mxc-PA [synthetic construct]
Length = 595
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 73/161 (45%), Positives = 102/161 (63%), Gaps = 3/161 (1%)
Query: 98 KDGGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLT 157
K GGR RK+ L+ I MEFY D+NL KDRF + +++ P + + +FL NK+ LT
Sbjct: 48 KKDGGRKRKRHLFNSIRGQMEFYFGDANLSKDRFLRRYVEQDPYVPLEIFLTFNKIKTLT 107
Query: 158 HDPDDVVKALRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVF 217
D + KAL S+LLE+ E KV+R + D+ DV++ T+YVE LP A HD+++ VF
Sbjct: 108 QDVQQIAKALSNSQLLELDETELKVKRRTKLPDQRDVNDKTLYVEALPANATHDWLKEVF 167
Query: 218 SKYGKVTYVSLPKFKSTGKLKGFAFVEF---STKEEAAKAL 255
S+YG V YVSLP + T K+K FAF+EF + E+A KA
Sbjct: 168 SRYGPVAYVSLPHYPGTKKIKEFAFIEFEKSGSLEKAVKAF 208
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 42/67 (62%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEVT 60
MEFY D+NL KDRF + +++ P + + +FL NK+ LT D + KAL S+LLE+
Sbjct: 67 MEFYFGDANLSKDRFLRRYVEQDPYVPLEIFLTFNKIKTLTQDVQQIAKALSNSQLLELD 126
Query: 61 EDGTKVK 67
E KVK
Sbjct: 127 ETELKVK 133
>gi|194890572|ref|XP_001977343.1| GG18304 [Drosophila erecta]
gi|190648992|gb|EDV46270.1| GG18304 [Drosophila erecta]
Length = 595
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 71/158 (44%), Positives = 98/158 (62%)
Query: 98 KDGGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLT 157
K GGR RK+ L+ I MEFY D+NL KDRF + +++ P + + +FL NK+ LT
Sbjct: 48 KKDGGRKRKRHLFNSIRTQMEFYFGDANLSKDRFLRRYVEQDPYVPLEIFLSFNKIKTLT 107
Query: 158 HDPDDVVKALRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVF 217
D + KAL S LL++ E KV+R + D+ DV++ T+YVE LP A HD+++ VF
Sbjct: 108 QDVQQIAKALSNSHLLKLDETKVKVKRRTKLPDQRDVNDQTLYVEALPANATHDWLKEVF 167
Query: 218 SKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKAL 255
S+YG V YVSLP + T K+K FAF+EF KAL
Sbjct: 168 SRYGPVAYVSLPHYPGTKKIKEFAFIEFEKSGSVEKAL 205
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 41/67 (61%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEVT 60
MEFY D+NL KDRF + +++ P + + +FL NK+ LT D + KAL S LL++
Sbjct: 67 MEFYFGDANLSKDRFLRRYVEQDPYVPLEIFLSFNKIKTLTQDVQQIAKALSNSHLLKLD 126
Query: 61 EDGTKVK 67
E KVK
Sbjct: 127 ETKVKVK 133
>gi|6746602|gb|AAF27644.1| La autoantigen-like 2 [Drosophila melanogaster]
Length = 595
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 73/161 (45%), Positives = 102/161 (63%), Gaps = 3/161 (1%)
Query: 98 KDGGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLT 157
K GGR RK+ L+ I MEFY D+NL KDRF + +++ P + + +FL NK+ LT
Sbjct: 48 KKDGGRKRKRHLFNSIRGQMEFYFGDANLSKDRFLRRYVEQDPYVPLEIFLTFNKIKTLT 107
Query: 158 HDPDDVVKALRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVF 217
D + KAL S+LLE+ E KV+R + D+ DV++ T+YVE LP A HD+++ VF
Sbjct: 108 QDVQQIAKALSNSQLLELDETELKVKRRTKLPDQRDVNDKTLYVEALPANATHDWLKEVF 167
Query: 218 SKYGKVTYVSLPKFKSTGKLKGFAFVEF---STKEEAAKAL 255
S+YG V YVSLP + T K+K FAF+EF + E+A KA
Sbjct: 168 SRYGPVAYVSLPHYPGTKKIKEFAFIEFEKSGSLEKAVKAF 208
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 42/67 (62%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEVT 60
MEFY D+NL KDRF + +++ P + + +FL NK+ LT D + KAL S+LLE+
Sbjct: 67 MEFYFGDANLSKDRFLRRYVEQDPYVPLEIFLTFNKIKTLTQDVQQIAKALSNSQLLELD 126
Query: 61 EDGTKVK 67
E KVK
Sbjct: 127 ETELKVK 133
>gi|348543283|ref|XP_003459113.1| PREDICTED: la-related protein 7-like [Oreochromis niloticus]
Length = 537
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 73/162 (45%), Positives = 108/162 (66%), Gaps = 3/162 (1%)
Query: 103 RHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDP 160
R R KQL ++ +EF+ D NL KDRF +L++ES +++SV N++ +LT D
Sbjct: 27 RSRVKQLLSEVKKQVEFWFGDVNLSKDRFLKKLMEESDSGYVDISVLASFNRMKQLTTDT 86
Query: 161 DDVVKALRKSKLLEVTEDGTKVRRTVVVQDKP-DVDECTIYVEKLPPEAEHDYIESVFSK 219
+ +AL+ S ++E+ +GTKVRR + + + P DVD T+YVE LP + H +IE VF+K
Sbjct: 87 KLIARALKNSSVVELNLEGTKVRRQLPIGELPNDVDSRTVYVELLPKDVTHSWIERVFTK 146
Query: 220 YGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNP 261
G V YVS+P++KS+G KGFAFVEF +E+A KA+E+ NP
Sbjct: 147 CGNVVYVSIPRYKSSGDSKGFAFVEFEKEEQAQKAIEMLNNP 188
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 45/69 (65%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
+EF+ D NL KDRF +L++ES +++SV N++ +LT D + +AL+ S ++E
Sbjct: 41 VEFWFGDVNLSKDRFLKKLMEESDSGYVDISVLASFNRMKQLTTDTKLIARALKNSSVVE 100
Query: 59 VTEDGTKVK 67
+ +GTKV+
Sbjct: 101 LNLEGTKVR 109
>gi|194769392|ref|XP_001966788.1| GF19208 [Drosophila ananassae]
gi|190618309|gb|EDV33833.1| GF19208 [Drosophila ananassae]
Length = 607
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 73/161 (45%), Positives = 102/161 (63%), Gaps = 3/161 (1%)
Query: 98 KDGGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLT 157
K GGR RK+ LY I MEFY D+NL KDRF + + + P + + +FL NK+ LT
Sbjct: 55 KPNGGRKRKRYLYNAIRGQMEFYFGDANLSKDRFLRRYVDQDPYVPLEIFLSFNKIKTLT 114
Query: 158 HDPDDVVKALRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVF 217
D + K+L S+LLE+ E G KV+R + + +V++ T+YVE LP A HD+++ VF
Sbjct: 115 LDVGQIAKSLGNSQLLELDESGLKVKRKTKLPVQREVNDKTLYVEALPANANHDWLKEVF 174
Query: 218 SKYGKVTYVSLPKFKSTGKLKGFAFVEF---STKEEAAKAL 255
S+YG V YVSLP + T K+K FAF+EF S+ E+A KA
Sbjct: 175 SRYGPVAYVSLPHYPGTKKIKEFAFIEFEKSSSVEKAVKAF 215
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEVT 60
MEFY D+NL KDRF + + + P + + +FL NK+ LT D + K+L S+LLE+
Sbjct: 74 MEFYFGDANLSKDRFLRRYVDQDPYVPLEIFLSFNKIKTLTLDVGQIAKSLGNSQLLELD 133
Query: 61 EDGTKVKGNIIRHFLVPISME 81
E G KVK R +P+ E
Sbjct: 134 ESGLKVK----RKTKLPVQRE 150
>gi|291401253|ref|XP_002717038.1| PREDICTED: La ribonucleoprotein domain family, member 7 isoform 1
[Oryctolagus cuniculus]
Length = 579
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 73/162 (45%), Positives = 107/162 (66%), Gaps = 3/162 (1%)
Query: 103 RHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDP 160
R R KQ+ I ++F+ D+NL KDRF + +++S + +++S+ L NK+ +LT D
Sbjct: 27 RSRVKQVLADIAKQVDFWFGDANLHKDRFLREQIEKSRDGYVDISLLLSFNKMKKLTTDG 86
Query: 161 DDVVKALRKSKLLEVTEDGTKVRRTVVVQDKP-DVDECTIYVEKLPPEAEHDYIESVFSK 219
+ +AL+ S ++E+ +GT++RR + ++P D DE T+YVE LP H +IE VF K
Sbjct: 87 KLIARALKSSAIVELDLEGTRIRRKKPLGERPKDEDERTVYVELLPKNVNHSWIERVFGK 146
Query: 220 YGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNP 261
G V YVS+P +KSTG KGFAFVEF TKE+AAKA+E NP
Sbjct: 147 CGNVVYVSIPHYKSTGDPKGFAFVEFETKEQAAKAIEFLNNP 188
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 47/69 (68%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
++F+ D+NL KDRF + +++S + +++S+ L NK+ +LT D + +AL+ S ++E
Sbjct: 41 VDFWFGDANLHKDRFLREQIEKSRDGYVDISLLLSFNKMKKLTTDGKLIARALKSSAIVE 100
Query: 59 VTEDGTKVK 67
+ +GT+++
Sbjct: 101 LDLEGTRIR 109
>gi|195042868|ref|XP_001991510.1| GH12028 [Drosophila grimshawi]
gi|193901268|gb|EDW00135.1| GH12028 [Drosophila grimshawi]
Length = 620
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 69/160 (43%), Positives = 99/160 (61%)
Query: 97 RKDGGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARL 156
+ D GR RK+ L I MEFY D+NL KDRF + +++ P + + +FL NK+ L
Sbjct: 41 KNDTAGRKRKRHLLNSIRAQMEFYFGDANLSKDRFLRRYVEQDPYVPLDIFLTFNKIKTL 100
Query: 157 THDPDDVVKALRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESV 216
T D + +L S+LLE+ E G KVRR + + DV++ T+YVE LP A HD+++ V
Sbjct: 101 TQDVQQISTSLSNSQLLELDESGLKVRRKTELPKQRDVNDKTLYVEALPATATHDWLKEV 160
Query: 217 FSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
FS+YG V+YVSLP + T K+K FAF+EF KA++
Sbjct: 161 FSRYGPVSYVSLPHYPGTRKIKEFAFIEFEKSGSVEKAIK 200
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 42/67 (62%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEVT 60
MEFY D+NL KDRF + +++ P + + +FL NK+ LT D + +L S+LLE+
Sbjct: 61 MEFYFGDANLSKDRFLRRYVEQDPYVPLDIFLTFNKIKTLTQDVQQISTSLSNSQLLELD 120
Query: 61 EDGTKVK 67
E G KV+
Sbjct: 121 ESGLKVR 127
>gi|291401255|ref|XP_002717039.1| PREDICTED: La ribonucleoprotein domain family, member 7 isoform 2
[Oryctolagus cuniculus]
Length = 571
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 73/162 (45%), Positives = 107/162 (66%), Gaps = 3/162 (1%)
Query: 103 RHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDP 160
R R KQ+ I ++F+ D+NL KDRF + +++S + +++S+ L NK+ +LT D
Sbjct: 27 RSRVKQVLADIAKQVDFWFGDANLHKDRFLREQIEKSRDGYVDISLLLSFNKMKKLTTDG 86
Query: 161 DDVVKALRKSKLLEVTEDGTKVRRTVVVQDKP-DVDECTIYVEKLPPEAEHDYIESVFSK 219
+ +AL+ S ++E+ +GT++RR + ++P D DE T+YVE LP H +IE VF K
Sbjct: 87 KLIARALKSSAIVELDLEGTRIRRKKPLGERPKDEDERTVYVELLPKNVNHSWIERVFGK 146
Query: 220 YGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNP 261
G V YVS+P +KSTG KGFAFVEF TKE+AAKA+E NP
Sbjct: 147 CGNVVYVSIPHYKSTGDPKGFAFVEFETKEQAAKAIEFLNNP 188
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 47/69 (68%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
++F+ D+NL KDRF + +++S + +++S+ L NK+ +LT D + +AL+ S ++E
Sbjct: 41 VDFWFGDANLHKDRFLREQIEKSRDGYVDISLLLSFNKMKKLTTDGKLIARALKSSAIVE 100
Query: 59 VTEDGTKVK 67
+ +GT+++
Sbjct: 101 LDLEGTRIR 109
>gi|281344045|gb|EFB19629.1| hypothetical protein PANDA_015632 [Ailuropoda melanoleuca]
Length = 556
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 107/162 (66%), Gaps = 3/162 (1%)
Query: 103 RHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDP 160
R R KQ+ I ++F+ D+NL KDRF + +++S + +++S+ + NK+ +LT D
Sbjct: 28 RSRVKQVLADIAKQVDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDG 87
Query: 161 DDVVKALRKSKLLEVTEDGTKVRRTVVVQDKP-DVDECTIYVEKLPPEAEHDYIESVFSK 219
+ +ALR S ++E+ +GT++RR + ++P D DE T+YVE LP H +IE VF K
Sbjct: 88 KLIARALRSSSVVELDLEGTRIRRKKPLGERPKDEDERTVYVELLPKNVNHSWIERVFGK 147
Query: 220 YGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNP 261
G V Y+S+P +KSTG KGFAFVEF TKE+AAKA+E NP
Sbjct: 148 CGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIEFLNNP 189
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 47/69 (68%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
++F+ D+NL KDRF + +++S + +++S+ + NK+ +LT D + +ALR S ++E
Sbjct: 42 VDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALRSSSVVE 101
Query: 59 VTEDGTKVK 67
+ +GT+++
Sbjct: 102 LDLEGTRIR 110
>gi|297674196|ref|XP_002815120.1| PREDICTED: la-related protein 7 isoform 1 [Pongo abelii]
Length = 589
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 107/162 (66%), Gaps = 3/162 (1%)
Query: 103 RHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDP 160
R R KQ+ I ++F+ D+NL KDRF + +++S + +++S+ + NK+ +LT D
Sbjct: 35 RSRVKQVLADIAKQVDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDG 94
Query: 161 DDVVKALRKSKLLEVTEDGTKVRRTVVVQDKP-DVDECTIYVEKLPPEAEHDYIESVFSK 219
+ +ALR S ++E+ +GT++RR + ++P D DE T+YVE LP H +IE VF K
Sbjct: 95 KLIARALRSSAVVELDLEGTRIRRKKPLGERPKDEDERTVYVELLPKNVNHSWIERVFGK 154
Query: 220 YGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNP 261
G V Y+S+P +KSTG KGFAFVEF TKE+AAKA+E NP
Sbjct: 155 CGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIEFLNNP 196
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 47/69 (68%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
++F+ D+NL KDRF + +++S + +++S+ + NK+ +LT D + +ALR S ++E
Sbjct: 49 VDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALRSSAVVE 108
Query: 59 VTEDGTKVK 67
+ +GT+++
Sbjct: 109 LDLEGTRIR 117
>gi|114595713|ref|XP_001144338.1| PREDICTED: la-related protein 7 isoform 9 [Pan troglodytes]
Length = 616
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 107/162 (66%), Gaps = 3/162 (1%)
Query: 103 RHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDP 160
R R KQ+ I ++F+ D+NL KDRF + +++S + +++S+ + NK+ +LT D
Sbjct: 62 RSRVKQVLADIAKQVDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDG 121
Query: 161 DDVVKALRKSKLLEVTEDGTKVRRTVVVQDKP-DVDECTIYVEKLPPEAEHDYIESVFSK 219
+ +ALR S ++E+ +GT++RR + ++P D DE T+YVE LP H +IE VF K
Sbjct: 122 KLIARALRSSAVVELDLEGTRIRRKKPLGERPKDEDERTVYVELLPKNVNHSWIERVFGK 181
Query: 220 YGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNP 261
G V Y+S+P +KSTG KGFAFVEF TKE+AAKA+E NP
Sbjct: 182 CGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIEFLNNP 223
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 47/69 (68%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
++F+ D+NL KDRF + +++S + +++S+ + NK+ +LT D + +ALR S ++E
Sbjct: 76 VDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALRSSAVVE 135
Query: 59 VTEDGTKVK 67
+ +GT+++
Sbjct: 136 LDLEGTRIR 144
>gi|426345267|ref|XP_004040342.1| PREDICTED: la-related protein 7 isoform 1 [Gorilla gorilla gorilla]
gi|426345269|ref|XP_004040343.1| PREDICTED: la-related protein 7 isoform 2 [Gorilla gorilla gorilla]
Length = 582
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 107/162 (66%), Gaps = 3/162 (1%)
Query: 103 RHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDP 160
R R KQ+ I ++F+ D+NL KDRF + +++S + +++S+ + NK+ +LT D
Sbjct: 28 RSRVKQVLADIAKQVDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDG 87
Query: 161 DDVVKALRKSKLLEVTEDGTKVRRTVVVQDKP-DVDECTIYVEKLPPEAEHDYIESVFSK 219
+ +ALR S ++E+ +GT++RR + ++P D DE T+YVE LP H +IE VF K
Sbjct: 88 KLIARALRSSAVVELDLEGTRIRRKKPLGERPKDEDERTVYVELLPKNVNHSWIERVFGK 147
Query: 220 YGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNP 261
G V Y+S+P +KSTG KGFAFVEF TKE+AAKA+E NP
Sbjct: 148 CGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIEFLNNP 189
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 47/69 (68%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
++F+ D+NL KDRF + +++S + +++S+ + NK+ +LT D + +ALR S ++E
Sbjct: 42 VDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALRSSAVVE 101
Query: 59 VTEDGTKVK 67
+ +GT+++
Sbjct: 102 LDLEGTRIR 110
>gi|426345271|ref|XP_004040344.1| PREDICTED: la-related protein 7 isoform 3 [Gorilla gorilla gorilla]
Length = 589
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 107/162 (66%), Gaps = 3/162 (1%)
Query: 103 RHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDP 160
R R KQ+ I ++F+ D+NL KDRF + +++S + +++S+ + NK+ +LT D
Sbjct: 35 RSRVKQVLADIAKQVDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDG 94
Query: 161 DDVVKALRKSKLLEVTEDGTKVRRTVVVQDKP-DVDECTIYVEKLPPEAEHDYIESVFSK 219
+ +ALR S ++E+ +GT++RR + ++P D DE T+YVE LP H +IE VF K
Sbjct: 95 KLIARALRSSAVVELDLEGTRIRRKKPLGERPKDEDERTVYVELLPKNVNHSWIERVFGK 154
Query: 220 YGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNP 261
G V Y+S+P +KSTG KGFAFVEF TKE+AAKA+E NP
Sbjct: 155 CGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIEFLNNP 196
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 47/69 (68%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
++F+ D+NL KDRF + +++S + +++S+ + NK+ +LT D + +ALR S ++E
Sbjct: 49 VDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALRSSAVVE 108
Query: 59 VTEDGTKVK 67
+ +GT+++
Sbjct: 109 LDLEGTRIR 117
>gi|441658345|ref|XP_003269385.2| PREDICTED: la-related protein 7 isoform 1 [Nomascus leucogenys]
Length = 588
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 107/162 (66%), Gaps = 3/162 (1%)
Query: 103 RHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDP 160
R R KQ+ I ++F+ D+NL KDRF + +++S + +++S+ + NK+ +LT D
Sbjct: 35 RSRVKQVLADIAKQVDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDG 94
Query: 161 DDVVKALRKSKLLEVTEDGTKVRRTVVVQDKP-DVDECTIYVEKLPPEAEHDYIESVFSK 219
+ +ALR S ++E+ +GT++RR + ++P D DE T+YVE LP H +IE VF K
Sbjct: 95 KLIARALRSSAVVELDLEGTRIRRKKPLGERPKDEDERTVYVELLPKNVNHSWIERVFGK 154
Query: 220 YGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNP 261
G V Y+S+P +KSTG KGFAFVEF TKE+AAKA+E NP
Sbjct: 155 CGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIEFLNNP 196
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 47/69 (68%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
++F+ D+NL KDRF + +++S + +++S+ + NK+ +LT D + +ALR S ++E
Sbjct: 49 VDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALRSSAVVE 108
Query: 59 VTEDGTKVK 67
+ +GT+++
Sbjct: 109 LDLEGTRIR 117
>gi|402870266|ref|XP_003899154.1| PREDICTED: la-related protein 7 [Papio anubis]
Length = 581
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 107/162 (66%), Gaps = 3/162 (1%)
Query: 103 RHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDP 160
R R KQ+ I ++F+ D+NL KDRF + +++S + +++S+ + NK+ +LT D
Sbjct: 28 RSRVKQVLADIAKQVDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDG 87
Query: 161 DDVVKALRKSKLLEVTEDGTKVRRTVVVQDKP-DVDECTIYVEKLPPEAEHDYIESVFSK 219
+ +ALR S ++E+ +GT++RR + ++P D DE T+YVE LP H +IE VF K
Sbjct: 88 KLIARALRSSAVVELDLEGTRIRRKKPLGERPKDEDERTVYVELLPKNVNHSWIERVFGK 147
Query: 220 YGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNP 261
G V Y+S+P +KSTG KGFAFVEF TKE+AAKA+E NP
Sbjct: 148 CGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIEFLNNP 189
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 47/69 (68%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
++F+ D+NL KDRF + +++S + +++S+ + NK+ +LT D + +ALR S ++E
Sbjct: 42 VDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALRSSAVVE 101
Query: 59 VTEDGTKVK 67
+ +GT+++
Sbjct: 102 LDLEGTRIR 110
>gi|114595715|ref|XP_001144568.1| PREDICTED: la-related protein 7 isoform 12 [Pan troglodytes]
gi|114595719|ref|XP_001144640.1| PREDICTED: la-related protein 7 isoform 13 [Pan troglodytes]
gi|410218494|gb|JAA06466.1| La ribonucleoprotein domain family, member 7 [Pan troglodytes]
gi|410264394|gb|JAA20163.1| La ribonucleoprotein domain family, member 7 [Pan troglodytes]
gi|410295050|gb|JAA26125.1| La ribonucleoprotein domain family, member 7 [Pan troglodytes]
Length = 582
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 107/162 (66%), Gaps = 3/162 (1%)
Query: 103 RHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDP 160
R R KQ+ I ++F+ D+NL KDRF + +++S + +++S+ + NK+ +LT D
Sbjct: 28 RSRVKQVLADIAKQVDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDG 87
Query: 161 DDVVKALRKSKLLEVTEDGTKVRRTVVVQDKP-DVDECTIYVEKLPPEAEHDYIESVFSK 219
+ +ALR S ++E+ +GT++RR + ++P D DE T+YVE LP H +IE VF K
Sbjct: 88 KLIARALRSSAVVELDLEGTRIRRKKPLGERPKDEDERTVYVELLPKNVNHSWIERVFGK 147
Query: 220 YGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNP 261
G V Y+S+P +KSTG KGFAFVEF TKE+AAKA+E NP
Sbjct: 148 CGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIEFLNNP 189
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 47/69 (68%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
++F+ D+NL KDRF + +++S + +++S+ + NK+ +LT D + +ALR S ++E
Sbjct: 42 VDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALRSSAVVE 101
Query: 59 VTEDGTKVK 67
+ +GT+++
Sbjct: 102 LDLEGTRIR 110
>gi|397519888|ref|XP_003830084.1| PREDICTED: LOW QUALITY PROTEIN: la-related protein 7 [Pan paniscus]
Length = 589
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 107/162 (66%), Gaps = 3/162 (1%)
Query: 103 RHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDP 160
R R KQ+ I ++F+ D+NL KDRF + +++S + +++S+ + NK+ +LT D
Sbjct: 35 RSRVKQVLADIAKQVDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDG 94
Query: 161 DDVVKALRKSKLLEVTEDGTKVRRTVVVQDKP-DVDECTIYVEKLPPEAEHDYIESVFSK 219
+ +ALR S ++E+ +GT++RR + ++P D DE T+YVE LP H +IE VF K
Sbjct: 95 KLIARALRSSAVVELDLEGTRIRRKKPLGERPKDEDERTVYVELLPKNVNHSWIERVFGK 154
Query: 220 YGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNP 261
G V Y+S+P +KSTG KGFAFVEF TKE+AAKA+E NP
Sbjct: 155 CGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIEFLNNP 196
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 47/69 (68%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
++F+ D+NL KDRF + +++S + +++S+ + NK+ +LT D + +ALR S ++E
Sbjct: 49 VDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALRSSAVVE 108
Query: 59 VTEDGTKVK 67
+ +GT+++
Sbjct: 109 LDLEGTRIR 117
>gi|75076233|sp|Q4R627.1|LARP7_MACFA RecName: Full=La-related protein 7; AltName: Full=La
ribonucleoprotein domain family member 7
gi|67970208|dbj|BAE01448.1| unnamed protein product [Macaca fascicularis]
gi|380813622|gb|AFE78685.1| la-related protein 7 [Macaca mulatta]
gi|383419049|gb|AFH32738.1| la-related protein 7 [Macaca mulatta]
gi|384947590|gb|AFI37400.1| la-related protein 7 [Macaca mulatta]
Length = 581
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 107/162 (66%), Gaps = 3/162 (1%)
Query: 103 RHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDP 160
R R KQ+ I ++F+ D+NL KDRF + +++S + +++S+ + NK+ +LT D
Sbjct: 28 RSRVKQVLADIAKQVDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDG 87
Query: 161 DDVVKALRKSKLLEVTEDGTKVRRTVVVQDKP-DVDECTIYVEKLPPEAEHDYIESVFSK 219
+ +ALR S ++E+ +GT++RR + ++P D DE T+YVE LP H +IE VF K
Sbjct: 88 KLIARALRSSAVVELDLEGTRIRRKKPLGERPKDEDERTVYVELLPKNVNHSWIERVFGK 147
Query: 220 YGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNP 261
G V Y+S+P +KSTG KGFAFVEF TKE+AAKA+E NP
Sbjct: 148 CGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIEFLNNP 189
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 47/69 (68%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
++F+ D+NL KDRF + +++S + +++S+ + NK+ +LT D + +ALR S ++E
Sbjct: 42 VDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALRSSAVVE 101
Query: 59 VTEDGTKVK 67
+ +GT+++
Sbjct: 102 LDLEGTRIR 110
>gi|355749516|gb|EHH53915.1| hypothetical protein EGM_14629 [Macaca fascicularis]
Length = 582
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 107/162 (66%), Gaps = 3/162 (1%)
Query: 103 RHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDP 160
R R KQ+ I ++F+ D+NL KDRF + +++S + +++S+ + NK+ +LT D
Sbjct: 28 RSRVKQVLADIAKQVDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDG 87
Query: 161 DDVVKALRKSKLLEVTEDGTKVRRTVVVQDKP-DVDECTIYVEKLPPEAEHDYIESVFSK 219
+ +ALR S ++E+ +GT++RR + ++P D DE T+YVE LP H +IE VF K
Sbjct: 88 KLIARALRSSAVVELDLEGTRIRRKKPLGERPKDEDERTVYVELLPKNVNHSWIERVFGK 147
Query: 220 YGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNP 261
G V Y+S+P +KSTG KGFAFVEF TKE+AAKA+E NP
Sbjct: 148 CGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIEFLNNP 189
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 47/69 (68%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
++F+ D+NL KDRF + +++S + +++S+ + NK+ +LT D + +ALR S ++E
Sbjct: 42 VDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALRSSAVVE 101
Query: 59 VTEDGTKVK 67
+ +GT+++
Sbjct: 102 LDLEGTRIR 110
>gi|297674198|ref|XP_002815121.1| PREDICTED: la-related protein 7 isoform 2 [Pongo abelii]
gi|297674200|ref|XP_002815122.1| PREDICTED: la-related protein 7 isoform 3 [Pongo abelii]
Length = 582
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 107/162 (66%), Gaps = 3/162 (1%)
Query: 103 RHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDP 160
R R KQ+ I ++F+ D+NL KDRF + +++S + +++S+ + NK+ +LT D
Sbjct: 28 RSRVKQVLADIAKQVDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDG 87
Query: 161 DDVVKALRKSKLLEVTEDGTKVRRTVVVQDKP-DVDECTIYVEKLPPEAEHDYIESVFSK 219
+ +ALR S ++E+ +GT++RR + ++P D DE T+YVE LP H +IE VF K
Sbjct: 88 KLIARALRSSAVVELDLEGTRIRRKKPLGERPKDEDERTVYVELLPKNVNHSWIERVFGK 147
Query: 220 YGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNP 261
G V Y+S+P +KSTG KGFAFVEF TKE+AAKA+E NP
Sbjct: 148 CGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIEFLNNP 189
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 47/69 (68%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
++F+ D+NL KDRF + +++S + +++S+ + NK+ +LT D + +ALR S ++E
Sbjct: 42 VDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALRSSAVVE 101
Query: 59 VTEDGTKVK 67
+ +GT+++
Sbjct: 102 LDLEGTRIR 110
>gi|410333473|gb|JAA35683.1| La ribonucleoprotein domain family, member 7 [Pan troglodytes]
Length = 582
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 107/162 (66%), Gaps = 3/162 (1%)
Query: 103 RHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDP 160
R R KQ+ I ++F+ D+NL KDRF + +++S + +++S+ + NK+ +LT D
Sbjct: 28 RSRVKQVLADIAKQVDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDG 87
Query: 161 DDVVKALRKSKLLEVTEDGTKVRRTVVVQDKP-DVDECTIYVEKLPPEAEHDYIESVFSK 219
+ +ALR S ++E+ +GT++RR + ++P D DE T+YVE LP H +IE VF K
Sbjct: 88 KLIARALRSSAVVELDLEGTRIRRKKPLGERPKDEDERTVYVELLPKNVNHSWIERVFGK 147
Query: 220 YGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNP 261
G V Y+S+P +KSTG KGFAFVEF TKE+AAKA+E NP
Sbjct: 148 CGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIEFLNNP 189
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 47/69 (68%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
++F+ D+NL KDRF + +++S + +++S+ + NK+ +LT D + +ALR S ++E
Sbjct: 42 VDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALRSSAVVE 101
Query: 59 VTEDGTKVK 67
+ +GT+++
Sbjct: 102 LDLEGTRIR 110
>gi|388490152|ref|NP_001253968.1| la-related protein 7 isoform 2 [Homo sapiens]
gi|119626689|gb|EAX06284.1| HDCMA18P protein, isoform CRA_b [Homo sapiens]
gi|187611076|gb|ACD13786.1| La-related protein 7 [Homo sapiens]
Length = 589
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 107/162 (66%), Gaps = 3/162 (1%)
Query: 103 RHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDP 160
R R KQ+ I ++F+ D+NL KDRF + +++S + +++S+ + NK+ +LT D
Sbjct: 35 RSRVKQVLADIAKQVDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDG 94
Query: 161 DDVVKALRKSKLLEVTEDGTKVRRTVVVQDKP-DVDECTIYVEKLPPEAEHDYIESVFSK 219
+ +ALR S ++E+ +GT++RR + ++P D DE T+YVE LP H +IE VF K
Sbjct: 95 KLIARALRSSAVVELDLEGTRIRRKKPLGERPKDEDERTVYVELLPKNVNHSWIERVFGK 154
Query: 220 YGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNP 261
G V Y+S+P +KSTG KGFAFVEF TKE+AAKA+E NP
Sbjct: 155 CGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIEFLNNP 196
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 47/69 (68%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
++F+ D+NL KDRF + +++S + +++S+ + NK+ +LT D + +ALR S ++E
Sbjct: 49 VDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALRSSAVVE 108
Query: 59 VTEDGTKVK 67
+ +GT+++
Sbjct: 109 LDLEGTRIR 117
>gi|301781244|ref|XP_002926038.1| PREDICTED: la-related protein 7-like [Ailuropoda melanoleuca]
Length = 580
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 107/162 (66%), Gaps = 3/162 (1%)
Query: 103 RHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDP 160
R R KQ+ I ++F+ D+NL KDRF + +++S + +++S+ + NK+ +LT D
Sbjct: 28 RSRVKQVLADIAKQVDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDG 87
Query: 161 DDVVKALRKSKLLEVTEDGTKVRRTVVVQDKP-DVDECTIYVEKLPPEAEHDYIESVFSK 219
+ +ALR S ++E+ +GT++RR + ++P D DE T+YVE LP H +IE VF K
Sbjct: 88 KLIARALRSSSVVELDLEGTRIRRKKPLGERPKDEDERTVYVELLPKNVNHSWIERVFGK 147
Query: 220 YGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNP 261
G V Y+S+P +KSTG KGFAFVEF TKE+AAKA+E NP
Sbjct: 148 CGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIEFLNNP 189
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 47/69 (68%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
++F+ D+NL KDRF + +++S + +++S+ + NK+ +LT D + +ALR S ++E
Sbjct: 42 VDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALRSSSVVE 101
Query: 59 VTEDGTKVK 67
+ +GT+++
Sbjct: 102 LDLEGTRIR 110
>gi|109809739|ref|NP_056269.1| la-related protein 7 isoform 1 [Homo sapiens]
gi|109809741|ref|NP_057732.2| la-related protein 7 isoform 1 [Homo sapiens]
gi|121945944|sp|Q4G0J3.1|LARP7_HUMAN RecName: Full=La-related protein 7; AltName: Full=La
ribonucleoprotein domain family member 7; AltName:
Full=P-TEFb-interaction protein for 7SK stability;
Short=PIP7S
gi|71052154|gb|AAH66945.1| LARP7 protein [Homo sapiens]
Length = 582
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 107/162 (66%), Gaps = 3/162 (1%)
Query: 103 RHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDP 160
R R KQ+ I ++F+ D+NL KDRF + +++S + +++S+ + NK+ +LT D
Sbjct: 28 RSRVKQVLADIAKQVDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDG 87
Query: 161 DDVVKALRKSKLLEVTEDGTKVRRTVVVQDKP-DVDECTIYVEKLPPEAEHDYIESVFSK 219
+ +ALR S ++E+ +GT++RR + ++P D DE T+YVE LP H +IE VF K
Sbjct: 88 KLIARALRSSAVVELDLEGTRIRRKKPLGERPKDEDERTVYVELLPKNVNHSWIERVFGK 147
Query: 220 YGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNP 261
G V Y+S+P +KSTG KGFAFVEF TKE+AAKA+E NP
Sbjct: 148 CGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIEFLNNP 189
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 47/69 (68%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
++F+ D+NL KDRF + +++S + +++S+ + NK+ +LT D + +ALR S ++E
Sbjct: 42 VDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALRSSAVVE 101
Query: 59 VTEDGTKVK 67
+ +GT+++
Sbjct: 102 LDLEGTRIR 110
>gi|296195729|ref|XP_002745505.1| PREDICTED: la-related protein 7 [Callithrix jacchus]
Length = 581
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 107/162 (66%), Gaps = 3/162 (1%)
Query: 103 RHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDP 160
R R KQ+ I ++F+ D+NL KDRF + +++S + +++S+ + NK+ +LT D
Sbjct: 28 RSRVKQVLADIAKQVDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDG 87
Query: 161 DDVVKALRKSKLLEVTEDGTKVRRTVVVQDKP-DVDECTIYVEKLPPEAEHDYIESVFSK 219
+ +ALR S ++E+ +GT++RR + ++P D DE T+YVE LP H +IE VF K
Sbjct: 88 KLIARALRSSAVVELDLEGTRIRRKKPLGERPKDEDERTVYVELLPKNVNHSWIERVFGK 147
Query: 220 YGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNP 261
G V Y+S+P +KSTG KGFAFVEF TKE+AAKA+E NP
Sbjct: 148 CGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIEFLNNP 189
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 47/69 (68%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
++F+ D+NL KDRF + +++S + +++S+ + NK+ +LT D + +ALR S ++E
Sbjct: 42 VDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALRSSAVVE 101
Query: 59 VTEDGTKVK 67
+ +GT+++
Sbjct: 102 LDLEGTRIR 110
>gi|355687549|gb|EHH26133.1| hypothetical protein EGK_16029, partial [Macaca mulatta]
Length = 529
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 107/162 (66%), Gaps = 3/162 (1%)
Query: 103 RHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDP 160
R R KQ+ I ++F+ D+NL KDRF + +++S + +++S+ + NK+ +LT D
Sbjct: 28 RSRVKQVLADIAKQVDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDG 87
Query: 161 DDVVKALRKSKLLEVTEDGTKVRRTVVVQDKP-DVDECTIYVEKLPPEAEHDYIESVFSK 219
+ +ALR S ++E+ +GT++RR + ++P D DE T+YVE LP H +IE VF K
Sbjct: 88 KLIARALRSSAVVELDLEGTRIRRKKPLGERPKDEDERTVYVELLPKNVNHSWIERVFGK 147
Query: 220 YGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNP 261
G V Y+S+P +KSTG KGFAFVEF TKE+AAKA+E NP
Sbjct: 148 CGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIEFLNNP 189
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 47/69 (68%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
++F+ D+NL KDRF + +++S + +++S+ + NK+ +LT D + +ALR S ++E
Sbjct: 42 VDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALRSSAVVE 101
Query: 59 VTEDGTKVK 67
+ +GT+++
Sbjct: 102 LDLEGTRIR 110
>gi|403275528|ref|XP_003929492.1| PREDICTED: la-related protein 7 [Saimiri boliviensis boliviensis]
Length = 581
Score = 140 bits (354), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 107/162 (66%), Gaps = 3/162 (1%)
Query: 103 RHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDP 160
R R KQ+ I ++F+ D+NL KDRF + +++S + +++S+ + NK+ +LT D
Sbjct: 28 RSRVKQVLADIAKQVDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDG 87
Query: 161 DDVVKALRKSKLLEVTEDGTKVRRTVVVQDKP-DVDECTIYVEKLPPEAEHDYIESVFSK 219
+ +ALR S ++E+ +GT++RR + ++P D DE T+YVE LP H +IE VF K
Sbjct: 88 KLIARALRSSAVVELDLEGTRIRRKKPLGERPKDEDERTVYVELLPKNVNHSWIERVFGK 147
Query: 220 YGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNP 261
G V Y+S+P +KSTG KGFAFVEF TKE+AAKA+E NP
Sbjct: 148 CGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIEFLNNP 189
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 47/69 (68%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
++F+ D+NL KDRF + +++S + +++S+ + NK+ +LT D + +ALR S ++E
Sbjct: 42 VDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALRSSAVVE 101
Query: 59 VTEDGTKVK 67
+ +GT+++
Sbjct: 102 LDLEGTRIR 110
>gi|198457325|ref|XP_002136248.1| GA27846 [Drosophila pseudoobscura pseudoobscura]
gi|198142554|gb|EDY71287.1| GA27846 [Drosophila pseudoobscura pseudoobscura]
Length = 211
Score = 140 bits (353), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 82/220 (37%), Positives = 116/220 (52%), Gaps = 21/220 (9%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEVT 60
MEFY D+NL KDRF + + + P + + +FL NK+ L D + KAL +LLE+
Sbjct: 1 MEFYFGDANLTKDRFLRRYVDQDPYVPLEIFLTFNKMKPLAEDVKQIAKALNNCQLLELD 60
Query: 61 EDGTKVKGNIIRHFLVPISMETEASDNVDKDLSDLQRKDG------------GGRHRKKQ 108
E KV+ R +P + D DK L D + D GGR RK+
Sbjct: 61 ESALKVR----RKIKMP-----DQRDVNDKTLYDAKETDAESSEPAKRDAAAGGRKRKRH 111
Query: 109 LYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALR 168
LY I + MEFY D+NL KDRF + + + P + + +FL NK+ L D + KAL
Sbjct: 112 LYNSIRSQMEFYFGDANLTKDRFLRRYVDQDPYVPLEIFLTFNKMKPLAEDVKQIAKALN 171
Query: 169 KSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEA 208
+LLE+ E KVRR + + D+ DV++ T+YVE LP E
Sbjct: 172 NCQLLELDESALKVRRKIKMPDQRDVNDKTLYVEALPAEG 211
>gi|328802713|ref|NP_001068652.2| la-related protein 7 [Bos taurus]
Length = 572
Score = 140 bits (352), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 71/162 (43%), Positives = 108/162 (66%), Gaps = 3/162 (1%)
Query: 103 RHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDP 160
R R KQ+ I+ ++F+ D+NL KDRF + +++S + +++S+ + NK+ +LT D
Sbjct: 26 RSRVKQVLADIVKQVDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDG 85
Query: 161 DDVVKALRKSKLLEVTEDGTKVRRTVVVQDKP-DVDECTIYVEKLPPEAEHDYIESVFSK 219
+ +AL+ S ++E+ +GT++RR + ++P D DE T+YVE LP H +IE VF K
Sbjct: 86 KLIARALKSSAVVELDLEGTRIRRKKPLGERPKDEDERTVYVELLPKNVNHSWIERVFGK 145
Query: 220 YGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNP 261
G V Y+S+P +KSTG KGFAFVEF TKE+AAKA+E NP
Sbjct: 146 CGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIEFLNNP 187
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 47/69 (68%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
++F+ D+NL KDRF + +++S + +++S+ + NK+ +LT D + +AL+ S ++E
Sbjct: 40 VDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALKSSAVVE 99
Query: 59 VTEDGTKVK 67
+ +GT+++
Sbjct: 100 LDLEGTRIR 108
>gi|296486777|tpg|DAA28890.1| TPA: La ribonucleoprotein domain family, member 7 [Bos taurus]
Length = 577
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 71/162 (43%), Positives = 108/162 (66%), Gaps = 3/162 (1%)
Query: 103 RHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDP 160
R R KQ+ I+ ++F+ D+NL KDRF + +++S + +++S+ + NK+ +LT D
Sbjct: 26 RSRVKQVLADIVKQVDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDG 85
Query: 161 DDVVKALRKSKLLEVTEDGTKVRRTVVVQDKP-DVDECTIYVEKLPPEAEHDYIESVFSK 219
+ +AL+ S ++E+ +GT++RR + ++P D DE T+YVE LP H +IE VF K
Sbjct: 86 KLIARALKSSAVVELDLEGTRIRRKKPLGERPKDEDERTVYVELLPKNVNHSWIERVFGK 145
Query: 220 YGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNP 261
G V Y+S+P +KSTG KGFAFVEF TKE+AAKA+E NP
Sbjct: 146 CGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIEFLNNP 187
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 47/69 (68%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
++F+ D+NL KDRF + +++S + +++S+ + NK+ +LT D + +AL+ S ++E
Sbjct: 40 VDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALKSSAVVE 99
Query: 59 VTEDGTKVK 67
+ +GT+++
Sbjct: 100 LDLEGTRIR 108
>gi|426231265|ref|XP_004009660.1| PREDICTED: la-related protein 7 [Ovis aries]
Length = 579
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 71/162 (43%), Positives = 108/162 (66%), Gaps = 3/162 (1%)
Query: 103 RHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDP 160
R R KQ+ I+ ++F+ D+NL KDRF + +++S + +++S+ + NK+ +LT D
Sbjct: 27 RSRVKQVLADIVKQVDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDG 86
Query: 161 DDVVKALRKSKLLEVTEDGTKVRRTVVVQDKP-DVDECTIYVEKLPPEAEHDYIESVFSK 219
+ +AL+ S ++E+ +GT++RR + ++P D DE T+YVE LP H +IE VF K
Sbjct: 87 KLIARALKSSAVVELDLEGTRIRRKKPLGERPKDEDERTVYVELLPKNVNHSWIERVFGK 146
Query: 220 YGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNP 261
G V Y+S+P +KSTG KGFAFVEF TKE+AAKA+E NP
Sbjct: 147 CGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIEFLNNP 188
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 47/69 (68%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
++F+ D+NL KDRF + +++S + +++S+ + NK+ +LT D + +AL+ S ++E
Sbjct: 41 VDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALKSSAVVE 100
Query: 59 VTEDGTKVK 67
+ +GT+++
Sbjct: 101 LDLEGTRIR 109
>gi|92096937|gb|AAI14862.1| LARP7 protein [Bos taurus]
Length = 221
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 71/162 (43%), Positives = 108/162 (66%), Gaps = 3/162 (1%)
Query: 103 RHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDP 160
R R KQ+ I+ ++F+ D+NL KDRF + +++S + +++S+ + NK+ +LT D
Sbjct: 26 RSRVKQVLADIVKQVDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDG 85
Query: 161 DDVVKALRKSKLLEVTEDGTKVRRTVVVQDKP-DVDECTIYVEKLPPEAEHDYIESVFSK 219
+ +AL+ S ++E+ +GT++RR + ++P D DE T+YVE LP H +IE VF K
Sbjct: 86 KLIARALKSSAVVELDLEGTRIRRKKPLGERPKDEDERTVYVELLPKNVNHSWIERVFGK 145
Query: 220 YGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNP 261
G V Y+S+P +KSTG KGFAFVEF TKE+AAKA+E NP
Sbjct: 146 CGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIEFLNNP 187
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 47/69 (68%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
++F+ D+NL KDRF + +++S + +++S+ + NK+ +LT D + +AL+ S ++E
Sbjct: 40 VDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALKSSAVVE 99
Query: 59 VTEDGTKVK 67
+ +GT+++
Sbjct: 100 LDLEGTRIR 108
>gi|351707529|gb|EHB10448.1| La-related protein 7 [Heterocephalus glaber]
Length = 577
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 71/162 (43%), Positives = 107/162 (66%), Gaps = 3/162 (1%)
Query: 103 RHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDP 160
R R KQ+ I ++F+ D+NL KDRF + +++S + +++S+ + NK+ +LT D
Sbjct: 24 RSRVKQVLADIAKQVDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDG 83
Query: 161 DDVVKALRKSKLLEVTEDGTKVRRTVVVQDKP-DVDECTIYVEKLPPEAEHDYIESVFSK 219
+ +AL+ S ++E+ +GT++RR + ++P D DE T+YVE LP H +IE VF K
Sbjct: 84 KLIARALKSSAIVELDLEGTRIRRKKPLGERPKDEDERTVYVELLPKNVNHSWIEKVFGK 143
Query: 220 YGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNP 261
G V Y+S+P +KSTG KGFAFVEF TKE+AAKA+E NP
Sbjct: 144 CGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIEFLNNP 185
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 47/69 (68%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
++F+ D+NL KDRF + +++S + +++S+ + NK+ +LT D + +AL+ S ++E
Sbjct: 38 VDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALKSSAIVE 97
Query: 59 VTEDGTKVK 67
+ +GT+++
Sbjct: 98 LDLEGTRIR 106
>gi|395542246|ref|XP_003773044.1| PREDICTED: la-related protein 7 [Sarcophilus harrisii]
Length = 650
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 107/162 (66%), Gaps = 3/162 (1%)
Query: 103 RHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDP 160
R R KQ+ I ++F+ D+NL KDRF + +++S + +++S+ + NK+ +LT D
Sbjct: 88 RSRVKQVLSDIAKQVDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDG 147
Query: 161 DDVVKALRKSKLLEVTEDGTKVRRTVVVQDKP-DVDECTIYVEKLPPEAEHDYIESVFSK 219
+ +AL+ S ++E+ +GT+VRR + +KP DVD+ T+YVE LP H +IE VF K
Sbjct: 148 KLIARALKSSSVVELDLEGTRVRRRQPLGEKPKDVDDRTVYVELLPKNVNHSWIERVFGK 207
Query: 220 YGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNP 261
G V Y+S+P +KSTG KGFAFVEF TKE+A KA+E NP
Sbjct: 208 CGNVVYISIPHYKSTGDPKGFAFVEFETKEQADKAIEFLNNP 249
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 47/69 (68%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
++F+ D+NL KDRF + +++S + +++S+ + NK+ +LT D + +AL+ S ++E
Sbjct: 102 VDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALKSSSVVE 161
Query: 59 VTEDGTKVK 67
+ +GT+V+
Sbjct: 162 LDLEGTRVR 170
>gi|154757386|gb|AAI51801.1| LARP7 protein [Bos taurus]
Length = 221
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 71/162 (43%), Positives = 108/162 (66%), Gaps = 3/162 (1%)
Query: 103 RHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDP 160
R R KQ+ I+ ++F+ D+NL KDRF + +++S + +++S+ + NK+ +LT D
Sbjct: 26 RSRVKQVLADIVKQVDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDG 85
Query: 161 DDVVKALRKSKLLEVTEDGTKVRRTVVVQDKP-DVDECTIYVEKLPPEAEHDYIESVFSK 219
+ +AL+ S ++E+ +GT++RR + ++P D DE T+YVE LP H +IE VF K
Sbjct: 86 KLIARALKSSAVVELDLEGTRIRRKKPLGERPKDEDERTVYVELLPKNVNHSWIERVFGK 145
Query: 220 YGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNP 261
G V Y+S+P +KSTG KGFAFVEF TKE+AAKA+E NP
Sbjct: 146 CGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIEFLNNP 187
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 47/69 (68%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
++F+ D+NL KDRF + +++S + +++S+ + NK+ +LT D + +AL+ S ++E
Sbjct: 40 VDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALKSSAVVE 99
Query: 59 VTEDGTKVK 67
+ +GT+++
Sbjct: 100 LDLEGTRIR 108
>gi|417402900|gb|JAA48280.1| Putative la-related protein 7 [Desmodus rotundus]
Length = 574
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 107/162 (66%), Gaps = 3/162 (1%)
Query: 103 RHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDP 160
R R KQ+ I ++F+ D+NL KDRF + +++S + +++S+ + NK+ +LT D
Sbjct: 27 RSRVKQVLADITKQVDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDE 86
Query: 161 DDVVKALRKSKLLEVTEDGTKVRRTVVVQDKP-DVDECTIYVEKLPPEAEHDYIESVFSK 219
+ +AL+ S ++E+ +GT+VRR + ++P D DE T+YVE LP H +IE VF K
Sbjct: 87 KLIARALKSSAVVELDLEGTRVRRKKPLGERPQDEDERTVYVELLPKNVNHSWIERVFGK 146
Query: 220 YGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNP 261
G V Y+S+P +KSTG KGFAFVEF TKE+AAKA+E NP
Sbjct: 147 CGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIEFLNNP 188
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 47/69 (68%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
++F+ D+NL KDRF + +++S + +++S+ + NK+ +LT D + +AL+ S ++E
Sbjct: 41 VDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDEKLIARALKSSAVVE 100
Query: 59 VTEDGTKVK 67
+ +GT+V+
Sbjct: 101 LDLEGTRVR 109
>gi|41053963|ref|NP_956224.1| la-related protein 7 [Danio rerio]
gi|82241469|sp|Q7ZWE3.1|LARP7_DANRE RecName: Full=La-related protein 7; AltName: Full=La
ribonucleoprotein domain family member 7
gi|29436467|gb|AAH49455.1| Zgc:56476 [Danio rerio]
Length = 555
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 114/183 (62%), Gaps = 4/183 (2%)
Query: 86 DNVDKDLSDLQRKDGGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IE 143
D DLS+ + + R R KQL + +EF+ D NL KDRF ++++S + I+
Sbjct: 19 DTACADLSEKKDNEKKKRSRVKQLLSDVKKQVEFWFGDVNLHKDRFMKSIIEQSRDGYID 78
Query: 144 VSVFLKCNKLARLTHDPDDVVKALRKSKLLEVTEDGTKVRRTVVVQDKP-DVDECTIYVE 202
++V N++ LT D + +AL+ S ++EV ++GT++RR + + P DVD T+YVE
Sbjct: 79 IAVLTTFNRMKNLTADVKLIARALKNSTIVEVNDEGTRIRRKEPLGETPKDVDSRTVYVE 138
Query: 203 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNPC 262
LP H ++E VFSK G V Y+S+P++KST KGFAFVEF T+E+A KA+E+ NP
Sbjct: 139 LLPKTVTHIWLERVFSKCGHVVYISIPRYKSTRHSKGFAFVEFETQEQAQKAVEMLNNP- 197
Query: 263 PPD 265
P D
Sbjct: 198 PED 200
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 45/69 (65%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
+EF+ D NL KDRF ++++S + I+++V N++ LT D + +AL+ S ++E
Sbjct: 50 VEFWFGDVNLHKDRFMKSIIEQSRDGYIDIAVLTTFNRMKNLTADVKLIARALKNSTIVE 109
Query: 59 VTEDGTKVK 67
V ++GT+++
Sbjct: 110 VNDEGTRIR 118
>gi|350596592|ref|XP_003361398.2| PREDICTED: la-related protein 7 [Sus scrofa]
Length = 521
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 71/162 (43%), Positives = 107/162 (66%), Gaps = 3/162 (1%)
Query: 103 RHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDP 160
R R KQ+ I ++F+ D+NL KDRF + +++S + +++S+ + NK+ +LT D
Sbjct: 28 RSRVKQVLADIAKQVDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDR 87
Query: 161 DDVVKALRKSKLLEVTEDGTKVRRTVVVQDKP-DVDECTIYVEKLPPEAEHDYIESVFSK 219
+ +AL+ S ++E+ +GT++RR + ++P D DE T+YVE LP H +IE VF K
Sbjct: 88 KLIARALKSSAVVELDLEGTRIRRKKPLGERPKDEDERTVYVELLPKNVNHSWIERVFGK 147
Query: 220 YGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNP 261
G V Y+S+P +KSTG KGFAFVEF TKE+AAKA+E NP
Sbjct: 148 CGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIEFLNNP 189
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 47/69 (68%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
++F+ D+NL KDRF + +++S + +++S+ + NK+ +LT D + +AL+ S ++E
Sbjct: 42 VDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDRKLIARALKSSAVVE 101
Query: 59 VTEDGTKVK 67
+ +GT+++
Sbjct: 102 LDLEGTRIR 110
>gi|410956996|ref|XP_003985121.1| PREDICTED: LOW QUALITY PROTEIN: la-related protein 7 [Felis catus]
Length = 572
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 71/162 (43%), Positives = 107/162 (66%), Gaps = 3/162 (1%)
Query: 103 RHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDP 160
R R KQ+ I ++F+ D+NL KDRF + +++S + +++S+ + NK+ +LT D
Sbjct: 28 RSRVKQVLADIAKQVDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDG 87
Query: 161 DDVVKALRKSKLLEVTEDGTKVRRTVVVQDKP-DVDECTIYVEKLPPEAEHDYIESVFSK 219
+ +AL+ S ++E+ +GT++RR + ++P D DE T+YVE LP H +IE VF K
Sbjct: 88 KLIARALKSSSVVELDLEGTRIRRKKPLGERPKDEDERTVYVELLPKNVNHSWIERVFGK 147
Query: 220 YGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNP 261
G V Y+S+P +KSTG KGFAFVEF TKE+AAKA+E NP
Sbjct: 148 CGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIEFLNNP 189
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 47/69 (68%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
++F+ D+NL KDRF + +++S + +++S+ + NK+ +LT D + +AL+ S ++E
Sbjct: 42 VDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALKSSSVVE 101
Query: 59 VTEDGTKVK 67
+ +GT+++
Sbjct: 102 LDLEGTRIR 110
>gi|126331139|ref|XP_001362205.1| PREDICTED: la-related protein 7 isoform 1 [Monodelphis domestica]
Length = 597
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 107/162 (66%), Gaps = 3/162 (1%)
Query: 103 RHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDP 160
R R KQ+ I ++F+ D+NL KDRF + +++S + +++S+ + NK+ +LT D
Sbjct: 28 RSRVKQVLSDIAKQVDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDG 87
Query: 161 DDVVKALRKSKLLEVTEDGTKVRRTVVVQDKP-DVDECTIYVEKLPPEAEHDYIESVFSK 219
+ +AL+ S ++E+ +GT+VRR + +KP DVD+ T+YVE LP H +IE VF K
Sbjct: 88 KLIARALKSSSVVELDLEGTRVRRRQPLGEKPKDVDDRTVYVELLPKNVNHSWIERVFGK 147
Query: 220 YGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNP 261
G V Y+S+P +KSTG KGFAFVEF TKE+A KA+E NP
Sbjct: 148 CGNVVYISIPHYKSTGDPKGFAFVEFETKEQADKAIEFLNNP 189
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 47/69 (68%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
++F+ D+NL KDRF + +++S + +++S+ + NK+ +LT D + +AL+ S ++E
Sbjct: 42 VDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALKSSSVVE 101
Query: 59 VTEDGTKVK 67
+ +GT+V+
Sbjct: 102 LDLEGTRVR 110
>gi|345795869|ref|XP_535698.3| PREDICTED: LOW QUALITY PROTEIN: la-related protein 7 [Canis lupus
familiaris]
Length = 580
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/162 (43%), Positives = 107/162 (66%), Gaps = 3/162 (1%)
Query: 103 RHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDP 160
R R KQ+ I ++F+ D+NL KDRF + +++S + +++S+ + NK+ +LT D
Sbjct: 27 RSRVKQVLADIAKQVDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDG 86
Query: 161 DDVVKALRKSKLLEVTEDGTKVRRTVVVQDKP-DVDECTIYVEKLPPEAEHDYIESVFSK 219
+ +AL+ S ++E+ +GT++RR + ++P D DE T+YVE LP H +IE VF K
Sbjct: 87 KLIARALKSSSVVELDLEGTRIRRKKPLGERPKDEDERTVYVELLPKNVNHSWIERVFGK 146
Query: 220 YGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNP 261
G V Y+S+P +KSTG KGFAFVEF TKE+AAKA+E NP
Sbjct: 147 CGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIEFLNNP 188
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 47/69 (68%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
++F+ D+NL KDRF + +++S + +++S+ + NK+ +LT D + +AL+ S ++E
Sbjct: 41 VDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALKSSSVVE 100
Query: 59 VTEDGTKVK 67
+ +GT+++
Sbjct: 101 LDLEGTRIR 109
>gi|344277322|ref|XP_003410451.1| PREDICTED: la-related protein 7 [Loxodonta africana]
Length = 581
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/162 (43%), Positives = 107/162 (66%), Gaps = 3/162 (1%)
Query: 103 RHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDP 160
R R KQ+ I ++F+ D+NL KDRF + +++S + +++S+ + NK+ +LT D
Sbjct: 28 RSRVKQVLADIAKQVDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDG 87
Query: 161 DDVVKALRKSKLLEVTEDGTKVRRTVVVQDKP-DVDECTIYVEKLPPEAEHDYIESVFSK 219
+ +AL+ S ++E+ +GT++RR + ++P D DE T+YVE LP H +IE VF K
Sbjct: 88 KLIARALKSSAVVELDLEGTRIRRKKPLGERPKDEDERTVYVELLPKNVNHSWIERVFGK 147
Query: 220 YGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNP 261
G V Y+S+P +KSTG KGFAFVEF TKE+AAKA+E NP
Sbjct: 148 CGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIEFLNNP 189
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 47/69 (68%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
++F+ D+NL KDRF + +++S + +++S+ + NK+ +LT D + +AL+ S ++E
Sbjct: 42 VDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALKSSAVVE 101
Query: 59 VTEDGTKVK 67
+ +GT+++
Sbjct: 102 LDLEGTRIR 110
>gi|395851325|ref|XP_003798212.1| PREDICTED: la-related protein 7 [Otolemur garnettii]
Length = 584
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/162 (43%), Positives = 107/162 (66%), Gaps = 3/162 (1%)
Query: 103 RHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDP 160
R R KQ+ I ++F+ D+NL KDRF + +++S + +++S+ + NK+ +LT D
Sbjct: 28 RSRVKQVLADIAKQVDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDG 87
Query: 161 DDVVKALRKSKLLEVTEDGTKVRRTVVVQDKP-DVDECTIYVEKLPPEAEHDYIESVFSK 219
+ +AL+ S ++E+ +GT++RR + ++P D DE T+YVE LP H +IE VF K
Sbjct: 88 KLIARALKSSAVVELDLEGTRIRRKKPLGERPKDEDERTVYVELLPKNVNHSWIERVFGK 147
Query: 220 YGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNP 261
G V Y+S+P +KSTG KGFAFVEF TKE+AAKA+E NP
Sbjct: 148 CGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIEFLNNP 189
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 47/69 (68%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
++F+ D+NL KDRF + +++S + +++S+ + NK+ +LT D + +AL+ S ++E
Sbjct: 42 VDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALKSSAVVE 101
Query: 59 VTEDGTKVK 67
+ +GT+++
Sbjct: 102 LDLEGTRIR 110
>gi|345091040|ref|NP_001230744.1| La ribonucleoprotein domain family, member 7 [Sus scrofa]
Length = 583
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/162 (43%), Positives = 107/162 (66%), Gaps = 3/162 (1%)
Query: 103 RHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDP 160
R R KQ+ I ++F+ D+NL KDRF + +++S + +++S+ + NK+ +LT D
Sbjct: 28 RSRVKQVLADIAKQVDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDR 87
Query: 161 DDVVKALRKSKLLEVTEDGTKVRRTVVVQDKP-DVDECTIYVEKLPPEAEHDYIESVFSK 219
+ +AL+ S ++E+ +GT++RR + ++P D DE T+YVE LP H +IE VF K
Sbjct: 88 KLIARALKSSAVVELDLEGTRIRRKKPLGERPKDEDERTVYVELLPKNVNHSWIERVFGK 147
Query: 220 YGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNP 261
G V Y+S+P +KSTG KGFAFVEF TKE+AAKA+E NP
Sbjct: 148 CGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIEFLNNP 189
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 47/69 (68%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
++F+ D+NL KDRF + +++S + +++S+ + NK+ +LT D + +AL+ S ++E
Sbjct: 42 VDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDRKLIARALKSSAVVE 101
Query: 59 VTEDGTKVK 67
+ +GT+++
Sbjct: 102 LDLEGTRIR 110
>gi|149698277|ref|XP_001503501.1| PREDICTED: la-related protein 7 [Equus caballus]
Length = 582
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/162 (43%), Positives = 107/162 (66%), Gaps = 3/162 (1%)
Query: 103 RHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDP 160
R R KQ+ I ++F+ D+NL KDRF + +++S + +++S+ + NK+ +LT D
Sbjct: 28 RSRVKQVLADIAKQVDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDG 87
Query: 161 DDVVKALRKSKLLEVTEDGTKVRRTVVVQDKP-DVDECTIYVEKLPPEAEHDYIESVFSK 219
+ +AL+ S ++E+ +GT++RR + ++P D DE T+YVE LP H +IE VF K
Sbjct: 88 KLIARALKSSAVVELDLEGTRIRRKKPLGERPKDEDERTVYVELLPKNVNHSWIERVFGK 147
Query: 220 YGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNP 261
G V Y+S+P +KSTG KGFAFVEF TKE+AAKA+E NP
Sbjct: 148 CGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIEFLNNP 189
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 47/69 (68%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
++F+ D+NL KDRF + +++S + +++S+ + NK+ +LT D + +AL+ S ++E
Sbjct: 42 VDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALKSSAVVE 101
Query: 59 VTEDGTKVK 67
+ +GT+++
Sbjct: 102 LDLEGTRIR 110
>gi|348564517|ref|XP_003468051.1| PREDICTED: la-related protein 7-like [Cavia porcellus]
Length = 571
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/162 (43%), Positives = 107/162 (66%), Gaps = 3/162 (1%)
Query: 103 RHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDP 160
R R KQ+ I ++F+ D+NL KDRF + +++S + +++S+ + NK+ +LT D
Sbjct: 24 RSRVKQVLADIAKQVDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDG 83
Query: 161 DDVVKALRKSKLLEVTEDGTKVRRTVVVQDKP-DVDECTIYVEKLPPEAEHDYIESVFSK 219
+ +AL+ S ++E+ +GT++RR + ++P D DE T+YVE LP H +IE VF K
Sbjct: 84 KLIARALKSSAVVELDLEGTRIRRKKPLGERPKDEDERTVYVELLPKNVNHSWIERVFGK 143
Query: 220 YGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNP 261
G V Y+S+P +KSTG KGFAFVEF TKE+AAKA+E NP
Sbjct: 144 CGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIEFLNNP 185
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 47/69 (68%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
++F+ D+NL KDRF + +++S + +++S+ + NK+ +LT D + +AL+ S ++E
Sbjct: 38 VDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALKSSAVVE 97
Query: 59 VTEDGTKVK 67
+ +GT+++
Sbjct: 98 LDLEGTRIR 106
>gi|260837431|ref|XP_002613707.1| hypothetical protein BRAFLDRAFT_271338 [Branchiostoma floridae]
gi|229299096|gb|EEN69716.1| hypothetical protein BRAFLDRAFT_271338 [Branchiostoma floridae]
Length = 231
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 75/160 (46%), Positives = 106/160 (66%), Gaps = 4/160 (2%)
Query: 109 LYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKA 166
L + MEFY SD+NL +DRF + +++ E I++SV L NK+ +LT DP VVK
Sbjct: 32 LQNAVREQMEFYFSDANLHRDRFLKKEMEKEKEGWIDLSVILSFNKMKQLTSDPKMVVKC 91
Query: 167 LRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYV 226
LR S+LL+ + TKVRRT + + +DE T+YVE LP H++I++ FS GKV Y+
Sbjct: 92 LRNSELLQANTEKTKVRRTKPLAEPVQMDERTVYVECLPRTVTHEWIKTTFSVCGKVAYI 151
Query: 227 SLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNPCPPDY 266
SLP+FK++G KGFAF+EF +EEA KA ++ N PPD+
Sbjct: 152 SLPRFKTSGDTKGFAFIEFEKQEEAEKACKMLNN--PPDH 189
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 47/69 (68%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
MEFY SD+NL +DRF + +++ E I++SV L NK+ +LT DP VVK LR S+LL+
Sbjct: 40 MEFYFSDANLHRDRFLKKEMEKEKEGWIDLSVILSFNKMKQLTSDPKMVVKCLRNSELLQ 99
Query: 59 VTEDGTKVK 67
+ TKV+
Sbjct: 100 ANTEKTKVR 108
>gi|380772503|gb|AFE61891.1| Larp7 [Mus musculus]
Length = 570
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 74/185 (40%), Positives = 119/185 (64%), Gaps = 5/185 (2%)
Query: 80 METEASDNVDKDLSDLQRKDGGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQES 139
METE +++ S ++++ R R KQ+ I ++F+ D+NL KD+F + +++S
Sbjct: 1 METENQKTMEE--STERKEEKKKRSRVKQVLADIAKQVDFWFGDANLHKDKFLREQIEKS 58
Query: 140 PE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEVTEDGTKVRRTVVVQDKP-DVDE 196
+ +++S+ + NK+ +LT D + +AL+ S ++E+ +GT++RR + ++P D +E
Sbjct: 59 RDGYVDISLLVSFNKMKKLTTDGKLIARALKSSSVVELDLEGTRIRRKKPLGERPKDEEE 118
Query: 197 CTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
T+YVE LP H +IE VF K G V Y+S+P +KSTG KGFAFVEF TKE+AAKA+E
Sbjct: 119 RTVYVELLPKNVTHSWIERVFGKCGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIE 178
Query: 257 LGLNP 261
NP
Sbjct: 179 FLNNP 183
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 47/69 (68%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
++F+ D+NL KD+F + +++S + +++S+ + NK+ +LT D + +AL+ S ++E
Sbjct: 36 VDFWFGDANLHKDKFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALKSSSVVE 95
Query: 59 VTEDGTKVK 67
+ +GT+++
Sbjct: 96 LDLEGTRIR 104
>gi|410907089|ref|XP_003967024.1| PREDICTED: la-related protein 7-like [Takifugu rubripes]
Length = 519
Score = 137 bits (344), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 73/162 (45%), Positives = 105/162 (64%), Gaps = 3/162 (1%)
Query: 103 RHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDP 160
R R KQL + +EF+ D NL KDRF ++++ES + +++S+ N++ +LT D
Sbjct: 21 RSRVKQLLADVKKQVEFWFGDVNLHKDRFLRKVMEESEDGYVDLSLLTSFNRMKKLTTDT 80
Query: 161 DDVVKALRKSKLLEVTEDGTKVRRTVVVQDKP-DVDECTIYVEKLPPEAEHDYIESVFSK 219
V +AL+ S ++EV +G KVRR V P DVD T+YVE LP + H +IE VF+K
Sbjct: 81 KLVARALKNSSVVEVNLEGNKVRRRFPVGAAPTDVDSRTVYVELLPKDVTHGWIERVFAK 140
Query: 220 YGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNP 261
G V YVS+P++KS+G KGFAFVEF +EEA +A+E+ NP
Sbjct: 141 CGTVVYVSVPRYKSSGDPKGFAFVEFEKEEEARQAIEVLNNP 182
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 45/69 (65%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
+EF+ D NL KDRF ++++ES + +++S+ N++ +LT D V +AL+ S ++E
Sbjct: 35 VEFWFGDVNLHKDRFLRKVMEESEDGYVDLSLLTSFNRMKKLTTDTKLVARALKNSSVVE 94
Query: 59 VTEDGTKVK 67
V +G KV+
Sbjct: 95 VNLEGNKVR 103
>gi|427789395|gb|JAA60149.1| Hypothetical protein [Rhipicephalus pulchellus]
Length = 492
Score = 137 bits (344), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 64/140 (45%), Positives = 98/140 (70%), Gaps = 2/140 (1%)
Query: 117 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 174
MEFY SD+NLRKDR+ + L+ E +++ VFL +K+ LT D D+ A+ SKLL
Sbjct: 1 MEFYFSDANLRKDRYMNDLVMRDEEGYVDLDVFLTFHKIRALTSDVKDIAGAIATSKLLR 60
Query: 175 VTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKST 234
+ E+ +VRR + K DVDECT+YVE+LP A+H +++ VFS++G+V YVSLP+++
Sbjct: 61 MDEEHKRVRRYAELATKVDVDECTLYVERLPLHADHAWLKGVFSRHGQVVYVSLPRYRHN 120
Query: 235 GKLKGFAFVEFSTKEEAAKA 254
++KGFAF+EF++ E+ +A
Sbjct: 121 NRIKGFAFIEFASPEDVDRA 140
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 44/69 (63%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
MEFY SD+NLRKDR+ + L+ E +++ VFL +K+ LT D D+ A+ SKLL
Sbjct: 1 MEFYFSDANLRKDRYMNDLVMRDEEGYVDLDVFLTFHKIRALTSDVKDIAGAIATSKLLR 60
Query: 59 VTEDGTKVK 67
+ E+ +V+
Sbjct: 61 MDEEHKRVR 69
>gi|345326822|ref|XP_001507431.2| PREDICTED: la-related protein 7 [Ornithorhynchus anatinus]
Length = 678
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 69/160 (43%), Positives = 107/160 (66%), Gaps = 3/160 (1%)
Query: 105 RKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDD 162
R KQ+ I ++F+ D+NL KDRF + +++S + +++S+ + NK+ +LT D
Sbjct: 30 RVKQVLSDIAKQVDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKL 89
Query: 163 VVKALRKSKLLEVTEDGTKVRRTVVVQDKP-DVDECTIYVEKLPPEAEHDYIESVFSKYG 221
+ +AL+ S ++E+ +GT++RR + ++P DVD+ T+YVE LP + H +IE VF K G
Sbjct: 90 IARALKSSAVVELDLEGTRIRRRQPLGERPKDVDDRTVYVELLPKDVNHSWIERVFGKCG 149
Query: 222 KVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNP 261
V Y+S+P +KSTG KGFAFVEF TKE+A KA+E NP
Sbjct: 150 NVVYISIPHYKSTGDPKGFAFVEFETKEQADKAIEFLNNP 189
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 47/69 (68%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
++F+ D+NL KDRF + +++S + +++S+ + NK+ +LT D + +AL+ S ++E
Sbjct: 42 VDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALKSSAVVE 101
Query: 59 VTEDGTKVK 67
+ +GT+++
Sbjct: 102 LDLEGTRIR 110
>gi|156360689|ref|XP_001625158.1| predicted protein [Nematostella vectensis]
gi|156211977|gb|EDO33058.1| predicted protein [Nematostella vectensis]
Length = 835
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/164 (43%), Positives = 108/164 (65%), Gaps = 4/164 (2%)
Query: 100 GGGRHRK--KQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLAR 155
G +H+K K L Q+ ++FY SDS L KDRF Q ++ P+ + +S NK+ +
Sbjct: 14 GHQKHKKRTKLLVNQLKEQIDFYFSDSALLKDRFLKQQIENHPDGYVAISTIASFNKIKQ 73
Query: 156 LTHDPDDVVKALRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIES 215
+T D V KA++ S+ LE+ EDGT VRR + +VD T+YVEKLP A+HD+++
Sbjct: 74 MTDDIKLVKKAMKLSQQLELNEDGTMVRRMAPLPQPRNVDAETVYVEKLPFHADHDWLKK 133
Query: 216 VFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGL 259
VFS++GKV YVSLP+FK G++KGFAF+EF +K++A ++ G+
Sbjct: 134 VFSEFGKVLYVSLPRFKHNGEIKGFAFIEFESKQQAEHVVQDGV 177
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
++FY SDS L KDRF Q ++ P+ + +S NK+ ++T D V KA++ S+ LE
Sbjct: 33 IDFYFSDSALLKDRFLKQQIENHPDGYVAISTIASFNKIKQMTDDIKLVKKAMKLSQQLE 92
Query: 59 VTEDGTKVK 67
+ EDGT V+
Sbjct: 93 LNEDGTMVR 101
>gi|390333306|ref|XP_793889.3| PREDICTED: uncharacterized protein LOC589145 [Strongylocentrotus
purpuratus]
Length = 643
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/156 (48%), Positives = 101/156 (64%), Gaps = 4/156 (2%)
Query: 113 IMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKS 170
+ +EFY SD+NLRKDRF Q + +S + I V + NKL +T D V+ A++ S
Sbjct: 38 VCQQIEFYFSDANLRKDRFLKQEMAKSKDGYISVDIIANFNKLLSMTEDRKMVISAIQLS 97
Query: 171 KLLEVTEDGTKV-RRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLP 229
+L+++ED V RR + K D D+CT+YVE LP +A+HD + FS GKV YVSLP
Sbjct: 98 AILKLSEDQLFVKRRKTLKPPKYDPDDCTVYVECLPKKADHDLLRKAFSYCGKVVYVSLP 157
Query: 230 KFKSTGKLKGFAFVEFSTKEEAAKALELGLNPCPPD 265
++KST +KGFAF+EF T EEA +A EL NP PPD
Sbjct: 158 RYKSTSDIKGFAFIEFETPEEADQACELMNNP-PPD 192
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 41/64 (64%), Gaps = 2/64 (3%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
+EFY SD+NLRKDRF Q + +S + I V + NKL +T D V+ A++ S +L+
Sbjct: 42 IEFYFSDANLRKDRFLKQEMAKSKDGYISVDIIANFNKLLSMTEDRKMVISAIQLSAILK 101
Query: 59 VTED 62
++ED
Sbjct: 102 LSED 105
>gi|291235177|ref|XP_002737523.1| PREDICTED: La autoantigen-like [Saccoglossus kowalevskii]
Length = 709
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/166 (45%), Positives = 106/166 (63%), Gaps = 5/166 (3%)
Query: 103 RHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDP 160
R R K L QI N +EFY SD+NLRKDRF Q + + E ++V V L NKL L+ D
Sbjct: 52 RRRVKNLISQIKNQLEFYFSDANLRKDRFLKQHMDSNEEGFVDVDVLLLFNKLKSLSEDS 111
Query: 161 DDVVKALRKSKLLEVTEDGTKV-RRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSK 219
+V+A S LL+V +G K+ R+ + K ++D+ T+Y E LP H+++++VF
Sbjct: 112 KLIVRAAIDSTLLKVNLEGNKIGRKKPLSAPKYNIDDLTVYAECLPSNTSHEWLKTVFDA 171
Query: 220 YGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNPCPPD 265
YG VTYVS+P++K+TG +KGFAF+EFST +EA A + N PPD
Sbjct: 172 YGTVTYVSIPRYKTTGDIKGFAFIEFSTPQEAQLACKKLNN--PPD 215
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 2/68 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
+EFY SD+NLRKDRF Q + + E ++V V L NKL L+ D +V+A S LL+
Sbjct: 66 LEFYFSDANLRKDRFLKQHMDSNEEGFVDVDVLLLFNKLKSLSEDSKLIVRAAIDSTLLK 125
Query: 59 VTEDGTKV 66
V +G K+
Sbjct: 126 VNLEGNKI 133
>gi|53134741|emb|CAG32359.1| hypothetical protein RCJMB04_23k13 [Gallus gallus]
Length = 233
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/160 (43%), Positives = 105/160 (65%), Gaps = 3/160 (1%)
Query: 105 RKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDD 162
R KQ+ I ++F+ D NL KDRF + +++S + +++S+ + NK+ +LT D
Sbjct: 32 RVKQVLADIAKQVDFWFGDVNLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKL 91
Query: 163 VVKALRKSKLLEVTEDGTKVRRTVVVQDKP-DVDECTIYVEKLPPEAEHDYIESVFSKYG 221
+ +A++ S ++E+ +GT++RR + ++P DVD T+YVE LP H +IE VF K G
Sbjct: 92 IARAVKSSSVVELDLEGTRIRRRRPLGERPKDVDSRTVYVELLPKNVNHSWIERVFGKCG 151
Query: 222 KVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNP 261
V YVS+P++KSTG KGFAFVEF TKE+A KA+E NP
Sbjct: 152 NVVYVSIPRYKSTGDPKGFAFVEFETKEQAEKAIEFLNNP 191
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 46/69 (66%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
++F+ D NL KDRF + +++S + +++S+ + NK+ +LT D + +A++ S ++E
Sbjct: 44 VDFWFGDVNLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARAVKSSSVVE 103
Query: 59 VTEDGTKVK 67
+ +GT+++
Sbjct: 104 LDLEGTRIR 112
>gi|363733597|ref|XP_420643.3| PREDICTED: la-related protein 7 [Gallus gallus]
Length = 647
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 69/160 (43%), Positives = 105/160 (65%), Gaps = 3/160 (1%)
Query: 105 RKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDD 162
R KQ+ I ++F+ D NL KDRF + +++S + +++S+ + NK+ +LT D
Sbjct: 84 RVKQVLADIAKQVDFWFGDVNLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKL 143
Query: 163 VVKALRKSKLLEVTEDGTKVRRTVVVQDKP-DVDECTIYVEKLPPEAEHDYIESVFSKYG 221
+ +A++ S ++E+ +GT++RR + ++P DVD T+YVE LP H +IE VF K G
Sbjct: 144 IARAVKSSSVVELDLEGTRIRRRRPLGERPKDVDSRTVYVELLPKNVNHSWIERVFGKCG 203
Query: 222 KVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNP 261
V YVS+P++KSTG KGFAFVEF TKE+A KA+E NP
Sbjct: 204 NVVYVSIPRYKSTGDPKGFAFVEFETKEQAEKAIEFLNNP 243
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 46/69 (66%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
++F+ D NL KDRF + +++S + +++S+ + NK+ +LT D + +A++ S ++E
Sbjct: 96 VDFWFGDVNLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARAVKSSSVVE 155
Query: 59 VTEDGTKVK 67
+ +GT+++
Sbjct: 156 LDLEGTRIR 164
>gi|326919006|ref|XP_003205775.1| PREDICTED: la-related protein 7-like [Meleagris gallopavo]
Length = 597
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 69/160 (43%), Positives = 105/160 (65%), Gaps = 3/160 (1%)
Query: 105 RKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDD 162
R KQ+ I ++F+ D NL KDRF + +++S + +++S+ + NK+ +LT D
Sbjct: 32 RVKQVLADIAKQVDFWFGDVNLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKL 91
Query: 163 VVKALRKSKLLEVTEDGTKVRRTVVVQDKP-DVDECTIYVEKLPPEAEHDYIESVFSKYG 221
+ +A++ S ++E+ +GT++RR + ++P DVD T+YVE LP H +IE VF K G
Sbjct: 92 IARAVKSSSVVELDLEGTRIRRRQPLGEQPKDVDSRTVYVELLPKNVNHSWIERVFGKCG 151
Query: 222 KVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNP 261
V YVS+P++KSTG KGFAFVEF TKE+A KA+E NP
Sbjct: 152 NVVYVSIPRYKSTGDPKGFAFVEFETKEQAEKAIEFLNNP 191
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 46/69 (66%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
++F+ D NL KDRF + +++S + +++S+ + NK+ +LT D + +A++ S ++E
Sbjct: 44 VDFWFGDVNLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARAVKSSSVVE 103
Query: 59 VTEDGTKVK 67
+ +GT+++
Sbjct: 104 LDLEGTRIR 112
>gi|449265844|gb|EMC76974.1| La-related protein 7 [Columba livia]
Length = 585
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 69/160 (43%), Positives = 105/160 (65%), Gaps = 3/160 (1%)
Query: 105 RKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDD 162
R KQ+ I ++F+ D NL KDRF + +++S + +++S+ + NK+ +LT D
Sbjct: 29 RVKQVLADIAKQVDFWFGDVNLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKL 88
Query: 163 VVKALRKSKLLEVTEDGTKVRRTVVVQDKP-DVDECTIYVEKLPPEAEHDYIESVFSKYG 221
+ +A++ S ++E+ +GT++RR + ++P DVD T+YVE LP H +IE VF K G
Sbjct: 89 IARAVKSSSVVELDLEGTRIRRRQPLGEQPKDVDSRTVYVELLPKNVNHSWIERVFGKCG 148
Query: 222 KVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNP 261
V YVS+P++KSTG KGFAFVEF TKE+A KA+E NP
Sbjct: 149 NVVYVSIPRYKSTGNPKGFAFVEFETKEQAEKAIEFLNNP 188
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 46/69 (66%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
++F+ D NL KDRF + +++S + +++S+ + NK+ +LT D + +A++ S ++E
Sbjct: 41 VDFWFGDVNLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARAVKSSSVVE 100
Query: 59 VTEDGTKVK 67
+ +GT+++
Sbjct: 101 LDLEGTRIR 109
>gi|387914200|gb|AFK10709.1| La protein-like protein [Callorhinchus milii]
Length = 196
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 71/160 (44%), Positives = 106/160 (66%), Gaps = 3/160 (1%)
Query: 105 RKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDD 162
R ++ +I +EF+ D NL KDRF + LQ+S + I++SV NK+ +LT D
Sbjct: 22 RVNKVLSEIKKQVEFWFGDVNLHKDRFLQEQLQKSRDGYIDLSVLTSFNKMKKLTTDVKL 81
Query: 163 VVKALRKSKLLEVTEDGTKVRRTVVVQDKP-DVDECTIYVEKLPPEAEHDYIESVFSKYG 221
+ +AL+ S+++E+ +GTK+RR + D+P DV+E T+YVE LP H +I+ VFSK G
Sbjct: 82 MARALKNSEVIELNVEGTKIRRRQALGDRPQDVEERTVYVELLPKNVSHGWIDRVFSKCG 141
Query: 222 KVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNP 261
V YVS+P++K++G KGFAFVEF T +A KA+E+ NP
Sbjct: 142 NVVYVSIPRYKTSGDPKGFAFVEFETITQAQKAIEVLNNP 181
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 46/69 (66%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
+EF+ D NL KDRF + LQ+S + I++SV NK+ +LT D + +AL+ S+++E
Sbjct: 34 VEFWFGDVNLHKDRFLQEQLQKSRDGYIDLSVLTSFNKMKKLTTDVKLMARALKNSEVIE 93
Query: 59 VTEDGTKVK 67
+ +GTK++
Sbjct: 94 LNVEGTKIR 102
>gi|348041357|ref|NP_001037755.2| la-related protein 7 [Rattus norvegicus]
gi|134034153|sp|Q5XI01.2|LARP7_RAT RecName: Full=La-related protein 7; AltName: Full=La
ribonucleoprotein domain family member 7
Length = 571
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 68/158 (43%), Positives = 105/158 (66%), Gaps = 3/158 (1%)
Query: 107 KQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVV 164
KQ+ I ++F+ D+NL KDRF + +++S + +++S+ + NK+ +LT D +
Sbjct: 27 KQVLADIAKQVDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIA 86
Query: 165 KALRKSKLLEVTEDGTKVRRTVVVQDKP-DVDECTIYVEKLPPEAEHDYIESVFSKYGKV 223
+AL+ S ++E+ +GT++RR + ++P D +E T+YVE LP H +IE VF K G V
Sbjct: 87 RALKSSSVVELDLEGTRIRRKKPLGERPKDEEERTVYVELLPKNVTHSWIERVFGKCGNV 146
Query: 224 TYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNP 261
Y+S+P +KSTG KGFAFVEF TKE+AAKA+E NP
Sbjct: 147 VYISIPHYKSTGDPKGFAFVEFETKEQAAKAIEFLNNP 184
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 47/69 (68%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
++F+ D+NL KDRF + +++S + +++S+ + NK+ +LT D + +AL+ S ++E
Sbjct: 37 VDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALKSSSVVE 96
Query: 59 VTEDGTKVK 67
+ +GT+++
Sbjct: 97 LDLEGTRIR 105
>gi|344254584|gb|EGW10688.1| La-related protein 7 [Cricetulus griseus]
Length = 217
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 68/158 (43%), Positives = 105/158 (66%), Gaps = 3/158 (1%)
Query: 107 KQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVV 164
KQ+ I ++F+ D+NL KDRF + +++S + +++S+ + NK+ +LT D +
Sbjct: 27 KQVLADIAKQVDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIA 86
Query: 165 KALRKSKLLEVTEDGTKVRRTVVVQDKP-DVDECTIYVEKLPPEAEHDYIESVFSKYGKV 223
+AL+ S ++E+ +GT++RR + ++P D +E T+YVE LP H +IE VF K G V
Sbjct: 87 RALKSSSVVELDLEGTRIRRKKPLGERPKDEEERTVYVELLPKNVTHSWIERVFGKCGNV 146
Query: 224 TYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNP 261
Y+S+P +KSTG KGFAFVEF TKE+AAKA+E NP
Sbjct: 147 VYISIPHYKSTGDPKGFAFVEFETKEQAAKAIEFLNNP 184
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 47/69 (68%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
++F+ D+NL KDRF + +++S + +++S+ + NK+ +LT D + +AL+ S ++E
Sbjct: 37 VDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALKSSSVVE 96
Query: 59 VTEDGTKVK 67
+ +GT+++
Sbjct: 97 LDLEGTRIR 105
>gi|110665742|ref|NP_613059.2| la-related protein 7 [Mus musculus]
gi|134034152|sp|Q05CL8.2|LARP7_MOUSE RecName: Full=La-related protein 7; AltName: Full=La
ribonucleoprotein domain family member 7
gi|151555613|gb|AAI48405.1| La ribonucleoprotein domain family, member 7 [synthetic construct]
gi|157170500|gb|AAI53030.1| La ribonucleoprotein domain family, member 7 [synthetic construct]
Length = 570
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/158 (42%), Positives = 105/158 (66%), Gaps = 3/158 (1%)
Query: 107 KQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVV 164
KQ+ I ++F+ D+NL KD+F + +++S + +++S+ + NK+ +LT D +
Sbjct: 26 KQVLADIAKQVDFWFGDANLHKDKFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIA 85
Query: 165 KALRKSKLLEVTEDGTKVRRTVVVQDKP-DVDECTIYVEKLPPEAEHDYIESVFSKYGKV 223
+AL+ S ++E+ +GT++RR + ++P D +E T+YVE LP H +IE VF K G V
Sbjct: 86 RALKSSSVVELDLEGTRIRRKKPLGERPKDEEERTVYVELLPKNVTHSWIERVFGKCGNV 145
Query: 224 TYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNP 261
Y+S+P +KSTG KGFAFVEF TKE+AAKA+E NP
Sbjct: 146 VYISIPHYKSTGDPKGFAFVEFETKEQAAKAIEFLNNP 183
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 47/69 (68%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
++F+ D+NL KD+F + +++S + +++S+ + NK+ +LT D + +AL+ S ++E
Sbjct: 36 VDFWFGDANLHKDKFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALKSSSVVE 95
Query: 59 VTEDGTKVK 67
+ +GT+++
Sbjct: 96 LDLEGTRIR 104
>gi|12849735|dbj|BAB28459.1| unnamed protein product [Mus musculus]
Length = 214
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/158 (42%), Positives = 105/158 (66%), Gaps = 3/158 (1%)
Query: 107 KQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVV 164
KQ+ I ++F+ D+NL KD+F + +++S + +++S+ + NK+ +LT D +
Sbjct: 26 KQVLADIAKQVDFWFGDANLHKDKFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIA 85
Query: 165 KALRKSKLLEVTEDGTKVRRTVVVQDKP-DVDECTIYVEKLPPEAEHDYIESVFSKYGKV 223
+AL+ S ++E+ +GT++RR + ++P D +E T+YVE LP H +IE VF K G V
Sbjct: 86 RALKSSSVVELDLEGTRIRRKKPLGERPKDEEERTVYVELLPKNVTHSWIERVFGKCGNV 145
Query: 224 TYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNP 261
Y+S+P +KSTG KGFAFVEF TKE+AAKA+E NP
Sbjct: 146 VYISIPHYKSTGDPKGFAFVEFETKEQAAKAIEFLNNP 183
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 47/69 (68%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
++F+ D+NL KD+F + +++S + +++S+ + NK+ +LT D + +AL+ S ++E
Sbjct: 36 VDFWFGDANLHKDKFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALKSSSVVE 95
Query: 59 VTEDGTKVK 67
+ +GT+++
Sbjct: 96 LDLEGTRIR 104
>gi|116283672|gb|AAH23165.1| Larp7 protein [Mus musculus]
Length = 366
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/158 (42%), Positives = 105/158 (66%), Gaps = 3/158 (1%)
Query: 107 KQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVV 164
KQ+ I ++F+ D+NL KD+F + +++S + +++S+ + NK+ +LT D +
Sbjct: 26 KQVLADIAKQVDFWFGDANLHKDKFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIA 85
Query: 165 KALRKSKLLEVTEDGTKVRRTVVVQDKP-DVDECTIYVEKLPPEAEHDYIESVFSKYGKV 223
+AL+ S ++E+ +GT++RR + ++P D +E T+YVE LP H +IE VF K G V
Sbjct: 86 RALKSSSVVELDLEGTRIRRKKPLGERPKDEEERTVYVELLPKNVTHSWIERVFGKCGNV 145
Query: 224 TYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNP 261
Y+S+P +KSTG KGFAFVEF TKE+AAKA+E NP
Sbjct: 146 VYISIPHYKSTGDPKGFAFVEFETKEQAAKAIEFLNNP 183
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 47/69 (68%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
++F+ D+NL KD+F + +++S + +++S+ + NK+ +LT D + +AL+ S ++E
Sbjct: 36 VDFWFGDANLHKDKFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALKSSSVVE 95
Query: 59 VTEDGTKVK 67
+ +GT+++
Sbjct: 96 LDLEGTRIR 104
>gi|74187629|dbj|BAE36753.1| unnamed protein product [Mus musculus]
Length = 305
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/158 (42%), Positives = 105/158 (66%), Gaps = 3/158 (1%)
Query: 107 KQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVV 164
KQ+ I ++F+ D+NL KD+F + +++S + +++S+ + NK+ +LT D +
Sbjct: 26 KQVLADIAKQVDFWFGDANLHKDKFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIA 85
Query: 165 KALRKSKLLEVTEDGTKVRRTVVVQDKP-DVDECTIYVEKLPPEAEHDYIESVFSKYGKV 223
+AL+ S ++E+ +GT++RR + ++P D +E T+YVE LP H +IE VF K G V
Sbjct: 86 RALKSSSVVELDLEGTRIRRKKPLGERPKDEEERTVYVELLPKNVTHSWIERVFGKCGNV 145
Query: 224 TYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNP 261
Y+S+P +KSTG KGFAFVEF TKE+AAKA+E NP
Sbjct: 146 VYISIPHYKSTGDPKGFAFVEFETKEQAAKAIEFLNNP 183
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 47/69 (68%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
++F+ D+NL KD+F + +++S + +++S+ + NK+ +LT D + +AL+ S ++E
Sbjct: 36 VDFWFGDANLHKDKFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALKSSSVVE 95
Query: 59 VTEDGTKVK 67
+ +GT+++
Sbjct: 96 LDLEGTRIR 104
>gi|12853228|dbj|BAB29687.1| unnamed protein product [Mus musculus]
Length = 342
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/158 (42%), Positives = 105/158 (66%), Gaps = 3/158 (1%)
Query: 107 KQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVV 164
KQ+ I ++F+ D+NL KD+F + +++S + +++S+ + NK+ +LT D +
Sbjct: 26 KQVLADIAKQVDFWFGDANLHKDKFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIA 85
Query: 165 KALRKSKLLEVTEDGTKVRRTVVVQDKP-DVDECTIYVEKLPPEAEHDYIESVFSKYGKV 223
+AL+ S ++E+ +GT++RR + ++P D +E T+YVE LP H +IE VF K G V
Sbjct: 86 RALKSSSVVELDLEGTRIRRKKPLGERPKDEEERTVYVELLPKNVTHSWIERVFGKCGNV 145
Query: 224 TYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNP 261
Y+S+P +KSTG KGFAFVEF TKE+AAKA+E NP
Sbjct: 146 VYISIPHYKSTGDPKGFAFVEFETKEQAAKAIEFLNNP 183
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 47/69 (68%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
++F+ D+NL KD+F + +++S + +++S+ + NK+ +LT D + +AL+ S ++E
Sbjct: 36 VDFWFGDANLHKDKFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALKSSSVVE 95
Query: 59 VTEDGTKVK 67
+ +GT+++
Sbjct: 96 LDLEGTRIR 104
>gi|449499453|ref|XP_002196501.2| PREDICTED: la-related protein 7-like [Taeniopygia guttata]
Length = 590
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 68/160 (42%), Positives = 104/160 (65%), Gaps = 3/160 (1%)
Query: 105 RKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDD 162
R KQ+ I ++F+ D NL KDRF + +++S + +++S+ + NK+ +LT D
Sbjct: 32 RVKQVLADIAKQVDFWFGDVNLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKL 91
Query: 163 VVKALRKSKLLEVTEDGTKVRRTVVVQDKP-DVDECTIYVEKLPPEAEHDYIESVFSKYG 221
+ +A++ S ++E+ +GT++RR + + P DVD T+YVE LP H +IE VF K G
Sbjct: 92 IARAVKSSSVVELDLEGTRIRRRQPLGECPKDVDSRTVYVELLPKNVNHSWIERVFGKCG 151
Query: 222 KVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNP 261
V YVS+P+++STG KGFAFVEF TKE+A KA+E NP
Sbjct: 152 NVVYVSIPRYRSTGDPKGFAFVEFETKEQAEKAIEFLNNP 191
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 46/69 (66%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
++F+ D NL KDRF + +++S + +++S+ + NK+ +LT D + +A++ S ++E
Sbjct: 44 VDFWFGDVNLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARAVKSSSVVE 103
Query: 59 VTEDGTKVK 67
+ +GT+++
Sbjct: 104 LDLEGTRIR 112
>gi|327274210|ref|XP_003221871.1| PREDICTED: la-related protein 7-like [Anolis carolinensis]
Length = 591
Score = 130 bits (326), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 75/190 (39%), Positives = 120/190 (63%), Gaps = 6/190 (3%)
Query: 78 ISMETEASDN--VDKDLSD-LQRKDGGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQ 134
+ METEA N V+K+ ++ + ++ R R KQ+ I ++F+ D NL KDRF +
Sbjct: 2 MEMETEAVRNKGVEKETTEQKKEREKKKRSRVKQVLSDIAKQVDFWFGDVNLHKDRFLRE 61
Query: 135 LLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEVTEDGTKVRRTVVVQDKP 192
+++S + +++S+ + NK+ +LT D + +A++ S ++E+ +G ++RR + ++P
Sbjct: 62 QIEKSRDGYVDISLLVSFNKMKKLTTDRKLIARAVKSSSVVELDLEGIRIRRRQPLGEEP 121
Query: 193 -DVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEA 251
DVD T+YVE LP H +IE VF K G V YVS+P++K+T KGFAFVEF TKE+A
Sbjct: 122 KDVDSRTVYVELLPKNVNHSWIERVFGKCGNVVYVSIPRYKTTADPKGFAFVEFETKEQA 181
Query: 252 AKALELGLNP 261
KA+E NP
Sbjct: 182 EKAIEFLNNP 191
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 45/69 (65%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
++F+ D NL KDRF + +++S + +++S+ + NK+ +LT D + +A++ S ++E
Sbjct: 44 VDFWFGDVNLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDRKLIARAVKSSSVVE 103
Query: 59 VTEDGTKVK 67
+ +G +++
Sbjct: 104 LDLEGIRIR 112
>gi|47213526|emb|CAF96679.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1719
Score = 128 bits (322), Expect = 3e-27, Method: Composition-based stats.
Identities = 75/191 (39%), Positives = 107/191 (56%), Gaps = 29/191 (15%)
Query: 103 RHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDP 160
R R KQL + +EF+ D NL KDRF ++++ES + +++SV N++ +LT D
Sbjct: 1138 RSRVKQLLADVKKQVEFWFGDVNLHKDRFLRKVMEESEDGYVDISVLTSFNRMKKLTADA 1197
Query: 161 DDVVKALRKSKLLEVTEDGTKVRRTVVVQDKP-DVDECTIYV------------------ 201
V +ALR S ++EV +G KVRR + + P DVD+ T+YV
Sbjct: 1198 RLVARALRNSPVVEVNLEGNKVRRRHPIGEAPADVDDRTVYVVSGREPPPQAPAEQVGLS 1257
Query: 202 -------EKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKA 254
E LP + H +IE VFS+ G V YVS+P++KS+G KGFAFVEF EEA +A
Sbjct: 1258 AVFIRPQELLPKDVTHGWIERVFSQCGTVVYVSVPRYKSSGDSKGFAFVEFEKAEEAREA 1317
Query: 255 LELGLNPCPPD 265
++ LN P D
Sbjct: 1318 IQ-ALNNPPQD 1327
Score = 57.4 bits (137), Expect = 8e-06, Method: Composition-based stats.
Identities = 27/69 (39%), Positives = 45/69 (65%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
+EF+ D NL KDRF ++++ES + +++SV N++ +LT D V +ALR S ++E
Sbjct: 1152 VEFWFGDVNLHKDRFLRKVMEESEDGYVDISVLTSFNRMKKLTADARLVARALRNSPVVE 1211
Query: 59 VTEDGTKVK 67
V +G KV+
Sbjct: 1212 VNLEGNKVR 1220
>gi|170040084|ref|XP_001847842.1| multi-sex-combs [Culex quinquefasciatus]
gi|167863654|gb|EDS27037.1| multi-sex-combs [Culex quinquefasciatus]
Length = 546
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 64/149 (42%), Positives = 92/149 (61%), Gaps = 20/149 (13%)
Query: 110 YQQIMNLMEFYLSDSNLRKDRFFSQLLQESP--------------------EIEVSVFLK 149
Y I MEFY SD+NL KDR+ SQ ++E P + ++ FLK
Sbjct: 40 YNAIRQQMEFYFSDANLAKDRYLSQCIKEDPCENLLLNLHIPDAFIFLTGANLAIAEFLK 99
Query: 150 CNKLARLTHDPDDVVKALRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAE 209
N++ LT +D+ AL+ S+LLE++ED TKV R Q++ + ++CTIYVE LPP+A+
Sbjct: 100 FNRIKTLTDSVEDIAVALKNSELLELSEDRTKVHRVTEFQERVNCEDCTIYVESLPPKAD 159
Query: 210 HDYIESVFSKYGKVTYVSLPKFKSTGKLK 238
H+++ +VFS YGKV YVSLP FK + K+K
Sbjct: 160 HEWVRNVFSAYGKVVYVSLPTFKYSKKIK 188
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 48/86 (55%), Gaps = 20/86 (23%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESP--------------------EIEVSVFLKCNKLARL 40
MEFY SD+NL KDR+ SQ ++E P + ++ FLK N++ L
Sbjct: 47 MEFYFSDANLAKDRYLSQCIKEDPCENLLLNLHIPDAFIFLTGANLAIAEFLKFNRIKTL 106
Query: 41 THDPDDVVKALRKSKLLEVTEDGTKV 66
T +D+ AL+ S+LLE++ED TKV
Sbjct: 107 TDSVEDIAVALKNSELLELSEDRTKV 132
>gi|312376823|gb|EFR23805.1| hypothetical protein AND_12216 [Anopheles darlingi]
Length = 590
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/146 (47%), Positives = 100/146 (68%)
Query: 110 YQQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRK 169
+ I + MEFY SD+NL KDR+ S LL+E P I + FLK NK+ L + +++ AL+
Sbjct: 30 FNAIRSQMEFYFSDANLSKDRYMSVLLREDPFIPLQEFLKFNKIKALASNVEEIATALKN 89
Query: 170 SKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLP 229
S LL +++D KVRRT ++ + ++CT+YVE LPP+A+ D++ +VFS YGKV YVSLP
Sbjct: 90 SDLLTLSDDNQKVRRTKEFVERENSEDCTLYVESLPPKADLDWVRNVFSSYGKVAYVSLP 149
Query: 230 KFKSTGKLKGFAFVEFSTKEEAAKAL 255
+FK + K+K F FVEF + +KAL
Sbjct: 150 RFKFSKKIKEFGFVEFEEEASVSKAL 175
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 45/67 (67%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEVT 60
MEFY SD+NL KDR+ S LL+E P I + FLK NK+ L + +++ AL+ S LL ++
Sbjct: 37 MEFYFSDANLSKDRYMSVLLREDPFIPLQEFLKFNKIKALASNVEEIATALKNSDLLTLS 96
Query: 61 EDGTKVK 67
+D KV+
Sbjct: 97 DDNQKVR 103
>gi|196001131|ref|XP_002110433.1| hypothetical protein TRIADDRAFT_54426 [Trichoplax adhaerens]
gi|190586384|gb|EDV26437.1| hypothetical protein TRIADDRAFT_54426 [Trichoplax adhaerens]
Length = 482
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/139 (43%), Positives = 92/139 (66%), Gaps = 2/139 (1%)
Query: 118 EFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEV 175
EFY SD+NL+KD+F +++ E ++V++F K NK+ LT + V+KA++ LE+
Sbjct: 44 EFYFSDANLQKDKFLRKMIDEDENGYVDVAIFKKFNKVKALTDNFSLVIKAIKMLDGLEM 103
Query: 176 TEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTG 235
+EDG ++RR + +DE TIYVE +P +H+++ F K+G++ YVS+PK+KSTG
Sbjct: 104 SEDGERIRRRTTIPAAECIDERTIYVEVIPKRVDHEWVRKHFDKFGEILYVSIPKYKSTG 163
Query: 236 KLKGFAFVEFSTKEEAAKA 254
KGFAFVE+ E A KA
Sbjct: 164 DNKGFAFVEYKDPENAQKA 182
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 50/80 (62%), Gaps = 6/80 (7%)
Query: 2 EFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEV 59
EFY SD+NL+KD+F +++ E ++V++F K NK+ LT + V+KA++ LE+
Sbjct: 44 EFYFSDANLQKDKFLRKMIDEDENGYVDVAIFKKFNKVKALTDNFSLVIKAIKMLDGLEM 103
Query: 60 TEDGTKVKGNIIRHFLVPIS 79
+EDG +++ R +P +
Sbjct: 104 SEDGERIR----RRTTIPAA 119
>gi|326431875|gb|EGD77445.1| hypothetical protein PTSG_08541 [Salpingoeca sp. ATCC 50818]
Length = 761
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 61/142 (42%), Positives = 92/142 (64%), Gaps = 3/142 (2%)
Query: 113 IMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKS 170
++ ++FY SD+NLR+DRF ++ P+ + +FLK NK+ +T DV+ A+
Sbjct: 69 LIEPLKFYFSDANLRRDRFIRDYIKNDPDNYFPIKLFLKFNKVKSVTSRIQDVMHAIEHI 128
Query: 171 KLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPK 230
LE++ D +VRR V + DVD CTIYVEKLP EHD I ++FS++G + Y+SLP+
Sbjct: 129 DTLELSPDRQRVRRKDPVIKEKDVDACTIYVEKLPEAFEHDDINALFSRFGTIEYISLPR 188
Query: 231 FKSTGKLKGFAFVEFSTKEEAA 252
+ + K KGFAF+EF+T EA+
Sbjct: 189 WPNR-KHKGFAFIEFATPLEAS 209
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
++FY SD+NLR+DRF ++ P+ + +FLK NK+ +T DV+ A+ LE
Sbjct: 73 LKFYFSDANLRRDRFIRDYIKNDPDNYFPIKLFLKFNKVKSVTSRIQDVMHAIEHIDTLE 132
Query: 59 VTEDGTKVK 67
++ D +V+
Sbjct: 133 LSPDRQRVR 141
>gi|297293252|ref|XP_001092044.2| PREDICTED: la-related protein 7 [Macaca mulatta]
Length = 549
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 58/121 (47%), Positives = 83/121 (68%), Gaps = 1/121 (0%)
Query: 142 IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEVTEDGTKVRRTVVVQDKP-DVDECTIY 200
+++S+ + NK+ +LT D + +ALR S ++E+ +GT++RR + ++P D DE T+Y
Sbjct: 36 VDISLLVSFNKMKKLTTDGKLIARALRSSAVVELDLEGTRIRRKKPLGERPKDEDERTVY 95
Query: 201 VEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLN 260
VE LP H +IE VF K G V Y+S+P +KSTG KGFAFVEF TKE+AAKA+E N
Sbjct: 96 VELLPKNVNHSWIERVFGKCGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIEFLNN 155
Query: 261 P 261
P
Sbjct: 156 P 156
>gi|391337026|ref|XP_003742875.1| PREDICTED: la-related protein 7-like [Metaseiulus occidentalis]
Length = 493
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/157 (45%), Positives = 97/157 (61%), Gaps = 12/157 (7%)
Query: 109 LYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTH----DPDD 162
L Q I +EFY D+NLRKDR+ +L+ E ++V FLK NK+ L D +
Sbjct: 68 LRQDISKQLEFYFCDANLRKDRYMKELVAAGQEGWVKVEEFLKFNKIKLLLEKKGIDVTE 127
Query: 163 VVKALRKSKLLEVTEDGTKVRRT-----VVVQDKPDVDECTIYVEKLPPEAEHDYIESVF 217
V +A + S+LLEV+ED T+VRR VV +D+ VD+CTIYV+ L + I S+F
Sbjct: 128 VARAAKDSQLLEVSEDLTRVRRNLEKFPVVEKDQALVDDCTIYVQGLQQSMTIESIRSLF 187
Query: 218 SKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKA 254
S++G V YVSLP+ +STG KGFAFVEF+ K A A
Sbjct: 188 SEFGMVEYVSLPR-RSTGDHKGFAFVEFAEKTGAENA 223
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 48/76 (63%), Gaps = 6/76 (7%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTH----DPDDVVKALRKS 54
+EFY D+NLRKDR+ +L+ E ++V FLK NK+ L D +V +A + S
Sbjct: 76 LEFYFCDANLRKDRYMKELVAAGQEGWVKVEEFLKFNKIKLLLEKKGIDVTEVARAAKDS 135
Query: 55 KLLEVTEDGTKVKGNI 70
+LLEV+ED T+V+ N+
Sbjct: 136 QLLEVSEDLTRVRRNL 151
>gi|403345740|gb|EJY72251.1| La-related protein 7 [Oxytricha trifallax]
Length = 489
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/223 (34%), Positives = 123/223 (55%), Gaps = 30/223 (13%)
Query: 68 GNIIRHFLVPISMETEASDNVDKDLSDLQRKDGGGRHRKKQLYQQIMNLMEFYLSDSNLR 127
N IR PI + N D+ + L++ D RHR L + + +EFYL +SNL
Sbjct: 82 SNFIRE--DPIKKPNKFKQNQDQTM--LEQSDEALRHRS--LLKSLRFQLEFYLGNSNLM 135
Query: 128 KDRFFSQLLQESPEIEVSVFLKCNKLARLTHD-------PDDVVKALRK----SKLLEVT 176
KD F + LQ+ P +E+S+FL N++ ++ D + +KAL++ SK+L+++
Sbjct: 136 KDNFLYEKLQKDPNLEISLFLTFNRVKKIFGDSYMSNESSEAQIKALQESLKFSKMLKLS 195
Query: 177 EDGTKVRRTVVVQ----DKPDVDECTIYVEKLPPEA-EHDYIESVFSKYGKVTYVSLPKF 231
+DG KV+R + + D +D+C IYVEK P +A + + + +F + GK+ V +P++
Sbjct: 196 KDGLKVKRRIPFKKNQVDVKAIDQCMIYVEKFPVKAMDIEKMTFIFKRAGKIINVQMPRY 255
Query: 232 KSTGKLKGFAFVEFSTKEEAAKALELG--------LNPCPPDY 266
+G KGFAFVE+S+ EEA A+E+ NP P Y
Sbjct: 256 PKSGLPKGFAFVEYSSPEEAQHAVEMFNNKIVEELTNPNHPHY 298
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 51/81 (62%), Gaps = 11/81 (13%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHD-------PDDVVKALRK 53
+EFYL +SNL KD F + LQ+ P +E+S+FL N++ ++ D + +KAL++
Sbjct: 125 LEFYLGNSNLMKDNFLYEKLQKDPNLEISLFLTFNRVKKIFGDSYMSNESSEAQIKALQE 184
Query: 54 ----SKLLEVTEDGTKVKGNI 70
SK+L++++DG KVK I
Sbjct: 185 SLKFSKMLKLSKDGLKVKRRI 205
>gi|403366460|gb|EJY83033.1| La-related protein 7 [Oxytricha trifallax]
Length = 500
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 69/202 (34%), Positives = 117/202 (57%), Gaps = 26/202 (12%)
Query: 89 DKDLSDLQRKDGGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFL 148
++D S L++ D RHR L + + +EFYL +SNL KD F + LQ+ P ++V++FL
Sbjct: 99 NQDQSMLEQTDEALRHRS--LLKSLRFQLEFYLGNSNLMKDNFLYEKLQKDPNLDVALFL 156
Query: 149 KCNKLARLTHD-------PDDVVKALRK----SKLLEVTEDGTKVRRTVVVQ----DKPD 193
N++ ++ D + ++AL++ SK+L++++DG KV+R + + D
Sbjct: 157 TFNRVKKIFGDSYMSNESAEAQIQALQESLKFSKMLKLSKDGLKVKRRIPFKKNQVDVKA 216
Query: 194 VDECTIYVEKLPPEA-EHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAA 252
+D+C IYVEK P +A + + + +F + GK+ V +P++ +G KGFAFVE+S+ EEA
Sbjct: 217 IDQCMIYVEKFPVKAMDIEKMTFIFKRAGKIINVQMPRYPKSGLPKGFAFVEYSSPEEAQ 276
Query: 253 KALELG--------LNPCPPDY 266
A+E+ NP P Y
Sbjct: 277 HAVEMFNNKIVEELTNPNHPHY 298
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 51/81 (62%), Gaps = 11/81 (13%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHD-------PDDVVKALRK 53
+EFYL +SNL KD F + LQ+ P ++V++FL N++ ++ D + ++AL++
Sbjct: 125 LEFYLGNSNLMKDNFLYEKLQKDPNLDVALFLTFNRVKKIFGDSYMSNESAEAQIQALQE 184
Query: 54 ----SKLLEVTEDGTKVKGNI 70
SK+L++++DG KVK I
Sbjct: 185 SLKFSKMLKLSKDGLKVKRRI 205
>gi|403333763|gb|EJY66002.1| La-related protein 7 [Oxytricha trifallax]
Length = 500
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 69/202 (34%), Positives = 117/202 (57%), Gaps = 26/202 (12%)
Query: 89 DKDLSDLQRKDGGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFL 148
++D S L++ D RHR L + + +EFYL +SNL KD F + LQ+ P ++V++FL
Sbjct: 99 NQDQSMLEQTDEALRHRS--LLKSLRFQLEFYLGNSNLMKDNFLYEKLQKDPNLDVALFL 156
Query: 149 KCNKLARLTHD-------PDDVVKALRK----SKLLEVTEDGTKVRRTVVVQ----DKPD 193
N++ ++ D + ++AL++ SK+L++++DG KV+R + + D
Sbjct: 157 TFNRVKKIFGDSYMSNESAEAQIQALQESLKFSKMLKLSKDGLKVKRRIPFKKNQVDVKA 216
Query: 194 VDECTIYVEKLPPEA-EHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAA 252
+D+C IYVEK P +A + + + +F + GK+ V +P++ +G KGFAFVE+S+ EEA
Sbjct: 217 IDQCMIYVEKFPVKAMDIEKMTFIFKRAGKIINVQMPRYPKSGLPKGFAFVEYSSPEEAQ 276
Query: 253 KALELG--------LNPCPPDY 266
A+E+ NP P Y
Sbjct: 277 HAVEMFNNKIVEELTNPNHPHY 298
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 51/81 (62%), Gaps = 11/81 (13%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHD-------PDDVVKALRK 53
+EFYL +SNL KD F + LQ+ P ++V++FL N++ ++ D + ++AL++
Sbjct: 125 LEFYLGNSNLMKDNFLYEKLQKDPNLDVALFLTFNRVKKIFGDSYMSNESAEAQIQALQE 184
Query: 54 ----SKLLEVTEDGTKVKGNI 70
SK+L++++DG KVK I
Sbjct: 185 SLKFSKMLKLSKDGLKVKRRI 205
>gi|426345273|ref|XP_004040345.1| PREDICTED: la-related protein 7 isoform 4 [Gorilla gorilla gorilla]
Length = 503
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/110 (50%), Positives = 75/110 (68%), Gaps = 1/110 (0%)
Query: 153 LARLTHDPDDVVKALRKSKLLEVTEDGTKVRRTVVVQDKP-DVDECTIYVEKLPPEAEHD 211
+ +LT D + +ALR S ++E+ +GT++RR + ++P D DE T+YVE LP H
Sbjct: 1 MKKLTTDGKLIARALRSSAVVELDLEGTRIRRKKPLGERPKDEDERTVYVELLPKNVNHS 60
Query: 212 YIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNP 261
+IE VF K G V Y+S+P +KSTG KGFAFVEF TKE+AAKA+E NP
Sbjct: 61 WIERVFGKCGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIEFLNNP 110
>gi|426345277|ref|XP_004040347.1| PREDICTED: la-related protein 7-like [Gorilla gorilla gorilla]
Length = 498
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/110 (50%), Positives = 75/110 (68%), Gaps = 1/110 (0%)
Query: 153 LARLTHDPDDVVKALRKSKLLEVTEDGTKVRRTVVVQDKP-DVDECTIYVEKLPPEAEHD 211
+ +LT D + +ALR S ++E+ +GT++RR + ++P D DE T+YVE LP H
Sbjct: 1 MKKLTTDGKLIARALRSSAVVELDLEGTRIRRKKPLGERPKDEDERTVYVELLPKNVNHS 60
Query: 212 YIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNP 261
+IE VF K G V Y+S+P +KSTG KGFAFVEF TKE+AAKA+E NP
Sbjct: 61 WIERVFGKCGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIEFLNNP 110
>gi|410038620|ref|XP_003950445.1| PREDICTED: la-related protein 7 [Pan troglodytes]
Length = 503
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/110 (50%), Positives = 75/110 (68%), Gaps = 1/110 (0%)
Query: 153 LARLTHDPDDVVKALRKSKLLEVTEDGTKVRRTVVVQDKP-DVDECTIYVEKLPPEAEHD 211
+ +LT D + +ALR S ++E+ +GT++RR + ++P D DE T+YVE LP H
Sbjct: 1 MKKLTTDGKLIARALRSSAVVELDLEGTRIRRKKPLGERPKDEDERTVYVELLPKNVNHS 60
Query: 212 YIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNP 261
+IE VF K G V Y+S+P +KSTG KGFAFVEF TKE+AAKA+E NP
Sbjct: 61 WIERVFGKCGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIEFLNNP 110
>gi|198438463|ref|XP_002129865.1| PREDICTED: similar to La ribonucleoprotein domain family, member 7
[Ciona intestinalis]
Length = 508
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 92/155 (59%), Gaps = 4/155 (2%)
Query: 103 RHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLL--QESPEIEVSVFLKCNKLARLTHDP 160
R R K Q + +EFY SD+NLR+D+FF Q + + + V N + +L+ +
Sbjct: 15 RKRIKHTLQTVQEQVEFYFSDANLRRDKFFLQKTGSNGTKPVPIHVLKSFNCIKKLSVNE 74
Query: 161 DDVVKALRKSKLLEVTEDGTKVRRTVVVQDKP-DVDECTIYVEKLPPEAEHDYIESVFSK 219
+++A++ S LL V E ++R V+Q++P + D+CT+Y++ LPP+A +++ + K
Sbjct: 75 QTIIRAIKNSTLLTVNEHLKTIQRKFVLQEEPANTDDCTVYIDCLPPDATIAWLKGICKK 134
Query: 220 YGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKA 254
G Y+SLP+ + G +KGF F+EFS EEA A
Sbjct: 135 LGTAKYISLPR-QQNGSIKGFCFIEFSCPEEALTA 168
Score = 41.2 bits (95), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 1 MEFYLSDSNLRKDRFFSQLL--QESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
+EFY SD+NLR+D+FF Q + + + V N + +L+ + +++A++ S LL
Sbjct: 29 VEFYFSDANLRRDKFFLQKTGSNGTKPVPIHVLKSFNCIKKLSVNEQTIIRAIKNSTLLT 88
Query: 59 VTE 61
V E
Sbjct: 89 VNE 91
>gi|148680318|gb|EDL12265.1| La ribonucleoprotein domain family, member 7, isoform CRA_a [Mus
musculus]
Length = 499
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 76/111 (68%), Gaps = 1/111 (0%)
Query: 152 KLARLTHDPDDVVKALRKSKLLEVTEDGTKVRRTVVVQDKP-DVDECTIYVEKLPPEAEH 210
K+ +LT D + +AL+ S ++E+ +GT++RR + ++P D +E T+YVE LP H
Sbjct: 1 KMKKLTTDGKLIARALKSSSVVELDLEGTRIRRKKPLGERPKDEEERTVYVELLPKNVTH 60
Query: 211 DYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNP 261
+IE VF K G V Y+S+P +KSTG KGFAFVEF TKE+AAKA+E NP
Sbjct: 61 SWIERVFGKCGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIEFLNNP 111
>gi|321445150|gb|EFX60609.1| hypothetical protein DAPPUDRAFT_342412 [Daphnia pulex]
Length = 260
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/105 (53%), Positives = 72/105 (68%), Gaps = 2/105 (1%)
Query: 153 LARLTHDPDDVVKALRKSKLLEVTEDGTKVRRTVVVQDKP--DVDECTIYVEKLPPEAEH 210
L LT D ++ KAL+ SK L+++ED TKV R K +VD CT+YVE+LPP A
Sbjct: 1 LRALTEDLKEIAKALKFSKTLKLSEDDTKVSRITPFHPKSQEEVDLCTVYVERLPPHASI 60
Query: 211 DYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKAL 255
++I S+FS+YG V YVSLPKFK ++KGFAFVEF E AAKA+
Sbjct: 61 EWITSIFSEYGVVAYVSLPKFKDVTRIKGFAFVEFCDPESAAKAV 105
>gi|53733605|gb|AAH83898.1| La ribonucleoprotein domain family, member 7 [Rattus norvegicus]
Length = 497
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 75/110 (68%), Gaps = 1/110 (0%)
Query: 153 LARLTHDPDDVVKALRKSKLLEVTEDGTKVRRTVVVQDKP-DVDECTIYVEKLPPEAEHD 211
+ +LT D + +AL+ S ++E+ +GT++RR + ++P D +E T+YVE LP H
Sbjct: 1 MKKLTTDGKLIARALKSSSVVELDLEGTRIRRKKPLGERPKDEEERTVYVELLPKNVTHS 60
Query: 212 YIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNP 261
+IE VF K G V Y+S+P +KSTG KGFAFVEF TKE+AAKA+E NP
Sbjct: 61 WIERVFGKCGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIEFLNNP 110
>gi|198457333|ref|XP_002136250.1| GA27845 [Drosophila pseudoobscura pseudoobscura]
gi|198142556|gb|EDY71289.1| GA27845 [Drosophila pseudoobscura pseudoobscura]
Length = 510
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 81/142 (57%), Gaps = 16/142 (11%)
Query: 117 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEVT 176
MEFY D+NL KDRF + + + P + + +FL NK+ L D + KAL S+LLE+
Sbjct: 1 MEFYFGDANLTKDRFLRRYVDQDPYVPLEIFLTFNKMKPLAEDVKQIAKALNNSQLLELD 60
Query: 177 EDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGK 236
E KVRR + D+ DV++ T+ ++ VFS+YG V YVSLP + T K
Sbjct: 61 ESALKVRRKTKMPDQRDVNDKTL-------------LKEVFSRYGPVAYVSLPHYPGTKK 107
Query: 237 LKGFAFVEF---STKEEAAKAL 255
+K FAF+EF S E+A KA
Sbjct: 108 IKEFAFIEFERSSALEKAVKAF 129
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 40/67 (59%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEVT 60
MEFY D+NL KDRF + + + P + + +FL NK+ L D + KAL S+LLE+
Sbjct: 1 MEFYFGDANLTKDRFLRRYVDQDPYVPLEIFLTFNKMKPLAEDVKQIAKALNNSQLLELD 60
Query: 61 EDGTKVK 67
E KV+
Sbjct: 61 ESALKVR 67
>gi|198457340|ref|XP_002136252.1| GA27844 [Drosophila pseudoobscura pseudoobscura]
gi|198142558|gb|EDY71291.1| GA27844 [Drosophila pseudoobscura pseudoobscura]
Length = 226
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 81/142 (57%), Gaps = 16/142 (11%)
Query: 117 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEVT 176
MEFY D+NL KDRF + + + P + + +FL NK+ L D + KAL S+LLE+
Sbjct: 1 MEFYFGDANLTKDRFLRRYVDQDPYVPLEIFLTFNKMKPLAEDVKQIAKALNNSQLLELD 60
Query: 177 EDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGK 236
E KVRR + D+ DV++ T+ ++ VFS+YG V YVSLP + T K
Sbjct: 61 ESALKVRRKTKMPDQRDVNDKTL-------------LKEVFSRYGPVAYVSLPHYPGTKK 107
Query: 237 LKGFAFVEF---STKEEAAKAL 255
+K FAF+EF S E+A KA
Sbjct: 108 IKEFAFIEFERSSALEKAVKAF 129
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 40/67 (59%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEVT 60
MEFY D+NL KDRF + + + P + + +FL NK+ L D + KAL S+LLE+
Sbjct: 1 MEFYFGDANLTKDRFLRRYVDQDPYVPLEIFLTFNKMKPLAEDVKQIAKALNNSQLLELD 60
Query: 61 EDGTKVK 67
E KV+
Sbjct: 61 ESALKVR 67
>gi|198457351|ref|XP_002136255.1| GA27853 [Drosophila pseudoobscura pseudoobscura]
gi|198142561|gb|EDY71294.1| GA27853 [Drosophila pseudoobscura pseudoobscura]
Length = 641
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 80/142 (56%), Gaps = 16/142 (11%)
Query: 117 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEVT 176
MEFY D+NL KDRF + + P + + +FL NK+ L D + KAL S+LLE+
Sbjct: 1 MEFYFGDANLTKDRFLRRYVDLDPYVPLEIFLTFNKMKPLAEDVKQIAKALNNSQLLELD 60
Query: 177 EDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGK 236
E KVRR + D+ DV++ T+ ++ VFS+YG V YVSLP + T K
Sbjct: 61 ESALKVRRKTKMPDQRDVNDKTL-------------LKEVFSRYGPVAYVSLPHYPGTKK 107
Query: 237 LKGFAFVEF---STKEEAAKAL 255
+K FAF+EF S E+A KA
Sbjct: 108 IKEFAFIEFERSSALEKAVKAF 129
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 39/67 (58%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEVT 60
MEFY D+NL KDRF + + P + + +FL NK+ L D + KAL S+LLE+
Sbjct: 1 MEFYFGDANLTKDRFLRRYVDLDPYVPLEIFLTFNKMKPLAEDVKQIAKALNNSQLLELD 60
Query: 61 EDGTKVK 67
E KV+
Sbjct: 61 ESALKVR 67
>gi|449662539|ref|XP_002159561.2| PREDICTED: uncharacterized protein LOC100199382 [Hydra
magnipapillata]
Length = 514
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 87/159 (54%), Gaps = 28/159 (17%)
Query: 100 GGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE-IEVSVFLKCNKLARLTH 158
G R R K L +Q N +EFY SD+NLR DRF + + ++ +++ LK NKL LT
Sbjct: 8 GKQRKRLKSLLKQTRNQLEFYFSDANLRHDRFLRKEITDNDGYVDLKTMLKFNKLKTLTS 67
Query: 159 DPDDVVKALRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFS 218
D +VKA+ S L+ E+ P + +HD+++ +FS
Sbjct: 68 DLSVLVKAVEISDSLQ---------------------------EQFPNDIDHDWLKEIFS 100
Query: 219 KYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALEL 257
K G V Y+SLP+ K K+KGFAF+EFST++EA KA ++
Sbjct: 101 KCGTVEYISLPRHKHNNKVKGFAFIEFSTQQEAEKACQM 139
Score = 40.4 bits (93), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE-IEVSVFLKCNKLARLTHDPDDVVKAL 51
+EFY SD+NLR DRF + + ++ +++ LK NKL LT D +VKA+
Sbjct: 25 LEFYFSDANLRHDRFLRKEITDNDGYVDLKTMLKFNKLKTLTSDLSVLVKAV 76
>gi|440797101|gb|ELR18196.1| La domain containing protein [Acanthamoeba castellanii str. Neff]
Length = 322
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 85/138 (61%), Gaps = 4/138 (2%)
Query: 111 QQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALR 168
+++ +EFYLS SNL KD+F ++Q P+ ++V++F ++ +T D + +V+ALR
Sbjct: 7 EKVRKQIEFYLSSSNLMKDKFLRPIVQADPKGYVDVAMFANFPRVQSITRDLELLVRALR 66
Query: 169 KSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSL 228
KS L+V DGT+V+R + D + T+Y E LP +HD + +F ++G V YVSL
Sbjct: 67 KSSTLKVNRDGTRVKRKEPFVEY-DTEANTVYAEHLPEGYDHDVVRGMFEQHGAVNYVSL 125
Query: 229 PKFKSTGKLKGFAFVEFS 246
P+ KGFAF+EF+
Sbjct: 126 PR-NPDKSFKGFAFIEFA 142
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 47/69 (68%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
+EFYLS SNL KD+F ++Q P+ ++V++F ++ +T D + +V+ALRKS L+
Sbjct: 13 IEFYLSSSNLMKDKFLRPIVQADPKGYVDVAMFANFPRVQSITRDLELLVRALRKSSTLK 72
Query: 59 VTEDGTKVK 67
V DGT+VK
Sbjct: 73 VNRDGTRVK 81
>gi|428170641|gb|EKX39564.1| hypothetical protein GUITHDRAFT_114292 [Guillardia theta CCMP2712]
Length = 321
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/145 (42%), Positives = 84/145 (57%), Gaps = 7/145 (4%)
Query: 118 EFYLSDSNLRKDRFFSQLLQES--PEIEVSVFLKCNKLARLTHDPDDVVK-ALRKSKLLE 174
+FY DSNL KDRF + +++ + + V NKL LT ++ ++ A + SK L
Sbjct: 44 QFYFGDSNLLKDRFLKEAIEKDDLGLVPIEVLKTFNKLKVLTDGNEETIRDAAKTSKELR 103
Query: 175 VTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFK-- 232
V+EDG ++ R + D TIYVE + P + H+ I S SK+GKV YVSLP+FK
Sbjct: 104 VSEDGKRIGRLKPLPRLDDTRPRTIYVEGIAPSSTHEEISSFMSKWGKVCYVSLPRFKDQ 163
Query: 233 --STGKLKGFAFVEFSTKEEAAKAL 255
+ GK KGF FVEF EEA KA+
Sbjct: 164 DGNPGKTKGFCFVEFEHVEEAKKAV 188
Score = 40.4 bits (93), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 2 EFYLSDSNLRKDRFFSQLLQES--PEIEVSVFLKCNKLARLTHDPDDVVK-ALRKSKLLE 58
+FY DSNL KDRF + +++ + + V NKL LT ++ ++ A + SK L
Sbjct: 44 QFYFGDSNLLKDRFLKEAIEKDDLGLVPIEVLKTFNKLKVLTDGNEETIRDAAKTSKELR 103
Query: 59 VTEDGTKV 66
V+EDG ++
Sbjct: 104 VSEDGKRI 111
>gi|358253471|dbj|GAA53141.1| La-related protein 7 [Clonorchis sinensis]
Length = 641
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 106/187 (56%), Gaps = 39/187 (20%)
Query: 109 LYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKA 166
L +++M+ +EFYLS+ NL DRFF++ ++ P+ I +++ L+CN+L L + + ++ +
Sbjct: 49 LRKRVMHQVEFYLSEGNLTHDRFFAEQMKNRPDNGIPIAMLLQCNRLQALKINEELLLHS 108
Query: 167 LRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLP-----PEA-EH---------- 210
+RKS L++V+EDG V RT + + ++ TI V +P P+ +H
Sbjct: 109 IRKSSLVKVSEDGLAVVRTRPLAELAPREKRTILVVGIPRWFNDPDTVDHSVQEQVVDGP 168
Query: 211 ---------------------DYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKE 249
D++ +FS+YG+V Y+SLP++ ++G +GFAFVEF+T +
Sbjct: 169 APTVNTASVSTPHIDRGYEMMDWLRDIFSEYGEVLYISLPQYHTSGFFRGFAFVEFATPK 228
Query: 250 EAAKALE 256
+A A++
Sbjct: 229 QARLAVK 235
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 48/68 (70%), Gaps = 2/68 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
+EFYLS+ NL DRFF++ ++ P+ I +++ L+CN+L L + + ++ ++RKS L++
Sbjct: 57 VEFYLSEGNLTHDRFFAEQMKNRPDNGIPIAMLLQCNRLQALKINEELLLHSIRKSSLVK 116
Query: 59 VTEDGTKV 66
V+EDG V
Sbjct: 117 VSEDGLAV 124
>gi|405962787|gb|EKC28430.1| La-related protein 7 [Crassostrea gigas]
Length = 584
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 78/126 (61%), Gaps = 4/126 (3%)
Query: 141 EIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIY 200
++++ FL K++ LT D + KAL S E+ ED TKV+R ++Q+ D+DE T
Sbjct: 33 DVDMETFLTFKKISSLTKDVIQIRKALSHSDFFELNEDKTKVKRKTLIQELKDLDEKT-- 90
Query: 201 VEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKAL-ELGL 259
E LP A+H ++ +FS G +TY+S+PKFKS+G KGFAFVEF + E A +A EL
Sbjct: 91 -ECLPKTADHQWLRKLFSPCGNITYISIPKFKSSGDKKGFAFVEFDSVEAAKRACQELNN 149
Query: 260 NPCPPD 265
P P+
Sbjct: 150 PPVKPE 155
>gi|198457997|ref|XP_002136209.1| GA23201 [Drosophila pseudoobscura pseudoobscura]
gi|198142478|gb|EDY71220.1| GA23201 [Drosophila pseudoobscura pseudoobscura]
Length = 167
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 50/120 (41%), Positives = 72/120 (60%), Gaps = 2/120 (1%)
Query: 88 VDKDLSDLQRKDG--GGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVS 145
D + S+ ++D GGR RK+ LY I + MEFY D+NL KDRF + + + P + +
Sbjct: 36 TDAESSEPAKRDAAAGGRKRKRHLYNSIRSQMEFYFGDANLTKDRFLRRYVDQDPYVPLE 95
Query: 146 VFLKCNKLARLTHDPDDVVKALRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLP 205
+FL NK+ L D + KAL S+LLE+ E KVRR + D+ DV++ T+YVE LP
Sbjct: 96 IFLTFNKMKPLAEDVKQIAKALNNSQLLELDESALKVRRKTKLPDQRDVNDKTLYVEALP 155
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 40/67 (59%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEVT 60
MEFY D+NL KDRF + + + P + + +FL NK+ L D + KAL S+LLE+
Sbjct: 67 MEFYFGDANLTKDRFLRRYVDQDPYVPLEIFLTFNKMKPLAEDVKQIAKALNNSQLLELD 126
Query: 61 EDGTKVK 67
E KV+
Sbjct: 127 ESALKVR 133
>gi|76154703|gb|AAX26134.2| SJCHGC08042 protein [Schistosoma japonicum]
Length = 227
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 99/182 (54%), Gaps = 35/182 (19%)
Query: 110 YQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKAL 167
+ +++ +EFYLS+ NL +DRFF Q +Q+ + I +++ LKCN++ + + D + +
Sbjct: 3 FNKVLRQVEFYLSEGNLNRDRFFKQEMQKRDDNGIPIALLLKCNRMIAMNVNEDILKNVV 62
Query: 168 RKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLP--PE--AEH------------- 210
KSK+L +++DG + R + + D ++ TI V +LP P AE+
Sbjct: 63 EKSKILRLSDDGLAIVRVLPLSDFGPREKRTILVTELPRLPSGMAENVNENDTSQRSAKL 122
Query: 211 ----------------DYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKA 254
D+I ++F +YG+V YVSLP++ + +GFAFVEF T + A KA
Sbjct: 123 CSNQMINISSASCELTDWIRNMFEEYGEVLYVSLPRYHRSNSFRGFAFVEFKTSKSARKA 182
Query: 255 LE 256
++
Sbjct: 183 VK 184
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 45/68 (66%), Gaps = 2/68 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
+EFYLS+ NL +DRFF Q +Q+ + I +++ LKCN++ + + D + + KSK+L
Sbjct: 10 VEFYLSEGNLNRDRFFKQEMQKRDDNGIPIALLLKCNRMIAMNVNEDILKNVVEKSKILR 69
Query: 59 VTEDGTKV 66
+++DG +
Sbjct: 70 LSDDGLAI 77
>gi|226479200|emb|CAX73095.1| La-related protein 7 [Schistosoma japonicum]
Length = 590
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 96/182 (52%), Gaps = 35/182 (19%)
Query: 110 YQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKAL 167
+ +++ +EFYLS+ NL +DRFF Q +Q+ + I +++ LKCN++ + + D + +
Sbjct: 15 FNKVLRQVEFYLSEGNLNRDRFFKQEMQKRDDNGIPIALLLKCNRMIAMNVNEDILKNVV 74
Query: 168 RKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLP---------------------- 205
KSK+L +++DG + R + + D ++ TI V +LP
Sbjct: 75 EKSKILRLSDDGLAIVRVLPLSDFGPREKRTILVTELPRLLSGMTENVNENDTSQRSAKL 134
Query: 206 ----------PEAE-HDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKA 254
E D+I ++F +YG+V YVSLP++ + +GFAFVEF T + A KA
Sbjct: 135 CSNQMMDISSASCELTDWIRNMFDEYGEVLYVSLPRYHRSNSFRGFAFVEFKTSKSARKA 194
Query: 255 LE 256
++
Sbjct: 195 VK 196
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 45/68 (66%), Gaps = 2/68 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
+EFYLS+ NL +DRFF Q +Q+ + I +++ LKCN++ + + D + + KSK+L
Sbjct: 22 VEFYLSEGNLNRDRFFKQEMQKRDDNGIPIALLLKCNRMIAMNVNEDILKNVVEKSKILR 81
Query: 59 VTEDGTKV 66
+++DG +
Sbjct: 82 LSDDGLAI 89
>gi|198457323|ref|XP_002136247.1| GA27847 [Drosophila pseudoobscura pseudoobscura]
gi|198142553|gb|EDY71286.1| GA27847 [Drosophila pseudoobscura pseudoobscura]
Length = 216
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 75/142 (52%), Gaps = 22/142 (15%)
Query: 117 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEVT 176
MEFY D+NL KDRF + + + P + + +FL NK+ L D + KAL +LLE+
Sbjct: 1 MEFYFGDANLTKDRFLRRYVDQDPYVPLEIFLTFNKMKPLAEDVKQIAKALNNCQLLELD 60
Query: 177 EDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGK 236
E KVRR + + D+ DV++ T+ +YG V YVSLP + T K
Sbjct: 61 ESALKVRRKIKMPDQRDVNDKTL-------------------RYGPVAYVSLPHYPGTKK 101
Query: 237 LKGFAFVEF---STKEEAAKAL 255
+K FAF+EF S E A KA
Sbjct: 102 IKEFAFIEFERSSALENAVKAF 123
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 40/70 (57%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEVT 60
MEFY D+NL KDRF + + + P + + +FL NK+ L D + KAL +LLE+
Sbjct: 1 MEFYFGDANLTKDRFLRRYVDQDPYVPLEIFLTFNKMKPLAEDVKQIAKALNNCQLLELD 60
Query: 61 EDGTKVKGNI 70
E KV+ I
Sbjct: 61 ESALKVRRKI 70
>gi|427787869|gb|JAA59386.1| Putative receptor-mediated endocytosis [Rhipicephalus pulchellus]
Length = 417
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 85/153 (55%), Gaps = 10/153 (6%)
Query: 109 LYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE-IEVSVFLKCNKLARLTHDPDDVVKAL 167
L +I+ +E+Y D NL +D+F L+E + + L N+L LT + D V AL
Sbjct: 17 LETKIITQVEYYFGDYNLPRDKFLQGKLKEDDGWVTIGTLLTFNRLRSLTTESDVVAAAL 76
Query: 168 RKS--KLLEVTEDGTKVRRTVVV-------QDKPDVDECTIYVEKLPPEAEHDYIESVFS 218
RKS +LLEV+EDGTK+RR+ + + +DE ++YV+ PP A D + F
Sbjct: 77 RKSTSQLLEVSEDGTKIRRSPAKPAPESNKEQQQKLDELSVYVKGFPPTATIDELLEFFG 136
Query: 219 KYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEA 251
++GK V + ++ + K KG F F+TKEEA
Sbjct: 137 RFGKCINVFMRRYPKSRKFKGSVFATFATKEEA 169
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE-IEVSVFLKCNKLARLTHDPDDVVKALRKS--KLL 57
+E+Y D NL +D+F L+E + + L N+L LT + D V ALRKS +LL
Sbjct: 25 VEYYFGDYNLPRDKFLQGKLKEDDGWVTIGTLLTFNRLRSLTTESDVVAAALRKSTSQLL 84
Query: 58 EVTEDGTKVK 67
EV+EDGTK++
Sbjct: 85 EVSEDGTKIR 94
>gi|301093259|ref|XP_002997478.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262110734|gb|EEY68786.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 265
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 79/149 (53%), Gaps = 6/149 (4%)
Query: 102 GRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPD 161
G+ ++K+L +Q +EFYLS+SNLR+D+F Q + + V FL NKL L
Sbjct: 7 GKSQRKRLQRQ----LEFYLSESNLRQDKFLQQAMDAQGFVPVREFLSFNKLKSLKATER 62
Query: 162 DVVKALRKSKLLEVTEDGTKVRRTVVVQDKPD--VDECTIYVEKLPPEAEHDYIESVFSK 219
++ KS + V + VV Q D D TIY++ EHD + F+K
Sbjct: 63 MILDEADKSSTIRVDRARCCIAPKVVPQVGQDHEADARTIYIDSFSAADEHDSLRRTFAK 122
Query: 220 YGKVTYVSLPKFKSTGKLKGFAFVEFSTK 248
+GKV VSLP+F + K KGF FVEFS +
Sbjct: 123 FGKVNLVSLPRFAQSKKFKGFGFVEFSER 151
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 25/40 (62%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARL 40
+EFYLS+SNLR+D+F Q + + V FL NKL L
Sbjct: 18 LEFYLSESNLRQDKFLQQAMDAQGFVPVREFLSFNKLKSL 57
>gi|360043471|emb|CCD78884.1| putative lupus la ribonucleoprotein [Schistosoma mansoni]
Length = 592
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 93/181 (51%), Gaps = 36/181 (19%)
Query: 112 QIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRK 169
+I+ +EFYLS+ NL +D FF Q +Q+ + I + + LKCN++ + D + +
Sbjct: 16 KILRQVEFYLSEGNLNRDSFFKQEMQKRDDGGIPIDLLLKCNRMIAMNVTEDILKNVVGT 75
Query: 170 SKLLEVTEDGTKV-------------RRTVVVQDKP----------DVDECTIYVEKLPP 206
SK+L+++ DG + RRT++V P DVD + P
Sbjct: 76 SKILKLSNDGLAIVRVLPLSELGPRERRTILVTGLPRLSIGITENADVDNTSYGHSSKPN 135
Query: 207 EAE-----------HDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKAL 255
E E D+I +VF +YG+V +VSLP++ + L+GFAFVEF T + A KA+
Sbjct: 136 EDELRNITSASWELGDWIRNVFEEYGEVLFVSLPRYHHSNSLRGFAFVEFRTSKSARKAV 195
Query: 256 E 256
+
Sbjct: 196 K 196
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
+EFYLS+ NL +D FF Q +Q+ + I + + LKCN++ + D + + SK+L+
Sbjct: 21 VEFYLSEGNLNRDSFFKQEMQKRDDGGIPIDLLLKCNRMIAMNVTEDILKNVVGTSKILK 80
Query: 59 VTEDGTKV 66
++ DG +
Sbjct: 81 LSNDGLAI 88
>gi|256074055|ref|XP_002573342.1| lupus la ribonucleoprotein [Schistosoma mansoni]
Length = 444
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 93/181 (51%), Gaps = 36/181 (19%)
Query: 112 QIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRK 169
+I+ +EFYLS+ NL +D FF Q +Q+ + I + + LKCN++ + D + +
Sbjct: 16 KILRQVEFYLSEGNLNRDSFFKQEMQKRDDGGIPIDLLLKCNRMIAMNVTEDILKNVVGT 75
Query: 170 SKLLEVTEDGTKV-------------RRTVVVQDKP----------DVDECTIYVEKLPP 206
SK+L+++ DG + RRT++V P DVD + P
Sbjct: 76 SKILKLSNDGLAIVRVLPLSELGPRERRTILVTGLPRLSIGITENADVDNTSYGHSSKPN 135
Query: 207 EAE-----------HDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKAL 255
E E D+I +VF +YG+V +VSLP++ + L+GFAFVEF T + A KA+
Sbjct: 136 EDELRNITSASWELGDWIRNVFEEYGEVLFVSLPRYHHSNSLRGFAFVEFRTSKSARKAV 195
Query: 256 E 256
+
Sbjct: 196 K 196
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
+EFYLS+ NL +D FF Q +Q+ + I + + LKCN++ + D + + SK+L+
Sbjct: 21 VEFYLSEGNLNRDSFFKQEMQKRDDGGIPIDLLLKCNRMIAMNVTEDILKNVVGTSKILK 80
Query: 59 VTEDGTKV 66
++ DG +
Sbjct: 81 LSNDGLAI 88
>gi|325186857|emb|CCA21403.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 249
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 91/159 (57%), Gaps = 13/159 (8%)
Query: 105 RKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE------IEVSVFLKCNKLARLTH 158
+ K + +QI +EFYLS+SNLR D+F LQ+ + I++ VFL K+ L
Sbjct: 5 KSKSVPKQIQAQLEFYLSESNLRNDKF----LQKQADSLQNFFIDLDVFLTFGKMIALKA 60
Query: 159 DPDDVVKALRKSKLLEVTEDGTKVR--RTVVVQDKPDVDECTIYVEKLPPEAEHDYIESV 216
+ +V+A KSK + + T++ + V+D +D TIY++K + +HD + +
Sbjct: 61 TRNMIVEAAEKSKKICIDPSKTRIGPVESPFVKDDTSLDR-TIYIDKFYRDHDHDSLRKL 119
Query: 217 FSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKAL 255
S++GKVT VSLP+F ST KGF FVEF E A +A+
Sbjct: 120 LSQFGKVTLVSLPRFDSTRHFKGFGFVEFENPEAAREAM 158
Score = 37.4 bits (85), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 10/72 (13%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE------IEVSVFLKCNKLARLTHDPDDVVKALRKS 54
+EFYLS+SNLR D+F LQ+ + I++ VFL K+ L + +V+A KS
Sbjct: 17 LEFYLSESNLRNDKF----LQKQADSLQNFFIDLDVFLTFGKMIALKATRNMIVEAAEKS 72
Query: 55 KLLEVTEDGTKV 66
K + + T++
Sbjct: 73 KKICIDPSKTRI 84
>gi|440792624|gb|ELR13833.1| RNA binding motif containing protein [Acanthamoeba castellanii str.
Neff]
Length = 430
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 85/143 (59%), Gaps = 8/143 (5%)
Query: 112 QIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRK 169
+I +E+Y SDSN R+D++ + ++PE IE++ +L +T D + VV+ +R
Sbjct: 44 KIKKQIEYYFSDSNYRRDKWLQEEAAKNPEGFIEIAKIAAFPRLQAMTTDLNVVVELMRS 103
Query: 170 SKLLEVTEDGTKVRRTVVVQDKPDVDEC---TIYVEKLPPEAEHDYIESVFSKYGKVTYV 226
S L V+EDG V+R+ Q P VD T++V+ LP +A D +E+VFS++G V +
Sbjct: 104 SDRLTVSEDGLLVKRS---QPLPAVDNSHLKTVFVKGLPEDATIDSVEAVFSQFGAVARI 160
Query: 227 SLPKFKSTGKLKGFAFVEFSTKE 249
+ + + T K KG A VEF T+E
Sbjct: 161 IIFRERETKKAKGEACVEFETEE 183
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
+E+Y SDSN R+D++ + ++PE IE++ +L +T D + VV+ +R S L
Sbjct: 49 IEYYFSDSNYRRDKWLQEEAAKNPEGFIEIAKIAAFPRLQAMTTDLNVVVELMRSSDRLT 108
Query: 59 VTEDGTKVK 67
V+EDG VK
Sbjct: 109 VSEDGLLVK 117
>gi|148680319|gb|EDL12266.1| La ribonucleoprotein domain family, member 7, isoform CRA_b [Mus
musculus]
Length = 465
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/69 (59%), Positives = 49/69 (71%)
Query: 193 DVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAA 252
D +E T+YVE LP H +IE VF K G V Y+S+P +KSTG KGFAFVEF TKE+AA
Sbjct: 10 DEEERTVYVELLPKNVTHSWIERVFGKCGNVVYISIPHYKSTGDPKGFAFVEFETKEQAA 69
Query: 253 KALELGLNP 261
KA+E NP
Sbjct: 70 KAIEFLNNP 78
>gi|320165306|gb|EFW42205.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 424
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/144 (37%), Positives = 75/144 (52%), Gaps = 5/144 (3%)
Query: 117 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 174
+EFY SD+NL ++ F Q ++ESP+ + V+ NKL L D + A + S LE
Sbjct: 18 LEFYYSDANLARNGFLMQRIRESPDGYVPVATIASFNKLVALGADESLIFAAAQASPALE 77
Query: 175 VTEDGTK--VRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFK 232
V D K VRR + + D+ TIYVE P D++ + F Y V V LPKF
Sbjct: 78 VCVDANKTAVRRRTPMPAAYNADDRTIYVEGFPKTTTIDHLRAFFEPYSHVLAVRLPKFH 137
Query: 233 STGKLKGFAFVEFSTKEEAAKALE 256
G KGFAFVE + E+ + L+
Sbjct: 138 G-GDPKGFAFVELALLEDVDRVLQ 160
Score = 45.1 bits (105), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
+EFY SD+NL ++ F Q ++ESP+ + V+ NKL L D + A + S LE
Sbjct: 18 LEFYYSDANLARNGFLMQRIRESPDGYVPVATIASFNKLVALGADESLIFAAAQASPALE 77
Query: 59 VTEDGTKV 66
V D K
Sbjct: 78 VCVDANKT 85
>gi|290978603|ref|XP_002672025.1| sjogren syndrome antigen B-like protein [Naegleria gruberi]
gi|284085598|gb|EFC39281.1| sjogren syndrome antigen B-like protein [Naegleria gruberi]
Length = 335
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 82/145 (56%), Gaps = 12/145 (8%)
Query: 111 QQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALR 168
+I +EFY SDSNL KD+F L+ +PE +E+ N++ +++ D D +V AL+
Sbjct: 9 NKIREQVEFYFSDSNLPKDKFLRSLVANNPEGYVELKTIASFNRMKQISTDMDLIVSALK 68
Query: 169 KSKLLEVTEDGTKVRRTVVVQDKPDVDEC---TIYVEKLPPE---AEHDYIESVFSKYGK 222
KS +LE+ +G VRR + P+VD T+Y + P + A D I+++F +GK
Sbjct: 69 KSSMLEIDAEGKLVRRITAL---PEVDTSNARTLYAKGFPLDESVANLDSIKALFEPFGK 125
Query: 223 VTYVSLPKFKSTGKLKGFAFVEFST 247
V V + K+ G KG AF+EF +
Sbjct: 126 VVCVRARREKN-GTFKGSAFIEFDS 149
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 44/69 (63%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
+EFY SDSNL KD+F L+ +PE +E+ N++ +++ D D +V AL+KS +LE
Sbjct: 15 VEFYFSDSNLPKDKFLRSLVANNPEGYVELKTIASFNRMKQISTDMDLIVSALKKSSMLE 74
Query: 59 VTEDGTKVK 67
+ +G V+
Sbjct: 75 IDAEGKLVR 83
>gi|167536921|ref|XP_001750131.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771460|gb|EDQ85127.1| predicted protein [Monosiga brevicollis MX1]
Length = 360
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 96/167 (57%), Gaps = 16/167 (9%)
Query: 99 DGGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARL 156
DG L +QI+ +E+Y SD NL +D F Q L+ES E I ++V L N+L +L
Sbjct: 18 DGSNVAVPADLEKQIIRQVEYYFSDRNLPRDSFMQQKLKESKEGWIPLTVLLTFNRLKQL 77
Query: 157 THDPDDVVKALRK--SKLLEVTEDGTKVRR--TVVVQDKPDVDECTIY-----VEKLPPE 207
+ DP+ + A++ L+EV++DGT +RR T ++D+ D++E +IY VEKL
Sbjct: 78 SEDPEVIAAAMQTVDDPLVEVSDDGTALRRAPTKPLEDQKDLNERSIYAKGFDVEKLTI- 136
Query: 208 AEHDYIESVFSKYGK-VTYVSLPKFKSTGKLKGFAFVEFSTKEEAAK 253
DY+++ S G VSL + + +LKG FV+ S++++A K
Sbjct: 137 ---DYVQTWISSMGCFAESVSLRRKLGSRELKGSVFVQLSSRDQAEK 180
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 46/71 (64%), Gaps = 4/71 (5%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRK--SKL 56
+E+Y SD NL +D F Q L+ES E I ++V L N+L +L+ DP+ + A++ L
Sbjct: 36 VEYYFSDRNLPRDSFMQQKLKESKEGWIPLTVLLTFNRLKQLSEDPEVIAAAMQTVDDPL 95
Query: 57 LEVTEDGTKVK 67
+EV++DGT ++
Sbjct: 96 VEVSDDGTALR 106
>gi|198457371|ref|XP_002136260.1| GA27855 [Drosophila pseudoobscura pseudoobscura]
gi|198142566|gb|EDY71299.1| GA27855 [Drosophila pseudoobscura pseudoobscura]
Length = 92
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 56/92 (60%)
Query: 117 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEVT 176
MEFY D+NL KDRF + + + P + + +FL NK+ L D + KAL S+LLE+
Sbjct: 1 MEFYFGDANLTKDRFLRRYVDQDPYVPLEIFLTFNKMKPLAEDVKQIAKALNNSQLLELD 60
Query: 177 EDGTKVRRTVVVQDKPDVDECTIYVEKLPPEA 208
E KVRR + D+ DV++ T+YVE LP E
Sbjct: 61 ESALKVRRKTKMPDQRDVNDKTLYVEALPDEG 92
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 40/67 (59%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEVT 60
MEFY D+NL KDRF + + + P + + +FL NK+ L D + KAL S+LLE+
Sbjct: 1 MEFYFGDANLTKDRFLRRYVDQDPYVPLEIFLTFNKMKPLAEDVKQIAKALNNSQLLELD 60
Query: 61 EDGTKVK 67
E KV+
Sbjct: 61 ESALKVR 67
>gi|90076032|dbj|BAE87696.1| unnamed protein product [Macaca fascicularis]
Length = 250
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 72/115 (62%), Gaps = 3/115 (2%)
Query: 103 RHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDP 160
R R KQ+ I ++F+ D+NL KDRF + +++S + +++S+ + NK+ +LT D
Sbjct: 28 RSRVKQVLADIAKQVDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDG 87
Query: 161 DDVVKALRKSKLLEVTEDGTKVRRTVVVQDKP-DVDECTIYVEKLPPEAEHDYIE 214
+ +ALR S ++E+ +GT++RR + ++P D DE T+YVE LP H +IE
Sbjct: 88 KLIARALRSSAVVELDLEGTRIRRKKPLGERPKDEDERTVYVELLPKNVNHSWIE 142
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 47/69 (68%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
++F+ D+NL KDRF + +++S + +++S+ + NK+ +LT D + +ALR S ++E
Sbjct: 42 VDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALRSSAVVE 101
Query: 59 VTEDGTKVK 67
+ +GT+++
Sbjct: 102 LDLEGTRIR 110
>gi|346468663|gb|AEO34176.1| hypothetical protein [Amblyomma maculatum]
Length = 398
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 81/152 (53%), Gaps = 9/152 (5%)
Query: 109 LYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE-IEVSVFLKCNKLARLTHDPDDVVKAL 167
L +I+ +E+Y D NL +D+F ++E + + L N+L LT + + V +AL
Sbjct: 16 LDAKIIKQVEYYFGDFNLPRDKFLQGKVKEDDGWVTIETLLTFNRLKSLTTEENVVAEAL 75
Query: 168 RKS--KLLEVTEDGTKVRRTVVV------QDKPDVDECTIYVEKLPPEAEHDYIESVFSK 219
+KS +LLEV+ DG K+RR+ +++ +DE T+Y + PP D + F +
Sbjct: 76 KKSTNQLLEVSSDGKKIRRSPAKPLPDGDKERQKLDELTVYAKGFPPTTTIDELLEFFGQ 135
Query: 220 YGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEA 251
+G+ V + +F K KG F F+TK EA
Sbjct: 136 FGQCINVFMRRFPGNRKFKGSVFATFATKAEA 167
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE-IEVSVFLKCNKLARLTHDPDDVVKALRKS--KLL 57
+E+Y D NL +D+F ++E + + L N+L LT + + V +AL+KS +LL
Sbjct: 24 VEYYFGDFNLPRDKFLQGKVKEDDGWVTIETLLTFNRLKSLTTEENVVAEALKKSTNQLL 83
Query: 58 EVTEDGTKVK 67
EV+ DG K++
Sbjct: 84 EVSSDGKKIR 93
>gi|157868870|ref|XP_001682987.1| putative la RNA binding protein [Leishmania major strain Friedlin]
gi|68223870|emb|CAJ04081.1| putative la RNA binding protein [Leishmania major strain Friedlin]
Length = 339
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 86/180 (47%), Gaps = 14/180 (7%)
Query: 109 LYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKA 166
L +I +EFY SD N+ KD F + E PE I + V L N+L LT DP + +A
Sbjct: 4 LADKIRRQVEFYFSDVNVAKDVFLKSKMAEDPEGFIPLEVLLTFNRLNSLTKDPKVLAEA 63
Query: 167 LRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYV 226
L S L + +DG VRR + + DE T+YV+ +P A + ++ FS +G V V
Sbjct: 64 LASSDKLVMNKDGLSVRRKDALPESIQTDEQTVYVKPVPATASLEQLQEFFSAHGTVLAV 123
Query: 227 SLPKFKSTGK-------LKGFAFVEFSTKEEAAKALELGLNPCPPDYQSSILTTTSRLSF 279
F+ K K FV F++KE+A + + PP Y L+ + ++
Sbjct: 124 WRRYFQGGSKDAPVESRTKPSVFVVFASKEDAERFVA-----APPQYDGVQLSAQMKTTY 178
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 46/85 (54%), Gaps = 6/85 (7%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
+EFY SD N+ KD F + E PE I + V L N+L LT DP + +AL S L
Sbjct: 12 VEFYFSDVNVAKDVFLKSKMAEDPEGFIPLEVLLTFNRLNSLTKDPKVLAEALASSDKLV 71
Query: 59 VTEDGTKVKGNIIRHFLVPISMETE 83
+ +DG V+ R +P S++T+
Sbjct: 72 MNKDGLSVR----RKDALPESIQTD 92
>gi|156397408|ref|XP_001637883.1| predicted protein [Nematostella vectensis]
gi|156224999|gb|EDO45820.1| predicted protein [Nematostella vectensis]
Length = 386
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 96/187 (51%), Gaps = 20/187 (10%)
Query: 98 KDGGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKC----NKL 153
K+G + L Q+I+ +EFY D NL +D+F L Q++ E + V +C N+L
Sbjct: 8 KNGNATEKLSPLEQKIVKQIEFYFGDKNLPRDKF---LRQKTEEDDGWVTFECLATFNRL 64
Query: 154 ARLTHDPDDVVKALRKSK--LLEVTEDGTKVRRT-------VVVQDKPDVDECTIYVEKL 204
++ D + + K ++KS L+EV+ED TKVRRT + + + T+YV+
Sbjct: 65 KSMSDDVNFLAKTMKKSSSDLIEVSEDLTKVRRTKSKPVEELTTEARQKAKAKTVYVKGF 124
Query: 205 PPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNPCPP 264
P EA D ++ F GK+ ++ + K + + KG F+EF+T EA +E
Sbjct: 125 PKEATLDELQEYFEGKGKIVFIMMRKTLESKEFKGSVFIEFATLPEAKAFVE----EKDT 180
Query: 265 DYQSSIL 271
YQ ++L
Sbjct: 181 KYQDNVL 187
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 9/73 (12%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKC----NKLARLTHDPDDVVKALRKSK- 55
+EFY D NL +D+F L Q++ E + V +C N+L ++ D + + K ++KS
Sbjct: 27 IEFYFGDKNLPRDKF---LRQKTEEDDGWVTFECLATFNRLKSMSDDVNFLAKTMKKSSS 83
Query: 56 -LLEVTEDGTKVK 67
L+EV+ED TKV+
Sbjct: 84 DLIEVSEDLTKVR 96
>gi|242005514|ref|XP_002423610.1| La/SS-B, putative [Pediculus humanus corporis]
gi|212506758|gb|EEB10872.1| La/SS-B, putative [Pediculus humanus corporis]
Length = 365
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 92/168 (54%), Gaps = 14/168 (8%)
Query: 109 LYQQIMNLMEFYLSDSNLRKDRF-FSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKAL 167
+ ++I+ +E+Y D+NLRKD+F +Q+ + I +SV L+ +LA+L+ DP + AL
Sbjct: 33 INEEILKQVEYYFGDNNLRKDKFMLNQIKMDDGWIPMSVMLEFRRLAKLSSDPKVIANAL 92
Query: 168 RKSKLLEVTEDG--TKVRRT-------VVVQDKPDVDECTIYVEKLPPEAEHDYIESVFS 218
KSKL+EV E G K+RR+ + + ++ +IY + P + D + + F+
Sbjct: 93 GKSKLIEVDESGEEIKIRRSPDYPLEELTSEKFMELRSRSIYCKGFPLDYTMDDLITFFN 152
Query: 219 KYGKVTYVSLPKFK----STGKLKGFAFVEFSTKEEAAKALELGLNPC 262
YG + + K+ T K KG FV ++TKE+A + L+L C
Sbjct: 153 NYGPFENIIMRKYNDKLSKTYKFKGSVFVTYATKEKAKEFLDLESVKC 200
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Query: 1 MEFYLSDSNLRKDRF-FSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEV 59
+E+Y D+NLRKD+F +Q+ + I +SV L+ +LA+L+ DP + AL KSKL+EV
Sbjct: 41 VEYYFGDNNLRKDKFMLNQIKMDDGWIPMSVMLEFRRLAKLSSDPKVIANALGKSKLIEV 100
Query: 60 TEDGTKVK 67
E G ++K
Sbjct: 101 DESGEEIK 108
>gi|452823475|gb|EME30485.1| lupus La protein [Galdieria sulphuraria]
Length = 340
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 77/142 (54%), Gaps = 6/142 (4%)
Query: 109 LYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKA 166
L ++ N +EFY SD+NL +D+F ES + + + + +L LT D + +A
Sbjct: 13 LEDKVRNQVEFYFSDANLPRDKFLRSKTGESGDGYVYLDIIASFKRLRSLTTDMSIIREA 72
Query: 167 LRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESV---FSKYGKV 223
L+ S L+E+ EDGTK+RR + TIYV+ P + E + +ESV F+ YG V
Sbjct: 73 LKNSNLVELNEDGTKLRRKSALPCSISNKRKTIYVKGFPQQKEPE-LESVVELFAPYGVV 131
Query: 224 TYVSLPKFKSTGKLKGFAFVEF 245
V ++ T K KG AF+EF
Sbjct: 132 CSVRFRRYPDTKKFKGSAFIEF 153
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 6/82 (7%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
+EFY SD+NL +D+F ES + + + + +L LT D + +AL+ S L+E
Sbjct: 21 VEFYFSDANLPRDKFLRSKTGESGDGYVYLDIIASFKRLRSLTTDMSIIREALKNSNLVE 80
Query: 59 VTEDGTKVKGNIIRHFLVPISM 80
+ EDGTK++ R +P S+
Sbjct: 81 LNEDGTKLR----RKSALPCSI 98
>gi|398014774|ref|XP_003860577.1| la RNA binding protein, putative [Leishmania donovani]
gi|322498799|emb|CBZ33871.1| la RNA binding protein, putative [Leishmania donovani]
Length = 336
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 85/180 (47%), Gaps = 14/180 (7%)
Query: 109 LYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKA 166
L +I +EFY SD N+ KD F + E PE I + V L N+L LT DP + +A
Sbjct: 4 LADKIRRQVEFYFSDVNVAKDVFLKSKMAEDPEGFIPLEVLLTFNRLNSLTKDPKVLAEA 63
Query: 167 LRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYV 226
L S L + +DG VRR + + DE T+YV+ +P A + ++ FS +G V V
Sbjct: 64 LASSDKLVMNKDGLSVRRKDALPESIQTDEQTVYVKPVPATASLEQLQEFFSAHGTVLAV 123
Query: 227 SLPKFKSTGK-------LKGFAFVEFSTKEEAAKALELGLNPCPPDYQSSILTTTSRLSF 279
F+ K K FV F++K +A K + PP Y L+ + ++
Sbjct: 124 WRRYFQGGSKDAPVESRTKPSVFVVFASKTDAEKFVA-----APPQYDGVQLSAQMKTAY 178
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 46/85 (54%), Gaps = 6/85 (7%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
+EFY SD N+ KD F + E PE I + V L N+L LT DP + +AL S L
Sbjct: 12 VEFYFSDVNVAKDVFLKSKMAEDPEGFIPLEVLLTFNRLNSLTKDPKVLAEALASSDKLV 71
Query: 59 VTEDGTKVKGNIIRHFLVPISMETE 83
+ +DG V+ R +P S++T+
Sbjct: 72 MNKDGLSVR----RKDALPESIQTD 92
>gi|168042691|ref|XP_001773821.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674936|gb|EDQ61438.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 345
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 86/169 (50%), Gaps = 22/169 (13%)
Query: 112 QIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTH------DPD---- 161
+++ MEFY SDSNL D F + ++ES + V + L C H DP
Sbjct: 14 KVLRQMEFYFSDSNLPGDAFLLKNIEESDDDMVELSLLCTFQKMRKHLGVNESDPTKFPA 73
Query: 162 ----DVVKALR-KSKLLEVTEDGTKVRRTVVVQDKP-----DVDECTIYVEKLPPEAEHD 211
V + LR KS L V+EDG +V R +Q KP +VD +I P +
Sbjct: 74 DKLAGVAEVLRNKSTFLRVSEDGKRVGRVTKLQ-KPEVVQAEVDARSIAANPFPYTITME 132
Query: 212 YIESVFSKYGKVTYVSLPKFKSTGK-LKGFAFVEFSTKEEAAKALELGL 259
+E+ F +YG+V V LPK S+ L GFA VEFS++EEA K L++ L
Sbjct: 133 EVETFFKQYGQVKSVRLPKHASSKNVLSGFAVVEFSSEEEAKKILKMEL 181
>gi|148688487|gb|EDL20434.1| mCG1033211 [Mus musculus]
Length = 126
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/63 (58%), Positives = 44/63 (69%)
Query: 199 IYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELG 258
+YVE LP H + E VF K G V Y+S+P +KSTG KGFAFVEF TKE+AAKA+E
Sbjct: 2 VYVELLPKNVTHSWFERVFGKCGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIEFL 61
Query: 259 LNP 261
NP
Sbjct: 62 NNP 64
>gi|413937725|gb|AFW72276.1| hypothetical protein ZEAMMB73_610914 [Zea mays]
Length = 467
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 88/170 (51%), Gaps = 22/170 (12%)
Query: 111 QQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTH---DPD------ 161
++++ +EFY SDSNL +D+F + +++S + VS+ L C+ +H D D
Sbjct: 15 KKVLRQVEFYFSDSNLPRDKFLRETVEQSDDGLVSLPLICSFSRMKSHLGLDADVKPETV 74
Query: 162 ------DVVKALRKSKLLEVTEDGTKVRRTVVVQDKPD-----VDECTIYVEKLPPEAEH 210
V + LR S L V+EDG K+ R + KPD VD TI V LP +
Sbjct: 75 PEETVLAVAEVLRPSPALRVSEDGKKIGRASELL-KPDEIIEQVDSRTIAVSPLPCNVKQ 133
Query: 211 DYIESVFSKYGKVTYVSLPKFKSTGK-LKGFAFVEFSTKEEAAKALELGL 259
+ ++S F+ Y KV V LP+ + K G A VEFS +EEA + +E L
Sbjct: 134 EDVQSFFTNYAKVNSVRLPRNIANKKHFCGTALVEFSEEEEAKRIMETAL 183
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 15/81 (18%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTH---DPD------------ 45
+EFY SDSNL +D+F + +++S + VS+ L C+ +H D D
Sbjct: 21 VEFYFSDSNLPRDKFLRETVEQSDDGLVSLPLICSFSRMKSHLGLDADVKPETVPEETVL 80
Query: 46 DVVKALRKSKLLEVTEDGTKV 66
V + LR S L V+EDG K+
Sbjct: 81 AVAEVLRPSPALRVSEDGKKI 101
>gi|302842020|ref|XP_002952554.1| hypothetical protein VOLCADRAFT_105531 [Volvox carteri f.
nagariensis]
gi|300262193|gb|EFJ46401.1| hypothetical protein VOLCADRAFT_105531 [Volvox carteri f.
nagariensis]
Length = 1040
Score = 78.2 bits (191), Expect = 4e-12, Method: Composition-based stats.
Identities = 53/166 (31%), Positives = 85/166 (51%), Gaps = 19/166 (11%)
Query: 108 QLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVK 165
+L ++ +EFY SD+NL D+ + +++ PE + V +F K+ L+ D + +
Sbjct: 42 ELLSALVKQVEFYFSDANLPTDKKLLKQIRKDPEGYVPVKLFANFRKVRALSKDVGIITE 101
Query: 166 ALRKSKLLEVTEDGTKVRRTVVVQ--DKPDVDECTIYVEKLP--PEAEHDYIESVFSKYG 221
ALR + LL++++DG +VRR V V D D+ TI VE LP P + + +F YG
Sbjct: 102 ALRSASLLQLSQDGKRVRRIVPVPEYDISDIQRRTIVVENLPGNPSPTIESVTDMFRVYG 161
Query: 222 KVTYVSLPKFKSTGKLKGF-------------AFVEFSTKEEAAKA 254
+V V + +S GKL + A+VEF +E A A
Sbjct: 162 RVKLVRICSRESKGKLPSWLTSSCQNMGGTQHAYVEFEDEEGAILA 207
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/100 (30%), Positives = 56/100 (56%), Gaps = 17/100 (17%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
+EFY SD+NL D+ + +++ PE + V +F K+ L+ D + +ALR + LL+
Sbjct: 51 VEFYFSDANLPTDKKLLKQIRKDPEGYVPVKLFANFRKVRALSKDVGIITEALRSASLLQ 110
Query: 59 VTEDGTKVKGNIIRHFLVPISMETEASDNVDKDLSDLQRK 98
+++DG +V+ +VP+ + D+SD+QR+
Sbjct: 111 LSQDGKRVRR------IVPVP---------EYDISDIQRR 135
>gi|413937724|gb|AFW72275.1| hypothetical protein ZEAMMB73_610914 [Zea mays]
Length = 433
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 88/170 (51%), Gaps = 22/170 (12%)
Query: 111 QQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTH---DPD------ 161
++++ +EFY SDSNL +D+F + +++S + VS+ L C+ +H D D
Sbjct: 15 KKVLRQVEFYFSDSNLPRDKFLRETVEQSDDGLVSLPLICSFSRMKSHLGLDADVKPETV 74
Query: 162 ------DVVKALRKSKLLEVTEDGTKVRRTVVVQDKPD-----VDECTIYVEKLPPEAEH 210
V + LR S L V+EDG K+ R + KPD VD TI V LP +
Sbjct: 75 PEETVLAVAEVLRPSPALRVSEDGKKIGRASELL-KPDEIIEQVDSRTIAVSPLPCNVKQ 133
Query: 211 DYIESVFSKYGKVTYVSLPKFKSTGK-LKGFAFVEFSTKEEAAKALELGL 259
+ ++S F+ Y KV V LP+ + K G A VEFS +EEA + +E L
Sbjct: 134 EDVQSFFTNYAKVNSVRLPRNIANKKHFCGTALVEFSEEEEAKRIMETAL 183
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 15/81 (18%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTH---DPD------------ 45
+EFY SDSNL +D+F + +++S + VS+ L C+ +H D D
Sbjct: 21 VEFYFSDSNLPRDKFLRETVEQSDDGLVSLPLICSFSRMKSHLGLDADVKPETVPEETVL 80
Query: 46 DVVKALRKSKLLEVTEDGTKV 66
V + LR S L V+EDG K+
Sbjct: 81 AVAEVLRPSPALRVSEDGKKI 101
>gi|154337072|ref|XP_001564769.1| putative la RNA binding protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134061807|emb|CAM38840.1| putative la RNA binding protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 336
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 85/180 (47%), Gaps = 14/180 (7%)
Query: 109 LYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKA 166
L +I +EFY SD N+ KD F + E PE I + V L N+L LT DP V +A
Sbjct: 4 LAAKICRQVEFYFSDVNVAKDVFLKSKMAEDPEGFISLEVLLTFNRLNSLTKDPKVVAEA 63
Query: 167 LRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYV 226
L S L + +G VRR + + DE T+YV+ LP A + ++ FS +G V V
Sbjct: 64 LAGSDKLVMHTNGLSVRRKDSLPESIQTDEQTVYVKPLPALATLEQLQEFFSAHGTVLAV 123
Query: 227 SLPKFKSTGK-------LKGFAFVEFSTKEEAAKALELGLNPCPPDYQSSILTTTSRLSF 279
F+ K K FV F++K +A K + PP Y L+ ++++
Sbjct: 124 WRRYFQGGNKDAPVESRTKPSVFVVFASKADAEKFVA-----APPQYDGVQLSAQMKVAY 178
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
+EFY SD N+ KD F + E PE I + V L N+L LT DP V +AL S L
Sbjct: 12 VEFYFSDVNVAKDVFLKSKMAEDPEGFISLEVLLTFNRLNSLTKDPKVVAEALAGSDKLV 71
Query: 59 VTEDGTKVKGNIIRHFLVPISMETE 83
+ +G V+ R +P S++T+
Sbjct: 72 MHTNGLSVR----RKDSLPESIQTD 92
>gi|291228703|ref|XP_002734313.1| PREDICTED: autoantigen La-like [Saccoglossus kowalevskii]
Length = 430
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 83/162 (51%), Gaps = 16/162 (9%)
Query: 108 QLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE-IEVSVFLKCNKLARLTHDPDDVVKA 166
+L +I+ +E+Y D+NLR+DRF + +E I + + N+L L+ D + A
Sbjct: 14 KLETKIIRQVEYYFGDANLRRDRFLQEKSKEDDGWISLETLVTFNRLKSLSTDFKVITGA 73
Query: 167 LRKSK--LLEVTEDGTKVRRTVVVQDKP----------DVDECTIYVEKLPPEAEHDYIE 214
L+KS+ LLE+ ED K+RR+ KP D+ ++Y + P +A D I+
Sbjct: 74 LKKSQSGLLEINEDELKLRRSTA---KPLPEESDDLRADIKARSVYCKGFPSDATLDDIQ 130
Query: 215 SVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
F YGKV ++ + K T + KG F F +E A K +E
Sbjct: 131 EFFDGYGKVAFIQMRKTLDTKEFKGSVFATFEDEEAAKKFVE 172
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE-IEVSVFLKCNKLARLTHDPDDVVKALRKSK--LL 57
+E+Y D+NLR+DRF + +E I + + N+L L+ D + AL+KS+ LL
Sbjct: 23 VEYYFGDANLRRDRFLQEKSKEDDGWISLETLVTFNRLKSLSTDFKVITGALKKSQSGLL 82
Query: 58 EVTEDGTKVK 67
E+ ED K++
Sbjct: 83 EINEDELKLR 92
>gi|254568600|ref|XP_002491410.1| hypothetical protein [Komagataella pastoris GS115]
gi|238031207|emb|CAY69130.1| hypothetical protein PAS_chr2-1_0852 [Komagataella pastoris GS115]
gi|328352079|emb|CCA38478.1| Lupus La protein homolog B [Komagataella pastoris CBS 7435]
Length = 254
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 101/190 (53%), Gaps = 11/190 (5%)
Query: 108 QLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE-IEVSVFLKCNKLARLTHDPDD-VVK 165
Q ++I+ +EFY SDSNL KDRF Q + + +SV ++ + P + +V+
Sbjct: 5 QSKKEILEQVEFYFSDSNLPKDRFLYTTAQANEGWVSISVLANFTRMRKFR--PIELIVE 62
Query: 166 ALRKSK-LLEVTEDGTKVRRTVVV---QDKPDVDECTIYVEKLPPEAEHDYIESVFSKYG 221
ALR+S+ LLEV+E+G VRR V + +++ + + ++ VE +P +A + ++ F KYG
Sbjct: 63 ALRESENLLEVSENGEMVRRKVPLPSREEQIKIAQRSVVVEDVPEDATLEQLQEFFKKYG 122
Query: 222 KVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNPCPPDYQSSILTTTSRLSFGI 281
K V + + + T + G VEFS+ EE LE P + L TS++++
Sbjct: 123 KTNQVRMKRNRKTKEFFGKVIVEFSSVEEQKAFLEAEPKPT---FNEKELKITSKVAYDE 179
Query: 282 TPLGFESGGW 291
+ + G+
Sbjct: 180 SRESKRTAGF 189
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE-IEVSVFLKCNKLARLTHDPDDVVKALRKSK-LLE 58
+EFY SDSNL KDRF Q + + +SV ++ + + +V+ALR+S+ LLE
Sbjct: 14 VEFYFSDSNLPKDRFLYTTAQANEGWVSISVLANFTRMRKF-RPIELIVEALRESENLLE 72
Query: 59 VTEDGTKVKGNI 70
V+E+G V+ +
Sbjct: 73 VSENGEMVRRKV 84
>gi|146085813|ref|XP_001465365.1| putative la RNA binding protein [Leishmania infantum JPCM5]
gi|134069463|emb|CAM67786.1| putative la RNA binding protein [Leishmania infantum JPCM5]
Length = 336
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 84/180 (46%), Gaps = 14/180 (7%)
Query: 109 LYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKA 166
L +I +EFY SD N+ KD F + E PE I + V L N+L LT DP + +A
Sbjct: 4 LADKIRRQVEFYFSDVNVAKDVFLKSKMAEDPEGFIPLEVLLTFNRLNSLTKDPKVLAEA 63
Query: 167 LRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYV 226
L S L + +DG VRR + + DE T+YV+ +P A + ++ FS G V V
Sbjct: 64 LASSDKLVMNKDGLSVRRKDALPESIQTDEQTVYVKPVPATASLEQLQEFFSAQGTVLAV 123
Query: 227 SLPKFKSTGK-------LKGFAFVEFSTKEEAAKALELGLNPCPPDYQSSILTTTSRLSF 279
F+ K K FV F++K +A K + PP Y L+ + ++
Sbjct: 124 WRRYFQGGSKDAPVESRTKPSVFVVFASKTDAEKFVA-----APPQYDGVQLSAQMKTAY 178
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 46/85 (54%), Gaps = 6/85 (7%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
+EFY SD N+ KD F + E PE I + V L N+L LT DP + +AL S L
Sbjct: 12 VEFYFSDVNVAKDVFLKSKMAEDPEGFIPLEVLLTFNRLNSLTKDPKVLAEALASSDKLV 71
Query: 59 VTEDGTKVKGNIIRHFLVPISMETE 83
+ +DG V+ R +P S++T+
Sbjct: 72 MNKDGLSVR----RKDALPESIQTD 92
>gi|403295688|ref|XP_003938763.1| PREDICTED: la-related protein 7-like [Saimiri boliviensis
boliviensis]
Length = 219
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/60 (60%), Positives = 43/60 (71%)
Query: 202 EKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNP 261
E LP H +IE VF K G V Y+S+P +KSTG KGFAFVEF TKE+AAKA+E+G P
Sbjct: 32 ELLPKNVNHSWIERVFGKCGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIEVGPYP 91
>gi|401421611|ref|XP_003875294.1| putative la RNA binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322491531|emb|CBZ26802.1| putative la RNA binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 339
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 84/180 (46%), Gaps = 14/180 (7%)
Query: 109 LYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKA 166
L +I +EFY SD N+ KD F + E PE I + V L N+L LT DP + +A
Sbjct: 4 LTDKIRRQVEFYFSDVNVAKDVFLKSKMAEDPEGFIPLEVLLTFNRLNSLTKDPKVLAEA 63
Query: 167 LRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYV 226
L S L + +DG VRR + + DE T+YV+ +P A + ++ FS + V V
Sbjct: 64 LASSDKLVMNKDGLSVRRKDALPESIQTDEQTVYVKPVPATASLEQLQEFFSAHATVLAV 123
Query: 227 SLPKFKSTGK-------LKGFAFVEFSTKEEAAKALELGLNPCPPDYQSSILTTTSRLSF 279
F+ K K FV F++K +A K + PP Y L+ + ++
Sbjct: 124 WRRYFQGGSKDAPLESRTKPSVFVVFASKADAEKFVA-----APPQYDGVQLSAQMKTAY 178
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 46/85 (54%), Gaps = 6/85 (7%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
+EFY SD N+ KD F + E PE I + V L N+L LT DP + +AL S L
Sbjct: 12 VEFYFSDVNVAKDVFLKSKMAEDPEGFIPLEVLLTFNRLNSLTKDPKVLAEALASSDKLV 71
Query: 59 VTEDGTKVKGNIIRHFLVPISMETE 83
+ +DG V+ R +P S++T+
Sbjct: 72 MNKDGLSVR----RKDALPESIQTD 92
>gi|349605869|gb|AEQ00960.1| La-like protein 7-like protein, partial [Equus caballus]
Length = 452
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/58 (60%), Positives = 41/58 (70%)
Query: 204 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNP 261
LP H +IE VF K G V Y+S+P +KSTG KGFAFVEF TKE+AAKA+E NP
Sbjct: 2 LPKNVNHSWIERVFGKCGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIEFLNNP 59
>gi|407261198|ref|XP_003946189.1| PREDICTED: la-related protein 7 [Mus musculus]
gi|407263138|ref|XP_003945433.1| PREDICTED: la-related protein 7 [Mus musculus]
Length = 318
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/61 (59%), Positives = 43/61 (70%)
Query: 201 VEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLN 260
+E LP H +IE VF K G V Y+S+P +KSTG KGFAFVEF TKE+AAKA+E N
Sbjct: 14 MELLPKNVTHSWIERVFGKCGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIEFLNN 73
Query: 261 P 261
P
Sbjct: 74 P 74
>gi|328869653|gb|EGG18030.1| hypothetical protein DFA_06697 [Dictyostelium fasciculatum]
Length = 384
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 87/161 (54%), Gaps = 19/161 (11%)
Query: 112 QIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRK 169
+I+ ++FYLSDSNL KDRF S+L++ S + I + L N++ L ++ +K + +
Sbjct: 8 EIIKQLQFYLSDSNLYKDRFLSKLVENSNQGWISIDQLLSFNRMKELKV-TNESIKQVFQ 66
Query: 170 SKLLE-----------VTEDGTKVRRTVVVQDKP----DVDECTIYVEKLPPEAEHDYIE 214
+ L + V + T ++R + Q ++D TIY+E + E + I+
Sbjct: 67 NDLFKQQQGEQETGVTVNQQETMIKRNIPFQVNQQVLNEIDLKTIYIEPILIEDTIENIK 126
Query: 215 SVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKAL 255
+F +G++ Y S+P+ KGFAF+EF++KE A AL
Sbjct: 127 EIFKTFGEIVYTSIPRLPDRTP-KGFAFIEFTSKESANNAL 166
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 28/42 (66%), Gaps = 2/42 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARL 40
++FYLSDSNL KDRF S+L++ S + I + L N++ L
Sbjct: 13 LQFYLSDSNLYKDRFLSKLVENSNQGWISIDQLLSFNRMKEL 54
>gi|116310718|emb|CAH67515.1| OSIGBa0092E01.10 [Oryza sativa Indica Group]
gi|125548889|gb|EAY94711.1| hypothetical protein OsI_16489 [Oryza sativa Indica Group]
Length = 435
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 86/165 (52%), Gaps = 20/165 (12%)
Query: 111 QQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN-----KLARLTHD------ 159
++++ +EFY SDSNL +D F + ++ES + VS+ L C+ K L D
Sbjct: 17 KEVLRQVEFYFSDSNLPRDNFLRKTVEESEDGLVSLALICSFSRMKKHLGLDADVKQETM 76
Query: 160 PDDVVKA----LRKSKLLEVTEDGTKVRRTVVVQD----KPDVDECTIYVEKLPPEAEHD 211
P++ V A LR+S L VTEDG KV R++ + VD TI P + +
Sbjct: 77 PEETVLAVAEVLRRSSALRVTEDGKKVGRSIELSKLDEIMEQVDSRTIAASPFPYNVKLE 136
Query: 212 YIESVFSKYGKVTYVSLPKFKSTGK-LKGFAFVEFSTKEEAAKAL 255
++S F++YGKV V LP+ + + G A VEFS +EEA L
Sbjct: 137 DVQSFFAQYGKVNSVRLPRHIADKRHFCGTALVEFSEEEEANAVL 181
Score = 44.7 bits (104), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 46/85 (54%), Gaps = 15/85 (17%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN-----KLARLTHD------PDDVVK 49
+EFY SDSNL +D F + ++ES + VS+ L C+ K L D P++ V
Sbjct: 23 VEFYFSDSNLPRDNFLRKTVEESEDGLVSLALICSFSRMKKHLGLDADVKQETMPEETVL 82
Query: 50 A----LRKSKLLEVTEDGTKVKGNI 70
A LR+S L VTEDG KV +I
Sbjct: 83 AVAEVLRRSSALRVTEDGKKVGRSI 107
>gi|115459214|ref|NP_001053207.1| Os04g0497600 [Oryza sativa Japonica Group]
gi|38345389|emb|CAE03115.2| OSJNBa0067K08.18 [Oryza sativa Japonica Group]
gi|113564778|dbj|BAF15121.1| Os04g0497600 [Oryza sativa Japonica Group]
gi|215704462|dbj|BAG93896.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765289|dbj|BAG86986.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 435
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 87/166 (52%), Gaps = 22/166 (13%)
Query: 111 QQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHD----------- 159
++++ +EFY SDSNL +D F + ++ES + VS+ L C+ +R+
Sbjct: 17 KEVLRQVEFYFSDSNLPRDNFLRKTVEESEDGLVSLALICS-FSRMKKHLGLDLDVKQET 75
Query: 160 -PDDVVKA----LRKSKLLEVTEDGTKVRRTVVVQDKPD----VDECTIYVEKLPPEAEH 210
P++ V A LR+S L VTEDG KV R++ + + VD TI P +
Sbjct: 76 MPEETVLAVAEVLRRSSALRVTEDGKKVGRSIELSKLDEIMEQVDSRTIAASPFPYNVKL 135
Query: 211 DYIESVFSKYGKVTYVSLPKFKSTGK-LKGFAFVEFSTKEEAAKAL 255
+ ++S F++YGKV V LP+ + + G A VEFS +EEA L
Sbjct: 136 EDVQSFFAQYGKVNSVRLPRHIADKRHFCGTALVEFSEEEEANAVL 181
Score = 44.3 bits (103), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 17/86 (19%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHD------------PDDVV 48
+EFY SDSNL +D F + ++ES + VS+ L C+ +R+ P++ V
Sbjct: 23 VEFYFSDSNLPRDNFLRKTVEESEDGLVSLALICS-FSRMKKHLGLDLDVKQETMPEETV 81
Query: 49 KA----LRKSKLLEVTEDGTKVKGNI 70
A LR+S L VTEDG KV +I
Sbjct: 82 LAVAEVLRRSSALRVTEDGKKVGRSI 107
>gi|125572738|gb|EAZ14253.1| hypothetical protein OsJ_04179 [Oryza sativa Japonica Group]
Length = 435
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 86/166 (51%), Gaps = 22/166 (13%)
Query: 111 QQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHD----------- 159
++++ +EFY SDSNL +D F + ++ES + VS+ L C+ +R+
Sbjct: 17 KEVLRQVEFYFSDSNLPRDNFLRKTVEESEDGLVSLALICS-FSRMKKHLGLDLDVKQET 75
Query: 160 -PDDVVKA----LRKSKLLEVTEDGTKVRRTVVVQD----KPDVDECTIYVEKLPPEAEH 210
P++ V A LR+S L VTEDG KV R++ + VD TI P +
Sbjct: 76 MPEETVLAVAEVLRRSSALRVTEDGKKVGRSIELSKLDEIMEQVDSRTIAASPFPYNVKL 135
Query: 211 DYIESVFSKYGKVTYVSLPKFKSTGK-LKGFAFVEFSTKEEAAKAL 255
+ ++S F++YGKV V LP+ + + G A VEFS +EEA L
Sbjct: 136 EDVQSFFAQYGKVNSVRLPRHIADKRHFCGTALVEFSEEEEANAVL 181
Score = 44.3 bits (103), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 17/86 (19%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHD------------PDDVV 48
+EFY SDSNL +D F + ++ES + VS+ L C+ +R+ P++ V
Sbjct: 23 VEFYFSDSNLPRDNFLRKTVEESEDGLVSLALICS-FSRMKKHLGLDLDVKQETMPEETV 81
Query: 49 KA----LRKSKLLEVTEDGTKVKGNI 70
A LR+S L VTEDG KV +I
Sbjct: 82 LAVAEVLRRSSALRVTEDGKKVGRSI 107
>gi|71664881|ref|XP_819416.1| LA RNA binding protein [Trypanosoma cruzi strain CL Brener]
gi|70884717|gb|EAN97565.1| LA RNA binding protein, putative [Trypanosoma cruzi]
Length = 333
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 82/169 (48%), Gaps = 13/169 (7%)
Query: 112 QIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRK 169
++ +EFY SD N++KD F + E+ E + + L N++ T + ++ A+R
Sbjct: 10 KLQRQVEFYFSDVNVQKDVFLKAKMAENAEGFVPLGTLLTFNRVNSATKEVAELAAAIRP 69
Query: 170 SKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLP 229
S+ L ++EDG VRR + + DE T+YV+ LPP A + + FS+YG V V
Sbjct: 70 SEKLVLSEDGLMVRRRDPLPESIQTDEQTVYVKPLPPGATLEELTEFFSQYGTVQAVWRR 129
Query: 230 KF------KSTGKLKGFAFVEFSTKEEAAKALELGLNPCPPDYQSSILT 272
F + + K FV F TKEEA L PP + LT
Sbjct: 130 YFPGKKDAEPEARTKPSVFVVFGTKEEAE-----ALKASPPMHNGVQLT 173
Score = 41.2 bits (95), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 47/85 (55%), Gaps = 6/85 (7%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
+EFY SD N++KD F + E+ E + + L N++ T + ++ A+R S+ L
Sbjct: 15 VEFYFSDVNVQKDVFLKAKMAENAEGFVPLGTLLTFNRVNSATKEVAELAAAIRPSEKLV 74
Query: 59 VTEDGTKVKGNIIRHFLVPISMETE 83
++EDG V+ R +P S++T+
Sbjct: 75 LSEDGLMVR----RRDPLPESIQTD 95
>gi|355699025|gb|AES00992.1| La ribonucleoprotein domain family, member 7 [Mustela putorius
furo]
Length = 86
Score = 75.1 bits (183), Expect = 4e-11, Method: Composition-based stats.
Identities = 36/60 (60%), Positives = 42/60 (70%)
Query: 202 EKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNP 261
E LP H +IE VF K G V Y+S+P +KSTG KGFAFVEF TKE+AAKA+E NP
Sbjct: 1 ELLPKNVNHSWIERVFGKCGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIEFLNNP 60
>gi|320169813|gb|EFW46712.1| sjogren syndrome antigen B [Capsaspora owczarzaki ATCC 30864]
Length = 344
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 82/147 (55%), Gaps = 5/147 (3%)
Query: 109 LYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKA 166
L +I+ +EFY SD+NL +D+F L++E+ + + ++ N+L +LT D + + A
Sbjct: 4 LSAKIVKQVEFYFSDNNLPRDKFLLPLVKETTDGWVPLATLTTFNRLKQLTTDIEAIANA 63
Query: 167 LRK--SKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVT 224
+R+ S + V +GT VRR + D+ D + ++YV+ P + + IE + G +
Sbjct: 64 IREANSTAIAVNAEGTHVRRLAPLLDELDTLKSSVYVKGFPTDYTLEQIEQALAGKGNIK 123
Query: 225 YVSLPKFKSTGKLKGFAFVEFSTKEEA 251
+ + + + KG AF+EF T++EA
Sbjct: 124 AIRMRR-AADKAFKGSAFIEFGTEDEA 149
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 43/71 (60%), Gaps = 4/71 (5%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRK--SKL 56
+EFY SD+NL +D+F L++E+ + + ++ N+L +LT D + + A+R+ S
Sbjct: 12 VEFYFSDNNLPRDKFLLPLVKETTDGWVPLATLTTFNRLKQLTTDIEAIANAIREANSTA 71
Query: 57 LEVTEDGTKVK 67
+ V +GT V+
Sbjct: 72 IAVNAEGTHVR 82
>gi|145546691|ref|XP_001459028.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124426851|emb|CAK91631.1| unnamed protein product [Paramecium tetraurelia]
Length = 313
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 86/167 (51%), Gaps = 17/167 (10%)
Query: 109 LYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE-IEVSVFLKCNKLARLTHD-PDD---- 162
L +I +EFYL D+NL D +F +LLQE+ I + FL+CNK+ + + P
Sbjct: 36 LLPRICKQIEFYLGDANLLHDNYFRRLLQENQGWIPLEAFLQCNKIKVILRNYPKGSKQQ 95
Query: 163 ---VVKALRKSKLLEVTED-GTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFS 218
++ AL++S +LEV ED G RR V + +DE TIYVE +P + + +FS
Sbjct: 96 VLILIYALKRSDILEVDEDRGMVKRRIPFVDNSHFMDERTIYVENIPRVVDQQLLHQIFS 155
Query: 219 KYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNPCPPD 265
+ K + + KF + G F+ F E KA+++ N P +
Sbjct: 156 RIDK-QVLQVKKFDTYG------FITFLNIESVNKAIQVCNNLIPKE 195
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 46/79 (58%), Gaps = 9/79 (11%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE-IEVSVFLKCNKLARLTHD-PDD-------VVKAL 51
+EFYL D+NL D +F +LLQE+ I + FL+CNK+ + + P ++ AL
Sbjct: 44 IEFYLGDANLLHDNYFRRLLQENQGWIPLEAFLQCNKIKVILRNYPKGSKQQVLILIYAL 103
Query: 52 RKSKLLEVTEDGTKVKGNI 70
++S +LEV ED VK I
Sbjct: 104 KRSDILEVDEDRGMVKRRI 122
>gi|242212239|ref|XP_002471954.1| predicted protein [Postia placenta Mad-698-R]
gi|220728975|gb|EED82858.1| predicted protein [Postia placenta Mad-698-R]
Length = 496
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 90/179 (50%), Gaps = 16/179 (8%)
Query: 101 GGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE-----IEVSVFLKCNKLAR 155
GG +++K L M +EFY +DSNL D+F L + E +VS F + +
Sbjct: 62 GGDNKEKML--DAMRQIEFYFADSNLPFDKFMWTLHTANAEHWVPIKQVSSFKRMREYQP 119
Query: 156 LTHDPDDVVKALRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAE--HDYI 213
L + + ALR S+ LEV+EDGT+VRR VQ+ E ++Y + E E +
Sbjct: 120 LGLEW--ITNALRLSEELEVSEDGTQVRRRTEVQEPKGQFERSVYAKGFGAETEGIQKRL 177
Query: 214 ESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNPCP-PDYQSSIL 271
E+ F++YGK V + + +T + KG F EF+ KA+E LN P P + L
Sbjct: 178 EAFFNQYGKTNAVRMRRIDTTKEFKGSVFAEFAD----FKAVEKFLNADPKPSWNGEEL 232
>gi|159483847|ref|XP_001699972.1| predicted protein [Chlamydomonas reinhardtii]
gi|158281914|gb|EDP07668.1| predicted protein [Chlamydomonas reinhardtii]
Length = 511
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 84/160 (52%), Gaps = 18/160 (11%)
Query: 108 QLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVK 165
+L ++ +EFY SD+NL D+ + +++ P+ + V +F K+ L+ D + +
Sbjct: 33 ELLSALVKQVEFYFSDANLPTDKKLLKQIRKDPDGFVPVKLFANFRKVRALSKDVAIITE 92
Query: 166 ALRKSKLLEVTEDGTKVRRTVVVQDK--PDVDECTIYVEKLP--PEAEHDYIESVFSKYG 221
ALR +KLL+++EDG +V+R V V D D+ TI VE LP P + + +F YG
Sbjct: 93 ALRNAKLLQLSEDGKRVKRLVAVPDYDISDIQRRTIVVENLPALPSPTIESVTDMFRMYG 152
Query: 222 KVTYVSLPKFKSTGKLKGF------------AFVEFSTKE 249
+V V + +S GKL + A+VEF +E
Sbjct: 153 RVKLVRICSRESKGKLPSWLTSSCQNMQGQHAYVEFEDEE 192
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 56/100 (56%), Gaps = 17/100 (17%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
+EFY SD+NL D+ + +++ P+ + V +F K+ L+ D + +ALR +KLL+
Sbjct: 42 VEFYFSDANLPTDKKLLKQIRKDPDGFVPVKLFANFRKVRALSKDVAIITEALRNAKLLQ 101
Query: 59 VTEDGTKVKGNIIRHFLVPISMETEASDNVDKDLSDLQRK 98
++EDG +VK R VP D D+SD+QR+
Sbjct: 102 LSEDGKRVK----RLVAVP-----------DYDISDIQRR 126
>gi|148698996|gb|EDL30943.1| mCG13300 [Mus musculus]
Length = 257
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/58 (60%), Positives = 41/58 (70%)
Query: 204 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNP 261
LP H +IE VF K G V Y+S+P +KSTG KGFAFVEF TKE+AAKA+E NP
Sbjct: 5 LPKNVTHSWIERVFGKCGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIEFLNNP 62
>gi|66812540|ref|XP_640449.1| hypothetical protein DDB_G0281835 [Dictyostelium discoideum AX4]
gi|60468473|gb|EAL66477.1| hypothetical protein DDB_G0281835 [Dictyostelium discoideum AX4]
Length = 381
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 93/176 (52%), Gaps = 27/176 (15%)
Query: 113 IMNLMEFYLSDSNLRKDRFFSQLLQESPE---IEVSVFLKCNKLARLTHD----PDDVVK 165
I L+EFY SDSNLRKD+F L+Q + I++S+ L+ K+ + ++ ++ +
Sbjct: 9 IKKLIEFYFSDSNLRKDKFLFNLIQTNQNDGWIDLSIILEFQKIKSVINENSLTEQELEQ 68
Query: 166 ALRKSKLLEVTEDGTKVRRT------VVVQDKPDVDECTIYVEKLPPE-AEHDYIESVFS 218
+ SKLL + +D K++R + + ++DE TIY+E + + + D I +
Sbjct: 69 VFKDSKLLILNQDKNKIKRIEWPIKELTQLEIKEIDEKTIYIEPITNKISTPDLIRKLLL 128
Query: 219 KYGK-----------VTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKAL-ELGLNPC 262
K + ++S+PKF S LKGFAFVEFS K+ A + + + LNP
Sbjct: 129 LEQKIENDNNNNNELIQHISIPKF-SDKTLKGFAFVEFSNKDIANQTIRNIDLNPS 183
Score = 43.9 bits (102), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 44/74 (59%), Gaps = 7/74 (9%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE---IEVSVFLKCNKLARLTHD----PDDVVKALRK 53
+EFY SDSNLRKD+F L+Q + I++S+ L+ K+ + ++ ++ + +
Sbjct: 13 IEFYFSDSNLRKDKFLFNLIQTNQNDGWIDLSIILEFQKIKSVINENSLTEQELEQVFKD 72
Query: 54 SKLLEVTEDGTKVK 67
SKLL + +D K+K
Sbjct: 73 SKLLILNQDKNKIK 86
>gi|212721944|ref|NP_001132618.1| uncharacterized protein LOC100194092 [Zea mays]
gi|194694916|gb|ACF81542.1| unknown [Zea mays]
Length = 448
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 87/170 (51%), Gaps = 22/170 (12%)
Query: 111 QQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTH-----------D 159
+ ++ +EFY SDSNL +D F + ++ES + VS+ L C+ +H
Sbjct: 17 KNVIRQVEFYFSDSNLPRDGFLRRTVEESEDGLVSLALICSFSRMRSHLGLEGDAKPETV 76
Query: 160 PDDVVKA----LRKSKLLEVTEDGTKVRRTVVVQDKPD-----VDECTIYVEKLPPEAEH 210
P++ V A LR+S L V+EDG KV R+ + KPD VD T+ LP +
Sbjct: 77 PEETVLAVADILRRSTALRVSEDGKKVGRSKELS-KPDEVIEQVDSRTVAASPLPYNVKL 135
Query: 211 DYIESVFSKYGKVTYVSLPKFKSTGK-LKGFAFVEFSTKEEAAKALELGL 259
+ +ES F++ GKV V LP+ S + G A VEFS ++EA E L
Sbjct: 136 EEVESFFAQCGKVNSVRLPRHVSDKRHFCGTALVEFSEEDEAKGVFEKNL 185
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 15/81 (18%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTH-----------DPDDVVK 49
+EFY SDSNL +D F + ++ES + VS+ L C+ +H P++ V
Sbjct: 23 VEFYFSDSNLPRDGFLRRTVEESEDGLVSLALICSFSRMRSHLGLEGDAKPETVPEETVL 82
Query: 50 A----LRKSKLLEVTEDGTKV 66
A LR+S L V+EDG KV
Sbjct: 83 AVADILRRSTALRVSEDGKKV 103
>gi|297802732|ref|XP_002869250.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297315086|gb|EFH45509.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 433
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 86/166 (51%), Gaps = 19/166 (11%)
Query: 113 IMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN--------KLARLTHD--PDD 162
++ +EFY SDSNL D F + + ES + VS+ L C+ KL D P+D
Sbjct: 14 VLRQVEFYFSDSNLPIDDFLKKTVTESEDGLVSLALICSFSKMRGYLKLGDSKGDDIPED 73
Query: 163 VVKA----LRKSKLLEVTEDGTKVRRTVVVQDKPDVDEC----TIYVEKLPPEAEHDYIE 214
+KA LR S L+++EDG KV R+ + D+ E T+ + + + +E
Sbjct: 74 TIKAVAATLRTSSALKISEDGKKVGRSTELLKLEDLVEQLNARTVAASPFSYDVKREDVE 133
Query: 215 SVFSKYGKVTYVSLPKFKSTGKL-KGFAFVEFSTKEEAAKALELGL 259
S FS+YGKV V +P+ + ++ G A VEF T+EEA ++ L
Sbjct: 134 SFFSQYGKVNSVRMPRHVAESRIFSGVALVEFPTEEEAQNVMKQNL 179
Score = 43.9 bits (102), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 43/80 (53%), Gaps = 14/80 (17%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN--------KLARLTHD--PDDVVKA 50
+EFY SDSNL D F + + ES + VS+ L C+ KL D P+D +KA
Sbjct: 18 VEFYFSDSNLPIDDFLKKTVTESEDGLVSLALICSFSKMRGYLKLGDSKGDDIPEDTIKA 77
Query: 51 ----LRKSKLLEVTEDGTKV 66
LR S L+++EDG KV
Sbjct: 78 VAATLRTSSALKISEDGKKV 97
>gi|225430017|ref|XP_002284157.1| PREDICTED: uncharacterized protein LOC100250699 [Vitis vinifera]
Length = 475
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 93/173 (53%), Gaps = 21/173 (12%)
Query: 107 KQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTH------DP 160
++ ++++ +EFY SDSNL +D F + + ES + VS+ L C+ +H P
Sbjct: 8 EETVKKVIRQVEFYFSDSNLPRDNFLKKTISESEDGLVSLALICSFSRMRSHLNLGDVKP 67
Query: 161 DD--------VVKALRKSKLLEVTEDGTKVRRTVVVQDKPD-----VDECTIYVEKLPPE 207
+D V + LR S L+V+EDG K+ R + KP+ VD TI L +
Sbjct: 68 EDVSEDTLKAVAEILRNSTTLKVSEDGKKIGRATELL-KPEEVVEQVDIRTIAASPLEYD 126
Query: 208 AEHDYIESVFSKYGKVTYVSLPKFKSTGKL-KGFAFVEFSTKEEAAKALELGL 259
A+ + +E+ F ++ KV V LP+ + ++ G A +E+ST+E+AAK L+ L
Sbjct: 127 AKLEDVEAYFGQFAKVNSVRLPRHVAEKRVFCGTALIEYSTEEDAAKVLQQSL 179
Score = 43.9 bits (102), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 14/80 (17%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTH------DPDD-------- 46
+EFY SDSNL +D F + + ES + VS+ L C+ +H P+D
Sbjct: 18 VEFYFSDSNLPRDNFLKKTISESEDGLVSLALICSFSRMRSHLNLGDVKPEDVSEDTLKA 77
Query: 47 VVKALRKSKLLEVTEDGTKV 66
V + LR S L+V+EDG K+
Sbjct: 78 VAEILRNSTTLKVSEDGKKI 97
>gi|167520600|ref|XP_001744639.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776970|gb|EDQ90588.1| predicted protein [Monosiga brevicollis MX1]
Length = 545
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 65/137 (47%), Gaps = 35/137 (25%)
Query: 111 QQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALR 168
++++ + FY SD+NLR+DRF + P+ + V VFLK N++ +LT D+V+A +
Sbjct: 5 EELIEALRFYFSDANLRRDRFMQAQVNAHPQRYVPVDVFLKFNRVRKLTTSVTDLVEAFQ 64
Query: 169 KSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSL 228
+ + LE+ D T VRR + D D CTIYV
Sbjct: 65 RLEALELNLDHTMVRRKSAIIPSKDTDACTIYV--------------------------- 97
Query: 229 PKFKSTGKLKGFAFVEF 245
G KGFAFVEF
Sbjct: 98 ------GVAKGFAFVEF 108
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
+ FY SD+NLR+DRF + P+ + V VFLK N++ +LT D+V+A ++ + LE
Sbjct: 11 LRFYFSDANLRRDRFMQAQVNAHPQRYVPVDVFLKFNRVRKLTTSVTDLVEAFQRLEALE 70
Query: 59 VTEDGTKVK 67
+ D T V+
Sbjct: 71 LNLDHTMVR 79
>gi|118376506|ref|XP_001021435.1| La domain containing protein [Tetrahymena thermophila]
gi|89303202|gb|EAS01190.1| La domain containing protein [Tetrahymena thermophila SB210]
Length = 2252
Score = 73.9 bits (180), Expect = 7e-11, Method: Composition-based stats.
Identities = 67/307 (21%), Positives = 143/307 (46%), Gaps = 55/307 (17%)
Query: 1 MEFYLSDSNLR---KDRFFSQ------LLQESPEIEVSVFLKCNKLARLTHDPDDVVKAL 51
M+ YL ++NL ++ F + QE+ +++ + + ++ + DV +
Sbjct: 1 MDEYLENTNLEELEQECFMEDYQHEDVVEQENHQVDANDIYENQQMNDESQLNQDVKISQ 60
Query: 52 RKSKLLEVTEDGTKVKGNIIRHFLVPISMETEASDNVDKDLSDLQRKDGGGRHRKKQL-Y 110
+K + +E+ E+ + + + F ++ TE N ++ +L + ++L
Sbjct: 61 QKEQAVEMIEEQQQNNQDKFKQFQDCMAHITEL--NFKRNYQNLTEQSSSNNVVAEELDI 118
Query: 111 QQIMNL-MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDD----- 162
++ + L ME+Y D+NL D + ++ +SP+ +++ VFLK NK+ ++ D
Sbjct: 119 KESLKLQMEYYFCDTNLTHDSYLRGIISKSPKNCVDIKVFLKFNKIQQILKQIQDKQIVS 178
Query: 163 -------------------------------VVKALRKSKLLEVTEDGTKVRRTV---VV 188
+ +L++SK+L+V D KV+R +
Sbjct: 179 TYGIENQSQKKNHKNYKNQNATFSKKDLIHLIRDSLKESKILKVKMDSLKVKRRFPFNLE 238
Query: 189 QDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTK 248
Q + + T+Y++ LPP+ + S+F + ++ ++LP K++ +GFAF+EF ++
Sbjct: 239 QALKNSKQRTLYIDFLPPKCSKQTLVSIFGNF-RIININLPLQKNSQLCQGFAFIEFFSE 297
Query: 249 EEAAKAL 255
EEA +AL
Sbjct: 298 EEANQAL 304
>gi|413918798|gb|AFW58730.1| hypothetical protein ZEAMMB73_444265 [Zea mays]
Length = 448
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 87/170 (51%), Gaps = 22/170 (12%)
Query: 111 QQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTH-----------D 159
+ ++ +EFY SDSNL +D F + ++ES + VS+ L C+ +H
Sbjct: 17 KNVIRQVEFYFSDSNLPRDGFLRRTVEESEDGLVSLALICSFSRMRSHLGLEGDAKPETV 76
Query: 160 PDDVVKA----LRKSKLLEVTEDGTKVRRTVVVQDKPD-----VDECTIYVEKLPPEAEH 210
P++ V A LR+S L V+EDG KV R+ + KPD VD T+ LP +
Sbjct: 77 PEETVLAVADILRRSTALRVSEDGKKVGRSKELS-KPDEVIEQVDSRTVAASPLPYNVKL 135
Query: 211 DYIESVFSKYGKVTYVSLPKFKSTGK-LKGFAFVEFSTKEEAAKALELGL 259
+ +ES F++ GKV V LP+ S + G A VEFS ++EA E L
Sbjct: 136 EEVESFFAQCGKVNSVRLPRHVSDKRHFCGTALVEFSEEDEAKGVFEKNL 185
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 15/81 (18%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTH-----------DPDDVVK 49
+EFY SDSNL +D F + ++ES + VS+ L C+ +H P++ V
Sbjct: 23 VEFYFSDSNLPRDGFLRRTVEESEDGLVSLALICSFSRMRSHLGLEGDAKPETVPEETVL 82
Query: 50 A----LRKSKLLEVTEDGTKV 66
A LR+S L V+EDG KV
Sbjct: 83 AVADILRRSTALRVSEDGKKV 103
>gi|296081884|emb|CBI20889.3| unnamed protein product [Vitis vinifera]
Length = 391
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 91/169 (53%), Gaps = 21/169 (12%)
Query: 111 QQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTH------DPDD-- 162
++++ +EFY SDSNL +D F + + ES + VS+ L C+ +H P+D
Sbjct: 12 KKVIRQVEFYFSDSNLPRDNFLKKTISESEDGLVSLALICSFSRMRSHLNLGDVKPEDVS 71
Query: 163 ------VVKALRKSKLLEVTEDGTKVRRTVVVQDKPD-----VDECTIYVEKLPPEAEHD 211
V + LR S L+V+EDG K+ R + KP+ VD TI L +A+ +
Sbjct: 72 EDTLKAVAEILRNSTTLKVSEDGKKIGRATELL-KPEEVVEQVDIRTIAASPLEYDAKLE 130
Query: 212 YIESVFSKYGKVTYVSLPKFKSTGKL-KGFAFVEFSTKEEAAKALELGL 259
+E+ F ++ KV V LP+ + ++ G A +E+ST+E+AAK L+ L
Sbjct: 131 DVEAYFGQFAKVNSVRLPRHVAEKRVFCGTALIEYSTEEDAAKVLQQSL 179
Score = 43.9 bits (102), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 14/80 (17%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTH------DPDD-------- 46
+EFY SDSNL +D F + + ES + VS+ L C+ +H P+D
Sbjct: 18 VEFYFSDSNLPRDNFLKKTISESEDGLVSLALICSFSRMRSHLNLGDVKPEDVSEDTLKA 77
Query: 47 VVKALRKSKLLEVTEDGTKV 66
V + LR S L+V+EDG K+
Sbjct: 78 VAEILRNSTTLKVSEDGKKI 97
>gi|242065736|ref|XP_002454157.1| hypothetical protein SORBIDRAFT_04g025650 [Sorghum bicolor]
gi|241933988|gb|EES07133.1| hypothetical protein SORBIDRAFT_04g025650 [Sorghum bicolor]
Length = 467
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 88/170 (51%), Gaps = 22/170 (12%)
Query: 111 QQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTH---DPD------ 161
++++ +EFY SDSNL +D+F + +++S + VS+ L C+ +H D D
Sbjct: 15 KKVLRQVEFYFSDSNLPRDKFLRETVEQSDDGLVSLPLICSFSRMKSHLGLDADVKAETL 74
Query: 162 ------DVVKALRKSKLLEVTEDGTKVRRTVVVQDKPD-----VDECTIYVEKLPPEAEH 210
V + LR+S +L V+EDG K+ R + KPD VD TI V LP +
Sbjct: 75 PEETVLAVAEVLRRSPVLRVSEDGKKIGRASELL-KPDEIIEQVDSRTIAVSPLPYNVKL 133
Query: 211 DYIESVFSKYGKVTYVSLPKFKSTGK-LKGFAFVEFSTKEEAAKALELGL 259
+ ++S F+ Y KV V LP+ K G A VEFS +EEA ++ L
Sbjct: 134 EDVQSFFTNYAKVNSVRLPRNIVNKKHFCGTALVEFSEEEEAKSIMDSSL 183
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 15/81 (18%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTH---DPD------------ 45
+EFY SDSNL +D+F + +++S + VS+ L C+ +H D D
Sbjct: 21 VEFYFSDSNLPRDKFLRETVEQSDDGLVSLPLICSFSRMKSHLGLDADVKAETLPEETVL 80
Query: 46 DVVKALRKSKLLEVTEDGTKV 66
V + LR+S +L V+EDG K+
Sbjct: 81 AVAEVLRRSPVLRVSEDGKKI 101
>gi|407844815|gb|EKG02149.1| la RNA binding protein, putative [Trypanosoma cruzi]
Length = 333
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 82/169 (48%), Gaps = 13/169 (7%)
Query: 112 QIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRK 169
++ +EFY SD N++KD F + E+ E + + L N++ T + + +A+R
Sbjct: 10 KLQRQVEFYFSDVNVQKDVFLKAKMAENAEGFVPLGTLLTFNRVNSTTKEVAVLAEAIRP 69
Query: 170 SKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLP 229
S+ L ++EDG VRR + + DE T+YV+ LPP A + + FS+YG V V
Sbjct: 70 SEKLVLSEDGLMVRRRDPLPESIQTDEQTVYVKPLPPGATLEELTEFFSQYGTVQAVWRR 129
Query: 230 KF------KSTGKLKGFAFVEFSTKEEAAKALELGLNPCPPDYQSSILT 272
F + + K FV F TKEEA L PP + LT
Sbjct: 130 YFPGKKDAEPEARTKPSVFVVFGTKEEAE-----ALKASPPMHNGVQLT 173
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 47/85 (55%), Gaps = 6/85 (7%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
+EFY SD N++KD F + E+ E + + L N++ T + + +A+R S+ L
Sbjct: 15 VEFYFSDVNVQKDVFLKAKMAENAEGFVPLGTLLTFNRVNSTTKEVAVLAEAIRPSEKLV 74
Query: 59 VTEDGTKVKGNIIRHFLVPISMETE 83
++EDG V+ R +P S++T+
Sbjct: 75 LSEDGLMVR----RRDPLPESIQTD 95
>gi|6979686|gb|AAF34598.1|AF212865_1 RNA binding protein La-like protein [Trypanosoma brucei]
Length = 335
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 85/177 (48%), Gaps = 13/177 (7%)
Query: 111 QQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALR 168
Q++ +EFY SD N+++D F + E+ E + + L ++ +T D +VV+A+R
Sbjct: 9 QKLQKQVEFYFSDVNVQRDIFLKGKMAENAEGFVSLETLLTFKRVNSVTTDVKEVVEAIR 68
Query: 169 KSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSL 228
S+ L ++EDG VRR + + D T+YV+ +PP A + + FSK+G V V
Sbjct: 69 PSEKLVLSEDGLMVRRRDPLPESIQTDHQTVYVKPVPPTATLEQLTEFFSKHGTVQAVWR 128
Query: 229 PKFKST------GKLKGFAFVEFSTKEEAAKALELGLNPCPPDYQSSILTTTSRLSF 279
F + K FV F++ EEA PP Y LT + ++
Sbjct: 129 RYFAGKKDAPPESRTKPSVFVVFNSSEEAE-----AFQKAPPMYDDVQLTAEMKTTY 180
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 49/85 (57%), Gaps = 6/85 (7%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
+EFY SD N+++D F + E+ E + + L ++ +T D +VV+A+R S+ L
Sbjct: 15 VEFYFSDVNVQRDIFLKGKMAENAEGFVSLETLLTFKRVNSVTTDVKEVVEAIRPSEKLV 74
Query: 59 VTEDGTKVKGNIIRHFLVPISMETE 83
++EDG V+ R +P S++T+
Sbjct: 75 LSEDGLMVR----RRDPLPESIQTD 95
>gi|71746872|ref|XP_822491.1| La protein [Trypanosoma brucei brucei strain 927/4 GUTat10.1]
gi|9501713|emb|CAB99491.1| La protein [Trypanosoma brucei]
gi|70832159|gb|EAN77663.1| La protein [Trypanosoma brucei brucei strain 927/4 GUTat10.1]
Length = 335
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 85/177 (48%), Gaps = 13/177 (7%)
Query: 111 QQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALR 168
Q++ +EFY SD N+++D F + E+ E + + L ++ +T D +VV+A+R
Sbjct: 9 QKLQKQVEFYFSDVNVQRDIFLKGKMAENAEGFVSLETLLTFKRVNSVTTDVKEVVEAIR 68
Query: 169 KSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSL 228
S+ L ++EDG VRR + + D T+YV+ +PP A + + FSK+G V V
Sbjct: 69 PSEKLVLSEDGLMVRRRDPLPESIQTDHQTVYVKPVPPTATLEQLTEFFSKHGTVQAVWR 128
Query: 229 PKFKST------GKLKGFAFVEFSTKEEAAKALELGLNPCPPDYQSSILTTTSRLSF 279
F + K FV F++ EEA PP Y LT + ++
Sbjct: 129 RYFAGKKDAPPESRTKPSVFVVFNSSEEAE-----AFQKAPPMYDDVQLTAEMKTTY 180
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 49/85 (57%), Gaps = 6/85 (7%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
+EFY SD N+++D F + E+ E + + L ++ +T D +VV+A+R S+ L
Sbjct: 15 VEFYFSDVNVQRDIFLKGKMAENAEGFVSLETLLTFKRVNSVTTDVKEVVEAIRPSEKLV 74
Query: 59 VTEDGTKVKGNIIRHFLVPISMETE 83
++EDG V+ R +P S++T+
Sbjct: 75 LSEDGLMVR----RRDPLPESIQTD 95
>gi|326525018|dbj|BAK07779.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 463
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 83/162 (51%), Gaps = 22/162 (13%)
Query: 111 QQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDD-------- 162
+ ++ +EFY SDSNL +D F + ++E+ + VS+ L C+ +H D
Sbjct: 25 KNVLRQVEFYFSDSNLPRDGFLRKTVEENEDGLVSLALICSFAKMRSHLGLDATVKEDGV 84
Query: 163 -------VVKALRKSKLLEVTEDGTKVRRTVVVQDKPD-----VDECTIYVEKLPPEAEH 210
V K LR S L V+EDG +V R + KPD +D +I V LP +
Sbjct: 85 PETTVLAVAKVLRCSSALRVSEDGKRVGRATELL-KPDELIVQIDSRSIAVSPLPYNVKL 143
Query: 211 DYIESVFSKYGKVTYVSLPKFKSTGK-LKGFAFVEFSTKEEA 251
+ ++S F++YGKV V LPK S + G A VEFS ++EA
Sbjct: 144 EDVQSFFAQYGKVNSVRLPKHVSDKRHFCGTALVEFSEEDEA 185
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 15/81 (18%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDD-------------- 46
+EFY SDSNL +D F + ++E+ + VS+ L C+ +H D
Sbjct: 31 VEFYFSDSNLPRDGFLRKTVEENEDGLVSLALICSFAKMRSHLGLDATVKEDGVPETTVL 90
Query: 47 -VVKALRKSKLLEVTEDGTKV 66
V K LR S L V+EDG +V
Sbjct: 91 AVAKVLRCSSALRVSEDGKRV 111
>gi|261332208|emb|CBH15202.1| La protein [Trypanosoma brucei gambiense DAL972]
Length = 335
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 85/177 (48%), Gaps = 13/177 (7%)
Query: 111 QQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALR 168
Q++ +EFY SD N+++D F + E+ E + + L ++ +T D +VV+A+R
Sbjct: 9 QKLQKQVEFYFSDVNVQRDIFLKGKMAENAEGFVSLETLLTFKRVNSVTTDVKEVVEAIR 68
Query: 169 KSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSL 228
S+ L ++EDG VRR + + D T+YV+ +PP A + + FSK+G V V
Sbjct: 69 PSEKLVLSEDGLMVRRRDPLPESIQTDHQTVYVKPVPPTATLEQLTEFFSKHGTVQAVWR 128
Query: 229 PKFKST------GKLKGFAFVEFSTKEEAAKALELGLNPCPPDYQSSILTTTSRLSF 279
F + K FV F++ EEA PP Y LT + ++
Sbjct: 129 RYFAGKKDAPPESRTKPSVFVVFNSSEEAE-----AFQKAPPMYDDVQLTAEMKTTY 180
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 49/85 (57%), Gaps = 6/85 (7%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
+EFY SD N+++D F + E+ E + + L ++ +T D +VV+A+R S+ L
Sbjct: 15 VEFYFSDVNVQRDIFLKGKMAENAEGFVSLETLLTFKRVNSVTTDVKEVVEAIRPSEKLV 74
Query: 59 VTEDGTKVKGNIIRHFLVPISMETE 83
++EDG V+ R +P S++T+
Sbjct: 75 LSEDGLMVR----RRDPLPESIQTD 95
>gi|326507354|dbj|BAJ95752.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 463
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 83/162 (51%), Gaps = 22/162 (13%)
Query: 111 QQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDD-------- 162
+ ++ +EFY SDSNL +D F + ++E+ + VS+ L C+ +H D
Sbjct: 25 KNVLRQVEFYFSDSNLPRDGFLRKTVEENEDGLVSLALICSFAKMRSHLGLDATVKEDGV 84
Query: 163 -------VVKALRKSKLLEVTEDGTKVRRTVVVQDKPD-----VDECTIYVEKLPPEAEH 210
V K LR S L V+EDG +V R + KPD +D +I V LP +
Sbjct: 85 PETTVLAVAKVLRCSSALRVSEDGKRVGRATELL-KPDELIVQIDSRSIAVSPLPYNVKL 143
Query: 211 DYIESVFSKYGKVTYVSLPKFKSTGK-LKGFAFVEFSTKEEA 251
+ ++S F++YGKV V LPK S + G A VEFS ++EA
Sbjct: 144 EDVQSFFAQYGKVNSVRLPKHVSDKRHFCGTALVEFSEEDEA 185
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 15/81 (18%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDD-------------- 46
+EFY SDSNL +D F + ++E+ + VS+ L C+ +H D
Sbjct: 31 VEFYFSDSNLPRDGFLRKTVEENEDGLVSLALICSFAKMRSHLGLDATVKEDGVPETTVL 90
Query: 47 -VVKALRKSKLLEVTEDGTKV 66
V K LR S L V+EDG +V
Sbjct: 91 AVAKVLRCSSALRVSEDGKRV 111
>gi|357164485|ref|XP_003580069.1| PREDICTED: uncharacterized protein LOC100820966 [Brachypodium
distachyon]
Length = 445
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 86/168 (51%), Gaps = 22/168 (13%)
Query: 113 IMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTH-----------DPD 161
++ +EFY SDSNL +D F + ++ES + VS+ L C+ +H P+
Sbjct: 18 VLRQVEFYFSDSNLPRDGFLRKTVEESEDGLVSLALICSFAKMRSHLGLDATVKEDSVPE 77
Query: 162 D----VVKALRKSKLLEVTEDGTKVRRTVVVQDKPD-----VDECTIYVEKLPPEAEHDY 212
+ V K LR S L V+EDG KV R + KPD VD ++ LP + +
Sbjct: 78 NTVLAVAKVLRCSSALRVSEDGKKVGRANELL-KPDEIIEQVDSRSVAASPLPYNVKLED 136
Query: 213 IESVFSKYGKVTYVSLPKFKSTGK-LKGFAFVEFSTKEEAAKALELGL 259
++S F++YGKV V LPK + + G A VEFS +EEA ++ L
Sbjct: 137 VQSFFAQYGKVNSVRLPKHVADKRHFCGTALVEFSEEEEANGVMKNNL 184
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 42/81 (51%), Gaps = 15/81 (18%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTH-----------DPDD--- 46
+EFY SDSNL +D F + ++ES + VS+ L C+ +H P++
Sbjct: 22 VEFYFSDSNLPRDGFLRKTVEESEDGLVSLALICSFAKMRSHLGLDATVKEDSVPENTVL 81
Query: 47 -VVKALRKSKLLEVTEDGTKV 66
V K LR S L V+EDG KV
Sbjct: 82 AVAKVLRCSSALRVSEDGKKV 102
>gi|242076366|ref|XP_002448119.1| hypothetical protein SORBIDRAFT_06g021470 [Sorghum bicolor]
gi|241939302|gb|EES12447.1| hypothetical protein SORBIDRAFT_06g021470 [Sorghum bicolor]
Length = 447
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 86/178 (48%), Gaps = 22/178 (12%)
Query: 111 QQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTH-------DPDD- 162
+ ++ +EFY SDSNL +D F + ++ES VS+ L C+ +H PD
Sbjct: 16 KNVIRQVEFYFSDSNLPRDGFLRRTVEESENGLVSLALICSFSRMRSHLGLEGDVKPDTV 75
Query: 163 -------VVKALRKSKLLEVTEDGTKVRRTVVVQDKPD-----VDECTIYVEKLPPEAEH 210
V LR+S L V+EDG KV R+ + KPD VD T+ LP +
Sbjct: 76 PEETVLAVADVLRRSTALRVSEDGKKVGRSKELL-KPDEVIDQVDSRTVAASPLPYNVKL 134
Query: 211 DYIESVFSKYGKVTYVSLPKFKSTGK-LKGFAFVEFSTKEEAAKALELGLNPCPPDYQ 267
+ +ES F++ GKV V LP+ S + G A VEFS ++EA E L D Q
Sbjct: 135 EEVESFFAQCGKVNSVRLPRHVSDKRHFCGTALVEFSDEDEAKGVFEKKLVFAGADLQ 192
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 40/81 (49%), Gaps = 15/81 (18%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTH-------DPDD------- 46
+EFY SDSNL +D F + ++ES VS+ L C+ +H PD
Sbjct: 22 VEFYFSDSNLPRDGFLRRTVEESENGLVSLALICSFSRMRSHLGLEGDVKPDTVPEETVL 81
Query: 47 -VVKALRKSKLLEVTEDGTKV 66
V LR+S L V+EDG KV
Sbjct: 82 AVADVLRRSTALRVSEDGKKV 102
>gi|297668813|ref|XP_002812618.1| PREDICTED: lupus La protein-like [Pongo abelii]
Length = 185
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 88/168 (52%), Gaps = 11/168 (6%)
Query: 99 DGGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFF-SQLLQESPEIEVSVFLKCNKLARLT 157
+ G + L +I + +E+Y D NL +D+F Q+ + + + + +K N+L RLT
Sbjct: 3 ENGDNEKMAALEAKICHQIEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLT 62
Query: 158 HDPDDVVKALRKSK--LLEVTEDGTKVRRT-------VVVQDKPDVDECTIYVEKLPPEA 208
D + +V+AL KSK L+E++ED TK+RR+ V + K DV ++Y++ P +A
Sbjct: 63 TDFNVIVEALSKSKAELMEISEDKTKIRRSPSKPLPEVTDEYKNDVKNRSVYIKGFPTDA 122
Query: 209 EHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
D I+ G+V + + + KG FV F + E A K +E
Sbjct: 123 TLDDIKEWLEDKGQVLNIQMRRTLHKA-FKGSIFVVFDSIESAKKFVE 169
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 46/70 (65%), Gaps = 3/70 (4%)
Query: 1 MEFYLSDSNLRKDRFF-SQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--LL 57
+E+Y D NL +D+F Q+ + + + + +K N+L RLT D + +V+AL KSK L+
Sbjct: 21 IEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLTTDFNVIVEALSKSKAELM 80
Query: 58 EVTEDGTKVK 67
E++ED TK++
Sbjct: 81 EISEDKTKIR 90
>gi|187609149|pdb|2VOD|A Chain A, Crystal Structure Of N-Terminal Domains Of Human La
Protein Complexed With Rna Oligomer Auauuuu
gi|187609150|pdb|2VOD|B Chain B, Crystal Structure Of N-Terminal Domains Of Human La
Protein Complexed With Rna Oligomer Auauuuu
gi|187609153|pdb|2VON|A Chain A, Crystal Structure Of N-Terminal Domains Of Human La
Protein Complexed With Rna Oligomer Auaauuu
gi|187609154|pdb|2VON|B Chain B, Crystal Structure Of N-Terminal Domains Of Human La
Protein Complexed With Rna Oligomer Auaauuu
gi|187609157|pdb|2VOO|A Chain A, Crystal Structure Of N-Terminal Domains Of Human La
Protein Complexed With Rna Oligomer Uuuuuuuu
gi|187609158|pdb|2VOO|B Chain B, Crystal Structure Of N-Terminal Domains Of Human La
Protein Complexed With Rna Oligomer Uuuuuuuu
gi|187609161|pdb|2VOP|A Chain A, Crystal Structure Of N-Terminal Domains Of Human La
Protein Complexed With Rna Oligomer Auuuu
Length = 193
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 88/167 (52%), Gaps = 11/167 (6%)
Query: 100 GGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTH 158
G + L +I + +E+Y D NL +D+F + ++ + + + + +K N+L RLT
Sbjct: 3 NGDNEKMAALEAKICHQIEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLTT 62
Query: 159 DPDDVVKALRKSK--LLEVTEDGTKVRRT-------VVVQDKPDVDECTIYVEKLPPEAE 209
D + +V+AL KSK L+E++ED TK+RR+ V + K DV ++Y++ P +A
Sbjct: 63 DFNVIVEALSKSKAELMEISEDKTKIRRSPSKPLPEVTDEYKNDVKNRSVYIKGFPTDAT 122
Query: 210 HDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
D I+ G+V + + + KG FV F + E A K +E
Sbjct: 123 LDDIKEWLEDKGQVLNIQMRRTLHKA-FKGSIFVVFDSIESAKKFVE 168
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 47/70 (67%), Gaps = 3/70 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--LL 57
+E+Y D NL +D+F + ++ + + + + +K N+L RLT D + +V+AL KSK L+
Sbjct: 20 IEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLTTDFNVIVEALSKSKAELM 79
Query: 58 EVTEDGTKVK 67
E++ED TK++
Sbjct: 80 EISEDKTKIR 89
>gi|441675980|ref|XP_003272651.2| PREDICTED: la-related protein 7-like [Nomascus leucogenys]
Length = 310
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 41/60 (68%)
Query: 202 EKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNP 261
E LP H +IE VF K G V Y+S+P +KS G KGFAFVEF TKE+AAKA+E NP
Sbjct: 31 ELLPKNVNHSWIERVFGKCGNVFYISIPHYKSIGDPKGFAFVEFETKEQAAKAIEFLNNP 90
>gi|342183956|emb|CCC93437.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 328
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 81/176 (46%), Gaps = 17/176 (9%)
Query: 106 KKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDV 163
+K+L +Q+ EFY SD NL KD F + E+PE + + L N++ +T D +
Sbjct: 8 QKKLQKQV----EFYFSDVNLHKDIFMKGKMAENPEGFVSMETLLTFNRVNSVTKDAKVL 63
Query: 164 VKALRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKV 223
A+R S+ L ++ D VRR + + D T+YV+ LPP A + + F KYG V
Sbjct: 64 ADAIRPSEKLVLSGDDLMVRRREPLPETIQTDPLTVYVKPLPPTATLEQLTEFFGKYGTV 123
Query: 224 TYVSLPKFKST------GKLKGFAFVEFSTKEEAAKALELGLNPCPPDYQSSILTT 273
V F + K FV F T EA + PP+Y+ LT
Sbjct: 124 QAVWRRYFAGKKDAPPESRTKPSVFVVFGTSNEAEE-----FQKAPPEYEGVQLTA 174
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
+EFY SD NL KD F + E+PE + + L N++ +T D + A+R S+ L
Sbjct: 15 VEFYFSDVNLHKDIFMKGKMAENPEGFVSMETLLTFNRVNSVTKDAKVLADAIRPSEKLV 74
Query: 59 VTEDGTKVK 67
++ D V+
Sbjct: 75 LSGDDLMVR 83
>gi|149639518|ref|XP_001514775.1| PREDICTED: lupus La protein [Ornithorhynchus anatinus]
Length = 405
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 89/161 (55%), Gaps = 15/161 (9%)
Query: 109 LYQQIMNLMEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKAL 167
L +I + +E+Y D NL +D+F + ++ + I + +K N+L+RLT D + +V+AL
Sbjct: 13 LENKICHQIEYYFGDFNLPRDKFLKEQIKLDDGWIPLETMIKFNRLSRLTTDFNVIVEAL 72
Query: 168 RKSK--LLEVTEDGTKVRRT-------VVVQDKPDVDECTIYVEKLPPEAEHDYIESVFS 218
+KSK L+E++ED TK+RR+ V + K D+ +IYV+ P +A D I+
Sbjct: 73 KKSKAELMEISEDKTKIRRSPNKPLPEVTDEYKNDIKNRSIYVKGFPTDATLDDIKEWLE 132
Query: 219 KYGKVTYVSLPK--FKSTGKLKGFAFVEFSTKEEAAKALEL 257
G+V + + + KS KG F F + E A K +E+
Sbjct: 133 GKGQVQNIQMRRTLHKS---FKGSIFAVFDSVESAKKFVEV 170
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 48/70 (68%), Gaps = 3/70 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--LL 57
+E+Y D NL +D+F + ++ + I + +K N+L+RLT D + +V+AL+KSK L+
Sbjct: 21 IEYYFGDFNLPRDKFLKEQIKLDDGWIPLETMIKFNRLSRLTTDFNVIVEALKKSKAELM 80
Query: 58 EVTEDGTKVK 67
E++ED TK++
Sbjct: 81 EISEDKTKIR 90
>gi|147819226|emb|CAN66913.1| hypothetical protein VITISV_007260 [Vitis vinifera]
Length = 475
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 93/173 (53%), Gaps = 21/173 (12%)
Query: 107 KQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTH------DP 160
++ ++++ +EFY SDSNL +D F + + ES + VS+ L C+ +H P
Sbjct: 8 EETVKKVIRQVEFYFSDSNLPRDNFLKKTISESEDGLVSLALICSFSRMRSHLNLGDVKP 67
Query: 161 DD--------VVKALRKSKLLEVTEDGTKVRRTVVVQDKPD-----VDECTIYVEKLPPE 207
+D V + LR S L+V+EDG K+ R + KP+ V+ TI L +
Sbjct: 68 EDVSEDTLKAVAEILRNSTTLKVSEDGKKIGRATELL-KPEEVVEQVNIRTIAASPLEYD 126
Query: 208 AEHDYIESVFSKYGKVTYVSLPKFKSTGKL-KGFAFVEFSTKEEAAKALELGL 259
A+ + +E+ F ++ KV V LP+ + ++ G A +E+ST+E+AAK L+ L
Sbjct: 127 AKLEDVEAYFGQFAKVNSVRLPRHVAEKRVFCGTALIEYSTEEDAAKVLQQSL 179
Score = 43.9 bits (102), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 14/80 (17%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTH------DPDD-------- 46
+EFY SDSNL +D F + + ES + VS+ L C+ +H P+D
Sbjct: 18 VEFYFSDSNLPRDNFLKKTISESEDGLVSLALICSFSRMRSHLNLGDVKPEDVSEDTLKA 77
Query: 47 VVKALRKSKLLEVTEDGTKV 66
V + LR S L+V+EDG K+
Sbjct: 78 VAEILRNSTTLKVSEDGKKI 97
>gi|159478104|ref|XP_001697144.1| RNA binding protein [Chlamydomonas reinhardtii]
gi|158274618|gb|EDP00399.1| RNA binding protein [Chlamydomonas reinhardtii]
Length = 434
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 81/165 (49%), Gaps = 18/165 (10%)
Query: 109 LYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKC------NKLARLTHDPD- 161
L +++ +EFY SDSNL KD+F + + E P V + + C + + + PD
Sbjct: 9 LKGKVVRQIEFYFSDSNLPKDKFLKERIAEDPNGFVPLNVICAFQRMRDLIGVKSQSPDA 68
Query: 162 -------DVVKALRKSKLLEVTEDGTKVRRTVVVQDKPD----VDECTIYVEKLPPEAEH 210
V +AL S+ LEV E TKV+R + + + VD ++Y P +A
Sbjct: 69 VPADKLQQVAEALAGSESLEVDESKTKVKRKQPLAPEAEIAKAVDARSLYARPFPMDATV 128
Query: 211 DYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKAL 255
D I +F+ +G V V + + + KG FVEFS+ EEA K L
Sbjct: 129 DTITELFNGHGTVNCVRMRRHVRSKMFKGSVFVEFSSVEEAEKVL 173
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 48/103 (46%), Gaps = 20/103 (19%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKC------NKLARLTHDPD--------D 46
+EFY SDSNL KD+F + + E P V + + C + + + PD
Sbjct: 17 IEFYFSDSNLPKDKFLKERIAEDPNGFVPLNVICAFQRMRDLIGVKSQSPDAVPADKLQQ 76
Query: 47 VVKALRKSKLLEVTEDGTKVKGNIIRHFLVPISMETEASDNVD 89
V +AL S+ LEV E TKVK P++ E E + VD
Sbjct: 77 VAEALAGSESLEVDESKTKVKRK------QPLAPEAEIAKAVD 113
>gi|388583438|gb|EIM23740.1| hypothetical protein WALSEDRAFT_42953 [Wallemia sebi CBS 633.66]
Length = 377
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 93/190 (48%), Gaps = 24/190 (12%)
Query: 112 QIMNLMEFYLSDSNLRKDRFFSQLLQESPE-----IEVSVFLKCNKLARLTHDPDDVVKA 166
QI+ +EFY +D+NL D+F L +++PE +S F + + + V +
Sbjct: 12 QILKQVEFYFADTNLPFDKFLWSLTKKNPEGYVPIATISSFKRMREPVEKAGGVEKVAEI 71
Query: 167 LRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYI--ESVFSKYGKVT 224
LR+S L V+EDG V+R V+ D + +IY + P E+E+ + E F+ +GK+
Sbjct: 72 LRQSDKLAVSEDGVNVKRVEQVKPVVDRESRSIYAKGFPDESENTQVELEKYFAAFGKIN 131
Query: 225 YVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNPCPPD---YQSSILTTTSRLSF-- 279
V L + K K FVEF ++A + LEL P + Y + L T S+ ++
Sbjct: 132 AVRLRR-DEKKKFKNSVFVEFDNVDDAKRFLEL-----PQEQRKYGETELLTMSKEAYVE 185
Query: 280 ------GITP 283
GITP
Sbjct: 186 MKCKEKGITP 195
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 5/72 (6%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE-----IEVSVFLKCNKLARLTHDPDDVVKALRKSK 55
+EFY +D+NL D+F L +++PE +S F + + + V + LR+S
Sbjct: 17 VEFYFADTNLPFDKFLWSLTKKNPEGYVPIATISSFKRMREPVEKAGGVEKVAEILRQSD 76
Query: 56 LLEVTEDGTKVK 67
L V+EDG VK
Sbjct: 77 KLAVSEDGVNVK 88
>gi|297264270|ref|XP_002808052.1| PREDICTED: LOW QUALITY PROTEIN: lupus La protein-like [Macaca
mulatta]
Length = 423
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 89/168 (52%), Gaps = 11/168 (6%)
Query: 99 DGGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLT 157
+ G + L +I + +E+Y D NL +D+F + ++ + + + + +K N+L RLT
Sbjct: 31 ENGDNEKMAALEAKICHQIEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLT 90
Query: 158 HDPDDVVKALRKSK--LLEVTEDGTKVRRT-------VVVQDKPDVDECTIYVEKLPPEA 208
D + +V+AL KSK L+E++ED TK+RR+ V + K DV ++Y++ P +A
Sbjct: 91 TDFNVIVEALSKSKAELMEISEDKTKIRRSPSKPLPEVTDEYKNDVKNRSVYIKGFPTDA 150
Query: 209 EHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
D I+ G+V + + + KG FV F + E A K +E
Sbjct: 151 TLDDIKEWLEDKGQVLNIQMRRTLHKA-FKGSIFVVFDSIESAKKFVE 197
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 47/70 (67%), Gaps = 3/70 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--LL 57
+E+Y D NL +D+F + ++ + + + + +K N+L RLT D + +V+AL KSK L+
Sbjct: 49 IEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLTTDFNVIVEALSKSKAELM 108
Query: 58 EVTEDGTKVK 67
E++ED TK++
Sbjct: 109 EISEDKTKIR 118
>gi|350592276|ref|XP_003359081.2| PREDICTED: la-related protein 7-like [Sus scrofa]
Length = 288
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALEL 257
++YVE LP H + E VF K V Y+S+P++KSTG KGFAFV+F TK +AAKAL+
Sbjct: 34 SLYVELLPKNVNHSWTERVFGKCENVAYISIPRYKSTGDPKGFAFVKFETKAQAAKALQF 93
Query: 258 GLNPCP 263
LN P
Sbjct: 94 -LNNLP 98
>gi|255583557|ref|XP_002532535.1| lupus la ribonucleoprotein, putative [Ricinus communis]
gi|223527747|gb|EEF29851.1| lupus la ribonucleoprotein, putative [Ricinus communis]
Length = 270
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 81/152 (53%), Gaps = 10/152 (6%)
Query: 83 EASDNVDKDLSDLQRKDGGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE- 141
E +V+ DL Q + G R + L +I+ +E+Y SD NL D+ L++++ E
Sbjct: 52 EEDADVEHDLD--QDQHPGPADRTEVLKAKIVKQVEYYFSDENLPTDKHMIGLIKKNKEG 109
Query: 142 -IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEVTEDGTKVRR----TVVVQDKPDVDE 196
+ +++F K+ +LT D +V ALR+S L V+ DG KV+R V P +
Sbjct: 110 FVPITIFASFRKMKKLTRDHSVIVAALRESSFLVVSSDGKKVKRLHPFPVAAIKDPKL-- 167
Query: 197 CTIYVEKLPPEAEHDYIESVFSKYGKVTYVSL 228
CT+ VE LP + + I +F + GK+ ++S+
Sbjct: 168 CTVLVENLPEDHSVENIRRIFGEAGKIKHISI 199
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
+E+Y SD NL D+ L++++ E + +++F K+ +LT D +V ALR+S L
Sbjct: 84 VEYYFSDENLPTDKHMIGLIKKNKEGFVPITIFASFRKMKKLTRDHSVIVAALRESSFLV 143
Query: 59 VTEDGTKVK 67
V+ DG KVK
Sbjct: 144 VSSDGKKVK 152
>gi|340379637|ref|XP_003388333.1| PREDICTED: lupus La protein-like [Amphimedon queenslandica]
Length = 348
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 94/185 (50%), Gaps = 18/185 (9%)
Query: 109 LYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKA 166
L ++I+ +EFY D NL +D+F ++E+ + +E+SV L ++L L+ D + A
Sbjct: 22 LEKKIIRQIEFYFGDRNLSRDKFLQNKIKENEDGWVELSVLLTFSRLKALSTDCSLIAGA 81
Query: 167 LRKSK--LLEVTEDGTKVRRT----------VVVQDKPDVDECTIYVEKLPPEAEHDYIE 214
LRKS LLEV+EDG KV+R + +D+ D+ T+Y++ P ++ D I+
Sbjct: 82 LRKSTSGLLEVSEDGLKVKRKSSDPVPTLSLLSPEDRKDMSNRTLYMKGFPKDSTLDDIQ 141
Query: 215 SVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNPCPPDYQSSILTTT 274
+G+ + + K + KG FVE+ + +K LE Y+ +LT
Sbjct: 142 DFLLPFGETEMIRMKK-DLDKQFKGSIFVEYKLVDSISKVLE---KKAELKYKDELLTVE 197
Query: 275 SRLSF 279
++ +
Sbjct: 198 TKQDY 202
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSK--L 56
+EFY D NL +D+F ++E+ + +E+SV L ++L L+ D + ALRKS L
Sbjct: 30 IEFYFGDRNLSRDKFLQNKIKENEDGWVELSVLLTFSRLKALSTDCSLIAGALRKSTSGL 89
Query: 57 LEVTEDGTKVK 67
LEV+EDG KVK
Sbjct: 90 LEVSEDGLKVK 100
>gi|224092324|ref|XP_002309558.1| predicted protein [Populus trichocarpa]
gi|222855534|gb|EEE93081.1| predicted protein [Populus trichocarpa]
Length = 191
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 91/169 (53%), Gaps = 21/169 (12%)
Query: 111 QQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN--------KLARLTHD--P 160
++++ +EFY SDSN+ +D F ++ S + VS+ L C+ KL + + P
Sbjct: 12 KEVLRQVEFYFSDSNIPRDNFLRNTIESSEDGLVSLALICSFKKMKGYLKLMDVKPEEIP 71
Query: 161 DDVVKA----LRKSKLLEVTEDGTKVRRTVVVQDKPD-----VDECTIYVEKLPPEAEHD 211
+ V+A LRKS L+V+EDG KV R + KPD +D T+ V L A+ +
Sbjct: 72 EPTVQAVAETLRKSTSLKVSEDGKKVGRMAALL-KPDEAIEQLDVRTVAVSPLKYNAKRE 130
Query: 212 YIESVFSKYGKVTYVSLPKFKSTGKL-KGFAFVEFSTKEEAAKALELGL 259
+ES F ++ KVT V +P+ ++ G A +EFS++E+A K L L
Sbjct: 131 ELESFFGQHAKVTSVRMPRHVGDKRVFCGTALIEFSSEEDAEKILNQSL 179
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 14/80 (17%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN--------KLARLTHD--PDDVVKA 50
+EFY SDSN+ +D F ++ S + VS+ L C+ KL + + P+ V+A
Sbjct: 18 VEFYFSDSNIPRDNFLRNTIESSEDGLVSLALICSFKKMKGYLKLMDVKPEEIPEPTVQA 77
Query: 51 ----LRKSKLLEVTEDGTKV 66
LRKS L+V+EDG KV
Sbjct: 78 VAETLRKSTSLKVSEDGKKV 97
>gi|332210378|ref|XP_003254284.1| PREDICTED: lupus La protein isoform 2 [Nomascus leucogenys]
Length = 434
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 89/168 (52%), Gaps = 11/168 (6%)
Query: 99 DGGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLT 157
+ G + L +I + +E+Y D NL +D+F + ++ + + + + +K N+L RLT
Sbjct: 32 ENGDNEKMAALEAKICHQIEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLT 91
Query: 158 HDPDDVVKALRKSK--LLEVTEDGTKVRRT-------VVVQDKPDVDECTIYVEKLPPEA 208
D + +V+AL KSK L+E++ED TK+RR+ V + K DV ++Y++ P +A
Sbjct: 92 TDFNVIVEALSKSKAELMEISEDKTKIRRSPSKPLPEVTDEYKNDVKNRSVYIKGFPTDA 151
Query: 209 EHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
D I+ G+V + + + KG FV F + E A K +E
Sbjct: 152 TLDDIKEWLEDKGQVLNIQMRRTLHKA-FKGSIFVVFDSIESAKKFVE 198
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 47/70 (67%), Gaps = 3/70 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--LL 57
+E+Y D NL +D+F + ++ + + + + +K N+L RLT D + +V+AL KSK L+
Sbjct: 50 IEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLTTDFNVIVEALSKSKAELM 109
Query: 58 EVTEDGTKVK 67
E++ED TK++
Sbjct: 110 EISEDKTKIR 119
>gi|79326195|ref|NP_001031777.1| La protein 1 [Arabidopsis thaliana]
gi|332660710|gb|AEE86110.1| La protein 1 [Arabidopsis thaliana]
Length = 404
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 86/166 (51%), Gaps = 19/166 (11%)
Query: 113 IMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN--------KLARLTHD--PDD 162
++ +EFY SDSNL D F + + ES + VS+ L C+ KL D P+D
Sbjct: 14 VLRQVEFYFSDSNLPIDDFLKKTVTESEDGLVSLALICSFSKMRGYLKLGDSKGDDIPED 73
Query: 163 VVKA----LRKSKLLEVTEDGTKVRRTVVVQDKPDVDEC----TIYVEKLPPEAEHDYIE 214
+KA LR S L++++DG KV R+ + D+ E T+ + + + +E
Sbjct: 74 TIKAVADTLRTSSALKISDDGKKVGRSTELLKLEDLIEQLNARTVAASPFSYDVKREDVE 133
Query: 215 SVFSKYGKVTYVSLPKFKSTGKL-KGFAFVEFSTKEEAAKALELGL 259
S FS+YGKV V +P+ + ++ G A VEF T+E+A ++ L
Sbjct: 134 SFFSQYGKVNSVRMPRHVAESRIFSGVALVEFPTEEDAQNVMKQNL 179
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 43/80 (53%), Gaps = 14/80 (17%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN--------KLARLTHD--PDDVVKA 50
+EFY SDSNL D F + + ES + VS+ L C+ KL D P+D +KA
Sbjct: 18 VEFYFSDSNLPIDDFLKKTVTESEDGLVSLALICSFSKMRGYLKLGDSKGDDIPEDTIKA 77
Query: 51 ----LRKSKLLEVTEDGTKV 66
LR S L++++DG KV
Sbjct: 78 VADTLRTSSALKISDDGKKV 97
>gi|326497945|dbj|BAJ94835.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 465
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 80/156 (51%), Gaps = 22/156 (14%)
Query: 117 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDD-------------- 162
+EFY SDSNL +D F + ++E+ + VS+ L C+ +H D
Sbjct: 33 VEFYFSDSNLPRDGFLRKTVEENEDGLVSLALICSFAKMRSHLGLDATVKEDGVPETTVL 92
Query: 163 -VVKALRKSKLLEVTEDGTKVRRTVVVQDKPD-----VDECTIYVEKLPPEAEHDYIESV 216
V K LR S L V+EDG +V R + KPD +D +I V LP + + ++S
Sbjct: 93 AVAKVLRCSSALRVSEDGKRVGRATELL-KPDELIVQIDSRSIAVSPLPYNVKLEDVQSF 151
Query: 217 FSKYGKVTYVSLPKFKSTGK-LKGFAFVEFSTKEEA 251
F++YGKV V LPK S + G A VEFS ++EA
Sbjct: 152 FAQYGKVNSVRLPKHVSDKRHFCGTALVEFSEEDEA 187
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 15/81 (18%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDD-------------- 46
+EFY SDSNL +D F + ++E+ + VS+ L C+ +H D
Sbjct: 33 VEFYFSDSNLPRDGFLRKTVEENEDGLVSLALICSFAKMRSHLGLDATVKEDGVPETTVL 92
Query: 47 -VVKALRKSKLLEVTEDGTKV 66
V K LR S L V+EDG +V
Sbjct: 93 AVAKVLRCSSALRVSEDGKRV 113
>gi|22530928|gb|AAM96968.1| putative protein [Arabidopsis thaliana]
gi|23198376|gb|AAN15715.1| putative protein [Arabidopsis thaliana]
Length = 433
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 86/166 (51%), Gaps = 19/166 (11%)
Query: 113 IMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN--------KLARLTHD--PDD 162
++ +EFY SDSNL D F + + ES + VS+ L C+ KL D P+D
Sbjct: 14 VLRQVEFYFSDSNLPIDDFLKKTVTESEDGLVSLALICSFSKMRGYLKLGDSKGDDIPED 73
Query: 163 VVKA----LRKSKLLEVTEDGTKVRRTVVVQDKPDVDEC----TIYVEKLPPEAEHDYIE 214
+KA LR S L++++DG KV R+ + D+ E T+ + + + +E
Sbjct: 74 TIKAVADTLRTSSALKISDDGKKVGRSTELLKLEDLIEQLNARTVAASPFSYDVKREDVE 133
Query: 215 SVFSKYGKVTYVSLPKFKSTGKL-KGFAFVEFSTKEEAAKALELGL 259
S FS+YGKV V +P+ + ++ G A VEF T+E+A ++ L
Sbjct: 134 SFFSQYGKVNSVRMPRHVAESRIFSGVALVEFPTEEDAQNVMKQNL 179
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 43/80 (53%), Gaps = 14/80 (17%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN--------KLARLTHD--PDDVVKA 50
+EFY SDSNL D F + + ES + VS+ L C+ KL D P+D +KA
Sbjct: 18 VEFYFSDSNLPIDDFLKKTVTESEDGLVSLALICSFSKMRGYLKLGDSKGDDIPEDTIKA 77
Query: 51 ----LRKSKLLEVTEDGTKV 66
LR S L++++DG KV
Sbjct: 78 VADTLRTSSALKISDDGKKV 97
>gi|302828986|ref|XP_002946060.1| hypothetical protein VOLCADRAFT_120167 [Volvox carteri f.
nagariensis]
gi|300268875|gb|EFJ53055.1| hypothetical protein VOLCADRAFT_120167 [Volvox carteri f.
nagariensis]
Length = 446
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 92/186 (49%), Gaps = 23/186 (12%)
Query: 112 QIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARL----THDP----- 160
+++ +EFY SDSNL KD+F + + E PE ++++V + ++ + + DP
Sbjct: 11 KVLRQVEFYFSDSNLPKDKFLKERMAEDPEGYVKLNVIIAFQRMRDMLQVSSADPASVPA 70
Query: 161 ---DDVVKALRKSKLLEVTEDGTKVRRTVVVQDKPDV----DECTIYVEKLPPEAEHDYI 213
+ V + L S L++ E TK++RT + ++ +V D +IY P + D I
Sbjct: 71 EAIETVAEILANSSALQLDETKTKIKRTTPLANESEVARAVDARSIYARPFPIDTNVDSI 130
Query: 214 ESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNPCPPDYQSSILTT 273
F+K+ V V + + + KG FVEF++ E+A K L + L ++ + L
Sbjct: 131 TDFFTKHAPVNCVRMRRHVRSKAFKGSVFVEFASVEDADKVLGMSL-----EFDGAPLRM 185
Query: 274 TSRLSF 279
+L F
Sbjct: 186 QKKLEF 191
Score = 41.2 bits (95), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 20/103 (19%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARL----THDP--------DD 46
+EFY SDSNL KD+F + + E PE ++++V + ++ + + DP +
Sbjct: 16 VEFYFSDSNLPKDKFLKERMAEDPEGYVKLNVIIAFQRMRDMLQVSSADPASVPAEAIET 75
Query: 47 VVKALRKSKLLEVTEDGTKVKGNIIRHFLVPISMETEASDNVD 89
V + L S L++ E TK+K P++ E+E + VD
Sbjct: 76 VAEILANSSALQLDETKTKIK------RTTPLANESEVARAVD 112
>gi|18418072|ref|NP_567904.1| La protein 1 [Arabidopsis thaliana]
gi|15810397|gb|AAL07086.1| unknown protein [Arabidopsis thaliana]
gi|332660709|gb|AEE86109.1| La protein 1 [Arabidopsis thaliana]
Length = 433
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 86/166 (51%), Gaps = 19/166 (11%)
Query: 113 IMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN--------KLARLTHD--PDD 162
++ +EFY SDSNL D F + + ES + VS+ L C+ KL D P+D
Sbjct: 14 VLRQVEFYFSDSNLPIDDFLKKTVTESEDGLVSLALICSFSKMRGYLKLGDSKGDDIPED 73
Query: 163 VVKA----LRKSKLLEVTEDGTKVRRTVVVQDKPDVDEC----TIYVEKLPPEAEHDYIE 214
+KA LR S L++++DG KV R+ + D+ E T+ + + + +E
Sbjct: 74 TIKAVADTLRTSSALKISDDGKKVGRSTELLKLEDLIEQLNARTVAASPFSYDVKREDVE 133
Query: 215 SVFSKYGKVTYVSLPKFKSTGKL-KGFAFVEFSTKEEAAKALELGL 259
S FS+YGKV V +P+ + ++ G A VEF T+E+A ++ L
Sbjct: 134 SFFSQYGKVNSVRMPRHVAESRIFSGVALVEFPTEEDAQNVMKQNL 179
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 43/80 (53%), Gaps = 14/80 (17%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN--------KLARLTHD--PDDVVKA 50
+EFY SDSNL D F + + ES + VS+ L C+ KL D P+D +KA
Sbjct: 18 VEFYFSDSNLPIDDFLKKTVTESEDGLVSLALICSFSKMRGYLKLGDSKGDDIPEDTIKA 77
Query: 51 ----LRKSKLLEVTEDGTKV 66
LR S L++++DG KV
Sbjct: 78 VADTLRTSSALKISDDGKKV 97
>gi|356565784|ref|XP_003551117.1| PREDICTED: uncharacterized protein LOC100792984 [Glycine max]
Length = 425
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 91/168 (54%), Gaps = 19/168 (11%)
Query: 111 QQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN-------------KLARLT 157
++++ +EFY SDSNL +D F + + ES + VS+ L C+ KL +T
Sbjct: 12 KKVVRQVEFYFSDSNLPRDNFLRKTVTESEDGMVSLALICSFNRMRTNLNLGDVKLDGVT 71
Query: 158 HDP-DDVVKALRKSKLLEVTEDGTKV-RRTVVVQDKPDVDECTI-YVEKLPPE--AEHDY 212
D V +AL+ S L+ V+EDGTKV R T +++ + +++ I + LP E + +
Sbjct: 72 KDTVKAVAQALKNSALVRVSEDGTKVGRATELLKPEEVIEQVEIRTIAALPFEYDVKLED 131
Query: 213 IESVFSKYGKVTYVSLPKFKSTGK-LKGFAFVEFSTKEEAAKALELGL 259
+E+ F++Y KV V LP+ K G A VEFS+ EE K L+ L
Sbjct: 132 VETFFAQYAKVNSVRLPRHVGDKKFFCGTALVEFSSDEETEKVLKQSL 179
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 44/80 (55%), Gaps = 14/80 (17%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN-------------KLARLTHDP-DD 46
+EFY SDSNL +D F + + ES + VS+ L C+ KL +T D
Sbjct: 18 VEFYFSDSNLPRDNFLRKTVTESEDGMVSLALICSFNRMRTNLNLGDVKLDGVTKDTVKA 77
Query: 47 VVKALRKSKLLEVTEDGTKV 66
V +AL+ S L+ V+EDGTKV
Sbjct: 78 VAQALKNSALVRVSEDGTKV 97
>gi|255549962|ref|XP_002516032.1| lupus la ribonucleoprotein, putative [Ricinus communis]
gi|223544937|gb|EEF46452.1| lupus la ribonucleoprotein, putative [Ricinus communis]
Length = 476
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 84/167 (50%), Gaps = 19/167 (11%)
Query: 112 QIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN--------KLARLTHD--PD 161
+I+N +EFY SDSNL +D F + + +S + VS+ L C+ L R D P
Sbjct: 11 KILNQVEFYFSDSNLPRDDFLMKKVSQSKDGMVSLALVCSFSRIRAFLGLGRTKQDDLPH 70
Query: 162 D----VVKALRKSKLLEVTEDGTKVRR----TVVVQDKPDVDECTIYVEKLPPEAEHDYI 213
+ V K LRKS L V+ DG KV R + + + VD TI + + +
Sbjct: 71 ELLKSVAKILRKSSFLRVSNDGRKVGRVKKLSKIEEVIEQVDVRTIAASPFQYDITMEDV 130
Query: 214 ESVFSKYGKVTYVSLPKFKSTGKL-KGFAFVEFSTKEEAAKALELGL 259
ES F+K+GKV V LP+ + ++ G A +EFST +A L+ L
Sbjct: 131 ESFFAKFGKVNSVRLPRHMANNRVFCGTALIEFSTDGDAEHILKQSL 177
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 41/80 (51%), Gaps = 14/80 (17%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN--------KLARLTHD--PDD---- 46
+EFY SDSNL +D F + + +S + VS+ L C+ L R D P +
Sbjct: 16 VEFYFSDSNLPRDDFLMKKVSQSKDGMVSLALVCSFSRIRAFLGLGRTKQDDLPHELLKS 75
Query: 47 VVKALRKSKLLEVTEDGTKV 66
V K LRKS L V+ DG KV
Sbjct: 76 VAKILRKSSFLRVSNDGRKV 95
>gi|355564959|gb|EHH21448.1| hypothetical protein EGK_04516 [Macaca mulatta]
Length = 408
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 89/168 (52%), Gaps = 11/168 (6%)
Query: 99 DGGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLT 157
+ G + L +I + +E+Y D NL +D+F + ++ + + + + +K N+L RLT
Sbjct: 3 ENGDNEKMAALEAKICHQIEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLT 62
Query: 158 HDPDDVVKALRKSK--LLEVTEDGTKVRRT-------VVVQDKPDVDECTIYVEKLPPEA 208
D + +V+AL KSK L+E++ED TK+RR+ V + K DV ++Y++ P +A
Sbjct: 63 TDFNVIVEALSKSKAELMEISEDKTKIRRSPSKPLPEVTDEYKNDVKNRSVYIKGFPTDA 122
Query: 209 EHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
D I+ G+V + + + KG FV F + E A K +E
Sbjct: 123 TLDDIKEWLEDKGQVLNIQMRRTLHKA-FKGSIFVVFDSIESAKKFVE 169
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 47/70 (67%), Gaps = 3/70 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--LL 57
+E+Y D NL +D+F + ++ + + + + +K N+L RLT D + +V+AL KSK L+
Sbjct: 21 IEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLTTDFNVIVEALSKSKAELM 80
Query: 58 EVTEDGTKVK 67
E++ED TK++
Sbjct: 81 EISEDKTKIR 90
>gi|403258819|ref|XP_003921941.1| PREDICTED: lupus La protein [Saimiri boliviensis boliviensis]
Length = 405
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 89/168 (52%), Gaps = 11/168 (6%)
Query: 99 DGGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLT 157
+ G + L +I + +E+Y D NL +D+F + ++ + + + + +K N+L RLT
Sbjct: 3 ENGDNEKMAALEAKICHQIEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLT 62
Query: 158 HDPDDVVKALRKSK--LLEVTEDGTKVRRT-------VVVQDKPDVDECTIYVEKLPPEA 208
D + +V+AL KSK L+E++ED TK+RR+ V + K DV ++Y++ P +A
Sbjct: 63 TDFNVIVEALSKSKAELMEISEDKTKIRRSPSKPLPEVTDEYKNDVKNRSVYIKGFPTDA 122
Query: 209 EHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
D I+ G+V + + + KG FV F + E A K +E
Sbjct: 123 TLDDIKEWLEDKGQVLNIQMRRTLHKA-FKGSIFVVFDSIESAKKFVE 169
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 47/70 (67%), Gaps = 3/70 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--LL 57
+E+Y D NL +D+F + ++ + + + + +K N+L RLT D + +V+AL KSK L+
Sbjct: 21 IEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLTTDFNVIVEALSKSKAELM 80
Query: 58 EVTEDGTKVK 67
E++ED TK++
Sbjct: 81 EISEDKTKIR 90
>gi|170285557|emb|CAM34498.1| La autoantigen homolog [Cotesia congregata]
Length = 330
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 89/162 (54%), Gaps = 18/162 (11%)
Query: 108 QLYQQIMNLMEFYLSDSNLRKDRFF-SQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKA 166
+L ++I N +EFY D NL++D+F Q+ + I +++ L+ LA +++D + ++KA
Sbjct: 55 ELLEKIKNQIEFYFGDVNLQRDKFLIEQIKLDEGWIPMTIMLQFKLLAAMSNDVEAILKA 114
Query: 167 LRKSKLLEVTEDGTKVRRTVVVQDKP----------DVDECTIYVEKLPPEAEHDYIESV 216
+ +S L+E++++ K+RR V DKP T+Y++ P E + D ++
Sbjct: 115 VEQSDLMEISDNRKKIRRRV---DKPLPLYNEEYRRSQTARTVYLKSFPQEVKLDELKEF 171
Query: 217 FSKYGKVTYVSLPKFKSTG---KLKGFAFVEFSTKEEAAKAL 255
F +G V + + K+K + KG FV+F ++ AKAL
Sbjct: 172 FKDFGVVENIVMRKYKDENQKLQFKGSIFVQFKNLDD-AKAL 212
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 1 MEFYLSDSNLRKDRFF-SQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEV 59
+EFY D NL++D+F Q+ + I +++ L+ LA +++D + ++KA+ +S L+E+
Sbjct: 64 IEFYFGDVNLQRDKFLIEQIKLDEGWIPMTIMLQFKLLAAMSNDVEAILKAVEQSDLMEI 123
Query: 60 TEDGTKVKGNI 70
+++ K++ +
Sbjct: 124 SDNRKKIRRRV 134
>gi|291391704|ref|XP_002712319.1| PREDICTED: autoantigen La [Oryctolagus cuniculus]
Length = 405
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 89/168 (52%), Gaps = 11/168 (6%)
Query: 99 DGGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLT 157
+ G + L +I + +E+Y D NL +D+F + ++ + + + + +K N+L RLT
Sbjct: 3 ENGDSEKMAALEAKICHQIEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLT 62
Query: 158 HDPDDVVKALRKSK--LLEVTEDGTKVRRT-------VVVQDKPDVDECTIYVEKLPPEA 208
D + +V+AL KSK L+E++ED TK+RR+ V + K DV ++Y++ P +A
Sbjct: 63 TDFNVIVEALSKSKAELMEISEDKTKIRRSPSKPLPEVTDEYKNDVKNRSVYIKGFPTDA 122
Query: 209 EHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
D I+ G+V + + + KG FV F + E A K +E
Sbjct: 123 TLDDIKEWLEDKGQVLNIQMRRTLHKA-FKGSIFVVFDSIESAKKFVE 169
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 47/70 (67%), Gaps = 3/70 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--LL 57
+E+Y D NL +D+F + ++ + + + + +K N+L RLT D + +V+AL KSK L+
Sbjct: 21 IEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLTTDFNVIVEALSKSKAELM 80
Query: 58 EVTEDGTKVK 67
E++ED TK++
Sbjct: 81 EISEDKTKIR 90
>gi|402888573|ref|XP_003907632.1| PREDICTED: lupus La protein [Papio anubis]
gi|90076382|dbj|BAE87871.1| unnamed protein product [Macaca fascicularis]
gi|90076420|dbj|BAE87890.1| unnamed protein product [Macaca fascicularis]
gi|380815904|gb|AFE79826.1| lupus La protein [Macaca mulatta]
gi|380815906|gb|AFE79827.1| lupus La protein [Macaca mulatta]
gi|383421063|gb|AFH33745.1| lupus La protein [Macaca mulatta]
gi|383421065|gb|AFH33746.1| lupus La protein [Macaca mulatta]
gi|384949002|gb|AFI38106.1| lupus La protein [Macaca mulatta]
gi|384949004|gb|AFI38107.1| lupus La protein [Macaca mulatta]
Length = 405
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 89/168 (52%), Gaps = 11/168 (6%)
Query: 99 DGGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLT 157
+ G + L +I + +E+Y D NL +D+F + ++ + + + + +K N+L RLT
Sbjct: 3 ENGDNEKMAALEAKICHQIEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLT 62
Query: 158 HDPDDVVKALRKSK--LLEVTEDGTKVRRT-------VVVQDKPDVDECTIYVEKLPPEA 208
D + +V+AL KSK L+E++ED TK+RR+ V + K DV ++Y++ P +A
Sbjct: 63 TDFNVIVEALSKSKAELMEISEDKTKIRRSPSKPLPEVTDEYKNDVKNRSVYIKGFPTDA 122
Query: 209 EHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
D I+ G+V + + + KG FV F + E A K +E
Sbjct: 123 TLDDIKEWLEDKGQVLNIQMRRTLHKA-FKGSIFVVFDSIESAKKFVE 169
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 47/70 (67%), Gaps = 3/70 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--LL 57
+E+Y D NL +D+F + ++ + + + + +K N+L RLT D + +V+AL KSK L+
Sbjct: 21 IEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLTTDFNVIVEALSKSKAELM 80
Query: 58 EVTEDGTKVK 67
E++ED TK++
Sbjct: 81 EISEDKTKIR 90
>gi|332210376|ref|XP_003254283.1| PREDICTED: lupus La protein isoform 1 [Nomascus leucogenys]
Length = 405
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 89/168 (52%), Gaps = 11/168 (6%)
Query: 99 DGGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLT 157
+ G + L +I + +E+Y D NL +D+F + ++ + + + + +K N+L RLT
Sbjct: 3 ENGDNEKMAALEAKICHQIEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLT 62
Query: 158 HDPDDVVKALRKSK--LLEVTEDGTKVRRT-------VVVQDKPDVDECTIYVEKLPPEA 208
D + +V+AL KSK L+E++ED TK+RR+ V + K DV ++Y++ P +A
Sbjct: 63 TDFNVIVEALSKSKAELMEISEDKTKIRRSPSKPLPEVTDEYKNDVKNRSVYIKGFPTDA 122
Query: 209 EHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
D I+ G+V + + + KG FV F + E A K +E
Sbjct: 123 TLDDIKEWLEDKGQVLNIQMRRTLHKA-FKGSIFVVFDSIESAKKFVE 169
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 47/70 (67%), Gaps = 3/70 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--LL 57
+E+Y D NL +D+F + ++ + + + + +K N+L RLT D + +V+AL KSK L+
Sbjct: 21 IEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLTTDFNVIVEALSKSKAELM 80
Query: 58 EVTEDGTKVK 67
E++ED TK++
Sbjct: 81 EISEDKTKIR 90
>gi|431899636|gb|ELK07590.1| La-related protein 7 [Pteropus alecto]
Length = 462
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 79/130 (60%), Gaps = 7/130 (5%)
Query: 78 ISMETEASDNVDKDL---SDLQRKDGGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQ 134
+ METE S N +K + S ++ + R R KQ+ I ++F+ D+NL KDRF +
Sbjct: 16 LGMETE-SGNQEKAMEEESTEKKVEKKKRSRVKQVLADIAKQVDFWFGDANLHKDRFLRE 74
Query: 135 LLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEVTEDGTKVRRTVVVQDKP 192
+++S + +++S+ + NK+ +LT D + +ALR S ++E+ +GT++RR + ++P
Sbjct: 75 QIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALRSSAVVELDLEGTRIRRKKPLGERP 134
Query: 193 -DVDECTIYV 201
D DE T+YV
Sbjct: 135 QDEDERTVYV 144
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 47/69 (68%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
++F+ D+NL KDRF + +++S + +++S+ + NK+ +LT D + +ALR S ++E
Sbjct: 57 VDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALRSSAVVE 116
Query: 59 VTEDGTKVK 67
+ +GT+++
Sbjct: 117 LDLEGTRIR 125
>gi|197692403|dbj|BAG70165.1| autoantigen La [Homo sapiens]
Length = 408
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 89/168 (52%), Gaps = 11/168 (6%)
Query: 99 DGGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLT 157
+ G + L +I + +E+Y D NL +D+F + ++ + + + + +K N+L RLT
Sbjct: 3 ENGDNEKMAALEAKICHQIEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLT 62
Query: 158 HDPDDVVKALRKSK--LLEVTEDGTKVRRT-------VVVQDKPDVDECTIYVEKLPPEA 208
D + +V+AL KSK L+E++ED TK+RR+ V + K DV ++Y++ P +A
Sbjct: 63 TDFNVIVEALSKSKAELMEISEDKTKIRRSPSKPLPEVTDEYKNDVKNRSVYIKGFPTDA 122
Query: 209 EHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
D I+ G+V + + + KG FV F + E A K +E
Sbjct: 123 TLDDIKEWLEDKGQVLNIQMRRTLHKA-FKGSIFVVFDSIESAKKFVE 169
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 47/70 (67%), Gaps = 3/70 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--LL 57
+E+Y D NL +D+F + ++ + + + + +K N+L RLT D + +V+AL KSK L+
Sbjct: 21 IEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLTTDFNVIVEALSKSKAELM 80
Query: 58 EVTEDGTKVK 67
E++ED TK++
Sbjct: 81 EISEDKTKIR 90
>gi|10835067|ref|NP_003133.1| lupus La protein [Homo sapiens]
gi|114581628|ref|XP_001138273.1| PREDICTED: lupus La protein isoform 5 [Pan troglodytes]
gi|114581630|ref|XP_001138190.1| PREDICTED: lupus La protein isoform 4 [Pan troglodytes]
gi|397507722|ref|XP_003824337.1| PREDICTED: lupus La protein isoform 1 [Pan paniscus]
gi|397507724|ref|XP_003824338.1| PREDICTED: lupus La protein isoform 2 [Pan paniscus]
gi|125985|sp|P05455.2|LA_HUMAN RecName: Full=Lupus La protein; AltName: Full=La autoantigen;
AltName: Full=La ribonucleoprotein; AltName:
Full=Sjoegren syndrome type B antigen; Short=SS-B
gi|36415|emb|CAA31985.1| unnamed protein product [Homo sapiens]
gi|178687|gb|AAA51885.1| La protein [Homo sapiens]
gi|12654891|gb|AAH01289.1| Sjogren syndrome antigen B (autoantigen La) [Homo sapiens]
gi|18089160|gb|AAH20818.1| Sjogren syndrome antigen B (autoantigen La) [Homo sapiens]
gi|32880067|gb|AAP88864.1| Sjogren syndrome antigen B (autoantigen La) [Homo sapiens]
gi|60654899|gb|AAX32014.1| Sjogren syndrome antigen B [synthetic construct]
gi|60654901|gb|AAX32015.1| Sjogren syndrome antigen B [synthetic construct]
gi|60654903|gb|AAX32016.1| Sjogren syndrome antigen B [synthetic construct]
gi|62822319|gb|AAY14868.1| unknown [Homo sapiens]
gi|119631663|gb|EAX11258.1| Sjogren syndrome antigen B (autoantigen La), isoform CRA_c [Homo
sapiens]
gi|119631664|gb|EAX11259.1| Sjogren syndrome antigen B (autoantigen La), isoform CRA_c [Homo
sapiens]
gi|123995567|gb|ABM85385.1| Sjogren syndrome antigen B (autoantigen La) [synthetic construct]
gi|197692157|dbj|BAG70042.1| autoantigen La [Homo sapiens]
gi|261858600|dbj|BAI45822.1| Sjogren syndrome antigen B [synthetic construct]
gi|410360334|gb|JAA44676.1| Sjogren syndrome antigen B (autoantigen La) [Pan troglodytes]
gi|410360340|gb|JAA44679.1| Sjogren syndrome antigen B (autoantigen La) [Pan troglodytes]
Length = 408
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 89/168 (52%), Gaps = 11/168 (6%)
Query: 99 DGGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLT 157
+ G + L +I + +E+Y D NL +D+F + ++ + + + + +K N+L RLT
Sbjct: 3 ENGDNEKMAALEAKICHQIEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLT 62
Query: 158 HDPDDVVKALRKSK--LLEVTEDGTKVRRT-------VVVQDKPDVDECTIYVEKLPPEA 208
D + +V+AL KSK L+E++ED TK+RR+ V + K DV ++Y++ P +A
Sbjct: 63 TDFNVIVEALSKSKAELMEISEDKTKIRRSPSKPLPEVTDEYKNDVKNRSVYIKGFPTDA 122
Query: 209 EHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
D I+ G+V + + + KG FV F + E A K +E
Sbjct: 123 TLDDIKEWLEDKGQVLNIQMRRTLHKA-FKGSIFVVFDSIESAKKFVE 169
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 47/70 (67%), Gaps = 3/70 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--LL 57
+E+Y D NL +D+F + ++ + + + + +K N+L RLT D + +V+AL KSK L+
Sbjct: 21 IEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLTTDFNVIVEALSKSKAELM 80
Query: 58 EVTEDGTKVK 67
E++ED TK++
Sbjct: 81 EISEDKTKIR 90
>gi|145334751|ref|NP_001078721.1| RNA-binding protein [Arabidopsis thaliana]
gi|332007976|gb|AED95359.1| RNA-binding protein [Arabidopsis thaliana]
Length = 340
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 84/162 (51%), Gaps = 14/162 (8%)
Query: 108 QLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVK 165
+L Q+I+ +E+Y SD NL D+F ++ + + + +S +K+ +LT D +V
Sbjct: 102 ELNQKIIRQVEYYFSDENLPTDKFLLNAMKRNKKGFVPISTIATFHKMKKLTRDHALIVS 161
Query: 166 ALRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTY 225
AL++S L V+ D KV+R + + D T+ VE LP + ++ I +F K G +
Sbjct: 162 ALKESSFLVVSADEKKVKRLSPLPEIRDPKIFTVLVENLPEDHSNENIREIFGKAGSIKS 221
Query: 226 VSL------PKFKSTGKLKGF------AFVEFSTKEEAAKAL 255
VS+ + + GK + F AFVE+ T E A KA+
Sbjct: 222 VSICDPNAVEESEKGGKKENFIRTRLHAFVEYETVEAAEKAV 263
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
+E+Y SD NL D+F ++ + + + +S +K+ +LT D +V AL++S L
Sbjct: 111 VEYYFSDENLPTDKFLLNAMKRNKKGFVPISTIATFHKMKKLTRDHALIVSALKESSFLV 170
Query: 59 VTEDGTKVK 67
V+ D KVK
Sbjct: 171 VSADEKKVK 179
>gi|324510662|gb|ADY44458.1| Lupus La protein B [Ascaris suum]
Length = 420
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 85/151 (56%), Gaps = 9/151 (5%)
Query: 108 QLYQQIMNLMEFYLSDSNLRKDRFFS-QLLQESPEIEVSVFLKCNKLARLTHDPDDVVKA 166
+L ++I+ +EFY D NL +DRF +L ++ + +S +K N+LA+++ D D + +A
Sbjct: 42 ELSKRIVEQVEFYFGDINLPRDRFLQDELKKDDGWVPLSTMIKFNRLAQMSTDVDVIAEA 101
Query: 167 LRKSKLLEVTEDGTKVRR-------TVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSK 219
L+ SKL+EV++D K+RR ++ + T+Y++ ++ D I++ +
Sbjct: 102 LKHSKLIEVSDDKAKIRRDPKLALPENSLEYWQSIKHRTVYIKGFKVDSTLDEIQNFVKQ 161
Query: 220 YGKVTYVSLPKFKSTG-KLKGFAFVEFSTKE 249
+G+V V + + K + KG FV F T++
Sbjct: 162 FGEVDNVLMRREKGAERRFKGSVFVTFKTRD 192
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Query: 1 MEFYLSDSNLRKDRFFS-QLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEV 59
+EFY D NL +DRF +L ++ + +S +K N+LA+++ D D + +AL+ SKL+EV
Sbjct: 51 VEFYFGDINLPRDRFLQDELKKDDGWVPLSTMIKFNRLAQMSTDVDVIAEALKHSKLIEV 110
Query: 60 TEDGTKVK 67
++D K++
Sbjct: 111 SDDKAKIR 118
>gi|296204578|ref|XP_002749328.1| PREDICTED: lupus La protein [Callithrix jacchus]
Length = 405
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 89/168 (52%), Gaps = 11/168 (6%)
Query: 99 DGGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLT 157
+ G + L +I + +E+Y D NL +D+F + ++ + + + + +K N+L RLT
Sbjct: 3 ENGDNEKMAALETKICHQIEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLT 62
Query: 158 HDPDDVVKALRKSK--LLEVTEDGTKVRRT-------VVVQDKPDVDECTIYVEKLPPEA 208
D + +V+AL KSK L+E++ED TK+RR+ V + K DV ++Y++ P +A
Sbjct: 63 TDFNVIVEALSKSKAELMEISEDKTKIRRSPSKPLPEVTDEYKNDVKNRSVYIKGFPTDA 122
Query: 209 EHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
D I+ G+V + + + KG F+ F + E A K +E
Sbjct: 123 TLDDIKEWLEDKGQVLNIQMRRTLHKA-FKGSIFIVFDSIESAKKFVE 169
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 47/70 (67%), Gaps = 3/70 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--LL 57
+E+Y D NL +D+F + ++ + + + + +K N+L RLT D + +V+AL KSK L+
Sbjct: 21 IEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLTTDFNVIVEALSKSKAELM 80
Query: 58 EVTEDGTKVK 67
E++ED TK++
Sbjct: 81 EISEDKTKIR 90
>gi|407405769|gb|EKF30602.1| la RNA binding protein, putative [Trypanosoma cruzi marinkellei]
Length = 333
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 79/161 (49%), Gaps = 13/161 (8%)
Query: 112 QIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRK 169
++ +EFY SD N++KD F + E+ E + + L N++ T + ++ A++
Sbjct: 10 KLQRQVEFYFSDVNVQKDVFLKAKMAENAEGFVPLETLLTFNRVNSTTKEVSELAAAIKP 69
Query: 170 SKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLP 229
S+ L ++EDG VRR + + DE T+YV+ LPP A + + FS+YG V V
Sbjct: 70 SEKLVLSEDGLMVRRRDPLPESIQTDEQTVYVKPLPPGATLEELTEFFSQYGTVQAVWRR 129
Query: 230 KF------KSTGKLKGFAFVEFSTKEEAAKALELGLNPCPP 264
F + + K FV F TK+EA L PP
Sbjct: 130 YFPGKKDAEPEARTKPSVFVVFGTKKEAE-----ALKASPP 165
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 47/85 (55%), Gaps = 6/85 (7%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
+EFY SD N++KD F + E+ E + + L N++ T + ++ A++ S+ L
Sbjct: 15 VEFYFSDVNVQKDVFLKAKMAENAEGFVPLETLLTFNRVNSTTKEVSELAAAIKPSEKLV 74
Query: 59 VTEDGTKVKGNIIRHFLVPISMETE 83
++EDG V+ R +P S++T+
Sbjct: 75 LSEDGLMVR----RRDPLPESIQTD 95
>gi|432933074|ref|XP_004081794.1| PREDICTED: lupus La protein homolog [Oryzias latipes]
Length = 400
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 81/155 (52%), Gaps = 11/155 (7%)
Query: 112 QIMNLMEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKALRKS 170
++ +E+Y D NL +DRF + LQ + + + LK N+L LT + ++ AL+KS
Sbjct: 14 KVARQLEYYFGDHNLPRDRFLKEQLQLDDGWVTLETMLKFNRLKSLTTENSVIISALQKS 73
Query: 171 K--LLEVTEDGTKVRRT-------VVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYG 221
K LLE++ED TKVRR+ V + K V ++Y++ P E D I+ + G
Sbjct: 74 KTGLLEISEDKTKVRRSPDKPLPEVNDEYKDAVKHRSVYIKGFPLETTLDEIQEWLNDKG 133
Query: 222 KVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
V V + + K KG FV F ++E A + LE
Sbjct: 134 DVENVQMRRTLQR-KFKGSVFVCFGSEESAKQFLE 167
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%), Gaps = 3/70 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--LL 57
+E+Y D NL +DRF + LQ + + + LK N+L LT + ++ AL+KSK LL
Sbjct: 19 LEYYFGDHNLPRDRFLKEQLQLDDGWVTLETMLKFNRLKSLTTENSVIISALQKSKTGLL 78
Query: 58 EVTEDGTKVK 67
E++ED TKV+
Sbjct: 79 EISEDKTKVR 88
>gi|344267988|ref|XP_003405846.1| PREDICTED: lupus La protein homolog [Loxodonta africana]
Length = 406
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 89/168 (52%), Gaps = 11/168 (6%)
Query: 99 DGGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLT 157
+ G + L +I + +E+Y D NL +D+F + ++ + + + + +K N+L RLT
Sbjct: 3 ENGDSEKMAALEAKICHQIEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLT 62
Query: 158 HDPDDVVKALRKSK--LLEVTEDGTKVRRT-------VVVQDKPDVDECTIYVEKLPPEA 208
D + +V+AL KSK L+E++ED TK+RR+ V + K DV ++Y++ P +A
Sbjct: 63 TDFNVIVEALSKSKVELMEISEDKTKIRRSPSKPLPEVTDEYKNDVKNRSVYIKGFPTDA 122
Query: 209 EHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
D I+ G+V + + + KG FV F + E A K +E
Sbjct: 123 TLDDIKEWLEDKGQVLNILMRRTLHKA-FKGSIFVVFDSIESAKKFVE 169
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 47/70 (67%), Gaps = 3/70 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--LL 57
+E+Y D NL +D+F + ++ + + + + +K N+L RLT D + +V+AL KSK L+
Sbjct: 21 IEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLTTDFNVIVEALSKSKVELM 80
Query: 58 EVTEDGTKVK 67
E++ED TK++
Sbjct: 81 EISEDKTKIR 90
>gi|443723200|gb|ELU11731.1| hypothetical protein CAPTEDRAFT_173881 [Capitella teleta]
Length = 387
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 81/154 (52%), Gaps = 10/154 (6%)
Query: 112 QIMNLMEFYLSDSNLRKDRFFSQLLQESPE-IEVSVFLKCNKLARLTHDPDDVVKALRKS 170
+I+ +E+Y D NL +D+F L++E + LK N+L L D + + A+RKS
Sbjct: 19 KIIRQIEYYFGDLNLMRDKFLQGLIREDDGWVTFETMLKFNRLNSLCSDLEVLAAAMRKS 78
Query: 171 K-LLEVTEDGTKVRR----TVVVQDK---PDVDECTIYVEKLPPEAEHDYIESVFSKYGK 222
L+EV+EDG K+RR V DK D+++ +IY + P E+ D + F K+GK
Sbjct: 79 TVLMEVSEDGKKLRRLPSKPVPTPDKDHREDLNQRSIYAKAFPVESTLDELIEFFEKFGK 138
Query: 223 VTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
+ + K + + KG +V + T E A +E
Sbjct: 139 TEQIQMRK-NAQREFKGSVYVVYQTTEAAKNFIE 171
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE-IEVSVFLKCNKLARLTHDPDDVVKALRKSK-LLE 58
+E+Y D NL +D+F L++E + LK N+L L D + + A+RKS L+E
Sbjct: 24 IEYYFGDLNLMRDKFLQGLIREDDGWVTFETMLKFNRLNSLCSDLEVLAAAMRKSTVLME 83
Query: 59 VTEDGTKVK 67
V+EDG K++
Sbjct: 84 VSEDGKKLR 92
>gi|426220921|ref|XP_004004660.1| PREDICTED: lupus La protein homolog [Ovis aries]
Length = 405
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 88/168 (52%), Gaps = 11/168 (6%)
Query: 99 DGGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLT 157
+ G + L +I + +E+Y D NL +D+F + ++ + + + + +K N+L RLT
Sbjct: 3 ENGDNEKMAALEAKICHQIEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLT 62
Query: 158 HDPDDVVKALRKSK--LLEVTEDGTKVRRT-------VVVQDKPDVDECTIYVEKLPPEA 208
D + +V+AL KSK L+E++ED TK+RR+ V + K DV ++Y++ P +A
Sbjct: 63 TDFNVIVEALSKSKAELMEISEDKTKIRRSPSKPLPEVTDEYKNDVKNRSVYIKGFPTDA 122
Query: 209 EHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
D I+ G+V + + + KG F F + E A K +E
Sbjct: 123 ALDDIKEWLEDKGQVLNIQMRRTLHKA-FKGSIFAVFDSIESAKKFVE 169
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 47/70 (67%), Gaps = 3/70 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--LL 57
+E+Y D NL +D+F + ++ + + + + +K N+L RLT D + +V+AL KSK L+
Sbjct: 21 IEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLTTDFNVIVEALSKSKAELM 80
Query: 58 EVTEDGTKVK 67
E++ED TK++
Sbjct: 81 EISEDKTKIR 90
>gi|353244260|emb|CCA75684.1| hypothetical protein PIIN_09674 [Piriformospora indica DSM 11827]
Length = 478
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 73/138 (52%), Gaps = 9/138 (6%)
Query: 117 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTH-DPDDVVKALRKSKLL 173
MEFY SDSNL D++ ++P+ I + F K N++A + + LR S LL
Sbjct: 36 MEFYFSDSNLPYDKYLWTEHDKTPDHWIPLDKFYKFNRMAEFQSLGLEWLADTLRASTLL 95
Query: 174 EVTEDGTKVRR--TVVVQDKPDVDECTIYVEKLPPEAEHDY---IESVFSKYGKVTYVSL 228
E+ E+G VRR VV + KP VDE ++YV+ P D +E F+++G V V +
Sbjct: 96 EIDEEGKNVRRRTAVVERPKPSVDERSVYVKGFPTTEYRDMQMDLERYFARFGAVACVRM 155
Query: 229 PKFKSTGKLKGFAFVEFS 246
+ + K KG F EFS
Sbjct: 156 RRDQDK-KFKGSVFCEFS 172
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTH-DPDDVVKALRKSKLL 57
MEFY SDSNL D++ ++P+ I + F K N++A + + LR S LL
Sbjct: 36 MEFYFSDSNLPYDKYLWTEHDKTPDHWIPLDKFYKFNRMAEFQSLGLEWLADTLRASTLL 95
Query: 58 EVTEDGTKVK 67
E+ E+G V+
Sbjct: 96 EIDEEGKNVR 105
>gi|426338949|ref|XP_004033432.1| PREDICTED: uncharacterized protein LOC101143309 [Gorilla gorilla
gorilla]
Length = 387
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 83/155 (53%), Gaps = 11/155 (7%)
Query: 112 QIMNLMEFYLSDSNLRKDRFF-SQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKS 170
Q++ L +Y D NL +D+F Q+ + + + + +K N+L RLT D + +V+AL KS
Sbjct: 58 QVLRLGRYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLTTDFNVIVEALSKS 117
Query: 171 K--LLEVTEDGTKVRRT-------VVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYG 221
K L+E++ED TK+RR+ V + K DV ++Y++ P +A D I+ G
Sbjct: 118 KAELMEISEDKTKIRRSPSKPLPEVTDEYKNDVKNRSVYIKGFPTDATLDDIKEWLEDKG 177
Query: 222 KVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
+V + + + KG FV F + E A K +E
Sbjct: 178 QVLNIQMRRTLHKA-FKGSIFVVFDSIESAKKFVE 211
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 44/68 (64%), Gaps = 3/68 (4%)
Query: 3 FYLSDSNLRKDRFF-SQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--LLEV 59
+Y D NL +D+F Q+ + + + + +K N+L RLT D + +V+AL KSK L+E+
Sbjct: 65 YYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLTTDFNVIVEALSKSKAELMEI 124
Query: 60 TEDGTKVK 67
+ED TK++
Sbjct: 125 SEDKTKIR 132
>gi|164658732|ref|XP_001730491.1| hypothetical protein MGL_2287 [Malassezia globosa CBS 7966]
gi|159104387|gb|EDP43277.1| hypothetical protein MGL_2287 [Malassezia globosa CBS 7966]
Length = 259
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 88/182 (48%), Gaps = 15/182 (8%)
Query: 113 IMNLMEFYLSDSNLRKDRFFSQLLQESPE----IEVSVFLKCNKLARLTHDPDDVVKALR 168
++ +EFY +D+NL D+F L ++ PE I+ K K R D+ +ALR
Sbjct: 25 VLKQVEFYFADANLPFDKFLFTLTRKDPEGWVPIDTIASFKRMKPMREVLSSQDIAEALR 84
Query: 169 KS-KLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAE--HDYIESVFSKYGKVTY 225
S LLEV DG +VRR ++ PD +IY + P E + + +ES F+++GK+
Sbjct: 85 GSTSLLEVDSDGKRVRRKAEMKPVPDAHARSIYAKGFPDEFDGLQEELESFFAQFGKING 144
Query: 226 VSLPK-FKSTGKLKGFAFVEFSTKEEAAKALELGLNPCPP-------DYQSSILTTTSRL 277
V + + + K K FVEF+ E LE P +Y+ + L T S+
Sbjct: 145 VRMRRENEKPRKFKNSVFVEFADAAEMRAFLEKAKATEPQEDGGHGIEYKGAKLVTMSKP 204
Query: 278 SF 279
++
Sbjct: 205 AY 206
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 5/72 (6%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE----IEVSVFLKCNKLARLTHDPDDVVKALRKS-K 55
+EFY +D+NL D+F L ++ PE I+ K K R D+ +ALR S
Sbjct: 29 VEFYFADANLPFDKFLFTLTRKDPEGWVPIDTIASFKRMKPMREVLSSQDIAEALRGSTS 88
Query: 56 LLEVTEDGTKVK 67
LLEV DG +V+
Sbjct: 89 LLEVDSDGKRVR 100
>gi|126326301|ref|XP_001367741.1| PREDICTED: lupus La protein homolog [Monodelphis domestica]
Length = 405
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 87/168 (51%), Gaps = 11/168 (6%)
Query: 99 DGGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLT 157
+ G + L +I +E+Y D NL +D+F + ++ + + + + +K N+L++LT
Sbjct: 3 ENGDSEKMTDLESKICQQIEYYFGDFNLPRDKFLKEQIKIDDGWVPLEIMIKFNRLSKLT 62
Query: 158 HDPDDVVKALRKSK--LLEVTEDGTKVRRT-------VVVQDKPDVDECTIYVEKLPPEA 208
D D + AL+KSK L+EV+ED TK+RR+ V + K +V +IYV+ P +A
Sbjct: 63 KDFDVIRSALKKSKAELMEVSEDKTKIRRSPSKPLPEVTDEYKNEVKNRSIYVKGFPTDA 122
Query: 209 EHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
D I+ G+V + + + KG F F + E A K +E
Sbjct: 123 TLDDIKEWLEGKGQVQNIQMRRTLHKA-FKGSIFAVFDSVESAKKFIE 169
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 47/70 (67%), Gaps = 3/70 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--LL 57
+E+Y D NL +D+F + ++ + + + + +K N+L++LT D D + AL+KSK L+
Sbjct: 21 IEYYFGDFNLPRDKFLKEQIKIDDGWVPLEIMIKFNRLSKLTKDFDVIRSALKKSKAELM 80
Query: 58 EVTEDGTKVK 67
EV+ED TK++
Sbjct: 81 EVSEDKTKIR 90
>gi|30694922|ref|NP_851141.1| RNA-binding protein [Arabidopsis thaliana]
gi|15215748|gb|AAK91419.1| AT5g46250/MPL12_3 [Arabidopsis thaliana]
gi|23308375|gb|AAN18157.1| At5g46250/MPL12_3 [Arabidopsis thaliana]
gi|332007974|gb|AED95357.1| RNA-binding protein [Arabidopsis thaliana]
Length = 422
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 83/161 (51%), Gaps = 14/161 (8%)
Query: 108 QLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVK 165
+L Q+I+ +E+Y SD NL D+F ++ + + + +S +K+ +LT D +V
Sbjct: 102 ELNQKIIRQVEYYFSDENLPTDKFLLNAMKRNKKGFVPISTIATFHKMKKLTRDHALIVS 161
Query: 166 ALRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTY 225
AL++S L V+ D KV+R + + D T+ VE LP + ++ I +F K G +
Sbjct: 162 ALKESSFLVVSADEKKVKRLSPLPEIRDPKIFTVLVENLPEDHSNENIREIFGKAGSIKS 221
Query: 226 VSL------PKFKSTGKLKGF------AFVEFSTKEEAAKA 254
VS+ + + GK + F AFVE+ T E A KA
Sbjct: 222 VSICDPNAVEESEKGGKKENFIRTRLHAFVEYETVEAAEKA 262
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
+E+Y SD NL D+F ++ + + + +S +K+ +LT D +V AL++S L
Sbjct: 111 VEYYFSDENLPTDKFLLNAMKRNKKGFVPISTIATFHKMKKLTRDHALIVSALKESSFLV 170
Query: 59 VTEDGTKVK 67
V+ D KVK
Sbjct: 171 VSADEKKVK 179
>gi|145358920|ref|NP_568660.3| RNA-binding protein [Arabidopsis thaliana]
gi|332007975|gb|AED95358.1| RNA-binding protein [Arabidopsis thaliana]
Length = 340
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 83/161 (51%), Gaps = 14/161 (8%)
Query: 108 QLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVK 165
+L Q+I+ +E+Y SD NL D+F ++ + + + +S +K+ +LT D +V
Sbjct: 102 ELNQKIIRQVEYYFSDENLPTDKFLLNAMKRNKKGFVPISTIATFHKMKKLTRDHALIVS 161
Query: 166 ALRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTY 225
AL++S L V+ D KV+R + + D T+ VE LP + ++ I +F K G +
Sbjct: 162 ALKESSFLVVSADEKKVKRLSPLPEIRDPKIFTVLVENLPEDHSNENIREIFGKAGSIKS 221
Query: 226 VSL------PKFKSTGKLKGF------AFVEFSTKEEAAKA 254
VS+ + + GK + F AFVE+ T E A KA
Sbjct: 222 VSICDPNAVEESEKGGKKENFIRTRLHAFVEYETVEAAEKA 262
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
+E+Y SD NL D+F ++ + + + +S +K+ +LT D +V AL++S L
Sbjct: 111 VEYYFSDENLPTDKFLLNAMKRNKKGFVPISTIATFHKMKKLTRDHALIVSALKESSFLV 170
Query: 59 VTEDGTKVK 67
V+ D KVK
Sbjct: 171 VSADEKKVK 179
>gi|380012601|ref|XP_003690368.1| PREDICTED: la protein homolog [Apis florea]
Length = 404
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 85/156 (54%), Gaps = 12/156 (7%)
Query: 108 QLYQQIMNLMEFYLSDSNLRKDRFF-SQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKA 166
+L ++I N +EFY D N+++D+F Q + + ++V L LA ++ +PD ++KA
Sbjct: 44 ELLEKIKNQIEFYFGDVNMQRDKFLIEQTKLDDGWVPMTVMLNFKMLASMSQEPDVILKA 103
Query: 167 LRKSKLLEVTEDGTKVRRT------VVVQDKPDVDEC-TIYVEKLP-PEAEHDYIESVFS 218
+ SKL+E++ED K+RR+ + ++ E T YV+ P + + +++ FS
Sbjct: 104 IELSKLMEISEDKKKIRRSPKCPLPIYNEEYRKAQEARTAYVKGFPLQDTNIEKLKTFFS 163
Query: 219 KYGKVTYVSLPKFKSTGK---LKGFAFVEFSTKEEA 251
Y + + K++ GK KG FV+F T E+A
Sbjct: 164 AYEPFENIVMRKYQDKGKKLQFKGSIFVQFKTLEDA 199
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 1 MEFYLSDSNLRKDRFF-SQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEV 59
+EFY D N+++D+F Q + + ++V L LA ++ +PD ++KA+ SKL+E+
Sbjct: 53 IEFYFGDVNMQRDKFLIEQTKLDDGWVPMTVMLNFKMLASMSQEPDVILKAIELSKLMEI 112
Query: 60 TEDGTKVK 67
+ED K++
Sbjct: 113 SEDKKKIR 120
>gi|410968806|ref|XP_003990890.1| PREDICTED: LOW QUALITY PROTEIN: lupus La protein homolog [Felis
catus]
Length = 406
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 87/165 (52%), Gaps = 11/165 (6%)
Query: 99 DGGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLT 157
+ G + L +I + +E+Y D NL +D+F + ++ + + + + +K N+L RLT
Sbjct: 3 ENGDNEKMAALEAKICHQIEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLT 62
Query: 158 HDPDDVVKALRKSK--LLEVTEDGTKVRRT-------VVVQDKPDVDECTIYVEKLPPEA 208
D + +V+AL KSK L+E++ED TK+RR+ V + K DV ++Y++ P +A
Sbjct: 63 TDFNVIVEALSKSKAELMEISEDKTKIRRSPSKPLPEVTDEYKNDVKNRSVYIKGFPTDA 122
Query: 209 EHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAK 253
D I+ G+V + + + KG FV F + E A K
Sbjct: 123 TLDDIKEWLEDKGQVLNIQMRRTLHKA-FKGSIFVVFESIESAKK 166
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 47/70 (67%), Gaps = 3/70 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--LL 57
+E+Y D NL +D+F + ++ + + + + +K N+L RLT D + +V+AL KSK L+
Sbjct: 21 IEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLTTDFNVIVEALSKSKAELM 80
Query: 58 EVTEDGTKVK 67
E++ED TK++
Sbjct: 81 EISEDKTKIR 90
>gi|110759433|ref|XP_395300.3| PREDICTED: la protein homolog [Apis mellifera]
Length = 404
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 85/156 (54%), Gaps = 12/156 (7%)
Query: 108 QLYQQIMNLMEFYLSDSNLRKDRFF-SQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKA 166
+L ++I N +EFY D N+++D+F Q + + ++V L LA ++ +PD ++KA
Sbjct: 44 ELLEKIKNQIEFYFGDVNMQRDKFLIEQTKLDDGWVPMTVMLNFKMLASMSQEPDVILKA 103
Query: 167 LRKSKLLEVTEDGTKVRRT------VVVQDKPDVDEC-TIYVEKLP-PEAEHDYIESVFS 218
+ SKL+E++ED K+RR+ + ++ E T YV+ P + + +++ FS
Sbjct: 104 IELSKLMEISEDKKKIRRSPKCPLPIYNEEYRKAQEARTAYVKGFPLQDTNIEKLKTFFS 163
Query: 219 KYGKVTYVSLPKFKSTGK---LKGFAFVEFSTKEEA 251
Y + + K++ GK KG FV+F T E+A
Sbjct: 164 AYEPFENIVMRKYQDKGKKLQFKGSIFVQFKTLEDA 199
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 1 MEFYLSDSNLRKDRFF-SQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEV 59
+EFY D N+++D+F Q + + ++V L LA ++ +PD ++KA+ SKL+E+
Sbjct: 53 IEFYFGDVNMQRDKFLIEQTKLDDGWVPMTVMLNFKMLASMSQEPDVILKAIELSKLMEI 112
Query: 60 TEDGTKVK 67
+ED K++
Sbjct: 113 SEDKKKIR 120
>gi|115447237|ref|NP_001047398.1| Os02g0610400 [Oryza sativa Japonica Group]
gi|47496847|dbj|BAD19607.1| putative RNA recognition motif (RRM)-containing protein [Oryza
sativa Japonica Group]
gi|47497176|dbj|BAD19223.1| putative RNA recognition motif (RRM)-containing protein [Oryza
sativa Japonica Group]
gi|113536929|dbj|BAF09312.1| Os02g0610400 [Oryza sativa Japonica Group]
gi|125582845|gb|EAZ23776.1| hypothetical protein OsJ_07484 [Oryza sativa Japonica Group]
gi|215734852|dbj|BAG95574.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 467
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 89/170 (52%), Gaps = 22/170 (12%)
Query: 111 QQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHD----------- 159
+ ++ +EFY SDSNL +D+F + +++ + VS+ L C+ AR+
Sbjct: 16 KSVLRQVEFYFSDSNLPRDKFLRETVEQREDGLVSLALICS-FARMKSHLGLDAAVKPET 74
Query: 160 -PDDVVKA----LRKSKLLEVTEDGTKVRRT--VVVQDK--PDVDECTIYVEKLPPEAEH 210
P++ V A LR+S++L ++EDG V R ++ D+ VD T+ LP +
Sbjct: 75 VPEETVLAVAEVLRRSQMLRISEDGKMVGRASELLKADEIIKQVDSRTVAASPLPYNVKL 134
Query: 211 DYIESVFSKYGKVTYVSLPKFKSTGK-LKGFAFVEFSTKEEAAKALELGL 259
+ ++S F++Y KV V LP+ S K G A VEFS ++EA LE L
Sbjct: 135 EDVQSFFAQYAKVNSVRLPRHISNKKHFCGTALVEFSEEDEAKIVLENNL 184
Score = 41.2 bits (95), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 17/82 (20%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHD------------PDDVV 48
+EFY SDSNL +D+F + +++ + VS+ L C+ AR+ P++ V
Sbjct: 22 VEFYFSDSNLPRDKFLRETVEQREDGLVSLALICS-FARMKSHLGLDAAVKPETVPEETV 80
Query: 49 KA----LRKSKLLEVTEDGTKV 66
A LR+S++L ++EDG V
Sbjct: 81 LAVAEVLRRSQMLRISEDGKMV 102
>gi|10177706|dbj|BAB11080.1| unnamed protein product [Arabidopsis thaliana]
Length = 411
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 83/161 (51%), Gaps = 14/161 (8%)
Query: 108 QLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVK 165
+L Q+I+ +E+Y SD NL D+F ++ + + + +S +K+ +LT D +V
Sbjct: 91 ELNQKIIRQVEYYFSDENLPTDKFLLNAMKRNKKGFVPISTIATFHKMKKLTRDHALIVS 150
Query: 166 ALRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTY 225
AL++S L V+ D KV+R + + D T+ VE LP + ++ I +F K G +
Sbjct: 151 ALKESSFLVVSADEKKVKRLSPLPEIRDPKIFTVLVENLPEDHSNENIREIFGKAGSIKS 210
Query: 226 VSL------PKFKSTGKLKGF------AFVEFSTKEEAAKA 254
VS+ + + GK + F AFVE+ T E A KA
Sbjct: 211 VSICDPNAVEESEKGGKKENFIRTRLHAFVEYETVEAAEKA 251
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
+E+Y SD NL D+F ++ + + + +S +K+ +LT D +V AL++S L
Sbjct: 100 VEYYFSDENLPTDKFLLNAMKRNKKGFVPISTIATFHKMKKLTRDHALIVSALKESSFLV 159
Query: 59 VTEDGTKVK 67
V+ D KVK
Sbjct: 160 VSADEKKVK 168
>gi|395857009|ref|XP_003800907.1| PREDICTED: lupus La protein [Otolemur garnettii]
Length = 405
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 88/168 (52%), Gaps = 11/168 (6%)
Query: 99 DGGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLT 157
+ G + L +I + +E+Y D NL +D+F + ++ + + + + +K N+L RLT
Sbjct: 3 ENGDNEKMAALEAKICHQIEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLT 62
Query: 158 HDPDDVVKALRKSK--LLEVTEDGTKVRRT-------VVVQDKPDVDECTIYVEKLPPEA 208
D + +V+AL KSK L+E++ED TK+RR+ V + K DV ++Y++ P +A
Sbjct: 63 TDFNVIVEALSKSKAELMEISEDKTKIRRSPTKPLPEVTDEYKNDVKNRSVYIKGFPTDA 122
Query: 209 EHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
D I+ G+V + + + KG F F + E A K +E
Sbjct: 123 TLDDIKEWLEDKGQVLNIQMRRTLHKA-FKGSIFAVFDSIESAKKFVE 169
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 47/70 (67%), Gaps = 3/70 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--LL 57
+E+Y D NL +D+F + ++ + + + + +K N+L RLT D + +V+AL KSK L+
Sbjct: 21 IEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLTTDFNVIVEALSKSKAELM 80
Query: 58 EVTEDGTKVK 67
E++ED TK++
Sbjct: 81 EISEDKTKIR 90
>gi|198457355|ref|XP_002136256.1| GA27854 [Drosophila pseudoobscura pseudoobscura]
gi|198142562|gb|EDY71295.1| GA27854 [Drosophila pseudoobscura pseudoobscura]
Length = 184
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 50/83 (60%)
Query: 117 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEVT 176
MEFY D+NL KDRF + + + P + + +FL NK+ L D + KAL S+LLE+
Sbjct: 1 MEFYFGDANLTKDRFLRRYVDQDPYVPLEIFLTFNKMKPLAEDVKQIAKALNNSQLLELD 60
Query: 177 EDGTKVRRTVVVQDKPDVDECTI 199
E KVRR + D+ DV++ T+
Sbjct: 61 ESALKVRRKTKMPDQRDVNDKTL 83
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 40/67 (59%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEVT 60
MEFY D+NL KDRF + + + P + + +FL NK+ L D + KAL S+LLE+
Sbjct: 1 MEFYFGDANLTKDRFLRRYVDQDPYVPLEIFLTFNKMKPLAEDVKQIAKALNNSQLLELD 60
Query: 61 EDGTKVK 67
E KV+
Sbjct: 61 ESALKVR 67
>gi|143811414|sp|P10881.2|LA_BOVIN RecName: Full=Lupus La protein homolog; AltName: Full=La
autoantigen homolog; AltName: Full=La ribonucleoprotein
gi|73587420|gb|AAI03235.1| Sjogren syndrome antigen B (autoantigen La) [Bos taurus]
gi|296490691|tpg|DAA32804.1| TPA: lupus La protein homolog [Bos taurus]
gi|440912806|gb|ELR62341.1| Lupus La protein-like protein [Bos grunniens mutus]
Length = 404
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 88/168 (52%), Gaps = 11/168 (6%)
Query: 99 DGGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLT 157
+ G + L +I + +E+Y D NL +D+F + ++ + + + + +K N+L RLT
Sbjct: 3 ENGDNEKMAALEAKICHQIEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLT 62
Query: 158 HDPDDVVKALRKSK--LLEVTEDGTKVRRT-------VVVQDKPDVDECTIYVEKLPPEA 208
D + +V+AL KSK L+E++ED TK+RR+ V + K DV ++Y++ P +A
Sbjct: 63 TDFNVIVEALSKSKAELMEISEDKTKIRRSPSKPLPEVTDEYKNDVKNRSVYIKGFPTDA 122
Query: 209 EHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
D I+ G+V + + + KG F F + E A K +E
Sbjct: 123 ALDDIKEWLEDKGQVLNIQMRRTLHKA-FKGSIFAVFDSIESAKKFVE 169
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 47/70 (67%), Gaps = 3/70 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--LL 57
+E+Y D NL +D+F + ++ + + + + +K N+L RLT D + +V+AL KSK L+
Sbjct: 21 IEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLTTDFNVIVEALSKSKAELM 80
Query: 58 EVTEDGTKVK 67
E++ED TK++
Sbjct: 81 EISEDKTKIR 90
>gi|149730710|ref|XP_001497943.1| PREDICTED: lupus La protein homolog isoform 1 [Equus caballus]
gi|335775927|gb|AEH58735.1| lupus La protein-like protein [Equus caballus]
Length = 405
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 88/168 (52%), Gaps = 11/168 (6%)
Query: 99 DGGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLT 157
+ G + L +I + +E+Y D NL +D+F + ++ + + + + +K N+L RLT
Sbjct: 3 ENGDNEKMAALEAKICHQIEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLT 62
Query: 158 HDPDDVVKALRKSK--LLEVTEDGTKVRRT-------VVVQDKPDVDECTIYVEKLPPEA 208
D + +V+AL KSK L+E++ED TK+RR+ V + K DV ++Y++ P +A
Sbjct: 63 TDFNVIVEALSKSKAELMEISEDKTKIRRSPSKPLPEVTDEYKNDVKNRSVYIKGFPTDA 122
Query: 209 EHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
D I+ G+V + + + KG F F + E A K +E
Sbjct: 123 TLDDIKEWLEDKGQVLNIQMRRTLHKA-FKGSIFAVFDSIESAKKFVE 169
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 47/70 (67%), Gaps = 3/70 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--LL 57
+E+Y D NL +D+F + ++ + + + + +K N+L RLT D + +V+AL KSK L+
Sbjct: 21 IEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLTTDFNVIVEALSKSKAELM 80
Query: 58 EVTEDGTKVK 67
E++ED TK++
Sbjct: 81 EISEDKTKIR 90
>gi|224143006|ref|XP_002324815.1| predicted protein [Populus trichocarpa]
gi|222866249|gb|EEF03380.1| predicted protein [Populus trichocarpa]
Length = 191
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 88/169 (52%), Gaps = 21/169 (12%)
Query: 111 QQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN------KLARLTHDPDD-- 162
++++ +E+Y SDSN+ +D F +++ S + VS+ L C+ L + P++
Sbjct: 12 KEVLRQVEYYFSDSNIPRDNFLRNIIESSEDGMVSLALICSFKKMKGHLKLMDVKPEEIP 71
Query: 163 ------VVKALRKSKLLEVTEDGTKVRRTVVVQDKPD-----VDECTIYVEKLPPEAEHD 211
V + LRKS L+V+EDG KV R + KPD +D TI L + +
Sbjct: 72 EVTVQAVAETLRKSTSLKVSEDGKKVGRIAGIL-KPDEAIEQLDVRTIAASPLKYNVKRE 130
Query: 212 YIESVFSKYGKVTYVSLPKFKSTGKL-KGFAFVEFSTKEEAAKALELGL 259
+ES F ++ KVT V +P+ S ++ G A +EFS +EEA L+ L
Sbjct: 131 ELESFFGQHAKVTSVRMPRHVSDKRVFCGTALIEFSLEEEAENILKQSL 179
Score = 41.2 bits (95), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 14/80 (17%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN------KLARLTHDPDD-------- 46
+E+Y SDSN+ +D F +++ S + VS+ L C+ L + P++
Sbjct: 18 VEYYFSDSNIPRDNFLRNIIESSEDGMVSLALICSFKKMKGHLKLMDVKPEEIPEVTVQA 77
Query: 47 VVKALRKSKLLEVTEDGTKV 66
V + LRKS L+V+EDG KV
Sbjct: 78 VAETLRKSTSLKVSEDGKKV 97
>gi|431894891|gb|ELK04684.1| Lupus La protein like protein [Pteropus alecto]
Length = 478
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 87/165 (52%), Gaps = 11/165 (6%)
Query: 102 GRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDP 160
G + L +I + +E+Y D NL +D+F + ++ + + + + +K N+L RLT D
Sbjct: 79 GDEKMAALEAKICHQIEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLTTDF 138
Query: 161 DDVVKALRKSK--LLEVTEDGTKVRRT-------VVVQDKPDVDECTIYVEKLPPEAEHD 211
+ +V+AL KSK L+E++ED TK+RR+ V + K DV ++Y++ P +A D
Sbjct: 139 NVIVEALSKSKAELMEISEDKTKIRRSPNKPLPEVTDEYKNDVKNRSVYIKGFPTDATLD 198
Query: 212 YIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
I+ G+V + + + KG F F + E A K +E
Sbjct: 199 DIKEWLEDKGQVLNIQMRRTLHKA-FKGSIFAVFDSIESAKKFVE 242
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 47/70 (67%), Gaps = 3/70 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--LL 57
+E+Y D NL +D+F + ++ + + + + +K N+L RLT D + +V+AL KSK L+
Sbjct: 94 IEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLTTDFNVIVEALSKSKAELM 153
Query: 58 EVTEDGTKVK 67
E++ED TK++
Sbjct: 154 EISEDKTKIR 163
>gi|302755224|ref|XP_002961036.1| hypothetical protein SELMODRAFT_70782 [Selaginella moellendorffii]
gi|300171975|gb|EFJ38575.1| hypothetical protein SELMODRAFT_70782 [Selaginella moellendorffii]
Length = 329
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 85/164 (51%), Gaps = 20/164 (12%)
Query: 117 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN--------KLARLTHD--PDDVVKA 166
+EFY SDSNL D F + ++ES + VS+ + C +L++ T + P VV A
Sbjct: 2 VEFYFSDSNLANDAFLLRSIEESADGLVSLSVICAFTRMRFHLRLSQTTPETIPKGVVAA 61
Query: 167 ----LRKSKLLEVTEDGTKVRRTVVVQ-DKPD-----VDECTIYVEKLPPEAEHDYIESV 216
LRKS L+V++DG +R V + KP+ VD ++ V + + IE+
Sbjct: 62 VADVLRKSSFLKVSDDGMCLRVGRVHEMQKPEEVRAEVDARSLAVSPFSWKTTREEIEAF 121
Query: 217 FSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLN 260
F K+ V +P+ + G+A VEF++ EEA +A +GLN
Sbjct: 122 FESNCKILSVRVPRHPAVKAFSGYAIVEFASPEEAQRASGMGLN 165
Score = 40.8 bits (94), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 14/97 (14%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN--------KLARLTHD--PDDVVKA 50
+EFY SDSNL D F + ++ES + VS+ + C +L++ T + P VV A
Sbjct: 2 VEFYFSDSNLANDAFLLRSIEESADGLVSLSVICAFTRMRFHLRLSQTTPETIPKGVVAA 61
Query: 51 ----LRKSKLLEVTEDGTKVKGNIIRHFLVPISMETE 83
LRKS L+V++DG ++ + P + E
Sbjct: 62 VADVLRKSSFLKVSDDGMCLRVGRVHEMQKPEEVRAE 98
>gi|449465127|ref|XP_004150280.1| PREDICTED: uncharacterized protein LOC101204162 [Cucumis sativus]
gi|449511730|ref|XP_004164038.1| PREDICTED: uncharacterized protein LOC101224341 [Cucumis sativus]
Length = 469
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 94/175 (53%), Gaps = 24/175 (13%)
Query: 107 KQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLAR------LTHD- 159
+++ ++++ +EFY SDSNL +D F + + ESP+ V + L C +R L D
Sbjct: 8 QEMAKKVLRQVEFYFSDSNLPRDTFLRKTISESPDGLVDLSLICT-FSRMKGHLELKQDV 66
Query: 160 -----PDDVVKA----LRKSKLLEVTEDGTKVRRTVVVQDKPD-----VDECTIYVEKLP 205
P+D +KA LR S L+V+EDG KV R + KP+ +D+ T+
Sbjct: 67 TPENFPEDTMKAVAETLRTSSSLKVSEDGKKVGRATELP-KPEELIEQLDDRTVAASPFE 125
Query: 206 PEAEHDYIESVFSKYGKVTYVSLPKFKSTGKL-KGFAFVEFSTKEEAAKALELGL 259
+ + + +E+ F++ KV V LP+ + ++ G A +EFST+E+A K L+ L
Sbjct: 126 YDIKLEDVEAFFNQVTKVNSVRLPRHVADKRVFCGTALIEFSTEEDAEKVLKESL 180
Score = 44.7 bits (104), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 44/82 (53%), Gaps = 17/82 (20%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLAR------LTHD------PDDVV 48
+EFY SDSNL +D F + + ESP+ V + L C +R L D P+D +
Sbjct: 18 VEFYFSDSNLPRDTFLRKTISESPDGLVDLSLICT-FSRMKGHLELKQDVTPENFPEDTM 76
Query: 49 KA----LRKSKLLEVTEDGTKV 66
KA LR S L+V+EDG KV
Sbjct: 77 KAVAETLRTSSSLKVSEDGKKV 98
>gi|343961187|dbj|BAK62183.1| lupus La protein [Pan troglodytes]
Length = 408
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 89/168 (52%), Gaps = 11/168 (6%)
Query: 99 DGGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLT 157
+ G + L +I + +E+Y D NL +D+F + ++ + + + + +K N+L RLT
Sbjct: 3 ENGDNEKMAALEAKICHQIEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLT 62
Query: 158 HDPDDVVKALRKSK--LLEVTEDGTKVRRT-------VVVQDKPDVDECTIYVEKLPPEA 208
D + +V+AL KSK L+E++ED TK+RR+ V + K DV ++Y++ P +A
Sbjct: 63 TDFNVIVEALSKSKAELMEISEDKTKIRRSPSKPLPEVTDEYKNDVKNRSVYIKGFPTDA 122
Query: 209 EHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
D I+ G+V + + + KG FV F + E A K +E
Sbjct: 123 TLDDIKEWLEDKGQVLNIQM-RGTLHKAFKGSIFVVFDSIESAKKFVE 169
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 47/70 (67%), Gaps = 3/70 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--LL 57
+E+Y D NL +D+F + ++ + + + + +K N+L RLT D + +V+AL KSK L+
Sbjct: 21 IEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLTTDFNVIVEALSKSKAELM 80
Query: 58 EVTEDGTKVK 67
E++ED TK++
Sbjct: 81 EISEDKTKIR 90
>gi|88191927|pdb|1ZH5|A Chain A, Structural Basis For Recognition Of Uuuoh 3'-Terminii Of
Nascent Rna Pol Iii Transcripts By La Autoantigen
gi|88191928|pdb|1ZH5|B Chain B, Structural Basis For Recognition Of Uuuoh 3'-Terminii Of
Nascent Rna Pol Iii Transcripts By La Autoantigen
Length = 195
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 87/168 (51%), Gaps = 11/168 (6%)
Query: 99 DGGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLT 157
+ G + L +I + +E+Y D NL +D+F + ++ + + + + +K N+L RLT
Sbjct: 4 ENGDNEKXAALEAKICHQIEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIXIKFNRLNRLT 63
Query: 158 HDPDDVVKALRKSK--LLEVTEDGTKVRRT-------VVVQDKPDVDECTIYVEKLPPEA 208
D + +V+AL KSK L E++ED TK+RR+ V + K DV ++Y++ P +A
Sbjct: 64 TDFNVIVEALSKSKAELXEISEDKTKIRRSPSKPLPEVTDEYKNDVKNRSVYIKGFPTDA 123
Query: 209 EHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
D I+ G+V + + KG FV F + E A K +E
Sbjct: 124 TLDDIKEWLEDKGQVLNIQXRRTLHKA-FKGSIFVVFDSIESAKKFVE 170
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 46/70 (65%), Gaps = 3/70 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--LL 57
+E+Y D NL +D+F + ++ + + + + +K N+L RLT D + +V+AL KSK L
Sbjct: 22 IEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIXIKFNRLNRLTTDFNVIVEALSKSKAELX 81
Query: 58 EVTEDGTKVK 67
E++ED TK++
Sbjct: 82 EISEDKTKIR 91
>gi|417400320|gb|JAA47114.1| Putative rna-binding protein la [Desmodus rotundus]
Length = 404
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 87/165 (52%), Gaps = 11/165 (6%)
Query: 102 GRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDP 160
G + L +I + +E+Y D NL +D+F + ++ + + + + +K N+L RLT D
Sbjct: 5 GDEKMAALEAKICHQIEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLTTDF 64
Query: 161 DDVVKALRKSK--LLEVTEDGTKVRRT-------VVVQDKPDVDECTIYVEKLPPEAEHD 211
+ +V+AL KSK L+E++ED TK+RR+ V + K DV ++Y++ P +A D
Sbjct: 65 NVIVEALSKSKAELMEISEDKTKIRRSPNKPLPEVTDEYKNDVKNRSVYIKGFPTDATLD 124
Query: 212 YIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
I+ G+V + + + KG F F + E A K +E
Sbjct: 125 DIKEWLEDKGQVLNIQMRRTLHKA-FKGSIFAVFDSIESAKKFVE 168
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 47/70 (67%), Gaps = 3/70 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--LL 57
+E+Y D NL +D+F + ++ + + + + +K N+L RLT D + +V+AL KSK L+
Sbjct: 20 IEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLTTDFNVIVEALSKSKAELM 79
Query: 58 EVTEDGTKVK 67
E++ED TK++
Sbjct: 80 EISEDKTKIR 89
>gi|432098397|gb|ELK28197.1| Lupus La protein [Myotis davidii]
Length = 404
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 87/165 (52%), Gaps = 11/165 (6%)
Query: 102 GRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDP 160
G + L +I + +E+Y D NL +D+F + ++ + + + + +K N+L RLT D
Sbjct: 5 GDEKMAALEAKICHQIEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLTTDF 64
Query: 161 DDVVKALRKSK--LLEVTEDGTKVRRT-------VVVQDKPDVDECTIYVEKLPPEAEHD 211
+ +V+AL KSK L+E++ED TK+RR+ V + K DV ++Y++ P +A D
Sbjct: 65 NVIVEALSKSKVELMEISEDKTKIRRSPNKPLPEVTDEYKNDVKNRSVYIKGFPTDATLD 124
Query: 212 YIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
I+ G+V + + + KG F F + E A K +E
Sbjct: 125 DIKEWLEDKGQVLNIQMRRTLHKA-FKGSIFAVFDSIESAKKFVE 168
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 47/70 (67%), Gaps = 3/70 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--LL 57
+E+Y D NL +D+F + ++ + + + + +K N+L RLT D + +V+AL KSK L+
Sbjct: 20 IEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLTTDFNVIVEALSKSKVELM 79
Query: 58 EVTEDGTKVK 67
E++ED TK++
Sbjct: 80 EISEDKTKIR 89
>gi|88191895|pdb|1YTY|A Chain A, Structural Basis For Recognition Of Uuuoh 3'-Terminii Of
Nascent Rna Pol Iii Transcripts By La Autoantigen
gi|88191896|pdb|1YTY|B Chain B, Structural Basis For Recognition Of Uuuoh 3'-Terminii Of
Nascent Rna Pol Iii Transcripts By La Autoantigen
Length = 194
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 87/168 (51%), Gaps = 11/168 (6%)
Query: 99 DGGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLT 157
+ G + L +I + +E+Y D NL +D+F + ++ + + + + +K N+L RLT
Sbjct: 3 ENGDNEKXAALEAKICHQIEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIXIKFNRLNRLT 62
Query: 158 HDPDDVVKALRKSK--LLEVTEDGTKVRRT-------VVVQDKPDVDECTIYVEKLPPEA 208
D + +V+AL KSK L E++ED TK+RR+ V + K DV ++Y++ P +A
Sbjct: 63 TDFNVIVEALSKSKAELXEISEDKTKIRRSPSKPLPEVTDEYKNDVKNRSVYIKGFPTDA 122
Query: 209 EHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
D I+ G+V + + KG FV F + E A K +E
Sbjct: 123 TLDDIKEWLEDKGQVLNIQXRRTLHKA-FKGSIFVVFDSIESAKKFVE 169
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 46/70 (65%), Gaps = 3/70 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--LL 57
+E+Y D NL +D+F + ++ + + + + +K N+L RLT D + +V+AL KSK L
Sbjct: 21 IEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIXIKFNRLNRLTTDFNVIVEALSKSKAELX 80
Query: 58 EVTEDGTKVK 67
E++ED TK++
Sbjct: 81 EISEDKTKIR 90
>gi|348585869|ref|XP_003478693.1| PREDICTED: lupus La protein-like [Cavia porcellus]
Length = 405
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 88/168 (52%), Gaps = 11/168 (6%)
Query: 99 DGGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLT 157
+ G + L +I + +E+Y D NL +D+F + ++ + + + + +K N+L RLT
Sbjct: 3 ENGDNEKMAALEAKICHQIEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLT 62
Query: 158 HDPDDVVKALRKSK--LLEVTEDGTKVRRT-------VVVQDKPDVDECTIYVEKLPPEA 208
D + +V+AL KSK L+E++ED TK+RR+ V + K DV ++Y++ P +A
Sbjct: 63 TDFNVIVEALSKSKAELMEISEDKTKIRRSPNKPLPEVTDEYKNDVKNRSVYIKGFPTDA 122
Query: 209 EHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
D I+ G+V + + + KG F F + E A K +E
Sbjct: 123 TLDDIKEWLEDKGQVLNIQMRRTLHKA-FKGSIFAVFDSIESAKKFVE 169
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 47/70 (67%), Gaps = 3/70 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--LL 57
+E+Y D NL +D+F + ++ + + + + +K N+L RLT D + +V+AL KSK L+
Sbjct: 21 IEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLTTDFNVIVEALSKSKAELM 80
Query: 58 EVTEDGTKVK 67
E++ED TK++
Sbjct: 81 EISEDKTKIR 90
>gi|281202549|gb|EFA76751.1| hypothetical protein PPL_09502 [Polysphondylium pallidum PN500]
Length = 459
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 87/169 (51%), Gaps = 27/169 (15%)
Query: 113 IMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDP-DDVVKA--- 166
I+ +E+Y SDSNL KD++ ++ + S + I + + L NKL + ++ +KA
Sbjct: 13 IVEQLEYYFSDSNLLKDKYMNKQVHHSNDGWIGIDILLTFNKLHLMLEKVLNEHIKAKQN 72
Query: 167 ----------------LRKSKLLEVTEDGTKVRRT--VVVQDK--PDVDECTIYVEKLPP 206
++S+LL ++ +++R + D VDE TIY+E +P
Sbjct: 73 DISVKDVLITILLHNRFKESQLLVANDEANEIKRRHPFIASDDLIRTVDEKTIYIEPVPE 132
Query: 207 EAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKAL 255
++ + ++FS+ G + VS+P+F + KGFAF+EF KE A A+
Sbjct: 133 NMTNEELIALFSELGSIENVSIPRFPD-KRAKGFAFIEFKEKENAINAI 180
>gi|33521200|gb|AAQ21362.1| telomerase associated protein p65 [Tetrahymena thermophila]
Length = 542
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 97/205 (47%), Gaps = 45/205 (21%)
Query: 117 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDD------------ 162
ME+Y D+NL D + ++ +SP+ +++ VFLK NK+ ++ D
Sbjct: 126 MEYYFCDTNLTHDSYLRGIISKSPKNCVDIKVFLKFNKIQQILKQIQDKQIVSTYGIENQ 185
Query: 163 ------------------------VVKALRKSKLLEVTEDGTKVRRTV---VVQDKPDVD 195
+ +L++SK+L+V D KV+R + Q +
Sbjct: 186 SQKKNHKNYKNQNATFSKKDLIHLIRDSLKESKILKVKMDSLKVKRRFPFNLEQALKNSK 245
Query: 196 ECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKAL 255
+ T+Y++ LPP+ + S+F + ++ ++LP K++ +GFAF+EF ++EEA +AL
Sbjct: 246 QRTLYIDFLPPKCSKQTLVSIFGNF-RIININLPLQKNSQLCQGFAFIEFFSEEEANQAL 304
Query: 256 ELGLNPCPPDYQSSILTTTSRLSFG 280
+ P + IL T ++ G
Sbjct: 305 ITKNSSIPKEL---ILLTEKKIGQG 326
>gi|125540248|gb|EAY86643.1| hypothetical protein OsI_08024 [Oryza sativa Indica Group]
Length = 467
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 89/170 (52%), Gaps = 22/170 (12%)
Query: 111 QQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHD----------- 159
+ ++ +EFY SDSNL +D+F + +++ + VS+ L C+ AR+
Sbjct: 16 KSVLRQVEFYFSDSNLPRDKFLRETVEQREDGLVSLALICS-FARMKSHLGLDAAVKPET 74
Query: 160 -PDDVVKA----LRKSKLLEVTEDGTKVRRT--VVVQDK--PDVDECTIYVEKLPPEAEH 210
P++ V A LR+S++L ++EDG V R ++ D+ VD T+ LP +
Sbjct: 75 VPEETVLAVAEVLRRSQMLRISEDGKMVGRASELLKADEIIKQVDSRTVAASPLPYNVKL 134
Query: 211 DYIESVFSKYGKVTYVSLPKFKSTGK-LKGFAFVEFSTKEEAAKALELGL 259
+ ++S F++Y KV V LP+ + K G A VEFS ++EA LE L
Sbjct: 135 EDVQSFFAQYAKVNSVRLPRHIANKKHFCGTALVEFSEEDEAKIVLENNL 184
Score = 41.2 bits (95), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 17/82 (20%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHD------------PDDVV 48
+EFY SDSNL +D+F + +++ + VS+ L C+ AR+ P++ V
Sbjct: 22 VEFYFSDSNLPRDKFLRETVEQREDGLVSLALICS-FARMKSHLGLDAAVKPETVPEETV 80
Query: 49 KA----LRKSKLLEVTEDGTKV 66
A LR+S++L ++EDG V
Sbjct: 81 LAVAEVLRRSQMLRISEDGKMV 102
>gi|195117722|ref|XP_002003396.1| GI17890 [Drosophila mojavensis]
gi|193913971|gb|EDW12838.1| GI17890 [Drosophila mojavensis]
Length = 390
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 83/159 (52%), Gaps = 15/159 (9%)
Query: 113 IMNLMEFYLSDSNLRKDRFFSQLL--QESPEIEVSVFLKCNKLARLTHDPDDVVKALRKS 170
I+ +E+Y D+NL +D+F S+ + E + +SV + +LA L+ D +++V AL KS
Sbjct: 54 IIRQVEYYFGDANLHRDKFLSEQITKNEGGWVPLSVLVTFKRLASLSTDFEEIVNALNKS 113
Query: 171 K--LLEVTEDGTKVRR-------TVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYG 221
L+EV+ED VRR + + ++ E T+Y + P E++ I S Y
Sbjct: 114 DEGLVEVSEDKQSVRRHPERPVPEHNEERRKEIQERTVYAKGFPLESQMSEILDFVSPYD 173
Query: 222 KVTYVSLPKF----KSTGKLKGFAFVEFSTKEEAAKALE 256
KV V++ K + K KG FV F KE+A + LE
Sbjct: 174 KVVNVTMRKHYDKPTKSYKFKGSIFVTFEKKEQAKEFLE 212
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 1 MEFYLSDSNLRKDRFFSQLL--QESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--L 56
+E+Y D+NL +D+F S+ + E + +SV + +LA L+ D +++V AL KS L
Sbjct: 58 VEYYFGDANLHRDKFLSEQITKNEGGWVPLSVLVTFKRLASLSTDFEEIVNALNKSDEGL 117
Query: 57 LEVTEDGTKVKGNIIRHFLVPISMETE 83
+EV+ED K ++ RH P+ E
Sbjct: 118 VEVSED----KQSVRRHPERPVPEHNE 140
>gi|410896814|ref|XP_003961894.1| PREDICTED: lupus La protein homolog [Takifugu rubripes]
Length = 396
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 84/158 (53%), Gaps = 17/158 (10%)
Query: 112 QIMNLMEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKALRKS 170
+++ +E+Y D NL +D+F + +Q + + + LK N+L LT + +V AL+KS
Sbjct: 14 KVVRQIEYYFGDHNLPRDKFLKEQIQLDDGWVTLETMLKFNRLKTLTTESSFIVAALQKS 73
Query: 171 K--LLEVTEDGTKVRRTVVVQDKP----------DVDECTIYVEKLPPEAEHDYIESVFS 218
K LLE++ED TK+RR++ DKP + ++Y++ P E+ D I+ S
Sbjct: 74 KTGLLEISEDKTKIRRSL---DKPLPEINDDYKDALKHKSVYIKGFPLESTLDEIQEWLS 130
Query: 219 KYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
G + + + K K KG F+ F T+E + + LE
Sbjct: 131 GKGNIENIQMRKTLQK-KFKGSVFICFDTEESSKQFLE 167
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 44/70 (62%), Gaps = 3/70 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--LL 57
+E+Y D NL +D+F + +Q + + + LK N+L LT + +V AL+KSK LL
Sbjct: 19 IEYYFGDHNLPRDKFLKEQIQLDDGWVTLETMLKFNRLKTLTTESSFIVAALQKSKTGLL 78
Query: 58 EVTEDGTKVK 67
E++ED TK++
Sbjct: 79 EISEDKTKIR 88
>gi|340056848|emb|CCC51187.1| RNA-binding protein [Trypanosoma vivax Y486]
Length = 329
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 71/148 (47%), Gaps = 8/148 (5%)
Query: 112 QIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRK 169
++ +EFY SD N++KD F + E E + + L N++ T D ++ ALR
Sbjct: 10 KLQRQVEFYFSDVNIQKDVFLKAKMAEHVEGFVPLETILTFNRVNAHTRDAKELADALRP 69
Query: 170 SKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLP 229
S+ L ++EDG VRR + + D T+YV LPP A + + F K+G V V
Sbjct: 70 SEKLVLSEDGLMVRRKDPLPESIQTDAQTVYVRPLPPTATLEELTEFFGKHGSVQAVWRR 129
Query: 230 KFKST------GKLKGFAFVEFSTKEEA 251
F + K FV FST EEA
Sbjct: 130 YFPGKKDAPPESRTKPSVFVVFSTVEEA 157
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 6/86 (6%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
+EFY SD N++KD F + E E + + L N++ T D ++ ALR S+ L
Sbjct: 15 VEFYFSDVNIQKDVFLKAKMAEHVEGFVPLETILTFNRVNAHTRDAKELADALRPSEKLV 74
Query: 59 VTEDGTKVKGNIIRHFLVPISMETEA 84
++EDG V+ R +P S++T+A
Sbjct: 75 LSEDGLMVR----RKDPLPESIQTDA 96
>gi|126314950|ref|XP_001364499.1| PREDICTED: lupus La protein homolog [Monodelphis domestica]
Length = 404
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 86/168 (51%), Gaps = 11/168 (6%)
Query: 99 DGGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLT 157
+ G + L +I +E+Y D NL +D+F + ++ + + + + +K N+L++LT
Sbjct: 3 ENGDSEKMTDLESKICQQIEYYFGDFNLPRDKFLKEQIKIDDGWVPLEIMIKFNRLSKLT 62
Query: 158 HDPDDVVKALRKSK--LLEVTEDGTKVRR-------TVVVQDKPDVDECTIYVEKLPPEA 208
D D + AL+KSK L+EV+ED TK+RR V + K +V +IYV+ P +A
Sbjct: 63 KDFDVIRSALKKSKAELMEVSEDKTKIRRFPSKPLPEVTDEYKNEVKNKSIYVKGFPTDA 122
Query: 209 EHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
D I+ G+V + + + KG F F + E A K +E
Sbjct: 123 TLDDIKEWLEGKGQVQNIQMRQTLHKA-FKGSIFAVFDSVESAKKFIE 169
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 47/70 (67%), Gaps = 3/70 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--LL 57
+E+Y D NL +D+F + ++ + + + + +K N+L++LT D D + AL+KSK L+
Sbjct: 21 IEYYFGDFNLPRDKFLKEQIKIDDGWVPLEIMIKFNRLSKLTKDFDVIRSALKKSKAELM 80
Query: 58 EVTEDGTKVK 67
EV+ED TK++
Sbjct: 81 EVSEDKTKIR 90
>gi|355721968|gb|AES07432.1| Sjogren syndrome antigen B [Mustela putorius furo]
Length = 404
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 86/165 (52%), Gaps = 11/165 (6%)
Query: 99 DGGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLT 157
+ G + L +I + +E+Y D NL +D+F + ++ + + + + +K N+L RLT
Sbjct: 3 ENGDNEKMAALEAKICHQIEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLT 62
Query: 158 HDPDDVVKALRKSK--LLEVTEDGTKVRRT-------VVVQDKPDVDECTIYVEKLPPEA 208
D + +V+AL KSK L+E++ED TK+RR+ V + K DV ++Y++ P +A
Sbjct: 63 TDFNVIVEALSKSKAELMEISEDKTKIRRSPSKPLPEVTDEYKNDVKNRSVYIKGFPTDA 122
Query: 209 EHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAK 253
D I+ G+V + + + KG F F + E A K
Sbjct: 123 TLDDIKEWLEDKGQVLNIQMRRTLHKA-FKGSIFAVFDSIESAKK 166
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 47/70 (67%), Gaps = 3/70 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--LL 57
+E+Y D NL +D+F + ++ + + + + +K N+L RLT D + +V+AL KSK L+
Sbjct: 21 IEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLTTDFNVIVEALSKSKAELM 80
Query: 58 EVTEDGTKVK 67
E++ED TK++
Sbjct: 81 EISEDKTKIR 90
>gi|301762260|ref|XP_002916547.1| PREDICTED: lupus La protein homolog [Ailuropoda melanoleuca]
Length = 406
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 86/165 (52%), Gaps = 11/165 (6%)
Query: 99 DGGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLT 157
+ G + L +I + +E+Y D NL +D+F + ++ + + + + +K N+L RLT
Sbjct: 3 ENGDNEKMAALEAKICHQIEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLT 62
Query: 158 HDPDDVVKALRKSK--LLEVTEDGTKVRRT-------VVVQDKPDVDECTIYVEKLPPEA 208
D + +V+AL KSK L+E++ED TK+RR+ V + K DV ++Y++ P +A
Sbjct: 63 TDFNIIVEALSKSKAELMEISEDKTKIRRSPSKPLPEVTDEYKNDVKNRSVYIKGFPTDA 122
Query: 209 EHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAK 253
D I+ G+V + + + KG F F + E A K
Sbjct: 123 TLDDIKEWLEDKGQVLNIQMRRTLHKA-FKGSIFAVFDSIESAKK 166
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 47/70 (67%), Gaps = 3/70 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--LL 57
+E+Y D NL +D+F + ++ + + + + +K N+L RLT D + +V+AL KSK L+
Sbjct: 21 IEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLTTDFNIIVEALSKSKAELM 80
Query: 58 EVTEDGTKVK 67
E++ED TK++
Sbjct: 81 EISEDKTKIR 90
>gi|330790193|ref|XP_003283182.1| hypothetical protein DICPUDRAFT_52105 [Dictyostelium purpureum]
gi|325086863|gb|EGC40246.1| hypothetical protein DICPUDRAFT_52105 [Dictyostelium purpureum]
Length = 354
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 82/147 (55%), Gaps = 4/147 (2%)
Query: 111 QQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALR 168
QI+ +E+Y SDSNL +D+F + L ++ + + + + N++ ++ D + + ++L+
Sbjct: 11 NQILKQVEYYFSDSNLLRDKFLKEELAKNVDGYVSIEIIASFNRMKAISTDLEFITESLK 70
Query: 169 KSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSL 228
KS L+V+EDG V+R + + D + T+Y + P + + ++ F+++GK V L
Sbjct: 71 KSTRLQVSEDGKMVKRLDPLPESIDTGK-TLYSKGWPSDTTIEKVQEFFNQFGKTLSVRL 129
Query: 229 PKFKSTGKLKGFAFVEFSTKEEAAKAL 255
K K+ KG V+F T+E K +
Sbjct: 130 RK-KTDKSFKGSLLVDFDTEETVTKII 155
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 44/69 (63%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
+E+Y SDSNL +D+F + L ++ + + + + N++ ++ D + + ++L+KS L+
Sbjct: 17 VEYYFSDSNLLRDKFLKEELAKNVDGYVSIEIIASFNRMKAISTDLEFITESLKKSTRLQ 76
Query: 59 VTEDGTKVK 67
V+EDG VK
Sbjct: 77 VSEDGKMVK 85
>gi|74004835|ref|XP_535952.2| PREDICTED: lupus La protein homolog [Canis lupus familiaris]
Length = 406
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 86/165 (52%), Gaps = 11/165 (6%)
Query: 99 DGGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLT 157
+ G + L +I + +E+Y D NL +D+F + ++ + + + + +K N+L RLT
Sbjct: 3 ENGDNEKMAALEAKICHQIEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLT 62
Query: 158 HDPDDVVKALRKSK--LLEVTEDGTKVRRT-------VVVQDKPDVDECTIYVEKLPPEA 208
D + +V+AL KSK L+E++ED TK+RR+ V + K DV ++Y++ P +A
Sbjct: 63 TDFNVIVEALSKSKAELMEISEDKTKIRRSPSKPLPEVTDEYKNDVKNRSVYIKGFPTDA 122
Query: 209 EHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAK 253
D I+ G+V + + + KG F F + E A K
Sbjct: 123 TLDDIKEWLEDKGQVLNIQMRRTLHKA-FKGSIFAVFDSIESARK 166
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 47/70 (67%), Gaps = 3/70 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--LL 57
+E+Y D NL +D+F + ++ + + + + +K N+L RLT D + +V+AL KSK L+
Sbjct: 21 IEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLTTDFNVIVEALSKSKAELM 80
Query: 58 EVTEDGTKVK 67
E++ED TK++
Sbjct: 81 EISEDKTKIR 90
>gi|351714991|gb|EHB17910.1| Lupus La protein [Heterocephalus glaber]
Length = 405
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 87/168 (51%), Gaps = 11/168 (6%)
Query: 99 DGGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLT 157
+ G + L +I + +E+Y D NL +D+F + ++ + + + + +K N+L RLT
Sbjct: 3 ENGDNEKLAALEAKICHQIEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLT 62
Query: 158 HDPDDVVKALRKSK--LLEVTEDGTKVRRT-------VVVQDKPDVDECTIYVEKLPPEA 208
D + +V+AL KSK L+E++ED TK+RR+ V + K DV ++Y++ P +A
Sbjct: 63 TDFNVIVEALSKSKAELMEISEDKTKIRRSPNKPLPEVTDEYKNDVKNRSVYIKGFPTDA 122
Query: 209 EHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
D I+ G+V + + + KG F F E A K +E
Sbjct: 123 TLDDIKEWLEDKGQVLNIQMRRTLHKA-FKGSIFAVFDNIESAKKFVE 169
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 47/70 (67%), Gaps = 3/70 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--LL 57
+E+Y D NL +D+F + ++ + + + + +K N+L RLT D + +V+AL KSK L+
Sbjct: 21 IEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLTTDFNVIVEALSKSKAELM 80
Query: 58 EVTEDGTKVK 67
E++ED TK++
Sbjct: 81 EISEDKTKIR 90
>gi|193580266|ref|XP_001951533.1| PREDICTED: la protein homolog [Acyrthosiphon pisum]
Length = 438
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 86/161 (53%), Gaps = 11/161 (6%)
Query: 108 QLYQQIMNLMEFYLSDSNLRKDRFF-SQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKA 166
+L Q I+ + FY SD+NL D+F +++ + +++ V L +LA L+ DP + +A
Sbjct: 100 KLEQNIVKQLSFYFSDTNLPYDKFLQNEIKNDDGWVKIDVLLTFKRLASLSKDPAVIAQA 159
Query: 167 LRK--SKLLEVTEDGTKVRR----TVVVQDKPDVDEC---TIYVEKLPPEAEHDYIESVF 217
++ +LEV+E G K+RR V V ++ ++E +IY + P A D +
Sbjct: 160 VKNVTGSILEVSESGEKIRRKVECAVPVANQEFLNEMIARSIYCKGFPRTATMDELLEFA 219
Query: 218 SKYG-KVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALEL 257
S +G K+ P+ T + KG + F+TKEEA K L+L
Sbjct: 220 STFGDKIITKVTPRRLKTKEFKGTLYFTFNTKEEAEKFLKL 260
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 1 MEFYLSDSNLRKDRFF-SQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRK--SKLL 57
+ FY SD+NL D+F +++ + +++ V L +LA L+ DP + +A++ +L
Sbjct: 109 LSFYFSDTNLPYDKFLQNEIKNDDGWVKIDVLLTFKRLASLSKDPAVIAQAVKNVTGSIL 168
Query: 58 EVTEDGTKVKGNIIRHFLVPIS 79
EV+E G K++ + VP++
Sbjct: 169 EVSESGEKIRRKV--ECAVPVA 188
>gi|28603798|ref|NP_788838.1| lupus La protein homolog [Bos taurus]
gi|756|emb|CAA31986.1| unnamed protein product [Bos taurus]
Length = 404
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 88/168 (52%), Gaps = 11/168 (6%)
Query: 99 DGGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLT 157
+ G + L +I + +E+Y D NL +D+F + ++ + + + + +K N+L RLT
Sbjct: 3 ENGDNEKMAALEAKICHQIEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLT 62
Query: 158 HDPDDVVKALRKS--KLLEVTEDGTKVRRT-------VVVQDKPDVDECTIYVEKLPPEA 208
D + +V+AL KS +L+E++ED TK+RR+ V + K DV ++Y++ P +A
Sbjct: 63 TDFNVIVEALSKSEAELMEISEDKTKIRRSPSKPLPEVTDEYKNDVKNRSVYIKGFPTDA 122
Query: 209 EHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
D I+ G+V + + + KG F F + E A K +E
Sbjct: 123 ALDDIKEWLEDKGQVLNIQMRRTLHKA-FKGSIFAVFDSIESAKKFVE 169
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 47/70 (67%), Gaps = 3/70 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKALRKS--KLL 57
+E+Y D NL +D+F + ++ + + + + +K N+L RLT D + +V+AL KS +L+
Sbjct: 21 IEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLTTDFNVIVEALSKSEAELM 80
Query: 58 EVTEDGTKVK 67
E++ED TK++
Sbjct: 81 EISEDKTKIR 90
>gi|351700249|gb|EHB03168.1| Lupus La protein-like protein [Heterocephalus glaber]
Length = 172
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 86/168 (51%), Gaps = 11/168 (6%)
Query: 99 DGGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLT 157
+ G + L +I + +E+Y D NL +D+F + ++ E + + + +K N+L RLT
Sbjct: 3 ENGENEKLAALEAKICHQIEYYFGDFNLPQDKFLKEQIKLEEGWVPLEIMIKFNRLNRLT 62
Query: 158 HDPDDVVKALRKSK--LLEVTEDGTKVRRT-------VVVQDKPDVDECTIYVEKLPPEA 208
D + +V+ L KSK L+E++ED TK+ R+ V + K DV ++Y++ P +A
Sbjct: 63 TDFNVIVEELSKSKAELMEISEDKTKIGRSPNKPLPEVTDEYKNDVKNRSVYIKGFPADA 122
Query: 209 EHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
D I+ G+V + + + LKG F F E A K +E
Sbjct: 123 NLDDIKEWLEDKGQVLNIQMRRTLHKA-LKGSIFAVFDNIESAKKFVE 169
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 45/69 (65%), Gaps = 3/69 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--LL 57
+E+Y D NL +D+F + ++ E + + + +K N+L RLT D + +V+ L KSK L+
Sbjct: 21 IEYYFGDFNLPQDKFLKEQIKLEEGWVPLEIMIKFNRLNRLTTDFNVIVEELSKSKAELM 80
Query: 58 EVTEDGTKV 66
E++ED TK+
Sbjct: 81 EISEDKTKI 89
>gi|402587512|gb|EJW81447.1| La domain-containing protein [Wuchereria bancrofti]
Length = 382
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 86/158 (54%), Gaps = 21/158 (13%)
Query: 109 LYQQIMNLMEFYLSDSNLRKDRFFSQ-LLQESPEIEVSVFLKCNKLARLTHDPDDVVKAL 167
+ Q+I+ +E+Y D NL +DRF + + ++ ++++ LK +LA+++ DP + ++L
Sbjct: 11 IQQKIIEQVEYYFGDINLPRDRFLQEEIKKDDGWVQLTTMLKFKRLAQISSDPKIIGESL 70
Query: 168 RKSKLLEVTEDGTKVRRTVVVQDKPD-------------VDECTIYVEKLPPEAEHDYIE 214
+ SKL++V+EDG+K+RR+ P+ V T+Y++ + + D I
Sbjct: 71 KHSKLIQVSEDGSKIRRS------PEAPLPENSLEYWQVVKRRTVYIKGFGRDTKLDDIL 124
Query: 215 SVFSKYGKVTYVSLPKFKSTGK-LKGFAFVEFSTKEEA 251
+ ++G V V + + KS + KG FV + +E A
Sbjct: 125 NFVKQFGSVENVMMRREKSEKRAFKGSVFVTYKNQEIA 162
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 48/68 (70%), Gaps = 1/68 (1%)
Query: 1 MEFYLSDSNLRKDRFFSQ-LLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEV 59
+E+Y D NL +DRF + + ++ ++++ LK +LA+++ DP + ++L+ SKL++V
Sbjct: 19 VEYYFGDINLPRDRFLQEEIKKDDGWVQLTTMLKFKRLAQISSDPKIIGESLKHSKLIQV 78
Query: 60 TEDGTKVK 67
+EDG+K++
Sbjct: 79 SEDGSKIR 86
>gi|321468121|gb|EFX79108.1| hypothetical protein DAPPUDRAFT_225247 [Daphnia pulex]
Length = 452
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 97/196 (49%), Gaps = 21/196 (10%)
Query: 80 METEASDNVDKDLSDLQR-KDGGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQ- 137
M+T N +K +D K G + L +I+ +E+Y D NL +D+F +L+
Sbjct: 47 MDTSDGPNNEKAEADAANGKPTTGTNVNGDLDDKIIRQVEYYFGDYNLPRDKFLKELMGL 106
Query: 138 ESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--LLEVTEDGTKVRRTVVVQDKP--- 192
+ I ++ LK +L++LT P + AL+KS L+EV E +K+RR+ +DKP
Sbjct: 107 DDGWIPIATMLKFARLSQLTKSPAVIFAALKKSNSGLMEVNETASKIRRS---KDKPIPV 163
Query: 193 -------DVDECTIYVEKLPPEAEH-DYIESVFSKYGKVTYVSLPKFKS---TGKLKGFA 241
+V TIY + LP E D + F + V + + +K+ K KG
Sbjct: 164 ESEEYLAEVKARTIYCKGLPKEGMTIDKLLEFFKSFPIVLNIKMRYYKTKDDMSKFKGSI 223
Query: 242 FVEFSTKEEAAKALEL 257
V F+T++EAAK + L
Sbjct: 224 TVTFATRDEAAKFISL 239
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 49/86 (56%), Gaps = 7/86 (8%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--LL 57
+E+Y D NL +D+F +L+ + I ++ LK +L++LT P + AL+KS L+
Sbjct: 85 VEYYFGDYNLPRDKFLKELMGLDDGWIPIATMLKFARLSQLTKSPAVIFAALKKSNSGLM 144
Query: 58 EVTEDGTKVKGNIIRHFLVPISMETE 83
EV E +K++ R PI +E+E
Sbjct: 145 EVNETASKIR----RSKDKPIPVESE 166
>gi|302796830|ref|XP_002980176.1| hypothetical protein SELMODRAFT_35604 [Selaginella moellendorffii]
gi|300151792|gb|EFJ18436.1| hypothetical protein SELMODRAFT_35604 [Selaginella moellendorffii]
Length = 270
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 81/166 (48%), Gaps = 23/166 (13%)
Query: 112 QIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRK 169
Q++ +EFY SD+NL D + + +++ PE + + + K+ +LT + + ALR
Sbjct: 83 QVVQQVEFYFSDANLPTDNYLMKFIKKDPEGFVPIPIIGSFRKIKQLTKNYGALAAALRS 142
Query: 170 SKLLEVTEDGTKVRRTVVVQDKPDVDEC---TIYVEKLPPEAEHDYIESVFSKYGKVTYV 226
S L V+EDG KVRR + D D+DE T+ E LP + +E +F G V V
Sbjct: 143 SSKLVVSEDGKKVRRAEPLADI-DLDEIQGRTVVAENLPEDHSIQSLEKLFGTIGSVKMV 201
Query: 227 --------------SLPKFKSTGKL---KGFAFVEFSTKEEAAKAL 255
+L K T ++ K A VE+ T E+A KA+
Sbjct: 202 RVCEPGSANSVNNAALAKHSKTDRVVSNKLHALVEYETLEQAEKAV 247
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
+EFY SD+NL D + + +++ PE + + + K+ +LT + + ALR S L
Sbjct: 88 VEFYFSDANLPTDNYLMKFIKKDPEGFVPIPIIGSFRKIKQLTKNYGALAAALRSSSKLV 147
Query: 59 VTEDGTKVK 67
V+EDG KV+
Sbjct: 148 VSEDGKKVR 156
>gi|406601427|emb|CCH46950.1| hypothetical protein BN7_6556 [Wickerhamomyces ciferrii]
Length = 297
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 89/171 (52%), Gaps = 13/171 (7%)
Query: 112 QIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSV--FLKCNKLARLTHDPDDVVKALRK 169
+++ +EFY SDSNL KD+F + +Q + E VS+ N++ + VV+ALR
Sbjct: 89 EVIKQVEFYFSDSNLPKDKFLWRTVQSNTEGWVSIDKIASFNRMKKF-RPVSKVVEALRT 147
Query: 170 SKLLEVTEDGTKVRRTVVVQDKPDVD-----ECTIYVEKL---PPEAEHDYIESVFSKYG 221
S+ L+V+E+G V+R + D D + +IY + P + D +E F++YG
Sbjct: 148 SEFLDVSENGELVKRKNPILPPSDSDKQLRFQRSIYAKGFGEETPSIQED-LEKFFNQYG 206
Query: 222 KVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNPCPPDYQSSILT 272
KV V L + K K FVEF+ E+A K +EL P D + I++
Sbjct: 207 KVNEVRLRR-DDNKKFKESVFVEFADLEDAKKFVELSEKPKYNDNELLIMS 256
Score = 43.9 bits (102), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 42/69 (60%), Gaps = 3/69 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSV--FLKCNKLARLTHDPDDVVKALRKSKLLE 58
+EFY SDSNL KD+F + +Q + E VS+ N++ + VV+ALR S+ L+
Sbjct: 94 VEFYFSDSNLPKDKFLWRTVQSNTEGWVSIDKIASFNRMKKF-RPVSKVVEALRTSEFLD 152
Query: 59 VTEDGTKVK 67
V+E+G VK
Sbjct: 153 VSENGELVK 161
>gi|198457991|ref|XP_002136207.1| GA23200 [Drosophila pseudoobscura pseudoobscura]
gi|198142476|gb|EDY71218.1| GA23200 [Drosophila pseudoobscura pseudoobscura]
Length = 230
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 49/83 (59%)
Query: 117 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEVT 176
MEFY D+NL KDRF + + P + + +FL NK+ L D + KAL S+LLE+
Sbjct: 1 MEFYFGDANLTKDRFLRRYVDLDPYVPLEIFLTFNKMKPLAEDVKQIAKALNNSQLLELD 60
Query: 177 EDGTKVRRTVVVQDKPDVDECTI 199
E KVRR + D+ DV++ T+
Sbjct: 61 ESALKVRRKTKMPDQRDVNDKTL 83
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 39/67 (58%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEVT 60
MEFY D+NL KDRF + + P + + +FL NK+ L D + KAL S+LLE+
Sbjct: 1 MEFYFGDANLTKDRFLRRYVDLDPYVPLEIFLTFNKMKPLAEDVKQIAKALNNSQLLELD 60
Query: 61 EDGTKVK 67
E KV+
Sbjct: 61 ESALKVR 67
>gi|302759446|ref|XP_002963146.1| hypothetical protein SELMODRAFT_35606 [Selaginella moellendorffii]
gi|300170007|gb|EFJ36609.1| hypothetical protein SELMODRAFT_35606 [Selaginella moellendorffii]
Length = 270
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 81/166 (48%), Gaps = 23/166 (13%)
Query: 112 QIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRK 169
Q++ +EFY SD+NL D + + +++ PE + + + K+ +LT + + ALR
Sbjct: 83 QVVQQVEFYFSDANLPTDNYLMKFIKKDPEGFVPIPIIGSFRKIKQLTKNYGALAAALRS 142
Query: 170 SKLLEVTEDGTKVRRTVVVQDKPDVDEC---TIYVEKLPPEAEHDYIESVFSKYGKVTYV 226
S L V+EDG KVRR + D D+DE T+ E LP + +E +F G V V
Sbjct: 143 SSKLVVSEDGKKVRRAEPLADI-DLDEIQGRTVVAENLPEDHSIQSLEKLFGTIGSVKMV 201
Query: 227 --------------SLPKFKSTGKL---KGFAFVEFSTKEEAAKAL 255
+L K T ++ K A VE+ T E+A KA+
Sbjct: 202 RVCEPGSANSVNSAALAKHSKTDRVVSNKLHALVEYETLEQAEKAV 247
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
+EFY SD+NL D + + +++ PE + + + K+ +LT + + ALR S L
Sbjct: 88 VEFYFSDANLPTDNYLMKFIKKDPEGFVPIPIIGSFRKIKQLTKNYGALAAALRSSSKLV 147
Query: 59 VTEDGTKVK 67
V+EDG KV+
Sbjct: 148 VSEDGKKVR 156
>gi|327283153|ref|XP_003226306.1| PREDICTED: lupus La protein homolog [Anolis carolinensis]
Length = 406
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 80/154 (51%), Gaps = 13/154 (8%)
Query: 109 LYQQIMNLMEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKAL 167
L ++ +E+Y D NL +D+F + ++ + + + +K N+L RLT D D +V AL
Sbjct: 13 LEMKVCQQIEYYFGDYNLPRDKFLQEQIKLDDGWVTLETLIKFNRLNRLTKDFDVIVAAL 72
Query: 168 RKSK--LLEVTEDGTKVRRT-------VVVQDKPDVDECTIYVEKLPPEAEHDYIESVFS 218
+KSK L+EV+E+ TK+RR+ V Q K V ++Y++ P + D I+
Sbjct: 73 KKSKTGLIEVSEEKTKIRRSPNKPQPEVTEQYKNAVKNRSVYIKGFPVDTTLDDIQEWID 132
Query: 219 KYGKVTYVSLPK-FKSTGKLKGFAFVEFSTKEEA 251
KV V + K + T KG FV F T E A
Sbjct: 133 SKAKVENVQMRKTLQKT--FKGSVFVVFDTIESA 164
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 46/70 (65%), Gaps = 3/70 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--LL 57
+E+Y D NL +D+F + ++ + + + +K N+L RLT D D +V AL+KSK L+
Sbjct: 21 IEYYFGDYNLPRDKFLQEQIKLDDGWVTLETLIKFNRLNRLTKDFDVIVAALKKSKTGLI 80
Query: 58 EVTEDGTKVK 67
EV+E+ TK++
Sbjct: 81 EVSEEKTKIR 90
>gi|47825353|ref|NP_001001455.1| Sjogren syndrome antigen B (autoantigen La) [Xenopus (Silurana)
tropicalis]
gi|45219853|gb|AAH66784.1| Sjogren syndrome antigen B (autoantigen La) [Xenopus (Silurana)
tropicalis]
gi|89273913|emb|CAJ83403.1| Sjogren syndrome antigen B (autoantigen La) [Xenopus (Silurana)
tropicalis]
Length = 426
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 91/168 (54%), Gaps = 11/168 (6%)
Query: 99 DGGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFS-QLLQESPEIEVSVFLKCNKLARLT 157
+ G + +K L +I +E+Y D NL +D+F + Q+L + + + +K N+L++LT
Sbjct: 3 ENGDKEQKLDLDTKICEQVEYYFGDHNLPRDKFLNQQILLDDGWVPLETMIKFNRLSKLT 62
Query: 158 HDPDDVVKALRKSK--LLEVTEDGTKVRRTVV-----VQD--KPDVDECTIYVEKLPPEA 208
D + +++AL++SK LLE+ ED K+RR+ + D K + ++Y++ P A
Sbjct: 63 KDFNTILQALKQSKTELLEIDEDKCKIRRSPAKPLPELNDEYKNSLKNKSVYIKGFPTSA 122
Query: 209 EHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
D I+ G + + + + + KG F+ F+T++EA K LE
Sbjct: 123 NLDDIKEWLKDKGPIENIQMRRTLQK-EFKGSIFLIFNTEDEAKKFLE 169
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 47/70 (67%), Gaps = 3/70 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQ-LLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--LL 57
+E+Y D NL +D+F +Q +L + + + +K N+L++LT D + +++AL++SK LL
Sbjct: 21 VEYYFGDHNLPRDKFLNQQILLDDGWVPLETMIKFNRLSKLTKDFNTILQALKQSKTELL 80
Query: 58 EVTEDGTKVK 67
E+ ED K++
Sbjct: 81 EIDEDKCKIR 90
>gi|209881488|ref|XP_002142182.1| La domain-containing protein [Cryptosporidium muris RN66]
gi|209557788|gb|EEA07833.1| La domain-containing protein [Cryptosporidium muris RN66]
Length = 141
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 67/134 (50%), Gaps = 5/134 (3%)
Query: 106 KKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDV 163
K Q Q I +E Y SD+NLR D++ +LQ S + I +S L NK+ L + +D+
Sbjct: 4 KNQNLQNIQKQIELYFSDANLRHDKYMLNILQTSEQGNIPISKILSFNKIISLKANSNDI 63
Query: 164 VKALRKSKLLEVTEDGTKVRRTVVVQDKPDVD---ECTIYVEKLPPEAEHDYIESVFSKY 220
++AL+ SK L+V + + R V D ++++++P H I +F +
Sbjct: 64 IEALKNSKSLQVNVESQTICRKVPFDFNVDSQIPYNKILFIKRVPINWYHKTIREIFECF 123
Query: 221 GKVTYVSLPKFKST 234
G V V LPK +
Sbjct: 124 GNVAIVRLPKINKS 137
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
+E Y SD+NLR D++ +LQ S + I +S L NK+ L + +D+++AL+ SK L+
Sbjct: 15 IELYFSDANLRHDKYMLNILQTSEQGNIPISKILSFNKIISLKANSNDIIEALKNSKSLQ 74
Query: 59 VTEDGTKV 66
V + +
Sbjct: 75 VNVESQTI 82
>gi|255551040|ref|XP_002516568.1| lupus la ribonucleoprotein, putative [Ricinus communis]
gi|223544388|gb|EEF45909.1| lupus la ribonucleoprotein, putative [Ricinus communis]
Length = 494
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 90/169 (53%), Gaps = 21/169 (12%)
Query: 111 QQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN--------KLARLTHD--P 160
++++ +EFY SDSNL +D F + ES + VS+ L C+ KL + + P
Sbjct: 12 KEVLRQVEFYFSDSNLPRDNFMRNNINESEDGMVSLSLICSFKKMKGYLKLQDVKPEDVP 71
Query: 161 DDVVKA----LRKSKLLEVTEDGTKVRRTVVVQDKPD-----VDECTIYVEKLPPEAEHD 211
+ V+A LRKS L+++EDG KV R + KP+ +D TI L +A+ +
Sbjct: 72 EHTVQAVADTLRKSTSLKISEDGKKVGRIAALL-KPEEAIEQLDIRTIAASPLQYDAKME 130
Query: 212 YIESVFSKYGKVTYVSLPKFKSTGKL-KGFAFVEFSTKEEAAKALELGL 259
++S F +Y KV+ V +P+ + ++ G A +EFS +E+ L+ L
Sbjct: 131 DVQSFFGQYAKVSSVRMPRHVADKRVFCGSALIEFSNEEDTENVLKQSL 179
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 44/80 (55%), Gaps = 14/80 (17%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN--------KLARLTHD--PDDVVKA 50
+EFY SDSNL +D F + ES + VS+ L C+ KL + + P+ V+A
Sbjct: 18 VEFYFSDSNLPRDNFMRNNINESEDGMVSLSLICSFKKMKGYLKLQDVKPEDVPEHTVQA 77
Query: 51 ----LRKSKLLEVTEDGTKV 66
LRKS L+++EDG KV
Sbjct: 78 VADTLRKSTSLKISEDGKKV 97
>gi|300176544|emb|CBK24209.2| unnamed protein product [Blastocystis hominis]
Length = 342
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 69/135 (51%), Gaps = 5/135 (3%)
Query: 109 LYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKA 166
L +I +EFY S NLR+D+F + + PE + + + N+L +LT DP VV A
Sbjct: 34 LASKIRKQVEFYFSGLNLRRDKFMREKMSADPEGFMTIETLMTFNRLKQLTTDPKVVVDA 93
Query: 167 LRKSKLLEVTEDGTKVRRTVVVQDKP--DVDECTIYVEKLPPEAEHDYIESVFSKYGKVT 224
++ S L D TKV+ + + KP DV T+++ P A D + YG +
Sbjct: 94 IKSSDKLAFNSDFTKVKSNIDFR-KPENDVSLRTVHMRGFPTSATLDDLLEGLKPYGNIR 152
Query: 225 YVSLPKFKSTGKLKG 239
++ + +F ST + KG
Sbjct: 153 FIEMRRFVSTREFKG 167
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
+EFY S NLR+D+F + + PE + + + N+L +LT DP VV A++ S L
Sbjct: 42 VEFYFSGLNLRRDKFMREKMSADPEGFMTIETLMTFNRLKQLTTDPKVVVDAIKSSDKLA 101
Query: 59 VTEDGTKVKGNI 70
D TKVK NI
Sbjct: 102 FNSDFTKVKSNI 113
>gi|351698312|gb|EHB01231.1| Lupus La protein-like protein [Heterocephalus glaber]
Length = 336
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 85/168 (50%), Gaps = 11/168 (6%)
Query: 99 DGGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLT 157
+ G + L +I + +E+Y D NL D+F + ++ + + + + +K N+L RLT
Sbjct: 3 ENGDNEKLAALEAKICHQIEYYFGDFNLPWDKFLKEQIKLDEGWVPLEIMIKFNRLNRLT 62
Query: 158 HDPDDVVKALRKSK--LLEVTEDGTKVRRT-------VVVQDKPDVDECTIYVEKLPPEA 208
D + +V+AL KSK L+E++ED TK+RR+ V + K DV ++Y++ P A
Sbjct: 63 TDFNVIVEALSKSKAELMEISEDKTKIRRSPNKPLPEVTHEYKNDVKNRSVYIKGFPKVA 122
Query: 209 EHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
D I+ G+V + + + KG F F E A K +E
Sbjct: 123 TLDDIKEWLEDKGQVLNIQMKRTLHKA-FKGSIFAVFDNIESAKKFVE 169
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 46/70 (65%), Gaps = 3/70 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--LL 57
+E+Y D NL D+F + ++ + + + + +K N+L RLT D + +V+AL KSK L+
Sbjct: 21 IEYYFGDFNLPWDKFLKEQIKLDEGWVPLEIMIKFNRLNRLTTDFNVIVEALSKSKAELM 80
Query: 58 EVTEDGTKVK 67
E++ED TK++
Sbjct: 81 EISEDKTKIR 90
>gi|395519705|ref|XP_003763983.1| PREDICTED: lupus La protein homolog [Sarcophilus harrisii]
Length = 406
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 85/168 (50%), Gaps = 11/168 (6%)
Query: 99 DGGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLT 157
+ G + L +I +E+Y D NL +D+F + ++ + + + +K N+L++LT
Sbjct: 3 ENGDSEKMSDLESKICQQIEYYFGDFNLPRDKFLKEQIKIDDGWVPLETMIKFNRLSKLT 62
Query: 158 HDPDDVVKALRKSK--LLEVTEDGTKVRRT-------VVVQDKPDVDECTIYVEKLPPEA 208
D D + AL KSK L+EV+ED TK+RR+ V + K +V +IYV+ P +A
Sbjct: 63 KDFDVIRSALMKSKAELMEVSEDKTKIRRSPSKPLPEVTDEYKNEVKNRSIYVKGFPTDA 122
Query: 209 EHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
D I+ G+V + + + KG F F + E A K +E
Sbjct: 123 TLDDIKEWLEGKGQVQNIQMRRTLHKA-FKGSIFAVFDSVESAKKFIE 169
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 45/70 (64%), Gaps = 3/70 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--LL 57
+E+Y D NL +D+F + ++ + + + +K N+L++LT D D + AL KSK L+
Sbjct: 21 IEYYFGDFNLPRDKFLKEQIKIDDGWVPLETMIKFNRLSKLTKDFDVIRSALMKSKAELM 80
Query: 58 EVTEDGTKVK 67
EV+ED TK++
Sbjct: 81 EVSEDKTKIR 90
>gi|242064238|ref|XP_002453408.1| hypothetical protein SORBIDRAFT_04g005500 [Sorghum bicolor]
gi|241933239|gb|EES06384.1| hypothetical protein SORBIDRAFT_04g005500 [Sorghum bicolor]
Length = 451
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 96/206 (46%), Gaps = 21/206 (10%)
Query: 66 VKGNIIRHFLVPISMETEASDNVDKDLSDLQRKDGGGRHRKKQLYQQIMNLMEFYLSDSN 125
VKG ++ +P+ A+D ++ S++ GG +L +I+ +E+Y SD N
Sbjct: 96 VKGEVVEEDALPV-----ATDIINDASSEVPEAGSGGVVLTDELRDRIVKQVEYYFSDEN 150
Query: 126 LRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEVTEDGTKVR 183
L D F + ++++ + + + ++ +L D + ALR S L V+ DG +VR
Sbjct: 151 LPTDEFMLKYVKKNKKGFVPIETIASFRRMKKLVQDLSVIEAALRTSPKLVVSSDGKRVR 210
Query: 184 R--TVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVS-----LPKFKSTGK 236
R + + D + T+ VE LPP+ + I+ FS GKV V+ L K ST K
Sbjct: 211 RLHPLPHNELKDSKKSTVLVENLPPDFSMESIQEKFSTVGKVVKVTINDPELVKESSTAK 270
Query: 237 LKGF-------AFVEFSTKEEAAKAL 255
F VE+ E A KA+
Sbjct: 271 KPDFNLSSKVHVLVEYEAVEAAEKAV 296
>gi|195052589|ref|XP_001993329.1| GH13748 [Drosophila grimshawi]
gi|193900388|gb|EDV99254.1| GH13748 [Drosophila grimshawi]
Length = 392
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 82/158 (51%), Gaps = 15/158 (9%)
Query: 113 IMNLMEFYLSDSNLRKDRFFSQLL--QESPEIEVSVFLKCNKLARLTHDPDDVVKALRKS 170
I+ +E+Y D+NL +D+F S+ + E + +SV + +LA LT D D++V AL KS
Sbjct: 56 IIRQVEYYFGDANLHRDKFLSEQITKNEGGWVPLSVLVTFKRLAALTTDFDEIVNALNKS 115
Query: 171 --KLLEVTEDGTKVRRTVVV-------QDKPDVDECTIYVEKLPPEAEHDYIESVFSKYG 221
L+E++ED +RR + + ++ E T Y + P +++ I S Y
Sbjct: 116 GEGLVEISEDKQSLRRHTERPIPEHNEERRKEIQERTAYAKGFPLDSQMTEILDFVSAYE 175
Query: 222 KVTYVSLPKF----KSTGKLKGFAFVEFSTKEEAAKAL 255
KV V++ K + K KG FV F KE+A++ L
Sbjct: 176 KVVNVTMRKHYDKPTKSYKFKGSIFVTFEKKEQASEFL 213
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 1 MEFYLSDSNLRKDRFFSQLL--QESPEIEVSVFLKCNKLARLTHDPDDVVKALRKS--KL 56
+E+Y D+NL +D+F S+ + E + +SV + +LA LT D D++V AL KS L
Sbjct: 60 VEYYFGDANLHRDKFLSEQITKNEGGWVPLSVLVTFKRLAALTTDFDEIVNALNKSGEGL 119
Query: 57 LEVTEDGTKVKGNIIRHFLVPISMETE 83
+E++ED K ++ RH PI E
Sbjct: 120 VEISED----KQSLRRHTERPIPEHNE 142
>gi|281204933|gb|EFA79127.1| Lupus La protein [Polysphondylium pallidum PN500]
Length = 364
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 73/144 (50%), Gaps = 3/144 (2%)
Query: 109 LYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKA 166
L ++ +E+Y SDSN D+F + ++PE + + V NK+ +T D + A
Sbjct: 15 LLNKVAKQIEYYFSDSNYPTDKFLKEAAAKNPEGYVGIEVLATFNKIKSMTTDLQLISDA 74
Query: 167 LRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPE-AEHDYIESVFSKYGKVTY 225
L+ S L+++EDG V+R + D ++ + T+Y + P + + I+ F YGKV
Sbjct: 75 LKDSDSLQLSEDGKMVKRLNPLPDNEELAKKTLYSKGWPKDTTTMETIQDFFGSYGKVLS 134
Query: 226 VSLPKFKSTGKLKGFAFVEFSTKE 249
V + K KG A V+ ++E
Sbjct: 135 VRMRKNNKDKSFKGSALVDLESEE 158
Score = 45.1 bits (105), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
+E+Y SDSN D+F + ++PE + + V NK+ +T D + AL+ S L+
Sbjct: 23 IEYYFSDSNYPTDKFLKEAAAKNPEGYVGIEVLATFNKIKSMTTDLQLISDALKDSDSLQ 82
Query: 59 VTEDGTKVK 67
++EDG VK
Sbjct: 83 LSEDGKMVK 91
>gi|444727390|gb|ELW67888.1| Lupus La protein [Tupaia chinensis]
Length = 387
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 87/168 (51%), Gaps = 11/168 (6%)
Query: 99 DGGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLT 157
+ G + L +I + +E+Y D NL +D+F + ++ + + + + +K N+L LT
Sbjct: 15 ENGDNEKMAALEAKICHQIEYYFGDFNLPQDKFLKEQIKLDEGWVPLEIMIKFNRLNCLT 74
Query: 158 HDPDDVVKALRKSK--LLEVTEDGTKVRRT-------VVVQDKPDVDECTIYVEKLPPEA 208
D + +V+AL +SK L+E++ED TK+RR+ V + K DV +IY++ P +A
Sbjct: 75 TDFNAIVEALSESKAELMEISEDKTKIRRSPSKSLPEVTDEYKNDVKNRSIYIKGFPTDA 134
Query: 209 EHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
+D I+ G++ + + + LKG F F A K +E
Sbjct: 135 TYDDIKEWLEGKGEILNIQMRRTLQKA-LKGSIFAVFENIASAKKFVE 181
Score = 44.7 bits (104), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 46/70 (65%), Gaps = 3/70 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--LL 57
+E+Y D NL +D+F + ++ + + + + +K N+L LT D + +V+AL +SK L+
Sbjct: 33 IEYYFGDFNLPQDKFLKEQIKLDEGWVPLEIMIKFNRLNCLTTDFNAIVEALSESKAELM 92
Query: 58 EVTEDGTKVK 67
E++ED TK++
Sbjct: 93 EISEDKTKIR 102
>gi|395328994|gb|EJF61383.1| hypothetical protein DICSQDRAFT_60653 [Dichomitus squalens LYAD-421
SS1]
Length = 459
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 80/171 (46%), Gaps = 14/171 (8%)
Query: 117 MEFYLSDSNLRKDRFFSQLLQESPEIEVSV-----FLKCNKLARLTHDPDDVVKALRKSK 171
+EFY +DSNL D+F L +PE V V F + + L +D VV AL+KS+
Sbjct: 18 VEFYFADSNLPFDKFMWTLHTANPEHWVPVKTVASFKRMREFQSLGNDW--VVDALKKSE 75
Query: 172 LLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAE--HDYIESVFSKYGKVTYVSLP 229
LEV E G VRR VQ E ++Y + E +E F+KYGK V +
Sbjct: 76 ELEVDEAGENVRRRTEVQPPKGQFERSVYAKGFGKEEPGLQKKLEDFFNKYGKTNAVRMR 135
Query: 230 KFKSTGKLKGFAFVEFSTKEEAAKALELGLNPCP-PDYQSSILTTTSRLSF 279
+ T + KG F EF+ K++ LN P P + L S+ ++
Sbjct: 136 RIDGTKEFKGSVFAEFAD----FKSVSAFLNADPKPTWNGEELLIMSKEAY 182
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 39/72 (54%), Gaps = 7/72 (9%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSV-----FLKCNKLARLTHDPDDVVKALRKSK 55
+EFY +DSNL D+F L +PE V V F + + L +D VV AL+KS+
Sbjct: 18 VEFYFADSNLPFDKFMWTLHTANPEHWVPVKTVASFKRMREFQSLGNDW--VVDALKKSE 75
Query: 56 LLEVTEDGTKVK 67
LEV E G V+
Sbjct: 76 ELEVDEAGENVR 87
>gi|294461353|gb|ADE76238.1| unknown [Picea sitchensis]
Length = 465
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 84/169 (49%), Gaps = 21/169 (12%)
Query: 107 KQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN--KLARLTHDPDDVV 164
++L Q+++ +EFY SD+NL D++ + +++ PE V + N K+ L + V
Sbjct: 145 EELRQKVVKQVEFYFSDANLPTDKYLMKFVKKDPEGFVPIPFLANFRKVKNLVSNHSLVA 204
Query: 165 KALRKSKLLEVTEDGTKVRRTVVVQDKPDVDEC---TIYVEKLPPEAEHDYIESVFSKYG 221
ALR S L V+EDG KVRR + D D++E T+ E LP + +E F G
Sbjct: 205 AALRTSSQLVVSEDGKKVRRLHPLADT-DIEEVQSRTVVAENLPNDYSIQNLEKRFGAVG 263
Query: 222 KVTYVSL--PKFKSTGKL-------------KGFAFVEFSTKEEAAKAL 255
V V + P+ +G++ K A VE+ T E+A KA+
Sbjct: 264 NVKLVRVFQPQRYDSGQVSMKAHRNDMFVSSKLHALVEYETVEQAEKAV 312
Score = 44.3 bits (103), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN--KLARLTHDPDDVVKALRKSKLLE 58
+EFY SD+NL D++ + +++ PE V + N K+ L + V ALR S L
Sbjct: 155 VEFYFSDANLPTDKYLMKFVKKDPEGFVPIPFLANFRKVKNLVSNHSLVAAALRTSSQLV 214
Query: 59 VTEDGTKVK 67
V+EDG KV+
Sbjct: 215 VSEDGKKVR 223
>gi|444721549|gb|ELW62280.1| Lupus La protein [Tupaia chinensis]
Length = 397
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 86/168 (51%), Gaps = 11/168 (6%)
Query: 99 DGGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLT 157
+ G + L +I + +E+Y D NL +D+F + ++ + + + + +K N+L RLT
Sbjct: 3 ENGDNEKMAALEAKICHQIEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLT 62
Query: 158 HDPDDVVKALRKSK--LLEVTEDGTKVRRT-------VVVQDKPDVDECTIYVEKLPPEA 208
D + +V+AL KSK L+E++ED TK+RR+ V + K DV ++Y++ P +A
Sbjct: 63 TDFNVIVEALSKSKAELMEISEDKTKIRRSPSKPLPEVTDEYKNDVKNRSVYIKGFPTDA 122
Query: 209 EHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
D I+ G++ + + + KG F F A K +E
Sbjct: 123 TLDDIKEWLEGKGEILNIQMRRTLQKA-FKGSIFAVFENIASAKKFVE 169
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 47/70 (67%), Gaps = 3/70 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--LL 57
+E+Y D NL +D+F + ++ + + + + +K N+L RLT D + +V+AL KSK L+
Sbjct: 21 IEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLTTDFNVIVEALSKSKAELM 80
Query: 58 EVTEDGTKVK 67
E++ED TK++
Sbjct: 81 EISEDKTKIR 90
>gi|393909675|gb|EJD75548.1| La domain-containing protein, variant [Loa loa]
Length = 284
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 84/152 (55%), Gaps = 9/152 (5%)
Query: 109 LYQQIMNLMEFYLSDSNLRKDRFFSQ-LLQESPEIEVSVFLKCNKLARLTHDPDDVVKAL 167
+ Q+I+ +E+Y D NL +DRF + + ++ ++++ LK +LA+++ +P + ++L
Sbjct: 66 IQQKIIEQIEYYFGDINLPRDRFLQEEIKKDDGWVQLTTMLKFKRLAQISSNPKIIRESL 125
Query: 168 RKSKLLEVTEDGTKVRRTVVVQDKPD-------VDECTIYVEKLPPEAEHDYIESVFSKY 220
+ S+L++V+EDG+K+RR + + V T+Y++ E + D I ++
Sbjct: 126 KHSELMQVSEDGSKIRRNPAIPLPENSLEYWQVVKRRTVYIKGFERETKLDDILDFVKQF 185
Query: 221 GKVTYVSLPKFKSTGK-LKGFAFVEFSTKEEA 251
G V V + + KS + KG FV + ++ A
Sbjct: 186 GSVENVMMRREKSEKRAFKGSVFVTYKDQKTA 217
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 49/70 (70%), Gaps = 1/70 (1%)
Query: 1 MEFYLSDSNLRKDRFFSQ-LLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEV 59
+E+Y D NL +DRF + + ++ ++++ LK +LA+++ +P + ++L+ S+L++V
Sbjct: 74 IEYYFGDINLPRDRFLQEEIKKDDGWVQLTTMLKFKRLAQISSNPKIIRESLKHSELMQV 133
Query: 60 TEDGTKVKGN 69
+EDG+K++ N
Sbjct: 134 SEDGSKIRRN 143
>gi|326431778|gb|EGD77348.1| hypothetical protein PTSG_08444 [Salpingoeca sp. ATCC 50818]
Length = 303
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 86/157 (54%), Gaps = 9/157 (5%)
Query: 112 QIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRK 169
+I+ +E+Y SD N +D+F + ++S E I +S L NKL +T D D+VV AL++
Sbjct: 7 KIIKQVEYYFSDRNYPRDKFMQETAKKSDEQWIPLSTLLTFNKLKTITEDQDEVVAALKE 66
Query: 170 ---SKLLEVTEDGTKVRRTVV--VQDKPDVDECTIYVEKLPPEAEH-DYIESVFSKYG-K 222
S ++ E G +RR + + ++D+ TIYV+ P+ + D + S F + G +
Sbjct: 67 APNSVHFQLNESGDAIRRNPAKPIATQEELDQRTIYVKGFDPKTINVDTVASFFKEKGFE 126
Query: 223 VTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGL 259
+V + K T K K AFV+F+T E A + ++ L
Sbjct: 127 PEHVQIRKQFKTKKNKPSAFVQFATPEVAKQVVDTPL 163
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 121/290 (41%), Gaps = 67/290 (23%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRK---SK 55
+E+Y SD N +D+F + ++S E I +S L NKL +T D D+VV AL++ S
Sbjct: 12 VEYYFSDRNYPRDKFMQETAKKSDEQWIPLSTLLTFNKLKTITEDQDEVVAALKEAPNSV 71
Query: 56 LLEVTEDGTKVKGNIIRHFLVPISMETEASD-------------NVDKDLSDLQRKDGGG 102
++ E G ++ N + PI+ + E NVD S + K
Sbjct: 72 HFQLNESGDAIRRNPAK----PIATQEELDQRTIYVKGFDPKTINVDTVASFFKEKGFEP 127
Query: 103 RHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDD 162
H + + + + + N K F Q +PE+ V LT D D
Sbjct: 128 EH---------VQIRKQFKTKKN--KPSAFVQFA--TPEVAKQVV-----DTPLTLDDKD 169
Query: 163 V-----------VKALR-----KSKLLEVTEDGTKVRRTV-VVQDKPDVDECTIYVEKLP 205
V A+R K K + +K+R TV V DK +C +++ +P
Sbjct: 170 VEMHMKVDYLEMKSAMRNEYRQKKKQDQEEAQKSKMRETVTAVMDK----DCVVHLAGVP 225
Query: 206 PEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKAL 255
+ + ++ VF ++G+V +V + ++ G +V + T AA A+
Sbjct: 226 DDTSREDLKDVFEEFGEVAWVDFARGETQG------YVRYKTSGSAAAAV 269
>gi|393909676|gb|EFO19002.2| La domain-containing protein [Loa loa]
Length = 391
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 84/152 (55%), Gaps = 9/152 (5%)
Query: 109 LYQQIMNLMEFYLSDSNLRKDRFFSQ-LLQESPEIEVSVFLKCNKLARLTHDPDDVVKAL 167
+ Q+I+ +E+Y D NL +DRF + + ++ ++++ LK +LA+++ +P + ++L
Sbjct: 16 IQQKIIEQIEYYFGDINLPRDRFLQEEIKKDDGWVQLTTMLKFKRLAQISSNPKIIRESL 75
Query: 168 RKSKLLEVTEDGTKVRRTVVVQDKPD-------VDECTIYVEKLPPEAEHDYIESVFSKY 220
+ S+L++V+EDG+K+RR + + V T+Y++ E + D I ++
Sbjct: 76 KHSELMQVSEDGSKIRRNPAIPLPENSLEYWQVVKRRTVYIKGFERETKLDDILDFVKQF 135
Query: 221 GKVTYVSLPKFKSTGK-LKGFAFVEFSTKEEA 251
G V V + + KS + KG FV + ++ A
Sbjct: 136 GSVENVMMRREKSEKRAFKGSVFVTYKDQKTA 167
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 49/70 (70%), Gaps = 1/70 (1%)
Query: 1 MEFYLSDSNLRKDRFFSQ-LLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEV 59
+E+Y D NL +DRF + + ++ ++++ LK +LA+++ +P + ++L+ S+L++V
Sbjct: 24 IEYYFGDINLPRDRFLQEEIKKDDGWVQLTTMLKFKRLAQISSNPKIIRESLKHSELMQV 83
Query: 60 TEDGTKVKGN 69
+EDG+K++ N
Sbjct: 84 SEDGSKIRRN 93
>gi|312086415|ref|XP_003145067.1| La domain-containing protein [Loa loa]
Length = 450
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 84/152 (55%), Gaps = 9/152 (5%)
Query: 109 LYQQIMNLMEFYLSDSNLRKDRFFSQ-LLQESPEIEVSVFLKCNKLARLTHDPDDVVKAL 167
+ Q+I+ +E+Y D NL +DRF + + ++ ++++ LK +LA+++ +P + ++L
Sbjct: 66 IQQKIIEQIEYYFGDINLPRDRFLQEEIKKDDGWVQLTTMLKFKRLAQISSNPKIIRESL 125
Query: 168 RKSKLLEVTEDGTKVRRTVVVQDKPD-------VDECTIYVEKLPPEAEHDYIESVFSKY 220
+ S+L++V+EDG+K+RR + + V T+Y++ E + D I ++
Sbjct: 126 KHSELMQVSEDGSKIRRNPAIPLPENSLEYWQVVKRRTVYIKGFERETKLDDILDFVKQF 185
Query: 221 GKVTYVSLPKFKSTGK-LKGFAFVEFSTKEEA 251
G V V + + KS + KG FV + ++ A
Sbjct: 186 GSVENVMMRREKSEKRAFKGSVFVTYKDQKTA 217
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 49/70 (70%), Gaps = 1/70 (1%)
Query: 1 MEFYLSDSNLRKDRFFSQ-LLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEV 59
+E+Y D NL +DRF + + ++ ++++ LK +LA+++ +P + ++L+ S+L++V
Sbjct: 74 IEYYFGDINLPRDRFLQEEIKKDDGWVQLTTMLKFKRLAQISSNPKIIRESLKHSELMQV 133
Query: 60 TEDGTKVKGN 69
+EDG+K++ N
Sbjct: 134 SEDGSKIRRN 143
>gi|170581909|ref|XP_001895893.1| La domain containing protein [Brugia malayi]
gi|158597029|gb|EDP35268.1| La domain containing protein [Brugia malayi]
Length = 445
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 85/158 (53%), Gaps = 21/158 (13%)
Query: 109 LYQQIMNLMEFYLSDSNLRKDRFFSQ-LLQESPEIEVSVFLKCNKLARLTHDPDDVVKAL 167
+ Q+I+ +E+Y D NL +DRF + + ++ ++++ LK +LA+++ DP + ++L
Sbjct: 62 VQQKIIEQVEYYFGDINLPRDRFLQEEIKKDDGWVQLTTMLKFKRLAQISSDPKIIGESL 121
Query: 168 RKSKLLEVTEDGTKVRRTVVVQDKPD-------------VDECTIYVEKLPPEAEHDYIE 214
+ SKL++V+EDG+K+RR P+ V T+Y++ + + D I
Sbjct: 122 KLSKLIQVSEDGSKIRRN------PEAPLPENSLEYWQVVKRRTVYIKGFGRDTKLDDIL 175
Query: 215 SVFSKYGKVTYVSLPKFKSTGK-LKGFAFVEFSTKEEA 251
+ ++G V V + + KS + KG FV + +E A
Sbjct: 176 NFVKQFGSVENVMMRREKSEKRAFKGSVFVTYKNQEIA 213
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 49/70 (70%), Gaps = 1/70 (1%)
Query: 1 MEFYLSDSNLRKDRFFSQ-LLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEV 59
+E+Y D NL +DRF + + ++ ++++ LK +LA+++ DP + ++L+ SKL++V
Sbjct: 70 VEYYFGDINLPRDRFLQEEIKKDDGWVQLTTMLKFKRLAQISSDPKIIGESLKLSKLIQV 129
Query: 60 TEDGTKVKGN 69
+EDG+K++ N
Sbjct: 130 SEDGSKIRRN 139
>gi|195386902|ref|XP_002052143.1| GJ17394 [Drosophila virilis]
gi|194148600|gb|EDW64298.1| GJ17394 [Drosophila virilis]
Length = 392
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 80/154 (51%), Gaps = 15/154 (9%)
Query: 113 IMNLMEFYLSDSNLRKDRFFSQLL--QESPEIEVSVFLKCNKLARLTHDPDDVVKALRKS 170
I+ +E+Y D+NL +D+F S+ + E + +SV + +LA LT D D++V AL KS
Sbjct: 56 IIRQVEYYFGDANLHRDKFLSEQISKNEGGWVPLSVLVTFKRLASLTTDFDEIVNALNKS 115
Query: 171 K--LLEVTEDGTKVRR-------TVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYG 221
L+E++ED +RR + + ++ E T+Y + P +++ I S Y
Sbjct: 116 DEGLVEISEDKQSLRRHPERPVPEHNEERRKEIQERTVYAKGFPLDSQMTEILDFVSAYE 175
Query: 222 KVTYVSLPKF----KSTGKLKGFAFVEFSTKEEA 251
KV V++ K + K KG FV F KE+A
Sbjct: 176 KVVNVTMRKHYDKPTKSYKFKGSIFVTFEKKEQA 209
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 1 MEFYLSDSNLRKDRFFSQLL--QESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--L 56
+E+Y D+NL +D+F S+ + E + +SV + +LA LT D D++V AL KS L
Sbjct: 60 VEYYFGDANLHRDKFLSEQISKNEGGWVPLSVLVTFKRLASLTTDFDEIVNALNKSDEGL 119
Query: 57 LEVTEDGTKVKGNIIRHFLVPISMETE 83
+E++ED K ++ RH P+ E
Sbjct: 120 VEISED----KQSLRRHPERPVPEHNE 142
>gi|348519707|ref|XP_003447371.1| PREDICTED: lupus La protein homolog [Oreochromis niloticus]
Length = 400
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 82/158 (51%), Gaps = 11/158 (6%)
Query: 109 LYQQIMNLMEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKAL 167
L ++ +E+Y D NL +DRF + LQ + + + LK N+L LT D ++ AL
Sbjct: 11 LEAKVARQIEYYFGDHNLPRDRFLKEQLQVDDGWVTLETMLKFNRLKSLTTDSSVLIAAL 70
Query: 168 RKSK--LLEVTEDGTKVRRT----VVVQD---KPDVDECTIYVEKLPPEAEHDYIESVFS 218
KSK LLE++ED TK+RR+ + Q+ K + ++Y++ P E D I+ +
Sbjct: 71 EKSKTGLLEISEDKTKIRRSPSKPLPEQNDEYKDALKHKSVYMKGFPLETSLDEIQDWLN 130
Query: 219 KYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
G V + + + + KG F+ F T+E A + LE
Sbjct: 131 GKGSVENIQMRR-NLQRQFKGSVFICFDTEESAKQFLE 167
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--LL 57
+E+Y D NL +DRF + LQ + + + LK N+L LT D ++ AL KSK LL
Sbjct: 19 IEYYFGDHNLPRDRFLKEQLQVDDGWVTLETMLKFNRLKSLTTDSSVLIAALEKSKTGLL 78
Query: 58 EVTEDGTKVK 67
E++ED TK++
Sbjct: 79 EISEDKTKIR 88
>gi|109472495|ref|XP_001058361.1| PREDICTED: lupus La protein homolog [Rattus norvegicus]
gi|293347005|ref|XP_002726506.1| PREDICTED: lupus La protein homolog [Rattus norvegicus]
Length = 402
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 83/155 (53%), Gaps = 11/155 (7%)
Query: 109 LYQQIMNLMEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKAL 167
L +I + +E+Y D NL +D+F + ++ + + + +K N+L RLT D + +V+AL
Sbjct: 13 LEAKICHQIEYYFGDFNLPQDKFLKEQIKLDEGWVSLETMIKFNRLNRLTTDFNVIVQAL 72
Query: 168 RKS--KLLEVTEDGTKVRRT-------VVVQDKPDVDECTIYVEKLPPEAEHDYIESVFS 218
KS KL+EV+ D TK+RR+ V+ + K DV ++Y++ P +A D I+
Sbjct: 73 SKSKAKLMEVSADKTKIRRSPSRPLPEVMDEYKNDVKNRSVYIKGFPTDATLDDIKEWLD 132
Query: 219 KYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAK 253
G++ + + + K KG F F + + A K
Sbjct: 133 DKGQILNIQMRR-KLHKTFKGSIFAVFDSIQSAKK 166
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 45/70 (64%), Gaps = 3/70 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKALRKS--KLL 57
+E+Y D NL +D+F + ++ + + + +K N+L RLT D + +V+AL KS KL+
Sbjct: 21 IEYYFGDFNLPQDKFLKEQIKLDEGWVSLETMIKFNRLNRLTTDFNVIVQALSKSKAKLM 80
Query: 58 EVTEDGTKVK 67
EV+ D TK++
Sbjct: 81 EVSADKTKIR 90
>gi|74223023|dbj|BAE40655.1| unnamed protein product [Mus musculus]
Length = 415
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 84/159 (52%), Gaps = 11/159 (6%)
Query: 109 LYQQIMNLMEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKAL 167
L +I + +E+Y D NL +D+F + ++ + + + +K N+L RLT D + +V+AL
Sbjct: 13 LEAKICHQIEYYFGDFNLPRDKFLKEQIKLDEGWVPLETMIKFNRLNRLTTDFNVIVQAL 72
Query: 168 RKS--KLLEVTEDGTKVRRT-------VVVQDKPDVDECTIYVEKLPPEAEHDYIESVFS 218
KS KL+EV+ D TK+RR+ V + K DV ++Y++ P +A D I+
Sbjct: 73 SKSKAKLMEVSADKTKIRRSPSRPLPEVTDEYKNDVKNRSVYIKGFPADATLDDIKEWLD 132
Query: 219 KYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALEL 257
G++ + + + KG F F + + A K +E+
Sbjct: 133 DKGQILNIQMRRTLHK-TFKGSIFAVFDSIQSAKKFVEI 170
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 45/70 (64%), Gaps = 3/70 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKALRKS--KLL 57
+E+Y D NL +D+F + ++ + + + +K N+L RLT D + +V+AL KS KL+
Sbjct: 21 IEYYFGDFNLPRDKFLKEQIKLDEGWVPLETMIKFNRLNRLTTDFNVIVQALSKSKAKLM 80
Query: 58 EVTEDGTKVK 67
EV+ D TK++
Sbjct: 81 EVSADKTKIR 90
>gi|387016788|gb|AFJ50513.1| Lupus La protein-like protein [Crotalus adamanteus]
Length = 408
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 83/164 (50%), Gaps = 13/164 (7%)
Query: 99 DGGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLT 157
+ G L +++ +E+Y D NL +D+F + L+ + + + +K N+L RLT
Sbjct: 3 ENGDSENMSDLEKKVCQQIEYYFGDHNLPRDKFLQEKLKTDDGWVTLETIIKFNRLNRLT 62
Query: 158 HDPDDVVKALRKSK--LLEVTEDGTKVRRT-------VVVQDKPDVDECTIYVEKLPPEA 208
D D +V AL+KSK L+EV+ED TK+RR+ V Q K + ++Y++ P +
Sbjct: 63 KDFDVIVGALKKSKTELMEVSEDRTKIRRSPNKPLPEVTEQYKNAIKSRSVYIKGFPLDT 122
Query: 209 EHDYIESVFSKYGKVTYVSLPK-FKSTGKLKGFAFVEFSTKEEA 251
D I+ GKV + + + + T KG F F + E A
Sbjct: 123 TLDDIKEWLDCKGKVENIQMRRTLQKT--FKGSIFAVFDSVESA 164
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 46/70 (65%), Gaps = 3/70 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--LL 57
+E+Y D NL +D+F + L+ + + + +K N+L RLT D D +V AL+KSK L+
Sbjct: 21 IEYYFGDHNLPRDKFLQEKLKTDDGWVTLETIIKFNRLNRLTKDFDVIVGALKKSKTELM 80
Query: 58 EVTEDGTKVK 67
EV+ED TK++
Sbjct: 81 EVSEDRTKIR 90
>gi|148695104|gb|EDL27051.1| Sjogren syndrome antigen B, isoform CRA_b [Mus musculus]
Length = 422
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 84/159 (52%), Gaps = 11/159 (6%)
Query: 109 LYQQIMNLMEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKAL 167
L +I + +E+Y D NL +D+F + ++ + + + +K N+L RLT D + +V+AL
Sbjct: 20 LEAKICHQIEYYFGDFNLPRDKFLKEQIKLDEGWVPLETMIKFNRLNRLTTDFNVIVQAL 79
Query: 168 RKS--KLLEVTEDGTKVRRT-------VVVQDKPDVDECTIYVEKLPPEAEHDYIESVFS 218
KS KL+EV+ D TK+RR+ V + K DV ++Y++ P +A D I+
Sbjct: 80 SKSKAKLMEVSADKTKIRRSPSRPLPEVTDEYKNDVKNRSVYIKGFPTDATLDDIKEWLD 139
Query: 219 KYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALEL 257
G++ + + + KG F F + + A K +E+
Sbjct: 140 DKGQILNIQMRRTLHK-TFKGSIFAVFDSIQSAKKFVEI 177
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 45/70 (64%), Gaps = 3/70 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKALRKS--KLL 57
+E+Y D NL +D+F + ++ + + + +K N+L RLT D + +V+AL KS KL+
Sbjct: 28 IEYYFGDFNLPRDKFLKEQIKLDEGWVPLETMIKFNRLNRLTTDFNVIVQALSKSKAKLM 87
Query: 58 EVTEDGTKVK 67
EV+ D TK++
Sbjct: 88 EVSADKTKIR 97
>gi|6678143|ref|NP_033304.1| lupus La protein homolog [Mus musculus]
gi|158636012|ref|NP_001103615.1| lupus La protein homolog [Mus musculus]
gi|417240|sp|P32067.1|LA_MOUSE RecName: Full=Lupus La protein homolog; AltName: Full=La
autoantigen homolog; AltName: Full=La ribonucleoprotein
gi|198713|gb|AAA39415.1| autoantigen [Mus musculus]
gi|13277894|gb|AAH03820.1| Ssb protein [Mus musculus]
gi|26328707|dbj|BAC28092.1| unnamed protein product [Mus musculus]
gi|26353696|dbj|BAC40478.1| unnamed protein product [Mus musculus]
gi|74194396|dbj|BAE24699.1| unnamed protein product [Mus musculus]
gi|76779880|gb|AAI06151.1| Ssb protein [Mus musculus]
gi|148695102|gb|EDL27049.1| Sjogren syndrome antigen B, isoform CRA_a [Mus musculus]
gi|148695103|gb|EDL27050.1| Sjogren syndrome antigen B, isoform CRA_a [Mus musculus]
Length = 415
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 84/159 (52%), Gaps = 11/159 (6%)
Query: 109 LYQQIMNLMEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKAL 167
L +I + +E+Y D NL +D+F + ++ + + + +K N+L RLT D + +V+AL
Sbjct: 13 LEAKICHQIEYYFGDFNLPRDKFLKEQIKLDEGWVPLETMIKFNRLNRLTTDFNVIVQAL 72
Query: 168 RKS--KLLEVTEDGTKVRRT-------VVVQDKPDVDECTIYVEKLPPEAEHDYIESVFS 218
KS KL+EV+ D TK+RR+ V + K DV ++Y++ P +A D I+
Sbjct: 73 SKSKAKLMEVSADKTKIRRSPSRPLPEVTDEYKNDVKNRSVYIKGFPTDATLDDIKEWLD 132
Query: 219 KYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALEL 257
G++ + + + KG F F + + A K +E+
Sbjct: 133 DKGQILNIQMRRTLHK-TFKGSIFAVFDSIQSAKKFVEI 170
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 45/70 (64%), Gaps = 3/70 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKALRKS--KLL 57
+E+Y D NL +D+F + ++ + + + +K N+L RLT D + +V+AL KS KL+
Sbjct: 21 IEYYFGDFNLPRDKFLKEQIKLDEGWVPLETMIKFNRLNRLTTDFNVIVQALSKSKAKLM 80
Query: 58 EVTEDGTKVK 67
EV+ D TK++
Sbjct: 81 EVSADKTKIR 90
>gi|26353736|dbj|BAC40498.1| unnamed protein product [Mus musculus]
Length = 415
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 85/160 (53%), Gaps = 13/160 (8%)
Query: 109 LYQQIMNLMEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKAL 167
L +I + +E+Y D NL +D+F + ++ + + + +K N+L RLT D + +V+AL
Sbjct: 13 LEAKICHQIEYYFGDFNLPRDKFLKEQIKLDEGWVPLETMIKFNRLNRLTTDFNVIVQAL 72
Query: 168 RKS--KLLEVTEDGTKVRRT-------VVVQDKPDVDECTIYVEKLPPEAEHDYIESVFS 218
KS KL+EV+ D TK+RR+ V + K DV ++Y++ P +A D I+
Sbjct: 73 SKSKAKLMEVSADKTKIRRSPSRPLPEVTDEYKNDVKNRSVYIKGFPTDATLDDIKEWLD 132
Query: 219 KYGKVTYVSLPK-FKSTGKLKGFAFVEFSTKEEAAKALEL 257
G++ + + + T KG F F + + A K +E+
Sbjct: 133 DKGQILNIQMRRTLHKT--FKGSIFAVFDSIQSAKKFVEI 170
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 45/70 (64%), Gaps = 3/70 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKALRKS--KLL 57
+E+Y D NL +D+F + ++ + + + +K N+L RLT D + +V+AL KS KL+
Sbjct: 21 IEYYFGDFNLPRDKFLKEQIKLDEGWVPLETMIKFNRLNRLTTDFNVIVQALSKSKAKLM 80
Query: 58 EVTEDGTKVK 67
EV+ D TK++
Sbjct: 81 EVSADKTKIR 90
>gi|281348183|gb|EFB23767.1| hypothetical protein PANDA_004630 [Ailuropoda melanoleuca]
Length = 368
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 79/147 (53%), Gaps = 11/147 (7%)
Query: 117 MEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--LL 173
+++Y D NL +D+F + ++ + + + + +K N+L RLT D + +V+AL KSK L+
Sbjct: 1 LQYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLTTDFNIIVEALSKSKAELM 60
Query: 174 EVTEDGTKVRRT-------VVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYV 226
E++ED TK+RR+ V + K DV ++Y++ P +A D I+ G+V +
Sbjct: 61 EISEDKTKIRRSPSKPLPEVTDEYKNDVKNRSVYIKGFPTDATLDDIKEWLEDKGQVLNI 120
Query: 227 SLPKFKSTGKLKGFAFVEFSTKEEAAK 253
+ + KG F F + E A K
Sbjct: 121 QMRRTLHKA-FKGSIFAVFDSIESAKK 146
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 47/70 (67%), Gaps = 3/70 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--LL 57
+++Y D NL +D+F + ++ + + + + +K N+L RLT D + +V+AL KSK L+
Sbjct: 1 LQYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLTTDFNIIVEALSKSKAELM 60
Query: 58 EVTEDGTKVK 67
E++ED TK++
Sbjct: 61 EISEDKTKIR 70
>gi|428178465|gb|EKX47340.1| hypothetical protein GUITHDRAFT_54382, partial [Guillardia theta
CCMP2712]
Length = 187
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 73/147 (49%), Gaps = 7/147 (4%)
Query: 112 QIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN--KLARLTHDPDDVVKALRK 169
+I +EFY DSNL KDRF +E+PE VS+ L + K+ L + A
Sbjct: 1 KIKKQIEFYFCDSNLPKDRFLLSKTKETPEGWVSLELIASFKKMRELGATTSKLAVAAAA 60
Query: 170 SKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLP 229
S LEV ++ T+VRRT + + +++ ++ P + + +ES FS YG V V L
Sbjct: 61 SDFLEVDQEVTRVRRTTPLPETDVTIPRSLHAKEFPGDTGIEQLESFFSGYGTVLSVRLL 120
Query: 230 KFKSTGKLKG-----FAFVEFSTKEEA 251
K AF+EFS+KEEA
Sbjct: 121 KADKKANADSDTAPISAFIEFSSKEEA 147
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN--KLARLTHDPDDVVKALRKSKLLE 58
+EFY DSNL KDRF +E+PE VS+ L + K+ L + A S LE
Sbjct: 6 IEFYFCDSNLPKDRFLLSKTKETPEGWVSLELIASFKKMRELGATTSKLAVAAAASDFLE 65
Query: 59 VTEDGTKVK 67
V ++ T+V+
Sbjct: 66 VDQEVTRVR 74
>gi|224114319|ref|XP_002316726.1| predicted protein [Populus trichocarpa]
gi|222859791|gb|EEE97338.1| predicted protein [Populus trichocarpa]
Length = 301
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 64/116 (55%), Gaps = 4/116 (3%)
Query: 117 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 174
+E+Y SD NL D++ L++++ E + ++V K+ +LT D +V ALR+S +L
Sbjct: 5 VEYYFSDENLPTDKYMISLIKKNKEGFVPITVIASFRKMKKLTQDSTFIVAALRESSILV 64
Query: 175 VTEDGTKVRR--TVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSL 228
V DG KV+R + D CT+ VE LP + + ++ +F GK+ +S+
Sbjct: 65 VNSDGKKVKRLDPFHFAEVKDPKLCTVLVENLPEDHSLNNLQRIFGAAGKIKNISI 120
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
+E+Y SD NL D++ L++++ E + ++V K+ +LT D +V ALR+S +L
Sbjct: 5 VEYYFSDENLPTDKYMISLIKKNKEGFVPITVIASFRKMKKLTQDSTFIVAALRESSILV 64
Query: 59 VTEDGTKVK 67
V DG KVK
Sbjct: 65 VNSDGKKVK 73
>gi|50553422|ref|XP_504122.1| YALI0E18854p [Yarrowia lipolytica]
gi|49649991|emb|CAG79717.1| YALI0E18854p [Yarrowia lipolytica CLIB122]
Length = 406
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 93/217 (42%), Gaps = 42/217 (19%)
Query: 113 IMNLMEFYLSDSNLRKDRFFSQLLQES----PEIEVSVFLKCNKLARL-THDPDDV-VKA 166
I+ +EFY SD NL D+F + + + P ++ F + + A DP V V A
Sbjct: 136 ILKQVEFYFSDQNLPTDKFLWKAVHSNDGWVPIHTIASFKRMQQFANPEAEDPLAVIVSA 195
Query: 167 LRKS-KLLEVTEDGTKVRRTVVVQ-----DKPDVDECTIYVEKLPPE------------- 207
LRKS LLEV+EDGTKV+R +Q K + + T+Y + PE
Sbjct: 196 LRKSPSLLEVSEDGTKVKRVKALQAPDDKSKDEANARTVYAKGFLPEDKVPTKDTPASEL 255
Query: 208 ----------AEHDYIESVFSKYGKVTYVSL-PKFKSTGKLKGFAFVEFSTKEEAAKALE 256
A IE F YGK+ V L + + + KG F EF E+A K L
Sbjct: 256 GAPLTREEELALQIEIEKFFEGYGKIVQVRLRRRTEQQNRFKGSVFAEFEKLEDATKFLA 315
Query: 257 LGLNPCPPDYQSSILTTTSRLSF---GITPLGFESGG 290
L P +Q L T S+ ++ LGF G
Sbjct: 316 LDPKPT---FQGRELKTMSKPAYCEMKKAELGFTDGA 349
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 42/74 (56%), Gaps = 7/74 (9%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQES----PEIEVSVFLKCNKLARL-THDPDDV-VKALRKS 54
+EFY SD NL D+F + + + P ++ F + + A DP V V ALRKS
Sbjct: 140 VEFYFSDQNLPTDKFLWKAVHSNDGWVPIHTIASFKRMQQFANPEAEDPLAVIVSALRKS 199
Query: 55 -KLLEVTEDGTKVK 67
LLEV+EDGTKVK
Sbjct: 200 PSLLEVSEDGTKVK 213
>gi|335302965|ref|XP_001925033.2| PREDICTED: lupus La protein homolog [Sus scrofa]
Length = 401
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 83/155 (53%), Gaps = 11/155 (7%)
Query: 109 LYQQIMNLMEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKAL 167
L +I + +E+Y D NL +D+F + ++ + + + + +K N+L RLT D + +++AL
Sbjct: 13 LEAKICHQIEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLTTDFNVIIEAL 72
Query: 168 RKSK--LLEVTEDGTKVRRT-------VVVQDKPDVDECTIYVEKLPPEAEHDYIESVFS 218
KSK L+E++ED TK+RR+ V + K D+ ++YV+ P +A D I+
Sbjct: 73 SKSKAELMEISEDKTKIRRSPSKPLPEVTDEYKNDLKNRSVYVKGFPTDATLDDIKDWLE 132
Query: 219 KYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAK 253
G++ + + + KG F F + E A K
Sbjct: 133 DKGEILNIQMRRTLHKT-FKGSIFAVFDSIESAKK 166
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 47/70 (67%), Gaps = 3/70 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--LL 57
+E+Y D NL +D+F + ++ + + + + +K N+L RLT D + +++AL KSK L+
Sbjct: 21 IEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLTTDFNVIIEALSKSKAELM 80
Query: 58 EVTEDGTKVK 67
E++ED TK++
Sbjct: 81 EISEDKTKIR 90
>gi|449433581|ref|XP_004134576.1| PREDICTED: la protein homolog [Cucumis sativus]
Length = 388
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 85/163 (52%), Gaps = 16/163 (9%)
Query: 109 LYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKA 166
L Q+I+ +E+Y SD NL D++ L++++ E + +++ ++ +LTHD + A
Sbjct: 70 LKQRIVKQVEYYFSDENLPSDKYLLGLVKKNKEGYVPIAIIASFKRMRKLTHDRSFITAA 129
Query: 167 LRKSKLLEVTEDGTKVRR--TVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVT 224
LR+S +L V+ +G KV+R + + + D TI VE LP + + ++ +F G++
Sbjct: 130 LRESSVLVVSSNGKKVKRLHPISLPETRDPKLFTILVENLPEDHSEENMKRIFGVAGRIR 189
Query: 225 YVSLPKFKSTGKL----KG--------FAFVEFSTKEEAAKAL 255
+++ KL KG A VE+ T E + KA+
Sbjct: 190 SITICDPHVVDKLGKSSKGDVLISNKLHALVEYETLEASEKAV 232
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 48/82 (58%), Gaps = 8/82 (9%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
+E+Y SD NL D++ L++++ E + +++ ++ +LTHD + ALR+S +L
Sbjct: 78 VEYYFSDENLPSDKYLLGLVKKNKEGYVPIAIIASFKRMRKLTHDRSFITAALRESSVLV 137
Query: 59 VTEDGTKVKGNIIRHFLVPISM 80
V+ +G KVK L PIS+
Sbjct: 138 VSSNGKKVK------RLHPISL 153
>gi|297794633|ref|XP_002865201.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297311036|gb|EFH41460.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 432
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 79/160 (49%), Gaps = 14/160 (8%)
Query: 109 LYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKA 166
L Q+I+ +E+Y SD NL D+F ++ + + + +S +K+ +LT D +V A
Sbjct: 104 LKQKIIRQVEYYFSDENLPTDKFLLNAMKRNKKGFVPISTIATFHKMKKLTRDHALIVSA 163
Query: 167 LRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYV 226
L++S L V+ D KV+R + + D T+ VE LP + + I +F K G + V
Sbjct: 164 LKESSFLVVSSDEKKVKRLSPLPEVRDPKIFTVLVENLPEDHSDENIREIFGKAGSIKSV 223
Query: 227 SL------------PKFKSTGKLKGFAFVEFSTKEEAAKA 254
S+ K + + + AFVE+ T E A KA
Sbjct: 224 SICDPNAAEEPEKGAKKEKFIRTRLHAFVEYETVEAAEKA 263
Score = 40.4 bits (93), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
+E+Y SD NL D+F ++ + + + +S +K+ +LT D +V AL++S L
Sbjct: 112 VEYYFSDENLPTDKFLLNAMKRNKKGFVPISTIATFHKMKKLTRDHALIVSALKESSFLV 171
Query: 59 VTEDGTKVK 67
V+ D KVK
Sbjct: 172 VSSDEKKVK 180
>gi|359483861|ref|XP_002276730.2| PREDICTED: la-related protein 6-like [Vitis vinifera]
gi|297740679|emb|CBI30861.3| unnamed protein product [Vitis vinifera]
Length = 342
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 80/162 (49%), Gaps = 20/162 (12%)
Query: 112 QIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRK 169
+I+ +E+Y SD NL D++ LL++ + ++V K+ +LT D +V ALR+
Sbjct: 43 KIIKQVEYYFSDENLPTDKYLMNLLKKDKNGFVPIAVIASFRKMKKLTQDIQLIVAALRE 102
Query: 170 SKLLEVTEDGTKVRR--TVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVS 227
S L V+ DG KV+R + + + D CT+ +E LP + + I+ +F G + +
Sbjct: 103 SSQLVVSSDGKKVKRLHPLSLTEVKDSKICTVLIENLPEDHSTENIQRIFGAAGNIKKIC 162
Query: 228 LPKFKST--------------GKLKGFAFVEFSTKEEAAKAL 255
+ +T GKL A V++ T E A +A+
Sbjct: 163 IHDPYATEESTKDSRVEKLISGKL--HAIVDYETVEAAERAV 202
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
+E+Y SD NL D++ LL++ + ++V K+ +LT D +V ALR+S L
Sbjct: 48 VEYYFSDENLPTDKYLMNLLKKDKNGFVPIAVIASFRKMKKLTQDIQLIVAALRESSQLV 107
Query: 59 VTEDGTKVK 67
V+ DG KVK
Sbjct: 108 VSSDGKKVK 116
>gi|320581838|gb|EFW96057.1| hypothetical protein HPODL_2340 [Ogataea parapolymorpha DL-1]
Length = 239
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 93/179 (51%), Gaps = 15/179 (8%)
Query: 109 LYQQIMNLMEFYLSDSNLRKDRF-FSQLLQESPEIEVSVFLKCNKLARLTHDP-DDVVKA 166
L +I++ +EFY SDSNL D+F F+ + +SV + ++ + + P + +V+A
Sbjct: 6 LKPKILSQVEFYFSDSNLLNDKFLFTTQQANDGWVPISVISQFERMKK--YRPIETIVEA 63
Query: 167 LRKSK-LLEVTEDGTKVRRTVVVQDKPD-----VDECTIYVEKLPPEAEHDYIESVFSKY 220
LR+S+ LLEV+E+G VRR + + +++ +++VE LP +A D + F K+
Sbjct: 64 LRQSESLLEVSENGEMVRRKTPLPANQNEVQVAINKRSVFVEHLPEDATLDELIEFFGKF 123
Query: 221 GKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNPCPPDYQSSILTTTSRLSF 279
V V + K K G FVEF +E+A K + P Y L S++S+
Sbjct: 124 APVNQVRMK--KRDKKFVGSVFVEFKKEEDAQKFVSAEEKPK---YNDKELNVISKVSY 177
>gi|430813205|emb|CCJ29430.1| unnamed protein product [Pneumocystis jirovecii]
Length = 319
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 80/147 (54%), Gaps = 15/147 (10%)
Query: 111 QQIMNLMEFYLSDSNLRKDRFFSQLLQESPE-IEVSVFLKCNKLARLTHDPDDVVKALRK 169
+ I+ +EFY SDSNL D+F Q++ + + + K ++ R + +VKALR
Sbjct: 64 EAILQQVEFYFSDSNLPFDKFLWNTSQKNDGWVSIELISKFKRMRRF-RPIEAIVKALRT 122
Query: 170 SK-LLEVTEDGTKVRR-TVVVQDKPDVDECT------IYVEKLPPEAEHDY--IESVFSK 219
SK LLE++EDG VRR T +V KP +E T +YV+ E + IE+ F K
Sbjct: 123 SKDLLEISEDGEYVRRKTPLV--KPGENEKTAYIRRSVYVKGFGEETKTSQIDIENFFKK 180
Query: 220 YGKVTYVSLPKFKSTGKLKGFAFVEFS 246
YGK+ V L + + G KG AF EF+
Sbjct: 181 YGKINVVRLRR-EDDGTFKGSAFCEFA 206
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE-IEVSVFLKCNKLARLTHDPDDVVKALRKSK-LLE 58
+EFY SDSNL D+F Q++ + + + K ++ R + +VKALR SK LLE
Sbjct: 70 VEFYFSDSNLPFDKFLWNTSQKNDGWVSIELISKFKRMRRF-RPIEAIVKALRTSKDLLE 128
Query: 59 VTEDGTKVK 67
++EDG V+
Sbjct: 129 ISEDGEYVR 137
>gi|393219334|gb|EJD04821.1| hypothetical protein FOMMEDRAFT_120041 [Fomitiporia mediterranea
MF3/22]
Length = 506
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 80/165 (48%), Gaps = 11/165 (6%)
Query: 117 MEFYLSDSNLRKDRFFSQLLQESPEIEVSV-----FLKCNKLARLTHDPDDVVKALRKSK 171
+EFY SDSNL DRF L + E V + F + + + L +D +V ALR S
Sbjct: 65 IEFYFSDSNLPYDRFMWTLHTANAEHWVPIKTVGSFKRMREFSSLGNDW--LVSALRPSL 122
Query: 172 LLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPE--AEHDYIESVFSKYGKVTYVSLP 229
LEV E GT VRR V++ E +IY + E + +E F +G+V V +
Sbjct: 123 ELEVEESGTNVRRRTEVKEPKGQFERSIYAKGFGSEYPGLQEELEKYFDAFGRVNAVRMR 182
Query: 230 KFKSTGKLKGFAFVEFSTKEEAAKALELGLNPCPPDYQSSILTTT 274
+ T + KG FVE++ A + L L+P P + +LT +
Sbjct: 183 RKYDTKEFKGSVFVEYADVSSAERF--LSLDPKPKWKDTELLTMS 225
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 38/72 (52%), Gaps = 7/72 (9%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSV-----FLKCNKLARLTHDPDDVVKALRKSK 55
+EFY SDSNL DRF L + E V + F + + + L +D +V ALR S
Sbjct: 65 IEFYFSDSNLPYDRFMWTLHTANAEHWVPIKTVGSFKRMREFSSLGNDW--LVSALRPSL 122
Query: 56 LLEVTEDGTKVK 67
LEV E GT V+
Sbjct: 123 ELEVEESGTNVR 134
>gi|350535483|ref|NP_001232430.1| putative Sjogren syndrome antigen B variant 2 [Taeniopygia guttata]
gi|197129934|gb|ACH46432.1| putative Sjogren syndrome antigen B variant 2 [Taeniopygia guttata]
Length = 407
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 84/160 (52%), Gaps = 13/160 (8%)
Query: 109 LYQQIMNLMEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKAL 167
L +I +E+Y + NL +D+F + ++ + + + V +K N+L+RL+ D +V+AL
Sbjct: 13 LESKICQQIEYYFGNHNLPRDKFLKEQIKLDDGWVPLEVMIKFNRLSRLSKDFGVIVEAL 72
Query: 168 RKSK--LLEVTEDGTKVRRT-------VVVQDKPDVDECTIYVEKLPPEAEHDYIESVFS 218
RKSK L+E+ ED TK+RR+ + Q K + ++YV+ P +A D I+
Sbjct: 73 RKSKTGLMEINEDKTKIRRSPNKPLPELNDQYKAAIKNRSVYVKGFPLDATLDDIKEWLE 132
Query: 219 KYGKVTYVSLPK-FKSTGKLKGFAFVEFSTKEEAAKALEL 257
G V + + + + T KG F F + E A K E+
Sbjct: 133 DKGPVENIQMRRTLQRT--FKGSIFAVFDSVESAKKFTEI 170
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 47/70 (67%), Gaps = 3/70 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--LL 57
+E+Y + NL +D+F + ++ + + + V +K N+L+RL+ D +V+ALRKSK L+
Sbjct: 21 IEYYFGNHNLPRDKFLKEQIKLDDGWVPLEVMIKFNRLSRLSKDFGVIVEALRKSKTGLM 80
Query: 58 EVTEDGTKVK 67
E+ ED TK++
Sbjct: 81 EINEDKTKIR 90
>gi|354467064|ref|XP_003495991.1| PREDICTED: lupus La protein homolog [Cricetulus griseus]
Length = 422
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 82/155 (52%), Gaps = 11/155 (7%)
Query: 109 LYQQIMNLMEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKAL 167
L +I + +E+Y D NL +D+F + ++ + + + + +K N+L RLT D + +V+AL
Sbjct: 13 LEAKICHQIEYYFGDFNLPRDKFLKEQIKLDEGWVPLDIMIKFNRLNRLTTDFNVIVQAL 72
Query: 168 RKS--KLLEVTEDGTKVRRT-------VVVQDKPDVDECTIYVEKLPPEAEHDYIESVFS 218
KS KL+EV+ D TK+RR+ V + K DV ++Y++ P +A D I+
Sbjct: 73 SKSKAKLMEVSADKTKIRRSPSRPLPEVTDEYKNDVKNRSVYIKGFPTDATLDDIKEWLD 132
Query: 219 KYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAK 253
G++ + + + KG F F + + A K
Sbjct: 133 DKGQILNIQMRRTLHK-TFKGSIFAVFDSIQSAKK 166
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 46/70 (65%), Gaps = 3/70 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKALRKS--KLL 57
+E+Y D NL +D+F + ++ + + + + +K N+L RLT D + +V+AL KS KL+
Sbjct: 21 IEYYFGDFNLPRDKFLKEQIKLDEGWVPLDIMIKFNRLNRLTTDFNVIVQALSKSKAKLM 80
Query: 58 EVTEDGTKVK 67
EV+ D TK++
Sbjct: 81 EVSADKTKIR 90
>gi|449275409|gb|EMC84281.1| Lupus La protein like protein [Columba livia]
Length = 406
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 84/160 (52%), Gaps = 13/160 (8%)
Query: 109 LYQQIMNLMEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKAL 167
L +I +E+Y + NL +D+F + ++ + + + V +K N+L+RL+ D +V+AL
Sbjct: 13 LENKICQQIEYYFGNHNLPRDKFLKEQIKLDDGWVPLEVMIKFNRLSRLSKDFSVIVEAL 72
Query: 168 RKSK--LLEVTEDGTKVRRT-------VVVQDKPDVDECTIYVEKLPPEAEHDYIESVFS 218
RKSK L+E+ ED TK+RR+ + Q K + ++YV+ P +A D I+
Sbjct: 73 RKSKTGLMEINEDKTKIRRSPNKPLPELNDQYKAAIKNRSVYVKGFPLDATLDDIKEWLE 132
Query: 219 KYGKVTYVSLPK-FKSTGKLKGFAFVEFSTKEEAAKALEL 257
G V + + + + T KG F F + E A K E+
Sbjct: 133 DKGPVENIQMRRTLQRT--FKGSIFAVFDSVESAKKFTEI 170
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 47/70 (67%), Gaps = 3/70 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--LL 57
+E+Y + NL +D+F + ++ + + + V +K N+L+RL+ D +V+ALRKSK L+
Sbjct: 21 IEYYFGNHNLPRDKFLKEQIKLDDGWVPLEVMIKFNRLSRLSKDFSVIVEALRKSKTGLM 80
Query: 58 EVTEDGTKVK 67
E+ ED TK++
Sbjct: 81 EINEDKTKIR 90
>gi|326922764|ref|XP_003207615.1| PREDICTED: lupus La protein homolog [Meleagris gallopavo]
Length = 404
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 84/160 (52%), Gaps = 13/160 (8%)
Query: 109 LYQQIMNLMEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKAL 167
L +I +E+Y + NL +D+F + ++ + + + V +K N+L+RL+ D +V+AL
Sbjct: 13 LESKICQQIEYYFGNHNLPRDKFLKEQIKLDDGWVPLEVMIKFNRLSRLSKDFGVIVEAL 72
Query: 168 RKSK--LLEVTEDGTKVRRT-------VVVQDKPDVDECTIYVEKLPPEAEHDYIESVFS 218
RKSK L+E+ ED TK+RR+ + Q K + ++YV+ P +A D I+
Sbjct: 73 RKSKTGLMEINEDKTKIRRSPNKPLPELNDQYKAAIKNRSVYVKGFPLDATLDDIKEWLE 132
Query: 219 KYGKVTYVSLPK-FKSTGKLKGFAFVEFSTKEEAAKALEL 257
G V + + + + T KG F F + E A K E+
Sbjct: 133 DKGPVENIQMRRTLQKT--FKGSIFAVFDSVESAKKFTEI 170
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 47/70 (67%), Gaps = 3/70 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--LL 57
+E+Y + NL +D+F + ++ + + + V +K N+L+RL+ D +V+ALRKSK L+
Sbjct: 21 IEYYFGNHNLPRDKFLKEQIKLDDGWVPLEVMIKFNRLSRLSKDFGVIVEALRKSKTGLM 80
Query: 58 EVTEDGTKVK 67
E+ ED TK++
Sbjct: 81 EINEDKTKIR 90
>gi|302488427|ref|NP_001180598.1| Sjogren syndrome antigen B (autoantigen La) isoform 1 [Gallus
gallus]
Length = 404
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 84/160 (52%), Gaps = 13/160 (8%)
Query: 109 LYQQIMNLMEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKAL 167
L +I +E+Y + NL +D+F + ++ + + + V +K N+L+RL+ D +V+AL
Sbjct: 13 LESKICQQIEYYFGNHNLPRDKFLKEQIKLDDGWVPLEVMIKFNRLSRLSKDFGVIVEAL 72
Query: 168 RKSK--LLEVTEDGTKVRRT-------VVVQDKPDVDECTIYVEKLPPEAEHDYIESVFS 218
RKSK L+E+ ED TK+RR+ + Q K + ++YV+ P +A D I+
Sbjct: 73 RKSKTGLMEINEDKTKIRRSPNKPLPELNDQYKAAIKNRSVYVKGFPLDATLDDIKEWLE 132
Query: 219 KYGKVTYVSLPK-FKSTGKLKGFAFVEFSTKEEAAKALEL 257
G V + + + + T KG F F + E A K E+
Sbjct: 133 DKGPVENIQMRRTLQKT--FKGSIFAVFDSVESAKKFTEI 170
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 47/70 (67%), Gaps = 3/70 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--LL 57
+E+Y + NL +D+F + ++ + + + V +K N+L+RL+ D +V+ALRKSK L+
Sbjct: 21 IEYYFGNHNLPRDKFLKEQIKLDDGWVPLEVMIKFNRLSRLSKDFGVIVEALRKSKTGLM 80
Query: 58 EVTEDGTKVK 67
E+ ED TK++
Sbjct: 81 EINEDKTKIR 90
>gi|149022177|gb|EDL79071.1| Sjogren syndrome antigen B, isoform CRA_c [Rattus norvegicus]
gi|149022180|gb|EDL79074.1| Sjogren syndrome antigen B, isoform CRA_c [Rattus norvegicus]
Length = 271
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 84/165 (50%), Gaps = 11/165 (6%)
Query: 99 DGGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLT 157
+ G + L +I + +E+Y D NL +D+F + ++ + + + +K N+L RLT
Sbjct: 3 ENGDNEKMAALEAKICHQIEYYFGDFNLPRDKFLKEQIKLDEGWVPLETMIKFNRLNRLT 62
Query: 158 HDPDDVVKALRKSK--LLEVTEDGTKVRRT-------VVVQDKPDVDECTIYVEKLPPEA 208
D + +V+AL KSK L+EV+ D TK+RR+ V + K DV ++Y++ P +A
Sbjct: 63 TDFNVIVQALSKSKANLMEVSADKTKIRRSPSRPLPEVTDEYKNDVKNRSVYIKGFPTDA 122
Query: 209 EHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAK 253
D I+ G++ + + + KG F F + + A K
Sbjct: 123 TLDDIKEWLDDKGQILNIQMRR-TLHKTFKGSIFAVFDSIQSAKK 166
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 45/70 (64%), Gaps = 3/70 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--LL 57
+E+Y D NL +D+F + ++ + + + +K N+L RLT D + +V+AL KSK L+
Sbjct: 21 IEYYFGDFNLPRDKFLKEQIKLDEGWVPLETMIKFNRLNRLTTDFNVIVQALSKSKANLM 80
Query: 58 EVTEDGTKVK 67
EV+ D TK++
Sbjct: 81 EVSADKTKIR 90
>gi|344239546|gb|EGV95649.1| Lupus La protein-like [Cricetulus griseus]
Length = 407
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 85/165 (51%), Gaps = 11/165 (6%)
Query: 99 DGGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLT 157
+ G + L +I + +E+Y D NL +D+F + ++ + + + + +K N+L RLT
Sbjct: 3 ENGDNEKMAALEAKICHQIEYYFGDFNLPRDKFLKEQIKLDEGWVPLDIMIKFNRLNRLT 62
Query: 158 HDPDDVVKALRKS--KLLEVTEDGTKVRRT-------VVVQDKPDVDECTIYVEKLPPEA 208
D + +V+AL KS KL+EV+ D TK+RR+ V + K DV ++Y++ P +A
Sbjct: 63 TDFNVIVQALSKSKAKLMEVSADKTKIRRSPSRPLPEVTDEYKNDVKNRSVYIKGFPTDA 122
Query: 209 EHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAK 253
D I+ G++ + + + KG F F + + A K
Sbjct: 123 TLDDIKEWLDDKGQILNIQMRRTLHK-TFKGSIFAVFDSIQSAKK 166
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 46/70 (65%), Gaps = 3/70 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKALRKS--KLL 57
+E+Y D NL +D+F + ++ + + + + +K N+L RLT D + +V+AL KS KL+
Sbjct: 21 IEYYFGDFNLPRDKFLKEQIKLDEGWVPLDIMIKFNRLNRLTTDFNVIVQALSKSKAKLM 80
Query: 58 EVTEDGTKVK 67
EV+ D TK++
Sbjct: 81 EVSADKTKIR 90
>gi|224103525|ref|XP_002313090.1| predicted protein [Populus trichocarpa]
gi|222849498|gb|EEE87045.1| predicted protein [Populus trichocarpa]
Length = 290
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 80/162 (49%), Gaps = 14/162 (8%)
Query: 109 LYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKA 166
L ++I+ +E+ SD +L + S+ + + PE + +SV K+ L D D + +A
Sbjct: 82 LRKKIIKQVEYQFSDMSLLANESMSKHINKDPEGYVPISVIASTKKMRSLVIDNDSLAQA 141
Query: 167 LRKSKLLEVTEDGTKVRRTVVVQDK--PDVDECTIYVEKLPPEAEHDYIESVFSKYGKVT 224
L+ S L +TEDG K++R + DK ++ + VE LP + H ++ +FS G V
Sbjct: 142 LKSSSKLSLTEDGKKIKRKIPFTDKDREELQSRIVVVENLPEDHSHQNVQKIFSVVGSVK 201
Query: 225 YVSL---PKFKSTGKLKGF-------AFVEFSTKEEAAKALE 256
+ + + S+G F A VE T++ A KA E
Sbjct: 202 TIRICHPHESNSSGAKNDFFVTNKLHALVELETRKIAEKAAE 243
Score = 41.2 bits (95), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
+E+ SD +L + S+ + + PE + +SV K+ L D D + +AL+ S L
Sbjct: 90 VEYQFSDMSLLANESMSKHINKDPEGYVPISVIASTKKMRSLVIDNDSLAQALKSSSKLS 149
Query: 59 VTEDGTKVKGNI 70
+TEDG K+K I
Sbjct: 150 LTEDGKKIKRKI 161
>gi|45383021|ref|NP_989911.1| Sjogren syndrome antigen B (autoantigen La) isoform 2 [Gallus
gallus]
gi|18643335|gb|AAL76269.1|AF467897_1 untranslated region binding-protein [Gallus gallus]
Length = 206
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 84/160 (52%), Gaps = 13/160 (8%)
Query: 109 LYQQIMNLMEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKAL 167
L +I +E+Y + NL +D+F + ++ + + + V +K N+L+RL+ D +V+AL
Sbjct: 13 LESKICQQIEYYFGNHNLPRDKFLKEQIKLDDGWVPLEVMIKFNRLSRLSKDFGVIVEAL 72
Query: 168 RKSK--LLEVTEDGTKVRRT-------VVVQDKPDVDECTIYVEKLPPEAEHDYIESVFS 218
RKSK L+E+ ED TK+RR+ + Q K + ++YV+ P +A D I+
Sbjct: 73 RKSKTGLMEINEDKTKIRRSPNKPLPELNDQYKAAIKNRSVYVKGFPLDATLDDIKEWLE 132
Query: 219 KYGKVTYVSLPK-FKSTGKLKGFAFVEFSTKEEAAKALEL 257
G V + + + + T KG F F + E A K E+
Sbjct: 133 DKGPVENIQMRRTLQKT--FKGSIFAVFDSVESAKKFTEI 170
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 47/70 (67%), Gaps = 3/70 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--LL 57
+E+Y + NL +D+F + ++ + + + V +K N+L+RL+ D +V+ALRKSK L+
Sbjct: 21 IEYYFGNHNLPRDKFLKEQIKLDDGWVPLEVMIKFNRLSRLSKDFGVIVEALRKSKTGLM 80
Query: 58 EVTEDGTKVK 67
E+ ED TK++
Sbjct: 81 EINEDKTKIR 90
>gi|219362861|ref|NP_001136552.1| uncharacterized protein LOC100216671 [Zea mays]
gi|194696148|gb|ACF82158.1| unknown [Zea mays]
Length = 437
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 107/235 (45%), Gaps = 18/235 (7%)
Query: 37 LARLTHDPDDVVKALRKSKLLEVTEDGTKVKGNIIRHFLVPISMETEASDNVDKDLSDLQ 96
L +T DP V L+ + EV +D V +I++ ++ + A+D ++ S+
Sbjct: 50 LYNVTRDPLTVSDELQPTG--EVVDDALLVAPDIVKGEVMEDDILPVATDIINDAASECP 107
Query: 97 RKDGGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLA 154
G +L +I+ +E+Y SD NL D F ++++ + + + + ++
Sbjct: 108 EAGSDGVVLTDELRNRIVKQVEYYFSDENLPTDEFLLNYVKKNNKGFVPIEIIASFRRMK 167
Query: 155 RLTHDPDDVVKALRKSKLLEVTEDGTKVRRTVVVQDK--PDVDECTIYVEKLPPEAEHDY 212
+L D + ALR S L V+ +G +VRR + K D + T+ VE LPP+ +
Sbjct: 168 KLVQDLSVIEAALRTSSKLVVSSNGKRVRRLHPLPHKELKDSKKSTVLVENLPPDFSMES 227
Query: 213 IESVFSKYGKVTYV------SLPKFKSTGK------LKGFAFVEFSTKEEAAKAL 255
I+ F+ GKV + S+ +F + K K VE+ E A KA+
Sbjct: 228 IQEKFATVGKVVNITINDPESVKEFSTAKKPDFNLSFKAHVLVEYEAVEAAEKAV 282
>gi|168027968|ref|XP_001766501.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682410|gb|EDQ68829.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 913
Score = 64.7 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 41/124 (33%), Positives = 62/124 (50%), Gaps = 4/124 (3%)
Query: 109 LYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKA 166
L +I+ +EFY SD+NL D + + +++ PE + + V K+ L + V A
Sbjct: 386 LKAKIVKQVEFYFSDANLPTDNYLMKFVKKDPEGFVPIPVVALFRKIKNLVKNHSVVAAA 445
Query: 167 LRKSKLLEVTEDGTKVRRTVVVQ--DKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVT 224
LR S L V+EDG KVRR + D ++ T+ E LP + IE +F K G V
Sbjct: 446 LRSSTQLVVSEDGKKVRRAHPLPEVDLEEIQARTVVAENLPENPSIETIEPLFRKVGTVK 505
Query: 225 YVSL 228
V +
Sbjct: 506 MVRI 509
Score = 46.6 bits (109), Expect = 0.012, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
+EFY SD+NL D + + +++ PE + + V K+ L + V ALR S L
Sbjct: 394 VEFYFSDANLPTDNYLMKFVKKDPEGFVPIPVVALFRKIKNLVKNHSVVAAALRSSTQLV 453
Query: 59 VTEDGTKVK 67
V+EDG KV+
Sbjct: 454 VSEDGKKVR 462
>gi|290987654|ref|XP_002676537.1| predicted protein [Naegleria gruberi]
gi|284090140|gb|EFC43793.1| predicted protein [Naegleria gruberi]
Length = 191
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 109 LYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKA 166
+ +++ +E SD +L +D F + + E+ + +++ + N++ ++T D + ++KA
Sbjct: 11 ISRRVREAIELLFSDCSLPRDTFLKERIAENKDGYVDLETITQFNRIQQITTDMNLIIKA 70
Query: 167 LRKSKLLEVTEDGTKVRRTVVVQDKPDVDEC---TIYVEKLPPE---AEHDYIESVFSKY 220
L KS +L+ TK+RR V + P + T++V++ P + I+ F Y
Sbjct: 71 LSKSFMLQFDSQNTKIRRRVAL--PPSIQTTHTRTLFVKRFPLNESIVTPEKIKQCFDAY 128
Query: 221 GKVTYVSLPKFKSTGKLKGFAFVEFSTK 248
GKV YV L + + + K G AFVEF ++
Sbjct: 129 GKVVYVGLNREQHSEKFTGSAFVEFDSE 156
Score = 38.1 bits (87), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 47/84 (55%), Gaps = 6/84 (7%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
+E SD +L +D F + + E+ + +++ + N++ ++T D + ++KAL KS +L+
Sbjct: 19 IELLFSDCSLPRDTFLKERIAENKDGYVDLETITQFNRIQQITTDMNLIIKALSKSFMLQ 78
Query: 59 VTEDGTKVKGNIIRHFLVPISMET 82
TK++ R +P S++T
Sbjct: 79 FDSQNTKIR----RRVALPPSIQT 98
>gi|255561665|ref|XP_002521842.1| lupus la ribonucleoprotein, putative [Ricinus communis]
gi|223538880|gb|EEF40478.1| lupus la ribonucleoprotein, putative [Ricinus communis]
Length = 440
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 81/162 (50%), Gaps = 14/162 (8%)
Query: 109 LYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKA 166
L Q+I+ +E+ D +L + S+ + + PE + +SV K+ L ++ + +A
Sbjct: 132 LRQKILKQVEYQFGDMSLLANESMSKHISKDPEGYVPISVIASTKKMKSLVNNNHLLAQA 191
Query: 167 LRKSKLLEVTEDGTKVRRTV--VVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVT 224
L+ S L V+ED KV+R + +D+ ++ T+ VE LP + H +E +FS G V
Sbjct: 192 LQSSSKLVVSEDNKKVKRKLPFTEKDREELQSRTVVVENLPEDHSHQNLEKIFSVVGSVK 251
Query: 225 YVSL--PKFKSTGKLKG--------FAFVEFSTKEEAAKALE 256
+ + P+ ++ + K A VEF E A KA+E
Sbjct: 252 TIRICHPQESNSSRTKSDFFMSNKLHALVEFEGSEAAEKAVE 293
>gi|50761032|ref|XP_418213.1| PREDICTED: uncharacterized protein LOC420093 [Gallus gallus]
Length = 432
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 93/184 (50%), Gaps = 30/184 (16%)
Query: 108 QLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN--KLARLTHDPDDVVK 165
QL ++I++ +EFYLSD NL KD F + +Q++ VS+ L + K+ LT D +
Sbjct: 76 QLIRRIVSQVEFYLSDENLAKDAFLLKHVQKNKLGFVSIKLLTSFKKVKYLTRDWRLTLY 135
Query: 166 ALRKSKLLEVTEDGTKVRRTVVVQDK----PDVDECTIYVEKLPPEA------EHDYIES 215
ALR SKLLEV ++GTKVRR V + D P + + + LP E + ++IE+
Sbjct: 136 ALRFSKLLEVNQEGTKVRRRVPIPDSILNIPPT-KLLLAWDPLPLEPGTPLPLQKNFIET 194
Query: 216 V---FSKYGKVTYVSL--PKFKSTGKLKGF------------AFVEFSTKEEAAKALELG 258
+ FS +G + + + P K ++ + A VE+ + E A +A E
Sbjct: 195 ITQMFSPFGAIASIRILRPGRKLPSDVRKYATRFPELLSHRCALVEYESLESARRACEEL 254
Query: 259 LNPC 262
PC
Sbjct: 255 GQPC 258
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 44/69 (63%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN--KLARLTHDPDDVVKALRKSKLLE 58
+EFYLSD NL KD F + +Q++ VS+ L + K+ LT D + ALR SKLLE
Sbjct: 85 VEFYLSDENLAKDAFLLKHVQKNKLGFVSIKLLTSFKKVKYLTRDWRLTLYALRFSKLLE 144
Query: 59 VTEDGTKVK 67
V ++GTKV+
Sbjct: 145 VNQEGTKVR 153
>gi|126644000|ref|XP_001388165.1| hypothetical protein [Cryptosporidium parvum Iowa II]
gi|126117242|gb|EAZ51342.1| unnamed protein product [Cryptosporidium parvum Iowa II]
Length = 163
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 69/132 (52%), Gaps = 18/132 (13%)
Query: 117 MEFYLSDSNLRKDRFFSQLLQE-----SPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK 171
+EFY SDSN+R D++F L E + I +S+ NK+ L D++ +L SK
Sbjct: 23 IEFYFSDSNIRHDKYFRSKLTEYKYLHNFGIPISLISTFNKMIELNASVQDIINSLSSSK 82
Query: 172 LLEVTEDGTKVRRTVVVQDKP-DVDECTI-------YVEKLPPEAEHDYIESVFSKYGKV 223
++ V + + R KP ++D CT+ +++ +P + H+ ++S+ ++GKV
Sbjct: 83 VVFVNIETLTIHRF-----KPINIDLCTVIPRDKMLFIKSIPTKWNHNNVKSLLGRFGKV 137
Query: 224 TYVSLPKFKSTG 235
+ V LPK +
Sbjct: 138 SVVKLPKINKSN 149
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 5/65 (7%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQE-----SPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK 55
+EFY SDSN+R D++F L E + I +S+ NK+ L D++ +L SK
Sbjct: 23 IEFYFSDSNIRHDKYFRSKLTEYKYLHNFGIPISLISTFNKMIELNASVQDIINSLSSSK 82
Query: 56 LLEVT 60
++ V
Sbjct: 83 VVFVN 87
>gi|359806823|ref|NP_001241310.1| uncharacterized protein LOC100807619 [Glycine max]
gi|255636971|gb|ACU18818.1| unknown [Glycine max]
Length = 405
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 96/202 (47%), Gaps = 23/202 (11%)
Query: 112 QIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRK 169
+I+ +E+Y SD NL D++ ++ + E + VSV K+ +LT D +V AL++
Sbjct: 106 KIIKQVEYYFSDENLPTDKYLLGFVKRNKEGFVPVSVIASFRKIKKLTRDHAFIVAALKE 165
Query: 170 SKLLEVTEDGTKVRR--TVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVS 227
S LL V+ DG +V+R + + D T+ VE LP + I+ +F + G + ++
Sbjct: 166 SSLLVVSGDGKRVKRLNPLRFNESRDHKLYTVLVENLPEDHSRKNIQQIFHEAGNIKRIT 225
Query: 228 LPKFKSTGKL------------KGFAFVEFSTKEEAAKALELGLNPCPPDYQSSILTTTS 275
+ ST + K A VE+ T E A KA+ + N D+++ +
Sbjct: 226 IHDPHSTSESTRHIKQEMLISNKLHALVEYETIEAAEKAVAMLNNEQ--DWRNGMRV--- 280
Query: 276 RLSFGITPLGFESGGWWFKSSH 297
+L G+ G + W K SH
Sbjct: 281 KLLKGMGTYGHKKQAW--KGSH 300
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
+E+Y SD NL D++ ++ + E + VSV K+ +LT D +V AL++S LL
Sbjct: 111 VEYYFSDENLPTDKYLLGFVKRNKEGFVPVSVIASFRKIKKLTRDHAFIVAALKESSLLV 170
Query: 59 VTEDGTKVK 67
V+ DG +VK
Sbjct: 171 VSGDGKRVK 179
>gi|384252818|gb|EIE26293.1| hypothetical protein COCSUDRAFT_46027 [Coccomyxa subellipsoidea
C-169]
Length = 383
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 78/164 (47%), Gaps = 21/164 (12%)
Query: 117 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN--------KLARLTHDP-------- 160
+EFY SDSNL +D+F + + E PE V++ L C ++R D
Sbjct: 15 IEFYFSDSNLPRDKFLREKIAEDPEGWVNLELLCTFTRMTEALGISRKGKDGKVEVSRLI 74
Query: 161 -DDVVKALRKSKLLEVTEDGTKVRRTVVVQD----KPDVDECTIYVEKLPPEAEHDYIES 215
V +AL+ S + V+EDG VRRT ++ +VD +++ P + D + +
Sbjct: 75 LSQVAEALQGSDSITVSEDGRSVRRTKPIESPEEVSKEVDARSLFASPFPYDTTLDAVTA 134
Query: 216 VFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGL 259
F+ V V + + ++ +G FVEF+ +E+A + + L
Sbjct: 135 FFNTVAPVNCVRMRRHLNSSDFRGSVFVEFACEEQATEVMSKSL 178
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 47/106 (44%), Gaps = 23/106 (21%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN--------KLARLTHDP-------- 44
+EFY SDSNL +D+F + + E PE V++ L C ++R D
Sbjct: 15 IEFYFSDSNLPRDKFLREKIAEDPEGWVNLELLCTFTRMTEALGISRKGKDGKVEVSRLI 74
Query: 45 -DDVVKALRKSKLLEVTEDGTKVKGNIIRHFLVPISMETEASDNVD 89
V +AL+ S + V+EDG V+ PI E S VD
Sbjct: 75 LSQVAEALQGSDSITVSEDGRSVRRT------KPIESPEEVSKEVD 114
>gi|355750606|gb|EHH54933.1| hypothetical protein EGM_04041 [Macaca fascicularis]
Length = 405
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 86/168 (51%), Gaps = 11/168 (6%)
Query: 99 DGGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLT 157
+ G + L +I + +E+Y D NL +D+F + ++ + + + + +K N+L LT
Sbjct: 3 ENGDNEKMAALEAKICHQIEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNHLT 62
Query: 158 HDPDDVVKALRKSK--LLEVTEDGTKVRRT-------VVVQDKPDVDECTIYVEKLPPEA 208
+V+AL KSK L+E++ED TK+RR+ V + K DV ++Y++ P +A
Sbjct: 63 MVFSVIVEALSKSKAELMEISEDKTKIRRSPSKPLPEVTDEYKNDVKNRSVYIKGFPTDA 122
Query: 209 EHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
D I+ G+V + + + KG FV F + E A K +E
Sbjct: 123 TLDDIKEWLEDKGQVLNIQMRRTLHKA-FKGSIFVVFDSIESAKKFVE 169
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 44/70 (62%), Gaps = 3/70 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--LL 57
+E+Y D NL +D+F + ++ + + + + +K N+L LT +V+AL KSK L+
Sbjct: 21 IEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNHLTMVFSVIVEALSKSKAELM 80
Query: 58 EVTEDGTKVK 67
E++ED TK++
Sbjct: 81 EISEDKTKIR 90
>gi|402220478|gb|EJU00549.1| hypothetical protein DACRYDRAFT_23006 [Dacryopinax sp. DJM-731 SS1]
Length = 563
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 94/184 (51%), Gaps = 15/184 (8%)
Query: 108 QLYQQIMNLMEFYLSDSNLRKDRF-FSQLLQESPE--IEVSVFLKCNKLARLTHDPDD-- 162
++ +I+ +EFY S++NL D+F F+ +++PE + V ++ T
Sbjct: 75 EVKAKILQQVEFYFSEANLPFDKFLFTLSYKDNPEHWVPVGTIASFKRMREYTAAKGTAY 134
Query: 163 VVKALRKSKLLEVTEDGTKVRRTVVVQD-----KPDVDECTIYVEKLPPEAE--HDYIES 215
V AL+ S LLE++E G KVRR V +++ D +IY + EA+ + +E+
Sbjct: 135 VADALKPSTLLELSESGEKVRRKVALENLESRQSHDAFARSIYAKGFGEEAKGLQEELEA 194
Query: 216 VFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNPCPPDYQSSILTTTS 275
FS++GK V + + K T KG FVE+ A+K L + P ++ + LTT S
Sbjct: 195 FFSQFGKFNVVRMRRDKETKVFKGSVFVEWVDMITASKFL---MQEPKPRWKGTELTTMS 251
Query: 276 RLSF 279
+ ++
Sbjct: 252 KKAY 255
>gi|52138613|ref|NP_112381.2| lupus La protein homolog [Rattus norvegicus]
gi|51858592|gb|AAH81780.1| Sjogren syndrome antigen B [Rattus norvegicus]
gi|149022175|gb|EDL79069.1| Sjogren syndrome antigen B, isoform CRA_a [Rattus norvegicus]
gi|149022178|gb|EDL79072.1| Sjogren syndrome antigen B, isoform CRA_a [Rattus norvegicus]
Length = 415
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 81/155 (52%), Gaps = 11/155 (7%)
Query: 109 LYQQIMNLMEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKAL 167
L +I + +E+Y D NL +D+F + ++ + + + +K N+L RLT D + +V+AL
Sbjct: 13 LEAKICHQIEYYFGDFNLPRDKFLKEQIKLDEGWVPLETMIKFNRLNRLTTDFNVIVQAL 72
Query: 168 RKSK--LLEVTEDGTKVRRT-------VVVQDKPDVDECTIYVEKLPPEAEHDYIESVFS 218
KSK L+EV+ D TK+RR+ V + K DV ++Y++ P +A D I+
Sbjct: 73 SKSKANLMEVSADKTKIRRSPSRPLPEVTDEYKNDVKNRSVYIKGFPTDATLDDIKEWLD 132
Query: 219 KYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAK 253
G++ + + + KG F F + + A K
Sbjct: 133 DKGQILNIQMRRTLHK-TFKGSIFAVFDSIQSAKK 166
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 45/70 (64%), Gaps = 3/70 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--LL 57
+E+Y D NL +D+F + ++ + + + +K N+L RLT D + +V+AL KSK L+
Sbjct: 21 IEYYFGDFNLPRDKFLKEQIKLDEGWVPLETMIKFNRLNRLTTDFNVIVQALSKSKANLM 80
Query: 58 EVTEDGTKVK 67
EV+ D TK++
Sbjct: 81 EVSADKTKIR 90
>gi|47218066|emb|CAG09938.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1017
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 76/151 (50%), Gaps = 17/151 (11%)
Query: 119 FYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--LLEV 175
+Y D NL +D+F + +Q + + + LK N+L LT + +V AL+KSK LLE+
Sbjct: 1 YYFGDHNLPRDKFLKEQIQLDDGWVSLETMLKFNRLKTLTTESSVIVAALQKSKTGLLEI 60
Query: 176 TEDGTKVRRTVVVQDKP----------DVDECTIYVEKLPPEAEHDYIESVFSKYGKVTY 225
+ED TK+RR+ DKP + ++Y++ P E D I+ S G +
Sbjct: 61 SEDKTKIRRS---PDKPLPEMNDEYKDALKHKSVYIKGFPLETTLDEIQEWLSGKGNIEN 117
Query: 226 VSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
+ + K KG F+ F T+E + + LE
Sbjct: 118 IQMRKTLQR-NFKGSVFICFDTEESSKQFLE 147
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 3 FYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--LLEV 59
+Y D NL +D+F + +Q + + + LK N+L LT + +V AL+KSK LLE+
Sbjct: 1 YYFGDHNLPRDKFLKEQIQLDDGWVSLETMLKFNRLKTLTTESSVIVAALQKSKTGLLEI 60
Query: 60 TEDGTKVK 67
+ED TK++
Sbjct: 61 SEDKTKIR 68
>gi|149022176|gb|EDL79070.1| Sjogren syndrome antigen B, isoform CRA_b [Rattus norvegicus]
gi|149022179|gb|EDL79073.1| Sjogren syndrome antigen B, isoform CRA_b [Rattus norvegicus]
Length = 403
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 82/156 (52%), Gaps = 13/156 (8%)
Query: 109 LYQQIMNLMEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKAL 167
L +I + +E+Y D NL +D+F + ++ + + + +K N+L RLT D + +V+AL
Sbjct: 13 LEAKICHQIEYYFGDFNLPRDKFLKEQIKLDEGWVPLETMIKFNRLNRLTTDFNVIVQAL 72
Query: 168 RKSK--LLEVTEDGTKVRRT-------VVVQDKPDVDECTIYVEKLPPEAEHDYIESVFS 218
KSK L+EV+ D TK+RR+ V + K DV ++Y++ P +A D I+
Sbjct: 73 SKSKANLMEVSADKTKIRRSPSRPLPEVTDEYKNDVKNRSVYIKGFPTDATLDDIKEWLD 132
Query: 219 KYGKVTYVSLPK-FKSTGKLKGFAFVEFSTKEEAAK 253
G++ + + + T KG F F + + A K
Sbjct: 133 DKGQILNIQMRRTLHKT--FKGSIFAVFDSIQSAKK 166
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 45/70 (64%), Gaps = 3/70 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--LL 57
+E+Y D NL +D+F + ++ + + + +K N+L RLT D + +V+AL KSK L+
Sbjct: 21 IEYYFGDFNLPRDKFLKEQIKLDEGWVPLETMIKFNRLNRLTTDFNVIVQALSKSKANLM 80
Query: 58 EVTEDGTKVK 67
EV+ D TK++
Sbjct: 81 EVSADKTKIR 90
>gi|3063698|emb|CAA18589.1| putative protein [Arabidopsis thaliana]
gi|7270219|emb|CAB79989.1| putative protein [Arabidopsis thaliana]
Length = 483
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 87/181 (48%), Gaps = 34/181 (18%)
Query: 113 IMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN--------KLARLTHD--PDD 162
++ +EFY SDSNL D F + + ES + VS+ L C+ KL D P+D
Sbjct: 14 VLRQVEFYFSDSNLPIDDFLKKTVTESEDGLVSLALICSFSKMRGYLKLGDSKGDDIPED 73
Query: 163 VVKA----LRKSKLLEVTEDGTKVRRTVVVQDKPDVDEC----TIYVEKLPPEAEHDYIE 214
+KA LR S L++++DG KV R+ + D+ E T+ + + + +E
Sbjct: 74 TIKAVADTLRTSSALKISDDGKKVGRSTELLKLEDLIEQLNARTVAASPFSYDVKREDVE 133
Query: 215 SVFSKYGKVTYVS---------------LPKFKSTGKL-KGFAFVEFSTKEEAAKALELG 258
S FS+YGK+ Y S +P+ + ++ G A VEF T+E+A ++
Sbjct: 134 SFFSQYGKIGYTSFWYMYVSSLQVNSVRMPRHVAESRIFSGVALVEFPTEEDAQNVMKQN 193
Query: 259 L 259
L
Sbjct: 194 L 194
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 43/80 (53%), Gaps = 14/80 (17%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN--------KLARLTHD--PDDVVKA 50
+EFY SDSNL D F + + ES + VS+ L C+ KL D P+D +KA
Sbjct: 18 VEFYFSDSNLPIDDFLKKTVTESEDGLVSLALICSFSKMRGYLKLGDSKGDDIPEDTIKA 77
Query: 51 ----LRKSKLLEVTEDGTKV 66
LR S L++++DG KV
Sbjct: 78 VADTLRTSSALKISDDGKKV 97
>gi|294461472|gb|ADE76297.1| unknown [Picea sitchensis]
Length = 461
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 82/170 (48%), Gaps = 21/170 (12%)
Query: 106 KKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN--KLARLTHDPDDV 163
K L +++ +EFY SD+NL D++ + +++ PE V + N K+ L + V
Sbjct: 140 KAVLTEELRQKVEFYFSDANLPTDKYLMKFVKKDPEGFVPIPFLANFRKVKNLVSNHSLV 199
Query: 164 VKALRKSKLLEVTEDGTKVRRTVVVQDKPDVDEC---TIYVEKLPPEAEHDYIESVFSKY 220
ALR S L V+EDG KVRR + D D++E T+ E LP + +E F
Sbjct: 200 AAALRTSSQLVVSEDGKKVRRLHPLADT-DIEEVQSRTVVAENLPNDYSIQNLEKRFGAV 258
Query: 221 GKVTYVSL--PKFKSTGKL-------------KGFAFVEFSTKEEAAKAL 255
G V V + P+ +G++ K A VE+ T E+A KA+
Sbjct: 259 GNVKLVRVFQPQRYDSGQVSMKAHRNDMFVSSKLHALVEYETVEQAEKAV 308
Score = 44.7 bits (104), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN--KLARLTHDPDDVVKALRKSKLLE 58
+EFY SD+NL D++ + +++ PE V + N K+ L + V ALR S L
Sbjct: 151 VEFYFSDANLPTDKYLMKFVKKDPEGFVPIPFLANFRKVKNLVSNHSLVAAALRTSSQLV 210
Query: 59 VTEDGTKVK 67
V+EDG KV+
Sbjct: 211 VSEDGKKVR 219
>gi|729919|sp|P38656.1|LA_RAT RecName: Full=Lupus La protein homolog; AltName: Full=La
autoantigen homolog; AltName: Full=La ribonucleoprotein
gi|55779|emb|CAA48043.1| La/SS-B protein [Rattus norvegicus]
Length = 415
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 81/155 (52%), Gaps = 11/155 (7%)
Query: 109 LYQQIMNLMEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKAL 167
L +I + +E+Y D NL +D+F + ++ + + + +K N+L RLT D + +V+AL
Sbjct: 13 LEAKICHQIEYYFGDFNLPRDKFLKEQIKLDEGWVPLETMIKFNRLNRLTTDFNVIVQAL 72
Query: 168 RKSK--LLEVTEDGTKVRRT-------VVVQDKPDVDECTIYVEKLPPEAEHDYIESVFS 218
KSK L+EV+ D TK+RR+ V + K DV ++Y++ P +A D I+
Sbjct: 73 SKSKANLMEVSADKTKIRRSPSRPLPEVTDEYKNDVKNRSVYIKGFPTDATLDDIKEWLD 132
Query: 219 KYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAK 253
G++ + + + KG F F + + A K
Sbjct: 133 DKGQILNIQMRRTLHK-TFKGSIFAVFDSIQSAKK 166
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 45/70 (64%), Gaps = 3/70 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--LL 57
+E+Y D NL +D+F + ++ + + + +K N+L RLT D + +V+AL KSK L+
Sbjct: 21 IEYYFGDFNLPRDKFLKEQIKLDEGWVPLETMIKFNRLNRLTTDFNVIVQALSKSKANLM 80
Query: 58 EVTEDGTKVK 67
EV+ D TK++
Sbjct: 81 EVSADKTKIR 90
>gi|195436884|ref|XP_002066385.1| GK18125 [Drosophila willistoni]
gi|194162470|gb|EDW77371.1| GK18125 [Drosophila willistoni]
Length = 404
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 84/161 (52%), Gaps = 17/161 (10%)
Query: 113 IMNLMEFYLSDSNLRKDRFFSQLLQESPEIE----VSVFLKCNKLARLTHDPDDVVKALR 168
I+ +E+Y D+NL +D+F + +++S E +SV + +LA LT D +++ AL
Sbjct: 65 IIRQVEYYFGDANLNRDKFLREQIEKSEGGEGWVPLSVLITFKRLAALTTDFQEIIDALN 124
Query: 169 KSK--LLEVTEDGTKVRRTVVV-------QDKPDVDECTIYVEKLPPEAEHDYIESVFSK 219
KS LL+V+ED K+RR + + ++ E T Y + P +++ + S
Sbjct: 125 KSSEGLLQVSEDKEKLRRHPERPIPEHNEERRKEIQERTAYAKGFPLDSKMSDLLDFVSP 184
Query: 220 YGKVTYVSLPKF----KSTGKLKGFAFVEFSTKEEAAKALE 256
Y KV +++ K + K KG F+ F TKE+A K LE
Sbjct: 185 YEKVVNLTMRKHYDKPTKSYKFKGSIFLTFQTKEQAKKFLE 225
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 50/89 (56%), Gaps = 10/89 (11%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIE----VSVFLKCNKLARLTHDPDDVVKALRKSK- 55
+E+Y D+NL +D+F + +++S E +SV + +LA LT D +++ AL KS
Sbjct: 69 VEYYFGDANLNRDKFLREQIEKSEGGEGWVPLSVLITFKRLAALTTDFQEIIDALNKSSE 128
Query: 56 -LLEVTEDGTKVKGNIIRHFLVPISMETE 83
LL+V+ED K++ RH PI E
Sbjct: 129 GLLQVSEDKEKLR----RHPERPIPEHNE 153
>gi|12857271|dbj|BAB30957.1| unnamed protein product [Mus musculus]
Length = 381
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 72/130 (55%), Gaps = 10/130 (7%)
Query: 109 LYQQIMNLMEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKAL 167
L +I + +E+Y D NL +D+F + ++ + + + +K N+L RLT D + +V+AL
Sbjct: 13 LEAKICHQIEYYFGDFNLPRDKFLKEQIKLDEGWVPLETMIKFNRLNRLTTDFNVIVQAL 72
Query: 168 RKS--KLLEVTEDGTKVRRT-------VVVQDKPDVDECTIYVEKLPPEAEHDYIESVFS 218
KS KL+EV+ D TK+RR+ V + K DV ++Y++ P +A D I+
Sbjct: 73 SKSKAKLMEVSADKTKIRRSPSRPLPEVTDEYKNDVKNRSVYIKGFPTDATLDDIKEWLD 132
Query: 219 KYGKVTYVSL 228
G++ + +
Sbjct: 133 DKGQILNIQM 142
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 45/70 (64%), Gaps = 3/70 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKALRKS--KLL 57
+E+Y D NL +D+F + ++ + + + +K N+L RLT D + +V+AL KS KL+
Sbjct: 21 IEYYFGDFNLPRDKFLKEQIKLDEGWVPLETMIKFNRLNRLTTDFNVIVQALSKSKAKLM 80
Query: 58 EVTEDGTKVK 67
EV+ D TK++
Sbjct: 81 EVSADKTKIR 90
>gi|390595706|gb|EIN05110.1| hypothetical protein PUNSTDRAFT_55034 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 457
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 73/151 (48%), Gaps = 7/151 (4%)
Query: 117 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTH-DPDDVVKALRK-SKL 172
+EFY +DSNL DRF L +PE + +S ++ T + V ALRK S
Sbjct: 8 IEFYFADSNLPYDRFMWSLHTANPEHWVPISTVASFKRMRDYTPLGVEWVANALRKKSDQ 67
Query: 173 LEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAE--HDYIESVFSKYGKVTYVSLPK 230
LEV+EDGT VRR VQ+ E +IY + E +E F KYG+ V + +
Sbjct: 68 LEVSEDGTNVRRKNEVQEPKGQMERSIYAKGFGTETPDLQTKLEEYFEKYGRTNAVRM-R 126
Query: 231 FKSTGKLKGFAFVEFSTKEEAAKALELGLNP 261
+ + KG FVEFS + ++ L P
Sbjct: 127 RSNEKEFKGSVFVEFSDFDSVSRFLNADPKP 157
Score = 41.6 bits (96), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTH-DPDDVVKALR-KSKL 56
+EFY +DSNL DRF L +PE + +S ++ T + V ALR KS
Sbjct: 8 IEFYFADSNLPYDRFMWSLHTANPEHWVPISTVASFKRMRDYTPLGVEWVANALRKKSDQ 67
Query: 57 LEVTEDGTKVK 67
LEV+EDGT V+
Sbjct: 68 LEVSEDGTNVR 78
>gi|108862355|gb|ABA96798.2| transposon protein, putative, Mutator sub-class, expressed [Oryza
sativa Japonica Group]
Length = 310
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 78/168 (46%), Gaps = 20/168 (11%)
Query: 108 QLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVK 165
++ +I +E+Y SD NL + + + PE + ++V NK+ L H+ +
Sbjct: 118 EVVHKITKQVEYYFSDINLATTEHLMRFITKDPEGYVPITVIAGFNKIKALVHNNSMLAA 177
Query: 166 ALRKSKLLEVTEDGTKVRR--TVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKV 223
ALR S L V++DG +V+R + V D D+ + E LP + + + +FS G V
Sbjct: 178 ALRTSSKLVVSDDGKRVKRLQSFTVSDMQDLQSRIVVAENLPGDPCYQNLMKIFSTVGSV 237
Query: 224 TYV----------SLPKFKSTGKL------KGFAFVEFSTKEEAAKAL 255
+ + P + KL K AFVE+ T E+A KA+
Sbjct: 238 KTIRTCYPQSSNGNSPATNRSAKLDMLFANKLHAFVEYETLEDAEKAI 285
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
+E+Y SD NL + + + PE + ++V NK+ L H+ + ALR S L
Sbjct: 127 VEYYFSDINLATTEHLMRFITKDPEGYVPITVIAGFNKIKALVHNNSMLAAALRTSSKLV 186
Query: 59 VTEDGTKVK 67
V++DG +VK
Sbjct: 187 VSDDGKRVK 195
>gi|66911409|gb|AAH97252.1| Ssb protein [Rattus norvegicus]
Length = 152
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 74/140 (52%), Gaps = 10/140 (7%)
Query: 99 DGGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFF-SQLLQESPEIEVSVFLKCNKLARLT 157
+ G + L +I + +E+Y D NL +D+F Q+ + + + +K N+L RLT
Sbjct: 3 ENGDNEKMAALEAKICHQIEYYFGDFNLPRDKFLKEQIKLDEGWVPLETMIKFNRLNRLT 62
Query: 158 HDPDDVVKALRKSK--LLEVTEDGTKVRRT-------VVVQDKPDVDECTIYVEKLPPEA 208
D + +V+AL KSK L+EV+ D TK+RR+ V + K DV ++Y++ P +A
Sbjct: 63 TDFNVIVQALSKSKANLMEVSADKTKIRRSPSRPLPEVTDEYKNDVKNRSVYIKGFPTDA 122
Query: 209 EHDYIESVFSKYGKVTYVSL 228
D I+ G++ + +
Sbjct: 123 TLDDIKEWLDDKGQILNIQM 142
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 44/70 (62%), Gaps = 3/70 (4%)
Query: 1 MEFYLSDSNLRKDRFF-SQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--LL 57
+E+Y D NL +D+F Q+ + + + +K N+L RLT D + +V+AL KSK L+
Sbjct: 21 IEYYFGDFNLPRDKFLKEQIKLDEGWVPLETMIKFNRLNRLTTDFNVIVQALSKSKANLM 80
Query: 58 EVTEDGTKVK 67
EV+ D TK++
Sbjct: 81 EVSADKTKIR 90
>gi|196001985|ref|XP_002110860.1| hypothetical protein TRIADDRAFT_54211 [Trichoplax adhaerens]
gi|190586811|gb|EDV26864.1| hypothetical protein TRIADDRAFT_54211 [Trichoplax adhaerens]
Length = 351
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 72/125 (57%), Gaps = 13/125 (10%)
Query: 138 ESPEIEVSVFLKCNKLARLTHDPDDVVKALRKS--KLLEVTEDGTKVRRT------VVVQ 189
E E+E+ + ++ L+ D D ++ AL+KS ++E++EDG ++R+ +V +
Sbjct: 5 EPSELELKII---KQIESLSTDTDVIMAALKKSTNNVVEISEDGQSLQRSAANPIEIVTE 61
Query: 190 DKP-DVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTK 248
DK D+ T+YV+ PPE + IE+ + +G+V Y+ + ++K KG FVEF +
Sbjct: 62 DKRVDMKSRTVYVKGFPPETSLEQIENFITTFGQVNYIRMRRYKDRN-FKGSIFVEFCKQ 120
Query: 249 EEAAK 253
E+A K
Sbjct: 121 EDAVK 125
>gi|170097433|ref|XP_001879936.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164645339|gb|EDR09587.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 494
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 60/117 (51%), Gaps = 5/117 (4%)
Query: 117 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDD-VVKALRKSKLL 173
+EFY +DSNL D+F L + P+ + V ++ + + ++ + ALR S L
Sbjct: 47 IEFYFADSNLPYDKFMWTLYTKDPDHWVPVHTVASFKRMREFSANGEEWIANALRLSDFL 106
Query: 174 EVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAE--HDYIESVFSKYGKVTYVSL 228
EV E GTKVRR VQ+ D E ++Y + P E IE F++YG T V +
Sbjct: 107 EVDETGTKVRRRTEVQEPKDSFERSVYAKGFPDEDNTLQKRIEEFFNQYGTTTAVRM 163
Score = 40.8 bits (94), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDD-VVKALRKSKLL 57
+EFY +DSNL D+F L + P+ + V ++ + + ++ + ALR S L
Sbjct: 47 IEFYFADSNLPYDKFMWTLYTKDPDHWVPVHTVASFKRMREFSANGEEWIANALRLSDFL 106
Query: 58 EVTEDGTKVK 67
EV E GTKV+
Sbjct: 107 EVDETGTKVR 116
>gi|302767112|ref|XP_002966976.1| hypothetical protein SELMODRAFT_168828 [Selaginella moellendorffii]
gi|300164967|gb|EFJ31575.1| hypothetical protein SELMODRAFT_168828 [Selaginella moellendorffii]
Length = 439
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 85/190 (44%), Gaps = 41/190 (21%)
Query: 112 QIMNLMEFYLSDSNLRKDRFFSQLLQESPE-------------------------IEVSV 146
+I +EFY SDSNL D F + ++ES + + +SV
Sbjct: 13 KITRQVEFYFSDSNLANDAFLLRSIEESADGCTFFFRAFHSNRFFHSKHPFLVTVVSLSV 72
Query: 147 FLKCNKLA---RLTHD-----PDDVVKA----LRKSKLLEVTEDGTKVRRTVVVQD---- 190
++ RL+ P VV A LRKS L+V++DG +V R +Q
Sbjct: 73 ICAFTRMRFHLRLSQTTPETIPKGVVAAVADVLRKSSFLKVSDDGLRVGRVHEMQKPEEV 132
Query: 191 KPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEE 250
+ +VD ++ V + + IE+ F K+ V +P+ + G+A VEF++ EE
Sbjct: 133 RAEVDARSLAVSPFSWKTTREEIEAFFESNCKILSVRVPRHPAVKAFSGYAIVEFASPEE 192
Query: 251 AAKALELGLN 260
A +A +GLN
Sbjct: 193 AQRASGMGLN 202
>gi|148535007|gb|ABQ85431.1| Sjogren syndrome antigen B [Cricetulus griseus]
Length = 310
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 78/147 (53%), Gaps = 11/147 (7%)
Query: 117 MEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKALRKS--KLL 173
+E+Y D NL +D+F + ++ + + + + +K N+L RLT D + +V+AL KS KL+
Sbjct: 1 IEYYFGDFNLPRDKFLKEQIKLDEGWVPLDIMIKFNRLNRLTTDFNVIVQALSKSKAKLM 60
Query: 174 EVTEDGTKVRRT-------VVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYV 226
EV+ D TK+RR+ V + K DV ++Y++ P +A D I+ G++ +
Sbjct: 61 EVSADKTKIRRSPSRPLPEVTDEYKNDVKNRSVYIKGFPTDATLDDIKEWLDDKGQILNI 120
Query: 227 SLPKFKSTGKLKGFAFVEFSTKEEAAK 253
+ + KG F F + + A K
Sbjct: 121 QMRRTLHKT-FKGSIFAVFDSIQSAKK 146
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 46/70 (65%), Gaps = 3/70 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKALRKS--KLL 57
+E+Y D NL +D+F + ++ + + + + +K N+L RLT D + +V+AL KS KL+
Sbjct: 1 IEYYFGDFNLPRDKFLKEQIKLDEGWVPLDIMIKFNRLNRLTTDFNVIVQALSKSKAKLM 60
Query: 58 EVTEDGTKVK 67
EV+ D TK++
Sbjct: 61 EVSADKTKIR 70
>gi|168027828|ref|XP_001766431.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682340|gb|EDQ68759.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 507
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 67/129 (51%), Gaps = 10/129 (7%)
Query: 107 KQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVV 164
++L +I+ +E+Y SD+NL D + + +++ E + + V K+ L + V
Sbjct: 146 EELKDKILKQVEYYFSDANLSTDTYLMKFVKKDAEGFVPIPVVASFRKIKNLMKNHGVVA 205
Query: 165 KALRKSKLLEVTEDGTKVRRTVVVQDKPDVDE-----CTIYVEKLPPEAEHDYIESVFSK 219
ALRKS L ++EDG KVRR + + PDVD T+ E LP E + +E +F K
Sbjct: 206 AALRKSTRLVLSEDGKKVRRALPL---PDVDSEEVQARTVVAENLPEEHSIESMEQLFGK 262
Query: 220 YGKVTYVSL 228
G V V +
Sbjct: 263 VGTVKLVRI 271
Score = 41.2 bits (95), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
+E+Y SD+NL D + + +++ E + + V K+ L + V ALRKS L
Sbjct: 156 VEYYFSDANLSTDTYLMKFVKKDAEGFVPIPVVASFRKIKNLMKNHGVVAAALRKSTRLV 215
Query: 59 VTEDGTKVK 67
++EDG KV+
Sbjct: 216 LSEDGKKVR 224
>gi|125536141|gb|EAY82629.1| hypothetical protein OsI_37849 [Oryza sativa Indica Group]
Length = 478
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 78/168 (46%), Gaps = 20/168 (11%)
Query: 108 QLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVK 165
++ +I +E+Y SD NL + + + PE + ++V NK+ L H+ +
Sbjct: 118 EVVHKITKQVEYYFSDINLATTEHLMRFITKDPEGYVPITVIAGFNKIKALVHNNSMLAA 177
Query: 166 ALRKSKLLEVTEDGTKVRR--TVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKV 223
ALR S L V++DG +V+R + V D D+ + E LP + + + +FS G V
Sbjct: 178 ALRTSSKLVVSDDGKRVKRLQSFTVSDMQDLQSRIVVAENLPGDPCYQNLMKIFSTVGSV 237
Query: 224 TYV----------SLPKFKSTGKL------KGFAFVEFSTKEEAAKAL 255
+ + P + KL K AFVE+ T E+A KA+
Sbjct: 238 KTIRTCYPQSSNGNSPATNRSAKLDMLFANKLHAFVEYETLEDAEKAI 285
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
+E+Y SD NL + + + PE + ++V NK+ L H+ + ALR S L
Sbjct: 127 VEYYFSDINLATTEHLMRFITKDPEGYVPITVIAGFNKIKALVHNNSMLAAALRTSSKLV 186
Query: 59 VTEDGTKVK 67
V++DG +VK
Sbjct: 187 VSDDGKRVK 195
>gi|356515577|ref|XP_003526475.1| PREDICTED: lupus La protein homolog A-like [Glycine max]
Length = 460
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 80/164 (48%), Gaps = 20/164 (12%)
Query: 111 QQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKC--NKLAR-----------LT 157
++++ +EFY DSNL D F + ES + +S+ L C N++ + +
Sbjct: 12 KKVIRQVEFYFGDSNLLTDGFMRNSITESEDGMISLALICSFNRMRKHLNLGDVKPEEVA 71
Query: 158 HDP-DDVVKALRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDY---- 212
D + V + LR S L+V+EDG KV R + +V++ I + P EHD
Sbjct: 72 QDTVNAVAQTLRNSATLKVSEDGKKVGRKTELPKLEEVEQVEIRTLAVSP-FEHDLKLED 130
Query: 213 IESVFSKYGKVTYVSLPKFKSTGK-LKGFAFVEFSTKEEAAKAL 255
+E +F +Y KV V LP K G A VEFS++E+ K +
Sbjct: 131 VEKLFGQYAKVNSVRLPHHVGDKKFFCGTALVEFSSEEDVEKVM 174
Score = 38.1 bits (87), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 14/80 (17%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKC--NKLAR-----------LTHDP-DD 46
+EFY DSNL D F + ES + +S+ L C N++ + + D +
Sbjct: 18 VEFYFGDSNLLTDGFMRNSITESEDGMISLALICSFNRMRKHLNLGDVKPEEVAQDTVNA 77
Query: 47 VVKALRKSKLLEVTEDGTKV 66
V + LR S L+V+EDG KV
Sbjct: 78 VAQTLRNSATLKVSEDGKKV 97
>gi|225428701|ref|XP_002281817.1| PREDICTED: uncharacterized protein LOC100241743 [Vitis vinifera]
gi|297741333|emb|CBI32464.3| unnamed protein product [Vitis vinifera]
Length = 412
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 81/163 (49%), Gaps = 14/163 (8%)
Query: 109 LYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKA 166
+ Q+I+ +E+ +D +L ++ + + PE + +SV K+ L + + +A
Sbjct: 104 IQQKIIKQVEYQFNDMSLLASDSLAKHINKDPEGYVPISVIASSKKVKALVSNNQLLAQA 163
Query: 167 LRKSKLLEVTEDGTKVRRTVVV--QDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVT 224
LR S L V+ DG KVRR + +DK ++ T+ E LP + H ++ +FS G V
Sbjct: 164 LRSSSQLVVSSDGKKVRRKHLFTERDKEELQAHTVVAENLPEDHSHQNLQKIFSVVGSVK 223
Query: 225 YVSL--PKFKSTGKLKG--------FAFVEFSTKEEAAKALEL 257
+ + P+ + + KG A VE+ + E A KA+E+
Sbjct: 224 NIRICHPQESNNSRSKGDFFISNKLHALVEYESVEIAEKAVEM 266
>gi|125578867|gb|EAZ20013.1| hypothetical protein OsJ_35608 [Oryza sativa Japonica Group]
Length = 481
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 78/168 (46%), Gaps = 20/168 (11%)
Query: 108 QLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVK 165
++ +I +E+Y SD NL + + + PE + ++V NK+ L H+ +
Sbjct: 121 EVVHKITKQVEYYFSDINLATTEHLMRFITKDPEGYVPITVIAGFNKIKALVHNNSMLAA 180
Query: 166 ALRKSKLLEVTEDGTKVRR--TVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKV 223
ALR S L V++DG +V+R + V D D+ + E LP + + + +FS G V
Sbjct: 181 ALRTSSKLVVSDDGKRVKRLQSFTVSDMQDLQSRIVVAENLPGDPCYQNLMKIFSTVGSV 240
Query: 224 TYV----------SLPKFKSTGKL------KGFAFVEFSTKEEAAKAL 255
+ + P + KL K AFVE+ T E+A KA+
Sbjct: 241 KTIRTCYPQSSNGNSPATNRSAKLDMLFANKLHAFVEYETLEDAEKAI 288
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
+E+Y SD NL + + + PE + ++V NK+ L H+ + ALR S L
Sbjct: 130 VEYYFSDINLATTEHLMRFITKDPEGYVPITVIAGFNKIKALVHNNSMLAAALRTSSKLV 189
Query: 59 VTEDGTKVK 67
V++DG +VK
Sbjct: 190 VSDDGKRVK 198
>gi|242223172|ref|XP_002477250.1| predicted protein [Postia placenta Mad-698-R]
gi|220723327|gb|EED77551.1| predicted protein [Postia placenta Mad-698-R]
Length = 207
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 74/145 (51%), Gaps = 11/145 (7%)
Query: 101 GGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE-----IEVSVFLKCNKLAR 155
GG ++K L M +EFY +DSNL D+F L + E +VS F + +
Sbjct: 62 GGDDKEKML--DAMRQIEFYFADSNLPFDKFMWTLHTANAEHWVPIKQVSSFKRMREYQP 119
Query: 156 LTHDPDDVVKALRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAE--HDYI 213
L + + ALR S+ LEV+EDGT+VRR VQ+ E ++Y + E E +
Sbjct: 120 LGLEW--ITNALRLSEELEVSEDGTQVRRRTEVQEPKGQFERSVYAKGFGAETEGIQKRL 177
Query: 214 ESVFSKYGKVTYVSLPKFKSTGKLK 238
E+ F++YGK V + + +T + K
Sbjct: 178 EAFFNQYGKTNAVRMRRIDTTKEFK 202
>gi|108862353|gb|ABA96797.2| transposon protein, putative, Mutator sub-class, expressed [Oryza
sativa Japonica Group]
Length = 478
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 78/168 (46%), Gaps = 20/168 (11%)
Query: 108 QLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVK 165
++ +I +E+Y SD NL + + + PE + ++V NK+ L H+ +
Sbjct: 118 EVVHKITKQVEYYFSDINLATTEHLMRFITKDPEGYVPITVIAGFNKIKALVHNNSMLAA 177
Query: 166 ALRKSKLLEVTEDGTKVRR--TVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKV 223
ALR S L V++DG +V+R + V D D+ + E LP + + + +FS G V
Sbjct: 178 ALRTSSKLVVSDDGKRVKRLQSFTVSDMQDLQSRIVVAENLPGDPCYQNLMKIFSTVGSV 237
Query: 224 TYV----------SLPKFKSTGKL------KGFAFVEFSTKEEAAKAL 255
+ + P + KL K AFVE+ T E+A KA+
Sbjct: 238 KTIRTCYPQSSNGNSPATNRSAKLDMLFANKLHAFVEYETLEDAEKAI 285
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
+E+Y SD NL + + + PE + ++V NK+ L H+ + ALR S L
Sbjct: 127 VEYYFSDINLATTEHLMRFITKDPEGYVPITVIAGFNKIKALVHNNSMLAAALRTSSKLV 186
Query: 59 VTEDGTKVK 67
V++DG +VK
Sbjct: 187 VSDDGKRVK 195
>gi|409042940|gb|EKM52423.1| hypothetical protein PHACADRAFT_260796 [Phanerochaete carnosa
HHB-10118-sp]
Length = 503
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 68/136 (50%), Gaps = 9/136 (6%)
Query: 117 MEFYLSDSNLRKDRFFSQLLQESPE-----IEVSVFLKCNKLARLTHDPDDVVKALRKSK 171
+EFY +D+NL D+F L +PE V+ F + + L D +V AL+ S
Sbjct: 73 IEFYFADANLPYDKFMWTLHTANPEHWVPIATVASFKRMREFVPLGTDW--LVNALKSST 130
Query: 172 LLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAE--HDYIESVFSKYGKVTYVSLP 229
LEV E TKVRR V + E +IY + E +E+ F++YG+ V +
Sbjct: 131 ALEVDETNTKVRRRTEVTEPKGQFERSIYAKGFGEEVPGLQQKLEAFFNQYGRTNAVRMR 190
Query: 230 KFKSTGKLKGFAFVEF 245
+ ++T + KG FVEF
Sbjct: 191 REENTKRFKGSIFVEF 206
>gi|313226623|emb|CBY21768.1| unnamed protein product [Oikopleura dioica]
Length = 412
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 84/169 (49%), Gaps = 17/169 (10%)
Query: 103 RHRKKQLY-QQIMNLMEFYLSDSNLRKDRFFSQLLQESPE-IEVSVFLKCNKLARLTHDP 160
R K L+ Q+++ ++E Y SD L++++F ++ +Q +PE I + ++ LT D
Sbjct: 225 RSGSKTLFLQKMVEVLESYFSDEGLKRNQFLAKQIQLNPEGIPLKKVAAMRRVKALTRDF 284
Query: 161 DDVVKALRKSKLLEVTEDGTKVRRTVVVQD-KPDVDECTIYVEKLPPEAEHDYIESVFSK 219
V A+RKS +LE++ DG V+RTV +P T+ L + + S F+K
Sbjct: 285 MTVASAIRKSPMLELSRDGQLVKRTVQPATLEPPKPIRTVLAINLHENPTVESVTSSFAK 344
Query: 220 YGKVTYVSL--PKFKSTGKLKGF------------AFVEFSTKEEAAKA 254
YG +T V + P + LK F A +EF T++EA A
Sbjct: 345 YGDLTQVRVIRPTSQLPAYLKEFTMWVPDIGTTNCAVIEFETQDEAQAA 393
Score = 44.7 bits (104), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE-IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEV 59
+E Y SD L++++F ++ +Q +PE I + ++ LT D V A+RKS +LE+
Sbjct: 240 LESYFSDEGLKRNQFLAKQIQLNPEGIPLKKVAAMRRVKALTRDFMTVASAIRKSPMLEL 299
Query: 60 TEDGTKVKGNIIRHFLVP 77
+ DG VK + L P
Sbjct: 300 SRDGQLVKRTVQPATLEP 317
>gi|356549093|ref|XP_003542932.1| PREDICTED: uncharacterized protein LOC100788145 [Glycine max]
Length = 400
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 79/163 (48%), Gaps = 17/163 (10%)
Query: 112 QIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRK 169
+I+ E+Y SD NL D++ ++ + E + VSV K+ +LT D +V AL++
Sbjct: 102 KIIKQAEYYFSDENLPTDKYLLGFVKRNKEGFVPVSVIASFRKIKKLTRDHAFIVAALKE 161
Query: 170 SKLLEVTEDGTKVRR--TVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVS 227
S LL V+ DG +V+R + + D T+ VE LP + I+ +F + G + ++
Sbjct: 162 SSLLVVSGDGRRVKRLNPLRFNESRDHKLYTVLVENLPEDHSKKNIQQIFHEAGNIKRIT 221
Query: 228 LPKFKSTGKL-------------KGFAFVEFSTKEEAAKALEL 257
+ ST + K A VE+ T E A KA+ +
Sbjct: 222 IHDPHSTSESAKQHNKQEMLISNKLHALVEYETMEAAEKAVAM 264
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 2 EFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEV 59
E+Y SD NL D++ ++ + E + VSV K+ +LT D +V AL++S LL V
Sbjct: 108 EYYFSDENLPTDKYLLGFVKRNKEGFVPVSVIASFRKIKKLTRDHAFIVAALKESSLLVV 167
Query: 60 TEDGTKVK 67
+ DG +VK
Sbjct: 168 SGDGRRVK 175
>gi|313246344|emb|CBY35262.1| unnamed protein product [Oikopleura dioica]
Length = 491
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 86/166 (51%), Gaps = 19/166 (11%)
Query: 108 QLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN--KLARLTHDPDDVVK 165
+L ++I +E+Y S+ L +D +F + ++ E +S+ L N K+ +L+ DP
Sbjct: 115 ELQRKIAQQVEYYFSNEYLTRDAYFLRQIRRKREGYLSMKLITNFKKVRKLSKDPRITSF 174
Query: 166 ALRKSKLLEVTEDGTKVRRTVVVQDKPDVDECT--IYVEKLPPE-AEHDYIESVFSKYGK 222
LRKSKLL+V E+G+KVRR + + + T + V K+P A D + ++F K+G+
Sbjct: 175 CLRKSKLLQVNEEGSKVRRVQPIPEDLRLHTLTRSVLVSKIPSNLATIDSLMNIFFKFGE 234
Query: 223 VTYVSLPK-------------FKSTGKLKGF-AFVEFSTKEEAAKA 254
++ V + + KS + G A VEF T E AA A
Sbjct: 235 ISSVRILRPGKEIPHDLREFFGKSIEHVSGISAVVEFETPEGAAAA 280
Score = 44.3 bits (103), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN--KLARLTHDPDDVVKALRKSKLLE 58
+E+Y S+ L +D +F + ++ E +S+ L N K+ +L+ DP LRKSKLL+
Sbjct: 124 VEYYFSNEYLTRDAYFLRQIRRKREGYLSMKLITNFKKVRKLSKDPRITSFCLRKSKLLQ 183
Query: 59 VTEDGTKVK 67
V E+G+KV+
Sbjct: 184 VNEEGSKVR 192
>gi|194760049|ref|XP_001962254.1| GF15376 [Drosophila ananassae]
gi|190615951|gb|EDV31475.1| GF15376 [Drosophila ananassae]
Length = 391
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 81/154 (52%), Gaps = 15/154 (9%)
Query: 113 IMNLMEFYLSDSNLRKDRFFSQLL--QESPEIEVSVFLKCNKLARLTHDPDDVVKALRKS 170
I+ +E+Y D+NL +D+F + + E + +SV + +LA L+ D +++V AL KS
Sbjct: 54 IIRQVEYYFGDANLNRDKFLREQIGKNEDGWVPLSVLITFKRLASLSTDFEEIVAALNKS 113
Query: 171 K--LLEVTEDGTKVRRTVVV-------QDKPDVDECTIYVEKLPPEAEHDYIESVFSKYG 221
+ L++++ED +RR + + ++ E T Y + P E++ + F+ Y
Sbjct: 114 EEGLIQISEDKQSLRRHPERPIPEHNEERRKEIQERTAYAKGFPLESQMTELLDFFASYD 173
Query: 222 KVTYVSLPKF----KSTGKLKGFAFVEFSTKEEA 251
KV +++ K + K KG F+ F TKE+A
Sbjct: 174 KVVNITMRKHYDKPTKSYKFKGSIFLTFETKEQA 207
Score = 43.9 bits (102), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 1 MEFYLSDSNLRKDRFFSQLL--QESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--L 56
+E+Y D+NL +D+F + + E + +SV + +LA L+ D +++V AL KS+ L
Sbjct: 58 VEYYFGDANLNRDKFLREQIGKNEDGWVPLSVLITFKRLASLSTDFEEIVAALNKSEEGL 117
Query: 57 LEVTEDGTKVKGNIIRHFLVPISMETE 83
++++ED K ++ RH PI E
Sbjct: 118 IQISED----KQSLRRHPERPIPEHNE 140
>gi|313218565|emb|CBY43076.1| unnamed protein product [Oikopleura dioica]
Length = 413
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 84/169 (49%), Gaps = 17/169 (10%)
Query: 103 RHRKKQLY-QQIMNLMEFYLSDSNLRKDRFFSQLLQESPE-IEVSVFLKCNKLARLTHDP 160
R K L+ Q+++ ++E Y SD L++++F ++ +Q +PE I + ++ LT D
Sbjct: 225 RSGSKTLFLQKMVEVLESYFSDEGLKRNQFLAKQIQLNPEGIPLKKVAAMRRVKALTRDF 284
Query: 161 DDVVKALRKSKLLEVTEDGTKVRRTVVVQD-KPDVDECTIYVEKLPPEAEHDYIESVFSK 219
V A+RKS +LE++ DG V+RTV +P T+ L + + S F+K
Sbjct: 285 MTVASAIRKSPMLELSRDGQLVKRTVQPATLEPPKPIRTVLAINLHENPTVESVTSSFAK 344
Query: 220 YGKVTYVSL--PKFKSTGKLKGF------------AFVEFSTKEEAAKA 254
YG +T V + P + LK F A +EF T++EA A
Sbjct: 345 YGDLTQVRVIRPTSQLPAYLKEFTMWVPDIGTTNCAVIEFETQDEAQAA 393
Score = 44.3 bits (103), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE-IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEV 59
+E Y SD L++++F ++ +Q +PE I + ++ LT D V A+RKS +LE+
Sbjct: 240 LESYFSDEGLKRNQFLAKQIQLNPEGIPLKKVAAMRRVKALTRDFMTVASAIRKSPMLEL 299
Query: 60 TEDGTKVKGNIIRHFLVP 77
+ DG VK + L P
Sbjct: 300 SRDGQLVKRTVQPATLEP 317
>gi|255070447|ref|XP_002507305.1| predicted protein [Micromonas sp. RCC299]
gi|226522580|gb|ACO68563.1| predicted protein [Micromonas sp. RCC299]
Length = 214
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 89/176 (50%), Gaps = 18/176 (10%)
Query: 112 QIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLT-----HDPDDVV 164
+++N +EFY SDSNL +D+F + ++ P+ +++++ + +++ L H D+V
Sbjct: 26 KLLNQIEFYFSDSNLPRDKFLRETVENDPDGFVDIALLVTFSRVRSLLGSYGRHCDGDLV 85
Query: 165 K----ALRKSKLLEVTEDGTKVRRTVVVQDKPDVD----ECTIYVEKLPPEAEHDYIESV 216
AL S LL V+ D +VRR +++ + +VD + ++YV P + D +
Sbjct: 86 AAVAGALDTSTLLTVSCDKQRVRRNSILRPRAEVDAEVEQRSLYVSPFPMDVTIDKLREF 145
Query: 217 FSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNPCPPDYQSSILT 272
FS + +V + L + + KG F+E + A L+ N +Y+ + LT
Sbjct: 146 FSHHVEVLSIRLRRHALSKDFKGSIFIELESSTSCAVLLQ---NSHALEYEGANLT 198
>gi|313232810|emb|CBY09493.1| unnamed protein product [Oikopleura dioica]
Length = 491
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 86/166 (51%), Gaps = 19/166 (11%)
Query: 108 QLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN--KLARLTHDPDDVVK 165
+L ++I +E+Y S+ L +D +F + ++ E +S+ L N K+ +L+ DP
Sbjct: 115 ELQRKIAQQVEYYFSNEYLTRDAYFLRQIRRKREGYLSMKLITNFKKVRKLSKDPRITSF 174
Query: 166 ALRKSKLLEVTEDGTKVRRTVVVQDKPDVDECT--IYVEKLPPE-AEHDYIESVFSKYGK 222
LRKSKLL+V E+G+KVRR + + + T + V K+P A D + ++F K+G+
Sbjct: 175 CLRKSKLLQVNEEGSKVRRVQPIPEDLRLHTLTRSLLVSKIPSNLATIDSLMNIFFKFGE 234
Query: 223 VTYVSLPK-------------FKSTGKLKGF-AFVEFSTKEEAAKA 254
++ V + + KS + G A VEF T E AA A
Sbjct: 235 ISSVRILRPGKEIPHDLREFFGKSIEHVSGISAVVEFETPEGAAAA 280
Score = 44.3 bits (103), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN--KLARLTHDPDDVVKALRKSKLLE 58
+E+Y S+ L +D +F + ++ E +S+ L N K+ +L+ DP LRKSKLL+
Sbjct: 124 VEYYFSNEYLTRDAYFLRQIRRKREGYLSMKLITNFKKVRKLSKDPRITSFCLRKSKLLQ 183
Query: 59 VTEDGTKVK 67
V E+G+KV+
Sbjct: 184 VNEEGSKVR 192
>gi|313239998|emb|CBY32358.1| unnamed protein product [Oikopleura dioica]
Length = 528
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 84/169 (49%), Gaps = 17/169 (10%)
Query: 103 RHRKKQLY-QQIMNLMEFYLSDSNLRKDRFFSQLLQESPE-IEVSVFLKCNKLARLTHDP 160
R K L+ Q+++ ++E Y SD L++++F ++ +Q +PE I + ++ LT D
Sbjct: 225 RSGSKTLFLQKMVEVLESYFSDEGLKRNQFLAKQIQLNPEGIPLKKVAAMRRVKALTRDF 284
Query: 161 DDVVKALRKSKLLEVTEDGTKVRRTVVVQD-KPDVDECTIYVEKLPPEAEHDYIESVFSK 219
V A+RKS +LE++ DG V+RTV +P T+ L + + S F+K
Sbjct: 285 MTVASAIRKSPMLELSRDGQLVKRTVQPATLEPPKPIRTVLAINLHENPTVESVTSSFAK 344
Query: 220 YGKVTYVSL--PKFKSTGKLKGF------------AFVEFSTKEEAAKA 254
YG +T V + P + LK F A +EF T++EA A
Sbjct: 345 YGDLTQVRVIRPTSQLPAYLKEFTMWVPDIGTTNCAVIEFETQDEAQAA 393
Score = 44.3 bits (103), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE-IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEV 59
+E Y SD L++++F ++ +Q +PE I + ++ LT D V A+RKS +LE+
Sbjct: 240 LESYFSDEGLKRNQFLAKQIQLNPEGIPLKKVAAMRRVKALTRDFMTVASAIRKSPMLEL 299
Query: 60 TEDGTKVKGNIIRHFLVP 77
+ DG VK + L P
Sbjct: 300 SRDGQLVKRTVQPATLEP 317
>gi|326522086|dbj|BAK04171.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 453
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 83/171 (48%), Gaps = 15/171 (8%)
Query: 101 GGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTH 158
GG + Q+I+ +E+ SD NL + F +++ + E + +SV K+ L
Sbjct: 111 GGGGGSADVAQKIVKQVEYQFSDINLVANEFLLKIMNKDSEGYVPLSVISSWKKIKSLGA 170
Query: 159 DPDDVVKALRKSKLLEVTEDGTKVRR--TVVVQDKPDVDECTIYVEKLPPEAEHDYIESV 216
+VKALR S L V++DG KVRR + K ++ I E LP ++ + +E V
Sbjct: 171 TNQMLVKALRTSTKLIVSDDGKKVRRRQPFTEKHKEELQSRMIIAENLPEDSSRNSLEKV 230
Query: 217 FSKYGKVTYVSL--PKFKSTGKL---------KGFAFVEFSTKEEAAKALE 256
FS G V + + P+ S+ + K A VE+ T ++A KA+E
Sbjct: 231 FSVVGSVKNIKICHPQEPSSARASKSDTLVSNKMHALVEYETSQQAEKAVE 281
>gi|449543973|gb|EMD34947.1| hypothetical protein CERSUDRAFT_139701 [Ceriporiopsis subvermispora
B]
Length = 490
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 82/169 (48%), Gaps = 12/169 (7%)
Query: 118 EFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARL----THDPDDVVKALRKSKLL 173
EFY +D+NL DRF L +PE V + + R+ + D V KALR S+ L
Sbjct: 46 EFYFADANLPYDRFMWTLHTANPEHWVPIKTVAS-FKRMRDFQSFGVDWVAKALRLSEEL 104
Query: 174 EVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAE--HDYIESVFSKYGKVTYVSLPKF 231
E+ E VRR V++ E ++Y + E + +E F KYGK V + +
Sbjct: 105 ELDEKAENVRRRTEVKEPKGQFERSVYAKGFGSEEPGLQERLEEFFDKYGKTNAVRMRRV 164
Query: 232 KSTGKLKGFAFVEFSTKEEAAKALELGLNPCP-PDYQSSILTTTSRLSF 279
++T + KG FVEF+ + K+++ LN P P + L ++ ++
Sbjct: 165 ETTKEFKGSVFVEFADE----KSVDAFLNADPKPTWNGQELLIMTKEAY 209
>gi|291190329|ref|NP_001167237.1| Lupus La protein homolog B [Salmo salar]
gi|223648816|gb|ACN11166.1| Lupus La protein homolog B [Salmo salar]
Length = 401
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 85/160 (53%), Gaps = 15/160 (9%)
Query: 108 QLYQQIMNLMEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKA 166
+L +++ +E+Y D NL +D+F + LQ + + + LK N+L LT D +V++
Sbjct: 9 ELEKKVAQQIEYYFGDHNLPRDKFLKEQLQLDDGWVTLETMLKFNRLKCLTTDHSVIVES 68
Query: 167 LRKSK--LLEVTEDGTKVRRTVVVQDKPDVDE--------CTIYVEKLPPEAEHDYIESV 216
L+KS+ LLE++ED TK+RR + + P++++ ++Y++ P E D IE
Sbjct: 69 LKKSQTGLLELSEDKTKIRR-ISSKPLPELNDKYKDTLKHKSVYIKGFPLETTLDEIEGW 127
Query: 217 FSKYGKVTYVSLPK-FKSTGKLKGFAFVEFSTKEEAAKAL 255
G + + + + F+ KG F+ F T E + + L
Sbjct: 128 LKGKGAIENIQMRRNFQKN--FKGSVFLVFDTDEASKQFL 165
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 45/70 (64%), Gaps = 3/70 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--LL 57
+E+Y D NL +D+F + LQ + + + LK N+L LT D +V++L+KS+ LL
Sbjct: 18 IEYYFGDHNLPRDKFLKEQLQLDDGWVTLETMLKFNRLKCLTTDHSVIVESLKKSQTGLL 77
Query: 58 EVTEDGTKVK 67
E++ED TK++
Sbjct: 78 ELSEDKTKIR 87
>gi|378734716|gb|EHY61175.1| lupus La protein [Exophiala dermatitidis NIH/UT8656]
Length = 570
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 87/172 (50%), Gaps = 30/172 (17%)
Query: 113 IMNLMEFYLSDSNLRKDRFFSQLL---QESPEIEVSVFLKCNKLARLTH-DP-DDVVKAL 167
I +EFY SDSNL D+F + Q +P +E+S+ + R+ H P + +V+AL
Sbjct: 195 IRKQVEFYFSDSNLPHDKFLLGKVGGSQNNP-VELSII---HSFKRMRHFQPFEAIVEAL 250
Query: 168 RKSKLLEVTEDGTKVRR----TVVVQDKPDVDECTIYVEK-LP------------PEAEH 210
R S LE+TED T VRR + + PD + I+ ++ +P P +
Sbjct: 251 RDSTFLELTEDETAVRRKEPLPESLNNGPDPNAIRIFEDRAMPRTVYAKGFGEEVPSTQF 310
Query: 211 DYIESVFSKYGKVTYVSLPKFKSTGKL-KGFAFVEFSTKEEAAKALELGLNP 261
D IE+ F+ YG V L ++ K+ KG FVEF T+E A K LEL P
Sbjct: 311 D-IEAFFAPYGPTNAVRL--RRTDDKIFKGSVFVEFETEELAKKFLELDPKP 359
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 43/72 (59%), Gaps = 9/72 (12%)
Query: 1 MEFYLSDSNLRKDRFFSQLL---QESPEIEVSVFLKCNKLARLTH-DP-DDVVKALRKSK 55
+EFY SDSNL D+F + Q +P +E+S+ + R+ H P + +V+ALR S
Sbjct: 199 VEFYFSDSNLPHDKFLLGKVGGSQNNP-VELSII---HSFKRMRHFQPFEAIVEALRDST 254
Query: 56 LLEVTEDGTKVK 67
LE+TED T V+
Sbjct: 255 FLELTEDETAVR 266
>gi|428183514|gb|EKX52372.1| hypothetical protein GUITHDRAFT_134049 [Guillardia theta CCMP2712]
Length = 462
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 73/165 (44%), Gaps = 19/165 (11%)
Query: 95 LQRKDGGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLA 154
+QR++G + + Q + FY SDSNL +D+F + ++
Sbjct: 126 VQRRNGSPLFSRTTVTGQ--RRIAFYFSDSNLPRDKFLQ--------------FEMGRMK 169
Query: 155 RLTHDPDDVVKALRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIE 214
L D+ + R+ LEV+ DG VRRT V D+ + TIYV+ IE
Sbjct: 170 TLRASVRDIAEGARRVDYLEVSPDGQWVRRTTPVLDQDALTNRTIYVDGFKSTDVGQLIE 229
Query: 215 S---VFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
+ F +YGKV V + T +L G FVEF + A + +E
Sbjct: 230 NAQEAFDEYGKVLSVRAVRHFRTKQLTGAVFVEFENENVAREVVE 274
>gi|54311334|gb|AAH84839.1| Laa-a protein [Xenopus laevis]
Length = 367
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 88/168 (52%), Gaps = 11/168 (6%)
Query: 99 DGGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFF-SQLLQESPEIEVSVFLKCNKLARLT 157
+ G + +K +I +E+Y D NL +D+F Q+L + + + +K N+L++LT
Sbjct: 3 ENGDKEQKLDSDTKICEQIEYYFGDHNLPRDKFLKQQILLDDGWVPLETMIKFNRLSKLT 62
Query: 158 HDPDDVVKALRKSK--LLEVTEDGTKVRRTVV-----VQD--KPDVDECTIYVEKLPPEA 208
D + +++AL+KSK LLE+ E+ K+RR+ + D K + ++Y++ P A
Sbjct: 63 TDFNTILQALKKSKTELLEINEEKCKIRRSPAKPLPELNDEYKNSLKHKSVYIKGFPTSA 122
Query: 209 EHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
D ++ G + + + + + KG F+ F+T ++A K LE
Sbjct: 123 ILDDVKEWLKDKGPIENIQMRRTLQR-EFKGSIFIIFNTDDDAKKFLE 169
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 46/70 (65%), Gaps = 3/70 (4%)
Query: 1 MEFYLSDSNLRKDRFF-SQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--LL 57
+E+Y D NL +D+F Q+L + + + +K N+L++LT D + +++AL+KSK LL
Sbjct: 21 IEYYFGDHNLPRDKFLKQQILLDDGWVPLETMIKFNRLSKLTTDFNTILQALKKSKTELL 80
Query: 58 EVTEDGTKVK 67
E+ E+ K++
Sbjct: 81 EINEEKCKIR 90
>gi|393228957|gb|EJD36590.1| hypothetical protein AURDEDRAFT_117059 [Auricularia delicata
TFB-10046 SS5]
Length = 506
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 80/170 (47%), Gaps = 11/170 (6%)
Query: 112 QIMNLMEFYLSDSNLRKDRFFSQLLQES------PEIEVSVFLKCNKLARLTHDPDDVVK 165
Q ++ +EFY +DSNL DRF +L + P V+ F + R + V
Sbjct: 34 QCLHQVEFYFADSNLPYDRFMWELHSKEGADHWVPLATVADFKRMRGF-RDKYGLPWVAD 92
Query: 166 ALRKS-KLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAE--HDYIESVFSKYGK 222
LR S +LL+V + G VRR V++ E T YV+ PE+E D +E F++Y
Sbjct: 93 QLRNSIELLQVNDAGDSVRRKTEVKEPKGQWERTAYVKGFGPESEASQDKLERFFAQYAA 152
Query: 223 VTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNPCPPDYQSSILT 272
V V + + K + KG FVEF+ + K L L P D + L+
Sbjct: 153 VNAVRM-RRKEDKEFKGSVFVEFANHADMEKFLALDPKPKWKDTELQCLS 201
>gi|449499592|ref|XP_002193861.2| PREDICTED: la-related protein 7-like [Taeniopygia guttata]
Length = 186
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 62/100 (62%), Gaps = 3/100 (3%)
Query: 105 RKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDD 162
R KQ+ I ++F+ D NL KDRF + +++S + +++S+ + NK+ +LT D
Sbjct: 32 RVKQVLADIAKQVDFWFGDVNLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKL 91
Query: 163 VVKALRKSKLLEVTEDGTKVRRTVVVQDKP-DVDECTIYV 201
+ +A++ S ++E+ +GT++RR + + P DVD T+YV
Sbjct: 92 IARAVKSSSVVELDLEGTRIRRRQPLGECPKDVDSRTVYV 131
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 46/69 (66%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
++F+ D NL KDRF + +++S + +++S+ + NK+ +LT D + +A++ S ++E
Sbjct: 44 VDFWFGDVNLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARAVKSSSVVE 103
Query: 59 VTEDGTKVK 67
+ +GT+++
Sbjct: 104 LDLEGTRIR 112
>gi|260806289|ref|XP_002598017.1| hypothetical protein BRAFLDRAFT_221607 [Branchiostoma floridae]
gi|229283287|gb|EEN54029.1| hypothetical protein BRAFLDRAFT_221607 [Branchiostoma floridae]
Length = 165
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 75/151 (49%), Gaps = 11/151 (7%)
Query: 117 MEFYLSDSNLRKDRFF-SQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKS--KLL 173
+++Y D NL +DRF ++ ++ + + +K N+L L+ D D + AL KS KL+
Sbjct: 1 LQYYFGDHNLTRDRFLQGEIKKDEGWVPLETLVKFNRLKALSEDYDVICAALEKSPSKLM 60
Query: 174 EVTEDGTKVRRT-------VVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYV 226
EV+ED TKVRR Q + + T+Y + + D I+ F GKV V
Sbjct: 61 EVSEDHTKVRRVPSKALPKNTEQWRSENKARTVYCKGFHQDDTLDVIQEFFQDKGKVETV 120
Query: 227 SLPKFKSTGKLKGFAFVEFSTKEEAAKALEL 257
+ + + KG F F + ++A K +E+
Sbjct: 121 YMRR-NENKEFKGSVFATFGSLDDAKKFVEM 150
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
Query: 1 MEFYLSDSNLRKDRFF-SQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKS--KLL 57
+++Y D NL +DRF ++ ++ + + +K N+L L+ D D + AL KS KL+
Sbjct: 1 LQYYFGDHNLTRDRFLQGEIKKDEGWVPLETLVKFNRLKALSEDYDVICAALEKSPSKLM 60
Query: 58 EVTEDGTKVK 67
EV+ED TKV+
Sbjct: 61 EVSEDHTKVR 70
>gi|414883314|tpg|DAA59328.1| TPA: hypothetical protein ZEAMMB73_430508 [Zea mays]
Length = 505
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 80/163 (49%), Gaps = 15/163 (9%)
Query: 109 LYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKA 166
+ Q+I+ +E+ SD NL + F +++ + E + +SV K+ L +VKA
Sbjct: 146 VAQKIVKQVEYQFSDINLVANEFLLKIMNKDTEGYVPLSVIASWKKIKSLGATNQMLVKA 205
Query: 167 LRKSKLLEVTEDGTKVRR--TVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVT 224
LR S L V++DG KVRR + K ++ I E LP ++ + +E +F G V
Sbjct: 206 LRTSTKLNVSDDGKKVRRRQAFTEKHKEELQSRMIIAENLPEDSSRNSLEKIFGVVGSVK 265
Query: 225 YVSL--PKFKSTGKL---------KGFAFVEFSTKEEAAKALE 256
+ + P+ +T + K A VE+ T ++A KA+E
Sbjct: 266 NIKICHPQEPNTARASKSDTLVSNKMHALVEYETSQQAEKAVE 308
>gi|333449438|gb|AEF33405.1| La autoantigen-like protein, partial [Crassostrea ariakensis]
Length = 302
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 80/161 (49%), Gaps = 16/161 (9%)
Query: 108 QLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN--KLARLTHDPDDVVK 165
+L +I+ +EFY SD+N+ KD F + ++ + + VS+ L + K+ LT D V
Sbjct: 80 ELKNRIIKQVEFYFSDANILKDAFLLKHVRRNKQGFVSIKLITSFKKVKSLTKDYRVVAY 139
Query: 166 ALRKSKLLEVTEDGTKVRRTVVVQDKPDVDECT----IYVEKLPPEAEHDYIESVFSKYG 221
+LR S LEV E+G KVRR + PD DE T I V LP E+ IE+V +
Sbjct: 140 SLRHSDKLEVNEEGRKVRRKDPL---PDWDETTPSRSIVVVNLP--MENPTIENVAEMFS 194
Query: 222 KVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNPC 262
K VSL + GK V K+ A K E+G C
Sbjct: 195 KCGEVSLIRILRPGK-----SVPQDVKKHATKHPEIGTTTC 230
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN--KLARLTHDPDDVVKALRKSKLLE 58
+EFY SD+N+ KD F + ++ + + VS+ L + K+ LT D V +LR S LE
Sbjct: 89 VEFYFSDANILKDAFLLKHVRRNKQGFVSIKLITSFKKVKSLTKDYRVVAYSLRHSDKLE 148
Query: 59 VTEDGTKVK 67
V E+G KV+
Sbjct: 149 VNEEGRKVR 157
>gi|345561076|gb|EGX44191.1| hypothetical protein AOL_s00210g63 [Arthrobotrys oligospora ATCC
24927]
Length = 418
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 90/161 (55%), Gaps = 12/161 (7%)
Query: 111 QQIMNLMEFYLSDSNLRKDRFFSQLL-QESPEIEVSVFLKCNKLARLTHDPDDVVKALRK 169
++I+ +EFY +DSNLR D+F L+ +E+ +++++ N++ R + D + KAL
Sbjct: 66 KEIVKQVEFYFADSNLRFDKFLYGLVGEENKWVDIALVAGFNRMRRFKN-LDSIKKALED 124
Query: 170 SKLLEVTEDGTKVRR---TVVVQDKPDVDEC---TIYVEKLPPEAEHDY--IESVFSKYG 221
S+L+E+ E+ TK+RR V+++D VD+ ++Y + E + IE F K G
Sbjct: 125 SELMELNEEKTKMRRKNAMVMLKDPKLVDKSITRSVYAKGFGAETKTSQFDIEKFFEKTG 184
Query: 222 KVTYVSLPKFKSTGKL-KGFAFVEFSTKEEAAKALELGLNP 261
+T ++ + K+ KG FVEF T E+ K ++L P
Sbjct: 185 -ITINAVRLRRDDDKVFKGSVFVEFKTVEDMKKFMDLEDKP 224
Score = 44.3 bits (103), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 45/68 (66%), Gaps = 2/68 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLL-QESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEV 59
+EFY +DSNLR D+F L+ +E+ +++++ N++ R + D + KAL S+L+E+
Sbjct: 72 VEFYFADSNLRFDKFLYGLVGEENKWVDIALVAGFNRMRRFKN-LDSIKKALEDSELMEL 130
Query: 60 TEDGTKVK 67
E+ TK++
Sbjct: 131 NEEKTKMR 138
>gi|224123276|ref|XP_002330276.1| predicted protein [Populus trichocarpa]
gi|222871311|gb|EEF08442.1| predicted protein [Populus trichocarpa]
Length = 297
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 92/186 (49%), Gaps = 16/186 (8%)
Query: 85 SDNVDKDLSDLQRKDGGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--I 142
S+N + +S+ K+ G L ++I+ +E+ LSD +L + S+ + + PE +
Sbjct: 62 SNNPNHAMSNCPSKNRGVL--TDDLREKIIKQVEYQLSDMSLLANESMSKHVSKDPEGYV 119
Query: 143 EVSVFLKCNKLARLTHDPDDVVKALRKSKLLEVTEDGTKVRRTVVVQDK--PDVDECTIY 200
++V K+ L D D + +AL+ S L + EDG KV+R + DK ++ +
Sbjct: 120 PIAVIASTKKMRSLVSDNDLLAQALKSSSKLVLAEDGKKVKRKLPFTDKHREELQSRIVV 179
Query: 201 VEKLPPEAEHDYIESVFSKYG--KVTYVSLPKFKSTGKLK-GF-------AFVEFSTKEE 250
VE LP + H ++ +FS G K + P+ ++ + K GF A VE ++
Sbjct: 180 VENLPDDHSHQNVQKIFSVIGSAKTIRICHPQESNSSRAKNGFFVTNKLHALVELESRVI 239
Query: 251 AAKALE 256
A KA+E
Sbjct: 240 AEKAVE 245
Score = 37.7 bits (86), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
+E+ LSD +L + S+ + + PE + ++V K+ L D D + +AL+ S L
Sbjct: 92 VEYQLSDMSLLANESMSKHVSKDPEGYVPIAVIASTKKMRSLVSDNDLLAQALKSSSKLV 151
Query: 59 VTEDGTKVK 67
+ EDG KVK
Sbjct: 152 LAEDGKKVK 160
>gi|429329604|gb|AFZ81363.1| RNA recognition motif domain-containing protein [Babesia equi]
Length = 494
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 48/81 (59%)
Query: 175 VTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKST 234
+ E+ K + + Q PD +C IY+ L P+ + + I ++FS +G++T + +P+ ST
Sbjct: 130 LNENKAKGKHSSSSQVVPDSQQCRIYIGSLDPDVKEEDIRTIFSSFGEITCIEMPRDPST 189
Query: 235 GKLKGFAFVEFSTKEEAAKAL 255
K KG+ FVE+ KE A A+
Sbjct: 190 NKSKGYCFVEYRKKESADVAI 210
>gi|303273574|ref|XP_003056147.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226462231|gb|EEH59523.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 213
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 85/172 (49%), Gaps = 19/172 (11%)
Query: 111 QQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNK----LARLTH-----D 159
Q++ +EFY SDSNL +D+F + ++ P +++S+ + ++ LAR+++
Sbjct: 24 QKVKEQVEFYFSDSNLPRDKFLRETVEADPAGYVDISLLMTFSRLRTLLARVSNAHHVES 83
Query: 160 PDDVVKALRKSKLLEVTEDGTKVRRTVVVQDK----PDVDECTIYVEKLPPEAEHDYIES 215
DV L SK+L V+ D +VRR ++ + +V++ ++Y P + D +
Sbjct: 84 AVDVAALLETSKVLAVSTDKRRVRRISELRPREVVDAEVEQRSVYASPFPMDVSIDDLTK 143
Query: 216 VFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAA----KALELGLNPCP 263
FSK+ K+ + L + S+ KG F+E A K+ EL + P
Sbjct: 144 FFSKHTKILSIRLRRHVSSKDFKGSIFLELPDAASCAALILKSGELEFDGAP 195
Score = 37.7 bits (86), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 44/78 (56%), Gaps = 11/78 (14%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNK----LARLTH-----DPDDVVK 49
+EFY SDSNL +D+F + ++ P +++S+ + ++ LAR+++ DV
Sbjct: 30 VEFYFSDSNLPRDKFLRETVEADPAGYVDISLLMTFSRLRTLLARVSNAHHVESAVDVAA 89
Query: 50 ALRKSKLLEVTEDGTKVK 67
L SK+L V+ D +V+
Sbjct: 90 LLETSKVLAVSTDKRRVR 107
>gi|241029467|ref|XP_002406445.1| lupus La ribonucleoprotein, putative [Ixodes scapularis]
gi|215491975|gb|EEC01616.1| lupus La ribonucleoprotein, putative [Ixodes scapularis]
Length = 197
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 84/161 (52%), Gaps = 12/161 (7%)
Query: 83 EASDNVDKDLSDLQRKDGGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPEI 142
E D DKD S L+ +G + +L Q+I+ +EFY SD N+ +D F + ++ + E
Sbjct: 12 EEDDTPDKD-SGLESLNGSSEE-EDELTQRIVAQVEFYFSDENILRDSFLLKHVRRNREG 69
Query: 143 EVSVFLKCN--KLARLTHDPDDVVKALRKSKL-LEVTEDGTKVRRTVVVQDKPDVDEC-- 197
VS+ L + K+ LT + + V +ALR S LEV +GTKVRR + PD DE
Sbjct: 70 YVSLKLMASFRKVKSLTKNWELVREALRASSTRLEVNAEGTKVRRR---EPLPDHDETAP 126
Query: 198 --TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGK 236
T+ LP A + I +FS+ G ++ + L + T +
Sbjct: 127 SRTVVAYPLPERASVEAIAEMFSRCGPISLLRLLRPGGTAR 167
Score = 37.4 bits (85), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN--KLARLTHDPDDVVKALRKSKL-L 57
+EFY SD N+ +D F + ++ + E VS+ L + K+ LT + + V +ALR S L
Sbjct: 44 VEFYFSDENILRDSFLLKHVRRNREGYVSLKLMASFRKVKSLTKNWELVREALRASSTRL 103
Query: 58 EVTEDGTKVK 67
EV +GTKV+
Sbjct: 104 EVNAEGTKVR 113
>gi|195161510|ref|XP_002021611.1| GL26419 [Drosophila persimilis]
gi|194103411|gb|EDW25454.1| GL26419 [Drosophila persimilis]
Length = 391
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 83/159 (52%), Gaps = 15/159 (9%)
Query: 113 IMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKS 170
I+ +E+Y D+NL +D+F + + ++ + + +SV + +LA L+ D D+++ AL KS
Sbjct: 56 IIRQVEYYFGDANLNRDKFLREQIAKNEDGWVPLSVLITFKRLATLSTDFDEIIAALNKS 115
Query: 171 K--LLEVTEDGTKVRR-------TVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYG 221
L++++ED +RR + + ++ E T Y + P ++ + FS Y
Sbjct: 116 DEGLVQISEDKQSLRRHPERPIPEHNEERRKEIQERTAYAKGFPLDSLMSELLDFFSSYE 175
Query: 222 KVTYVSLPKF----KSTGKLKGFAFVEFSTKEEAAKALE 256
KV +++ K + K KG F+ F TK++A LE
Sbjct: 176 KVVNITMRKHYDKPTKSYKFKGSIFLTFETKDQATAFLE 214
Score = 44.3 bits (103), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 51/87 (58%), Gaps = 8/87 (9%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSK--L 56
+E+Y D+NL +D+F + + ++ + + +SV + +LA L+ D D+++ AL KS L
Sbjct: 60 VEYYFGDANLNRDKFLREQIAKNEDGWVPLSVLITFKRLATLSTDFDEIIAALNKSDEGL 119
Query: 57 LEVTEDGTKVKGNIIRHFLVPISMETE 83
++++ED K ++ RH PI E
Sbjct: 120 VQISED----KQSLRRHPERPIPEHNE 142
>gi|444724342|gb|ELW64949.1| Lupus La protein like protein [Tupaia chinensis]
Length = 308
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 81/155 (52%), Gaps = 11/155 (7%)
Query: 109 LYQQIMNLMEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKAL 167
L +I + +E+Y D NL +D+F + ++ + + + + +K ++L LT D + +V+AL
Sbjct: 4 LEAKICHQIEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFSRLNHLTTDFNVIVEAL 63
Query: 168 RKSK--LLEVTEDGTKVRRT-------VVVQDKPDVDECTIYVEKLPPEAEHDYIESVFS 218
KSK L+E++ED TK+RR+ V + K DV ++Y++ P +A D I+
Sbjct: 64 SKSKAELMEISEDKTKIRRSPSKPLPEVTDEYKNDVKNRSVYIKGFPTDATLDDIKEWLE 123
Query: 219 KYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAK 253
G++ + + + KG F F ++ +
Sbjct: 124 GKGEILNIQMRRTLQKA-FKGSIFAVFENNDQTCR 157
Score = 44.7 bits (104), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 46/70 (65%), Gaps = 3/70 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--LL 57
+E+Y D NL +D+F + ++ + + + + +K ++L LT D + +V+AL KSK L+
Sbjct: 12 IEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFSRLNHLTTDFNVIVEALSKSKAELM 71
Query: 58 EVTEDGTKVK 67
E++ED TK++
Sbjct: 72 EISEDKTKIR 81
>gi|328865332|gb|EGG13718.1| Lupus La protein [Dictyostelium fasciculatum]
Length = 393
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 73/143 (51%), Gaps = 3/143 (2%)
Query: 109 LYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN--KLARLTHDPDDVVKA 166
L +IM +E+Y SDSN +D+F ++PE V++ + ++ +T D V +
Sbjct: 54 LSHKIMKQVEYYFSDSNFPRDKFLKGEAAKNPEGYVNIITIADFKRMKEMTSDLQLVTDS 113
Query: 167 LRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYV 226
L+ S L+V+ D +VRRT + D + + +Y + P E + ++ F+ YG T V
Sbjct: 114 LKNSSRLQVSPDEKQVRRTDPLPDDEEHAKKVLYSKGWPAETTIETVKEFFAPYGASTSV 173
Query: 227 SLPKFKSTGKLKGFAFVEFSTKE 249
L + + + KG +F ++E
Sbjct: 174 RLRR-RINNQFKGSLLADFESEE 195
>gi|296827208|ref|XP_002851134.1| lupus La protein [Arthroderma otae CBS 113480]
gi|238838688|gb|EEQ28350.1| lupus La protein [Arthroderma otae CBS 113480]
Length = 418
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 93/198 (46%), Gaps = 35/198 (17%)
Query: 86 DNVDKDLSDLQRKDGGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLL--QESPEIE 143
DN+ D + L+ D RK+ +EFY SDSNL D+F + E+ +E
Sbjct: 96 DNIKSDAASLEETDDPVEIRKQ---------VEFYFSDSNLPMDKFLLSKVGGSENKPVE 146
Query: 144 VSVFLKCNKLARLTHDP-DDVVKALRKSKLLEVTEDGTKVRRTV----VVQDKPDVDECT 198
+S+ ++ R P +V+ALR S+++E+ +D VRR + V+++ PDV
Sbjct: 147 LSLLHSFKRMRRFQ--PFSAIVEALRTSEVVELVDDDKSVRRKIPLPDVIKETPDVSAVK 204
Query: 199 IYVEKL-------------PPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEF 245
I+ +K P + D IE+ F+ YG V L + KG FVEF
Sbjct: 205 IFEDKAMNRSIYAKGFGEEEPSTQFD-IEAFFTPYGPTNAVRL-RRAIDKTFKGSVFVEF 262
Query: 246 STKEEAAKALELGLNPCP 263
T E+ KA L L+P P
Sbjct: 263 ET-EDLQKAF-LALDPKP 278
>gi|147901237|ref|NP_001081021.1| lupus La protein homolog A [Xenopus laevis]
gi|125890|sp|P28048.1|LAA_XENLA RecName: Full=Lupus La protein homolog A; AltName: Full=La
autoantigen homolog A; AltName: Full=La
ribonucleoprotein A
gi|64874|emb|CAA48715.1| La protein form A [Xenopus laevis]
Length = 428
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 88/168 (52%), Gaps = 11/168 (6%)
Query: 99 DGGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFF-SQLLQESPEIEVSVFLKCNKLARLT 157
+ G + +K +I +E+Y D NL +D+F Q+L + + + +K N+L++LT
Sbjct: 3 ENGDKEQKLDSDTKICEQIEYYFGDHNLPRDKFLKQQILLDDGWVPLETMIKFNRLSKLT 62
Query: 158 HDPDDVVKALRKSK--LLEVTEDGTKVRRTVV-----VQD--KPDVDECTIYVEKLPPEA 208
D + +++AL+KSK LLE+ E+ K+RR+ + D K + ++Y++ P A
Sbjct: 63 TDFNTILQALKKSKTELLEINEEKCKIRRSPAKPLPELNDEYKNSLKHKSVYIKGFPTSA 122
Query: 209 EHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
D ++ G + + + + + KG F+ F+T ++A K LE
Sbjct: 123 ILDDVKEWLKDKGPIENIQMRRTLQR-EFKGSIFIIFNTDDDAKKFLE 169
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 46/70 (65%), Gaps = 3/70 (4%)
Query: 1 MEFYLSDSNLRKDRFF-SQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--LL 57
+E+Y D NL +D+F Q+L + + + +K N+L++LT D + +++AL+KSK LL
Sbjct: 21 IEYYFGDHNLPRDKFLKQQILLDDGWVPLETMIKFNRLSKLTTDFNTILQALKKSKTELL 80
Query: 58 EVTEDGTKVK 67
E+ E+ K++
Sbjct: 81 EINEEKCKIR 90
>gi|68534045|gb|AAH98983.1| Laa-A-prov protein [Xenopus laevis]
Length = 428
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 88/168 (52%), Gaps = 11/168 (6%)
Query: 99 DGGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFF-SQLLQESPEIEVSVFLKCNKLARLT 157
+ G + +K +I +E+Y D NL +D+F Q+L + + + +K N+L++LT
Sbjct: 3 ENGDKEQKLDSDTKICEQIEYYFGDHNLPRDKFLKQQILLDDGWVPLETMIKFNRLSKLT 62
Query: 158 HDPDDVVKALRKSK--LLEVTEDGTKVRRTVV-----VQD--KPDVDECTIYVEKLPPEA 208
D + +++AL+KSK LLE+ E+ K+RR+ + D K + ++Y++ P A
Sbjct: 63 TDFNTILQALKKSKTELLEINEEKCKIRRSPAKPLPELNDEYKNSLKHKSVYIKGFPTSA 122
Query: 209 EHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
D ++ G + + + + + KG F+ F+T ++A K LE
Sbjct: 123 ILDDVKEWLKDKGPIENIQMRRTLQR-EFKGSIFIIFNTDDDAKKFLE 169
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 46/70 (65%), Gaps = 3/70 (4%)
Query: 1 MEFYLSDSNLRKDRFF-SQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--LL 57
+E+Y D NL +D+F Q+L + + + +K N+L++LT D + +++AL+KSK LL
Sbjct: 21 IEYYFGDHNLPRDKFLKQQILLDDGWVPLETMIKFNRLSKLTTDFNTILQALKKSKTELL 80
Query: 58 EVTEDGTKVK 67
E+ E+ K++
Sbjct: 81 EINEEKCKIR 90
>gi|388855928|emb|CCF50503.1| related to LHP1-RNA binding protein [Ustilago hordei]
Length = 453
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 82/165 (49%), Gaps = 13/165 (7%)
Query: 111 QQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSV-----FLKCNKLARLTHDPDDVVK 165
++ + +EFY DSNL D+F L ++ PE VS+ F + + + L D + +
Sbjct: 8 EEALRQVEFYFHDSNLPFDKFLFTLTRKDPEGWVSIATIASFKRMHAIKNLLG-LDGIAE 66
Query: 166 ALRKSK-LLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAE--HDYIESVFSKYGK 222
LR+SK LL+V+EDG VRR + D + +IY + E E +ES F+ +GK
Sbjct: 67 VLRRSKELLDVSEDGANVRRRKELVPVKDAFDRSIYAKGFGQETETLQKQLESFFNTFGK 126
Query: 223 VTYVSLPK-FKSTGK---LKGFAFVEFSTKEEAAKALELGLNPCP 263
V V + + ++ K KG FVEF+ ++ K L P
Sbjct: 127 VNSVRMRRDMEAATKPKPFKGSVFVEFADMDDRNKFLSQAAQKDP 171
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 47/84 (55%), Gaps = 10/84 (11%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSV-----FLKCNKLARLTHDPDDVVKALRKSK 55
+EFY DSNL D+F L ++ PE VS+ F + + + L D + + LR+SK
Sbjct: 14 VEFYFHDSNLPFDKFLFTLTRKDPEGWVSIATIASFKRMHAIKNLLG-LDGIAEVLRRSK 72
Query: 56 -LLEVTEDGTKVKGNIIRHFLVPI 78
LL+V+EDG V+ R LVP+
Sbjct: 73 ELLDVSEDGANVR---RRKELVPV 93
>gi|343424793|emb|CBQ68331.1| related to LHP1-RNA binding protein [Sporisorium reilianum SRZ2]
Length = 480
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 81/156 (51%), Gaps = 11/156 (7%)
Query: 111 QQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVF-LKCNKLARLTHD---PDDVVKA 166
Q+ + +EFY DSNL D+F L ++ PE V + + K R +D D + +
Sbjct: 38 QEALRQVEFYFHDSNLPFDKFLFTLTRKDPEGWVPIATIASFKRMRAINDLLGLDGIAEV 97
Query: 167 LRKSK-LLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAE--HDYIESVFSKYGKV 223
LR+SK LL+V+EDG VRR + D + ++Y + E E +E+ FS +G+V
Sbjct: 98 LRESKDLLDVSEDGQSVRRRKELVPVKDAFDRSVYAKGFGDETESLQKELETFFSTFGRV 157
Query: 224 TYVSLPK-FKSTGK---LKGFAFVEFSTKEEAAKAL 255
V + + +S+ K KG FVEF+ ++ K L
Sbjct: 158 NSVRMRRDMESSAKPKPFKGSVFVEFAEMDDRNKFL 193
Score = 40.8 bits (94), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 46/83 (55%), Gaps = 8/83 (9%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVF-LKCNKLARLTHD---PDDVVKALRKSK- 55
+EFY DSNL D+F L ++ PE V + + K R +D D + + LR+SK
Sbjct: 44 VEFYFHDSNLPFDKFLFTLTRKDPEGWVPIATIASFKRMRAINDLLGLDGIAEVLRESKD 103
Query: 56 LLEVTEDGTKVKGNIIRHFLVPI 78
LL+V+EDG V+ R LVP+
Sbjct: 104 LLDVSEDGQSVR---RRKELVPV 123
>gi|403417401|emb|CCM04101.1| predicted protein [Fibroporia radiculosa]
Length = 413
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 82/179 (45%), Gaps = 20/179 (11%)
Query: 114 MNLMEFYLSDSNLRKDRFFSQLLQESPE-----IEVSVFLKCNKLARLTHDPDDVVKALR 168
M EFY +DSNL F L +PE VS F + + L P+ + ALR
Sbjct: 63 MRQFEFYFADSNLP---FMWTLHTANPEHWVPIATVSSFKRMREYQSLG--PEWITNALR 117
Query: 169 KSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAE--HDYIESVFSKYGKVTYV 226
S+ LE+ +GT VRR V++ E +IY + E + +E F YGK V
Sbjct: 118 MSEDLEINAEGTHVRRRTEVKEPKGQFERSIYAKGFGDEVDGLQKELEVFFGNYGKTNAV 177
Query: 227 SLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNPCP-PDYQSSILTTTSRLSFGITPL 284
+ + T + KG FVEF+ K++E L+ P P ++ L ++ ++PL
Sbjct: 178 RMRRIDGTKEFKGSVFVEFAD----YKSVEAFLSADPKPSWKGEELLVMTKY---VSPL 229
>gi|351700442|gb|EHB03361.1| Lupus La protein [Heterocephalus glaber]
Length = 373
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 72/130 (55%), Gaps = 10/130 (7%)
Query: 109 LYQQIMNLMEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKAL 167
L +I + +E+Y D NL D+F + ++ + + + + +K N+L LT D + +V+AL
Sbjct: 13 LEAKICHQIEYYFGDFNLPWDKFLKEQIKLDEGWVPLEIMIKFNRLNCLTTDFNVIVEAL 72
Query: 168 RKSK--LLEVTEDGTKVRRT-------VVVQDKPDVDECTIYVEKLPPEAEHDYIESVFS 218
KSK L+E++ED TK RR+ V + K DV ++Y++ P +A D I++
Sbjct: 73 SKSKAELMEISEDKTKTRRSPNQPLPEVTDEYKNDVKNRSVYIKGFPTDATLDDIKAWLE 132
Query: 219 KYGKVTYVSL 228
G+V + +
Sbjct: 133 DKGQVLNIQM 142
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 44/70 (62%), Gaps = 3/70 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--LL 57
+E+Y D NL D+F + ++ + + + + +K N+L LT D + +V+AL KSK L+
Sbjct: 21 IEYYFGDFNLPWDKFLKEQIKLDEGWVPLEIMIKFNRLNCLTTDFNVIVEALSKSKAELM 80
Query: 58 EVTEDGTKVK 67
E++ED TK +
Sbjct: 81 EISEDKTKTR 90
>gi|336470963|gb|EGO59124.1| hypothetical protein NEUTE1DRAFT_78891 [Neurospora tetrasperma FGSC
2508]
gi|350292039|gb|EGZ73234.1| hypothetical protein NEUTE2DRAFT_107552 [Neurospora tetrasperma
FGSC 2509]
Length = 376
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 81/161 (50%), Gaps = 12/161 (7%)
Query: 112 QIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN-KLARLTHDPDDVVKALRKS 170
+I N +EFY SDSNL D+F + VS+ C+ K ++ VV AL++S
Sbjct: 84 KIRNQVEFYFSDSNLPTDKFMWETTGGVENKPVSLKTICSFKRMQMFQPYSAVVAALKES 143
Query: 171 KLLEVT-EDGTK-VRRTVVVQDKPDVDE----CTIYVEKLPPEAEHDY--IESVFSKYGK 222
L+V+ E+G + V+R D + ++YV+ E IE+ F+K+G+
Sbjct: 144 AFLDVSGEEGQETVKRKKAYTSSSDAQKARLAASVYVKGFGEETGSTQFDIEAFFTKFGQ 203
Query: 223 VTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNPCP 263
V V L + K KG FVEF T++E A A + LNP P
Sbjct: 204 VNLVKLRR-NEENKFKGSVFVEFKTEDE-ANAF-VALNPAP 241
>gi|332373914|gb|AEE62098.1| unknown [Dendroctonus ponderosae]
Length = 339
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 80/160 (50%), Gaps = 10/160 (6%)
Query: 108 QLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE-IEVSVFLKCNKLARLTHDPDDVVKA 166
+L ++I+ +EFY D NL +D+F + ++E + + LK N+LA L+ D + A
Sbjct: 4 ELEKKIIRQIEFYFGDINLPRDKFLLEKVKEDEGWVSLETMLKFNRLANLSKDLKVIADA 63
Query: 167 LRKS--KLLEVTEDGTKVRRTVVVQ--DKPD-----VDECTIYVEKLPPEAEHDYIESVF 217
L KS K++ + +D TKV+R Q D D + E + Y + P +AE + I
Sbjct: 64 LEKSEEKVVVLNDDKTKVKRNPEKQLPDNNDERLAKLREKSAYAKGFPLDAELNDIIDFM 123
Query: 218 SKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALEL 257
+YG + V + KG F+ F T E A K +EL
Sbjct: 124 DQYGPIESVIRRTHSKEHQFKGSCFIVFKTIELAKKFVEL 163
Score = 43.9 bits (102), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 54/101 (53%), Gaps = 13/101 (12%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE-IEVSVFLKCNKLARLTHDPDDVVKALRKS--KLL 57
+EFY D NL +D+F + ++E + + LK N+LA L+ D + AL KS K++
Sbjct: 13 IEFYFGDINLPRDKFLLEKVKEDEGWVSLETMLKFNRLANLSKDLKVIADALEKSEEKVV 72
Query: 58 EVTEDGTKVKGNIIRHFLVPISMETEASDNVDKDLSDLQRK 98
+ +D TKVK N P E + DN D+ L+ L+ K
Sbjct: 73 VLNDDKTKVKRN-------P---EKQLPDNNDERLAKLREK 103
>gi|85108121|ref|XP_962508.1| hypothetical protein NCU08295 [Neurospora crassa OR74A]
gi|28924116|gb|EAA33272.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 376
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 81/161 (50%), Gaps = 12/161 (7%)
Query: 112 QIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN-KLARLTHDPDDVVKALRKS 170
+I N +EFY SDSNL D+F + VS+ C+ K ++ VV AL++S
Sbjct: 84 KIRNQVEFYFSDSNLPTDKFMWETTGGVENKPVSLKTICSFKRMQMFQPYSAVVAALKES 143
Query: 171 KLLEVT-EDGTK-VRRTVVVQDKPDVDE----CTIYVEKLPPEAEHDY--IESVFSKYGK 222
L+V+ E+G + V+R D + ++YV+ E IE+ F+K+G+
Sbjct: 144 AFLDVSGEEGQETVKRKKAYTSSSDAQKARLAASVYVKGFGEETGSTQFDIEAFFTKFGQ 203
Query: 223 VTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNPCP 263
V V L + K KG FVEF T++E A A + LNP P
Sbjct: 204 VNLVKLRR-NEENKFKGSVFVEFKTEDE-ANAF-VALNPAP 241
>gi|326934325|ref|XP_003213241.1| PREDICTED: la-related protein 6-like [Meleagris gallopavo]
Length = 408
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 90/192 (46%), Gaps = 46/192 (23%)
Query: 108 QLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN--KLARLTHDPDDVVK 165
QL ++I++ +EFYLSD NL KD F + +Q++ VS+ L + K+ LT D +
Sbjct: 57 QLIRRIVSQVEFYLSDENLAKDAFLLKHVQKNKLGFVSIKLLTSFKKVKYLTRDWRLTLY 116
Query: 166 ALRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPP------------------E 207
ALR S+LLEV ++GTKVRR + + D + +PP
Sbjct: 117 ALRFSELLEVNQEGTKVRRRIPIPDS---------ILNVPPTKLLLAWDPLPPEPGPPPP 167
Query: 208 AEHDYIESV---FSKYGKVTYVSL--PKFKSTGKLKGF------------AFVEFSTKEE 250
+ ++IE++ FS +G + + + P K ++ + A VE+ + E
Sbjct: 168 LQRNFIETITQMFSPFGAIASIRILRPGRKLPSDMRKYATRFPELLSHCCALVEYESLES 227
Query: 251 AAKALELGLNPC 262
A +A E PC
Sbjct: 228 ARRACEELGQPC 239
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 45/72 (62%), Gaps = 2/72 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN--KLARLTHDPDDVVKALRKSKLLE 58
+EFYLSD NL KD F + +Q++ VS+ L + K+ LT D + ALR S+LLE
Sbjct: 66 VEFYLSDENLAKDAFLLKHVQKNKLGFVSIKLLTSFKKVKYLTRDWRLTLYALRFSELLE 125
Query: 59 VTEDGTKVKGNI 70
V ++GTKV+ I
Sbjct: 126 VNQEGTKVRRRI 137
>gi|261201664|ref|XP_002628046.1| RNA-binding La domain-containing protein [Ajellomyces dermatitidis
SLH14081]
gi|239590143|gb|EEQ72724.1| RNA-binding La domain-containing protein [Ajellomyces dermatitidis
SLH14081]
Length = 415
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 86/172 (50%), Gaps = 26/172 (15%)
Query: 112 QIMNLMEFYLSDSNLRKDRFFSQLL--QESPEIEVSVFLKCNKLARLTHDP-DDVVKALR 168
+I +EFY SDSNL D+F + E+ +E+S+ ++ R P VV AL+
Sbjct: 148 EIRKQVEFYFSDSNLLMDKFLLSKVGGSENRPVELSLLHSFKRMRRFQ--PFSAVVDALK 205
Query: 169 KSKLLEVTEDGTKVRRTVVVQD--KPDVD------------ECTIYVEKLPPEAEHDY-- 212
SK LE+T+D T VRR V + + K +D + +IY + PE
Sbjct: 206 DSKTLELTDDNTCVRRKVALPETVKESLDPTVVKLFEDKAMDRSIYAKGFGPEEPSTQFD 265
Query: 213 IESVFSKYGKVTYVSLPKFKSTGKL-KGFAFVEFSTKEEAAKALELGLNPCP 263
IE+ F+ YG + L ++ K+ KG FVEF + EEA KA L L+P P
Sbjct: 266 IEAFFTPYGPTNAIRL--RRTADKIFKGSVFVEFDS-EEAQKAF-LALDPKP 313
Score = 37.0 bits (84), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Query: 1 MEFYLSDSNLRKDRFFSQLL--QESPEIEVSVFLKCNKLARLTHDP-DDVVKALRKSKLL 57
+EFY SDSNL D+F + E+ +E+S+ ++ R P VV AL+ SK L
Sbjct: 153 VEFYFSDSNLLMDKFLLSKVGGSENRPVELSLLHSFKRMRRFQ--PFSAVVDALKDSKTL 210
Query: 58 EVTEDGTKVK 67
E+T+D T V+
Sbjct: 211 ELTDDNTCVR 220
>gi|348690259|gb|EGZ30073.1| hypothetical protein PHYSODRAFT_353726 [Phytophthora sojae]
Length = 201
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 38/61 (62%)
Query: 194 VDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAK 253
D TIY++ +HD + F+K+GKV VS+P+F + K KGF FVEF+ ++ A K
Sbjct: 35 ADARTIYIDSFGTTDDHDSLRRTFTKFGKVNLVSMPRFPQSKKFKGFGFVEFAEQDSAEK 94
Query: 254 A 254
A
Sbjct: 95 A 95
>gi|157137755|ref|XP_001657166.1| lupus la ribonucleoprotein [Aedes aegypti]
gi|108880823|gb|EAT45048.1| AAEL003664-PA [Aedes aegypti]
Length = 331
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 85/164 (51%), Gaps = 16/164 (9%)
Query: 108 QLYQQIMNLMEFYLSDSNLRKDRFFS-QLLQESPEIEVSVFLKCNKLARLTHDPDDVVKA 166
+L I+ +E+Y D+NL +D+F Q+ ++ + V V L +L L+ D +V A
Sbjct: 39 KLEGSIIRQLEYYFGDANLARDKFLQEQISKDEGWVPVDVLLTFKRLKSLSEDKKVIVDA 98
Query: 167 LRKSK--LLEVTEDGTKVR----RTVVVQDKPDVDEC---TIYVEKLPPEAEHDYIE--S 215
+ KS L+E++ED K+R R + Q++ E T+YV+ PE E
Sbjct: 99 IEKSDEGLIEISEDREKLRRHPERPLPEQNEETRKEIYGRTVYVKGFAPEEGTQMSELLE 158
Query: 216 VFSKYGKVTYVSLPKF--KSTGK--LKGFAFVEFSTKEEAAKAL 255
F + K+T + + K+ K+T K KG F+ F+TKE+ A+ L
Sbjct: 159 FFEPFNKITNIVMRKYHDKATKKYLFKGSVFLTFATKEDCAEFL 202
Score = 41.6 bits (96), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 7/88 (7%)
Query: 1 MEFYLSDSNLRKDRFFS-QLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--LL 57
+E+Y D+NL +D+F Q+ ++ + V V L +L L+ D +V A+ KS L+
Sbjct: 48 LEYYFGDANLARDKFLQEQISKDEGWVPVDVLLTFKRLKSLSEDKKVIVDAIEKSDEGLI 107
Query: 58 EVTEDGTKVKGNIIRHFLVPISMETEAS 85
E++ED K++ RH P+ + E +
Sbjct: 108 EISEDREKLR----RHPERPLPEQNEET 131
>gi|449018992|dbj|BAM82394.1| similar to developmental gene, multi-sex-combs [Cyanidioschyzon
merolae strain 10D]
Length = 510
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 66/126 (52%), Gaps = 8/126 (6%)
Query: 109 LYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKA 166
L +++ N +EFY SDSNL +D+F + PE +++ + + ++ +L + V A
Sbjct: 14 LEEKLRNQVEFYFSDSNLPRDKFLRARVDADPEGYVDLQLIVTFKRMKQLNATAEKVAAA 73
Query: 167 LRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPP------EAEHDYIESVFSKY 220
L S+L+EV+ DG +VRR + E +IYV+ P E + + +VF +
Sbjct: 74 LAGSELVEVSPDGQRVRRKKPLPLDDTSKERSIYVKGFKPGESPAAEPPIEDVMAVFEPF 133
Query: 221 GKVTYV 226
GKV V
Sbjct: 134 GKVLSV 139
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
+EFY SDSNL +D+F + PE +++ + + ++ +L + V AL S+L+E
Sbjct: 22 VEFYFSDSNLPRDKFLRARVDADPEGYVDLQLIVTFKRMKQLNATAEKVAAALAGSELVE 81
Query: 59 VTEDGTKVK 67
V+ DG +V+
Sbjct: 82 VSPDGQRVR 90
>gi|392563213|gb|EIW56392.1| hypothetical protein TRAVEDRAFT_49218 [Trametes versicolor
FP-101664 SS1]
Length = 494
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 88/186 (47%), Gaps = 12/186 (6%)
Query: 101 GGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARL---- 156
G + +K+ + +EFY +DSNL D+F L + E V + + R+
Sbjct: 38 GETNEEKEKMLSAVRQVEFYFADSNLPFDKFMWTLHTANSEHWVPIKTVAS-FKRMRDFQ 96
Query: 157 THDPDDVVKALRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPE--AEHDYIE 214
+ + VVKAL+ S+ LEV E G VRR VQ E +IY + E + +E
Sbjct: 97 SQGVEWVVKALQLSEELEVDEAGENVRRRTEVQPPKGQFERSIYAKGFGAEDPSLQKKLE 156
Query: 215 SVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNPCP-PDYQSSILTT 273
F+KYGK V + + T + KG FVEF+ +++E LN P P ++ L
Sbjct: 157 DFFNKYGKTNAVRMRRVDGTKEFKGSVFVEFAD----FQSVETFLNADPKPTWEDKELLI 212
Query: 274 TSRLSF 279
S+ ++
Sbjct: 213 MSKEAY 218
>gi|242047108|ref|XP_002461300.1| hypothetical protein SORBIDRAFT_02g000420 [Sorghum bicolor]
gi|241924677|gb|EER97821.1| hypothetical protein SORBIDRAFT_02g000420 [Sorghum bicolor]
Length = 516
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 78/161 (48%), Gaps = 15/161 (9%)
Query: 109 LYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALR 168
+ Q+I+ +E+ SD NL + F +++ + + E V K+ L +VKALR
Sbjct: 140 VAQKIVKQVEYQFSDINLVANEFLLKIMNK--DTEGYVIASWKKIKSLGATNQMLVKALR 197
Query: 169 KSKLLEVTEDGTKVRR--TVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYV 226
S L V++DG KVRR + K ++ I E LP ++ + +E +F G V +
Sbjct: 198 TSTKLNVSDDGKKVRRRQPFTEKHKEELQSRMIIAENLPEDSSRNSLEKIFGVVGSVKNI 257
Query: 227 SL--PKFKSTGKL---------KGFAFVEFSTKEEAAKALE 256
+ P+ ST + K A VE+ T ++A KA+E
Sbjct: 258 KICHPQEPSTARASKSDTLVSNKMHALVEYETSQQAEKAVE 298
>gi|186685885|ref|YP_001869081.1| RNP-1 like RNA-binding protein [Nostoc punctiforme PCC 73102]
gi|186468337|gb|ACC84138.1| RNP-1 like RNA-binding protein [Nostoc punctiforme PCC 73102]
Length = 109
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 40/60 (66%)
Query: 197 CTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
+IYV L E D + +VF++YG V V LP + TG+L+GFAFVE S+++E KA+E
Sbjct: 1 MSIYVGNLSYEVTQDALSTVFAEYGSVKRVQLPTDRETGRLRGFAFVEMSSEDEETKAIE 60
>gi|125892|sp|P28049.1|LAB_XENLA RecName: Full=Lupus La protein homolog B; AltName: Full=La
autoantigen homolog B; AltName: Full=La
ribonucleoprotein B
gi|64876|emb|CAA48716.1| La protein form B [Xenopus laevis]
Length = 427
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 87/159 (54%), Gaps = 13/159 (8%)
Query: 109 LYQQIMNLMEFYLSDSNLRKDRFF-SQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKAL 167
L +I +E+Y D NL +D+F Q+L ++ + + +K N+L++LT D + +++AL
Sbjct: 12 LDTKICEQIEYYFGDHNLPRDKFLKQQVLLDNGWVPLETMIKFNRLSKLTTDFNIILQAL 71
Query: 168 RKSK--LLEVTEDGTKVRRTVVVQDKPDVDE--------CTIYVEKLPPEAEHDYIESVF 217
+KSK LLE+ E+ K+RR+ + P+++E ++Y++ P D I+
Sbjct: 72 KKSKTELLEINEEKCKIRRS-PAKPLPELNEDYKNSFKHRSVYIKGFPTITNLDEIKEWL 130
Query: 218 SKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
+ G + + + + + KG F+ F+T++ A K LE
Sbjct: 131 NDKGPIENIQMRRTLQR-EFKGSVFLVFNTEDGAKKFLE 168
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 47/70 (67%), Gaps = 3/70 (4%)
Query: 1 MEFYLSDSNLRKDRFF-SQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--LL 57
+E+Y D NL +D+F Q+L ++ + + +K N+L++LT D + +++AL+KSK LL
Sbjct: 20 IEYYFGDHNLPRDKFLKQQVLLDNGWVPLETMIKFNRLSKLTTDFNIILQALKKSKTELL 79
Query: 58 EVTEDGTKVK 67
E+ E+ K++
Sbjct: 80 EINEEKCKIR 89
>gi|13957622|gb|AAK50577.1|AC084404_2 putative RNA-binding protein [Oryza sativa Japonica Group]
Length = 343
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 87/179 (48%), Gaps = 20/179 (11%)
Query: 98 KDGGGRHRKK-----QLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKC 150
K GGG + K + Q+I+ +E+ SD+NL + F +++ + PE + +SV
Sbjct: 97 KIGGGNGQPKGASPADIAQKIIKQVEYQFSDTNLVANDFLMKIMNKDPECYVPMSVISSW 156
Query: 151 NKLARLTHDPDDVVKALRKSKLLEVTEDGTKVRRT--VVVQDKPDVDECTIYVEKLPPEA 208
K+ + +V ALR S L V++DG KVRR + K ++ + E LP ++
Sbjct: 157 KKIKAMGVTNQLLVNALRTSSKLVVSDDGKKVRRAQPFTERHKEELQSRMVIAENLPEDS 216
Query: 209 EHDYIESVFSKYGKVTYVSL--PKFKSTGKL---------KGFAFVEFSTKEEAAKALE 256
+ +E +F G V + + P+ S+ + K A +E+ T ++A +A++
Sbjct: 217 TRNSLEKIFGIIGSVKNIRICHPQEPSSARSSKSDALISNKLHALIEYETSQQADRAVD 275
Score = 37.4 bits (85), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
+E+ SD+NL + F +++ + PE + +SV K+ + +V ALR S L
Sbjct: 121 VEYQFSDTNLVANDFLMKIMNKDPECYVPMSVISSWKKIKAMGVTNQLLVNALRTSSKLV 180
Query: 59 VTEDGTKVK 67
V++DG KV+
Sbjct: 181 VSDDGKKVR 189
>gi|218193164|gb|EEC75591.1| hypothetical protein OsI_12289 [Oryza sativa Indica Group]
Length = 429
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 87/179 (48%), Gaps = 20/179 (11%)
Query: 98 KDGGGRHRKK-----QLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKC 150
K GGG + K + Q+I+ +E+ SD+NL + F +++ + PE + +SV
Sbjct: 97 KIGGGNGQPKGASPADIAQKIIKQVEYQFSDTNLVANDFLMKIMNKDPECYVPMSVISSW 156
Query: 151 NKLARLTHDPDDVVKALRKSKLLEVTEDGTKVRRT--VVVQDKPDVDECTIYVEKLPPEA 208
K+ + +V ALR S L V++DG KVRR + K ++ + E LP ++
Sbjct: 157 KKIKAMGVTNQLLVNALRTSSKLVVSDDGKKVRRAQPFTERHKEELQSRMVIAENLPEDS 216
Query: 209 EHDYIESVFSKYGKVTYVSL--PKFKSTGKL---------KGFAFVEFSTKEEAAKALE 256
+ +E +F G V + + P+ S+ + K A +E+ T ++A +A++
Sbjct: 217 TRNSLEKIFGIIGSVKNIRICHPQEPSSARSSKSDALISNKLHALIEYETSQQADRAVD 275
Score = 37.4 bits (85), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
+E+ SD+NL + F +++ + PE + +SV K+ + +V ALR S L
Sbjct: 121 VEYQFSDTNLVANDFLMKIMNKDPECYVPMSVISSWKKIKAMGVTNQLLVNALRTSSKLV 180
Query: 59 VTEDGTKVK 67
V++DG KV+
Sbjct: 181 VSDDGKKVR 189
>gi|115453807|ref|NP_001050504.1| Os03g0566500 [Oryza sativa Japonica Group]
gi|108709366|gb|ABF97161.1| RNA-binding protein, putative, expressed [Oryza sativa Japonica
Group]
gi|113548975|dbj|BAF12418.1| Os03g0566500 [Oryza sativa Japonica Group]
gi|215697846|dbj|BAG92039.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625235|gb|EEE59367.1| hypothetical protein OsJ_11468 [Oryza sativa Japonica Group]
Length = 429
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 87/179 (48%), Gaps = 20/179 (11%)
Query: 98 KDGGGRHRKK-----QLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKC 150
K GGG + K + Q+I+ +E+ SD+NL + F +++ + PE + +SV
Sbjct: 97 KIGGGNGQPKGASPADIAQKIIKQVEYQFSDTNLVANDFLMKIMNKDPECYVPMSVISSW 156
Query: 151 NKLARLTHDPDDVVKALRKSKLLEVTEDGTKVRRT--VVVQDKPDVDECTIYVEKLPPEA 208
K+ + +V ALR S L V++DG KVRR + K ++ + E LP ++
Sbjct: 157 KKIKAMGVTNQLLVNALRTSSKLVVSDDGKKVRRAQPFTERHKEELQSRMVIAENLPEDS 216
Query: 209 EHDYIESVFSKYGKVTYVSL--PKFKSTGKL---------KGFAFVEFSTKEEAAKALE 256
+ +E +F G V + + P+ S+ + K A +E+ T ++A +A++
Sbjct: 217 TRNSLEKIFGIIGSVKNIRICHPQEPSSARSSKSDALISNKLHALIEYETSQQADRAVD 275
Score = 37.4 bits (85), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
+E+ SD+NL + F +++ + PE + +SV K+ + +V ALR S L
Sbjct: 121 VEYQFSDTNLVANDFLMKIMNKDPECYVPMSVISSWKKIKAMGVTNQLLVNALRTSSKLV 180
Query: 59 VTEDGTKVK 67
V++DG KV+
Sbjct: 181 VSDDGKKVR 189
>gi|357160449|ref|XP_003578768.1| PREDICTED: uncharacterized protein LOC100829244 [Brachypodium
distachyon]
Length = 453
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 76/168 (45%), Gaps = 21/168 (12%)
Query: 111 QQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALR 168
Q+I +E+Y SD NL + + + P+ + +SV K+ L H+ + ALR
Sbjct: 121 QKITKQVEYYFSDINLATTEHLMRFISKDPQGYVPISVIAGFKKIKALVHNNSMLAAALR 180
Query: 169 KSKLLEVTEDGTKVRR--TVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYV 226
S L V++DG +++R D D + E LP + + + +FS G V +
Sbjct: 181 TSSKLVVSDDGKRIKRRQPFTESDMQDFQSRIVVAENLPGDPSYQNLMKIFSVVGSVRAI 240
Query: 227 ----------SLPKFKSTGKL------KGFAFVEFSTKEEAAKA-LEL 257
+ P + KL K AFVE+ T+E+A KA LEL
Sbjct: 241 RTCYPQTPNGTGPATNRSAKLDMLFANKLHAFVEYETREDAEKASLEL 288
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
+E+Y SD NL + + + P+ + +SV K+ L H+ + ALR S L
Sbjct: 127 VEYYFSDINLATTEHLMRFISKDPQGYVPISVIAGFKKIKALVHNNSMLAAALRTSSKLV 186
Query: 59 VTEDGTKVK 67
V++DG ++K
Sbjct: 187 VSDDGKRIK 195
>gi|422304104|ref|ZP_16391453.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9806]
gi|389790787|emb|CCI13324.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9806]
Length = 97
Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/58 (51%), Positives = 38/58 (65%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKAL 255
+IYV LP E + D + VF +YGK+ V LP + TGK +GFAFVE T EE AKA+
Sbjct: 2 SIYVGNLPFEVDQDDVVEVFKEYGKIKRVHLPMDRETGKKRGFAFVEMETPEEEAKAI 59
>gi|242081989|ref|XP_002445763.1| hypothetical protein SORBIDRAFT_07g025380 [Sorghum bicolor]
gi|241942113|gb|EES15258.1| hypothetical protein SORBIDRAFT_07g025380 [Sorghum bicolor]
Length = 437
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 87/182 (47%), Gaps = 21/182 (11%)
Query: 94 DLQRKDGGGRHRKKQL----YQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVF 147
D + G G+ ++ +L ++++ +EFY SD NL + + + P+ + +SV
Sbjct: 96 DREGPAGAGQAQQHRLPEPEARKLVKQVEFYFSDINLATTEHLMKFITKDPDGFVPISVV 155
Query: 148 LKCNKLARLTHDPDDVVKALRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPE 207
K+ + +D +V ALR S L V+EDG +V+R+ + +V + E LP +
Sbjct: 156 ASFRKIREIVYDRSLLVAALRASSELVVSEDGKQVKRSQPF-NAEEVQSRIVVAENLPED 214
Query: 208 AEHDYIESVFSKYGKVTY--------VSLPKFKSTGKL------KGFAFVEFSTKEEAAK 253
+H + +FS G V V+ T ++ K AFVE+ST E+A K
Sbjct: 215 QKHQTLMKIFSAVGSVKSIRTCYPQDVAAAAANKTSRIEMIFANKLHAFVEYSTVEDAEK 274
Query: 254 AL 255
A+
Sbjct: 275 AV 276
Score = 40.4 bits (93), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
+EFY SD NL + + + P+ + +SV K+ + +D +V ALR S L
Sbjct: 123 VEFYFSDINLATTEHLMKFITKDPDGFVPISVVASFRKIREIVYDRSLLVAALRASSELV 182
Query: 59 VTEDGTKVK 67
V+EDG +VK
Sbjct: 183 VSEDGKQVK 191
>gi|53130686|emb|CAG31672.1| hypothetical protein RCJMB04_9h4 [Gallus gallus]
Length = 137
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 68/125 (54%), Gaps = 10/125 (8%)
Query: 109 LYQQIMNLMEFYLSDSNLRKDRFF-SQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKAL 167
L +I +E+Y + NL +D+F Q+ + + + V +K N+L+RL+ D +V+AL
Sbjct: 13 LESKICQQIEYYFGNHNLPRDKFLKEQIKLDDGWVPLEVMIKFNRLSRLSKDFGVIVEAL 72
Query: 168 RKSK--LLEVTEDGTKVRRT-------VVVQDKPDVDECTIYVEKLPPEAEHDYIESVFS 218
RKSK L+E+ ED TK+RR+ + Q K + ++YV+ P +A D I+
Sbjct: 73 RKSKTGLMEINEDKTKIRRSPNKPLPELNDQYKAAIKNRSVYVKGFPLDATLDDIKEWLE 132
Query: 219 KYGKV 223
G V
Sbjct: 133 DKGPV 137
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 46/70 (65%), Gaps = 3/70 (4%)
Query: 1 MEFYLSDSNLRKDRFF-SQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--LL 57
+E+Y + NL +D+F Q+ + + + V +K N+L+RL+ D +V+ALRKSK L+
Sbjct: 21 IEYYFGNHNLPRDKFLKEQIKLDDGWVPLEVMIKFNRLSRLSKDFGVIVEALRKSKTGLM 80
Query: 58 EVTEDGTKVK 67
E+ ED TK++
Sbjct: 81 EINEDKTKIR 90
>gi|383848821|ref|XP_003700046.1| PREDICTED: la protein homolog [Megachile rotundata]
Length = 406
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 83/157 (52%), Gaps = 12/157 (7%)
Query: 107 KQLYQQIMNLMEFYLSDSNLRKDRFF-SQLLQESPEIEVSVFLKCNKLARLTHDPDDVVK 165
K+L ++I N +EFY D N+++D+F Q + I ++V L L ++ D + ++K
Sbjct: 44 KELLEKIKNQIEFYFGDVNMQRDKFLIEQTKLDDGWIPMTVMLNFKMLTSMSTDTEVILK 103
Query: 166 ALRKSKLLEVTEDGTKVRRT------VVVQDKPDVDEC-TIYVEKLP-PEAEHDYIESVF 217
AL S+L+E++ED K+RR+ V ++ E TIY++ P + + +++ F
Sbjct: 104 ALESSELMEISEDRKKIRRSPKHPLPVYNEEYRKAQEARTIYLKGFPLNDTNIEKLKTFF 163
Query: 218 SKYGKVTYVSLPKFKSTGK---LKGFAFVEFSTKEEA 251
S Y + + K+ K KG F++F T E+A
Sbjct: 164 SVYEPFENIIMRKYLDKEKKLQFKGSIFIQFKTLEDA 200
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 1 MEFYLSDSNLRKDRFF-SQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEV 59
+EFY D N+++D+F Q + I ++V L L ++ D + ++KAL S+L+E+
Sbjct: 54 IEFYFGDVNMQRDKFLIEQTKLDDGWIPMTVMLNFKMLTSMSTDTEVILKALESSELMEI 113
Query: 60 TEDGTKVK 67
+ED K++
Sbjct: 114 SEDRKKIR 121
>gi|357617844|gb|EHJ71027.1| hypothetical protein KGM_09976 [Danaus plexippus]
Length = 384
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 84/165 (50%), Gaps = 14/165 (8%)
Query: 106 KKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVV 164
K +L I+ +E+Y D NL +D+F + ++ + + + V + N+LA+LT D +
Sbjct: 37 KSELDSSIIRQIEYYFGDLNLPRDKFLREQVKLDDGWVPLEVLTRFNRLAKLTTDIGVIA 96
Query: 165 KALRKSK--LLEVTEDGTKVRRT-------VVVQDKPDVDECTIYVEKLPPEAEHDYIES 215
A+ KS LLE+++D KVRR + + + ++ TIY + +A D I
Sbjct: 97 NAISKSTSGLLEISDDNLKVRRNPELPIPEMNEERRKELVSRTIYAKGFGKDASLDDILK 156
Query: 216 VFSKYGKVTYVSLPKFKS----TGKLKGFAFVEFSTKEEAAKALE 256
F ++ +V + + K++ T KG F F TK++A K +E
Sbjct: 157 YFKQFEEVENIIMRKYQDRKTKTFIFKGSVFATFKTKDQADKFME 201
Score = 41.6 bits (96), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--LL 57
+E+Y D NL +D+F + ++ + + + V + N+LA+LT D + A+ KS LL
Sbjct: 48 IEYYFGDLNLPRDKFLREQVKLDDGWVPLEVLTRFNRLAKLTTDIGVIANAISKSTSGLL 107
Query: 58 EVTEDGTKVKGN 69
E+++D KV+ N
Sbjct: 108 EISDDNLKVRRN 119
>gi|429962367|gb|ELA41911.1| hypothetical protein VICG_01095 [Vittaforma corneae ATCC 50505]
Length = 360
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 79/150 (52%), Gaps = 11/150 (7%)
Query: 117 MEFYLSDSNLRKDRFFSQLLQESPE-IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEV 175
+EFY SDSN +D+F E+ I +SV L +L ++ D + +A+R SK++E+
Sbjct: 58 IEFYFSDSNYSRDKFMIAKASENDGFIPISVLLTFKRLQAMSPSVDQIKEAVRDSKIVEI 117
Query: 176 TEDGTKVRRTVVVQDKPD------VDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLP 229
++ + R V Q+ D + + +Y++ ++ D I+ + +Y K +++
Sbjct: 118 KDN---LLRKVQTQEFKDYLNDKQISKRVLYMKGFGLDSTLDKIKEILERYCKPVRITMR 174
Query: 230 KFKSTGKLKGFAFVEFSTKEEAAKALELGL 259
+ + KG FVEFS+KEEA A+ L +
Sbjct: 175 R-SEDRRFKGSCFVEFSSKEEAEAAINLKI 203
Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE-IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEV 59
+EFY SDSN +D+F E+ I +SV L +L ++ D + +A+R SK++E+
Sbjct: 58 IEFYFSDSNYSRDKFMIAKASENDGFIPISVLLTFKRLQAMSPSVDQIKEAVRDSKIVEI 117
Query: 60 TED 62
++
Sbjct: 118 KDN 120
>gi|157137753|ref|XP_001657165.1| lupus la ribonucleoprotein [Aedes aegypti]
gi|108880822|gb|EAT45047.1| AAEL003664-PB [Aedes aegypti]
Length = 393
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 85/164 (51%), Gaps = 16/164 (9%)
Query: 108 QLYQQIMNLMEFYLSDSNLRKDRFFS-QLLQESPEIEVSVFLKCNKLARLTHDPDDVVKA 166
+L I+ +E+Y D+NL +D+F Q+ ++ + V V L +L L+ D +V A
Sbjct: 39 KLEGSIIRQLEYYFGDANLARDKFLQEQISKDEGWVPVDVLLTFKRLKSLSEDKKVIVDA 98
Query: 167 LRKSK--LLEVTEDGTKVR----RTVVVQDKPDVDEC---TIYVEKLPPEAEHDYIE--S 215
+ KS L+E++ED K+R R + Q++ E T+YV+ PE E
Sbjct: 99 IEKSDEGLIEISEDREKLRRHPERPLPEQNEETRKEIYGRTVYVKGFAPEEGTQMSELLE 158
Query: 216 VFSKYGKVTYVSLPKF--KSTGK--LKGFAFVEFSTKEEAAKAL 255
F + K+T + + K+ K+T K KG F+ F+TKE+ A+ L
Sbjct: 159 FFEPFNKITNIVMRKYHDKATKKYLFKGSVFLTFATKEDCAEFL 202
Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 7/88 (7%)
Query: 1 MEFYLSDSNLRKDRFFS-QLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--LL 57
+E+Y D+NL +D+F Q+ ++ + V V L +L L+ D +V A+ KS L+
Sbjct: 48 LEYYFGDANLARDKFLQEQISKDEGWVPVDVLLTFKRLKSLSEDKKVIVDAIEKSDEGLI 107
Query: 58 EVTEDGTKVKGNIIRHFLVPISMETEAS 85
E++ED K++ RH P+ + E +
Sbjct: 108 EISEDREKLR----RHPERPLPEQNEET 131
>gi|320590679|gb|EFX03122.1| RNA-binding la domain containing protein [Grosmannia clavigera
kw1407]
Length = 259
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 84/176 (47%), Gaps = 13/176 (7%)
Query: 113 IMNLMEFYLSDSNLRKDRFFSQLL--QESPEIEVSVFLKCNKLARLTHDPDDVVKALRKS 170
I + FY SDSNL D++ +L E+ +E+ + ++ R + VV AL S
Sbjct: 41 IQTQVHFYFSDSNLPTDKYLWELTGGSENKPVELKKICQFGRMRRF-KSYETVVAALASS 99
Query: 171 KLLEVTEDG---TKVRRTVVVQDKP--DVDECTIYVEKL---PPEAEHDYIESVFSKYGK 222
K + VT + T R+ D+P +D T+YV+ P + D +E+ F+K+G
Sbjct: 100 KFVVVTGEAGQETVARKNAYNADRPRSKIDAATVYVKGFGDEEPSTQFD-LEAFFTKHGA 158
Query: 223 VTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNPCPPDYQSSILTTTSRLS 278
V V L + + KG FVEF ++A + L L P D + I++ + ++
Sbjct: 159 VNAVRLRR-TADNLFKGSVFVEFQDADQAVRFLALDPKPTWRDSELKIMSKAAYVA 213
>gi|28436825|gb|AAH46654.1| Ssb-b protein [Xenopus laevis]
Length = 427
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 86/159 (54%), Gaps = 13/159 (8%)
Query: 109 LYQQIMNLMEFYLSDSNLRKDRFF-SQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKAL 167
L +I +E+Y D NL +D+F Q+L + + + +K N+L++LT D + +++AL
Sbjct: 12 LDTKICEQIEYYFGDHNLPRDKFLKQQVLLDDGWVPLETMIKFNRLSKLTTDFNIILQAL 71
Query: 168 RKSK--LLEVTEDGTKVRRTVVVQDKPDVDE--------CTIYVEKLPPEAEHDYIESVF 217
+KSK LLE+ E+ K+RR+ + P+++E ++Y++ P D I+
Sbjct: 72 KKSKTELLEINEEKCKIRRS-PAKPLPELNEDYKNSFKHRSVYIKGFPTITNLDEIKEWL 130
Query: 218 SKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
+ G + + + + + KG F+ F+T++ A K LE
Sbjct: 131 NDKGPIENIQMRRTLQR-EFKGSVFLVFNTEDGAKKFLE 168
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 46/70 (65%), Gaps = 3/70 (4%)
Query: 1 MEFYLSDSNLRKDRFF-SQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--LL 57
+E+Y D NL +D+F Q+L + + + +K N+L++LT D + +++AL+KSK LL
Sbjct: 20 IEYYFGDHNLPRDKFLKQQVLLDDGWVPLETMIKFNRLSKLTTDFNIILQALKKSKTELL 79
Query: 58 EVTEDGTKVK 67
E+ E+ K++
Sbjct: 80 EINEEKCKIR 89
>gi|125984534|ref|XP_001356031.1| GA10645 [Drosophila pseudoobscura pseudoobscura]
gi|54644349|gb|EAL33090.1| GA10645 [Drosophila pseudoobscura pseudoobscura]
Length = 392
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 83/159 (52%), Gaps = 15/159 (9%)
Query: 113 IMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKS 170
I+ +E+Y D+NL +D+F + + ++ + + +SV + +LA L+ D D+++ AL KS
Sbjct: 56 IIRQVEYYFGDANLNRDKFLREQIAKNEDGWVPLSVLITFKRLATLSTDFDEIIAALNKS 115
Query: 171 K--LLEVTEDGTKVRR-------TVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYG 221
L++++ED +RR + + ++ E T Y + P ++ + F+ Y
Sbjct: 116 DEGLVQISEDKQSLRRHPERPIPEHNEERRKEIQERTAYAKGFPLDSLISELLDFFASYE 175
Query: 222 KVTYVSLPKF----KSTGKLKGFAFVEFSTKEEAAKALE 256
KV +++ K + K KG F+ F TK++A LE
Sbjct: 176 KVVNITMRKHYDKPTKSYKFKGSIFLTFETKDQATAFLE 214
Score = 44.3 bits (103), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 51/87 (58%), Gaps = 8/87 (9%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSK--L 56
+E+Y D+NL +D+F + + ++ + + +SV + +LA L+ D D+++ AL KS L
Sbjct: 60 VEYYFGDANLNRDKFLREQIAKNEDGWVPLSVLITFKRLATLSTDFDEIIAALNKSDEGL 119
Query: 57 LEVTEDGTKVKGNIIRHFLVPISMETE 83
++++ED K ++ RH PI E
Sbjct: 120 VQISED----KQSLRRHPERPIPEHNE 142
>gi|148228012|ref|NP_001079637.1| lupus La protein homolog B [Xenopus laevis]
gi|80476833|gb|AAI08783.1| Ssb-b protein [Xenopus laevis]
Length = 427
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 86/159 (54%), Gaps = 13/159 (8%)
Query: 109 LYQQIMNLMEFYLSDSNLRKDRFF-SQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKAL 167
L +I +E+Y D NL +D+F Q+L + + + +K N+L++LT D + +++AL
Sbjct: 12 LDTKICEQIEYYFGDHNLPRDKFLKQQVLLDDGWVPLETMIKFNRLSKLTTDFNIILQAL 71
Query: 168 RKSK--LLEVTEDGTKVRRTVVVQDKPDVDE--------CTIYVEKLPPEAEHDYIESVF 217
+KSK LLE+ E+ K+RR+ + P+++E ++Y++ P D I+
Sbjct: 72 KKSKTELLEINEEKCKIRRS-PAKPLPELNEDYKNSFKHRSVYIKGFPTITNLDEIKEWL 130
Query: 218 SKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
+ G + + + + + KG F+ F+T++ A K LE
Sbjct: 131 NDKGPIENIQMRRTLQR-EFKGSVFLVFNTEDGAKKFLE 168
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 46/70 (65%), Gaps = 3/70 (4%)
Query: 1 MEFYLSDSNLRKDRFF-SQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--LL 57
+E+Y D NL +D+F Q+L + + + +K N+L++LT D + +++AL+KSK LL
Sbjct: 20 IEYYFGDHNLPRDKFLKQQVLLDDGWVPLETMIKFNRLSKLTTDFNIILQALKKSKTELL 79
Query: 58 EVTEDGTKVK 67
E+ E+ K++
Sbjct: 80 EINEEKCKIR 89
>gi|255076043|ref|XP_002501696.1| predicted protein [Micromonas sp. RCC299]
gi|226516960|gb|ACO62954.1| predicted protein [Micromonas sp. RCC299]
Length = 396
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 81/169 (47%), Gaps = 24/169 (14%)
Query: 112 QIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKC--NKLARL--THDPDDVVKAL 167
+I+ +EFY SD+NL D F + ++ P V + + C N++ L H P + V A+
Sbjct: 66 KIVKQVEFYFSDANLPTDAFLMKKVRADPNGFVPIGVVCGFNRMKTLLKKHPPIETVAAI 125
Query: 168 --RKSKLLEVTEDGTKVRRTVVVQDK--PDVDECTIYVEKLPPEAEHDYIESVFSKYGKV 223
+ S+ L V+EDG +VRR + D DV T+ E + + + +FS G V
Sbjct: 126 LRQHSEALVVSEDGIRVRRATPLPDIDLEDVQARTVVAENFKTQPTIESVRDLFSAAGDV 185
Query: 224 TYVSL--PKFKSTG---KLKGF-----------AFVEFSTKEEAAKALE 256
V + P ++ K G A +EF+T+++AA+A E
Sbjct: 186 AMVRVRHPGMQTPAGATKPSGLDLIATPSNAVHALIEFNTRDDAARAAE 234
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKC--NKLARL--THDPDDVVKAL--RKS 54
+EFY SD+NL D F + ++ P V + + C N++ L H P + V A+ + S
Sbjct: 71 VEFYFSDANLPTDAFLMKKVRADPNGFVPIGVVCGFNRMKTLLKKHPPIETVAAILRQHS 130
Query: 55 KLLEVTEDGTKVK 67
+ L V+EDG +V+
Sbjct: 131 EALVVSEDGIRVR 143
>gi|425455329|ref|ZP_18835049.1| putative RNA-binding protein rbpB [Microcystis aeruginosa PCC 9807]
gi|389803795|emb|CCI17308.1| putative RNA-binding protein rbpB [Microcystis aeruginosa PCC 9807]
Length = 100
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 40/60 (66%)
Query: 197 CTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
TIYV L E + ++ VF++YG V V LP ++TGK++GF FVE S+ EE AKA+E
Sbjct: 1 MTIYVGNLVYEVTKEDLQGVFAEYGTVVRVYLPVDQATGKMRGFGFVEMSSDEEEAKAIE 60
>gi|384496101|gb|EIE86592.1| hypothetical protein RO3G_11303 [Rhizopus delemar RA 99-880]
Length = 274
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 80/163 (49%), Gaps = 19/163 (11%)
Query: 111 QQIMNLMEFYLSDSNLRKDRFFSQLLQ--ESPEIEVSVFLKCNKLARLTHDPDDVVKALR 168
++I FY SDSNL D+F L E+ I +SV ++ +T D D V+KALR
Sbjct: 8 EKIRKQFNFYFSDSNLPYDKFLWTLHSNAENGWIPLSVIAGFKRIQMITTDLDVVLKALR 67
Query: 169 K--SKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLP---PEAE---------HDYIE 214
+ S + E+ E+G +RR V ++ V +++V+ P +AE D I+
Sbjct: 68 EQESDVYEIDEEGKNIRRKGQVVEQDHVSR-SVHVKGFPLVDVDAEKPADKLIELQDKID 126
Query: 215 SVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALEL 257
F++ KV L K K KG A+VEF E+A K EL
Sbjct: 127 DFFNEKAKVLCTRLKK--DGRKFKGTAYVEFENPEQAKKIAEL 167
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 49/95 (51%), Gaps = 6/95 (6%)
Query: 3 FYLSDSNLRKDRFFSQLLQ--ESPEIEVSVFLKCNKLARLTHDPDDVVKALR--KSKLLE 58
FY SDSNL D+F L E+ I +SV ++ +T D D V+KALR +S + E
Sbjct: 16 FYFSDSNLPYDKFLWTLHSNAENGWIPLSVIAGFKRIQMITTDLDVVLKALREQESDVYE 75
Query: 59 VTEDGTKV--KGNIIRHFLVPISMETEASDNVDKD 91
+ E+G + KG ++ V S+ + VD D
Sbjct: 76 IDEEGKNIRRKGQVVEQDHVSRSVHVKGFPLVDVD 110
>gi|350396179|ref|XP_003484468.1| PREDICTED: la protein homolog [Bombus impatiens]
Length = 421
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 84/156 (53%), Gaps = 12/156 (7%)
Query: 108 QLYQQIMNLMEFYLSDSNLRKDRFF-SQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKA 166
+L ++I N +EFY D N+++D+F Q + + +++ L LA ++ D + +++A
Sbjct: 57 ELLERIKNQVEFYFGDVNMQRDKFLIEQTKLDEGWVPMTIMLNFKLLASMSQDINVILEA 116
Query: 167 LRKSKLLEVTEDGTKVRRT------VVVQDKPDVDEC-TIYVEKLP-PEAEHDYIESVFS 218
++ S+L+E++ED K+RR+ + ++ E T+Y++ P + + +++ FS
Sbjct: 117 IKSSELMEISEDRKKIRRSPKHPLPIYNEEYRKAQEAKTVYIKGFPLQDTTIEKLKTFFS 176
Query: 219 KYGKVTYVSLPKFKSTGK---LKGFAFVEFSTKEEA 251
Y + + K+ K KG FV+F T E+A
Sbjct: 177 AYEPFDNIVMRKYMDKEKKLQFKGSIFVQFKTLEDA 212
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 1 MEFYLSDSNLRKDRFF-SQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEV 59
+EFY D N+++D+F Q + + +++ L LA ++ D + +++A++ S+L+E+
Sbjct: 66 VEFYFGDVNMQRDKFLIEQTKLDEGWVPMTIMLNFKLLASMSQDINVILEAIKSSELMEI 125
Query: 60 TEDGTKVK 67
+ED K++
Sbjct: 126 SEDRKKIR 133
>gi|449473064|ref|XP_004153773.1| PREDICTED: uncharacterized protein LOC101217948, partial [Cucumis
sativus]
Length = 393
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 92/178 (51%), Gaps = 16/178 (8%)
Query: 94 DLQRKDGGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCN 151
++Q + R +++ Q+I+ +E+ LSD +L + ++ + + P+ + +S+
Sbjct: 67 NIQLPNFSKHARSEEIQQKIVKQVEYQLSDMSLLANETLAKHISKDPDGYVPISILSSTK 126
Query: 152 KLARLTHDPDDVVKALRKSKLLEVTEDGTKVRRTVVVQDKPDVDEC---TIYVEKLPPEA 208
K+ L+ + + +V+ALR S L V+ DG +VRR V DK D +E T+ E LP
Sbjct: 127 KVKSLSTNNNFIVQALRSSSRLVVSSDGKRVRRKVPFTDK-DKEELLARTVVAENLPENH 185
Query: 209 EHDYIESVFSKYGKVTYVSL---PKFK---STGKL----KGFAFVEFSTKEEAAKALE 256
H +E +FS G V + + P+ S G+L K A VEF T E A +A+E
Sbjct: 186 SHHNLEKIFSVVGSVKTIRICHPPESNPCCSKGELFVSNKLHALVEFETAELAERAIE 243
>gi|449455334|ref|XP_004145408.1| PREDICTED: uncharacterized protein LOC101207999 [Cucumis sativus]
Length = 423
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 92/178 (51%), Gaps = 16/178 (8%)
Query: 94 DLQRKDGGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCN 151
++Q + R +++ Q+I+ +E+ LSD +L + ++ + + P+ + +S+
Sbjct: 97 NIQLPNFSKHARSEEIQQKIVKQVEYQLSDMSLLANETLAKHISKDPDGYVPISILSSTK 156
Query: 152 KLARLTHDPDDVVKALRKSKLLEVTEDGTKVRRTVVVQDKPDVDEC---TIYVEKLPPEA 208
K+ L+ + + +V+ALR S L V+ DG +VRR V DK D +E T+ E LP
Sbjct: 157 KVKSLSTNNNFIVQALRSSSRLVVSSDGKRVRRKVPFTDK-DKEELLARTVVAENLPENH 215
Query: 209 EHDYIESVFSKYGKVTYVSL---PKFK---STGKL----KGFAFVEFSTKEEAAKALE 256
H +E +FS G V + + P+ S G+L K A VEF T E A +A+E
Sbjct: 216 SHHNLEKIFSVVGSVKTIRICHPPESNPCCSKGELFVSNKLHALVEFETAELAERAIE 273
>gi|443654715|ref|ZP_21131411.1| RNA recognition motiffamily protein [Microcystis aeruginosa
DIANCHI905]
gi|159026915|emb|CAO89166.1| rbpF/A2 [Microcystis aeruginosa PCC 7806]
gi|443333703|gb|ELS48246.1| RNA recognition motiffamily protein [Microcystis aeruginosa
DIANCHI905]
Length = 100
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 40/60 (66%)
Query: 197 CTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
TIYV L E + ++ VF++YG V+ V LP + TGK++GF FVE S+ EE AKA+E
Sbjct: 1 MTIYVGNLVYEVTTNDLQEVFAEYGTVSRVYLPVDRETGKMRGFGFVEMSSDEEEAKAIE 60
>gi|336363922|gb|EGN92290.1| hypothetical protein SERLA73DRAFT_65968 [Serpula lacrymans var.
lacrymans S7.3]
Length = 490
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 74/155 (47%), Gaps = 13/155 (8%)
Query: 117 MEFYLSDSNLRKDRFFSQLLQESPEIEV-----SVFLKCNKLARLTHDPDDVVKALRKSK 171
+EFY +DSNL DRF L + E V S F + A L + KALR S
Sbjct: 50 IEFYFADSNLPFDRFMWTLHTANEEHWVPIKIVSSFTRMRDFAALGVVW--IAKALRTST 107
Query: 172 LLEVTEDGTKVRRTVVVQDKPDVDECTIYVE---KLPPEAEHDYIESVFSKYGKVTYVSL 228
LEV E G VRR VQ+ E ++Y + K PE + +E F++YG V +
Sbjct: 108 ELEVDEAGENVRRRTEVQEPKGQFERSVYAKGFGKEEPELQKK-LEDFFNQYGTANAVRM 166
Query: 229 PKFKSTGKLKGFAFVEFSTKEEAAKALELGLNPCP 263
+ + KG FVE+++ E+A A L +P P
Sbjct: 167 RRVDGKKEFKGSVFVEYASM-ESANAF-LNADPKP 199
>gi|66812892|ref|XP_640625.1| Lupus La protein [Dictyostelium discoideum AX4]
gi|60468640|gb|EAL66643.1| Lupus La protein [Dictyostelium discoideum AX4]
Length = 354
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 74/142 (52%), Gaps = 6/142 (4%)
Query: 112 QIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRK 169
QI+ +E+Y SDSN +D+F ++ + I + V N++ ++ D + +AL+K
Sbjct: 8 QILKQVEYYFSDSNFPRDKFLRSEAAKNVDNYISIDVIASFNRMKTISTDLQLITEALKK 67
Query: 170 SKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYG--KVTYVS 227
S L+V+EDG VRR + + D + T+Y + P + + ++ F+ G KV V
Sbjct: 68 STRLQVSEDGKMVRRLDPLPENIDCGK-TLYSKGWPEDTTIEKVQEFFNANGGYKVVSVR 126
Query: 228 LPKFKSTGKLKGFAFVEFSTKE 249
L K KS KG +F T+E
Sbjct: 127 LRK-KSDKSFKGSFLADFETEE 147
Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
+E+Y SDSN +D+F ++ + I + V N++ ++ D + +AL+KS L+
Sbjct: 13 VEYYFSDSNFPRDKFLRSEAAKNVDNYISIDVIASFNRMKTISTDLQLITEALKKSTRLQ 72
Query: 59 VTEDGTKVK 67
V+EDG V+
Sbjct: 73 VSEDGKMVR 81
>gi|422303993|ref|ZP_16391342.1| putative RNA-binding protein rbpB [Microcystis aeruginosa PCC 9806]
gi|425468337|ref|ZP_18847364.1| putative RNA-binding protein rbpB [Microcystis aeruginosa PCC 9701]
gi|389790955|emb|CCI13203.1| putative RNA-binding protein rbpB [Microcystis aeruginosa PCC 9806]
gi|389885016|emb|CCI34745.1| putative RNA-binding protein rbpB [Microcystis aeruginosa PCC 9701]
Length = 100
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 40/60 (66%)
Query: 197 CTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
TIYV L + D ++ VF++YG V+ V LP + TGK++GF FVE S+ EE AKA+E
Sbjct: 1 MTIYVGNLVYDVTTDDLKEVFAEYGTVSRVYLPVDRETGKMRGFGFVEMSSDEEEAKAIE 60
>gi|166367328|ref|YP_001659601.1| RNA-binding region protein [Microcystis aeruginosa NIES-843]
gi|425440525|ref|ZP_18820825.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9717]
gi|166089701|dbj|BAG04409.1| RNA-binding region protein [Microcystis aeruginosa NIES-843]
gi|389719028|emb|CCH97091.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9717]
Length = 100
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 40/60 (66%)
Query: 197 CTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
TIYV L + D ++ VF++YG V+ V LP + TGK++GF FVE S+ EE AKA+E
Sbjct: 1 MTIYVGNLVYDVTTDDLKEVFAEYGTVSRVYLPVDRETGKMRGFGFVEMSSDEEEAKAIE 60
>gi|158340529|ref|YP_001521523.1| RNA-binding protein [Acaryochloris marina MBIC11017]
gi|158310770|gb|ABW32384.1| RNA-binding protein [Acaryochloris marina MBIC11017]
Length = 91
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 39/60 (65%)
Query: 197 CTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
+IYV L E + + ++FS+YG+VT V LPK + TGKL+GFAFV+ + KA+E
Sbjct: 1 MSIYVGNLSYEVAQEDLRAIFSEYGEVTNVHLPKDRETGKLRGFAFVDLGNDADEVKAIE 60
>gi|239611856|gb|EEQ88843.1| RNA-binding La domain-containing protein [Ajellomyces dermatitidis
ER-3]
Length = 415
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 85/172 (49%), Gaps = 26/172 (15%)
Query: 112 QIMNLMEFYLSDSNLRKDRFFSQLL--QESPEIEVSVFLKCNKLARLTHDP-DDVVKALR 168
+I +EFY SDSNL D+F + E+ +E+S+ ++ R P VV AL+
Sbjct: 148 EIRKQVEFYFSDSNLLMDKFLLSKVGGSENRPVELSLLHSFKRMRRFQ--PFSAVVDALK 205
Query: 169 KSKLLEVTEDGTKVRRTVVVQD--KPDVD------------ECTIYVEKLPPEAEHDY-- 212
SK LE+T+D T VRR V + + K +D + +IY + PE
Sbjct: 206 DSKTLELTDDNTCVRRKVALPETVKESLDPTVVKLFEDKAMDRSIYAKGFGPEEPSTQFD 265
Query: 213 IESVFSKYGKVTYVSLPKFKSTGKL-KGFAFVEFSTKEEAAKALELGLNPCP 263
IE+ F+ YG + L ++ K+ KG FVEF + EE KA L L+P P
Sbjct: 266 IEAFFTPYGPTNAIRL--RRTADKIFKGSVFVEFDS-EETQKAF-LALDPKP 313
Score = 37.0 bits (84), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Query: 1 MEFYLSDSNLRKDRFFSQLL--QESPEIEVSVFLKCNKLARLTHDP-DDVVKALRKSKLL 57
+EFY SDSNL D+F + E+ +E+S+ ++ R P VV AL+ SK L
Sbjct: 153 VEFYFSDSNLLMDKFLLSKVGGSENRPVELSLLHSFKRMRRFQ--PFSAVVDALKDSKTL 210
Query: 58 EVTEDGTKVK 67
E+T+D T V+
Sbjct: 211 ELTDDNTCVR 220
>gi|385303917|gb|EIF47961.1| rna-binding la domain protein [Dekkera bruxellensis AWRI1499]
Length = 303
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 94/182 (51%), Gaps = 15/182 (8%)
Query: 106 KKQLYQQIMNLMEFYLSDSNLRKDRF-FSQLLQESPEIEVSVFLKCNKLARLTHDPDD-V 163
K+ + +I+N +EFY SDSNL DRF F+ + +S+ + ++ + + P + +
Sbjct: 12 KEAVKSKILNQVEFYFSDSNLLNDRFLFTTQQANDGWVPISILSQFQRMKK--YRPIELI 69
Query: 164 VKALRKSK-LLEVTEDGTKVRRTVVV-----QDKPDVDECTIYVEKLPPEAEHDYIESVF 217
V+ALR S+ +LEV++DG VRR V + Q + + + ++ E P +++ D + F
Sbjct: 70 VEALRGSEDVLEVSKDGEMVRRKVPLPTDQNQVQLGIAKRSVVAEPFPKDSKLDDLLEFF 129
Query: 218 SKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNPCPPDYQSSILTTTSRL 277
+ V + + + G VEF +E+A K LE +P P YQ + L S+
Sbjct: 130 RGIAPINQVRMK--RKHKQFTGSVIVEFKKEEDAKKVLE--ADP-KPKYQEAELKIVSKA 184
Query: 278 SF 279
++
Sbjct: 185 AY 186
>gi|225434229|ref|XP_002275950.1| PREDICTED: uncharacterized protein LOC100259405 isoform 1 [Vitis
vinifera]
Length = 454
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 74/170 (43%), Gaps = 21/170 (12%)
Query: 107 KQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVV 164
+++ Q+I+N +E+Y SD NL + + + PE + +SV K+ L +
Sbjct: 134 EEVTQKILNQVEYYFSDVNLATTEHLMRFINKDPEGYVPISVVASFKKIKALVSSHSQLA 193
Query: 165 KALRKSKLLEVTEDGTKVRR--TVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGK 222
LR S L V+EDG KVRR + D ++ + E LP + H + +FS G
Sbjct: 194 TVLRNSTKLVVSEDGKKVRRLHPLTESDMEELQSRIVVAENLPEDHCHQNLMKIFSAVGS 253
Query: 223 VTYVSL--PKFKSTGKLKG---------------FAFVEFSTKEEAAKAL 255
V + P+ + G AFVE+ + E A KA+
Sbjct: 254 VKTIRTCQPQTSNGGASSAARSSKTDNMLFSNKLHAFVEYESIELAEKAV 303
Score = 37.7 bits (86), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
+E+Y SD NL + + + PE + +SV K+ L + LR S L
Sbjct: 144 VEYYFSDVNLATTEHLMRFINKDPEGYVPISVVASFKKIKALVSSHSQLATVLRNSTKLV 203
Query: 59 VTEDGTKVK 67
V+EDG KV+
Sbjct: 204 VSEDGKKVR 212
>gi|425447147|ref|ZP_18827139.1| putative RNA-binding protein rbpB [Microcystis aeruginosa PCC 9443]
gi|389732378|emb|CCI03686.1| putative RNA-binding protein rbpB [Microcystis aeruginosa PCC 9443]
Length = 100
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 39/60 (65%)
Query: 197 CTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
TIYV L E + + VF++YG V V LP ++TGK++GF FVE S+ EE AKA+E
Sbjct: 1 MTIYVGNLVYEVTKEDLHGVFAEYGTVVRVYLPVDQATGKMRGFGFVEMSSDEEEAKAIE 60
>gi|170592461|ref|XP_001900983.1| La domain containing protein [Brugia malayi]
gi|158591050|gb|EDP29663.1| La domain containing protein [Brugia malayi]
Length = 573
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 69/149 (46%), Gaps = 15/149 (10%)
Query: 107 KQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKA 166
+Q+ QQ+ +E+Y S NL DRF + + + + K+ RLT D + VVK
Sbjct: 81 EQIKQQLKAQLEYYFSRENLMTDRFLRCQMDNDQYVPIRIIAGFPKVKRLTSDYNLVVKV 140
Query: 167 LRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYV 226
LR+S ++V E G +VR CTI + ++P + + S+F+ G Y+
Sbjct: 141 LRESSQVQVDEKGQRVRAV--------SKRCTIILREIPESTDEKEVASMFA--GGPPYL 190
Query: 227 SLPKFKSTGKLKGFAFVEFSTKEEAAKAL 255
SL L +V F ++E +A
Sbjct: 191 SL-----QYGLNNSWYVTFESEEATERAF 214
Score = 43.9 bits (102), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 36/68 (52%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEVT 60
+E+Y S NL DRF + + + + K+ RLT D + VVK LR+S ++V
Sbjct: 91 LEYYFSRENLMTDRFLRCQMDNDQYVPIRIIAGFPKVKRLTSDYNLVVKVLRESSQVQVD 150
Query: 61 EDGTKVKG 68
E G +V+
Sbjct: 151 EKGQRVRA 158
>gi|402588959|gb|EJW82892.1| La domain-containing protein, partial [Wuchereria bancrofti]
Length = 580
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 69/149 (46%), Gaps = 15/149 (10%)
Query: 107 KQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKA 166
+Q+ QQ+ +E+Y S NL DRF + + + + K+ RLT D + VVK
Sbjct: 88 EQIKQQLKAQLEYYFSRENLMTDRFLRCQMDNDQYVPIRIIAGFPKVKRLTSDYNLVVKV 147
Query: 167 LRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYV 226
LR+S ++V E G +VR CTI + ++P + + S+F+ G Y+
Sbjct: 148 LRESSQVQVDEKGQRVRAV--------SKRCTIILREIPESTDEKEVASMFA--GGPPYL 197
Query: 227 SLPKFKSTGKLKGFAFVEFSTKEEAAKAL 255
SL L +V F ++E +A
Sbjct: 198 SL-----QYGLNNSWYVTFESEEATERAF 221
Score = 43.9 bits (102), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 36/68 (52%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEVT 60
+E+Y S NL DRF + + + + K+ RLT D + VVK LR+S ++V
Sbjct: 98 LEYYFSRENLMTDRFLRCQMDNDQYVPIRIIAGFPKVKRLTSDYNLVVKVLRESSQVQVD 157
Query: 61 EDGTKVKG 68
E G +V+
Sbjct: 158 EKGQRVRA 165
>gi|158299618|ref|XP_319705.4| AGAP008952-PA [Anopheles gambiae str. PEST]
gi|157013603|gb|EAA14810.4| AGAP008952-PA [Anopheles gambiae str. PEST]
Length = 429
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 82/162 (50%), Gaps = 16/162 (9%)
Query: 113 IMNLMEFYLSDSNLRKDRFFS-QLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK 171
I+ +E+Y D+NL KD+F Q+ ++ + + V L +L L+ D +V A+ KS
Sbjct: 53 IIRQLEYYFGDANLAKDKFMKDQIAKDEGWVPLDVLLTFKRLKSLSEDKKVIVDAIAKSD 112
Query: 172 --LLEVTEDGTKVRR-------TVVVQDKPDVDECTIYVEKLPPEAEHDYIESV--FSKY 220
L+EV+ED K+RR + + + ++ T+YV+ P+ E V F +
Sbjct: 113 EGLVEVSEDREKLRRHPERPLPEMNEERRQEIYARTVYVKGFAPQNGTTMSELVEFFEPF 172
Query: 221 GKVTYVSLPKF--KSTGK--LKGFAFVEFSTKEEAAKALELG 258
KVT + + K+ K T K KG FV F+ KE+ K L G
Sbjct: 173 TKVTNIVMRKYHDKPTKKYLFKGSVFVTFAEKEQCEKFLAQG 214
Score = 40.4 bits (93), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 7/81 (8%)
Query: 1 MEFYLSDSNLRKDRFFS-QLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--LL 57
+E+Y D+NL KD+F Q+ ++ + + V L +L L+ D +V A+ KS L+
Sbjct: 57 LEYYFGDANLAKDKFMKDQIAKDEGWVPLDVLLTFKRLKSLSEDKKVIVDAIAKSDEGLV 116
Query: 58 EVTEDGTKVKGNIIRHFLVPI 78
EV+ED K++ RH P+
Sbjct: 117 EVSEDREKLR----RHPERPL 133
>gi|156551183|ref|XP_001604634.1| PREDICTED: la protein homolog isoform 1 [Nasonia vitripennis]
Length = 414
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 83/161 (51%), Gaps = 17/161 (10%)
Query: 108 QLYQQIMNLMEFYLSDSNLRKDRFF-SQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKA 166
+L +I +EFY D N++KD+F Q + + ++V L LA L+ D + ++ A
Sbjct: 66 ELLTKIKKQVEFYFGDVNMQKDKFLIEQTRLDEGWVPMTVMLNFKILASLSKDIEVILNA 125
Query: 167 LRKSKLLEVTEDGTKVRRTVVVQDKP----------DVDECTIYVEKLPPEAEHDYIESV 216
L S L+E++ED K+RR++ DKP + TIY++ P ++ + ++S
Sbjct: 126 LEDSDLIEISEDRKKIRRSL---DKPLPVYNDEYRKAQEARTIYLKGFPMDSTIEILKSH 182
Query: 217 FSKYGKVTYVSLPKFKSTGK--LKGFAFVEFSTKEEAAKAL 255
F V + + ++K + KG F++F T EAAKA
Sbjct: 183 FETTDDVETIIMRRYKVDKQSFFKGSIFLQFKTL-EAAKAF 222
Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 1 MEFYLSDSNLRKDRFF-SQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEV 59
+EFY D N++KD+F Q + + ++V L LA L+ D + ++ AL S L+E+
Sbjct: 75 VEFYFGDVNMQKDKFLIEQTRLDEGWVPMTVMLNFKILASLSKDIEVILNALEDSDLIEI 134
Query: 60 TEDGTKVK 67
+ED K++
Sbjct: 135 SEDRKKIR 142
>gi|123469031|ref|XP_001317730.1| La domain containing protein [Trichomonas vaginalis G3]
gi|121900471|gb|EAY05507.1| La domain containing protein [Trichomonas vaginalis G3]
Length = 213
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 84/167 (50%), Gaps = 3/167 (1%)
Query: 109 LYQQIMNLMEFYLSDSNLRKDRFFSQLLQE-SPEIEVSVFLKCNKLARLTHDPDDVVKAL 167
+ Q+ + ME+Y ++ NL +D+F + QE S +I V VF+ N++ +L D+V+
Sbjct: 33 VMQRAKDQMEYYFNNFNLERDKFMLRKYQETSNKIPVDVFMTFNQMKKLEISADNVLYVC 92
Query: 168 RKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVS 227
KSK L+V + R + +E ++ + P + + +++V SKY V V
Sbjct: 93 SKSKHLKVDFGAKTISRIEEFKKDYFRNERSLRITGFPLDYTSNDLDAVLSKYDPVWIVP 152
Query: 228 LPKFKSTGK--LKGFAFVEFSTKEEAAKALELGLNPCPPDYQSSILT 272
KF G+ G VEF ++E+ +A++ + + QS IL+
Sbjct: 153 QSKFTENGEKLFNGNVIVEFKSEEDLQEAIKGIKDLNGVELQSEILS 199
Score = 40.8 bits (94), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQE-SPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEV 59
ME+Y ++ NL +D+F + QE S +I V VF+ N++ +L D+V+ KSK L+V
Sbjct: 41 MEYYFNNFNLERDKFMLRKYQETSNKIPVDVFMTFNQMKKLEISADNVLYVCSKSKHLKV 100
>gi|452001822|gb|EMD94281.1| hypothetical protein COCHEDRAFT_1094167 [Cochliobolus
heterostrophus C5]
Length = 501
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 43/67 (64%)
Query: 190 DKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKE 249
DK T+++ L + ++ I+ VF++YG VT VSLP + +G LKGF +V+F ++E
Sbjct: 341 DKRSAPSNTLFIGNLSFDCTNETIQEVFAEYGNVTRVSLPTDRDSGALKGFGYVDFGSQE 400
Query: 250 EAAKALE 256
EA ALE
Sbjct: 401 EATAALE 407
>gi|336270546|ref|XP_003350032.1| hypothetical protein SMAC_00921 [Sordaria macrospora k-hell]
gi|380095423|emb|CCC06896.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 377
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 82/162 (50%), Gaps = 14/162 (8%)
Query: 112 QIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN-KLARLTHDPDDVVKALRKS 170
+I N +EFY SDSNL D+F + VS+ C+ K ++ VV AL++S
Sbjct: 88 KIRNQVEFYFSDSNLPTDKFMWETTGGVENKPVSLKTICSFKRMQMFQPYSAVVAALKES 147
Query: 171 KLLEVT-EDGTK-VRRTVVVQDKPDVDE----CTIYVEKL---PPEAEHDYIESVFSKYG 221
LLEV+ E+G + V+R + + ++YV+ P + D IE+ F+K+G
Sbjct: 148 DLLEVSGEEGQEMVKRKKAYTSSTEAQKARLAASVYVKGFGEETPSTQFD-IEAFFTKFG 206
Query: 222 KVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNPCP 263
+V V L + KG FVEF T+E+A + L+P P
Sbjct: 207 QVNLVKLRR-NEENMFKGSVFVEFKTEEQANNF--VALSPAP 245
>gi|115470171|ref|NP_001058684.1| Os07g0102500 [Oryza sativa Japonica Group]
gi|50508934|dbj|BAD31839.1| putative RNA-binding protein homolog [Oryza sativa Japonica Group]
gi|113610220|dbj|BAF20598.1| Os07g0102500 [Oryza sativa Japonica Group]
gi|215704740|dbj|BAG94768.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215713417|dbj|BAG94554.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218198946|gb|EEC81373.1| hypothetical protein OsI_24577 [Oryza sativa Indica Group]
Length = 438
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 79/163 (48%), Gaps = 15/163 (9%)
Query: 109 LYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKA 166
+ +I+ +E+ SD NL + F +++ + E + +SV K+ L +VKA
Sbjct: 115 MPHKIVKQVEYQFSDINLVANEFLLKIMNKDSEGYVPLSVIASWKKIKSLGATNQMLVKA 174
Query: 167 LRKSKLLEVTEDGTKVRR--TVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVT 224
LR S L V++DG KVRR + K ++ I E LP ++ + +E +F G V
Sbjct: 175 LRTSTKLIVSDDGKKVRRRQPFTEKHKEELQSRMIIAENLPEDSSRNSLEKIFGVVGSVK 234
Query: 225 YVSL--PKFKSTGKL---------KGFAFVEFSTKEEAAKALE 256
+ + P+ ST + K A VE+ + ++A KA+E
Sbjct: 235 NIKMCHPQEPSTARASKSDTLVSNKMHALVEYESSQQAEKAVE 277
>gi|356506138|ref|XP_003521844.1| PREDICTED: uncharacterized protein LOC100801679 isoform 1 [Glycine
max]
Length = 475
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 76/167 (45%), Gaps = 23/167 (13%)
Query: 111 QQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALR 168
Q+I+N +E+Y SD NL + + + PE + +SV K+ L + LR
Sbjct: 160 QKILNQVEYYFSDLNLATTDHLMRFINKDPEGFVPISVVASFKKIKALIASHSQLATVLR 219
Query: 169 KSKLLEVTEDGTKVRRTVVVQDKPDVDEC---TIYVEKLPPEAEHDYIESVFSKYGKV-T 224
S L V+EDG K++R + + D++E + E LP + H + VFS G V T
Sbjct: 220 NSSKLVVSEDGKKIKRQYPLTES-DIEELQSRIVVAENLPEDHCHQNLMKVFSAVGSVKT 278
Query: 225 YVSLPKFKST---------GKLKGF-------AFVEFSTKEEAAKAL 255
+ P S GK+ G AFVE+ + E A +A+
Sbjct: 279 IRTCPPQTSNSGASATSRLGKVDGMPLSNKLHAFVEYGSVELAERAV 325
>gi|327352893|gb|EGE81750.1| RNA-binding La domain-containing protein [Ajellomyces dermatitidis
ATCC 18188]
Length = 455
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 85/172 (49%), Gaps = 26/172 (15%)
Query: 112 QIMNLMEFYLSDSNLRKDRFFSQLL--QESPEIEVSVFLKCNKLARLTHDP-DDVVKALR 168
+I +EFY SDSNL D+F + E+ +E+S+ ++ R P VV AL+
Sbjct: 148 EIRKQVEFYFSDSNLLMDKFLLSKVGGSENRPVELSLLHSFKRMRRFQ--PFSAVVDALK 205
Query: 169 KSKLLEVTEDGTKVRRTVVVQD--KPDVD------------ECTIYVEKLPPEAEHDY-- 212
SK LE+T+D T VRR V + + K +D + +IY + PE
Sbjct: 206 DSKTLELTDDNTCVRRKVALPETVKESLDPTVVKLFEDKAMDRSIYAKGFGPEEPSTQFD 265
Query: 213 IESVFSKYGKVTYVSLPKFKSTGKL-KGFAFVEFSTKEEAAKALELGLNPCP 263
IE+ F+ YG + L ++ K+ KG FVEF + EE KA L L+P P
Sbjct: 266 IEAFFTPYGPTNAIRL--RRTADKIFKGSVFVEFDS-EETQKAF-LALDPKP 313
>gi|158339748|ref|YP_001520755.1| RNA-binding protein [Acaryochloris marina MBIC11017]
gi|158340644|ref|YP_001521812.1| RNA-binding protein [Acaryochloris marina MBIC11017]
gi|158309989|gb|ABW31605.1| RNA-binding protein [Acaryochloris marina MBIC11017]
gi|158310885|gb|ABW32498.1| RNA-binding protein [Acaryochloris marina MBIC11017]
Length = 95
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 26/59 (44%), Positives = 40/59 (67%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
+IYV L + D I++VF++YG V+ V +PK + TG+++GFAFVE E +KA+E
Sbjct: 2 SIYVGNLSYDVTQDEIQAVFAEYGAVSNVHVPKDRETGRMRGFAFVELGNDAEESKAIE 60
>gi|327275638|ref|XP_003222580.1| PREDICTED: la-related protein 6-like [Anolis carolinensis]
Length = 486
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 88/193 (45%), Gaps = 49/193 (25%)
Query: 108 QLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN--KLARLTHDPDDVVK 165
QL ++I++ +EFYLSD NL KD F + +Q++ VS+ L + K+ LT D +
Sbjct: 80 QLVRRIVSQVEFYLSDENLSKDAFLLKHVQKNKMGYVSIKLLTSFKKVKYLTRDWRVTLY 139
Query: 166 ALRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEH--------------- 210
AL+ S+LLEV E+GTKVRR + D Y+ +PP
Sbjct: 140 ALQFSELLEVNEEGTKVRRRKPIPD---------YLVNIPPSKMLLAWNLLPYEQTIPAS 190
Query: 211 --------DYIESVFSKYGKVTYVSL--PKFKSTGKLKGF------------AFVEFSTK 248
D I +F +G ++ + + P K +K + A VE+ +
Sbjct: 191 LLFQTTFLDKITKLFGPFGDISSIRILRPGKKLPSDVKKYSLRYPELLTKCCALVEYESL 250
Query: 249 EEAAKAL-ELGLN 260
E A KAL ELG N
Sbjct: 251 ESARKALEELGHN 263
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN--KLARLTHDPDDVVKALRKSKLLE 58
+EFYLSD NL KD F + +Q++ VS+ L + K+ LT D + AL+ S+LLE
Sbjct: 89 VEFYLSDENLSKDAFLLKHVQKNKMGYVSIKLLTSFKKVKYLTRDWRVTLYALQFSELLE 148
Query: 59 VTEDGTKVK 67
V E+GTKV+
Sbjct: 149 VNEEGTKVR 157
>gi|409075004|gb|EKM75390.1| hypothetical protein AGABI1DRAFT_116412 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 487
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 70/140 (50%), Gaps = 6/140 (4%)
Query: 112 QIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDD-VVKALR 168
+ M +EFY +D+NL D+F L ++PE + V ++ + D +++AL
Sbjct: 28 RAMRQVEFYFADANLPFDKFMWTLHSKTPEHWVPVKTVASFKRMREFQSEGIDWLLQALE 87
Query: 169 KSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAE--HDYIESVFSKYGKVTYV 226
S LEV E T +RRT V++ + E +IY + E +E F+KYG+ V
Sbjct: 88 DSTFLEVDESKTNIRRTTEVEEPKNQFERSIYAKGFGEEEPTLQTRMEDFFNKYGRTNAV 147
Query: 227 SLPKFKSTGKLKGFAFVEFS 246
+ + + + KG FVEF+
Sbjct: 148 RMRRDEKK-QFKGSVFVEFA 166
>gi|225558254|gb|EEH06538.1| RNA-binding La domain-containing protein [Ajellomyces capsulatus
G186AR]
Length = 464
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 82/171 (47%), Gaps = 24/171 (14%)
Query: 112 QIMNLMEFYLSDSNLRKDRFFSQLL--QESPEIEVSVFLKCNKLARLTHDP-DDVVKALR 168
+I +EFY SDSNL D+F + E+ +E+S+ +++R P VV AL+
Sbjct: 151 EIRKQVEFYFSDSNLLMDKFLLSKVGGSENRPVELSLLHSFKRMSRFQ--PFSAVVDALK 208
Query: 169 KSKLLEVTEDGTKVRRTVVVQD--KPDVDEC------------TIYVEKLPPEAEHDY-- 212
SK LE+T+D T VRR V + + K +D +IY + PE
Sbjct: 209 DSKTLELTDDDTCVRRKVALPETVKESLDPTVVKVFEDKAMHRSIYAKGFGPEEPSTQFD 268
Query: 213 IESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNPCP 263
IE+ F+ YG + L + + KG FVEF + EE KA L L P P
Sbjct: 269 IEAFFTPYGPTNAIRL-RRTAEKIFKGSVFVEFDS-EETQKAF-LALEPKP 316
Score = 37.7 bits (86), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 41/70 (58%), Gaps = 5/70 (7%)
Query: 1 MEFYLSDSNLRKDRFFSQLL--QESPEIEVSVFLKCNKLARLTHDP-DDVVKALRKSKLL 57
+EFY SDSNL D+F + E+ +E+S+ +++R P VV AL+ SK L
Sbjct: 156 VEFYFSDSNLLMDKFLLSKVGGSENRPVELSLLHSFKRMSRFQ--PFSAVVDALKDSKTL 213
Query: 58 EVTEDGTKVK 67
E+T+D T V+
Sbjct: 214 ELTDDDTCVR 223
>gi|451850002|gb|EMD63305.1| hypothetical protein COCSADRAFT_161812 [Cochliobolus sativus
ND90Pr]
Length = 489
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 43/67 (64%)
Query: 190 DKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKE 249
DK T+++ L + ++ I+ VF++YG VT VSLP + +G LKGF +V+F ++E
Sbjct: 328 DKRSAPSNTLFIGNLSFDCTNETIQEVFAEYGNVTRVSLPTDRDSGALKGFGYVDFGSQE 387
Query: 250 EAAKALE 256
EA ALE
Sbjct: 388 EATAALE 394
>gi|325094028|gb|EGC47338.1| RNA-binding La domain-containing protein [Ajellomyces capsulatus
H88]
Length = 470
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 81/171 (47%), Gaps = 24/171 (14%)
Query: 112 QIMNLMEFYLSDSNLRKDRFFSQLL--QESPEIEVSVFLKCNKLARLTHDP-DDVVKALR 168
+I +EFY SDSNL D+F + E+ +E+S+ ++ R P VV AL+
Sbjct: 151 EIRKQVEFYFSDSNLLTDKFLLSKVGGSENRPVELSLLHSFKRMGRFQ--PFSAVVDALK 208
Query: 169 KSKLLEVTEDGTKVRRTVVVQD--KPDVDEC------------TIYVEKLPPEAEHDY-- 212
SK LE+T+D T VRR V + + K +D +IY + PE
Sbjct: 209 DSKTLELTDDDTCVRRKVALPETVKESLDPTVVKVFEDKAMHRSIYAKGFGPEEPSTQFD 268
Query: 213 IESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNPCP 263
IE+ F+ YG + L + + KG FVEF + EE KA L L P P
Sbjct: 269 IEAFFTPYGPTNAIRL-RRTAEKIFKGSVFVEFDS-EETQKAF-LALEPKP 316
Score = 37.7 bits (86), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Query: 1 MEFYLSDSNLRKDRFFSQLL--QESPEIEVSVFLKCNKLARLTHDP-DDVVKALRKSKLL 57
+EFY SDSNL D+F + E+ +E+S+ ++ R P VV AL+ SK L
Sbjct: 156 VEFYFSDSNLLTDKFLLSKVGGSENRPVELSLLHSFKRMGRFQ--PFSAVVDALKDSKTL 213
Query: 58 EVTEDGTKVK 67
E+T+D T V+
Sbjct: 214 ELTDDDTCVR 223
>gi|3287869|sp|Q26457.1|LA_AEDAL RecName: Full=La protein homolog; AltName: Full=La autoantigen
homolog; AltName: Full=La ribonucleoprotein
gi|1311676|gb|AAB35931.1| La autoantigen homolog [Aedes albopictus]
Length = 383
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 82/164 (50%), Gaps = 16/164 (9%)
Query: 108 QLYQQIMNLMEFYLSDSNLRKDRFFS-QLLQESPEIEVSVFLKCNKLARLTHDPDDVVKA 166
+L + +E+Y D+NL +D+F Q+ ++ + V V L +L L+ D +V A
Sbjct: 42 KLEASTIRQLEYYFGDANLARDKFLQEQISKDEGWVPVDVLLTFKRLKSLSEDKKVIVDA 101
Query: 167 LRKSK--LLEVTEDGTKVRR-------TVVVQDKPDVDECTIYVEKLPPEAEHDYIE--S 215
+ KS L+EV+ED K+RR + + ++ T+YV+ PE E
Sbjct: 102 IEKSDEGLIEVSEDREKLRRHPERPLPEQNEETRKEIYGRTVYVKGFAPEEGTQMSELLE 161
Query: 216 VFSKYGKVTYVSLPKF--KSTGK--LKGFAFVEFSTKEEAAKAL 255
F + K+T + + K+ K+T K KG FV F+TK+ A+ L
Sbjct: 162 FFEPFEKITNIVMRKYHDKATKKYLFKGSVFVTFATKDHCAEFL 205
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 7/88 (7%)
Query: 1 MEFYLSDSNLRKDRFFS-QLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--LL 57
+E+Y D+NL +D+F Q+ ++ + V V L +L L+ D +V A+ KS L+
Sbjct: 51 LEYYFGDANLARDKFLQEQISKDEGWVPVDVLLTFKRLKSLSEDKKVIVDAIEKSDEGLI 110
Query: 58 EVTEDGTKVKGNIIRHFLVPISMETEAS 85
EV+ED K++ RH P+ + E +
Sbjct: 111 EVSEDREKLR----RHPERPLPEQNEET 134
>gi|425434339|ref|ZP_18814808.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9432]
gi|425450077|ref|ZP_18829909.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 7941]
gi|440751641|ref|ZP_20930844.1| RNA recognition motif family protein [Microcystis aeruginosa
TAIHU98]
gi|389676192|emb|CCH94745.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9432]
gi|389769258|emb|CCI05857.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 7941]
gi|440176134|gb|ELP55407.1| RNA recognition motif family protein [Microcystis aeruginosa
TAIHU98]
Length = 97
Score = 58.2 bits (139), Expect = 5e-06, Method: Composition-based stats.
Identities = 29/58 (50%), Positives = 37/58 (63%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKAL 255
+IYV LP E + D + VF +YGK+ V LP + TGK +GFAFVE T EE KA+
Sbjct: 2 SIYVGNLPFEVDQDDVVEVFKEYGKIKRVHLPMDRETGKKRGFAFVEMETPEEETKAI 59
>gi|357119607|ref|XP_003561527.1| PREDICTED: uncharacterized protein LOC100837225 [Brachypodium
distachyon]
Length = 469
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 79/163 (48%), Gaps = 15/163 (9%)
Query: 109 LYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKA 166
+ +I+ +E+ SD NL + F +++ + E + +SV K+ L +VKA
Sbjct: 135 IAHKIVKQVEYQFSDINLVANEFLLKIMNKDSEGYVPLSVISSWKKIKSLGATNQMLVKA 194
Query: 167 LRKSKLLEVTEDGTKVRR--TVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVT 224
LR S L V++DG KVRR + K ++ I E LP ++ + +E VF G V
Sbjct: 195 LRTSTKLIVSDDGKKVRRRQPFTEKHKEELQSRMIIAENLPEDSSRNSLEKVFGVVGSVK 254
Query: 225 YVSL--PKFKSTGKL---------KGFAFVEFSTKEEAAKALE 256
+ + P+ S+ + K A VE+ T ++A KA+E
Sbjct: 255 NIKICHPQEPSSARASKSDTLVSNKMHALVEYETSQQAEKAVE 297
>gi|345489431|ref|XP_003426137.1| PREDICTED: la protein homolog isoform 2 [Nasonia vitripennis]
Length = 380
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 83/161 (51%), Gaps = 17/161 (10%)
Query: 108 QLYQQIMNLMEFYLSDSNLRKDRFF-SQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKA 166
+L +I +EFY D N++KD+F Q + + ++V L LA L+ D + ++ A
Sbjct: 66 ELLTKIKKQVEFYFGDVNMQKDKFLIEQTRLDEGWVPMTVMLNFKILASLSKDIEVILNA 125
Query: 167 LRKSKLLEVTEDGTKVRRTVVVQDKP----------DVDECTIYVEKLPPEAEHDYIESV 216
L S L+E++ED K+RR++ DKP + TIY++ P ++ + ++S
Sbjct: 126 LEDSDLIEISEDRKKIRRSL---DKPLPVYNDEYRKAQEARTIYLKGFPMDSTIEILKSH 182
Query: 217 FSKYGKVTYVSLPKFKSTGK--LKGFAFVEFSTKEEAAKAL 255
F V + + ++K + KG F++F T EAAKA
Sbjct: 183 FETTDDVETIIMRRYKVDKQSFFKGSIFLQFKTL-EAAKAF 222
Score = 41.2 bits (95), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 1 MEFYLSDSNLRKDRFF-SQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEV 59
+EFY D N++KD+F Q + + ++V L LA L+ D + ++ AL S L+E+
Sbjct: 75 VEFYFGDVNMQKDKFLIEQTRLDEGWVPMTVMLNFKILASLSKDIEVILNALEDSDLIEI 134
Query: 60 TEDGTKVKGNI 70
+ED K++ ++
Sbjct: 135 SEDRKKIRRSL 145
>gi|268564021|ref|XP_002638994.1| Hypothetical protein CBG22240 [Caenorhabditis briggsae]
Length = 394
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 78/152 (51%), Gaps = 11/152 (7%)
Query: 111 QQIMNLMEFYLSDSNLRKDRFFSQLLQESPE-IEVSVFLKCNKLARLTHDPDDVVKALRK 169
Q+IM +E+Y + NL +D+F + ++E + ++ L N+LA ++ D D + A++
Sbjct: 16 QKIMKQLEYYFGNINLPRDKFLQEKIKEDDGWVPITTMLNFNRLAAISKDTDKIAAAVKA 75
Query: 170 SK--LLEVTEDGTKVRRTV-------VVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKY 220
S ++ ++ED TK+RR ++ + T+Y++ + + D I +++
Sbjct: 76 SGSDVVVISEDNTKIRRNTENPTPENSLEYWQKIKHRTVYMKGFNTDTQLDDIIKWANQF 135
Query: 221 GKVTYVSLPKFKSTGK-LKGFAFVEFSTKEEA 251
G+ + + + K + KG F + T+EEA
Sbjct: 136 GETENILMRRTKPGDRTFKGSVFATYKTREEA 167
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE-IEVSVFLKCNKLARLTHDPDDVVKALRKSK--LL 57
+E+Y + NL +D+F + ++E + ++ L N+LA ++ D D + A++ S ++
Sbjct: 22 LEYYFGNINLPRDKFLQEKIKEDDGWVPITTMLNFNRLAAISKDTDKIAAAVKASGSDVV 81
Query: 58 EVTEDGTKVKGN 69
++ED TK++ N
Sbjct: 82 VISEDNTKIRRN 93
>gi|440793396|gb|ELR14581.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 964
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 43/73 (58%)
Query: 184 RTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFV 243
RT+ KP+ + + + LP +A + F+ +GK+ V +PK K TG +GF FV
Sbjct: 272 RTISASFKPEKRDGRLIIRNLPFQATEADLSEKFAAHGKLVDVIIPKNKETGNPRGFGFV 331
Query: 244 EFSTKEEAAKALE 256
EF TKEEAA ALE
Sbjct: 332 EFFTKEEAANALE 344
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 33/55 (60%)
Query: 197 CTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEA 251
T+++ LP A + + F+++G++ Y +L K K TG +G AF++F+ K A
Sbjct: 492 TTLFIRNLPFGATVQDLRAKFAEFGRIRYCALVKDKVTGMARGSAFLQFAEKASA 546
>gi|308498307|ref|XP_003111340.1| hypothetical protein CRE_03683 [Caenorhabditis remanei]
gi|308240888|gb|EFO84840.1| hypothetical protein CRE_03683 [Caenorhabditis remanei]
Length = 401
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 79/154 (51%), Gaps = 11/154 (7%)
Query: 112 QIMNLMEFYLSDSNLRKDRFFSQLLQESPE-IEVSVFLKCNKLARLTHDPDDVVKALRK- 169
+I+ +E+Y + NL +D+F + ++E + ++ L N+LA ++ D D + A++
Sbjct: 15 KIIKQLEYYFGNINLPRDKFLQEKIKEDDGWVPITTMLNFNRLAAISKDTDKIANAIKSS 74
Query: 170 -SKLLEVTEDGTKVRRTV-------VVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYG 221
S+++ V+ED K+RR ++ + T+Y++ + + D I +++G
Sbjct: 75 GSEIVTVSEDNQKIRRNAENPVPENSLEYWQKIKHRTVYMKGFNTDTQLDDIIQWANQFG 134
Query: 222 KVTYVSLPKFKSTGK-LKGFAFVEFSTKEEAAKA 254
+ V + + K + KG F+ + T+EEA A
Sbjct: 135 ETENVLMRRLKPGDRTFKGSVFITYKTREEAEAA 168
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE-IEVSVFLKCNKLARLTHDPDDVVKALRK--SKLL 57
+E+Y + NL +D+F + ++E + ++ L N+LA ++ D D + A++ S+++
Sbjct: 20 LEYYFGNINLPRDKFLQEKIKEDDGWVPITTMLNFNRLAAISKDTDKIANAIKSSGSEIV 79
Query: 58 EVTEDGTKVKGN 69
V+ED K++ N
Sbjct: 80 TVSEDNQKIRRN 91
>gi|189203851|ref|XP_001938261.1| nuclear localization sequence-binding protein [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187985360|gb|EDU50848.1| nuclear localization sequence-binding protein [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 475
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 44/67 (65%)
Query: 190 DKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKE 249
DK T+++ + E ++ I+ VF++YG +T VSLP + TG LKGF +V+FS+++
Sbjct: 316 DKRSPPSNTLFLGNVSFECSNESIQEVFAEYGSITRVSLPTDRDTGALKGFGYVDFSSQQ 375
Query: 250 EAAKALE 256
EA ALE
Sbjct: 376 EATAALE 382
>gi|425461447|ref|ZP_18840925.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9808]
gi|389825682|emb|CCI24355.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9808]
Length = 97
Score = 57.8 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 29/58 (50%), Positives = 37/58 (63%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKAL 255
+IYV LP E + D + VF +YGK+ V LP + TGK +GFAFVE T EE KA+
Sbjct: 2 SIYVGNLPFEVDQDDVVEVFKEYGKIKRVHLPMDRETGKKRGFAFVEMETPEEETKAI 59
>gi|425434353|ref|ZP_18814822.1| putative RNA-binding protein rbpA [Microcystis aeruginosa PCC 9432]
gi|425450092|ref|ZP_18829924.1| putative RNA-binding protein rbpA [Microcystis aeruginosa PCC 7941]
gi|389676152|emb|CCH94759.1| putative RNA-binding protein rbpA [Microcystis aeruginosa PCC 9432]
gi|389769241|emb|CCI05872.1| putative RNA-binding protein rbpA [Microcystis aeruginosa PCC 7941]
Length = 100
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 40/60 (66%)
Query: 197 CTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
TIYV L + + ++ VF++YG V+ V LP + TGK++GF FVE S+ EE AKA+E
Sbjct: 1 MTIYVGNLVYDVTTNDLQEVFAEYGTVSRVYLPVDRETGKMRGFGFVEMSSDEEEAKAIE 60
>gi|356573306|ref|XP_003554803.1| PREDICTED: uncharacterized protein LOC100813426 isoform 1 [Glycine
max]
Length = 467
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 76/167 (45%), Gaps = 23/167 (13%)
Query: 111 QQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALR 168
Q+I+N +E+Y SD NL + + + PE + +SV K+ L + LR
Sbjct: 152 QKILNQVEYYFSDLNLATTDHLMRFVNKDPEGFVPISVVASFKKIKALIASHSQLATVLR 211
Query: 169 KSKLLEVTEDGTKVRRTVVVQDKPDVDEC---TIYVEKLPPEAEHDYIESVFSKYGKV-T 224
S L V+EDG K++R + + D++E + E LP + H + VFS G V T
Sbjct: 212 NSSKLVVSEDGKKIKRQYPLTES-DIEEIQSRIVVAENLPEDHCHQNLMKVFSAVGSVKT 270
Query: 225 YVSLPKFKST---------GKLKGF-------AFVEFSTKEEAAKAL 255
+ P S GK+ G AFVE+ + E A +A+
Sbjct: 271 IRTCPPQTSNSGASSASRLGKVDGMPLSNKLHAFVEYESVELAERAV 317
>gi|307169741|gb|EFN62299.1| La protein-like protein [Camponotus floridanus]
Length = 413
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 80/155 (51%), Gaps = 15/155 (9%)
Query: 107 KQLYQQIMNLMEFYLSDSNLRKDRFF-SQLLQESPEIEVSVFLKCNKLARLTHDPDDVVK 165
K+L ++I + +E+Y + N+++D+F Q + I ++V L LA L+ + D ++K
Sbjct: 84 KELLEKIKDQIEYYFGNVNMQRDKFLIEQTKLDEGWIPMTVMLNFKLLANLSKNIDIILK 143
Query: 166 ALRKSKLLEVTEDGTKVRRTVVVQDKPDVDE--------CTIYVEKLP-PEAEHDYIESV 216
AL S L+E++ED K+RR+ P+ +E T+YV+ P + D ++
Sbjct: 144 ALESSDLIEISEDRKKIRRSPNYP-LPEYNEEYRKAQEARTVYVKGFPLTDTNIDKLKKF 202
Query: 217 FSKYGKVTYVSLPKFKSTG----KLKGFAFVEFST 247
F+ Y + + K++ K KG FV+F T
Sbjct: 203 FNPYKPFETIVMRKYQDNKDKVYKFKGSVFVQFET 237
Score = 41.6 bits (96), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 1 MEFYLSDSNLRKDRFF-SQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEV 59
+E+Y + N+++D+F Q + I ++V L LA L+ + D ++KAL S L+E+
Sbjct: 94 IEYYFGNVNMQRDKFLIEQTKLDEGWIPMTVMLNFKLLANLSKNIDIILKALESSDLIEI 153
Query: 60 TEDGTKVK 67
+ED K++
Sbjct: 154 SEDRKKIR 161
>gi|426193576|gb|EKV43509.1| hypothetical protein AGABI2DRAFT_195118 [Agaricus bisporus var.
bisporus H97]
Length = 487
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 70/140 (50%), Gaps = 6/140 (4%)
Query: 112 QIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDD-VVKALR 168
+ M +EFY +D+NL D+F L ++PE + + ++ + D +++AL+
Sbjct: 28 RAMRQVEFYFADANLPFDKFMWTLHSKTPEHWVPIKTVASFKRMREFQSEGIDWLLQALQ 87
Query: 169 KSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAE--HDYIESVFSKYGKVTYV 226
S LEV E T +RRT V++ + E +IY + E +E F KYG+ V
Sbjct: 88 DSTFLEVDESKTNIRRTTEVEEPKNQFERSIYAKGFGEEEPTLQTRMEDFFDKYGRTNAV 147
Query: 227 SLPKFKSTGKLKGFAFVEFS 246
+ + + + KG FVEF+
Sbjct: 148 RMRRDEKK-QFKGSVFVEFA 166
>gi|194879018|ref|XP_001974159.1| GG21576 [Drosophila erecta]
gi|190657346|gb|EDV54559.1| GG21576 [Drosophila erecta]
Length = 390
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 81/159 (50%), Gaps = 15/159 (9%)
Query: 113 IMNLMEFYLSDSNLRKDRFFSQLL--QESPEIEVSVFLKCNKLARLTHDPDDVVKALRKS 170
I+ +E+Y D+NL +D+F + + E + +SV + +LA L+ D ++V AL KS
Sbjct: 54 IIRQVEYYFGDANLNRDKFLREQIGKNEDGWVPLSVLVTFKRLASLSTDLTEIVAALNKS 113
Query: 171 K--LLEVTEDGTKVRR-------TVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYG 221
+ L+E++ED +RR + + ++ E T Y + P +++ + + Y
Sbjct: 114 EEGLVEISEDKLSLRRHPERPIPEHNEERRKEIQERTAYAKGFPLDSQISELLDFAANYD 173
Query: 222 KVTYVSLPKF----KSTGKLKGFAFVEFSTKEEAAKALE 256
KV +++ K + K KG F+ F TKE+A LE
Sbjct: 174 KVVNLTMRKHYDKPTKSYKFKGSIFLTFETKEQAKAFLE 212
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 8/87 (9%)
Query: 1 MEFYLSDSNLRKDRFFSQLL--QESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--L 56
+E+Y D+NL +D+F + + E + +SV + +LA L+ D ++V AL KS+ L
Sbjct: 58 VEYYFGDANLNRDKFLREQIGKNEDGWVPLSVLVTFKRLASLSTDLTEIVAALNKSEEGL 117
Query: 57 LEVTEDGTKVKGNIIRHFLVPISMETE 83
+E++ED K ++ RH PI E
Sbjct: 118 VEISED----KLSLRRHPERPIPEHNE 140
>gi|358387438|gb|EHK25033.1| hypothetical protein TRIVIDRAFT_54648 [Trichoderma virens Gv29-8]
Length = 1024
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 199 IYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKA 254
++V L P A D I +FSKYG ++ +++P+ +GK +GFAFV+F+TK+EA KA
Sbjct: 760 VHVSGLSPSATEDEIREIFSKYGTISRINVPR-NISGKGRGFAFVDFATKDEAEKA 814
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Query: 190 DKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKE 249
D + TIYV PP A+ YI +F G + + P K + F +V F E
Sbjct: 660 DVQSAHDLTIYVTNYPPAADEKYIRRLFKDCGDILSIRWPSLK-VNTHRRFCYVSFRDSE 718
Query: 250 EAAKAL 255
+A+A+
Sbjct: 719 ASARAV 724
>gi|330928516|ref|XP_003302299.1| hypothetical protein PTT_14050 [Pyrenophora teres f. teres 0-1]
gi|311322459|gb|EFQ89618.1| hypothetical protein PTT_14050 [Pyrenophora teres f. teres 0-1]
Length = 403
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 42/60 (70%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALEL 257
T+++ + E ++ I+ VF++YG +T VSLP + TG LKGF +V+FS+++EA ALE
Sbjct: 320 TLFLGNVSFECSNESIQEVFAEYGSITRVSLPTDRDTGALKGFGYVDFSSQQEATAALEA 379
Score = 37.0 bits (84), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 31/57 (54%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKA 254
++V + + D++ F +G++ + + TG+ KGF +VEFS +AAKA
Sbjct: 218 NLFVGNMSWNIDEDWLRREFEGFGEIVGCRVITDRETGRAKGFGYVEFSNAADAAKA 274
>gi|341883191|gb|EGT39126.1| hypothetical protein CAEBREN_25521 [Caenorhabditis brenneri]
Length = 421
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 80/154 (51%), Gaps = 11/154 (7%)
Query: 112 QIMNLMEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKALR-- 168
+IM +E+Y + NL +D+F + ++ + + ++ L N+LA ++ D + + A++
Sbjct: 40 KIMRQLEYYFGNINLPRDKFLQEQIKIDDGWVPITTMLNFNRLAAISKDVEKIASAIKAS 99
Query: 169 KSKLLEVTEDGTKVRRTV-------VVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYG 221
KS+++ ++ED K+RR ++ + T+Y++ + + D I +++G
Sbjct: 100 KSEIITISEDNQKIRRNAENPVPENSLEYWQKIKHRTVYMKGFNTDTQLDDIIQWANQFG 159
Query: 222 KVTYVSLPKFKSTGK-LKGFAFVEFSTKEEAAKA 254
+ V + + K + KG F+ + T+EEA A
Sbjct: 160 ETENVLMRRLKPGDRTFKGSVFITYKTREEAEAA 193
Score = 40.4 bits (93), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 44/72 (61%), Gaps = 3/72 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKALR--KSKLL 57
+E+Y + NL +D+F + ++ + + ++ L N+LA ++ D + + A++ KS+++
Sbjct: 45 LEYYFGNINLPRDKFLQEQIKIDDGWVPITTMLNFNRLAAISKDVEKIASAIKASKSEII 104
Query: 58 EVTEDGTKVKGN 69
++ED K++ N
Sbjct: 105 TISEDNQKIRRN 116
>gi|209489211|gb|ACI48996.1| hypothetical protein Cbre_JD01.003 [Caenorhabditis brenneri]
Length = 422
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 80/154 (51%), Gaps = 11/154 (7%)
Query: 112 QIMNLMEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKALR-- 168
+IM +E+Y + NL +D+F + ++ + + ++ L N+LA ++ D + + A++
Sbjct: 41 KIMRQLEYYFGNINLPRDKFLQEQIKIDDGWVPITTMLNFNRLAAISKDVEKIASAIKAS 100
Query: 169 KSKLLEVTEDGTKVRRTV-------VVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYG 221
KS+++ ++ED K+RR ++ + T+Y++ + + D I +++G
Sbjct: 101 KSEIITISEDNQKIRRNAENPVPENSLEYWQKIKHRTVYMKGFNTDTQLDDIIQWANQFG 160
Query: 222 KVTYVSLPKFKSTGK-LKGFAFVEFSTKEEAAKA 254
+ V + + K + KG F+ + T+EEA A
Sbjct: 161 ETENVLMRRLKPGDRTFKGSVFITYKTREEAEAA 194
Score = 40.8 bits (94), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 44/72 (61%), Gaps = 3/72 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKALR--KSKLL 57
+E+Y + NL +D+F + ++ + + ++ L N+LA ++ D + + A++ KS+++
Sbjct: 46 LEYYFGNINLPRDKFLQEQIKIDDGWVPITTMLNFNRLAAISKDVEKIASAIKASKSEII 105
Query: 58 EVTEDGTKVKGN 69
++ED K++ N
Sbjct: 106 TISEDNQKIRRN 117
>gi|195356381|ref|XP_002044652.1| GM22404 [Drosophila sechellia]
gi|194133233|gb|EDW54749.1| GM22404 [Drosophila sechellia]
Length = 113
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 36/59 (61%)
Query: 98 KDGGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARL 156
K GGR RK+ L+ I MEFY D+NL KDRF + +++ P + + +FL N++ L
Sbjct: 48 KKDGGRKRKRHLFNSIRGQMEFYFGDANLSKDRFLRRYVEQDPYVPLEIFLTFNRIRTL 106
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 26/40 (65%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARL 40
MEFY D+NL KDRF + +++ P + + +FL N++ L
Sbjct: 67 MEFYFGDANLSKDRFLRRYVEQDPYVPLEIFLTFNRIRTL 106
>gi|366999218|ref|XP_003684345.1| hypothetical protein TPHA_0B02380 [Tetrapisispora phaffii CBS 4417]
gi|357522641|emb|CCE61911.1| hypothetical protein TPHA_0B02380 [Tetrapisispora phaffii CBS 4417]
Length = 259
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 78/163 (47%), Gaps = 18/163 (11%)
Query: 108 QLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE-IEVSVFLKCNKLARLTHDP-DDVVK 165
++ +Q + +EFY S+ N D+F +++ + +S N++ + + P D V++
Sbjct: 27 EVSKQCLKQLEFYFSEFNFPYDKFLRTTAEKNDGWVPISTIATFNRMKK--YRPVDKVIE 84
Query: 166 ALRKSKLLEVTEDGTKVRRTVVV------QDKPDVDECTIYVEKLPPEAEH-------DY 212
AL S++LEV+EDG RR V + + + T+ + P + EH +
Sbjct: 85 ALHASEILEVSEDGENTRRRVPLDLSATRNARIEQSRRTLAIMNFPTDKEHEKITDAQEK 144
Query: 213 IESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKAL 255
IES F K V V L + + G VEF T+EEA K L
Sbjct: 145 IESFFHKLATVNQVRLRRAQRKN-FSGTVLVEFKTQEEADKFL 186
>gi|434396627|ref|YP_007130631.1| RNP-1 like RNA-binding protein [Stanieria cyanosphaera PCC 7437]
gi|428267724|gb|AFZ33665.1| RNP-1 like RNA-binding protein [Stanieria cyanosphaera PCC 7437]
Length = 102
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 39/60 (65%)
Query: 197 CTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
+IYV +P E + + S+F++YG VT V LP + TG+++GF FVE S + E +A+E
Sbjct: 1 MSIYVGNIPYEVTQEDLSSIFAEYGTVTRVYLPVDRETGRMRGFGFVEMSNETEEDQAIE 60
>gi|390437867|ref|ZP_10226380.1| putative RNA-binding protein rbpF [Microcystis sp. T1-4]
gi|389838700|emb|CCI30504.1| putative RNA-binding protein rbpF [Microcystis sp. T1-4]
Length = 100
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 38/60 (63%)
Query: 197 CTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
TIYV L E + + VF++YG V V LP + TGK++GF FVE S+ EE AKA+E
Sbjct: 1 MTIYVGNLVYEVTKEDLHDVFAEYGTVIRVYLPVDRETGKMRGFGFVEMSSDEEEAKAIE 60
>gi|443896888|dbj|GAC74231.1| FOG: RRM domain [Pseudozyma antarctica T-34]
Length = 477
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 74/151 (49%), Gaps = 13/151 (8%)
Query: 112 QIMNLMEFYLSDSNLRKDRFFSQLLQESPE-----IEVSVFLKCNKLARLTHDPDDVVKA 166
+ + +EFY DSNL D+F L ++ PE ++ F + + + + D + +
Sbjct: 42 EALRQVEFYFHDSNLPYDKFLFTLTRKDPEGWVPIATIASFKRMRAIQEILGN-DGIAEV 100
Query: 167 LRKS-KLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAE--HDYIESVFSKYGKV 223
LR S +LL+V+EDG VRR + D + +IY + E E +E+ F+K+GKV
Sbjct: 101 LRNSEELLDVSEDGANVRRRKELVPVKDAFDRSIYAKGFGDETETLQKDLETFFTKFGKV 160
Query: 224 TYVSLPKFKSTGK----LKGFAFVEFSTKEE 250
V + + KG FVEF+ E+
Sbjct: 161 NSVRMRRDMDANTKPKPFKGSVFVEFADMED 191
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 10/84 (11%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE-----IEVSVFLKCNKLARLTHDPDDVVKALRKS- 54
+EFY DSNL D+F L ++ PE ++ F + + + + D + + LR S
Sbjct: 47 VEFYFHDSNLPYDKFLFTLTRKDPEGWVPIATIASFKRMRAIQEILGN-DGIAEVLRNSE 105
Query: 55 KLLEVTEDGTKVKGNIIRHFLVPI 78
+LL+V+EDG V+ R LVP+
Sbjct: 106 ELLDVSEDGANVR---RRKELVPV 126
>gi|269861199|ref|XP_002650313.1| LA protein-like protein [Enterocytozoon bieneusi H348]
gi|220066261|gb|EED43751.1| LA protein-like protein [Enterocytozoon bieneusi H348]
Length = 342
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 84/173 (48%), Gaps = 17/173 (9%)
Query: 93 SDLQRKDGGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRF-FSQLLQESPEIEVSVFLKCN 151
+DL G KKQ+ E+Y S++N KD+F F+ ++ +I + + + N
Sbjct: 29 NDLVTSTGDIAKIKKQI--------EYYFSNANFSKDKFLFNTYMENDGKIGIDIIMTFN 80
Query: 152 KLARLTHDPDDVVKALRKSKLLEVTEDGTKVRRTVV-----VQDKPDVDECTIYVEKLPP 206
KL +LT + +DV KA SK++++ +G + + + Q+ +VD+ TI +
Sbjct: 81 KLKKLTTNVEDVKKACVDSKIVKI--EGENIIKKDLDSFKKYQEDSNVDDKTIAISGFNT 138
Query: 207 EAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGL 259
+ D IE K + L + + T + G FVEF+T EEA L L L
Sbjct: 139 KMSFDEIEEYLKKVCTPIRI-LMRRRRTREFSGTCFVEFNTIEEAKNVLSLKL 190
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Query: 1 MEFYLSDSNLRKDRF-FSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEV 59
+E+Y S++N KD+F F+ ++ +I + + + NKL +LT + +DV KA SK++++
Sbjct: 45 IEYYFSNANFSKDKFLFNTYMENDGKIGIDIIMTFNKLKKLTTNVEDVKKACVDSKIVKI 104
>gi|440684828|ref|YP_007159623.1| RNP-1 like RNA-binding protein [Anabaena cylindrica PCC 7122]
gi|428681947|gb|AFZ60713.1| RNP-1 like RNA-binding protein [Anabaena cylindrica PCC 7122]
Length = 102
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 36/60 (60%)
Query: 197 CTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
+IYV L E D + +VF++YG V V LP + TGKL+GF FVE T EE A++
Sbjct: 1 MSIYVGNLSYEVTQDNLTAVFAEYGSVKRVQLPTDRETGKLRGFGFVEMGTDEEETTAID 60
>gi|198431771|ref|XP_002119316.1| PREDICTED: similar to Sjogren syndrome antigen B [Ciona
intestinalis]
Length = 376
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 78/159 (49%), Gaps = 14/159 (8%)
Query: 108 QLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE-IEVSVFLKCNKLARLTHDPDDVVKA 166
QL ++++ +EFY D NL +D+F + ++++ + LK +L+ + +P ++ A
Sbjct: 15 QLGKRLIRQIEFYFGDFNLHRDKFMQEEMKKNDGWFTMDTMLKFKRLSSMCSEPGTILAA 74
Query: 167 LRKSK--LLEVTEDGTKVR----RTVVVQD---KPDVDECTIYVEKLPPEAEHDYIESVF 217
L++SK L+E+ + +R R V D K D+ T+Y + PP + I
Sbjct: 75 LKQSKSGLMEIDIENQSIRRKPSRAVPENDAKYKRDLKMRTVYAKGFPPTESIEDITEFM 134
Query: 218 SKYGKVTYVSL---PKFKSTGKLKGFAFVEFSTKEEAAK 253
+YG V V L KF+ KG F F+ E+A K
Sbjct: 135 EEYGPVDGVQLRRQNKFQGAA-FKGSIFTTFAKLEDAVK 172
>gi|169623995|ref|XP_001805404.1| hypothetical protein SNOG_15247 [Phaeosphaeria nodorum SN15]
gi|111056352|gb|EAT77472.1| hypothetical protein SNOG_15247 [Phaeosphaeria nodorum SN15]
Length = 451
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 41/67 (61%)
Query: 190 DKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKE 249
DK T+++ L + ++ I+ +F +YG +T VSLP + TG LKGF +V+F T E
Sbjct: 291 DKRSAPANTLFLGNLSFDCSNEGIQEIFQEYGNITRVSLPTDRDTGSLKGFGYVDFGTVE 350
Query: 250 EAAKALE 256
EA ALE
Sbjct: 351 EATAALE 357
>gi|47169089|pdb|1S7A|A Chain A, Nmr Structure Of The La Motif Of Human La Protein
Length = 103
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 55/90 (61%), Gaps = 3/90 (3%)
Query: 99 DGGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFF-SQLLQESPEIEVSVFLKCNKLARLT 157
+ G + L +I + +E+Y D NL +D+F Q+ + + + + +K N+L RLT
Sbjct: 3 ENGDNEKMAALEAKICHQIEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLT 62
Query: 158 HDPDDVVKALRKSK--LLEVTEDGTKVRRT 185
D + +V+AL KSK L+E++ED TK+RR+
Sbjct: 63 TDFNVIVEALSKSKAELMEISEDKTKIRRS 92
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 46/70 (65%), Gaps = 3/70 (4%)
Query: 1 MEFYLSDSNLRKDRFF-SQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--LL 57
+E+Y D NL +D+F Q+ + + + + +K N+L RLT D + +V+AL KSK L+
Sbjct: 21 IEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLTTDFNVIVEALSKSKAELM 80
Query: 58 EVTEDGTKVK 67
E++ED TK++
Sbjct: 81 EISEDKTKIR 90
>gi|396471523|ref|XP_003838892.1| hypothetical protein LEMA_P025650.1 [Leptosphaeria maculans JN3]
gi|312215461|emb|CBX95413.1| hypothetical protein LEMA_P025650.1 [Leptosphaeria maculans JN3]
Length = 490
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 43/67 (64%)
Query: 190 DKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKE 249
DK T+++ L + +D I+ +F++YG +T VSLP + TG +KGF +V+F ++E
Sbjct: 330 DKRSAPSNTLFLGNLSFDCTNDSIQEIFAEYGNITRVSLPTDRDTGSIKGFGYVDFGSQE 389
Query: 250 EAAKALE 256
EA AL+
Sbjct: 390 EATAALD 396
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 5/89 (5%)
Query: 168 RKSKLLEVTEDGTKVRRTVVVQDKPDVDEC--TIYVEKLPPEAEHDYIESVFSKYGKVTY 225
+K K E E K +TV ++P E ++V L + D++ F +G++
Sbjct: 206 KKRKAEEAAEPAIKKTKTV---EEPAGAEGIKNLFVGNLSWNIDEDWLRREFEGFGEIVG 262
Query: 226 VSLPKFKSTGKLKGFAFVEFSTKEEAAKA 254
+ + TG+ KGF +VEF+T +AAKA
Sbjct: 263 CRIITDRETGRGKGFGYVEFATSADAAKA 291
>gi|427417658|ref|ZP_18907841.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
7375]
gi|425760371|gb|EKV01224.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
7375]
Length = 98
Score = 57.4 bits (137), Expect = 9e-06, Method: Composition-based stats.
Identities = 28/59 (47%), Positives = 40/59 (67%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
+IYV L + + IE VF +YG+V VSLP + +G+ +GFAFVE + KE+ AKA+E
Sbjct: 2 SIYVGNLSYDVTREDIEEVFKEYGRVNRVSLPMDRESGRPRGFAFVEMAAKEDEAKAIE 60
>gi|240277209|gb|EER40718.1| RNA-binding La domain-containing protein [Ajellomyces capsulatus
H143]
Length = 470
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 81/171 (47%), Gaps = 24/171 (14%)
Query: 112 QIMNLMEFYLSDSNLRKDRFFSQLL--QESPEIEVSVFLKCNKLARLTHDP-DDVVKALR 168
+I +EFY SDSNL D+F + E+ +E+S+ ++ R P VV AL+
Sbjct: 151 EIRKQVEFYFSDSNLLTDKFLLSKVGGSENRPVELSLLHSFKRMRRFQ--PFSAVVDALK 208
Query: 169 KSKLLEVTEDGTKVRRTVVVQD--KPDVDEC------------TIYVEKLPPEAEHDY-- 212
SK LE+T+D T VRR V + + K +D +IY + PE
Sbjct: 209 DSKTLELTDDDTCVRRKVALPETVKESLDPTVVKVFEDKAMHRSIYAKGFGPEEPSTQFD 268
Query: 213 IESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNPCP 263
IE+ F+ YG + L + + KG FVEF + EE KA L L P P
Sbjct: 269 IEAFFTPYGPTNAIRL-RRTAEKIFKGSVFVEFDS-EETQKAF-LALEPKP 316
>gi|71019281|ref|XP_759871.1| hypothetical protein UM03724.1 [Ustilago maydis 521]
gi|46099669|gb|EAK84902.1| hypothetical protein UM03724.1 [Ustilago maydis 521]
Length = 479
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 79/156 (50%), Gaps = 11/156 (7%)
Query: 111 QQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVF-LKCNKLARLTHD---PDDVVKA 166
++ + +EFY DSNL D+F L ++ PE V + + K R D + + +
Sbjct: 36 EEALRQVEFYFHDSNLPFDKFLFTLTRKDPEGWVPIATIASFKRMRAIKDLLGIEGIAQV 95
Query: 167 LRKSK-LLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAE--HDYIESVFSKYGKV 223
LR SK LL+V+EDG VRR + D + +IY + E E +E+ F+ +GKV
Sbjct: 96 LRGSKELLDVSEDGANVRRRKELVPVKDAFDRSIYAKGFGDETETLQKELEAFFNTFGKV 155
Query: 224 TYVSLPK-FKSTGK---LKGFAFVEFSTKEEAAKAL 255
V + + +S+ K KG FVEF+ ++ K L
Sbjct: 156 NSVRMRRDMESSAKPKPFKGSVFVEFAEMDDRNKFL 191
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVF-LKCNKLARLTHD---PDDVVKALRKSK- 55
+EFY DSNL D+F L ++ PE V + + K R D + + + LR SK
Sbjct: 42 VEFYFHDSNLPFDKFLFTLTRKDPEGWVPIATIASFKRMRAIKDLLGIEGIAQVLRGSKE 101
Query: 56 LLEVTEDGTKVKGNIIRHFLVPI 78
LL+V+EDG V+ R LVP+
Sbjct: 102 LLDVSEDGANVR---RRKELVPV 121
>gi|357624099|gb|EHJ74998.1| acheron [Danaus plexippus]
Length = 402
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 87/174 (50%), Gaps = 28/174 (16%)
Query: 107 KQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN--KLARLTHDPDDVV 164
++L +I++ +EFY SD+N+ KD F + ++ + E VS+ L + ++ LT D V
Sbjct: 62 EELANRIVSQVEFYFSDANITKDAFLLKHVRRNKEGYVSLKLISSFKRVKHLTKDWRVVA 121
Query: 165 KALRKSKLLEVTEDGTKVRRTVVVQDKPDVDEC----TIYVEKLP---PEAEHDYIESVF 217
+AL++S LE+ E GTK+RRT + P DE T+ ++P P E+ + +F
Sbjct: 122 EALKRSTKLEINEPGTKLRRTDPL---PAYDETTPSRTVVAVRMPIDRPTVEN--VSRLF 176
Query: 218 SKYGKVTYVSL--PKFKSTGKLKGF------------AFVEFSTKEEAAKALEL 257
+ G++ V + P ++ F A VEF+ E A AL L
Sbjct: 177 ASCGEIALVRVLRPGNPVPADVRQFLNKNPSLVNCVCALVEFTESEAARGALRL 230
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN--KLARLTHDPDDVVKALRKSKLLE 58
+EFY SD+N+ KD F + ++ + E VS+ L + ++ LT D V +AL++S LE
Sbjct: 72 VEFYFSDANITKDAFLLKHVRRNKEGYVSLKLISSFKRVKHLTKDWRVVAEALKRSTKLE 131
Query: 59 VTEDGTKVK 67
+ E GTK++
Sbjct: 132 INEPGTKLR 140
>gi|298492453|ref|YP_003722630.1| RNP-1 like RNA-binding protein ['Nostoc azollae' 0708]
gi|298234371|gb|ADI65507.1| RNP-1 like RNA-binding protein ['Nostoc azollae' 0708]
Length = 102
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 36/60 (60%)
Query: 197 CTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
+IYV L E D + +VF++YG V V LP + TGKL+GF FVE T+ E A+E
Sbjct: 1 MSIYVGNLSYEVTQDTLSAVFAEYGSVRRVQLPTDRETGKLRGFGFVEMGTEAEETTAIE 60
>gi|357447339|ref|XP_003593945.1| La-related protein [Medicago truncatula]
gi|355482993|gb|AES64196.1| La-related protein [Medicago truncatula]
gi|388506372|gb|AFK41252.1| unknown [Medicago truncatula]
Length = 406
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 77/162 (47%), Gaps = 16/162 (9%)
Query: 112 QIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRK 169
+I+ +E+Y SD NL D++ L++ + E + + K+ RLT D + AL++
Sbjct: 106 KIIKQVEYYFSDENLPTDKYMLSLVKRNKEGFVPIPAIASFRKMKRLTRDHLFIAAALKE 165
Query: 170 SKLLEVTEDGTKVRR--TVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVS 227
S LL V+ DG +V+R + + D T+ E LP + + I +F G + ++
Sbjct: 166 SSLLVVSGDGKRVKRLNPLRFNEVKDHKLYTVLAENLPEDHSRENIRQIFQIAGNIKKLT 225
Query: 228 LPKFKSTG---------KLKG---FAFVEFSTKEEAAKALEL 257
+ +ST K G A VE+ T E A KA+ +
Sbjct: 226 INDPRSTAASAKHIKQDKFIGSKLHALVEYETIEGAEKAVAM 267
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 72/149 (48%), Gaps = 21/149 (14%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
+E+Y SD NL D++ L++ + E + + K+ RLT D + AL++S LL
Sbjct: 111 VEYYFSDENLPTDKYMLSLVKRNKEGFVPIPAIASFRKMKRLTRDHLFIAAALKESSLLV 170
Query: 59 VTEDGTKVKG-NIIRHFLVP-ISMETEASDNVDKDLSDLQRKDGGGRHRKKQLYQQIMNL 116
V+ DG +VK N +R V + T ++N+ +D S R +Q++Q N+
Sbjct: 171 VSGDGKRVKRLNPLRFNEVKDHKLYTVLAENLPEDHS---------RENIRQIFQIAGNI 221
Query: 117 MEFYLSD--------SNLRKDRFFSQLLQ 137
+ ++D ++++D+F L
Sbjct: 222 KKLTINDPRSTAASAKHIKQDKFIGSKLH 250
>gi|91082895|ref|XP_972070.1| PREDICTED: similar to lupus la ribonucleoprotein [Tribolium
castaneum]
gi|270007069|gb|EFA03517.1| hypothetical protein TcasGA2_TC013519 [Tribolium castaneum]
Length = 341
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 77/160 (48%), Gaps = 11/160 (6%)
Query: 108 QLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE-IEVSVFLKCNKLARLTHDPDDVVKA 166
+L +I+ +E+Y D NL +D+F + L+E I + V L +LA L+ DP + A
Sbjct: 4 ELENKIIRQIEYYFGDINLPRDKFMQEKLKEDEGWISLEVLLTFKRLASLSEDPAVIAAA 63
Query: 167 LRKSK--LLEVTEDGTKVRRT-------VVVQDKPDVDECTIYVEKLPPEAEHDYIESVF 217
+ K++ L+EV+ED K+RR + K ++ E T Y + P + + I S
Sbjct: 64 VEKAENGLVEVSEDKKKIRRNPDLPLPELNDARKKELMERTAYAKGFPLDETLNDIMSFM 123
Query: 218 SKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALEL 257
++G + K KG F+ F KE K +EL
Sbjct: 124 EQHGPIESCHRRSNKDHT-FKGSCFIIFKDKEACKKFIEL 162
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE-IEVSVFLKCNKLARLTHDPDDVVKALRKSK--LL 57
+E+Y D NL +D+F + L+E I + V L +LA L+ DP + A+ K++ L+
Sbjct: 13 IEYYFGDINLPRDKFMQEKLKEDEGWISLEVLLTFKRLASLSEDPAVIAAAVEKAENGLV 72
Query: 58 EVTEDGTKVKGN 69
EV+ED K++ N
Sbjct: 73 EVSEDKKKIRRN 84
>gi|154285890|ref|XP_001543740.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150407381|gb|EDN02922.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 466
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 81/171 (47%), Gaps = 24/171 (14%)
Query: 112 QIMNLMEFYLSDSNLRKDRFFSQLL--QESPEIEVSVFLKCNKLARLTHDP-DDVVKALR 168
+I +EFY SDSNL D+F + E+ +E+S+ ++ R P VV AL+
Sbjct: 147 EIRKQVEFYFSDSNLLMDKFLLSKVGGSENRPVELSLLHSFKRMRRFQ--PFSAVVDALK 204
Query: 169 KSKLLEVTEDGTKVRRTVVVQD--KPDVDEC------------TIYVEKLPPEAEHDY-- 212
SK LE+T+D T VRR V + + K +D +IY + PE
Sbjct: 205 DSKTLELTDDNTCVRRKVALPETVKDSLDPTVVKVFENKAMHRSIYAKGFGPEEPSTQFD 264
Query: 213 IESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNPCP 263
IE+ F+ YG + L + + KG FVEF + EE KA L L P P
Sbjct: 265 IEAFFTPYGPTNAIRL-RRTAEKIFKGSVFVEFDS-EETQKAF-LALEPKP 312
>gi|359478240|ref|XP_003632090.1| PREDICTED: uncharacterized protein LOC100259405 isoform 2 [Vitis
vinifera]
Length = 438
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 59/124 (47%), Gaps = 4/124 (3%)
Query: 107 KQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVV 164
+++ Q+I+N +E+Y SD NL + + + PE + +SV K+ L +
Sbjct: 134 EEVTQKILNQVEYYFSDVNLATTEHLMRFINKDPEGYVPISVVASFKKIKALVSSHSQLA 193
Query: 165 KALRKSKLLEVTEDGTKVRR--TVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGK 222
LR S L V+EDG KVRR + D ++ + E LP + H + +FS G
Sbjct: 194 TVLRNSTKLVVSEDGKKVRRLHPLTESDMEELQSRIVVAENLPEDHCHQNLMKIFSAVGS 253
Query: 223 VTYV 226
V +
Sbjct: 254 VKTI 257
Score = 37.7 bits (86), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
+E+Y SD NL + + + PE + +SV K+ L + LR S L
Sbjct: 144 VEYYFSDVNLATTEHLMRFINKDPEGYVPISVVASFKKIKALVSSHSQLATVLRNSTKLV 203
Query: 59 VTEDGTKVK 67
V+EDG KV+
Sbjct: 204 VSEDGKKVR 212
>gi|389629168|ref|XP_003712237.1| polyadenylate-binding protein [Magnaporthe oryzae 70-15]
gi|158514092|sp|A4QUF0.1|PABP_MAGO7 RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|351644569|gb|EHA52430.1| polyadenylate-binding protein [Magnaporthe oryzae 70-15]
gi|440469069|gb|ELQ38192.1| polyadenylate-binding protein [Magnaporthe oryzae Y34]
gi|440487573|gb|ELQ67355.1| polyadenylate-binding protein [Magnaporthe oryzae P131]
Length = 762
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 39/60 (65%)
Query: 197 CTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
IYV+ + PE D ++F KYG VT SL + + TGK +GF FV F++ E+A+KA++
Sbjct: 242 TNIYVKNINPEVTDDEFRTLFEKYGDVTSSSLARDQETGKSRGFGFVNFTSHEDASKAVQ 301
>gi|301095902|ref|XP_002897050.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262108479|gb|EEY66531.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 286
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 43/71 (60%), Gaps = 2/71 (2%)
Query: 191 KPDVDEC-TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKE 249
K V C T+Y+++LP E E D I + G +T V LP + T KLKGF +VEFS+++
Sbjct: 156 KKAVKGCRTVYIKQLPYEVEEDTIRQALASCGTITSVRLPIWNHTKKLKGFGYVEFSSED 215
Query: 250 EA-AKALELGL 259
EA A A G+
Sbjct: 216 EALAAARRSGM 226
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 43/76 (56%), Gaps = 3/76 (3%)
Query: 185 TVVVQDKPDVD---ECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFA 241
+ Q K ++D E T+YVE +P +A I + FS G V V +P+++ +GK +G+A
Sbjct: 47 NAMFQLKDEIDRKTEATVYVEGIPYKASEGDIVTHFSSCGTVREVRMPRYQDSGKPRGYA 106
Query: 242 FVEFSTKEEAAKALEL 257
V F + KALEL
Sbjct: 107 HVVFDDEAALEKALEL 122
>gi|18447066|gb|AAL68124.1| AT22034p [Drosophila melanogaster]
Length = 390
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 81/159 (50%), Gaps = 15/159 (9%)
Query: 113 IMNLMEFYLSDSNLRKDRFFSQLL--QESPEIEVSVFLKCNKLARLTHDPDDVVKALRKS 170
I+ +E+Y D+NL +D+F + + E + +SV + +LA L+ D ++V AL KS
Sbjct: 54 IIRQVEYYFGDANLNRDKFLREQIGKNEDGWVPLSVLVTFKRLASLSTDLSEIVAALNKS 113
Query: 171 K--LLEVTEDGTKVRR-------TVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYG 221
+ L+E++ED +RR + + ++ E T Y + P +++ + + Y
Sbjct: 114 EEGLVEISEDKLSLRRHPERPIPEHNEERRKEIQERTAYAKGFPLDSQISELLDFAANYD 173
Query: 222 KVTYVSLPKF----KSTGKLKGFAFVEFSTKEEAAKALE 256
KV +++ K + K KG F+ F TK++A LE
Sbjct: 174 KVVNLTMRKHYDKPTKSYKFKGSIFLTFETKDQAKAFLE 212
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 8/87 (9%)
Query: 1 MEFYLSDSNLRKDRFFSQLL--QESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--L 56
+E+Y D+NL +D+F + + E + +SV + +LA L+ D ++V AL KS+ L
Sbjct: 58 VEYYFGDANLNRDKFLREQIGKNEDGWVPLSVLVTFKRLASLSTDLSEIVAALNKSEEGL 117
Query: 57 LEVTEDGTKVKGNIIRHFLVPISMETE 83
+E++ED K ++ RH PI E
Sbjct: 118 VEISED----KLSLRRHPERPIPEHNE 140
>gi|41054695|ref|NP_955841.1| Sjogren syndrome antigen B (autoantigen La) [Danio rerio]
gi|28277634|gb|AAH45392.1| Sjogren syndrome antigen B (autoantigen La) [Danio rerio]
gi|182889526|gb|AAI65298.1| Ssb protein [Danio rerio]
Length = 401
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 78/160 (48%), Gaps = 18/160 (11%)
Query: 109 LYQQIMNLMEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKAL 167
L +++ +E+Y D NL +D+F + LQ + + + LK N+L LT + +V++L
Sbjct: 10 LEKKVAEQIEYYFGDHNLPRDKFLKEQLQLDDGWVPLETMLKFNRLKSLTSEESVIVESL 69
Query: 168 RKSK--LLEVTEDGTKVRRTVVVQDKP----------DVDECTIYVEKLPPEAEHDYIES 215
KSK LLE++ED TK+RR +KP + +IY++ P E D ++
Sbjct: 70 LKSKTGLLEISEDKTKIRRDP---NKPLPENNEEYRDALKHKSIYMKGFPLETTLDDVKE 126
Query: 216 VFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKAL 255
+ G + L K KG F T EEAAKA
Sbjct: 127 WLADKGTFENIYLRKGPQKT-FKGSIFAVLET-EEAAKAF 164
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 44/70 (62%), Gaps = 3/70 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--LL 57
+E+Y D NL +D+F + LQ + + + LK N+L LT + +V++L KSK LL
Sbjct: 18 IEYYFGDHNLPRDKFLKEQLQLDDGWVPLETMLKFNRLKSLTSEESVIVESLLKSKTGLL 77
Query: 58 EVTEDGTKVK 67
E++ED TK++
Sbjct: 78 EISEDKTKIR 87
>gi|393908065|gb|EJD74888.1| La domain-containing protein [Loa loa]
Length = 647
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 68/149 (45%), Gaps = 15/149 (10%)
Query: 107 KQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKA 166
+Q+ QQ+ +E+Y S NL D+F + + + + K+ RLT D VVK
Sbjct: 148 EQIKQQLKAQLEYYFSRENLMTDKFLRCQMDNDQYVPIRIIASFPKIKRLTSDYSLVVKV 207
Query: 167 LRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYV 226
LR+S ++V E G +VR CTI + ++P + + S+F+ G Y+
Sbjct: 208 LRESSQVQVDEKGQRVRAV--------SKRCTIILREIPESTDEKEVASMFT--GGPPYL 257
Query: 227 SLPKFKSTGKLKGFAFVEFSTKEEAAKAL 255
SL L +V F ++E +A
Sbjct: 258 SL-----QYGLNNSWYVTFESEEATERAF 281
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEVT 60
+E+Y S NL D+F + + + + K+ RLT D VVK LR+S ++V
Sbjct: 158 LEYYFSRENLMTDKFLRCQMDNDQYVPIRIIASFPKIKRLTSDYSLVVKVLRESSQVQVD 217
Query: 61 EDGTKVKG 68
E G +V+
Sbjct: 218 EKGQRVRA 225
>gi|149247856|ref|XP_001528316.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146448270|gb|EDK42658.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 335
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 99/196 (50%), Gaps = 32/196 (16%)
Query: 111 QQIMNLMEFYLSDSNLRKDRFFSQLLQESPE-IEVSVFLKCNKLARLTHDPDD-VVKALR 168
++++ +EFY SDSNL+ D+F ++ + + +E+ L ++ + + P++ V++AL+
Sbjct: 13 EKVIRQVEFYFSDSNLQLDKFLWKIYEANDGWVELKTILTFGRMKQ--YRPEEKVIEALK 70
Query: 169 KSKLLEVTEDGTKVRRTVVVQDKPDVDEC----TIYVEKLPPEAEHDYIESVFSKYGKVT 224
KS LE++ + ++RT ++D +V T+++E P E D IE+ F G+
Sbjct: 71 KSTKLELSANNELIKRTDPLKDFDEVKNTKKKNTVHIEGFPHELNQDQIEAWF---GEKV 127
Query: 225 YVSLPKFKSTGKLK-----------GFAFVEFSTKEEA---AKALELGLNP--CPPDYQS 268
SLPK K ++ G VEF T+E+A + +EL P D +
Sbjct: 128 VPSLPKEKDFNSIRMIKTRAKKEFFGVVDVEFKTEEDAKYVVEDVELSYEKGVIPKDEAT 187
Query: 269 SI-----LTTTSRLSF 279
+I L S+L+F
Sbjct: 188 NIDKKDLLKKMSQLTF 203
>gi|356519683|ref|XP_003528499.1| PREDICTED: uncharacterized protein LOC100796786 [Glycine max]
Length = 399
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 79/162 (48%), Gaps = 14/162 (8%)
Query: 109 LYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKA 166
L Q+I+ +E+ SD +L + F + + + PE + ++V K+ L + + + +A
Sbjct: 95 LQQKIVKQVEYQFSDMSLLANESFHKQINKDPEGYVPITVIASTKKVKSLVSNINMLTQA 154
Query: 167 LRKSKLLEVTEDGTKVRR--TVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVT 224
+R S L ++ DG KV+R ++K D+ T+ E LP + H ++ +F G V
Sbjct: 155 IRSSSKLVLSVDGKKVKRKHPYTEREKEDLQSRTVVAENLPDDHSHQNLQKIFGMVGSVK 214
Query: 225 YVSL--PKFKSTGKLKG--------FAFVEFSTKEEAAKALE 256
+ + P+ ++ + K A VE+ T + A KA E
Sbjct: 215 TIRICHPQEPNSSRPKSDFFVSNKLHALVEYETSDIAEKAAE 256
>gi|17136954|ref|NP_477014.1| La autoantigen-like [Drosophila melanogaster]
gi|12643981|sp|P40796.2|LA_DROME RecName: Full=La protein homolog; AltName: Full=La autoantigen
homolog; AltName: Full=La ribonucleoprotein
gi|488470|gb|AAA21776.1| La ribonucleoprotein [Drosophila melanogaster]
gi|7298671|gb|AAF53885.1| La autoantigen-like [Drosophila melanogaster]
Length = 390
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 81/159 (50%), Gaps = 15/159 (9%)
Query: 113 IMNLMEFYLSDSNLRKDRFFSQLL--QESPEIEVSVFLKCNKLARLTHDPDDVVKALRKS 170
I+ +E+Y D+NL +D+F + + E + +SV + +LA L+ D ++V AL KS
Sbjct: 54 IIRQVEYYFGDANLNRDKFLREQIGKNEDGWVPLSVLVTFKRLASLSTDLSEIVAALNKS 113
Query: 171 K--LLEVTEDGTKVRR-------TVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYG 221
+ L+E++ED +RR + + ++ E T Y + P +++ + + Y
Sbjct: 114 EEGLVEISEDKLSLRRHPERPIPEHNEERRKEIQERTAYAKGFPLDSQISELLDFAANYD 173
Query: 222 KVTYVSLPKF----KSTGKLKGFAFVEFSTKEEAAKALE 256
KV +++ K + K KG F+ F TK++A LE
Sbjct: 174 KVVNLTMRKHYDKPTKSYKFKGSIFLTFETKDQAKAFLE 212
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 8/87 (9%)
Query: 1 MEFYLSDSNLRKDRFFSQLL--QESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--L 56
+E+Y D+NL +D+F + + E + +SV + +LA L+ D ++V AL KS+ L
Sbjct: 58 VEYYFGDANLNRDKFLREQIGKNEDGWVPLSVLVTFKRLASLSTDLSEIVAALNKSEEGL 117
Query: 57 LEVTEDGTKVKGNIIRHFLVPISMETE 83
+E++ED K ++ RH PI E
Sbjct: 118 VEISED----KLSLRRHPERPIPEHNE 140
>gi|195351813|ref|XP_002042423.1| GM23332 [Drosophila sechellia]
gi|194124292|gb|EDW46335.1| GM23332 [Drosophila sechellia]
Length = 390
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 80/159 (50%), Gaps = 15/159 (9%)
Query: 113 IMNLMEFYLSDSNLRKDRFFSQLL--QESPEIEVSVFLKCNKLARLTHDPDDVVKALRKS 170
I+ +E+Y D+NL +D+F + + E + +SV + +LA L+ D ++V AL KS
Sbjct: 54 IIRQVEYYFGDANLNRDKFLREQIGKNEDGWVPLSVLVTFKRLASLSTDLSEIVAALNKS 113
Query: 171 K--LLEVTEDGTKVRR-------TVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYG 221
+ L+E++ED +RR + + ++ E T Y + P +++ + Y
Sbjct: 114 EEGLVEISEDKLSLRRHPERPIPEHNEERRKEIQERTAYAKGFPLDSQISELLDFAGNYD 173
Query: 222 KVTYVSLPKF----KSTGKLKGFAFVEFSTKEEAAKALE 256
KV +++ K + K KG F+ F TK++A LE
Sbjct: 174 KVVNLTMRKHYDKPTKSYKFKGSIFLTFETKDQAKAFLE 212
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 8/87 (9%)
Query: 1 MEFYLSDSNLRKDRFFSQLL--QESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--L 56
+E+Y D+NL +D+F + + E + +SV + +LA L+ D ++V AL KS+ L
Sbjct: 58 VEYYFGDANLNRDKFLREQIGKNEDGWVPLSVLVTFKRLASLSTDLSEIVAALNKSEEGL 117
Query: 57 LEVTEDGTKVKGNIIRHFLVPISMETE 83
+E++ED K ++ RH PI E
Sbjct: 118 VEISED----KLSLRRHPERPIPEHNE 140
>gi|443324398|ref|ZP_21053165.1| RRM domain-containing RNA-binding protein [Xenococcus sp. PCC 7305]
gi|442795980|gb|ELS05312.1| RRM domain-containing RNA-binding protein [Xenococcus sp. PCC 7305]
Length = 90
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 39/59 (66%)
Query: 197 CTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKAL 255
+IYV L E + +E VFS+YGKVT V LP + +G+ +GFAFVE S+K+E A+
Sbjct: 1 MSIYVGNLDYSLEKEDLEEVFSEYGKVTRVHLPTDRESGRKRGFAFVEMSSKDEENAAI 59
>gi|67479049|ref|XP_654906.1| La ribonucleoprotein [Entamoeba histolytica HM-1:IMSS]
gi|56471994|gb|EAL49518.1| La ribonucleoprotein, putative [Entamoeba histolytica HM-1:IMSS]
gi|449705946|gb|EMD45891.1| La ribonucleoprotein, putative [Entamoeba histolytica KU27]
Length = 347
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 77/148 (52%), Gaps = 11/148 (7%)
Query: 113 IMNLMEFYLSDSNLRKDRFFSQLLQESPE-IEVSVFLKCNKLARLTHDPDDVVKALRKSK 171
I+N +EFY D NL +D F +++ S + + + K+ LT + ++++ AL KS
Sbjct: 4 ILNQIEFYFCDLNLIQDTFLKGVIETSNGFVTIDTLMGFVKVKELTENKEEIINALSKSS 63
Query: 172 LLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKF 231
LE++ED V+R + + ++++ +++++ +A I +K+ +V + +
Sbjct: 64 FLELSEDKQSVKRKTPLPTEEEINKRSLFIKGFGKDATRQEIIDALNKFAQVECIRM--- 120
Query: 232 KSTGKLK------GFAFVEFSTKEEAAK 253
+ G+ K G AFVEF ++ E K
Sbjct: 121 -NYGRNKEGQFYLGNAFVEFVSEAEKDK 147
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE-IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEV 59
+EFY D NL +D F +++ S + + + K+ LT + ++++ AL KS LE+
Sbjct: 8 IEFYFCDLNLIQDTFLKGVIETSNGFVTIDTLMGFVKVKELTENKEEIINALSKSSFLEL 67
Query: 60 TEDGTKVK 67
+ED VK
Sbjct: 68 SEDKQSVK 75
>gi|119511522|ref|ZP_01630631.1| RNA-binding region protein [Nodularia spumigena CCY9414]
gi|119463833|gb|EAW44761.1| RNA-binding region protein [Nodularia spumigena CCY9414]
Length = 102
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%)
Query: 197 CTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
++YV L E D + +VF++YG V V LP + TG+L+GF FVE T +E A+E
Sbjct: 1 MSVYVGNLSYEVTQDTLSAVFAEYGSVKRVQLPTNRETGQLRGFGFVEMGTDDEETAAIE 60
>gi|195580366|ref|XP_002080021.1| GD21707 [Drosophila simulans]
gi|194192030|gb|EDX05606.1| GD21707 [Drosophila simulans]
Length = 390
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 80/159 (50%), Gaps = 15/159 (9%)
Query: 113 IMNLMEFYLSDSNLRKDRFFSQLL--QESPEIEVSVFLKCNKLARLTHDPDDVVKALRKS 170
I+ +E+Y D+NL +D+F + + E + +SV + +LA L+ D ++V AL KS
Sbjct: 54 IIRQVEYYFGDANLNRDKFLREQIGKNEDGWVPLSVLVTFKRLASLSTDLSEIVAALNKS 113
Query: 171 K--LLEVTEDGTKVRR-------TVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYG 221
+ L+E++ED +RR + + ++ E T Y + P +++ + Y
Sbjct: 114 EEGLVEISEDKLSLRRHPERPIPEHNEERRKEIQERTAYAKGFPLDSQISELLDFAGNYD 173
Query: 222 KVTYVSLPKF----KSTGKLKGFAFVEFSTKEEAAKALE 256
KV +++ K + K KG F+ F TK++A LE
Sbjct: 174 KVVNLTMRKHYDKPTKSYKFKGSIFLTFETKDQAKAFLE 212
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 8/87 (9%)
Query: 1 MEFYLSDSNLRKDRFFSQLL--QESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--L 56
+E+Y D+NL +D+F + + E + +SV + +LA L+ D ++V AL KS+ L
Sbjct: 58 VEYYFGDANLNRDKFLREQIGKNEDGWVPLSVLVTFKRLASLSTDLSEIVAALNKSEEGL 117
Query: 57 LEVTEDGTKVKGNIIRHFLVPISMETE 83
+E++ED K ++ RH PI E
Sbjct: 118 VEISED----KLSLRRHPERPIPEHNE 140
>gi|344304976|gb|EGW35208.1| hypothetical protein SPAPADRAFT_58408 [Spathaspora passalidarum
NRRL Y-27907]
Length = 287
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 85/180 (47%), Gaps = 24/180 (13%)
Query: 111 QQIMNLMEFYLSDSNLRKDRFFSQLLQESPE-IEVSVFLKCNKLARLTHDPDDVVKALRK 169
+++ +EFY SDSNL+ D+F ++ Q + +E+ L ++ R + V+ AL++
Sbjct: 13 EKVRKQVEFYFSDSNLQTDKFLWKIYQANEGWVELKTILTFGRM-RQYRPEEKVIAALKE 71
Query: 170 SKLLEVTEDGTKVRRTVVVQDKPDVDEC----TIYVEKLPPEAEHDYIESVFSKYGKVTY 225
S L ++E G ++R V+D ++ TI++E P +A + +ES F +
Sbjct: 72 SSQLVLSESGDMIKRKEPVKDLDEIKNTRKKNTIHIEGFPKDATQEDLESWFQEK---IV 128
Query: 226 VSLPKFKSTGKLK-----------GFAFVEFSTKEEAAKALELGLNPCPPDYQSSILTTT 274
VSLPK + L+ G VE T E+A E LN Y I+T T
Sbjct: 129 VSLPKEQGISSLRRIKSRAKKEFFGVVDVELKTLEDA----EYLLNEVELAYPQGIVTAT 184
>gi|340380729|ref|XP_003388874.1| PREDICTED: la-related protein 6-like [Amphimedon queenslandica]
Length = 383
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 87/175 (49%), Gaps = 27/175 (15%)
Query: 109 LYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN--KLARLTHDPDDVVKA 166
L ++ +E+Y SD NL+KD F + + + + VS+ L + K+ +T D V+ A
Sbjct: 86 LMERARKQVEWYFSDENLQKDSFLMKHITRNKQGYVSLKLVASLRKVKSITKDWKIVLTA 145
Query: 167 LRKSKLLEVTEDGTKVRRTVVVQDKPDVDEC----TIYVEKLPPE-AEHDYIESVFSKYG 221
++ S LL+V E+GTKVRR ++ P VD T+ + P + + + FS+YG
Sbjct: 146 VQSSTLLQVNEEGTKVRR---LEAAPKVDYSHLPKTLLITNYPTQDPDESDVRHEFSRYG 202
Query: 222 KVTYV-------SLP--------KFKSTGKLKGFAFVEFSTKEEAAKAL-ELGLN 260
V V ++P KF + GK + VE+++ EA KA EL N
Sbjct: 203 NVKNVTFMRPGRAIPLDVKSCRSKFPAIGK-EPCILVEYASISEAKKAFKELSQN 256
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN--KLARLTHDPDDVVKALRKSKLLE 58
+E+Y SD NL+KD F + + + + VS+ L + K+ +T D V+ A++ S LL+
Sbjct: 94 VEWYFSDENLQKDSFLMKHITRNKQGYVSLKLVASLRKVKSITKDWKIVLTAVQSSTLLQ 153
Query: 59 VTEDGTKVK 67
V E+GTKV+
Sbjct: 154 VNEEGTKVR 162
>gi|256048769|ref|XP_002569484.1| hypothetical protein [Schistosoma mansoni]
gi|350646523|emb|CCD58833.1| hypothetical protein Smp_192360 [Schistosoma mansoni]
Length = 168
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Query: 178 DGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKL 237
D + + DK DE T+ V LPP+ D ++SVFS +G V + K K T +
Sbjct: 72 DAANTTGSSMSTDKRPFDENTVRVTNLPPDTTADELKSVFSAFGHVMRIYPAKDKLTQQN 131
Query: 238 KGFAFVEFSTKEEAAKALELGLN 260
+GFAF+ F T EEA A+ G+N
Sbjct: 132 RGFAFISFRTAEEAKSAI-YGVN 153
>gi|427710388|ref|YP_007052765.1| RNP-1 like RNA-binding protein [Nostoc sp. PCC 7107]
gi|427362893|gb|AFY45615.1| RNP-1 like RNA-binding protein [Nostoc sp. PCC 7107]
Length = 106
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 37/59 (62%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
+IYV L E D + SVF++YG V + +P + TG+L+GFAFVE S+ E A++
Sbjct: 2 SIYVGNLSYEVTQDALNSVFAEYGSVKRIQIPTDRETGRLRGFAFVEMSSDAEETAAID 60
>gi|198416933|ref|XP_002130806.1| PREDICTED: similar to acheron [Ciona intestinalis]
Length = 484
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 91/193 (47%), Gaps = 21/193 (10%)
Query: 80 METEASDNVDKDLSDLQRKDGGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQES 139
+ + D+ KD + ++D R K L ++I L+E Y SD+NL KD+F + ++ +
Sbjct: 34 LSSGGEDDDAKDFFETLKEDATWRVPPKDLEEKIRTLLEHYFSDANLTKDKFLLKHVKRN 93
Query: 140 PEIEVSVFLKCN--KLARLT-HDPDDVVKALRKSKLLEVTEDGTKVRRTVVVQDKPDVDE 196
VSV L + KL L+ D L +SK+LE+ + GTKVRR + PD+D
Sbjct: 94 KLGYVSVKLLTSFKKLKNLSKSDWRITAYCLSQSKVLELNKSGTKVRRKEPL---PDIDL 150
Query: 197 CTIYVE----KLPPEAEHDYIESV---FSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKE 249
T ++ KLP E I+ V F +G++T V + ++ V +
Sbjct: 151 PTSSIKTLLYKLPDGMEEPTIDGVSEQFRSFGELTTVRI--------IRPGKEVPVDLRN 202
Query: 250 EAAKALELGLNPC 262
K ELG+ C
Sbjct: 203 HTTKHPELGVQTC 215
>gi|393228964|gb|EJD36597.1| hypothetical protein AURDEDRAFT_154585 [Auricularia delicata
TFB-10046 SS5]
Length = 590
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 88/181 (48%), Gaps = 17/181 (9%)
Query: 112 QIMNLMEFYLSDSNLRKDRF-FSQLLQESPE--IEVSVFLKCNKLARL--THDPDDVVKA 166
+ + +EFY SD NL D+F + Q ++ + + ++V N+L TH + VV A
Sbjct: 49 RCLRQVEFYFSDGNLPFDQFLWKQHSKDGADHWVPLAVLATFNRLRGFFDTHGKEWVVAA 108
Query: 167 LRKS-KLLEVTEDGTKVRRTVVVQDKPDVDEC-TIYVEKLPPEAE-----HDYIESVFSK 219
LRKS +LLEV G VRR + C ++YV+ E HD + + F++
Sbjct: 109 LRKSARLLEVDGSGNNVRRRPALAKHAVSGWCRSVYVKGFGRGPEFNGTLHD-LHNFFTQ 167
Query: 220 YGKVTYVSLPKFKSTG-KLKGFAFVEFSTKEEAAKALELGLNPCPPDYQSSILTTTSRLS 278
+ VT V+L + KS KG FVEF+ EA + L P PP + + L T +
Sbjct: 168 FAYVTAVNLRREKSNSMDFKGSVFVEFADVLEAEAF--VALQP-PPIWNGTELITMGKQE 224
Query: 279 F 279
+
Sbjct: 225 Y 225
>gi|414869781|tpg|DAA48338.1| TPA: hypothetical protein ZEAMMB73_076919 [Zea mays]
Length = 430
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 76/161 (47%), Gaps = 17/161 (10%)
Query: 111 QQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALR 168
++++ +EFY SD NL + + + P+ + +SV K+ + +D +V ALR
Sbjct: 110 RKLVKQVEFYFSDINLATTEHLMKFIAKDPDGFVPISVVASFRKIREIVYDRSLLVAALR 169
Query: 169 KSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTY--- 225
S L V+EDG V+R + +V + E LP + +H + +FS G V
Sbjct: 170 TSSELVVSEDGKHVKRLQPFNAE-EVQSRIVVAENLPEDQKHQTLMKIFSAVGNVKSIRT 228
Query: 226 -----VSLPKFKSTGKL------KGFAFVEFSTKEEAAKAL 255
+S T ++ K +FVE+ST E+A KA+
Sbjct: 229 CYPQDISPAAANRTSRIEMIFANKLHSFVEYSTVEDAEKAV 269
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
+EFY SD NL + + + P+ + +SV K+ + +D +V ALR S L
Sbjct: 116 VEFYFSDINLATTEHLMKFIAKDPDGFVPISVVASFRKIREIVYDRSLLVAALRTSSELV 175
Query: 59 VTEDGTKVK 67
V+EDG VK
Sbjct: 176 VSEDGKHVK 184
>gi|340719149|ref|XP_003398019.1| PREDICTED: la protein homolog [Bombus terrestris]
Length = 421
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 82/156 (52%), Gaps = 12/156 (7%)
Query: 108 QLYQQIMNLMEFYLSDSNLRKDRFF-SQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKA 166
+L ++I N +EFY D N+++D+F Q + I +++ L LA ++ D + +++A
Sbjct: 57 ELLERIKNQIEFYFGDVNMQRDKFLIEQTKLDEGWIPMTIMLNFKLLASMSQDINVILEA 116
Query: 167 LRKSKLLEVTEDGTKVRRT------VVVQDKPDVDEC-TIYVEKLPPEAEH-DYIESVFS 218
++ S+L+E++ED K+RR+ V ++ E T+Y++ P + + +++ S
Sbjct: 117 VKSSELMEISEDRKKIRRSPKHPLPVYNEEYRKAQEAKTVYLKGFPLQGTTIEKLKTFLS 176
Query: 219 KYGKVTYVSLPKFKSTGK---LKGFAFVEFSTKEEA 251
Y + + K+ K KG FV+F T E A
Sbjct: 177 DYEPFDNIVMRKYVDKEKKFQFKGSIFVQFKTLENA 212
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 1 MEFYLSDSNLRKDRFF-SQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEV 59
+EFY D N+++D+F Q + I +++ L LA ++ D + +++A++ S+L+E+
Sbjct: 66 IEFYFGDVNMQRDKFLIEQTKLDEGWIPMTIMLNFKLLASMSQDINVILEAVKSSELMEI 125
Query: 60 TEDGTKVK 67
+ED K++
Sbjct: 126 SEDRKKIR 133
>gi|118375162|ref|XP_001020766.1| probable RNA-binding protein [Tetrahymena thermophila]
gi|89302533|gb|EAS00521.1| probable RNA-binding protein [Tetrahymena thermophila SB210]
Length = 718
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 48/82 (58%), Gaps = 3/82 (3%)
Query: 174 EVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKS 233
EV++D ++ + P +D+C +YV LP + + ++ VF KYGK+ + +PK K
Sbjct: 229 EVSQDAK--QKNSSSNNDPMIDDCRLYVLNLPYDITEEEVKDVFRKYGKLLEIKMPKGKG 286
Query: 234 TGKLKGFAFVEFSTKEEAAKAL 255
G+ +GFA++ +S EA +A
Sbjct: 287 -GQFRGFAYITYSMAGEAMRAF 307
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 199 IYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKAL 255
+ + L E + + YG+V V LPK K G+ +GFAF EFS+ EEA A
Sbjct: 642 LVIRNLAFECTKKEVRDLLKVYGEVKSVRLPK-KMNGQHRGFAFAEFSSAEEAKNAF 697
>gi|342878966|gb|EGU80243.1| hypothetical protein FOXB_09170 [Fusarium oxysporum Fo5176]
Length = 1079
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 199 IYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKAL 255
I++ L A ++ VFSKYG VT V+LP+ GK KGFAF++F+TKEEA KA+
Sbjct: 770 IHISNLDRTATEADLKEVFSKYGNVTRVNLPR-NLVGKTKGFAFIDFATKEEAEKAV 825
Score = 44.3 bits (103), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 195 DECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKA 254
++ T+YV PP A+ YI +F G++ + LP K + + F +V F +E +AKA
Sbjct: 675 NDLTVYVANYPPAADQKYIRDLFKDCGEILSIRLPSLKVDARRR-FCYVSFRDQEASAKA 733
Query: 255 LE 256
++
Sbjct: 734 VK 735
>gi|449672290|ref|XP_002167530.2| PREDICTED: lupus La protein homolog A-like [Hydra magnipapillata]
Length = 338
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 79/154 (51%), Gaps = 13/154 (8%)
Query: 109 LYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE-IEVSVFLKCNKLARLTHDPDDVVKAL 167
L ++I+ +E+Y D NL KD+F ++ +QE + I + +L +L+ D D++ AL
Sbjct: 16 LEKKIIRQIEYYFGDVNLPKDKFLNEKMQEDDKWITIECLTTFARLKQLSTDLDEIKNAL 75
Query: 168 RKSK--LLEVTEDGTKVRRT----VVVQDKPDV----DECTIYVEKLPPEAEHDYIESVF 217
+KS+ LLE+ E K+RR+ + D P + E T+Y++ P D + F
Sbjct: 76 KKSQSGLLEIHETEYKIRRSENHPLPDHDDPMIRKASKEKTLYMKGFPELFTIDDAQEFF 135
Query: 218 SKYG-KVTYVSLPKFKSTGKLKGFAFVEFSTKEE 250
K K ++ L K + K KG FVE T +E
Sbjct: 136 DKQNIKTVFIKLRK-DAEKKFKGSLFVEVGTLDE 168
Score = 40.4 bits (93), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE-IEVSVFLKCNKLARLTHDPDDVVKALRKSK--LL 57
+E+Y D NL KD+F ++ +QE + I + +L +L+ D D++ AL+KS+ LL
Sbjct: 24 IEYYFGDVNLPKDKFLNEKMQEDDKWITIECLTTFARLKQLSTDLDEIKNALKKSQSGLL 83
Query: 58 EVTEDGTKVK 67
E+ E K++
Sbjct: 84 EIHETEYKIR 93
>gi|428308134|ref|YP_007144959.1| RNP-1 like RNA-binding protein [Crinalium epipsammum PCC 9333]
gi|428249669|gb|AFZ15449.1| RNP-1 like RNA-binding protein [Crinalium epipsammum PCC 9333]
Length = 113
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%)
Query: 197 CTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
+IYV L E D + SVF++YG V V+LP + TG+ +GFAFVE T+++ A+E
Sbjct: 1 MSIYVGNLSYEVTEDDLNSVFAEYGTVKRVNLPNDRETGRPRGFAFVEMQTEDQENAAIE 60
>gi|328772947|gb|EGF82984.1| hypothetical protein BATDEDRAFT_21261 [Batrachochytrium
dendrobatidis JAM81]
Length = 416
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 54/102 (52%), Gaps = 2/102 (1%)
Query: 157 THDPDDVVKALRK--SKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIE 214
T+D V A+R+ LLE++EDG +RR + D +D TIYVE+L + I
Sbjct: 5 TNDEAIVAYAVRQYCVDLLEISEDGGSIRRKHPIPDYRQIDSRTIYVERLAHTSNEACIR 64
Query: 215 SVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
SVF +G++ V + K + G AFV F+ + + A++
Sbjct: 65 SVFQSFGEIEQVVMSKSIVSKGFPGCAFVVFAKADSTSLAID 106
>gi|298492825|ref|YP_003723002.1| RNP-1 like RNA-binding protein ['Nostoc azollae' 0708]
gi|298234743|gb|ADI65879.1| RNP-1 like RNA-binding protein ['Nostoc azollae' 0708]
Length = 101
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 39/60 (65%)
Query: 197 CTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
+IYV L + D ++ F++YGKV+ V LP + TG+L+GFAFVE T+++ A+E
Sbjct: 1 MSIYVGNLSYQVTEDDLKQAFAEYGKVSRVQLPTDRETGRLRGFAFVEMETEDQETAAIE 60
>gi|256085628|ref|XP_002579017.1| lupus la ribonucleoprotein [Schistosoma mansoni]
Length = 379
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 78/156 (50%), Gaps = 9/156 (5%)
Query: 109 LYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE-IEVSVFLKCNKLARLTHDPDDVVKAL 167
L +I+ +E+Y D NL +D+F + ++E+ I + +K N+L L+ D + + K++
Sbjct: 14 LESKIIRQVEYYFGDVNLSRDKFMKEAVKENDGWIPMETMIKFNRLKSLSEDAEFIKKSV 73
Query: 168 RKSK--LLEVTEDGTKVRRTVVVQDKPDV-----DECTIYVEKLPPEAEHDYIESVFSKY 220
KS+ L+EV E G + + V + + E +YV+ P+ + D I K+
Sbjct: 74 SKSQSGLIEVGEKGLRRNPEMKVPETFETALNSYKENGVYVKGFSPDEQLDEIIEWLEKH 133
Query: 221 GKVTY-VSLPKFKSTGKLKGFAFVEFSTKEEAAKAL 255
G T V + +F K +G F F KE++ K L
Sbjct: 134 GGKTLDVHMRRFPRDRKFRGSIFAIFEKKEDSEKFL 169
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 40/66 (60%), Gaps = 3/66 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE-IEVSVFLKCNKLARLTHDPDDVVKALRKSK--LL 57
+E+Y D NL +D+F + ++E+ I + +K N+L L+ D + + K++ KS+ L+
Sbjct: 22 VEYYFGDVNLSRDKFMKEAVKENDGWIPMETMIKFNRLKSLSEDAEFIKKSVSKSQSGLI 81
Query: 58 EVTEDG 63
EV E G
Sbjct: 82 EVGEKG 87
>gi|149022181|gb|EDL79075.1| Sjogren syndrome antigen B, isoform CRA_d [Rattus norvegicus]
Length = 134
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 62/113 (54%), Gaps = 10/113 (8%)
Query: 99 DGGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFF-SQLLQESPEIEVSVFLKCNKLARLT 157
+ G + L +I + +E+Y D NL +D+F Q+ + + + +K N+L RLT
Sbjct: 3 ENGDNEKMAALEAKICHQIEYYFGDFNLPRDKFLKEQIKLDEGWVPLETMIKFNRLNRLT 62
Query: 158 HDPDDVVKALRKSK--LLEVTEDGTKVRRT-------VVVQDKPDVDECTIYV 201
D + +V+AL KSK L+EV+ D TK+RR+ V + K DV ++Y+
Sbjct: 63 TDFNVIVQALSKSKANLMEVSADKTKIRRSPSRPLPEVTDEYKNDVKNRSVYI 115
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 44/70 (62%), Gaps = 3/70 (4%)
Query: 1 MEFYLSDSNLRKDRFF-SQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--LL 57
+E+Y D NL +D+F Q+ + + + +K N+L RLT D + +V+AL KSK L+
Sbjct: 21 IEYYFGDFNLPRDKFLKEQIKLDEGWVPLETMIKFNRLNRLTTDFNVIVQALSKSKANLM 80
Query: 58 EVTEDGTKVK 67
EV+ D TK++
Sbjct: 81 EVSADKTKIR 90
>gi|295659793|ref|XP_002790454.1| RNA-binding La domain-containing protein [Paracoccidioides sp.
'lutzii' Pb01]
gi|226281631|gb|EEH37197.1| RNA-binding La domain-containing protein [Paracoccidioides sp.
'lutzii' Pb01]
Length = 474
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 94/198 (47%), Gaps = 35/198 (17%)
Query: 86 DNVDKDLSDLQRKDGGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLL--QESPEIE 143
DN+ D+S L+ + RK+ +EFY SDSNL D+F + E+ +E
Sbjct: 131 DNIKSDVSTLKETNDPDEIRKQ---------VEFYFSDSNLVMDKFLLSKVGGSENRPVE 181
Query: 144 VSVFLKCNKLARLTHDP-DDVVKALRKSKLLEVTEDGTKVRRTVVVQD--KPDVD----- 195
+S+ ++ R P VV AL+ SK LE+T D T V+R + + + K VD
Sbjct: 182 LSLLHSFKRMRRFQ--PFSAVVDALKASKTLELTNDNTCVKRKIPLPEIVKESVDPTAVK 239
Query: 196 -------ECTIYVEKLPPEAEHDY--IESVFSKYGKVTYVSLPKFKSTGKL-KGFAFVEF 245
+ +IY + PE IE+ F+ YG + L ++ K+ KG FVEF
Sbjct: 240 VFEDRAMQRSIYAKGFGPEEPSTQFDIEAFFTPYGPTNAIRL--RRTPEKIFKGSVFVEF 297
Query: 246 STKEEAAKALELGLNPCP 263
+ EE KA L L+P P
Sbjct: 298 DS-EETQKAF-LALDPKP 313
Score = 37.7 bits (86), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 40/73 (54%), Gaps = 5/73 (6%)
Query: 1 MEFYLSDSNLRKDRFFSQLL--QESPEIEVSVFLKCNKLARLTHDP-DDVVKALRKSKLL 57
+EFY SDSNL D+F + E+ +E+S+ ++ R P VV AL+ SK L
Sbjct: 153 VEFYFSDSNLVMDKFLLSKVGGSENRPVELSLLHSFKRMRRFQ--PFSAVVDALKASKTL 210
Query: 58 EVTEDGTKVKGNI 70
E+T D T VK I
Sbjct: 211 ELTNDNTCVKRKI 223
>gi|318087022|gb|ADV40103.1| acheron [Latrodectus hesperus]
Length = 230
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 78/166 (46%), Gaps = 24/166 (14%)
Query: 113 IMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN--KLARLTHDPDDVVKALRKS 170
IM +E+YLSD+N+ KD F + ++ + E VS+ L + K+ L+ + V +++KS
Sbjct: 66 IMKTVEYYLSDANILKDPFLLKHVRRNKEGYVSLKLLASFRKVRSLSRNWKAVAYSIQKS 125
Query: 171 KLLEVTEDGTKVRRTVVVQDKPDVDECT----IYVEKLPPEAEH-DYIESVFSKYGKVTY 225
LL + DGTKVRR +Q PD DE T I V + D I +F+ G +
Sbjct: 126 TLLALNSDGTKVRR---LQPLPDYDETTNSRSIIVSGFSCDKPSVDSISEMFAHCGDIAL 182
Query: 226 VSL--PKFKSTGKLKGF------------AFVEFSTKEEAAKALEL 257
V + P +K F A VEF A KAL +
Sbjct: 183 VRILRPGGSIPSDVKRFLAKNPDIQAKISALVEFEEHAAAQKALRV 228
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN--KLARLTHDPDDVVKALRKSKLLE 58
+E+YLSD+N+ KD F + ++ + E VS+ L + K+ L+ + V +++KS LL
Sbjct: 70 VEYYLSDANILKDPFLLKHVRRNKEGYVSLKLLASFRKVRSLSRNWKAVAYSIQKSTLLA 129
Query: 59 VTEDGTKVK 67
+ DGTKV+
Sbjct: 130 LNSDGTKVR 138
>gi|167386428|ref|XP_001737750.1| lupus la ribonucleoprotein [Entamoeba dispar SAW760]
gi|165899323|gb|EDR25954.1| lupus la ribonucleoprotein, putative [Entamoeba dispar SAW760]
Length = 348
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 77/148 (52%), Gaps = 11/148 (7%)
Query: 113 IMNLMEFYLSDSNLRKDRFFSQLLQESPE-IEVSVFLKCNKLARLTHDPDDVVKALRKSK 171
I++ +EFY D NL +D F +++ S + + + K+ LT + ++++ AL KS
Sbjct: 4 ILDQIEFYFCDLNLIQDTFLKGVIETSNGFVTIDTLMGFVKVKELTENKEEIINALSKSS 63
Query: 172 LLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKF 231
LE++ED V+R + + ++++ +++++ +A I +K+ +V + +
Sbjct: 64 FLELSEDKQSVKRKTPLPTEEEINKRSLFIKGFGKDATRQEIIDALNKFAQVECIRM--- 120
Query: 232 KSTGKLK------GFAFVEFSTKEEAAK 253
+ G+ K G AFVEF T+ E K
Sbjct: 121 -NYGRNKEGQFYLGNAFVEFVTEAEKDK 147
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE-IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEV 59
+EFY D NL +D F +++ S + + + K+ LT + ++++ AL KS LE+
Sbjct: 8 IEFYFCDLNLIQDTFLKGVIETSNGFVTIDTLMGFVKVKELTENKEEIINALSKSSFLEL 67
Query: 60 TEDGTKVK 67
+ED VK
Sbjct: 68 SEDKQSVK 75
>gi|226291257|gb|EEH46685.1| RNA-binding La domain-containing protein [Paracoccidioides
brasiliensis Pb18]
Length = 474
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 93/198 (46%), Gaps = 35/198 (17%)
Query: 86 DNVDKDLSDLQRKDGGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLL--QESPEIE 143
DN+ D+S L+ RK+ +EFY SDSNL D+F + E+ +E
Sbjct: 131 DNIKSDVSTLKETSDPDEIRKQ---------VEFYFSDSNLVMDKFLLSKVGGSENKPVE 181
Query: 144 VSVFLKCNKLARLTHDP-DDVVKALRKSKLLEVTEDGTKVRRTVVVQD--KPDVD----- 195
+S+ ++ R P VV AL+ SK LE+T D T V+R + + + K VD
Sbjct: 182 LSLLHSFKRMRRFQ--PFSAVVDALKDSKTLELTNDNTCVKRKIPLPEIVKESVDPTAIK 239
Query: 196 -------ECTIYVEKLPPEAEHDY--IESVFSKYGKVTYVSLPKFKSTGKL-KGFAFVEF 245
+ +IY + PE IE+ F+ YG + L ++ K+ KG FVEF
Sbjct: 240 VFEDKAMQRSIYAKGFGPEEPSTQFDIEAFFTPYGPTNAIRL--RRTPEKIFKGSVFVEF 297
Query: 246 STKEEAAKALELGLNPCP 263
+ EE KA L L+P P
Sbjct: 298 DS-EETQKAF-LALDPKP 313
Score = 38.1 bits (87), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 40/73 (54%), Gaps = 5/73 (6%)
Query: 1 MEFYLSDSNLRKDRFFSQLL--QESPEIEVSVFLKCNKLARLTHDP-DDVVKALRKSKLL 57
+EFY SDSNL D+F + E+ +E+S+ ++ R P VV AL+ SK L
Sbjct: 153 VEFYFSDSNLVMDKFLLSKVGGSENKPVELSLLHSFKRMRRFQ--PFSAVVDALKDSKTL 210
Query: 58 EVTEDGTKVKGNI 70
E+T D T VK I
Sbjct: 211 ELTNDNTCVKRKI 223
>gi|123455020|ref|XP_001315258.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121897929|gb|EAY03035.1| hypothetical protein TVAG_143350 [Trichomonas vaginalis G3]
Length = 156
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 191 KPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEE 250
+ D +CT+YV L D +++VF KYG +T V +P+ + KGF FVEF +E+
Sbjct: 20 QEDKTKCTVYVGSLSWSTNEDGLKAVFEKYGNITSVRIPR-NDRDQSKGFGFVEFENEED 78
Query: 251 AAKALEL 257
A KA E+
Sbjct: 79 AKKACEM 85
>gi|428309319|ref|YP_007120296.1| RRM domain-containing RNA-binding protein [Microcoleus sp. PCC
7113]
gi|428250931|gb|AFZ16890.1| RRM domain-containing RNA-binding protein [Microcoleus sp. PCC
7113]
Length = 101
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 37/60 (61%)
Query: 197 CTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
+IYV L + + I VF++YG V V+LPK + TG+ +GFAFVE T EE A+E
Sbjct: 1 MSIYVGNLSYDVTEEDIREVFAEYGTVNNVTLPKDRETGRKRGFAFVEMGTDEEETAAIE 60
>gi|350854540|emb|CAZ35256.2| lupus la ribonucleoprotein, putative [Schistosoma mansoni]
Length = 372
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 78/156 (50%), Gaps = 9/156 (5%)
Query: 109 LYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE-IEVSVFLKCNKLARLTHDPDDVVKAL 167
L +I+ +E+Y D NL +D+F + ++E+ I + +K N+L L+ D + + K++
Sbjct: 7 LESKIIRQVEYYFGDVNLSRDKFMKEAVKENDGWIPMETMIKFNRLKSLSEDAEFIKKSV 66
Query: 168 RKSK--LLEVTEDGTKVRRTVVVQDKPDV-----DECTIYVEKLPPEAEHDYIESVFSKY 220
KS+ L+EV E G + + V + + E +YV+ P+ + D I K+
Sbjct: 67 SKSQSGLIEVGEKGLRRNPEMKVPETFETALNSYKENGVYVKGFSPDEQLDEIIEWLEKH 126
Query: 221 GKVTY-VSLPKFKSTGKLKGFAFVEFSTKEEAAKAL 255
G T V + +F K +G F F KE++ K L
Sbjct: 127 GGKTLDVHMRRFPRDRKFRGSIFAIFEKKEDSEKFL 162
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 40/66 (60%), Gaps = 3/66 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE-IEVSVFLKCNKLARLTHDPDDVVKALRKSK--LL 57
+E+Y D NL +D+F + ++E+ I + +K N+L L+ D + + K++ KS+ L+
Sbjct: 15 VEYYFGDVNLSRDKFMKEAVKENDGWIPMETMIKFNRLKSLSEDAEFIKKSVSKSQSGLI 74
Query: 58 EVTEDG 63
EV E G
Sbjct: 75 EVGEKG 80
>gi|411119198|ref|ZP_11391578.1| RRM domain-containing RNA-binding protein [Oscillatoriales
cyanobacterium JSC-12]
gi|410711061|gb|EKQ68568.1| RRM domain-containing RNA-binding protein [Oscillatoriales
cyanobacterium JSC-12]
Length = 104
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 39/60 (65%)
Query: 197 CTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
++YV L + D + FS+YGKV V LPK + TG+++GFAFVE S++ E A A++
Sbjct: 1 MSVYVGNLSFKVTEDDLVETFSEYGKVVSVQLPKDRETGRMRGFAFVEMSSETEEAAAID 60
>gi|195484702|ref|XP_002090800.1| GE12598 [Drosophila yakuba]
gi|194176901|gb|EDW90512.1| GE12598 [Drosophila yakuba]
Length = 390
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 80/159 (50%), Gaps = 15/159 (9%)
Query: 113 IMNLMEFYLSDSNLRKDRFFSQLL--QESPEIEVSVFLKCNKLARLTHDPDDVVKALRKS 170
I+ +E+Y D+NL +D+F + + E + +SV + +LA L+ D ++V AL KS
Sbjct: 54 IIRQVEYYFGDANLNRDKFLREQIGKNEDGWVPLSVLVTFKRLASLSTDLTEIVAALNKS 113
Query: 171 K--LLEVTEDGTKVRR-------TVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYG 221
+ L+E++ED +RR + + ++ E T Y + P +++ + + Y
Sbjct: 114 EEGLVEISEDKLSLRRHPERPIPEHNEERRKEIQERTAYAKGFPLDSQMSELLDFAANYE 173
Query: 222 KVTYVSLPKF----KSTGKLKGFAFVEFSTKEEAAKALE 256
KV +++ K + K KG F+ F TK +A LE
Sbjct: 174 KVVNLTMRKHYDKPTKSYKFKGSIFLTFETKAQAKAFLE 212
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 8/87 (9%)
Query: 1 MEFYLSDSNLRKDRFFSQLL--QESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--L 56
+E+Y D+NL +D+F + + E + +SV + +LA L+ D ++V AL KS+ L
Sbjct: 58 VEYYFGDANLNRDKFLREQIGKNEDGWVPLSVLVTFKRLASLSTDLTEIVAALNKSEEGL 117
Query: 57 LEVTEDGTKVKGNIIRHFLVPISMETE 83
+E++ED K ++ RH PI E
Sbjct: 118 VEISED----KLSLRRHPERPIPEHNE 140
>gi|366986841|ref|XP_003673187.1| hypothetical protein NCAS_0A02380 [Naumovozyma castellii CBS 4309]
gi|342299050|emb|CCC66796.1| hypothetical protein NCAS_0A02380 [Naumovozyma castellii CBS 4309]
Length = 272
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 79/165 (47%), Gaps = 20/165 (12%)
Query: 108 QLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE-IEVSVFLKCNKLARLTHDP-DDVVK 165
++ +Q + +EFY S+ N D+F +++ + +S N++ + + P D VV+
Sbjct: 23 EISKQCLKQVEFYFSEFNFPYDKFLRTTAEKNDGWVPISTIATFNRMKK--YRPVDKVVE 80
Query: 166 ALRKSKLLEVTEDGTKVRRTVV--------VQDKPDVDECTIYVEKLPPEAEHD------ 211
L+ SK+L+V+EDG V+R V + + + ++ T+ V P E E D
Sbjct: 81 LLKDSKILQVSEDGENVKRLVPLDLSKDKKIDKRMEQNKRTLAVMNFPVEVEGDDISELQ 140
Query: 212 -YIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKAL 255
IES F K GKV V L + K G VEF + EE L
Sbjct: 141 EQIESFFDKLGKVNQVRLRR-DHKKKFNGNVLVEFESLEECENFL 184
>gi|425461431|ref|ZP_18840909.1| putative RNA-binding protein rbpB [Microcystis aeruginosa PCC 9808]
gi|389825716|emb|CCI24327.1| putative RNA-binding protein rbpB [Microcystis aeruginosa PCC 9808]
Length = 100
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 39/60 (65%)
Query: 197 CTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
TIYV L + + ++ VF++YG V+ V LP + TGK++GF FVE S+ EE A A+E
Sbjct: 1 MTIYVGNLVYDVTTEALQEVFAEYGTVSRVYLPVDRETGKMRGFGFVEMSSDEEEAIAIE 60
>gi|25990819|gb|AAN76709.1|AF443827_1 acheron, partial [Manduca sexta]
Length = 395
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 86/173 (49%), Gaps = 28/173 (16%)
Query: 108 QLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN--KLARLTHDPDDVVK 165
+L +I++ +EFY SD+N+ KD F + ++ + E VS+ L + ++ LT D V +
Sbjct: 56 ELANRIVSQVEFYFSDANITKDAFLLKHVRRNKEGYVSLKLISSFKRVKHLTKDWRVVAE 115
Query: 166 ALRKSKLLEVTEDGTKVRRTVVVQDKPDVDEC----TIYVEKLP---PEAEHDYIESVFS 218
AL++S LE+ E GTK+RR + P DE T+ ++P P E+ + +F+
Sbjct: 116 ALKRSTKLEINELGTKLRR---IDPLPAYDETTPSRTVVAVRMPIERPSVEN--VSRLFA 170
Query: 219 KYGKVTYVSL--PKFKSTGKLKGF------------AFVEFSTKEEAAKALEL 257
G++ V + P ++ F A VEF+ E A +AL L
Sbjct: 171 GCGEIALVRVLRPGNPVPADVRQFLNKNPSLVNCVCALVEFTESEAAREALRL 223
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN--KLARLTHDPDDVVKALRKSKLLE 58
+EFY SD+N+ KD F + ++ + E VS+ L + ++ LT D V +AL++S LE
Sbjct: 65 VEFYFSDANITKDAFLLKHVRRNKEGYVSLKLISSFKRVKHLTKDWRVVAEALKRSTKLE 124
Query: 59 VTEDGTKVK 67
+ E GTK++
Sbjct: 125 INELGTKLR 133
>gi|291243678|ref|XP_002741728.1| PREDICTED: La autoantigen-like [Saccoglossus kowalevskii]
Length = 530
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 83/172 (48%), Gaps = 26/172 (15%)
Query: 108 QLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN--KLARLTHDPDDVVK 165
+L Q+I+ +EFY SD+N+ KD F + ++ + E VS+ L + K+ LT D V
Sbjct: 102 ELVQKIIKQVEFYFSDANIIKDAFLLKHVRRNKEGYVSLKLITSFKKMKSLTKDWKSVRF 161
Query: 166 ALRKSKLLEVTEDGTKVRRTVVVQDKPDVDEC----TIYVEKLP-PEAEHDYIESVFSKY 220
+L KS L + ++GTKV+R + P+ DE TI LP E + + +FSK
Sbjct: 162 SLEKSDKLVINKEGTKVKRINAL---PENDETTPSRTIVAVNLPMQEPSIEAVADLFSKC 218
Query: 221 GKVTYV-------SLP--------KFKSTGKLKGFAFVEFSTKEEAAKALEL 257
G + + SLP + GK A VEF E A KA EL
Sbjct: 219 GDIALIRILRPGKSLPQDVKKHQNQHPELGKTV-CALVEFEKSESARKAKEL 269
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN--KLARLTHDPDDVVKALRKSKLLE 58
+EFY SD+N+ KD F + ++ + E VS+ L + K+ LT D V +L KS L
Sbjct: 111 VEFYFSDANIIKDAFLLKHVRRNKEGYVSLKLITSFKKMKSLTKDWKSVRFSLEKSDKLV 170
Query: 59 VTEDGTKVK 67
+ ++GTKVK
Sbjct: 171 INKEGTKVK 179
>gi|324511465|gb|ADY44772.1| La-related protein CG11505, partial [Ascaris suum]
Length = 570
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 75/153 (49%), Gaps = 15/153 (9%)
Query: 103 RHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDD 162
R + + + QQ+ +E+Y S NL DRF + + + + K+ RLT+D +
Sbjct: 100 RPQPELIKQQLKAQLEYYFSRENLMTDRFLRCQMDNDQYVPIGIIAGFPKVKRLTNDFNL 159
Query: 163 VVKALRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGK 222
+V+ LR+S ++V E G +VR V + CTI + ++P + + S+FS G
Sbjct: 160 IVQVLRESTQVQVDELGERVR---AVSKR-----CTIILREIPESTDEKEVASMFS--GG 209
Query: 223 VTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKAL 255
Y+SL ++ L +V F ++E +A
Sbjct: 210 PPYISL-RY----GLNNSWYVTFESEEATQRAF 237
Score = 41.2 bits (95), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 37/68 (54%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEVT 60
+E+Y S NL DRF + + + + K+ RLT+D + +V+ LR+S ++V
Sbjct: 114 LEYYFSRENLMTDRFLRCQMDNDQYVPIGIIAGFPKVKRLTNDFNLIVQVLRESTQVQVD 173
Query: 61 EDGTKVKG 68
E G +V+
Sbjct: 174 ELGERVRA 181
>gi|307591599|ref|YP_003900398.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7822]
gi|306986453|gb|ADN18332.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7822]
Length = 109
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 33/52 (63%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKE 249
+IYV L E E ++ VFS YGKVT V +P + TG+ +GFAFVE T E
Sbjct: 2 SIYVGNLAFEVEDKHLSEVFSDYGKVTRVHIPTDRETGQRRGFAFVEMETAE 53
>gi|452848411|gb|EME50343.1| hypothetical protein DOTSEDRAFT_69017 [Dothistroma septosporum
NZE10]
Length = 516
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 38/67 (56%)
Query: 190 DKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKE 249
D P T++V + +A D + VF +YG + V LP + TG KGF +VEFS+ E
Sbjct: 354 DTPSQPSATLFVGNISFDATQDMVTEVFQEYGSINAVRLPTDRETGAPKGFGYVEFSSIE 413
Query: 250 EAAKALE 256
EA A+E
Sbjct: 414 EAKSAME 420
Score = 37.4 bits (85), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 35/59 (59%)
Query: 199 IYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALEL 257
++V L + +++ F ++G + V + + +G+ KG+ +VEF + ++AAKALE
Sbjct: 255 LFVGNLSWNVDEEWLTREFEEFGAIKAVRVITDRDSGRSKGYGYVEFESADDAAKALEA 313
>gi|307155022|ref|YP_003890406.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7822]
gi|306985250|gb|ADN17131.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7822]
Length = 109
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 36/60 (60%)
Query: 197 CTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
IYV L E E + VF++YG V V LP+ + TGK +GF FVE ST +E KA+E
Sbjct: 1 MAIYVGNLHYEVEEGELREVFAEYGTVRRVYLPEDRETGKKRGFGFVEMSTDDEEDKAIE 60
>gi|218189079|gb|EEC71506.1| hypothetical protein OsI_03788 [Oryza sativa Indica Group]
Length = 405
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 68/133 (51%), Gaps = 4/133 (3%)
Query: 108 QLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVK 165
+L +I+ +E+Y SD NL D F + ++++ + + + V ++ +L+ D +
Sbjct: 86 ELCDRIVKQVEYYFSDENLPTDEFLIKFVKKNKQGFVPIGVIASFRRMKKLSQDLSIIEA 145
Query: 166 ALRKSKLLEVTEDGTKVRRTVVVQDKP--DVDECTIYVEKLPPEAEHDYIESVFSKYGKV 223
ALR S L V+ DG +VRR + + DV + + VE LP + + I + F GK+
Sbjct: 146 ALRTSSKLVVSPDGKRVRRLHPLPNNELNDVKKRIVVVENLPSDFSMESIHAKFETVGKI 205
Query: 224 TYVSLPKFKSTGK 236
+++ S G+
Sbjct: 206 AKITIHDQHSVGE 218
Score = 37.7 bits (86), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
+E+Y SD NL D F + ++++ + + + V ++ +L+ D + ALR S L
Sbjct: 95 VEYYFSDENLPTDEFLIKFVKKNKQGFVPIGVIASFRRMKKLSQDLSIIEAALRTSSKLV 154
Query: 59 VTEDGTKVK 67
V+ DG +V+
Sbjct: 155 VSPDGKRVR 163
>gi|57899257|dbj|BAD87502.1| putative RNA-binding protein homolog [Oryza sativa Japonica Group]
Length = 405
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 70/140 (50%), Gaps = 4/140 (2%)
Query: 101 GGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTH 158
GG +L +I+ +E+Y SD NL D F + ++++ + + + V ++ +L+
Sbjct: 79 GGVVLTDELCDRIVKQVEYYFSDENLPTDEFLIKFVKKNKQGFVPIGVIASFRRMKKLSQ 138
Query: 159 DPDDVVKALRKSKLLEVTEDGTKVRRTVVVQDKP--DVDECTIYVEKLPPEAEHDYIESV 216
D + ALR S L V+ DG +VRR + + DV + + VE LP + + I +
Sbjct: 139 DLSIIEAALRTSSKLVVSPDGKRVRRLHPLPNNELNDVKKRIVVVENLPSDFSMESIHAK 198
Query: 217 FSKYGKVTYVSLPKFKSTGK 236
F GK+ +++ S G+
Sbjct: 199 FETVGKIAKITIHDQHSVGE 218
Score = 37.7 bits (86), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
+E+Y SD NL D F + ++++ + + + V ++ +L+ D + ALR S L
Sbjct: 95 VEYYFSDENLPTDEFLIKFVKKNKQGFVPIGVIASFRRMKKLSQDLSIIEAALRTSSKLV 154
Query: 59 VTEDGTKVK 67
V+ DG +V+
Sbjct: 155 VSPDGKRVR 163
>gi|464020|gb|AAA20518.1| La/SS-B [Drosophila melanogaster]
Length = 390
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 81/159 (50%), Gaps = 15/159 (9%)
Query: 113 IMNLMEFYLSDSNLRKDRFFSQLL--QESPEIEVSVFLKCNKLARLTHDPDDVVKALRKS 170
I+ +E+Y D+NL +D+F + + E + +SV + +LA L+ D ++V AL KS
Sbjct: 54 IIRQVEYYFGDANLNRDKFLREQIGKNEDGWVPLSVLVTFKRLASLSTDLSEIVAALNKS 113
Query: 171 K--LLEVTEDGTKVRR-------TVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYG 221
+ L+E++ED +RR + + ++ E T Y + P +++ + + Y
Sbjct: 114 EEGLVEISEDKLSLRRHPERPIPEHNEERRKEIQERTAYAKGFPLDSQISELLDFTANYD 173
Query: 222 KVTYVSL----PKFKSTGKLKGFAFVEFSTKEEAAKALE 256
KV +++ K + K KG F+ F TK++A LE
Sbjct: 174 KVVNLTMRNSYDKPTKSYKFKGSIFLTFETKDQAKAFLE 212
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 8/87 (9%)
Query: 1 MEFYLSDSNLRKDRFFSQLL--QESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--L 56
+E+Y D+NL +D+F + + E + +SV + +LA L+ D ++V AL KS+ L
Sbjct: 58 VEYYFGDANLNRDKFLREQIGKNEDGWVPLSVLVTFKRLASLSTDLSEIVAALNKSEEGL 117
Query: 57 LEVTEDGTKVKGNIIRHFLVPISMETE 83
+E++ED K ++ RH PI E
Sbjct: 118 VEISED----KLSLRRHPERPIPEHNE 140
>gi|303390645|ref|XP_003073553.1| small RNA-binding pol III transcript stabilizing-like protein
[Encephalitozoon intestinalis ATCC 50506]
gi|303302700|gb|ADM12193.1| small RNA-binding pol III transcript stabilizing-like protein
[Encephalitozoon intestinalis ATCC 50506]
Length = 296
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 78/152 (51%), Gaps = 9/152 (5%)
Query: 111 QQIMNLMEFYLSDSNLRKDRFF-SQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRK 169
++I + +EFY SD+N R D+F Q L I + + NKL L +DV KAL
Sbjct: 7 EKIKSQVEFYFSDANFRVDKFLREQSLVNDGYIPIKTIVSFNKLRNLEATVEDVKKALED 66
Query: 170 SKLLEVTEDGTKVRRT----VVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTY 225
SK++E+ +D K T V +K D+++ +Y++ +A + I+ + S + +
Sbjct: 67 SKVVELKDDMIKKVETEEYLSYVMEK-DINKRVVYIDGFEKDATLEDIKEILSPH--IIP 123
Query: 226 VSLPKFKSTGK-LKGFAFVEFSTKEEAAKALE 256
V + + GK G F E ++EEA KALE
Sbjct: 124 VLIRMRRDKGKNFSGSVFAELKSEEEAQKALE 155
Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 1 MEFYLSDSNLRKDRFF-SQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEV 59
+EFY SD+N R D+F Q L I + + NKL L +DV KAL SK++E+
Sbjct: 13 VEFYFSDANFRVDKFLREQSLVNDGYIPIKTIVSFNKLRNLEATVEDVKKALEDSKVVEL 72
Query: 60 TEDGTK 65
+D K
Sbjct: 73 KDDMIK 78
>gi|87301157|ref|ZP_01083998.1| RNA-binding protein RbpD [Synechococcus sp. WH 5701]
gi|87284125|gb|EAQ76078.1| RNA-binding protein RbpD [Synechococcus sp. WH 5701]
Length = 113
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 38/59 (64%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
TIYV L +AE + + +FS+YG+V SLP + TG+ +GFAFVE + E KA++
Sbjct: 2 TIYVGNLSFDAEQEDLRDLFSQYGEVRQCSLPLDRETGRKRGFAFVELANDAEEQKAID 60
>gi|189217543|ref|NP_001121234.1| uncharacterized protein LOC100158307 [Xenopus laevis]
gi|169642441|gb|AAI60739.1| LOC100158307 protein [Xenopus laevis]
Length = 480
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 84/177 (47%), Gaps = 28/177 (15%)
Query: 108 QLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN--KLARLTHDPDDVVK 165
+L Q+I++ +EFYLSD NL D F + +Q++ VS+ L + K+ LT D +
Sbjct: 78 KLVQKIVSQVEFYLSDENLSHDAFLLKHVQKNKMGYVSIKLLTSFKKIKSLTRDWRKTLY 137
Query: 166 ALRKSKLLEVTEDGTKVRRTVVVQD--------KPDVDECTIYVEKLPPEAEH----DYI 213
ALR S+ LEV E+ TKVRR + D K + Y EK + + +
Sbjct: 138 ALRFSEHLEVNEEETKVRRKKPLPDYLLGLSPTKQILAWNVFYPEKRSFSCQQKNTMEIV 197
Query: 214 ESVFSKYGKVTYVSL--PKFKSTGKLKGF------------AFVEFSTKEEAAKALE 256
S+F+ YG +T + + P + +K + A VE+ E A KALE
Sbjct: 198 NSLFATYGVITSIRILKPGKEVPSDIKKYMSRYPELSTKSCALVEYENLEGARKALE 254
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN--KLARLTHDPDDVVKALRKSKLLE 58
+EFYLSD NL D F + +Q++ VS+ L + K+ LT D + ALR S+ LE
Sbjct: 87 VEFYLSDENLSHDAFLLKHVQKNKMGYVSIKLLTSFKKIKSLTRDWRKTLYALRFSEHLE 146
Query: 59 VTEDGTKVK 67
V E+ TKV+
Sbjct: 147 VNEEETKVR 155
>gi|225679525|gb|EEH17809.1| RNA-binding La domain-containing protein [Paracoccidioides
brasiliensis Pb03]
Length = 474
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 93/198 (46%), Gaps = 35/198 (17%)
Query: 86 DNVDKDLSDLQRKDGGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLL--QESPEIE 143
DN+ D+S L+ RK+ +EFY SDSNL D+F + E+ +E
Sbjct: 131 DNIKSDVSTLKETSDPDEIRKQ---------VEFYFSDSNLVMDKFLLSKVGGSENRPVE 181
Query: 144 VSVFLKCNKLARLTHDP-DDVVKALRKSKLLEVTEDGTKVRRTVVVQD--KPDVD----- 195
+S+ ++ R P VV AL+ SK LE+T D T V+R + + + K VD
Sbjct: 182 LSLLHSFKRMRRFQ--PFSAVVDALKDSKTLELTNDNTCVKRKIPLPEIVKESVDPTAIK 239
Query: 196 -------ECTIYVEKLPPEAEHDY--IESVFSKYGKVTYVSLPKFKSTGKL-KGFAFVEF 245
+ +IY + PE IE+ F+ YG + L ++ K+ KG FVEF
Sbjct: 240 VFEDKAMQRSIYAKGFGPEEPSTQFDIEAFFTPYGPTNAIRL--RRTPEKIFKGSVFVEF 297
Query: 246 STKEEAAKALELGLNPCP 263
+ EE KA L L+P P
Sbjct: 298 DS-EETQKAF-LALDPKP 313
Score = 37.7 bits (86), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 40/73 (54%), Gaps = 5/73 (6%)
Query: 1 MEFYLSDSNLRKDRFFSQLL--QESPEIEVSVFLKCNKLARLTHDP-DDVVKALRKSKLL 57
+EFY SDSNL D+F + E+ +E+S+ ++ R P VV AL+ SK L
Sbjct: 153 VEFYFSDSNLVMDKFLLSKVGGSENRPVELSLLHSFKRMRRFQ--PFSAVVDALKDSKTL 210
Query: 58 EVTEDGTKVKGNI 70
E+T D T VK I
Sbjct: 211 ELTNDNTCVKRKI 223
>gi|215398877|gb|ACJ65686.1| archeron-like protein [Haliotis discus discus]
Length = 251
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 71/130 (54%), Gaps = 14/130 (10%)
Query: 108 QLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN--KLARLTHDPDDVVK 165
+L ++I+ +EFY D N+ KD F + ++ + VS+ L + KL LT D V
Sbjct: 99 ELKEKIIKQVEFYFCDVNILKDAFLLKHVRRNKLGYVSLKLITSFKKLKSLTKDYRVVAY 158
Query: 166 ALRKSKLLEVTEDGTKVRRTVVVQDKPDVDEC----TIYVEKLPPEAEHDYIESV---FS 218
+LR+S LEV E+GTKVRR V+ P+ DE T+ LP E+ IE+V FS
Sbjct: 159 SLRESDKLEVNEEGTKVRR---VEPLPEYDETTPSRTVVAVNLP--TENPTIETVAEIFS 213
Query: 219 KYGKVTYVSL 228
K G+V + +
Sbjct: 214 KCGEVVLIRV 223
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN--KLARLTHDPDDVVKALRKSKLLE 58
+EFY D N+ KD F + ++ + VS+ L + KL LT D V +LR+S LE
Sbjct: 108 VEFYFCDVNILKDAFLLKHVRRNKLGYVSLKLITSFKKLKSLTKDYRVVAYSLRESDKLE 167
Query: 59 VTEDGTKVK 67
V E+GTKV+
Sbjct: 168 VNEEGTKVR 176
>gi|332018759|gb|EGI59324.1| La protein-like protein [Acromyrmex echinatior]
Length = 443
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 75/152 (49%), Gaps = 14/152 (9%)
Query: 109 LYQQIMNLMEFYLSDSNLRKDRFF-SQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKAL 167
L +I +E+Y + N+++D+F Q + I +++ L LA L+ D D ++KAL
Sbjct: 84 LLAKIKTQIEYYFGNVNMQRDKFLIEQTKLDEGWIPMTIMLNFKMLAALSKDVDVILKAL 143
Query: 168 RKSKLLEVTEDGTKVRRTVVVQDKPDVDEC--------TIYVEKLP-PEAEHDYIESVFS 218
S L+E++ED K+RR+ P+ +E T+YV+ P D ++ F
Sbjct: 144 ETSDLMEISEDKKKIRRS-PKHPLPEYNEGYRKAQEARTVYVKGFPFTNTTIDKLKVFFE 202
Query: 219 KYGKVTYVSLPKFKSTGKL---KGFAFVEFST 247
Y + + K++ K+ KG FV+F T
Sbjct: 203 PYKPFETIVMRKYQDKDKVLKFKGSVFVQFET 234
Score = 43.9 bits (102), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 1 MEFYLSDSNLRKDRFF-SQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEV 59
+E+Y + N+++D+F Q + I +++ L LA L+ D D ++KAL S L+E+
Sbjct: 92 IEYYFGNVNMQRDKFLIEQTKLDEGWIPMTIMLNFKMLAALSKDVDVILKALETSDLMEI 151
Query: 60 TEDGTKVK 67
+ED K++
Sbjct: 152 SEDKKKIR 159
>gi|125572070|gb|EAZ13585.1| hypothetical protein OsJ_03502 [Oryza sativa Japonica Group]
Length = 389
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 70/140 (50%), Gaps = 4/140 (2%)
Query: 101 GGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTH 158
GG +L +I+ +E+Y SD NL D F + ++++ + + + V ++ +L+
Sbjct: 79 GGVVLTDELCDRIVKQVEYYFSDENLPTDEFLIKFVKKNKQGFVPIGVIASFRRMKKLSQ 138
Query: 159 DPDDVVKALRKSKLLEVTEDGTKVRRTVVVQDKP--DVDECTIYVEKLPPEAEHDYIESV 216
D + ALR S L V+ DG +VRR + + DV + + VE LP + + I +
Sbjct: 139 DLSIIEAALRTSSKLVVSPDGKRVRRLHPLPNNELNDVKKRIVVVENLPSDFSMESIHAK 198
Query: 217 FSKYGKVTYVSLPKFKSTGK 236
F GK+ +++ S G+
Sbjct: 199 FETVGKIAKITIHDQHSVGE 218
Score = 37.7 bits (86), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
+E+Y SD NL D F + ++++ + + + V ++ +L+ D + ALR S L
Sbjct: 95 VEYYFSDENLPTDEFLIKFVKKNKQGFVPIGVIASFRRMKKLSQDLSIIEAALRTSSKLV 154
Query: 59 VTEDGTKVK 67
V+ DG +V+
Sbjct: 155 VSPDGKRVR 163
>gi|115477601|ref|NP_001062396.1| Os08g0542900 [Oryza sativa Japonica Group]
gi|42407839|dbj|BAD08982.1| putative RNA recognition motif (RRM)-containing protein [Oryza
sativa Japonica Group]
gi|113624365|dbj|BAF24310.1| Os08g0542900 [Oryza sativa Japonica Group]
gi|215704320|dbj|BAG93754.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218201546|gb|EEC83973.1| hypothetical protein OsI_30107 [Oryza sativa Indica Group]
gi|222640954|gb|EEE69086.1| hypothetical protein OsJ_28141 [Oryza sativa Japonica Group]
Length = 427
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 76/168 (45%), Gaps = 21/168 (12%)
Query: 109 LYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKA 166
+ ++++ +EFY SD NL + + PE + +SV K+ L + +
Sbjct: 107 VARRVVKQVEFYFSDVNLATTEHLMKFMIRDPEGFVPMSVVASFRKIRELVSERSALAAV 166
Query: 167 LRKSKLLEVTEDGTKVRRTVVV--QDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVT 224
LR S L V++DG +VRR V+ D +V + E L E + + +FS +G V
Sbjct: 167 LRTSAELVVSDDGKRVRRRVLFTEADAEEVQSRIVVAENLREEHRYPNLMKIFSAFGSVK 226
Query: 225 YV--SLPK------FKSTGKL---------KGFAFVEFSTKEEAAKAL 255
+ P+ STGK K AFVE+ T E+A KA+
Sbjct: 227 SIRTCYPQGGIDGAGTSTGKASKIEMLFANKVHAFVEYETVEDAEKAV 274
>gi|119631661|gb|EAX11256.1| Sjogren syndrome antigen B (autoantigen La), isoform CRA_a [Homo
sapiens]
Length = 344
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 147 FLKCNKLARLTHDPDDVVKALRKSK--LLEVTEDGTKVRRT-------VVVQDKPDVDEC 197
+K N+L RLT D + +V+AL KSK L+E++ED TK+RR+ V + K DV
Sbjct: 1 MIKFNRLNRLTTDFNVIVEALSKSKAELMEISEDKTKIRRSPSKPLPEVTDEYKNDVKNR 60
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
++Y++ P +A D I+ G+V + + + KG FV F + E A K +E
Sbjct: 61 SVYIKGFPTDATLDDIKEWLEDKGQVLNIQMRRTLHKA-FKGSIFVVFDSIESAKKFVE 118
>gi|403337850|gb|EJY68149.1| La domain containing protein [Oxytricha trifallax]
Length = 379
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 47/76 (61%), Gaps = 4/76 (5%)
Query: 113 IMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALR-- 168
I +E+YLSDSNL DR+F ++ +PE ++++ L CNK+ ++ + ++
Sbjct: 8 IKKQIEYYLSDSNLSHDRYFHDKIESNPEGWLDIAEILNCNKIKKMKITEKQIADSINAG 67
Query: 169 KSKLLEVTEDGTKVRR 184
S+L+EV+ DG +VRR
Sbjct: 68 ASELVEVSADGKRVRR 83
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALR--KSKL 56
+E+YLSDSNL DR+F ++ +PE ++++ L CNK+ ++ + ++ S+L
Sbjct: 12 IEYYLSDSNLSHDRYFHDKIESNPEGWLDIAEILNCNKIKKMKITEKQIADSINAGASEL 71
Query: 57 LEVTEDGTKVK 67
+EV+ DG +V+
Sbjct: 72 VEVSADGKRVR 82
>gi|434389333|ref|YP_007099944.1| RRM domain-containing RNA-binding protein [Chamaesiphon minutus PCC
6605]
gi|428020323|gb|AFY96417.1| RRM domain-containing RNA-binding protein [Chamaesiphon minutus PCC
6605]
Length = 93
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 27/59 (45%), Positives = 36/59 (61%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
+IYV L E D + F++YGKV V LP + TG+L+GFAFVE T E + A+E
Sbjct: 2 SIYVGNLSYEVTQDDLTQTFAEYGKVKRVQLPTDRETGRLRGFAFVEMETDAEESAAIE 60
>gi|354568213|ref|ZP_08987379.1| RNP-1 like RNA-binding protein [Fischerella sp. JSC-11]
gi|353541178|gb|EHC10648.1| RNP-1 like RNA-binding protein [Fischerella sp. JSC-11]
Length = 103
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 42/61 (68%), Gaps = 2/61 (3%)
Query: 194 VDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFS--TKEEA 251
V + TIYV L A + +++VF++YG+V V LP + TG+L+GFAFVE + T+EEA
Sbjct: 9 VIQMTIYVGNLSYSATEEDLKAVFAEYGQVKRVVLPTDRDTGRLRGFAFVEMNEDTQEEA 68
Query: 252 A 252
A
Sbjct: 69 A 69
>gi|411119813|ref|ZP_11392189.1| RRM domain-containing RNA-binding protein [Oscillatoriales
cyanobacterium JSC-12]
gi|410709969|gb|EKQ67480.1| RRM domain-containing RNA-binding protein [Oscillatoriales
cyanobacterium JSC-12]
Length = 90
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 32/61 (52%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEF-STKEEAAKALE 256
TIYV L +AE + I VFS+YGKV+ VSLP + TG+ +GFAFV+ S EE A E
Sbjct: 2 TIYVGNLSFQAEEEDIREVFSEYGKVSRVSLPTDRETGRKRGFAFVDMESDAEEDAAIAE 61
Query: 257 L 257
L
Sbjct: 62 L 62
>gi|255084900|ref|XP_002504881.1| predicted protein [Micromonas sp. RCC299]
gi|226520150|gb|ACO66139.1| predicted protein [Micromonas sp. RCC299]
Length = 85
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 37/57 (64%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKA 254
++ V +LPP+A + +E FSKYGKV V +P+ T + KG AFV+F EEAA A
Sbjct: 1 SLLVRQLPPDARAEELEEAFSKYGKVIDVYIPRDYYTKRPKGIAFVQFPNPEEAADA 57
>gi|443328295|ref|ZP_21056895.1| RRM domain-containing RNA-binding protein [Xenococcus sp. PCC 7305]
gi|442792141|gb|ELS01628.1| RRM domain-containing RNA-binding protein [Xenococcus sp. PCC 7305]
Length = 96
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/59 (45%), Positives = 38/59 (64%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
+IYV L E + IE VF++YG + V LP + TG+ +GFAFVE S++ E KA+E
Sbjct: 2 SIYVGNLSYEVTKEDIEEVFNEYGTIKRVHLPTDRETGRFRGFAFVEMSSEAEETKAIE 60
>gi|356507883|ref|XP_003522692.1| PREDICTED: uncharacterized protein LOC100803099 [Glycine max]
Length = 488
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 19/137 (13%)
Query: 111 QQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKC--NKLARLTH----DPDD-- 162
++++ +EFY DSNL D F + + ES + +S+ L C N++ + + PD+
Sbjct: 12 KKVIRQVEFYFGDSNLLTDGFMRKSITESEDGMISLALICSFNRMRKHLNLGDVKPDEVA 71
Query: 163 ------VVKALRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDY---- 212
V + LR S L+V+EDG KV R + DV++ I + P E+D
Sbjct: 72 QETVNTVAQTLRNSASLKVSEDGKKVGRKTELPKLEDVEQVEIRTLAVSP-FEYDLKLED 130
Query: 213 IESVFSKYGKVTYVSLP 229
+E F +Y KV V LP
Sbjct: 131 VEKFFGQYAKVNSVRLP 147
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 14/80 (17%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKC--NKLARLTH----DPDD-------- 46
+EFY DSNL D F + + ES + +S+ L C N++ + + PD+
Sbjct: 18 VEFYFGDSNLLTDGFMRKSITESEDGMISLALICSFNRMRKHLNLGDVKPDEVAQETVNT 77
Query: 47 VVKALRKSKLLEVTEDGTKV 66
V + LR S L+V+EDG KV
Sbjct: 78 VAQTLRNSASLKVSEDGKKV 97
>gi|242085268|ref|XP_002443059.1| hypothetical protein SORBIDRAFT_08g007220 [Sorghum bicolor]
gi|241943752|gb|EES16897.1| hypothetical protein SORBIDRAFT_08g007220 [Sorghum bicolor]
Length = 489
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 75/168 (44%), Gaps = 20/168 (11%)
Query: 108 QLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVK 165
++ +I +E+Y SD NL + + + PE + +SV K+ H+ +
Sbjct: 134 EVVHKITKQVEYYFSDINLATTEHLMRFITKDPEGYVPISVIAGFKKVKASVHNNVMLAA 193
Query: 166 ALRKSKLLEVTEDGTKVRR--TVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKV 223
ALR S L V++DG +V+R D ++ + E LP + + ++ +FS G V
Sbjct: 194 ALRTSSKLVVSDDGKRVKRQEPFTESDLQELQSRIVVAENLPGDPSYQNLKKIFSAVGSV 253
Query: 224 TYV----------SLPKFKSTGKL------KGFAFVEFSTKEEAAKAL 255
+ + P + KL K AFVE+ T E+A KA+
Sbjct: 254 ISIRTCYPQTPNGTGPATNRSAKLDMLFANKLHAFVEYETPEDAEKAI 301
Score = 37.0 bits (84), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
+E+Y SD NL + + + PE + +SV K+ H+ + ALR S L
Sbjct: 143 VEYYFSDINLATTEHLMRFITKDPEGYVPISVIAGFKKVKASVHNNVMLAAALRTSSKLV 202
Query: 59 VTEDGTKVK 67
V++DG +VK
Sbjct: 203 VSDDGKRVK 211
>gi|312383017|gb|EFR28258.1| hypothetical protein AND_04034 [Anopheles darlingi]
Length = 402
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 81/162 (50%), Gaps = 18/162 (11%)
Query: 113 IMNLMEFYLSDSNLRKDRFFSQLLQE-SPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK 171
I+ +E+Y D+NL KD+F + ++E + + + V L +L L+ D +V A+ KS
Sbjct: 31 IIRQLEYYFGDANLLKDKFLKEKIKEDNGWVTLDVLLSFKRLKALSEDKKVIVDAIEKST 90
Query: 172 --LLEVTEDGTKVRRTVVVQDKPDVDE--------CTIYVEKLPPEAEHDYIESV--FSK 219
L+EV+ED K+RR + P++DE T+YV+ P+ E V F
Sbjct: 91 EGLIEVSEDREKLRRH-PERPLPELDEETRKEIYTRTVYVKGFAPQDGTSMNELVEFFQP 149
Query: 220 YGKVTYVSLPKF--KSTGK--LKGFAFVEFSTKEEAAKALEL 257
Y KV + + K+ K T K KG FV F E+ K L +
Sbjct: 150 YDKVVNIVMRKYHDKPTKKYLFKGSVFVTFVNTEQCEKFLAI 191
Score = 40.4 bits (93), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 46/81 (56%), Gaps = 7/81 (8%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQE-SPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--LL 57
+E+Y D+NL KD+F + ++E + + + V L +L L+ D +V A+ KS L+
Sbjct: 35 LEYYFGDANLLKDKFLKEKIKEDNGWVTLDVLLSFKRLKALSEDKKVIVDAIEKSTEGLI 94
Query: 58 EVTEDGTKVKGNIIRHFLVPI 78
EV+ED K++ RH P+
Sbjct: 95 EVSEDREKLR----RHPERPL 111
>gi|321464387|gb|EFX75395.1| sex-lethal protein variant 2 [Daphnia pulex]
Length = 297
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 161 DDVVKALRKSKLLEVTEDGTKVRRTVVVQDKP---DVDECTIYVEKLPPEAEHDYIESVF 217
DD ++A++ L++ +R V +P D E +YV LP + D + ++F
Sbjct: 79 DDAIRAIQTLNGLQIQN-----KRIKVSYARPPGEDRKETNLYVTNLPRDVTEDELTNIF 133
Query: 218 SKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
S +G + ++L K K TG +G AFV F +EEA A+E
Sbjct: 134 SAHGNIVQMNLLKDKITGMPRGVAFVRFDKREEALAAIE 172
>gi|428214973|ref|YP_007088117.1| RRM domain-containing RNA-binding protein [Oscillatoria acuminata
PCC 6304]
gi|428003354|gb|AFY84197.1| RRM domain-containing RNA-binding protein [Oscillatoria acuminata
PCC 6304]
Length = 106
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 39/59 (66%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
+IYV L E + + +VF++YG V V+LP + TG+++GFAFVE +T+ E A+E
Sbjct: 2 SIYVGNLSYEVTQEDLNAVFAEYGSVKRVNLPTDRETGRVRGFAFVEMATETEETAAIE 60
>gi|302914164|ref|XP_003051083.1| hypothetical protein NECHADRAFT_10800 [Nectria haematococca mpVI
77-13-4]
gi|256732021|gb|EEU45370.1| hypothetical protein NECHADRAFT_10800 [Nectria haematococca mpVI
77-13-4]
Length = 1061
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 199 IYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKAL 255
+++ L A ++ VFSKYGKVT V +P+ S GK KGFAF++F TKEEA KA+
Sbjct: 770 VHISNLDRTASEADLKGVFSKYGKVTRVKVPQTLS-GKNKGFAFIDFETKEEAEKAV 825
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 196 ECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKAL 255
+ T+YV PP A+ YI ++F G++ V P K + F ++ F +E +A A+
Sbjct: 676 DLTVYVANFPPVADEAYIRNLFKDCGEILSVRWPSLKVNSHRR-FCYISFRDREASANAV 734
>gi|218438077|ref|YP_002376406.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7424]
gi|218170805|gb|ACK69538.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7424]
Length = 96
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 37/58 (63%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKAL 255
+IYV LP E E +I VF+ YG+V V +P + TG+ +GFAFVE T+ + A A+
Sbjct: 2 SIYVGNLPFEVEEKHINDVFADYGQVKRVYMPVDRETGRRRGFAFVEMETQSQEASAI 59
>gi|70995748|ref|XP_752629.1| RNA-binding La domain protein [Aspergillus fumigatus Af293]
gi|42820664|emb|CAF31977.1| la protein homolog, putative [Aspergillus fumigatus]
gi|66850264|gb|EAL90591.1| RNA-binding La domain protein [Aspergillus fumigatus Af293]
gi|159131382|gb|EDP56495.1| RNA-binding La domain protein [Aspergillus fumigatus A1163]
Length = 398
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 80/172 (46%), Gaps = 22/172 (12%)
Query: 110 YQQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSV-FLKCNKLARLTHDPDDVVKALR 168
+ +I +EFY SDSNL D+F + S V + L K R +V+AL+
Sbjct: 111 HDEIRKQVEFYFSDSNLPMDKFLLSKVGGSSNRPVPLELLHSFKRMRRFQPFSAIVEALK 170
Query: 169 KSKLLEVTEDGTKVRRTV----VVQDKPDVDECTIYVEKL-------------PPEAEHD 211
SK LE+T++ T VRR V V +KPD ++ ++ P + D
Sbjct: 171 SSKTLELTDNDTCVRRKVPLPESVTEKPDPSVTKVFEDQAMSRSIYAKGFGEETPTTQID 230
Query: 212 YIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNPCP 263
IE+ F+ YG V + L + KG FVEF+T EE K L L+P P
Sbjct: 231 -IEAFFAPYGPVNAIRLRRTHDR-IFKGSVFVEFAT-EEKQKEF-LALDPKP 278
>gi|194477264|ref|YP_002049443.1| RNA-binding protein RbpD [Paulinella chromatophora]
gi|171192271|gb|ACB43233.1| RNA-binding protein RbpD [Paulinella chromatophora]
Length = 132
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 41/60 (68%)
Query: 197 CTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
+IYV L +AE + ++ +F++YG V+ VSLP + TG+ +GFAFVE + + + KA++
Sbjct: 1 MSIYVGNLSFDAEQEDLQGLFAQYGDVSKVSLPLDRETGRKRGFAFVEMANEADEQKAID 60
>gi|118404650|ref|NP_001072636.1| La ribonucleoprotein domain family, member 6 [Xenopus (Silurana)
tropicalis]
gi|114108041|gb|AAI23090.1| acheron [Xenopus (Silurana) tropicalis]
Length = 481
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 85/186 (45%), Gaps = 46/186 (24%)
Query: 108 QLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN--KLARLTHDPDDVVK 165
+L ++I++ +EFYLSD NL D F + +Q++ VS+ L + K+ LT D +
Sbjct: 78 KLVRKIVSQVEFYLSDENLSHDAFLLKHVQKNKMGYVSIKLLTSFKKIKYLTRDWRKTLY 137
Query: 166 ALRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAE---------------- 209
ALR S+ LEV E+ TKVRR + D Y+ LPP +
Sbjct: 138 ALRFSEQLEVNEEETKVRRKNPLPD---------YLLGLPPTKQLLVWNISDPEKRSFSC 188
Query: 210 -----HDYIESVFSKYGKVTYVSL--PKFKSTGKLKGF------------AFVEFSTKEE 250
+ + SVF+ YG +T + + P + ++ + A VE+ + E
Sbjct: 189 QQKNLMEIVTSVFATYGLITSIRILKPGKEVPSDIRKYMSRYPELSTRNCALVEYESLEG 248
Query: 251 AAKALE 256
A KALE
Sbjct: 249 ARKALE 254
Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN--KLARLTHDPDDVVKALRKSKLLE 58
+EFYLSD NL D F + +Q++ VS+ L + K+ LT D + ALR S+ LE
Sbjct: 87 VEFYLSDENLSHDAFLLKHVQKNKMGYVSIKLLTSFKKIKYLTRDWRKTLYALRFSEQLE 146
Query: 59 VTEDGTKVK 67
V E+ TKV+
Sbjct: 147 VNEEETKVR 155
>gi|356502734|ref|XP_003520171.1| PREDICTED: uncharacterized protein LOC100808205 [Glycine max]
Length = 404
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 79/162 (48%), Gaps = 14/162 (8%)
Query: 109 LYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKA 166
L Q+I+ +E+ SD +L + F + + + PE + ++V K+ L + + + +A
Sbjct: 97 LQQKIVKQVEYQFSDMSLLANESFHKQMNKDPEGYVPITVIASTKKVKSLVSNINMLTQA 156
Query: 167 LRKSKLLEVTEDGTKVRR--TVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVT 224
+R S L ++ DG KV+R ++K D+ T+ E LP + H ++ +F G V
Sbjct: 157 IRSSSKLVLSVDGKKVKRKHPYTEKEKEDLLARTVVAENLPDDHSHQNLQKIFGIVGSVK 216
Query: 225 YVSL--PKFKSTGKLKG--------FAFVEFSTKEEAAKALE 256
+ + P+ ++ + K A VE+ T + A KA E
Sbjct: 217 TIRICHPQEPNSSRPKSDFIVSNKLHALVEYETSDIAEKAAE 258
>gi|443708578|gb|ELU03655.1| hypothetical protein CAPTEDRAFT_219142 [Capitella teleta]
Length = 774
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 188 VQDKPDVDEC-TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFS 246
V K D +E T++V L E+E + + +FS+ G V Y + K TGK +G FV++S
Sbjct: 365 VSGKSDTEEGRTLFVRNLSFESEEEDMYELFSELGDVVYCRITMNKETGKSRGTGFVQYS 424
Query: 247 TKEEAAKALELGLNPCP 263
+KE+A K LE+ +P P
Sbjct: 425 SKEDADKCLEVANDPGP 441
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 43/85 (50%), Gaps = 8/85 (9%)
Query: 179 GTKVRRT--VVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLP----KFK 232
G K+R V Q P I V L + D + F K+GK+ V +P K K
Sbjct: 129 GQKIRAVHGVATQASPSSKVSRIIVRNLSFKCTEDILREKFQKFGKILEVKIPLKGDKAK 188
Query: 233 STGKLKGFAFVEFSTKEEAAKALEL 257
+T +KGFAFV+F T EEA ALE+
Sbjct: 189 NT--MKGFAFVQFETVEEAQAALEM 211
>gi|412993610|emb|CCO14121.1| predicted protein [Bathycoccus prasinos]
Length = 476
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 89/168 (52%), Gaps = 21/168 (12%)
Query: 107 KQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPD--- 161
++L ++++ +EFY SDSNL +D+F + ++ P+ +++ + LK ++ + +D
Sbjct: 49 EKLERKLLRQLEFYFSDSNLPRDKFLRETVERDPDAYVDLKLILKFQRMRDILNDSGGSN 108
Query: 162 --DVVKAL-----RKSKLLEVTEDGT---KVRRTVVVQDKP----DVDECTIYVEKLPPE 207
+VV+A+ KS L+V E+ + +VRR ++ K DV++ ++Y P
Sbjct: 109 NPEVVEAVAKLLKEKSVSLQVAEETSPDPRVRRKEDLRPKEEIDRDVEKRSLYANPFPMT 168
Query: 208 AEHDYIESVFSKY--GKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAK 253
A + + F K +V V L + ++ KG FVEFS++E A K
Sbjct: 169 ATIESLTDFFEKECDERVLSVRLRRHIASKDFKGSIFVEFSSEESAKK 216
>gi|254432360|ref|ZP_05046063.1| RNA-binding protein RbpD [Cyanobium sp. PCC 7001]
gi|197626813|gb|EDY39372.1| RNA-binding protein RbpD [Cyanobium sp. PCC 7001]
Length = 105
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 39/59 (66%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
TIYV L +AE D ++ +FS+YG V +LP + TG+ +GFAFVE + + + KA++
Sbjct: 2 TIYVGNLSFDAEVDDVQHLFSEYGDVRKCTLPLDRDTGRKRGFAFVEMANEADETKAID 60
>gi|407040603|gb|EKE40222.1| La domain containing protein [Entamoeba nuttalli P19]
Length = 352
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 77/148 (52%), Gaps = 11/148 (7%)
Query: 113 IMNLMEFYLSDSNLRKDRFFSQLLQESPE-IEVSVFLKCNKLARLTHDPDDVVKALRKSK 171
I++ +EFY D NL +D F +++ S + + + K+ LT + ++++ AL KS
Sbjct: 4 ILDQIEFYFCDLNLIQDTFLKGVIETSNGFVTIDTLMGFVKVKELTENKEEIINALSKSS 63
Query: 172 LLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKF 231
LE++ED V+R + + ++++ +++++ +A I +K+ +V + +
Sbjct: 64 FLELSEDKQSVKRKTPLPTEEEINKRSLFIKGFGKDATRQEIIDALNKFAQVECIRM--- 120
Query: 232 KSTGKLK------GFAFVEFSTKEEAAK 253
+ G+ K G AFVEF ++ E K
Sbjct: 121 -NYGRNKEGQFYLGNAFVEFVSEAEKDK 147
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE-IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEV 59
+EFY D NL +D F +++ S + + + K+ LT + ++++ AL KS LE+
Sbjct: 8 IEFYFCDLNLIQDTFLKGVIETSNGFVTIDTLMGFVKVKELTENKEEIINALSKSSFLEL 67
Query: 60 TEDGTKVK 67
+ED VK
Sbjct: 68 SEDKQSVK 75
>gi|255647422|gb|ACU24176.1| unknown [Glycine max]
Length = 363
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 72/149 (48%), Gaps = 19/149 (12%)
Query: 107 KQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKC--NKLARLTH----DP 160
++ ++++ +EFY DSNL D F + + ES + +S+ L C N++ + + P
Sbjct: 8 EETTKKVIRQVEFYFGDSNLLTDGFMRKSITESEDGMISLALICSFNRMRKHLNLGDVKP 67
Query: 161 DD--------VVKALRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDY 212
D+ V + LR S L+V+EDG KV R + DV++ I + P E+D
Sbjct: 68 DEVAQETVNTVAQTLRNSASLKVSEDGKKVGRKTELPKLEDVEQVEIRTLAVSP-FEYDL 126
Query: 213 ----IESVFSKYGKVTYVSLPKFKSTGKL 237
+E F +Y KV V LP KL
Sbjct: 127 KLEDVEKFFGQYAKVNSVRLPHHVGDKKL 155
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 14/80 (17%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKC--NKLARLTH----DPDD-------- 46
+EFY DSNL D F + + ES + +S+ L C N++ + + PD+
Sbjct: 18 VEFYFGDSNLLTDGFMRKSITESEDGMISLALICSFNRMRKHLNLGDVKPDEVAQETVNT 77
Query: 47 VVKALRKSKLLEVTEDGTKV 66
V + LR S L+V+EDG KV
Sbjct: 78 VAQTLRNSASLKVSEDGKKV 97
>gi|126660986|ref|ZP_01732073.1| RNA-binding region RNP-1 [Cyanothece sp. CCY0110]
gi|126617726|gb|EAZ88508.1| RNA-binding region RNP-1 [Cyanothece sp. CCY0110]
Length = 81
Score = 54.3 bits (129), Expect = 7e-05, Method: Composition-based stats.
Identities = 27/59 (45%), Positives = 38/59 (64%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
+IYV L E + +VFS YG V V +P + TG+ +GFAFVE +T+EE +KA+E
Sbjct: 2 SIYVGNLAYEVTDADLNTVFSDYGSVKRVHIPTDRETGRPRGFAFVEMNTEEEESKAIE 60
>gi|15230287|ref|NP_188540.1| RNA-binding protein [Arabidopsis thaliana]
gi|11994567|dbj|BAB02607.1| RNA-binding protein-like [Arabidopsis thaliana]
gi|332642672|gb|AEE76193.1| RNA-binding protein [Arabidopsis thaliana]
Length = 455
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 76/159 (47%), Gaps = 14/159 (8%)
Query: 112 QIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRK 169
+I+ +E+ +D +L + S+ + + PE + VS K+ LT + V ALR
Sbjct: 147 KIVKQVEYQFTDMSLLANESISKHISKDPEGYVPVSYIASTKKIKALTSNHHLVSLALRS 206
Query: 170 SKLLEVTEDGTKVRRT--VVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVS 227
S L V+EDG KV+RT +D+ ++ T+ E LP + + +E +F G V +
Sbjct: 207 SSKLVVSEDGKKVKRTSQFTDRDREELQGRTVVAENLPDDHSYQNLEKIFGVVGNVKAIR 266
Query: 228 L--PKFKSTGKLKG--------FAFVEFSTKEEAAKALE 256
+ P ++ + KG A +E+ A KA+E
Sbjct: 267 ICHPPESNSSRPKGDFLMSNKIHALIEYDNTVIADKAVE 305
>gi|225320691|dbj|BAH29741.1| hypothetical protein [Dicyema japonicum]
Length = 277
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 54/98 (55%), Gaps = 6/98 (6%)
Query: 117 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEVT 176
ME+Y SD NL +DR+ S + + +E+S L K+ +L DDVV+A+++S +E+
Sbjct: 15 MEYYFSDGNLARDRYMSSITNSAGYVEISNILHFYKMVKLNAKFDDVVQAVKESSFIELD 74
Query: 177 EDGTKVRR---TVVVQDK--PDV-DECTIYVEKLPPEA 208
T+VR VVQ + D+ DE T++ L P
Sbjct: 75 GSETRVRAKELCFVVQLRIAEDIKDEYTLWDRILAPSG 112
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEVT 60
ME+Y SD NL +DR+ S + + +E+S L K+ +L DDVV+A+++S +E+
Sbjct: 15 MEYYFSDGNLARDRYMSSITNSAGYVEISNILHFYKMVKLNAKFDDVVQAVKESSFIELD 74
Query: 61 EDGTKVKG 68
T+V+
Sbjct: 75 GSETRVRA 82
>gi|307152307|ref|YP_003887691.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7822]
gi|306982535|gb|ADN14416.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7822]
Length = 116
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%)
Query: 197 CTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
+IYV LP + D I+ VF +YG V V LP + +G+++GFAFV+ + E KA+E
Sbjct: 1 MSIYVGNLPYQVTQDDIKEVFGEYGTVKQVKLPIDRESGRVRGFAFVDLDSDAEETKAIE 60
>gi|322785246|gb|EFZ11949.1| hypothetical protein SINV_10926 [Solenopsis invicta]
Length = 439
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 83/160 (51%), Gaps = 15/160 (9%)
Query: 109 LYQQIMNLMEFYLSDSNLRKDRFF-SQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKAL 167
L +I +E+Y S++N+++D+F Q + I +S+ L LA L+ + + ++KAL
Sbjct: 83 LLAKIKAQVEYYFSNANMQRDKFLIEQTKLDEGWIPMSIMLNFKMLAALSKNANVILKAL 142
Query: 168 RKSKLLEVTEDGTKVRRTVVVQDKPDVDE--------CTIYVEKLPPEAEH-DYIESVFS 218
S L+E++ED K+RR+ P+ +E T+YV+ P + +++ F
Sbjct: 143 ETSDLIEISEDKKKIRRS-PKHPLPEYNEEYRKAQEARTVYVKGFPMTGTTIEELKAFFE 201
Query: 219 KYGKVTYVSLPKFKSTGKL---KGFAFVEFSTKEEAAKAL 255
Y + + +++ K+ KG F++F T + AKAL
Sbjct: 202 PYKPFETIMMRRYQDKNKVYQFKGSIFIQFETV-DGAKAL 240
Score = 44.7 bits (104), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 1 MEFYLSDSNLRKDRFF-SQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEV 59
+E+Y S++N+++D+F Q + I +S+ L LA L+ + + ++KAL S L+E+
Sbjct: 91 VEYYFSNANMQRDKFLIEQTKLDEGWIPMSIMLNFKMLAALSKNANVILKALETSDLIEI 150
Query: 60 TEDGTKVK 67
+ED K++
Sbjct: 151 SEDKKKIR 158
>gi|256084295|ref|XP_002578366.1| lupus la ribonucleoprotein [Schistosoma mansoni]
Length = 342
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 80/172 (46%), Gaps = 26/172 (15%)
Query: 109 LYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKA 166
+ ++I+ EFY SD+N+ KD++ L++ S + +++SV KL LT D + ++
Sbjct: 45 MNEKIIKQCEFYFSDANILKDQYLLNLVKSSKDGWVDLSVIASFKKLQSLTTDLSVIRQS 104
Query: 167 LRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLP---PEAEHDYIESV---FSKY 220
L S +EV+EDG +RR V P D+ Y + PE + +ES+ F+
Sbjct: 105 LTASTKIEVSEDGNTIRR---VDPLPTWDKSVYYRTIILSEFPENSNVTVESIQEFFTMN 161
Query: 221 G---KVTYVSLPKFKSTGKLKG------------FAFVEFSTKEEAAKALEL 257
G + V P K LK A VEF + +A KA+ L
Sbjct: 162 GHPPSLVRVLFPNRKIPSDLKRSQILHSQLGVKICAVVEFPNRPDALKAINL 213
Score = 44.3 bits (103), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
Query: 2 EFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEV 59
EFY SD+N+ KD++ L++ S + +++SV KL LT D + ++L S +EV
Sbjct: 54 EFYFSDANILKDQYLLNLVKSSKDGWVDLSVIASFKKLQSLTTDLSVIRQSLTASTKIEV 113
Query: 60 TEDGTKVK 67
+EDG ++
Sbjct: 114 SEDGNTIR 121
>gi|360045247|emb|CCD82795.1| putative lupus la ribonucleoprotein [Schistosoma mansoni]
Length = 328
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 80/173 (46%), Gaps = 26/173 (15%)
Query: 109 LYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKA 166
+ ++I+ EFY SD+N+ KD++ L++ S + +++SV KL LT D + ++
Sbjct: 31 MNEKIIKQCEFYFSDANILKDQYLLNLVKSSKDGWVDLSVIASFKKLQSLTTDLSVIRQS 90
Query: 167 LRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLP---PEAEHDYIESV---FSKY 220
L S +EV+EDG +RR V P D+ Y + PE + +ES+ F+
Sbjct: 91 LTASTKIEVSEDGNTIRR---VDPLPTWDKSVYYRTIILSEFPENSNVTVESIQEFFTMN 147
Query: 221 G---KVTYVSLPKFKSTGKLKG------------FAFVEFSTKEEAAKALELG 258
G + V P K LK A VEF + +A KA+ L
Sbjct: 148 GHPPSLVRVLFPNRKIPSDLKRSQILHSQLGVKICAVVEFPNRPDALKAINLS 200
Score = 43.9 bits (102), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
Query: 2 EFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEV 59
EFY SD+N+ KD++ L++ S + +++SV KL LT D + ++L S +EV
Sbjct: 40 EFYFSDANILKDQYLLNLVKSSKDGWVDLSVIASFKKLQSLTTDLSVIRQSLTASTKIEV 99
Query: 60 TEDGTKVK 67
+EDG ++
Sbjct: 100 SEDGNTIR 107
>gi|222618160|gb|EEE54292.1| hypothetical protein OsJ_01217 [Oryza sativa Japonica Group]
Length = 920
Score = 53.9 bits (128), Expect = 9e-05, Method: Composition-based stats.
Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 108 QLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKAL 167
+L +I+ +E+Y SDSNL D F L+ E + +S N+L ++T D +V+AL
Sbjct: 323 ELRAKILTQVEYYFSDSNLDHDNFLKSLMDEHGWVPISKVADFNRLKKMTTDIQLIVEAL 382
Query: 168 RKSKLLEVTEDGTKVRRT 185
S LLEV +DG RR+
Sbjct: 383 ANSSLLEV-QDGNMRRRS 399
Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEVT 60
+E+Y SDSNL D F L+ E + +S N+L ++T D +V+AL S LLEV
Sbjct: 332 VEYYFSDSNLDHDNFLKSLMDEHGWVPISKVADFNRLKKMTTDIQLIVEALANSSLLEV- 390
Query: 61 EDG 63
+DG
Sbjct: 391 QDG 393
>gi|6449448|gb|AAF00075.2|AF094825_1 RNA-binding protein homolog [Brassica napus]
Length = 367
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 75/159 (47%), Gaps = 14/159 (8%)
Query: 112 QIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRK 169
+I+ +E+ +D +L + S+ + + PE + +S K+ LT V ALR
Sbjct: 150 KIVKQVEYQFTDMSLLANESISKHINKDPEGYVPISYIASTKKIKALTSHHHLVALALRS 209
Query: 170 SKLLEVTEDGTKVRRTVVV--QDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVS 227
S L V+ED KVRR + +D+ ++ T+ VE LP + + +E +F G V +
Sbjct: 210 SSKLVVSEDNKKVRRKIPFTDRDREELQGRTVVVENLPDDHSYQNLEKIFGVVGNVKAIR 269
Query: 228 L--PKFKSTGKLKG--------FAFVEFSTKEEAAKALE 256
+ P +T + KG A +E+ A KA+E
Sbjct: 270 ICHPPESNTSRPKGDFLMSNKIHALIEYDHTVVADKAVE 308
>gi|147858321|emb|CAN81423.1| hypothetical protein VITISV_035943 [Vitis vinifera]
Length = 941
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 63/128 (49%), Gaps = 12/128 (9%)
Query: 142 IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEVTEDGTKVRRTVVV--QDKPDVDECTI 199
+ +SV K+ L + + +ALR S L V+ DG KVRR + +DK ++ T+
Sbjct: 123 VPISVIASSKKVKALVSNNQLLAQALRSSSQLVVSSDGKKVRRKHLFTERDKEELQAHTV 182
Query: 200 YVEKLPPEAEHDYIESVFSKYGKVTYVSL--PKFKSTGKLKG--------FAFVEFSTKE 249
E LP + H ++ +FS G V + + P+ + + KG A VE+ + E
Sbjct: 183 VAENLPDDHSHQNLQKIFSVVGSVKNIRICHPQESNNSRSKGDFFISNKLHALVEYESVE 242
Query: 250 EAAKALEL 257
A KA+E+
Sbjct: 243 IAEKAVEM 250
>gi|119183993|ref|XP_001242968.1| hypothetical protein CIMG_06864 [Coccidioides immitis RS]
gi|392865871|gb|EAS31715.2| RNA-binding La domain-containing protein [Coccidioides immitis RS]
Length = 444
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 82/174 (47%), Gaps = 30/174 (17%)
Query: 111 QQIMNLMEFYLSDSNLRKDRFFSQLL--QESPEIEVSVFLKCNKLARLTHDP-DDVVKAL 167
+QI +EFY SDSNL D+F + E+ +E+S+ ++ R P +V AL
Sbjct: 129 EQIRKQVEFYFSDSNLPMDKFLLSKVGGSENNPVELSLLHSFKRMRRFQ--PFSAIVDAL 186
Query: 168 RKSKLLEVTEDGTKVRRTV----------------VVQDKPDVDECTIYVE---KLPPEA 208
+ S+ LE+T D T VRR V V +DK +IY + K P
Sbjct: 187 KDSQTLELTNDNTCVRRKVPLPESATESGKESVAKVFEDK--AMHRSIYAKGFGKEEPST 244
Query: 209 EHDYIESVFSKYGKVTYVSLPKFKSTGKL-KGFAFVEFSTKEEAAKALELGLNP 261
+ D IE+ F+ YG V L ++ K+ KG FVEF ++E K L L P
Sbjct: 245 QFD-IEAFFAPYGPTNAVRL--RRTNEKIFKGSVFVEFDSEESQKKFLALDPKP 295
>gi|17506023|ref|NP_491411.1| Protein C44E4.4 [Caenorhabditis elegans]
gi|351059712|emb|CCD67305.1| Protein C44E4.4 [Caenorhabditis elegans]
Length = 396
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 76/152 (50%), Gaps = 17/152 (11%)
Query: 111 QQIMNLMEFYLSDSNLRKDRFFSQLLQESPE-IEVSVFLKCNKLARLTHDPDDVVKALRK 169
Q+I+ +E+Y + NL +D+F + L+E + ++ L N+LA ++ D + + A++
Sbjct: 14 QKIIKQLEYYFGNINLPRDKFLQEKLKEDDGWVPITTMLNFNRLASISKDTEKIANAVKN 73
Query: 170 --SKLLEVTEDGTKVRRTVVVQDKP----------DVDECTIYVEKLPPEAEHDYIESVF 217
S ++ V+ED K+RR ++ P + T+Y++ + + D I
Sbjct: 74 SGSGIISVSEDNQKIRRN---EENPVPENSLEYWQKIKHRTVYMKGFSTDTQLDDIIQWA 130
Query: 218 SKYGKVTYVSLPKFKSTGK-LKGFAFVEFSTK 248
+++G+ V + + K + KG F+ + T+
Sbjct: 131 NQFGETENVLMRRLKPGDRTFKGSVFITYKTR 162
Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE-IEVSVFLKCNKLARLTHDPDDVVKALRK--SKLL 57
+E+Y + NL +D+F + L+E + ++ L N+LA ++ D + + A++ S ++
Sbjct: 20 LEYYFGNINLPRDKFLQEKLKEDDGWVPITTMLNFNRLASISKDTEKIANAVKNSGSGII 79
Query: 58 EVTEDGTKVKGN 69
V+ED K++ N
Sbjct: 80 SVSEDNQKIRRN 91
>gi|330797650|ref|XP_003286872.1| hypothetical protein DICPUDRAFT_150883 [Dictyostelium purpureum]
gi|325083174|gb|EGC36634.1| hypothetical protein DICPUDRAFT_150883 [Dictyostelium purpureum]
Length = 388
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 85/190 (44%), Gaps = 56/190 (29%)
Query: 109 LYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALR 168
+Y+++ ++EFYLSDSN+R+D++ L++ + E
Sbjct: 21 IYEKVREILEFYLSDSNIRRDKYLLNLIKLNNE--------------------------G 54
Query: 169 KSKLLEVTEDGTKVRRT------VVVQDKPDVDECTIYVEKLPPE-AEHDYIESVFSK-- 219
K L + D K++R + + ++DE TIY+E + + + + IES+F K
Sbjct: 55 YCKTLILNNDKKKIKRIQPFKEELTNHEIKEIDERTIYIEPITNDLSNNTLIESLFLKDK 114
Query: 220 -------------------YGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLN 260
+ ++S+P+F +KGF+F+EFS+KE A K + ++
Sbjct: 115 SIFNNNNNNNSNIDSGVVNSSPILHISIPRFPDKT-IKGFSFIEFSSKEFAEKMIN-QID 172
Query: 261 PCPPDYQSSI 270
P Y + I
Sbjct: 173 QFPDQYNNLI 182
>gi|75906353|ref|YP_320649.1| RNA-binding region RNP-1 [Anabaena variabilis ATCC 29413]
gi|75700078|gb|ABA19754.1| RNA-binding region RNP-1 [Anabaena variabilis ATCC 29413]
Length = 103
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 197 CTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
+IYV L E + I +VF++YG V V LP + TG+L+GFAFVE + E A+E
Sbjct: 1 MSIYVGNLSYEVTQEDISNVFAEYGSVKRVVLPTDRETGRLRGFAFVEMGSDAEETAAIE 60
Query: 257 LGLNPC 262
GL+
Sbjct: 61 -GLDGA 65
>gi|399218801|emb|CCF75688.1| unnamed protein product [Babesia microti strain RI]
Length = 765
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 57/109 (52%), Gaps = 17/109 (15%)
Query: 166 ALRKSKLLEVTEDGTKVRRTVVVQDKP-------DVDEC-TIYVEKLPPEAEHDYIESVF 217
A+ K+K+ +VT K+R + KP DV+E T +V+ +P EA + +ES+F
Sbjct: 460 AISKNKITKVTLKQLKMRSAEITNGKPSSSTINSDVNEGKTAFVQNVPFEATQEQLESIF 519
Query: 218 SKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKE--------EAAKALELG 258
YG++ Y L K G+ KG AFV+F TKE EA E+G
Sbjct: 520 RVYGELEYAKLVK-DPAGRNKGTAFVKFMTKESLDNLLSSEANTKFEIG 567
>gi|297830560|ref|XP_002883162.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297329002|gb|EFH59421.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 455
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 76/159 (47%), Gaps = 14/159 (8%)
Query: 112 QIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRK 169
+I+ +E+ +D +L + S+ + + PE + +S K+ LT + V ALR
Sbjct: 147 KIVKQVEYQFTDMSLLANESISKHISKDPEGYVPISYIASTKKIKALTSNHHLVSLALRS 206
Query: 170 SKLLEVTEDGTKVRRT--VVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVS 227
S L V+EDG KV+RT +D+ ++ T+ E LP + + +E +F G V +
Sbjct: 207 SSKLVVSEDGKKVKRTSPFTDRDREELQGRTVVAENLPDDHSYQNLEKIFGVVGNVKAIR 266
Query: 228 L--PKFKSTGKLKG--------FAFVEFSTKEEAAKALE 256
+ P ++ + KG A +E+ A KA+E
Sbjct: 267 ICHPPESNSSRPKGDFLMSNKIHALIEYDNTVIADKAVE 305
>gi|218187940|gb|EEC70367.1| hypothetical protein OsI_01301 [Oryza sativa Indica Group]
Length = 924
Score = 53.9 bits (128), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 108 QLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKAL 167
+L +I+ +E+Y SDSNL D F L+ E + +S N+L ++T D +V+AL
Sbjct: 327 ELRAKILTQVEYYFSDSNLDHDNFLKSLMDEHGWVPISKVADFNRLKKMTTDIQLIVEAL 386
Query: 168 RKSKLLEVTEDGTKVRRT 185
S LLEV +DG RR+
Sbjct: 387 ANSSLLEV-QDGNMRRRS 403
Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEVT 60
+E+Y SDSNL D F L+ E + +S N+L ++T D +V+AL S LLEV
Sbjct: 336 VEYYFSDSNLDHDNFLKSLMDEHGWVPISKVADFNRLKKMTTDIQLIVEALANSSLLEV- 394
Query: 61 EDG 63
+DG
Sbjct: 395 QDG 397
>gi|17229803|ref|NP_486351.1| RNA-binding protein [Nostoc sp. PCC 7120]
gi|81859085|sp|Q9WX39.3|RBPF_NOSS1 RecName: Full=Putative RNA-binding protein RbpF
gi|4850345|dbj|BAA77713.1| RNA binding protein [Anabaena variabilis]
gi|17131403|dbj|BAB74010.1| RNA-binding protein [Nostoc sp. PCC 7120]
Length = 105
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 197 CTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
+IYV L E + I +VF++YG V V LP + TG+L+GFAFVE + E A+E
Sbjct: 1 MSIYVGNLSYEVTQEDISNVFAEYGSVKRVVLPTDRETGRLRGFAFVEMGSDAEETAAIE 60
Query: 257 LGLNPC 262
GL+
Sbjct: 61 -GLDGA 65
>gi|359460000|ref|ZP_09248563.1| RNA-binding protein [Acaryochloris sp. CCMEE 5410]
Length = 95
Score = 53.5 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 37/59 (62%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
+IYV L + + + + FS+YG V V LP + TGK++GF FVE S+ E AKA++
Sbjct: 2 SIYVGNLSYDVTEENLSTAFSEYGTVKLVKLPTDRETGKMRGFGFVEMSSDAEEAKAID 60
>gi|307153774|ref|YP_003889158.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7822]
gi|306984002|gb|ADN15883.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7822]
Length = 102
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 35/59 (59%)
Query: 197 CTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKAL 255
+IYV LP E E D + VF++YGKV V +P + TG+ +GF FVE T + A+
Sbjct: 1 MSIYVGNLPFEVEEDNLNEVFAEYGKVKRVYMPVDRDTGRRRGFGFVEMETSAQEDSAI 59
>gi|326531356|dbj|BAK05029.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 490
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 64/127 (50%), Gaps = 6/127 (4%)
Query: 108 QLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE----IEVSVFLKCNKLARLTHDPDDV 163
+L +I+ +E+Y SD NL D F + + ++ E + + V K+ +L D +
Sbjct: 170 ELRDKIVKQVEYYFSDENLPTDEFMLKFVMKNKEGLGNVPLGVIASFRKMKKLVQDHSAI 229
Query: 164 VKALRKSKLLEVTEDGTKVRR--TVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYG 221
ALR S L V+ +G +VRR + + DV + T+ VE LP + + ++ F G
Sbjct: 230 EAALRTSSKLVVSSNGKRVRRLHPLPCNELKDVKKRTVVVENLPLDFSLESLQEKFGSVG 289
Query: 222 KVTYVSL 228
K+ +++
Sbjct: 290 KIMKITI 296
>gi|428203801|ref|YP_007082390.1| RRM domain-containing RNA-binding protein [Pleurocapsa sp. PCC
7327]
gi|427981233|gb|AFY78833.1| RRM domain-containing RNA-binding protein [Pleurocapsa sp. PCC
7327]
Length = 99
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%)
Query: 197 CTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
+I++ LP E D ++ VF+ YG V V LP + TG+++GFAFVE T+ E A++
Sbjct: 1 MSIFIGNLPYEVSEDDLKQVFADYGTVKSVRLPMDRETGRVRGFAFVEMDTEAEETAAIQ 60
>gi|320031913|gb|EFW13870.1| hypothetical protein CPSG_09523 [Coccidioides posadasii str.
Silveira]
Length = 444
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 82/174 (47%), Gaps = 30/174 (17%)
Query: 111 QQIMNLMEFYLSDSNLRKDRFFSQLL--QESPEIEVSVFLKCNKLARLTHDP-DDVVKAL 167
+QI +EFY SDSNL D+F + E+ +E+S+ ++ R P +V AL
Sbjct: 129 EQIRKQVEFYFSDSNLPMDKFLLSKVGGSENNPVELSLLHSFKRMRRFQ--PFSAIVDAL 186
Query: 168 RKSKLLEVTEDGTKVRRTV----------------VVQDKPDVDECTIYVE---KLPPEA 208
+ S+ LE+T D T VRR V V +DK +IY + K P
Sbjct: 187 KDSQTLELTNDNTCVRRKVPLPESATESGKESVAKVFEDK--AMHRSIYAKGFGKEEPST 244
Query: 209 EHDYIESVFSKYGKVTYVSLPKFKSTGKL-KGFAFVEFSTKEEAAKALELGLNP 261
+ D IE+ F+ YG V L ++ K+ KG FVEF ++E K L L P
Sbjct: 245 QFD-IEAFFAPYGPTNAVRL--RRTNEKIFKGSVFVEFDSEESQKKFLALDPKP 295
>gi|303320151|ref|XP_003070075.1| La domain containing protein [Coccidioides posadasii C735 delta
SOWgp]
gi|240109761|gb|EER27930.1| La domain containing protein [Coccidioides posadasii C735 delta
SOWgp]
Length = 446
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 82/174 (47%), Gaps = 30/174 (17%)
Query: 111 QQIMNLMEFYLSDSNLRKDRFFSQLL--QESPEIEVSVFLKCNKLARLTHDP-DDVVKAL 167
+QI +EFY SDSNL D+F + E+ +E+S+ ++ R P +V AL
Sbjct: 129 EQIRKQVEFYFSDSNLPMDKFLLSKVGGSENNPVELSLLHSFKRMRRFQ--PFSAIVDAL 186
Query: 168 RKSKLLEVTEDGTKVRRTV----------------VVQDKPDVDECTIYVE---KLPPEA 208
+ S+ LE+T D T VRR V V +DK +IY + K P
Sbjct: 187 KDSQTLELTNDNTCVRRKVPLPESATESGKESVAKVFEDK--AMHRSIYAKGFGKEEPST 244
Query: 209 EHDYIESVFSKYGKVTYVSLPKFKSTGKL-KGFAFVEFSTKEEAAKALELGLNP 261
+ D IE+ F+ YG V L ++ K+ KG FVEF ++E K L L P
Sbjct: 245 QFD-IEAFFAPYGPTNAVRL--RRTNEKIFKGSVFVEFDSEESQKKFLALDPKP 295
>gi|226472594|emb|CAX70983.1| hypothetical protein [Schistosoma japonicum]
Length = 326
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 85/170 (50%), Gaps = 26/170 (15%)
Query: 112 QIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRK 169
+I+ EFY SD+N+ KD+F +L++ S E ++++V K+ L+ D + K+L
Sbjct: 34 KIVKQCEFYFSDANILKDQFLLKLVKSSKEGWVDLTVVANFKKMQSLSKDISVIRKSLAA 93
Query: 170 SKLLEVTEDGTKVRRTVVVQDKPDVDEC----TIYVEKLPPEAE--HDYIESVFSKYG-- 221
S L++++DG VRR ++ P+ D+ +I + P A + I+ F+K G
Sbjct: 94 STKLQISDDGKTVRR---IEPLPEWDKAVYFRSIILSDFPDSASVTVESIQEFFTKNGYP 150
Query: 222 ----KVTYVSL---PKFKSTGKL------KGFAFVEFSTKEEAAKALELG 258
+V Y + P K + L K A VEF + +A++A+ L
Sbjct: 151 PSLVRVLYPNRKVPPDLKRSQILHNQLGVKTCAVVEFPNRSDASEAISLS 200
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 42/68 (61%), Gaps = 2/68 (2%)
Query: 2 EFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEV 59
EFY SD+N+ KD+F +L++ S E ++++V K+ L+ D + K+L S L++
Sbjct: 40 EFYFSDANILKDQFLLKLVKSSKEGWVDLTVVANFKKMQSLSKDISVIRKSLAASTKLQI 99
Query: 60 TEDGTKVK 67
++DG V+
Sbjct: 100 SDDGKTVR 107
>gi|297596507|ref|NP_001042674.2| Os01g0266000 [Oryza sativa Japonica Group]
gi|56783776|dbj|BAD81188.1| la related protein -like [Oryza sativa Japonica Group]
gi|255673094|dbj|BAF04588.2| Os01g0266000 [Oryza sativa Japonica Group]
Length = 924
Score = 53.5 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 108 QLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKAL 167
+L +I+ +E+Y SDSNL D F L+ E + +S N+L ++T D +V+AL
Sbjct: 327 ELRAKILTQVEYYFSDSNLDHDNFLKSLMDEHGWVPISKVADFNRLKKMTTDIQLIVEAL 386
Query: 168 RKSKLLEVTEDGTKVRRT 185
S LLEV +DG RR+
Sbjct: 387 ANSSLLEV-QDGNMRRRS 403
Score = 47.0 bits (110), Expect = 0.011, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEVT 60
+E+Y SDSNL D F L+ E + +S N+L ++T D +V+AL S LLEV
Sbjct: 336 VEYYFSDSNLDHDNFLKSLMDEHGWVPISKVADFNRLKKMTTDIQLIVEALANSSLLEV- 394
Query: 61 EDG 63
+DG
Sbjct: 395 QDG 397
>gi|298490358|ref|YP_003720535.1| RNP-1 like RNA-binding protein ['Nostoc azollae' 0708]
gi|298232276|gb|ADI63412.1| RNP-1 like RNA-binding protein ['Nostoc azollae' 0708]
Length = 111
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 36/59 (61%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
++YV L E D + VF++YG V V +P + TG+++GFAFVE S+ E A+E
Sbjct: 2 SVYVGNLSYEVTQDALTQVFAEYGSVKRVQIPTDRETGRVRGFAFVEMSSDAEETAAIE 60
>gi|91087187|ref|XP_975429.1| PREDICTED: similar to acheron [Tribolium castaneum]
gi|270009568|gb|EFA06016.1| hypothetical protein TcasGA2_TC008844 [Tribolium castaneum]
Length = 456
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 81/171 (47%), Gaps = 24/171 (14%)
Query: 108 QLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN--KLARLTHDPDDVVK 165
+L +I+ +EFY SD+N+ KD F + ++ + E VS+ L + ++ LT D V
Sbjct: 106 ELADKIVQQVEFYFSDANITKDAFLLKHVKRNKEGYVSLKLISSFKRVKHLTKDWRVVAH 165
Query: 166 ALRKSKLLEVTEDGTKVRRTVVVQDKPDVDEC----TIYVEKLPPE-AEHDYIESVFSKY 220
AL +S LE+ E GTK+RR + P DE T+ +P E A + + +F
Sbjct: 166 ALSRSTKLEINEAGTKLRR---LDPLPQYDETTPSRTVVAVHMPIEKATIENVAELFKVC 222
Query: 221 GKVTYVSL--PKFKSTGKLKGF------------AFVEFSTKEEAAKALEL 257
G++ + + P ++ F A VEF T E A A++L
Sbjct: 223 GEIALIRILRPGNPIPADVRQFINKNPSLAGVVCALVEFVTSESARNAIQL 273
Score = 41.2 bits (95), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN--KLARLTHDPDDVVKALRKSKLLE 58
+EFY SD+N+ KD F + ++ + E VS+ L + ++ LT D V AL +S LE
Sbjct: 115 VEFYFSDANITKDAFLLKHVKRNKEGYVSLKLISSFKRVKHLTKDWRVVAHALSRSTKLE 174
Query: 59 VTEDGTKVK 67
+ E GTK++
Sbjct: 175 INEAGTKLR 183
>gi|428203044|ref|YP_007081633.1| RRM domain-containing RNA-binding protein [Pleurocapsa sp. PCC
7327]
gi|427980476|gb|AFY78076.1| RRM domain-containing RNA-binding protein [Pleurocapsa sp. PCC
7327]
Length = 103
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
+IYV L E + SVF++YG V V LP + TG+++GFAFVE T + A A+E
Sbjct: 2 SIYVGNLSYEVTEAELNSVFAEYGSVKRVHLPTDRETGRMRGFAFVEMETTAQEAAAIE 60
>gi|33865457|ref|NP_897016.1| rna-binding protein RbpD [Synechococcus sp. WH 8102]
gi|33632626|emb|CAE07438.1| putativeRNA-binding protein RbpD [Synechococcus sp. WH 8102]
Length = 96
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 39/59 (66%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
TIY+ L +AE +++ +FS+YG+V SLP + TG+ +GFAFVE E+ KA++
Sbjct: 2 TIYIGNLSFQAEQEHLFDLFSEYGEVKNCSLPLDRETGRKRGFAFVEMVNDEDEQKAID 60
>gi|356506140|ref|XP_003521845.1| PREDICTED: uncharacterized protein LOC100801679 isoform 2 [Glycine
max]
Length = 459
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 58/121 (47%), Gaps = 6/121 (4%)
Query: 111 QQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALR 168
Q+I+N +E+Y SD NL + + + PE + +SV K+ L + LR
Sbjct: 160 QKILNQVEYYFSDLNLATTDHLMRFINKDPEGFVPISVVASFKKIKALIASHSQLATVLR 219
Query: 169 KSKLLEVTEDGTKVRRTVVVQDKPDVDEC---TIYVEKLPPEAEHDYIESVFSKYGKVTY 225
S L V+EDG K++R + + D++E + E LP + H + VFS G V
Sbjct: 220 NSSKLVVSEDGKKIKRQYPLTES-DIEELQSRIVVAENLPEDHCHQNLMKVFSAVGSVKT 278
Query: 226 V 226
+
Sbjct: 279 I 279
>gi|414870689|tpg|DAA49246.1| TPA: hypothetical protein ZEAMMB73_519082 [Zea mays]
Length = 413
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 77/152 (50%), Gaps = 11/152 (7%)
Query: 109 LYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKA 166
+ +I+ +E+ SD+NL + F ++++ + PE + +SV K+ + +V A
Sbjct: 114 IADKIVKQVEYQFSDTNLVANDFLTKIMNKDPEGYVPLSVISSWKKIKAMGVTSQLLVMA 173
Query: 167 LRKSKLLEVTEDGTKVRRTVVVQDKPDVD-ECTIYV-EKLPPEAEHDYIESVFSKYGKVT 224
LR S L V++DG KVRR ++ + +C + + E LP ++ + +E +F G +
Sbjct: 174 LRTSDKLVVSDDGRKVRRAQPFTERHKEELQCRMVIAENLPQDSTRNSLEKIFGVIGSCS 233
Query: 225 YVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
+S + A +E+ T +A +A++
Sbjct: 234 LLSF-------LTQLHALIEYETSHQADRAVD 258
Score = 38.1 bits (87), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
+E+ SD+NL + F ++++ + PE + +SV K+ + +V ALR S L
Sbjct: 122 VEYQFSDTNLVANDFLTKIMNKDPEGYVPLSVISSWKKIKAMGVTSQLLVMALRTSDKLV 181
Query: 59 VTEDGTKVK 67
V++DG KV+
Sbjct: 182 VSDDGRKVR 190
>gi|226468002|emb|CAX76228.1| hypothetical protein [Schistosoma japonicum]
gi|226468004|emb|CAX76229.1| hypothetical protein [Schistosoma japonicum]
gi|226468006|emb|CAX76230.1| hypothetical protein [Schistosoma japonicum]
Length = 326
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 85/170 (50%), Gaps = 26/170 (15%)
Query: 112 QIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRK 169
+I+ EFY SD+N+ KD+F +L++ S E ++++V K+ L+ D + K+L
Sbjct: 34 KIVKQCEFYFSDANILKDQFLLKLVKSSKEGWVDLTVVANFKKMQSLSKDISVIRKSLAA 93
Query: 170 SKLLEVTEDGTKVRRTVVVQDKPDVDEC----TIYVEKLPPEAE--HDYIESVFSKYG-- 221
S L++++DG VRR ++ P+ D+ +I + P A + I+ F+K G
Sbjct: 94 STKLQISDDGKTVRR---IEPLPEWDKAVYFRSIILSDFPDSASVTVESIQEFFTKNGYP 150
Query: 222 ----KVTYVSL---PKFKSTGKL------KGFAFVEFSTKEEAAKALELG 258
+V Y + P K + L K A VEF + +A++A+ L
Sbjct: 151 PSLVRVLYPNRKVPPDLKRSQILHNQLGVKTCAVVEFPNRSDASEAISLS 200
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 42/68 (61%), Gaps = 2/68 (2%)
Query: 2 EFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEV 59
EFY SD+N+ KD+F +L++ S E ++++V K+ L+ D + K+L S L++
Sbjct: 40 EFYFSDANILKDQFLLKLVKSSKEGWVDLTVVANFKKMQSLSKDISVIRKSLAASTKLQI 99
Query: 60 TEDGTKVK 67
++DG V+
Sbjct: 100 SDDGKTVR 107
>gi|116786211|gb|ABK24023.1| unknown [Picea sitchensis]
Length = 302
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 33/63 (52%)
Query: 195 DECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKA 254
DEC +YV +P + D I S F G VT V F +GK +G A + F TK A +A
Sbjct: 74 DECKVYVGGIPYYSNEDDIRSFFEGCGTVTEVDCMTFPDSGKFRGIALISFKTKAAATRA 133
Query: 255 LEL 257
L L
Sbjct: 134 LAL 136
>gi|148239850|ref|YP_001225237.1| RNA-binding protein [Synechococcus sp. WH 7803]
gi|147848389|emb|CAK23940.1| RNA-binding protein, RRM domain [Synechococcus sp. WH 7803]
Length = 116
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 39/60 (65%)
Query: 197 CTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
TIY+ L +AE + + +FS+YG+V SLP + TG+ +GF FVE ++ E+ KA++
Sbjct: 1 MTIYIGNLSFQAEQEDLLDLFSQYGEVKSASLPLDRETGRKRGFGFVEMNSDEDEQKAID 60
>gi|399217298|emb|CCF73985.1| unnamed protein product [Babesia microti strain RI]
Length = 432
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 62/124 (50%), Gaps = 13/124 (10%)
Query: 143 EVSVFLKCNKLARLTHDPDDVVKALRKSKLLEVTEDGTKVRRTVV---------VQDKPD 193
++ F+K +A D D V+AL K+L+ + +V+ V +P
Sbjct: 70 KLCAFVKMGSIA----DADSAVRALHNIKVLDASLGALQVKYAVGEVARLGLSNANSEPG 125
Query: 194 VDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAK 253
VD+ +++ +P + I+ VF +YG+V V + K STG KG AFV+ S KE+
Sbjct: 126 VDQVKLFIGSVPKTITEEQIKKVFGEYGQVEEVFIMKDLSTGLSKGCAFVKMSYKEQGLY 185
Query: 254 ALEL 257
A+++
Sbjct: 186 AIKM 189
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 33/59 (55%)
Query: 197 CTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKAL 255
+++ +P + + + FS++G + + K TG+ +GFAFV +ST E A KA+
Sbjct: 332 ANLFIFHIPYDWYYADLVKTFSQFGTIVSARIATDKGTGRNRGFAFVSYSTVESAVKAI 390
>gi|357148711|ref|XP_003574867.1| PREDICTED: uncharacterized protein LOC100831659 isoform 1
[Brachypodium distachyon]
Length = 407
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 77/169 (45%), Gaps = 21/169 (12%)
Query: 107 KQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVV 164
++L ++++ +EFY SD NL + + + P+ + +SV K+ L P +
Sbjct: 95 EELARRVVKQVEFYFSDINLTTTDHLMKFITKDPDGFVPMSVVASFRKIRELITRPL-LP 153
Query: 165 KALRKSKLLEVTEDGTKVRRTV--VVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYG- 221
ALR S L V++DG VRR V D +V + EKLP + H + +FS G
Sbjct: 154 AALRTSTELVVSDDGKMVRRRVPFTDSDSEEVQSRIVVAEKLPDDHRHQNLMRIFSVVGS 213
Query: 222 ---------KVTYVSLPKFKSTGKLKGF------AFVEFSTKEEAAKAL 255
+V VS P +++ AFVE+ T E A +A+
Sbjct: 214 VKSIRTCYPQVVDVSGPAAGKASRIEMLFANRLHAFVEYETVEAAERAV 262
>gi|346466155|gb|AEO32922.1| hypothetical protein [Amblyomma maculatum]
Length = 502
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 179 GTKVRRTVVVQDKPDVDEC-TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKL 237
G +R VV KP E T++V LP E + + + + F+ G VT V L + K TG
Sbjct: 318 GKHIRVDVVGDTKPQASESHTVFVGNLPHEVQDEELWTFFADCGDVTSVRLIRDKGTGMG 377
Query: 238 KGFAFVEFSTKEEAAKALEL 257
KGF FV F ++ AA ALE+
Sbjct: 378 KGFGFVTFKNRDGAALALEM 397
>gi|357148714|ref|XP_003574868.1| PREDICTED: uncharacterized protein LOC100831659 isoform 2
[Brachypodium distachyon]
Length = 420
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 77/169 (45%), Gaps = 21/169 (12%)
Query: 107 KQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVV 164
++L ++++ +EFY SD NL + + + P+ + +SV K+ L P +
Sbjct: 95 EELARRVVKQVEFYFSDINLTTTDHLMKFITKDPDGFVPMSVVASFRKIRELITRPL-LP 153
Query: 165 KALRKSKLLEVTEDGTKVRRTV--VVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYG- 221
ALR S L V++DG VRR V D +V + EKLP + H + +FS G
Sbjct: 154 AALRTSTELVVSDDGKMVRRRVPFTDSDSEEVQSRIVVAEKLPDDHRHQNLMRIFSVVGS 213
Query: 222 ---------KVTYVSLPKFKSTGKLKGF------AFVEFSTKEEAAKAL 255
+V VS P +++ AFVE+ T E A +A+
Sbjct: 214 VKSIRTCYPQVVDVSGPAAGKASRIEMLFANRLHAFVEYETVEAAERAV 262
>gi|427417097|ref|ZP_18907280.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
7375]
gi|425759810|gb|EKV00663.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
7375]
Length = 91
Score = 53.5 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/59 (44%), Positives = 39/59 (66%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
+IYV L +A + I +VF++YG V V LP + TG+ +GFAFVE S+++E A+E
Sbjct: 2 SIYVGNLSYDATQEDINAVFAEYGTVQRVHLPTDRETGRPRGFAFVEMSSEDEETSAIE 60
>gi|374586124|ref|ZP_09659216.1| RNP-1 like RNA-binding protein [Leptonema illini DSM 21528]
gi|373874985|gb|EHQ06979.1| RNP-1 like RNA-binding protein [Leptonema illini DSM 21528]
Length = 102
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 37/59 (62%)
Query: 197 CTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKAL 255
IYV LP A D ++++F+ +G V V++P + TG+ +GFAFVE EA++A+
Sbjct: 1 MNIYVGNLPFRASSDELQNIFAAHGTVARVTIPVDRETGRSRGFAFVEMPNDAEASEAI 59
>gi|384491066|gb|EIE82262.1| hypothetical protein RO3G_06967 [Rhizopus delemar RA 99-880]
Length = 340
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 81/171 (47%), Gaps = 9/171 (5%)
Query: 111 QQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALR 168
+I ++E Y SD+NL D+ ++ E + K K L P+++ + R
Sbjct: 7 HKIAKILEAYFSDANLMWDKLMLSKIKADAEGFVPFETLCKLQKFKALGAKPEEIRECAR 66
Query: 169 KSKL--LEVTEDGTKVRRTVVVQDKPD--VDECTIYVEKLP-PEAEHDYIESVFSKY-GK 222
L L+++ D + R ++ D +DE +IYVE L P I +F+ + G
Sbjct: 67 IHSLSRLKLSVDDKSIARIKPIKSNKDDILDEWSIYVEGLTKPYQTEGSIAKLFTTHIGN 126
Query: 223 VTYVSLPKFK-STGKLKGFAFVEFSTKEEAAKALELGLNPCPPDYQSSILT 272
VT V +P+ + + GF F+EF +E+ KA +L + P+ + +++
Sbjct: 127 VTRVHIPENRFGKKQFMGFCFIEFDDQEDVPKAAQLISDQQLPNLKLRVMS 177
>gi|326478692|gb|EGE02702.1| pre-mRNA splicing factor [Trichophyton equinum CBS 127.97]
Length = 1545
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 63/129 (48%), Gaps = 7/129 (5%)
Query: 134 QLLQESPEIEVSVFLK-CNKLARLTHDPDDVVKALRKSKLLE-VTEDGTKVRRTV---VV 188
L ++ P++++ F + C KL L P D AL + E GTK ++ + V
Sbjct: 810 NLPKDIPQVKIRQFFRDCGKLNALQMLPGDSGSALLEFDTHEDALAAGTKNQKVLEGNQV 869
Query: 189 QDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTK 248
+P V + TI+V PP A+ +YI +F YG++ V P K + F +V+F++
Sbjct: 870 TVEP-VTDTTIFVTNFPPTADENYIRELFHSYGEIAEVRFPSLKFNTHRR-FCYVQFTSS 927
Query: 249 EEAAKALEL 257
A A EL
Sbjct: 928 SSAYAATEL 936
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 199 IYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALEL 257
IYV +P + + +F+ YG V V +P K G+ +GF FV F+TK+++ AL +
Sbjct: 970 IYVCNIPYKTTEGDLVELFTAYGDVESVRIPT-KVNGETRGFGFVTFATKDQSTAALAM 1027
>gi|358394186|gb|EHK43587.1| hypothetical protein TRIATDRAFT_85620 [Trichoderma atroviride IMI
206040]
Length = 1057
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 69/142 (48%), Gaps = 23/142 (16%)
Query: 129 DRFFSQLLQESPEIEVSV---FLKCNKLARLTH----DPDDVVKALRKSKLL-------- 173
+++ QL Q+ +I +S+ LK N R + D D KA+ K +L
Sbjct: 682 EQYIRQLFQDCGDI-LSIRWPSLKVNSHRRFCYVSFCDSDASAKAVAKEGILLNGKYTLL 740
Query: 174 -EVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFK 232
+ ++ K R V + +V +V L P D I +FSKYG + +++P+
Sbjct: 741 AKYSDPNRKRNREGAVAEGREV-----HVSGLGPSTTEDEIREIFSKYGTIARINVPR-S 794
Query: 233 STGKLKGFAFVEFSTKEEAAKA 254
GK +GFAF++F TK++A KA
Sbjct: 795 DNGKGRGFAFIDFETKDQAEKA 816
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 196 ECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKAL 255
+ TIYV PP A+ YI +F G + + P K + F +V F + +AKA+
Sbjct: 668 DLTIYVANYPPTADEQYIRQLFQDCGDILSIRWPSLKVNSHRR-FCYVSFCDSDASAKAV 726
>gi|392587572|gb|EIW76906.1| hypothetical protein CONPUDRAFT_84743 [Coniophora puteana
RWD-64-598 SS2]
Length = 486
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 77/169 (45%), Gaps = 10/169 (5%)
Query: 117 MEFYLSDSNLRKDRFFSQLLQESPEIEVSV-FLKCNKLAR--LTHDPDDVVKALRKSKLL 173
+EFY DSNL D+F L E V + + K R + + + +V ALR S+ L
Sbjct: 39 VEFYFGDSNLPFDKFMWTLHIADKEHWVPIKTIASFKRMRDFVPYGLEWLVDALRASEEL 98
Query: 174 EVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAE--HDYIESVFSKYGKVTYVSLPKF 231
E+ E G KVRR +Q E ++Y + E +E F++YG+ V + +
Sbjct: 99 ELDESGEKVRRLTELQPPKGQFERSVYAKGFGSEDSGLQKKLEEFFNQYGQTNAVRMRRV 158
Query: 232 KSTGKLKGFAFVEFSTKEEAAKALELGLNPCP-PDYQSSILTTTSRLSF 279
+ KG F E++ K E LN P P ++ L T S+ ++
Sbjct: 159 DGNKEFKGSVFAEYAD----IKGAEAFLNADPKPTWEGGELLTMSKEAY 203
>gi|328722252|ref|XP_001944486.2| PREDICTED: la protein homolog [Acyrthosiphon pisum]
Length = 204
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 75/156 (48%), Gaps = 13/156 (8%)
Query: 112 QIMNLMEFYLSDSNLRKDRFF-SQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKS 170
+I+ +EFY SD+NL D+F +++ + +SV L L +T D + A++ +
Sbjct: 17 RIVKQLEFYFSDTNLPYDKFLQAKIRLNDGWVPISVLLTFKMLKSITRDSAVIASAVKDA 76
Query: 171 --KLLEVTEDGTKVRRTV-VVQDKP------DVDECTIYVEKLPPEAEHDYIESVFSKYG 221
++EV E G K+RR + P D+ + +IY P D + + +G
Sbjct: 77 VDSIVEVDETGLKIRRKPKIAAPAPDRRLFKDIVQRSIYCSGFPRTTTVDELLEFAATFG 136
Query: 222 K--VTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKAL 255
+T + +FKS KG + FSTK+EA K L
Sbjct: 137 DNVITKTTPMRFKSQA-FKGSLYFTFSTKDEAEKFL 171
>gi|393763707|ref|ZP_10352323.1| hypothetical protein AGRI_11977 [Alishewanella agri BL06]
gi|392605375|gb|EIW88270.1| hypothetical protein AGRI_11977 [Alishewanella agri BL06]
Length = 165
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Query: 179 GTKVRRTVVVQDKPDVD----ECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKST 234
G V + Q+ P+ D T+YV LP A D ++++FS+YG V V L K + T
Sbjct: 56 GPAVSAEISTQEIPNNDFSGETATLYVGNLPYRANEDAVKALFSRYGTVVNVRLMKDRQT 115
Query: 235 GKLKGFAFVEFSTKE 249
G+ +GF FVE + +
Sbjct: 116 GRRRGFGFVEVAAAD 130
>gi|315056701|ref|XP_003177725.1| lupus La protein [Arthroderma gypseum CBS 118893]
gi|311339571|gb|EFQ98773.1| lupus La protein [Arthroderma gypseum CBS 118893]
Length = 418
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 88/197 (44%), Gaps = 33/197 (16%)
Query: 86 DNVDKDLSDLQRKDGGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLL--QESPEIE 143
DN+ D S L+ D RK+ +EFY SDSNL D+F + E+ +E
Sbjct: 92 DNIKSDPSSLEETDDPTEIRKQ---------VEFYFSDSNLPMDKFLLSKVGGSENKPVE 142
Query: 144 VSVFLKCNKLARLTHDP-DDVVKALRKSKLLEVTEDGTKVRRTVVVQD--KPDVDEC--- 197
+++ ++ R P +V+AL+ S+L+E+ +D VRR V + D K D
Sbjct: 143 LALLHSFKRMRRFQ--PFSAIVEALKTSELVELVDDDKAVRRKVPLPDTIKETADSSAVK 200
Query: 198 ---------TIYVEKLPPEAEHDY--IESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFS 246
+IY + PE IE+ F+ YG V L + KG FVEF
Sbjct: 201 VFEDKAMHRSIYAKGFGPEEPSTQFDIEAFFTPYGPTNAVRLRRAMDKT-FKGSVFVEFE 259
Query: 247 TKEEAAKALELGLNPCP 263
T E+ KA L + P P
Sbjct: 260 T-EDLQKAF-LAVEPKP 274
>gi|409993905|ref|ZP_11277031.1| RNA-binding region RNP-1 [Arthrospira platensis str. Paraca]
gi|291569285|dbj|BAI91557.1| RNA-binding protein [Arthrospira platensis NIES-39]
gi|409935253|gb|EKN76791.1| RNA-binding region RNP-1 [Arthrospira platensis str. Paraca]
Length = 103
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALEL 257
+IYV L E D + +VF++YG V V LP + TG+++GF FVE T+ E A++
Sbjct: 2 SIYVGNLSYEVTEDDLTAVFAEYGSVKRVKLPTDRETGRMRGFGFVEMDTEAEEQSAIDA 61
Query: 258 --GLNPCPPD 265
G C D
Sbjct: 62 LDGAEWCGRD 71
>gi|16330189|ref|NP_440917.1| RNA-binding protein [Synechocystis sp. PCC 6803]
gi|383321932|ref|YP_005382785.1| RNA-binding protein [Synechocystis sp. PCC 6803 substr. GT-I]
gi|383325101|ref|YP_005385954.1| RNA-binding protein [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|383490985|ref|YP_005408661.1| RNA-binding protein [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|384436252|ref|YP_005650976.1| RNA-binding protein [Synechocystis sp. PCC 6803]
gi|451814348|ref|YP_007450800.1| RNA-binding protein [Synechocystis sp. PCC 6803]
gi|1652677|dbj|BAA17597.1| RNA-binding protein [Synechocystis sp. PCC 6803]
gi|339273284|dbj|BAK49771.1| RNA-binding protein [Synechocystis sp. PCC 6803]
gi|359271251|dbj|BAL28770.1| RNA-binding protein [Synechocystis sp. PCC 6803 substr. GT-I]
gi|359274421|dbj|BAL31939.1| RNA-binding protein [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|359277591|dbj|BAL35108.1| RNA-binding protein [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|407958098|dbj|BAM51338.1| RNA-binding protein [Synechocystis sp. PCC 6803]
gi|451780317|gb|AGF51286.1| RNA-binding protein [Synechocystis sp. PCC 6803]
Length = 83
Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/59 (44%), Positives = 38/59 (64%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
+IYV L +A D + +VFS+YG V V LP + TG+++GF FVE S+ +E A+E
Sbjct: 2 SIYVGNLSYQATEDDVLTVFSEYGTVKRVQLPTDRETGRMRGFGFVEMSSDKEEDAAIE 60
>gi|367014205|ref|XP_003681602.1| hypothetical protein TDEL_0E01480 [Torulaspora delbrueckii]
gi|359749263|emb|CCE92391.1| hypothetical protein TDEL_0E01480 [Torulaspora delbrueckii]
Length = 270
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 21/151 (13%)
Query: 111 QQIMNLMEFYLSDSNLRKDRFFSQLLQES----PEIEVSVFLKCNKLARLTHDPDDVVKA 166
QQ + +EFY S+ NL D+F ++++ P ++ F + K + D VV+A
Sbjct: 29 QQCLKQVEFYFSEFNLPYDKFLRMTVEKNDGWVPITTIATFNRMKKFRPV----DKVVEA 84
Query: 167 LRKSKLLEVTEDGTKVRRTV------VVQDKPDVDECTIYVEKLPPE------AEHDYIE 214
LR+SK+L V+EDG +RR + + ++ T+ V P E A + +E
Sbjct: 85 LRESKILTVSEDGENIRRNEPLDFEGAKNARLEQNKRTLAVMNFPHENVEDMTALQEKLE 144
Query: 215 SVFSKYGKVTYVSLPKFKSTGKLKGFAFVEF 245
F K+ ++ V L + T K G A V+F
Sbjct: 145 EFFGKFFEINQVRLRR-DHTKKFNGTAIVQF 174
Score = 41.2 bits (95), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 8/73 (10%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQES----PEIEVSVFLKCNKLARLTHDPDDVVKALRKSKL 56
+EFY S+ NL D+F ++++ P ++ F + K + D VV+ALR+SK+
Sbjct: 35 VEFYFSEFNLPYDKFLRMTVEKNDGWVPITTIATFNRMKKFRPV----DKVVEALRESKI 90
Query: 57 LEVTEDGTKVKGN 69
L V+EDG ++ N
Sbjct: 91 LTVSEDGENIRRN 103
>gi|328700323|ref|XP_003241220.1| PREDICTED: la protein homolog [Acyrthosiphon pisum]
Length = 204
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 75/156 (48%), Gaps = 13/156 (8%)
Query: 112 QIMNLMEFYLSDSNLRKDRFF-SQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKS 170
+I+ +EFY SD+NL D+F +++ + +SV L L +T D + A++ +
Sbjct: 17 RIVKQLEFYFSDTNLPYDKFLQAKIRLNDGWVPISVLLTFKMLKSITRDSAVIASAVKDA 76
Query: 171 --KLLEVTEDGTKVRRTV-VVQDKP------DVDECTIYVEKLPPEAEHDYIESVFSKYG 221
++EV E G K+RR + P D+ + +IY P D + + +G
Sbjct: 77 VDSIVEVDETGLKIRRKPKIAAPAPDRRLFKDIVQRSIYCSGFPRTTTVDELLEFAATFG 136
Query: 222 K--VTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKAL 255
+T + +FKS KG + FSTK+EA K L
Sbjct: 137 DNVITKTTPMRFKSQA-FKGSLYFTFSTKDEAEKFL 171
>gi|326499932|dbj|BAJ90801.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 647
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
Query: 108 QLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKAL 167
+L +I+ +E+Y SD+NL +D F L+ E + +S N+L R+T D +V L
Sbjct: 329 ELRAKILAQVEYYFSDTNLERDGFLKSLMDEQGWVPISKVADFNRLKRITTDVHLIVDVL 388
Query: 168 RKSKLLEVTEDGTKVRR 184
S LLEV +D K+RR
Sbjct: 389 ASSNLLEVQDD--KIRR 403
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEVT 60
+E+Y SD+NL +D F L+ E + +S N+L R+T D +V L S LLEV
Sbjct: 338 VEYYFSDTNLERDGFLKSLMDEQGWVPISKVADFNRLKRITTDVHLIVDVLASSNLLEVQ 397
Query: 61 ED 62
+D
Sbjct: 398 DD 399
>gi|254424446|ref|ZP_05038164.1| RNA-binding protein, putative [Synechococcus sp. PCC 7335]
gi|196191935|gb|EDX86899.1| RNA-binding protein, putative [Synechococcus sp. PCC 7335]
Length = 84
Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 37/58 (63%)
Query: 199 IYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
+YV L + D + SVF +YG V V+LP + TG+++GFAFV+ S+ EE A+E
Sbjct: 3 VYVGNLSYDVTQDDLNSVFGEYGTVKRVTLPTDRETGRVRGFAFVDLSSDEEEQAAIE 60
>gi|355702596|gb|AES01984.1| MKI67 interacting nucleolar phosphoprotein [Mustela putorius furo]
Length = 300
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 183 RRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAF 242
RR Q+K + IYV LPP I + FS++G VT L + K TG KG+AF
Sbjct: 31 RRATQRQEKEKLTPGVIYVGHLPPALYETQIRAYFSQFGTVTKFRLSRSKRTGNSKGYAF 90
Query: 243 VEFSTKEEAAKALELGLN 260
VEF++ E+ AK + +N
Sbjct: 91 VEFAS-EDVAKIVADTMN 107
>gi|356573308|ref|XP_003554804.1| PREDICTED: uncharacterized protein LOC100813426 isoform 2 [Glycine
max]
Length = 451
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 58/121 (47%), Gaps = 6/121 (4%)
Query: 111 QQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALR 168
Q+I+N +E+Y SD NL + + + PE + +SV K+ L + LR
Sbjct: 152 QKILNQVEYYFSDLNLATTDHLMRFVNKDPEGFVPISVVASFKKIKALIASHSQLATVLR 211
Query: 169 KSKLLEVTEDGTKVRRTVVVQDKPDVDEC---TIYVEKLPPEAEHDYIESVFSKYGKVTY 225
S L V+EDG K++R + + D++E + E LP + H + VFS G V
Sbjct: 212 NSSKLVVSEDGKKIKRQYPLTES-DIEEIQSRIVVAENLPEDHCHQNLMKVFSAVGSVKT 270
Query: 226 V 226
+
Sbjct: 271 I 271
>gi|113953042|ref|YP_730260.1| RNA-binding protein [Synechococcus sp. CC9311]
gi|113880393|gb|ABI45351.1| putative RNA-binding protein [Synechococcus sp. CC9311]
Length = 126
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 38/60 (63%)
Query: 197 CTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
TIY+ L +AE + + +F +YG+V SLP + TG+ +GF FVE +T E+ KA++
Sbjct: 1 MTIYIGNLSFQAEQEDLLDLFGQYGEVKSASLPLDRETGRKRGFGFVEMATDEDEQKAID 60
>gi|6226777|sp|O17310.1|SXL_MUSDO RecName: Full=Sex-lethal homolog
gi|2565364|gb|AAB81986.1| Sex-lethal protein [Musca domestica]
Length = 324
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 53/102 (51%), Gaps = 6/102 (5%)
Query: 176 TEDGTKVR--RTVVVQDKP---DVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPK 230
T +G VR R V +P + + +YV LP D +E +F KYG + ++ +
Sbjct: 162 TVNGITVRNKRLKVSYARPGGESIKDTNLYVTNLPRTITDDELEKIFGKYGNIVQKNILR 221
Query: 231 FKSTGKLKGFAFVEFSTKEEAAKALELGLNPCPPDYQSSILT 272
K TG+ +G AFV F+ +EEA +A+ LN P+ S LT
Sbjct: 222 DKLTGRPRGVAFVRFNKREEAQEAIS-ALNNVIPEGASQPLT 262
>gi|427709160|ref|YP_007051537.1| RNP-1 like RNA-binding protein [Nostoc sp. PCC 7107]
gi|427361665|gb|AFY44387.1| RNP-1 like RNA-binding protein [Nostoc sp. PCC 7107]
Length = 99
Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 35/59 (59%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
++YV L E D + +VF++YG V + LP + TG+++GF FVE T E A+E
Sbjct: 2 SVYVGNLSYEVTEDSLSAVFAEYGSVKRIQLPTDRETGRMRGFGFVEMGTDAEETSAIE 60
>gi|328850756|gb|EGF99917.1| hypothetical protein MELLADRAFT_118186 [Melampsora larici-populina
98AG31]
Length = 667
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 37/62 (59%)
Query: 197 CTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
T+++ LP A D + FS+YG + V LP T ++KGF +VEF+T+E A A+
Sbjct: 501 TTLFIGNLPFSATQDSVYEAFSEYGDINSVRLPTDPETERIKGFGYVEFATQEAATAAVN 560
Query: 257 LG 258
+G
Sbjct: 561 VG 562
Score = 37.7 bits (86), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 49/97 (50%), Gaps = 3/97 (3%)
Query: 160 PDDVVKALRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSK 219
P+ V K+K TEDG+ + D D ++V L + D+++ F K
Sbjct: 367 PETPVAQNGKNKRKGDTEDGSAKKAKT---DDASGDIKNLFVGGLSWNVDDDWLKKEFEK 423
Query: 220 YGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
+G+V + + T + KGF +V+F++ E+A KA+E
Sbjct: 424 FGEVISARVITERGTERSKGFGYVDFASPEDARKAVE 460
>gi|218438646|ref|YP_002376975.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7424]
gi|218171374|gb|ACK70107.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7424]
Length = 105
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 35/60 (58%)
Query: 197 CTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
IYV L E D + VF++YG V+ V LP + TG+++GF FVE ST E A+E
Sbjct: 1 MAIYVGNLYYEVTQDELREVFAEYGTVSRVYLPVDRETGRMRGFGFVEMSTDAEEDTAIE 60
>gi|169854479|ref|XP_001833914.1| hypothetical protein CC1G_01591 [Coprinopsis cinerea okayama7#130]
gi|116505049|gb|EAU87944.1| hypothetical protein CC1G_01591 [Coprinopsis cinerea okayama7#130]
Length = 521
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 80/178 (44%), Gaps = 18/178 (10%)
Query: 98 KDGGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLAR 155
+DG + ++ QQ+ EFY +DSNL D+F L + PE I +S ++
Sbjct: 48 EDGEALAKMEKARQQV----EFYFADSNLPYDKFMWTLHTKDPEHWIPLSTIASFKRMRE 103
Query: 156 LTH-DPDDVVKALRKSKLLEVTED--------GTKVRRTVVVQDKPDVDECTIYVEKLPP 206
T + V+ ALR S LE+ E G +VRR V++ D E ++Y + P
Sbjct: 104 YTALGAEFVLNALRPSTFLELDESGREGAELAGVRVRRKTEVREVKDAFERSVYAKGFPE 163
Query: 207 EAE--HDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNPC 262
E +E F+ +GKV V + + + K K F EF+ E K L+ P
Sbjct: 164 EDPTLQKRLEEFFATFGKVNSVRMRRDEHK-KFKTSVFAEFADFETVDKFLKADPKPT 220
>gi|389633681|ref|XP_003714493.1| hypothetical protein MGG_01519 [Magnaporthe oryzae 70-15]
gi|351646826|gb|EHA54686.1| hypothetical protein MGG_01519 [Magnaporthe oryzae 70-15]
gi|440476427|gb|ELQ45024.1| hypothetical protein OOU_Y34scaffold00022g12 [Magnaporthe oryzae
Y34]
gi|440489087|gb|ELQ68767.1| hypothetical protein OOW_P131scaffold00219g24 [Magnaporthe oryzae
P131]
Length = 427
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 102/213 (47%), Gaps = 25/213 (11%)
Query: 79 SMETEASDNVDKDLSDLQRKDGGGRHR-------KKQLYQQIMNLMEFYLSDSNLRKDRF 131
S TE+SDN+ K + +DG + + +I +EFY SDSNL +D+F
Sbjct: 71 SATTESSDNILKTTAK-HSQDGSKNTKFDPSVLPESNDPNEIRKQVEFYFSDSNLSQDKF 129
Query: 132 -FSQLL-QESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEVTEDGTKVRRTVVVQ 189
++Q+ E+ +++SV ++ R + VV ALR+SK+L+V G T+V +
Sbjct: 130 LWTQVGGTENKPMKLSVIHNFGRMRRFKSY-EAVVAALRESKVLDVA--GEAGEETIVRK 186
Query: 190 DKPDVDE------CTIYVEKLPPEAEHDYI--ESVFSKYGKVTYVSLPKFKSTGK--LKG 239
+ D ++YV+ E I E F +G +S + + T K KG
Sbjct: 187 NAYDPARGNKSMVSSVYVKGFGDEEPDTQIKLEKFFGDFG--FEISSVRLRRTDKKLFKG 244
Query: 240 FAFVEFSTKEEAAKALELGLNPCPPDYQSSILT 272
FVEF++ EEA K LEL P D+ I++
Sbjct: 245 SVFVEFASPEEAKKFLELDPKPKWQDHDLKIMS 277
>gi|82593902|ref|XP_725199.1| eukaryotic translation initiation factor 3 p42 [Plasmodium yoelii
yoelii 17XNL]
gi|23480115|gb|EAA16764.1| eukaryotic translation initiation factor 3 p42 [Plasmodium yoelii
yoelii]
Length = 300
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 12/97 (12%)
Query: 160 PDDVVKALRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSK 219
PDD KA K ++ R+ Q+K ECTI V L + + ++F +
Sbjct: 194 PDDANKAGAKRDMM--------YYRSHDTQNK----ECTIRVTNLSEDVNESELSNLFGR 241
Query: 220 YGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
G+++ + L K K T KGFAF+ +S +EEA +A+E
Sbjct: 242 VGQISRMFLAKHKETQNSKGFAFITYSKREEAKRAIE 278
>gi|326427500|gb|EGD73070.1| hypothetical protein PTSG_12213 [Salpingoeca sp. ATCC 50818]
Length = 1010
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Query: 175 VTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKST 234
+T D K R V D + T++V + ++ HD ++ + S++G V Y L K K T
Sbjct: 571 LTIDRAKSRNETRVADA--TEGHTVFVRDMSLDSTHDDLKELMSQFGTVKYALLVKDKQT 628
Query: 235 GKLKGFAFVEFSTKEEAAKALELGLNPCPP 264
+G AFV FS+KEEA LE NP P
Sbjct: 629 DLPRGTAFVRFSSKEEADACLEAASNPDAP 658
Score = 38.1 bits (87), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 33/63 (52%)
Query: 194 VDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAK 253
D T++V+ +P + + +F +G+ Y + + +G+ +G FV+F TKE A
Sbjct: 495 ADGRTLFVDHIPTSVKTPRMVKLFHAFGETVYCRILRDHESGESRGRGFVKFKTKEAADA 554
Query: 254 ALE 256
LE
Sbjct: 555 CLE 557
>gi|145341707|ref|XP_001415946.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576169|gb|ABO94238.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 355
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 80/174 (45%), Gaps = 34/174 (19%)
Query: 112 QIMNLMEFYLSDSNLRKDRFF----SQLLQESPEIEVSV-----------FLKCNKLARL 156
++ +EFYL DSNL +D F S+ ++E E V + FL
Sbjct: 52 RVRAQIEFYLGDSNLPRDAFLLDEVSRAVREGHEGGVPIALIASFSRMRDFLAAYGGKDE 111
Query: 157 THDPDDVVKALRKSKLLEVTEDGTKVRR--TVVVQDKPDV---DECTIY----VEKL--- 204
+ + V +AL S ++E DGT+VRR +V + PD+ D T Y VE+L
Sbjct: 112 AKNVERVARALEGSDVVEACADGTRVRRKSMLVNGETPDLATDDGVTAYRSAMVEELDKR 171
Query: 205 ----PPEAEHDYIESV---FSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEA 251
P A+ IE++ F G + L + ++ +G FVEF+T+EEA
Sbjct: 172 FVFASPFAKDATIEALLAYFKTVGNARSIRLRRHTTSKDFRGSIFVEFATEEEA 225
>gi|352093687|ref|ZP_08954858.1| RNP-1 like RNA-binding protein [Synechococcus sp. WH 8016]
gi|351680027|gb|EHA63159.1| RNP-1 like RNA-binding protein [Synechococcus sp. WH 8016]
Length = 118
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 38/60 (63%)
Query: 197 CTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
TIY+ L +AE + + +F +YG+V SLP + TG+ +GF FVE +T E+ KA++
Sbjct: 1 MTIYIGNLSFQAEQEDLLDLFGQYGEVKSASLPLDRETGRKRGFGFVEMATDEDEQKAID 60
>gi|443477523|ref|ZP_21067364.1| RNP-1 like RNA-binding protein [Pseudanabaena biceps PCC 7429]
gi|443017338|gb|ELS31803.1| RNP-1 like RNA-binding protein [Pseudanabaena biceps PCC 7429]
Length = 111
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 34/59 (57%)
Query: 197 CTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKAL 255
+IYV L E D+++ VF YGKVT V P + TG+ +GFAFVE S E A+
Sbjct: 1 MSIYVGNLSYEVTQDHLKPVFEDYGKVTRVHFPTDRETGRARGFAFVEMSQDAEEDAAI 59
>gi|326469905|gb|EGD93914.1| RNA-binding La domain-containing protein [Trichophyton tonsurans
CBS 112818]
gi|326479128|gb|EGE03138.1| lupus La protein [Trichophyton equinum CBS 127.97]
Length = 419
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 87/197 (44%), Gaps = 33/197 (16%)
Query: 86 DNVDKDLSDLQRKDGGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLL--QESPEIE 143
DN+ D S L+ D RK+ +EFY SDSNL D+F + E+ +E
Sbjct: 97 DNIKSDPSSLEETDDPVEIRKQ---------VEFYFSDSNLPMDKFLLSKVGGSENRPVE 147
Query: 144 VSVFLKCNKLARLTHDP-DDVVKALRKSKLLEVTEDGTKVRRTVVVQD--KPDVDEC--- 197
+S+ ++ R P +V+AL+ S+L+E+ D VRR V + D K D
Sbjct: 148 LSLLHSFKRMRRFQ--PFSAIVEALKSSELVELVNDDKAVRRKVPLPDTIKETADSSAVK 205
Query: 198 ---------TIYVEKLPPEAEHDY--IESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFS 246
+IY + PE IE+ F+ YG V L + KG FVEF
Sbjct: 206 VFEDKAMHRSIYAKGFGPEEPSTQFDIEAFFTPYGPTNAVRLRRAMDK-TFKGSVFVEFE 264
Query: 247 TKEEAAKALELGLNPCP 263
T E+ KA L + P P
Sbjct: 265 T-EDLQKAF-LAIEPKP 279
>gi|302500278|ref|XP_003012133.1| hypothetical protein ARB_01641 [Arthroderma benhamiae CBS 112371]
gi|291175689|gb|EFE31493.1| hypothetical protein ARB_01641 [Arthroderma benhamiae CBS 112371]
Length = 419
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 88/197 (44%), Gaps = 33/197 (16%)
Query: 86 DNVDKDLSDLQRKDGGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLL--QESPEIE 143
DN+ D S L+ D RK+ +EFY SDSNL D+F + E+ +E
Sbjct: 96 DNIKSDPSSLEETDDPVEIRKQ---------VEFYFSDSNLPMDKFLLSKVGGSENRPVE 146
Query: 144 VSVFLKCNKLARLTHDP-DDVVKALRKSKLLEVTEDGTKVRRTVVVQD--KPDVDEC--- 197
+S+ ++ R P +V+AL+ S+L+E+ +D VRR V + D K D
Sbjct: 147 LSLLHSFKRMRRFQ--PFSAIVEALKGSELVELVDDDKAVRRKVPLPDTIKETADSSAVK 204
Query: 198 ---------TIYVEKLPPEAEHDY--IESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFS 246
+IY + PE IE+ F+ YG V L + KG FVEF
Sbjct: 205 IFEDKAMHRSIYAKGFGPEEPSTQFDIEAFFTPYGPTNAVRLRRAMDK-TFKGSVFVEFE 263
Query: 247 TKEEAAKALELGLNPCP 263
T E+ KA L + P P
Sbjct: 264 T-EDLQKAF-LAIEPKP 278
>gi|337457|gb|AAA36577.1| ribonucleoprotein La, partial [Homo sapiens]
Length = 355
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 62/115 (53%), Gaps = 10/115 (8%)
Query: 151 NKLARLTHDPDDVVKALRKSK--LLEVTEDGTKVRRT-------VVVQDKPDVDECTIYV 201
N+L RLT D + +V+AL KSK L+E++ED TK+RR+ V + K DV ++Y+
Sbjct: 3 NRLNRLTTDFNVIVEALSKSKAELMEISEDKTKIRRSPSKPLPEVTDEYKNDVKNRSVYI 62
Query: 202 EKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
+ P +A D I+ G+V + + + KG FV F + E A K +E
Sbjct: 63 KGFPTDATLDDIKEWLEDKGQVLNIQMRRTLHKA-FKGSIFVVFDSIESAKKFVE 116
>gi|326528603|dbj|BAJ97323.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 960
Score = 53.1 bits (126), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
Query: 108 QLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKAL 167
+L +I+ +E+Y SD+NL +D F L+ E + +S N+L R+T D +V L
Sbjct: 329 ELRAKILAQVEYYFSDTNLERDGFLKSLMDEQGWVPISKVADFNRLKRITTDVHLIVDVL 388
Query: 168 RKSKLLEVTEDGTKVRR 184
S LLEV +D K+RR
Sbjct: 389 ASSNLLEVQDD--KIRR 403
Score = 48.1 bits (113), Expect = 0.005, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 38/69 (55%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEVT 60
+E+Y SD+NL +D F L+ E + +S N+L R+T D +V L S LLEV
Sbjct: 338 VEYYFSDTNLERDGFLKSLMDEQGWVPISKVADFNRLKRITTDVHLIVDVLASSNLLEVQ 397
Query: 61 EDGTKVKGN 69
+D + + +
Sbjct: 398 DDKIRRRSD 406
>gi|257206536|emb|CAX82896.1| hypothetical protein [Schistosoma japonicum]
Length = 215
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 85/170 (50%), Gaps = 26/170 (15%)
Query: 112 QIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRK 169
+I+ EFY SD+N+ KD+F +L++ S E ++++V K+ L+ D + K+L
Sbjct: 34 KIVKQCEFYFSDANILKDQFLLKLVKSSKEGWVDLTVVANFKKMQSLSKDISVIRKSLAA 93
Query: 170 SKLLEVTEDGTKVRRTVVVQDKPDVDEC----TIYVEKLPPEAE--HDYIESVFSKYG-- 221
S L++++DG VRR ++ P+ D+ +I + P A + I+ F+K G
Sbjct: 94 STKLQISDDGKTVRR---IEPLPEWDKAVYFRSIILSDFPDSASVTVESIQEFFTKNGYP 150
Query: 222 ----KVTYVSL---PKFKSTGKL------KGFAFVEFSTKEEAAKALELG 258
+V Y + P K + L K A VEF + +A++A+ L
Sbjct: 151 PSLVRVLYPNRKVPPDLKRSQILHNQLGVKTCAVVEFPNRSDASEAISLS 200
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 42/68 (61%), Gaps = 2/68 (2%)
Query: 2 EFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEV 59
EFY SD+N+ KD+F +L++ S E ++++V K+ L+ D + K+L S L++
Sbjct: 40 EFYFSDANILKDQFLLKLVKSSKEGWVDLTVVANFKKMQSLSKDISVIRKSLAASTKLQI 99
Query: 60 TEDGTKVK 67
++DG V+
Sbjct: 100 SDDGKTVR 107
>gi|326517876|dbj|BAK07190.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 345
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 38/58 (65%)
Query: 199 IYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
+YV LPP A+ D ++ FS+YG V V + + TG+ +GFAFVEF+ +E A AL+
Sbjct: 8 LYVGGLPPSAQQDELKDHFSRYGDVLCVRVVRDWETGQGRGFAFVEFADEEGAHAALQ 65
>gi|166365958|ref|YP_001658231.1| RNA binding protein [Microcystis aeruginosa NIES-843]
gi|425466552|ref|ZP_18845850.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9809]
gi|166088331|dbj|BAG03039.1| RNA binding protein [Microcystis aeruginosa NIES-843]
gi|389830907|emb|CCI26790.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9809]
Length = 98
Score = 53.1 bits (126), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 37/58 (63%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKAL 255
+IYV LP E + D + VF +YG++ V LP + T + +GFAFVE T E+ AKA+
Sbjct: 2 SIYVGNLPFEVDQDDVVEVFKEYGEIKRVHLPMDRETKRKRGFAFVEMETPEQEAKAI 59
>gi|307154466|ref|YP_003889850.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7822]
gi|306984694|gb|ADN16575.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7822]
Length = 98
Score = 53.1 bits (126), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/58 (48%), Positives = 34/58 (58%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKAL 255
+IYV LP E E ++ VFS YGKV V LP + TG +GFAFVE T E A+
Sbjct: 2 SIYVGNLPHEVEDKHLSEVFSDYGKVNRVYLPTDRETGLRRGFAFVEMETPEMEDAAI 59
>gi|19114227|ref|NP_593315.1| La-motif domain-containing protein [Schizosaccharomyces pombe
972h-]
gi|3287868|sp|P87058.1|LAH1_SCHPO RecName: Full=La protein homolog; AltName: Full=La autoantigen
homolog; AltName: Full=La ribonucleoprotein
gi|2058377|emb|CAB08173.1| La protein homolog [Schizosaccharomyces pombe]
Length = 298
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 85/178 (47%), Gaps = 16/178 (8%)
Query: 112 QIMNLMEFYLSDSNLRKDRFFSQLLQES----PEIEVSVFLKCNKLARLTHDPDDVVKAL 167
+++ +EFY SD+NL D+F Q++ P ++ F + + L + +V AL
Sbjct: 66 EVLKQVEFYFSDTNLPHDKFLWTTSQKNDGWVPIQTIANFKRMRRFQPL----EAIVNAL 121
Query: 168 RKS-KLLEVTEDGTKVRRTV--VVQDKPDVDECTIYVEKLPPEAEHDYI--ESVFSK-YG 221
RKS +LLEV E G KVRR + V D V E ++Y + E + I E F + G
Sbjct: 122 RKSPELLEVDEAGEKVRRMIPLVRVDNKSVMERSVYCKGFGDEKDDTQIALEKFFEENAG 181
Query: 222 KVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNPCPPDYQSSILTTTSRLSF 279
++ V + + K KG FVEF + A K LE + P + LT S+ +
Sbjct: 182 PISAVRMRR-DDDKKFKGSVFVEFKEPDVANKFLE-KVKTAPLKWGEDELTIMSKKEY 237
>gi|357017085|gb|AET50571.1| hypothetical protein [Eimeria tenella]
Length = 527
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 EDGTKVRRT-VVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTG 235
E GTK ++ V P +C +Y++ LPPE D + + ++GK+ ++L K + TG
Sbjct: 278 ERGTKPQQNEVRATAPPRSADCKLYIQNLPPEMGEDQVRDLLEQFGKLRVLNLIKNRQTG 337
Query: 236 KLKGFAFVEFSTKEEAAKALE 256
K +G+ F E+ E +A+E
Sbjct: 338 KHRGYGFFEYEDPEVTDQAIE 358
>gi|354568550|ref|ZP_08987714.1| RNP-1 like RNA-binding protein [Fischerella sp. JSC-11]
gi|353540273|gb|EHC09750.1| RNP-1 like RNA-binding protein [Fischerella sp. JSC-11]
Length = 106
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%)
Query: 197 CTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
+IYV L + + + VF++YG V V LP + TG+++GFAFVE + EE +A+E
Sbjct: 1 MSIYVGNLSYQVREEDLREVFAEYGTVKKVQLPTDRDTGRVRGFAFVEMQSDEEEERAIE 60
>gi|389739048|gb|EIM80243.1| hypothetical protein STEHIDRAFT_163114 [Stereum hirsutum FP-91666
SS1]
Length = 633
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 67/137 (48%), Gaps = 9/137 (6%)
Query: 117 MEFYLSDSNLRKDRFFSQLLQES-----PEIEVSVFLKCNKLARLTHDPDDVVKALRKSK 171
+EFY +DSNL DRF L ++ P V+ F + + + + LR S+
Sbjct: 55 VEFYFADSNLPYDRFMWTLHTKNLDHWVPLETVASFKRMREYTQALGL-PALAALLRTSE 113
Query: 172 LLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAE--HDYIESVFSKYGKVTYVSLP 229
LEV E+G VRR VQ+ E ++Y + P E+E +E F K+GKV V +
Sbjct: 114 ELEVDEEGKNVRRKKEVQEPKGQWERSVYAKGFPDESEGLQRELEKFFEKWGKVNAVRMR 173
Query: 230 KFKSTGKLKGFAFVEFS 246
+ + K K FVEF+
Sbjct: 174 RDEHK-KFKNSVFVEFA 189
>gi|221053616|ref|XP_002258182.1| eukaryotictranslation initiation factor [Plasmodium knowlesi strain
H]
gi|193808015|emb|CAQ38719.1| eukaryotictranslation initiation factor,putative [Plasmodium
knowlesi strain H]
Length = 269
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 37/61 (60%)
Query: 196 ECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKAL 255
ECT+ V L E + ++F + G+++ + L K K T KGFAF+ +S +EEA +A+
Sbjct: 187 ECTVRVTNLSEEVNESELSNLFGRVGQISRMFLAKHKETQNSKGFAFITYSNREEAKRAI 246
Query: 256 E 256
E
Sbjct: 247 E 247
>gi|407920874|gb|EKG14053.1| hypothetical protein MPH_08795 [Macrophomina phaseolina MS6]
Length = 421
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 78/173 (45%), Gaps = 28/173 (16%)
Query: 112 QIMNLMEFYLSDSNLRKDRFFSQLLQ--ESPEIEVSVFLKCNKLARLTHDP-DDVVKALR 168
QI +EFY SDSNL D++ + E+ I + V +++ R P VV A++
Sbjct: 95 QIRKQIEFYFSDSNLPMDKYLMNQVGGYENKPIPLKVLHSFSRMRRFQ--PYSAVVDAIK 152
Query: 169 KSKLLEVTEDGTKVRRTV----------------VVQDKPDVDECTIYVEKLPPEAEHDY 212
+S +E+TE G +VRR V V+ DK +IY + E E
Sbjct: 153 ESDFVELTE-GEEVRRKVPLDEKFGNSYNDNHVRVIDDK--TQPRSIYAKGFGEETEMTQ 209
Query: 213 --IESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNPCP 263
IE F +YG + V L + K KG FVEF EE K L L+P P
Sbjct: 210 FNIEKFFMQYGTINSVRLRRSYPDKKFKGSVFVEFED-EETQKNF-LALDPKP 260
>gi|354566092|ref|ZP_08985265.1| RNP-1 like RNA-binding protein [Fischerella sp. JSC-11]
gi|353546600|gb|EHC16048.1| RNP-1 like RNA-binding protein [Fischerella sp. JSC-11]
Length = 84
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 37/58 (63%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKAL 255
+IYV L E + D ++ +FSKYG V V LP +++TG+ + FAFVE T E A A+
Sbjct: 2 SIYVSNLSDEIQEDDLKQMFSKYGSVVKVRLPIYRATGERRRFAFVEMETDAEEAVAI 59
>gi|2570521|gb|AAB82145.1| La autoantigen homolog [Schizosaccharomyces pombe]
gi|2913895|dbj|BAA24981.1| SLA1 [Schizosaccharomyces pombe]
Length = 298
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 85/178 (47%), Gaps = 16/178 (8%)
Query: 112 QIMNLMEFYLSDSNLRKDRFFSQLLQES----PEIEVSVFLKCNKLARLTHDPDDVVKAL 167
+++ +EFY SD+NL D+F Q++ P ++ F + + L + +V AL
Sbjct: 66 EVLKQVEFYFSDTNLPHDKFLWTTSQKNDGWVPIQTIANFKRMRRFQPL----EAIVNAL 121
Query: 168 RKS-KLLEVTEDGTKVRRTV--VVQDKPDVDECTIYVEKLPPEAEHDYI--ESVFSK-YG 221
RKS +LLEV E G KVRR + V D V E ++Y + E + I E F + G
Sbjct: 122 RKSPELLEVDEAGEKVRRMIPLVRVDNKSVMERSVYCKGFGDEKDDTQIALEKFFEENAG 181
Query: 222 KVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNPCPPDYQSSILTTTSRLSF 279
++ V + + K KG FVEF + A K LE + P + LT S+ +
Sbjct: 182 PISAVRIRR-DDDKKFKGSVFVEFKEPDVANKFLE-KVKTAPLKWGEDELTIMSKKEY 237
>gi|171912058|ref|ZP_02927528.1| RNA-binding region RNP-1 [Verrucomicrobium spinosum DSM 4136]
Length = 150
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 199 IYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELG 258
+YV L A + +FS+YG VT VSLP + TG+ +GFAFV TKE A++ G
Sbjct: 5 MYVGNLAWSATEQDVRELFSQYGAVTEVSLPTDRDTGRPRGFAFVAMDTKEAMDAAIK-G 63
Query: 259 LN 260
LN
Sbjct: 64 LN 65
>gi|332710459|ref|ZP_08430406.1| RRM domain RNA-binding protein [Moorea producens 3L]
gi|332350790|gb|EGJ30383.1| RRM domain RNA-binding protein [Moorea producens 3L]
Length = 93
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 37/59 (62%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
TIYV L +A D +++VF YG V V +P + TGK++GFAFVE + ++ A+E
Sbjct: 2 TIYVGNLSYQATEDDLKTVFGDYGTVKRVVMPTDRETGKMRGFAFVEMTESDQEDSAIE 60
>gi|308505028|ref|XP_003114697.1| CRE-LARP-5 protein [Caenorhabditis remanei]
gi|308258879|gb|EFP02832.1| CRE-LARP-5 protein [Caenorhabditis remanei]
Length = 705
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 70/135 (51%), Gaps = 14/135 (10%)
Query: 108 QLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKAL 167
+L QQ+ + +E+Y S NL DRF + + + V K+ RLT+D D +V+AL
Sbjct: 35 ELKQQLRSQLEYYFSRENLISDRFLKIQMDADQFVPIHVVAGFPKVRRLTNDVDLIVEAL 94
Query: 168 RKSKLLEVTEDGTKV-----RRTVVVQDKPD--VDECTIYVEKLPPEAEHDY--IESVFS 218
R S ++E+ E+ KV R T+++++ P+ +E +E PP E Y +S +
Sbjct: 95 RDSTVVEMDENCEKVRPITKRTTIIIREIPEEYREEVVKLLEDGPPFTELKYGLNDSWYV 154
Query: 219 KY-----GKVTYVSL 228
Y +V YVS+
Sbjct: 155 TYDNELDTQVAYVSV 169
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEVT 60
+E+Y S NL DRF + + + V K+ RLT+D D +V+ALR S ++E+
Sbjct: 44 LEYYFSRENLISDRFLKIQMDADQFVPIHVVAGFPKVRRLTNDVDLIVEALRDSTVVEMD 103
Query: 61 EDGTKVKGNIIRHFLVPISMETEASDNVDKDLSD 94
E+ KV+ R ++ + E + V K L D
Sbjct: 104 ENCEKVRPITKRTTIIIREIPEEYREEVVKLLED 137
>gi|226472590|emb|CAX70981.1| hypothetical protein [Schistosoma japonicum]
gi|226472592|emb|CAX70982.1| hypothetical protein [Schistosoma japonicum]
Length = 326
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 85/170 (50%), Gaps = 26/170 (15%)
Query: 112 QIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRK 169
+I+ EFY SD+N+ KD+F +L++ S E ++++V K+ L+ D + K+L
Sbjct: 34 KIVKQCEFYFSDANILKDQFLLKLVKSSKEGWVDLTVVANFKKMQSLSKDISVIRKSLAA 93
Query: 170 SKLLEVTEDGTKVRRTVVVQDKPDVDEC----TIYVEKLPPEAE--HDYIESVFSKYG-- 221
S L++++DG VRR ++ P+ D+ +I + P A + I+ F+K G
Sbjct: 94 STKLQISDDGKTVRR---IEPLPEWDKAVYFRSIILSDFPDGASVTVESIQEFFTKNGYP 150
Query: 222 ----KVTYVSL---PKFKSTGKL------KGFAFVEFSTKEEAAKALELG 258
+V Y + P K + L K A VEF + +A++A+ L
Sbjct: 151 PSLVRVLYPNRKVPPDLKRSQILHNQLGVKTCAVVEFPNRTDASEAISLS 200
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 42/68 (61%), Gaps = 2/68 (2%)
Query: 2 EFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEV 59
EFY SD+N+ KD+F +L++ S E ++++V K+ L+ D + K+L S L++
Sbjct: 40 EFYFSDANILKDQFLLKLVKSSKEGWVDLTVVANFKKMQSLSKDISVIRKSLAASTKLQI 99
Query: 60 TEDGTKVK 67
++DG V+
Sbjct: 100 SDDGKTVR 107
>gi|225678061|gb|EEH16345.1| polyadenylate-binding protein [Paracoccidioides brasiliensis Pb03]
Length = 755
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 35/59 (59%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
+YV+ L PE ++ +F KYG++T SL + TGK +GF FV F + AA A+E
Sbjct: 236 NVYVKNLEPEVTNEEFRELFEKYGEITSASLSRDNETGKSRGFGFVNFVNHDSAAAAVE 294
>gi|255576440|ref|XP_002529112.1| lupus la ribonucleoprotein, putative [Ricinus communis]
gi|223531463|gb|EEF33296.1| lupus la ribonucleoprotein, putative [Ricinus communis]
Length = 524
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 78/175 (44%), Gaps = 23/175 (13%)
Query: 103 RHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDP 160
R+ + Q+++N +E+Y SD NL + + + P+ + +SV K+ +
Sbjct: 196 RNGNDEPMQKLLNQVEYYFSDLNLATTDHLMRFINKDPDGYVPISVVASFKKVKAAINSN 255
Query: 161 DDVVKALRKSKLLEVTEDGTKVRRTVVVQDKPDVDECT---IYVEKLPPEAEHDYIESVF 217
+ LR S L V+EDG +VRR + + DV+E + E LP + H + +F
Sbjct: 256 SHLASILRNSAKLVVSEDGKRVRRQNPLTEL-DVEELQSRIVVAENLPEDHCHQNLMKIF 314
Query: 218 SKYGKV-TYVSLPKFKSTG-------KLKG---------FAFVEFSTKEEAAKAL 255
S G V T + P S G KG AFVE+ + E A KA+
Sbjct: 315 SAVGSVKTIRTCPPQTSGGGASSASRSAKGEGMHFSNKLHAFVEYESVEIAEKAV 369
>gi|145541656|ref|XP_001456516.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124424328|emb|CAK89119.1| unnamed protein product [Paramecium tetraurelia]
Length = 351
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
Query: 111 QQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALR 168
++I +E+YLSD NL +D FF + + ++ + +++ LKCNK+ ++ + +V+A++
Sbjct: 4 EEIKKQVEYYLSDKNLSQDEFFHKQITQNQDGYLQLQFILKCNKVKQMKVTQEQLVEAIK 63
Query: 169 KSKLLEVTEDGTKVRRT 185
S +E++ D T VRR+
Sbjct: 64 TSTEVELSPDSTSVRRS 80
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 45/69 (65%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
+E+YLSD NL +D FF + + ++ + +++ LKCNK+ ++ + +V+A++ S +E
Sbjct: 10 VEYYLSDKNLSQDEFFHKQITQNQDGYLQLQFILKCNKVKQMKVTQEQLVEAIKTSTEVE 69
Query: 59 VTEDGTKVK 67
++ D T V+
Sbjct: 70 LSPDSTSVR 78
>gi|378776211|ref|YP_005184641.1| RNA binding protein, cold-inducible rrm [Legionella pneumophila
subsp. pneumophila ATCC 43290]
gi|364507018|gb|AEW50542.1| RNA binding protein, cold-inducible rrm [Legionella pneumophila
subsp. pneumophila ATCC 43290]
Length = 112
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 38/63 (60%)
Query: 199 IYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELG 258
IYV LP + + FS+YGK+ + L K + TG++KGF F+ FS ++EA ALE+
Sbjct: 27 IYVGNLPFGTTEEALSIQFSQYGKIEEMFLIKDRLTGQMKGFGFITFSAQQEAESALEMN 86
Query: 259 LNP 261
P
Sbjct: 87 GQP 89
>gi|407038416|gb|EKE39116.1| RNA-binding protein TIA-1, putative [Entamoeba nuttalli P19]
Length = 306
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 35/59 (59%)
Query: 199 IYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALEL 257
I+V L PE D + F K+G+VT + KF TGK KG+ FV F KE+A A+++
Sbjct: 131 IFVGGLQPEVNDDLLYKTFQKFGRVTDARVLKFTQTGKSKGYGFVTFIRKEDAETAMQM 189
Score = 43.9 bits (102), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 36/68 (52%), Gaps = 6/68 (8%)
Query: 188 VQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFST 247
+ ++ CT+Y+ +P E D ++ + ++YG + V L K KG+AF++FS
Sbjct: 223 INNETSSQNCTVYIGNIPKNVESDDLKQLLAEYGSIEEVRL------NKDKGYAFIKFSK 276
Query: 248 KEEAAKAL 255
E A A+
Sbjct: 277 HESATSAI 284
>gi|226489558|emb|CAX75923.1| Enhancer of zeste homolog 1 (ENX-2) [Schistosoma japonicum]
Length = 376
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 76/156 (48%), Gaps = 9/156 (5%)
Query: 109 LYQQIMNLMEFYLSDSNLRKDRFFSQLL-QESPEIEVSVFLKCNKLARLTHDPDDVVKAL 167
L +I+ +E+Y D NL +D+F + + Q I + +K N+L L+ D + + K++
Sbjct: 7 LESKIIRQVEYYFGDVNLSRDKFMREAVKQNDGWISMETMIKFNRLKSLSEDAEFIKKSV 66
Query: 168 RKSK--LLEVTEDGTKVRRTVVVQDK-----PDVDECTIYVEKLPPEAEHDYIESVFSKY 220
KS+ L++V E+G + + V + + E ++YV+ + D I K+
Sbjct: 67 AKSQSGLVQVGENGLRRNPEMKVPETFESALENYKENSVYVKGFSSDENLDEIIEWLEKH 126
Query: 221 -GKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKAL 255
GK V + +F K +G F F KE++ K L
Sbjct: 127 GGKTIDVHMRRFPRDKKFRGSIFAIFEKKEDSEKFL 162
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLL-QESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--LL 57
+E+Y D NL +D+F + + Q I + +K N+L L+ D + + K++ KS+ L+
Sbjct: 15 VEYYFGDVNLSRDKFMREAVKQNDGWISMETMIKFNRLKSLSEDAEFIKKSVAKSQSGLV 74
Query: 58 EVTEDG 63
+V E+G
Sbjct: 75 QVGENG 80
>gi|326470511|gb|EGD94520.1| pre-mRNA splicing factor (Prp24) [Trichophyton tonsurans CBS
112818]
Length = 1279
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 65/131 (49%), Gaps = 13/131 (9%)
Query: 135 LLQESPEIEVSVFLK-CNKLARLTHDPDDVVKALRKSKLLEVTED----GTKVRRTV--- 186
L ++ P++++ F + C KL L P D AL + + ED GTK ++ +
Sbjct: 805 LPKDIPQVKIRQFFRDCGKLNALQMLPGDSGSALLE---FDTHEDALAAGTKNQKVLEGN 861
Query: 187 VVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFS 246
V +P V + TI+V PP A+ +YI +F YG++ V P K + F +V+F+
Sbjct: 862 QVTVEP-VTDTTIFVTNFPPTADENYIRELFHSYGEIAEVRFPSLKFNTHRR-FCYVQFT 919
Query: 247 TKEEAAKALEL 257
+ A A EL
Sbjct: 920 SSSSAYAATEL 930
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 199 IYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALEL 257
IYV +P + + +F+ YG V V +P K G+ +GF FV F+TK+++ AL +
Sbjct: 964 IYVCNIPYKTTEGDLVELFTAYGDVESVRIPT-KVNGETRGFGFVTFATKDQSTAALAM 1021
>gi|260833612|ref|XP_002611806.1| hypothetical protein BRAFLDRAFT_141671 [Branchiostoma floridae]
gi|229297178|gb|EEN67815.1| hypothetical protein BRAFLDRAFT_141671 [Branchiostoma floridae]
Length = 175
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 4/61 (6%)
Query: 195 DECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKA 254
++C IYV LPPE + I+ VF KYGK+ +V L G+ FAFVEF K +A A
Sbjct: 4 NDCRIYVGNLPPEVRQEDIKDVFYKYGKIIHVDL----KIGRGPPFAFVEFEDKRDADDA 59
Query: 255 L 255
+
Sbjct: 60 V 60
>gi|113478077|ref|YP_724138.1| RNA-binding region RNP-1 [Trichodesmium erythraeum IMS101]
gi|110169125|gb|ABG53665.1| RNA-binding region RNP-1 [Trichodesmium erythraeum IMS101]
Length = 102
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%)
Query: 197 CTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
+IYV L + D + VF++YG V V LP + TG+ +GF FVE S++ E KA+E
Sbjct: 1 MSIYVGNLSYDVTQDDLSEVFAEYGTVKRVQLPTDRETGRPRGFGFVEMSSENEEQKAIE 60
>gi|226471480|emb|CAX70821.1| Enhancer of zeste homolog 1 (ENX-2) [Schistosoma japonicum]
Length = 376
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 76/156 (48%), Gaps = 9/156 (5%)
Query: 109 LYQQIMNLMEFYLSDSNLRKDRFFSQLL-QESPEIEVSVFLKCNKLARLTHDPDDVVKAL 167
L +I+ +E+Y D NL +D+F + + Q I + +K N+L L+ D + + K++
Sbjct: 7 LESKIIRQVEYYFGDVNLSRDKFMREAVKQNDGWISMETMIKFNRLKSLSEDAEFIKKSV 66
Query: 168 RKSK--LLEVTEDGTKVRRTVVVQDK-----PDVDECTIYVEKLPPEAEHDYIESVFSKY 220
KS+ L++V E+G + + V + + E ++YV+ + D I K+
Sbjct: 67 AKSQSGLVQVGENGLRRNPEMKVPETFESALENYKENSVYVKGFSSDENLDEIIEWLEKH 126
Query: 221 -GKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKAL 255
GK V + +F K +G F F KE++ K L
Sbjct: 127 GGKTIDVHMRRFPRDKKFRGSIFAIFEKKEDSEKFL 162
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLL-QESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--LL 57
+E+Y D NL +D+F + + Q I + +K N+L L+ D + + K++ KS+ L+
Sbjct: 15 VEYYFGDVNLSRDKFMREAVKQNDGWISMETMIKFNRLKSLSEDAEFIKKSVAKSQSGLV 74
Query: 58 EVTEDG 63
+V E+G
Sbjct: 75 QVGENG 80
>gi|226471478|emb|CAX70820.1| Enhancer of zeste homolog 1 (ENX-2) [Schistosoma japonicum]
Length = 376
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 76/156 (48%), Gaps = 9/156 (5%)
Query: 109 LYQQIMNLMEFYLSDSNLRKDRFFSQLL-QESPEIEVSVFLKCNKLARLTHDPDDVVKAL 167
L +I+ +E+Y D NL +D+F + + Q I + +K N+L L+ D + + K++
Sbjct: 7 LESKIIRQVEYYFGDVNLSRDKFMREAVKQNDGWISMETMIKFNRLKSLSEDAEFIKKSV 66
Query: 168 RKSK--LLEVTEDGTKVRRTVVVQDK-----PDVDECTIYVEKLPPEAEHDYIESVFSKY 220
KS+ L++V E+G + + V + + E ++YV+ + D I K+
Sbjct: 67 AKSQSGLVQVGENGLRRNPEMKVPETFESALENYKENSVYVKGFSSDENLDEIIEWLEKH 126
Query: 221 -GKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKAL 255
GK V + +F K +G F F KE++ K L
Sbjct: 127 GGKTIDVHMRRFPRDKKFRGSIFAIFEKKEDSEKFL 162
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLL-QESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--LL 57
+E+Y D NL +D+F + + Q I + +K N+L L+ D + + K++ KS+ L+
Sbjct: 15 VEYYFGDVNLSRDKFMREAVKQNDGWISMETMIKFNRLKSLSEDAEFIKKSVAKSQSGLV 74
Query: 58 EVTEDG 63
+V E+G
Sbjct: 75 QVGENG 80
>gi|328773933|gb|EGF83970.1| hypothetical protein BATDEDRAFT_36405 [Batrachochytrium
dendrobatidis JAM81]
Length = 217
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 37/59 (62%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
+IYV +PP+A + F +YGKV + +PK G+ +GFA+V+F +E+A A+E
Sbjct: 5 SIYVRGVPPDASSSDLMEHFEEYGKVNDIYIPKSYHNGRPRGFAYVKFDKQEDAELAME 63
>gi|302655824|ref|XP_003019695.1| pre-mRNA splicing factor (Prp24), putative [Trichophyton verrucosum
HKI 0517]
gi|291183434|gb|EFE39050.1| pre-mRNA splicing factor (Prp24), putative [Trichophyton verrucosum
HKI 0517]
Length = 1402
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 65/135 (48%), Gaps = 13/135 (9%)
Query: 131 FFSQLLQESPEIEVSVFLK-CNKLARLTHDPDDVVKALRKSKLLEVTED----GTKVRRT 185
L ++ P++++ F + C KL L P D AL + + ED GTK ++
Sbjct: 913 IIKNLPKDIPQVKIRQFFRDCGKLNSLQMLPGDSGSALLE---FDTHEDALAAGTKNQKV 969
Query: 186 V---VVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAF 242
+ V +P V + TI+V PP A+ +YI +F YG++ V P K + F +
Sbjct: 970 LEGNQVTVEP-VTDTTIFVTNFPPTADENYIRELFHSYGEIAEVRFPSLKFNTHRR-FCY 1027
Query: 243 VEFSTKEEAAKALEL 257
V+F++ A A EL
Sbjct: 1028 VQFTSSSSAYAATEL 1042
>gi|302496478|ref|XP_003010240.1| pre-mRNA splicing factor (Prp24), putative [Arthroderma benhamiae CBS
112371]
gi|291173782|gb|EFE29600.1| pre-mRNA splicing factor (Prp24), putative [Arthroderma benhamiae CBS
112371]
Length = 1598
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 65/135 (48%), Gaps = 13/135 (9%)
Query: 131 FFSQLLQESPEIEVSVFLK-CNKLARLTHDPDDVVKALRKSKLLEVTED----GTKVRRT 185
L ++ P++++ F + C KL L P D AL + + ED GTK ++
Sbjct: 1109 IIKNLPKDIPQVKIRQFFRDCGKLNSLQMLPGDSGSALLE---FDTHEDALAAGTKNQKV 1165
Query: 186 V---VVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAF 242
+ V +P V + TI+V PP A+ +YI +F YG++ V P K + F +
Sbjct: 1166 LEGNQVTVEP-VTDTTIFVTNFPPTADENYIRELFHSYGEIAEVRFPSLKFNTHRR-FCY 1223
Query: 243 VEFSTKEEAAKALEL 257
V+F++ A A EL
Sbjct: 1224 VQFTSSSSAYAATEL 1238
>gi|295674319|ref|XP_002797705.1| polyadenylate-binding protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226280355|gb|EEH35921.1| polyadenylate-binding protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 822
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 35/60 (58%)
Query: 197 CTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
+YV+ L PE ++ +F KYG++T SL + TGK +GF FV F + AA A+E
Sbjct: 235 TNVYVKNLEPEVTNEEFRELFEKYGEITSASLSRDNETGKSRGFGFVNFVNHDSAAAAVE 294
>gi|50552081|ref|XP_503515.1| YALI0E03828p [Yarrowia lipolytica]
gi|74689524|sp|Q6C747.1|EIF3G_YARLI RecName: Full=Eukaryotic translation initiation factor 3 subunit G;
Short=eIF3g; AltName: Full=Eukaryotic translation
initiation factor 3 RNA-binding subunit; Short=eIF-3
RNA-binding subunit; AltName: Full=Translation
initiation factor eIF3 p33 subunit homolog; Short=eIF3
p33 homolog
gi|49649384|emb|CAG79094.1| YALI0E03828p [Yarrowia lipolytica CLIB122]
Length = 294
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 37/64 (57%)
Query: 193 DVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAA 252
D DE T+ V L EA D + +F KYG + V + K + TG+ +GFAFV ++ K A
Sbjct: 210 DDDELTLRVTNLSEEATDDDLRRMFGKYGMINRVYVAKDRDTGRPRGFAFVTYTLKSHAQ 269
Query: 253 KALE 256
ALE
Sbjct: 270 AALE 273
>gi|357631741|gb|EHJ79210.1| sex-lethal [Danaus plexippus]
Length = 333
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 37/63 (58%)
Query: 193 DVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAA 252
D+ E +YV LP D +E++F KYG++ + + KS G +G AFV F +EEA
Sbjct: 143 DIKETNLYVTNLPRAITEDQLETIFGKYGRIVQKHILRDKSNGTPRGVAFVRFDKREEAQ 202
Query: 253 KAL 255
+A+
Sbjct: 203 EAI 205
>gi|367045698|ref|XP_003653229.1| hypothetical protein THITE_2075584 [Thielavia terrestris NRRL 8126]
gi|347000491|gb|AEO66893.1| hypothetical protein THITE_2075584 [Thielavia terrestris NRRL 8126]
Length = 392
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 78/163 (47%), Gaps = 16/163 (9%)
Query: 112 QIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN-KLARLTHDPDDVVKALRKS 170
+I N +EFY SDSNL D+F + + + C+ K R VV ALR+S
Sbjct: 88 KIRNQVEFYFSDSNLPTDKFMWESTGGEENKPMPLKTICSFKRMRQFQPYSAVVAALRES 147
Query: 171 KLLEVT-EDGTK-VRRTVVVQDKPDVD----ECTIYVEKL---PPEAEHDYIESVFSKYG 221
LE++ E+G + VRR + +IY + P + D IE+ F+K+G
Sbjct: 148 TFLEISGEEGQEVVRRKKAYVSSTEAQRARMNASIYAKGFGDEEPSTQFD-IEAFFAKHG 206
Query: 222 KVTYVSLPKFKSTGK--LKGFAFVEFSTKEEAAKALELGLNPC 262
+V L K + T + KG FVEF+T EEA ++L P
Sbjct: 207 ---HVKLVKLRRTNEDLFKGSVFVEFATAEEADAFVKLDPKPT 246
>gi|226489562|emb|CAX75925.1| Enhancer of zeste homolog 1 (ENX-2) [Schistosoma japonicum]
Length = 376
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 76/156 (48%), Gaps = 9/156 (5%)
Query: 109 LYQQIMNLMEFYLSDSNLRKDRFFSQLL-QESPEIEVSVFLKCNKLARLTHDPDDVVKAL 167
L +I+ +E+Y D NL +D+F + + Q I + +K N+L L+ D + + K++
Sbjct: 7 LESKIIRQVEYYFGDVNLSRDKFMREAVKQNDGWISMETMIKFNRLKSLSEDAEFIKKSV 66
Query: 168 RKSK--LLEVTEDGTKVRRTVVVQDK-----PDVDECTIYVEKLPPEAEHDYIESVFSKY 220
KS+ L++V E+G + + V + + E ++YV+ + D I K+
Sbjct: 67 AKSQSGLVQVGENGLRRNPEMKVPETFESALENYKENSVYVKGFSSDENLDEIIEWLEKH 126
Query: 221 -GKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKAL 255
GK V + +F K +G F F KE++ K L
Sbjct: 127 GGKTIDVHMRRFPRDKKFRGSIFAIFEKKEDSEKFL 162
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLL-QESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--LL 57
+E+Y D NL +D+F + + Q I + +K N+L L+ D + + K++ KS+ L+
Sbjct: 15 VEYYFGDVNLSRDKFMREAVKQNDGWISMETMIKFNRLKSLSEDAEFIKKSVAKSQSGLV 74
Query: 58 EVTEDG 63
+V E+G
Sbjct: 75 QVGENG 80
>gi|440491451|gb|ELQ74095.1| putative Nucleotide-binding, alpha-beta plait, RNA recognition
motif domain protein, partial [Trachipleistophora
hominis]
Length = 394
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%)
Query: 190 DKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKE 249
DK D+ TI+V+ + +E F K GKV V +PK + T + KGF +VEFS +
Sbjct: 164 DKSQSDDATIFVKGFDKDVTELMVEEEFGKIGKVVNVRMPKDRDTSENKGFCYVEFSNAQ 223
Query: 250 EAAKAL 255
A KAL
Sbjct: 224 SAKKAL 229
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 199 IYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELG 258
++V+ LP A D I+ VF+KY V V LP + + +GF F+EF+T+++ K L
Sbjct: 254 LFVKNLPYTATVDDIKKVFAKYN-VKNVRLPTDEDEERNRGFCFIEFNTEQDMRKVLNNK 312
Query: 259 LN 260
N
Sbjct: 313 FN 314
>gi|226489560|emb|CAX75924.1| Enhancer of zeste homolog 1 (ENX-2) [Schistosoma japonicum]
Length = 288
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 76/156 (48%), Gaps = 9/156 (5%)
Query: 109 LYQQIMNLMEFYLSDSNLRKDRFFSQLL-QESPEIEVSVFLKCNKLARLTHDPDDVVKAL 167
L +I+ +E+Y D NL +D+F + + Q I + +K N+L L+ D + + K++
Sbjct: 7 LESKIIRQVEYYFGDVNLSRDKFMREAVKQNDGWISMETMIKFNRLKSLSEDAEFIKKSV 66
Query: 168 RKSK--LLEVTEDGTKVRRTVVVQDK-----PDVDECTIYVEKLPPEAEHDYIESVFSKY 220
KS+ L++V E+G + + V + + E ++YV+ + D I K+
Sbjct: 67 AKSQSGLVQVGENGLRRNPEMKVPETFESALENYKENSVYVKGFSSDENLDEIIEWLEKH 126
Query: 221 -GKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKAL 255
GK V + +F K +G F F KE++ K L
Sbjct: 127 GGKTIDVHMRRFPRDKKFRGSIFAIFEKKEDSEKFL 162
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLL-QESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--LL 57
+E+Y D NL +D+F + + Q I + +K N+L L+ D + + K++ KS+ L+
Sbjct: 15 VEYYFGDVNLSRDKFMREAVKQNDGWISMETMIKFNRLKSLSEDAEFIKKSVAKSQSGLV 74
Query: 58 EVTEDGTK 65
+V E+G +
Sbjct: 75 QVGENGLR 82
>gi|218437654|ref|YP_002375983.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7424]
gi|218170382|gb|ACK69115.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7424]
Length = 110
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 38/60 (63%)
Query: 197 CTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
+IYV +P + D I+ VF +YG V V LP + +G+++GFAFV+ T+++ A+E
Sbjct: 1 MSIYVGNIPYQVTQDDIKEVFGEYGTVKQVKLPVDRESGRVRGFAFVDLDTEDQENSAIE 60
>gi|13357168|gb|AAK20025.1|AF234183_1 sex-lethal protein SXL1 [Lucilia cuprina]
Length = 324
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 56/114 (49%), Gaps = 6/114 (5%)
Query: 159 DPDDVVKALRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFS 218
D + +K+L VT +++ + + + +YV LP D +E +F
Sbjct: 155 DAQNAIKSLNG-----VTVRNKRLKVSYARPGGESIKDTNLYVTNLPRTITDDELEKIFG 209
Query: 219 KYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNPCPPDYQSSILT 272
KYG + ++ + K TGK +G AFV F+ +EEA +A+ LN P+ S LT
Sbjct: 210 KYGNIVQKNILRDKLTGKPRGVAFVRFNKREEAQEAISA-LNNVIPEGASQPLT 262
>gi|301772788|ref|XP_002921814.1| PREDICTED: MKI67 FHA domain-interacting nucleolar
phosphoprotein-like [Ailuropoda melanoleuca]
Length = 297
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 183 RRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAF 242
RR Q+K + IYV LPP I + FS++G VT L + K TG KG+AF
Sbjct: 31 RRANQRQEKEKLTPGVIYVGHLPPALYETQIRAYFSQFGAVTRFRLSRSKRTGNSKGYAF 90
Query: 243 VEFSTKEEAAKALELGLN 260
VEF++ E+ AK + +N
Sbjct: 91 VEFAS-EDVAKIVADTMN 107
>gi|451995810|gb|EMD88278.1| hypothetical protein COCHEDRAFT_1197317 [Cochliobolus
heterostrophus C5]
Length = 282
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 38/62 (61%)
Query: 195 DECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKA 254
D T+ V + AE + +FS+YG VT V L K + TG+ KGFAFV ++ + +AAKA
Sbjct: 201 DSATLRVTNVSEFAEEQDLRDMFSRYGHVTRVFLAKDRETGRAKGFAFVSYADRSDAAKA 260
Query: 255 LE 256
E
Sbjct: 261 CE 262
>gi|357130252|ref|XP_003566764.1| PREDICTED: la-related protein 1-like isoform 2 [Brachypodium
distachyon]
Length = 954
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/77 (37%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Query: 108 QLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKAL 167
+L +I+ +E+Y SD+NL +D F L+ E + +S N+L R+T D +V AL
Sbjct: 326 ELRAKILAQVEYYFSDTNLERDGFLKSLMDEHGWVPISKVADFNRLKRITTDVHLIVDAL 385
Query: 168 RKSKLLEVTEDGTKVRR 184
S LL+V +D K+RR
Sbjct: 386 AGSSLLDVQDD--KIRR 400
Score = 47.8 bits (112), Expect = 0.006, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 39/69 (56%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEVT 60
+E+Y SD+NL +D F L+ E + +S N+L R+T D +V AL S LL+V
Sbjct: 335 VEYYFSDTNLERDGFLKSLMDEHGWVPISKVADFNRLKRITTDVHLIVDALAGSSLLDVQ 394
Query: 61 EDGTKVKGN 69
+D + + +
Sbjct: 395 DDKIRRRSD 403
>gi|226471474|emb|CAX70818.1| Enhancer of zeste homolog 1 (ENX-2) [Schistosoma japonicum]
gi|226471476|emb|CAX70819.1| Enhancer of zeste homolog 1 (ENX-2) [Schistosoma japonicum]
Length = 376
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 76/156 (48%), Gaps = 9/156 (5%)
Query: 109 LYQQIMNLMEFYLSDSNLRKDRFFSQLL-QESPEIEVSVFLKCNKLARLTHDPDDVVKAL 167
L +I+ +E+Y D NL +D+F + + Q I + +K N+L L+ D + + K++
Sbjct: 7 LESKIIRQVEYYFGDVNLSRDKFMREAVKQNDGWISMETMIKFNRLKSLSEDAEFIKKSV 66
Query: 168 RKSK--LLEVTEDGTKVRRTVVVQDK-----PDVDECTIYVEKLPPEAEHDYIESVFSKY 220
KS+ L++V E+G + + V + + E ++YV+ + D I K+
Sbjct: 67 AKSQSGLVQVGENGLRRNPEMKVPETFESALENYKENSVYVKGFSSDENLDEIIEWLEKH 126
Query: 221 -GKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKAL 255
GK V + +F K +G F F KE++ K L
Sbjct: 127 GGKTIDVHMRRFPRDKKFRGSIFAIFEKKEDSEKFL 162
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLL-QESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--LL 57
+E+Y D NL +D+F + + Q I + +K N+L L+ D + + K++ KS+ L+
Sbjct: 15 VEYYFGDVNLSRDKFMREAVKQNDGWISMETMIKFNRLKSLSEDAEFIKKSVAKSQSGLV 74
Query: 58 EVTEDG 63
+V E+G
Sbjct: 75 QVGENG 80
>gi|357130250|ref|XP_003566763.1| PREDICTED: la-related protein 1-like isoform 1 [Brachypodium
distachyon]
Length = 960
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/77 (37%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Query: 108 QLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKAL 167
+L +I+ +E+Y SD+NL +D F L+ E + +S N+L R+T D +V AL
Sbjct: 326 ELRAKILAQVEYYFSDTNLERDGFLKSLMDEHGWVPISKVADFNRLKRITTDVHLIVDAL 385
Query: 168 RKSKLLEVTEDGTKVRR 184
S LL+V +D K+RR
Sbjct: 386 AGSSLLDVQDD--KIRR 400
Score = 47.8 bits (112), Expect = 0.006, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 39/69 (56%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEVT 60
+E+Y SD+NL +D F L+ E + +S N+L R+T D +V AL S LL+V
Sbjct: 335 VEYYFSDTNLERDGFLKSLMDEHGWVPISKVADFNRLKRITTDVHLIVDALAGSSLLDVQ 394
Query: 61 EDGTKVKGN 69
+D + + +
Sbjct: 395 DDKIRRRSD 403
>gi|354566485|ref|ZP_08985657.1| RNP-1 like RNA-binding protein [Fischerella sp. JSC-11]
gi|353545501|gb|EHC14952.1| RNP-1 like RNA-binding protein [Fischerella sp. JSC-11]
Length = 99
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 35/59 (59%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
++YV L E D + +VF++YG V V LP + TG ++GF FVE ST E A+E
Sbjct: 2 SVYVGNLSYEVTEDSLNAVFAEYGSVKRVQLPTDRETGHVRGFGFVEMSTDAEETAAIE 60
>gi|2565362|gb|AAB81985.1| Sex-lethal protein [Musca domestica]
Length = 318
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 53/102 (51%), Gaps = 6/102 (5%)
Query: 176 TEDGTKVR--RTVVVQDKP---DVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPK 230
T +G VR R V +P + + +YV LP D +E +F KYG + ++ +
Sbjct: 155 TVNGITVRNKRLKVSYARPGGESIKDTNLYVTNLPRTITDDELEKIFGKYGNIVQKNILR 214
Query: 231 FKSTGKLKGFAFVEFSTKEEAAKALELGLNPCPPDYQSSILT 272
K TG+ +G AFV F+ +EEA +A+ LN P+ S LT
Sbjct: 215 DKLTGRPRGVAFVRFNKREEAQEAIS-ALNNVIPEGASQPLT 255
>gi|6226775|sp|O97018.2|SXL_CHRRU RecName: Full=Sex-lethal homolog
gi|25291016|gb|AAN74807.1| sex-lethal [Chrysomya rufifacies]
Length = 307
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 56/114 (49%), Gaps = 6/114 (5%)
Query: 159 DPDDVVKALRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFS 218
D + +K+L VT +++ + + + +YV LP D +E +F
Sbjct: 138 DAQNAIKSLNG-----VTVRNKRLKVSYARPGGESIKDTNLYVTNLPRTITDDELEKIFG 192
Query: 219 KYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNPCPPDYQSSILT 272
KYG + ++ + K TGK +G AFV F+ +EEA +A+ LN P+ S LT
Sbjct: 193 KYGNIVQKNILRDKLTGKPRGVAFVRFNKREEAQEAISA-LNNVIPEGASQPLT 245
>gi|226287551|gb|EEH43064.1| polyadenylate-binding protein [Paracoccidioides brasiliensis Pb18]
Length = 761
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 35/60 (58%)
Query: 197 CTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
+YV+ L PE ++ +F KYG++T SL + TGK +GF FV F + AA A+E
Sbjct: 235 TNVYVKNLEPEVTNEEFRELFEKYGEITSASLSRDNETGKSRGFGFVNFVNHDSAAAAVE 294
>gi|330937139|ref|XP_003305556.1| hypothetical protein PTT_18431 [Pyrenophora teres f. teres 0-1]
gi|311317390|gb|EFQ86366.1| hypothetical protein PTT_18431 [Pyrenophora teres f. teres 0-1]
Length = 283
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 38/62 (61%)
Query: 195 DECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKA 254
D T+ V + AE + +FS+YG VT V L K + TG+ KGFAFV ++ + +AAKA
Sbjct: 202 DSATLRVTNVSEFAEEQDLRDMFSRYGHVTRVFLAKDRETGRAKGFAFVSYADRSDAAKA 261
Query: 255 LE 256
E
Sbjct: 262 CE 263
>gi|189210555|ref|XP_001941609.1| translation initiation factor eIF3g [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187977702|gb|EDU44328.1| translation initiation factor eIF3g [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 283
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 38/62 (61%)
Query: 195 DECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKA 254
D T+ V + AE + +FS+YG VT V L K + TG+ KGFAFV ++ + +AAKA
Sbjct: 202 DSATLRVTNVSEFAEEQDLRDMFSRYGHVTRVFLAKDRETGRAKGFAFVSYADRSDAAKA 261
Query: 255 LE 256
E
Sbjct: 262 CE 263
>gi|2981305|gb|AAC38968.1| sex-lethal homolog CcSXL [Ceratitis capitata]
Length = 340
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 6/100 (6%)
Query: 178 DGTKVR--RTVVVQDKP---DVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFK 232
+G VR R V +P + + +YV LP D ++++F KYG + ++ + K
Sbjct: 164 NGITVRNKRLKVSYARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGMIVQKNILRDK 223
Query: 233 STGKLKGFAFVEFSTKEEAAKALELGLNPCPPDYQSSILT 272
TGK +G AFV F+ +EEA +A+ LN P+ S LT
Sbjct: 224 LTGKPRGVAFVRFNKREEAQEAIS-ALNNVIPEGASQPLT 262
>gi|145536073|ref|XP_001453764.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124421497|emb|CAK86367.1| unnamed protein product [Paramecium tetraurelia]
Length = 351
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 111 QQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALR 168
++I +E+YLSD NL +D FF + + +S + +++ LKCNK+ ++ + +V+A++
Sbjct: 4 EEIKRQVEYYLSDKNLSQDEFFHKQISQSQDGYLQLQFILKCNKVKQMKVTQEQLVEAIK 63
Query: 169 KSKLLEVTEDGTKVRRT 185
S +E+ D T VRR+
Sbjct: 64 TSTEVELGPDQTSVRRS 80
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 44/69 (63%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
+E+YLSD NL +D FF + + +S + +++ LKCNK+ ++ + +V+A++ S +E
Sbjct: 10 VEYYLSDKNLSQDEFFHKQISQSQDGYLQLQFILKCNKVKQMKVTQEQLVEAIKTSTEVE 69
Query: 59 VTEDGTKVK 67
+ D T V+
Sbjct: 70 LGPDQTSVR 78
>gi|67465872|ref|XP_649094.1| RNA-binding protein TIA-1 [Entamoeba histolytica HM-1:IMSS]
gi|56465456|gb|EAL43711.1| RNA-binding protein TIA-1, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449705857|gb|EMD45818.1| RNA-binding protein TIA-1, putative [Entamoeba histolytica KU27]
Length = 306
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 35/59 (59%)
Query: 199 IYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALEL 257
I+V L PE D + F K+G+VT + KF TGK KG+ FV F KE+A A+++
Sbjct: 131 IFVGGLQPEVNDDLLYKTFQKFGRVTDARVLKFTQTGKSKGYGFVTFIRKEDAETAMQM 189
Score = 43.9 bits (102), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 36/68 (52%), Gaps = 6/68 (8%)
Query: 188 VQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFST 247
+ ++ CT+Y+ +P E D ++ + ++YG + V L K KG+AF++FS
Sbjct: 223 INNETSSQNCTVYIGNIPKNVESDDLKQLLAEYGSIEEVRL------NKDKGYAFIKFSK 276
Query: 248 KEEAAKAL 255
E A A+
Sbjct: 277 HESATSAI 284
>gi|427719544|ref|YP_007067538.1| RNP-1 like RNA-binding protein [Calothrix sp. PCC 7507]
gi|427351980|gb|AFY34704.1| RNP-1 like RNA-binding protein [Calothrix sp. PCC 7507]
Length = 101
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%)
Query: 197 CTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
+IYV L + + ++ VFS+YG V V LP + TG+++GF FVE T+ E KA+E
Sbjct: 1 MSIYVGNLSYQVREEDLKQVFSEYGTVKTVQLPVDRETGRVRGFGFVEMETEAEETKAIE 60
>gi|326497549|dbj|BAK05864.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 483
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 72/167 (43%), Gaps = 20/167 (11%)
Query: 109 LYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKA 166
+ +I +E+Y SD NL + + + PE + +SV K+ L + A
Sbjct: 124 VLHKITKQVEYYFSDINLATTEHLMRFITKDPEGYVPMSVVASFKKIKALVQSSSMLASA 183
Query: 167 LRKSKLLEVTEDGTKVRR--TVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVT 224
LR S L V+EDG +V+R D ++ + E LP + + + +FS G V
Sbjct: 184 LRTSSKLVVSEDGNRVKRGQPFTESDLEELQSRIVVAENLPDDHCYQNLMKIFSSAGSVK 243
Query: 225 YV----------SLPKFKSTGKL------KGFAFVEFSTKEEAAKAL 255
+ S P + KL K AFVE+ T E+A KA+
Sbjct: 244 TIRTCYPQTPNGSGPVTNRSAKLDMLFANKLHAFVEYETVEDAEKAI 290
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
+E+Y SD NL + + + PE + +SV K+ L + ALR S L
Sbjct: 132 VEYYFSDINLATTEHLMRFITKDPEGYVPMSVVASFKKIKALVQSSSMLASALRTSSKLV 191
Query: 59 VTEDGTKVK 67
V+EDG +VK
Sbjct: 192 VSEDGNRVK 200
>gi|443315198|ref|ZP_21044702.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
6406]
gi|442785209|gb|ELR95045.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
6406]
Length = 103
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 38/60 (63%)
Query: 197 CTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
+IYV L + + +E VF +YG+V+ VSLP + TG+ +GFAFV+ + E KA+E
Sbjct: 1 MSIYVGNLSYDVTREDLEQVFKEYGEVSRVSLPTDRETGRPRGFAFVDMQAEAEEDKAIE 60
>gi|194748797|ref|XP_001956829.1| GF10124 [Drosophila ananassae]
gi|190624111|gb|EDV39635.1| GF10124 [Drosophila ananassae]
Length = 1527
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 36/149 (24%), Positives = 67/149 (44%), Gaps = 13/149 (8%)
Query: 108 QLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKAL 167
+L Q + +E+Y S NL D + + + + K N + +LT D + + + L
Sbjct: 283 KLKQMLATQLEYYFSRENLANDSYLLSQMDHDQYVPIWTVAKFNLVKKLTKDLNLITEVL 342
Query: 168 RKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVS 227
R+S ++V E G +VR P+ C I + ++ P D ++++FS +S
Sbjct: 343 RESPNVQVDEKGLRVR--------PNRKRCIIILREISPNTPPDDVKALFSNESCPRPIS 394
Query: 228 LPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
+F +V F + E+A KA +
Sbjct: 395 C-EFAGNNSW----YVTFESDEDAQKAFQ 418
Score = 38.9 bits (89), Expect = 2.6, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 2/88 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEVT 60
+E+Y S NL D + + + + K N + +LT D + + + LR+S ++V
Sbjct: 292 LEYYFSRENLANDSYLLSQMDHDQYVPIWTVAKFNLVKKLTKDLNLITEVLRESPNVQVD 351
Query: 61 EDGTKVKGNIIRHFLV--PISMETEASD 86
E G +V+ N R ++ IS T D
Sbjct: 352 EKGLRVRPNRKRCIIILREISPNTPPDD 379
>gi|451851414|gb|EMD64712.1| hypothetical protein COCSADRAFT_25710 [Cochliobolus sativus ND90Pr]
Length = 282
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 38/62 (61%)
Query: 195 DECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKA 254
D T+ V + AE + +FS+YG VT V L K + TG+ KGFAFV ++ + +AAKA
Sbjct: 201 DSATLRVTNVSEFAEEQDLRDMFSRYGHVTRVFLAKDRETGRAKGFAFVSYADRSDAAKA 260
Query: 255 LE 256
E
Sbjct: 261 CE 262
>gi|313227329|emb|CBY22475.1| unnamed protein product [Oikopleura dioica]
Length = 467
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 86/165 (52%), Gaps = 21/165 (12%)
Query: 111 QQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN--KLARLTHDPDDVVKALR 168
+ I++ +E+YLSD L KD++ + ++ E +S+ L + K+ +LT D V AL+
Sbjct: 190 EAIIDQVEYYLSDDYLAKDKYLLRQIRCKSEGYISIKLMTSFKKVKKLTRDWRVVRHALK 249
Query: 169 KSKLLEVTEDGTKVRRTVVVQD---KPDVDECTIYVEKLPPEAEH-DYIESVFSKYGKVT 224
+ LEV+ +G +V+R ++ + KP + + + ++PPE + D I ++F +YG +
Sbjct: 250 LAPQLEVSPEGYRVKRRDILPETLRKPRLLTSVVAI-RVPPEFDSVDQITTMFREYGDIG 308
Query: 225 YVSL--PKFKSTGKLKGF------------AFVEFSTKEEAAKAL 255
V L P + L+ + A V+F + E A KA+
Sbjct: 309 LVRLLRPGKEVPSDLRNYATQVPDIGDSLCAVVDFESSEAALKAV 353
>gi|88808896|ref|ZP_01124405.1| RNA-binding protein RbpD [Synechococcus sp. WH 7805]
gi|88786838|gb|EAR17996.1| RNA-binding protein RbpD [Synechococcus sp. WH 7805]
Length = 115
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 39/60 (65%)
Query: 197 CTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
TIY+ L +AE + + +FS+YG+V SLP + TG+ +GF FVE ++ ++ KA++
Sbjct: 1 MTIYIGNLSFQAEQEDLLDLFSQYGEVKSASLPLDRETGRKRGFGFVEMNSDQDEQKAID 60
>gi|169618950|ref|XP_001802888.1| hypothetical protein SNOG_12667 [Phaeosphaeria nodorum SN15]
gi|224488071|sp|Q0U6E7.2|EIF3G_PHANO RecName: Full=Eukaryotic translation initiation factor 3 subunit G;
Short=eIF3g; AltName: Full=Eukaryotic translation
initiation factor 3 RNA-binding subunit; Short=eIF-3
RNA-binding subunit; AltName: Full=Translation
initiation factor eIF3 p33 subunit homolog; Short=eIF3
p33 homolog
gi|160703713|gb|EAT79965.2| hypothetical protein SNOG_12667 [Phaeosphaeria nodorum SN15]
Length = 281
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 38/62 (61%)
Query: 195 DECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKA 254
D T+ V + AE + +FS+YG VT V L K + TG+ KGFAFV ++ + +AAKA
Sbjct: 200 DSATLRVTNVSEFAEEQDLRDMFSRYGHVTRVFLAKDRETGRAKGFAFVSYADRTDAAKA 259
Query: 255 LE 256
E
Sbjct: 260 CE 261
>gi|396082112|gb|AFN83724.1| small RNA-binding pol III transcript stabilizing-like protein
[Encephalitozoon romaleae SJ-2008]
Length = 296
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 77/151 (50%), Gaps = 9/151 (5%)
Query: 111 QQIMNLMEFYLSDSNLRKDRFF-SQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRK 169
++I + +EFY SD+N R D+F Q L I + + N+L L +DV +AL+
Sbjct: 7 EKIRSQVEFYFSDANFRVDKFLREQSLVNDGYIPIKTIVSFNRLRSLEATVEDVKEALKD 66
Query: 170 SKLLEVTEDGTKVRRT----VVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTY 225
SK++EV ++ K T V +K D+ + IY++ P + + ++ S + +T
Sbjct: 67 SKVVEVKDEMVKKIETEEYLSYVMEK-DISKRVIYIDGFPKDMMLEDVKDTLSPF--ITP 123
Query: 226 VSLPKFKSTGK-LKGFAFVEFSTKEEAAKAL 255
V + + GK G F E ++EEA KAL
Sbjct: 124 VLIRMRRDKGKNFSGSIFAEMKSEEEAQKAL 154
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 1 MEFYLSDSNLRKDRFF-SQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEV 59
+EFY SD+N R D+F Q L I + + N+L L +DV +AL+ SK++EV
Sbjct: 13 VEFYFSDANFRVDKFLREQSLVNDGYIPIKTIVSFNRLRSLEATVEDVKEALKDSKVVEV 72
Query: 60 TEDGTK 65
++ K
Sbjct: 73 KDEMVK 78
>gi|242775157|ref|XP_002478587.1| RNA-binding La domain protein [Talaromyces stipitatus ATCC 10500]
gi|218722206|gb|EED21624.1| RNA-binding La domain protein [Talaromyces stipitatus ATCC 10500]
Length = 396
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 89/190 (46%), Gaps = 27/190 (14%)
Query: 110 YQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDP-DDVVKA 166
+ +I +EFY SDSNL D F + + S +E+S+ ++ R P +V+A
Sbjct: 102 HNEIRKQVEFYFSDSNLPMDNFLLKKVGGSANHPVELSLLHSFKRMRRFQ--PFSAIVEA 159
Query: 167 LRKSKLLEVTEDGTKVRRTVVVQDK------PDVDEC--------TIYVEKLPPEAEHDY 212
L+ S +L + ++ TKV+R V + + P+V + ++YV+ E
Sbjct: 160 LKTSTVLNLVDNDTKVKRKVPLPESVNDFLDPNVVKVFETEAMGRSVYVKGFGEEGPKTQ 219
Query: 213 --IESVFSKYGKVTYVSLPK-FKSTGKLKGFAFVEFSTKEEAAKALELGLNPCPPDYQSS 269
IE+ F+ YG + L + F T KG FVEF T+E K L L+P PP +
Sbjct: 220 FEIEAFFAPYGPTNAIRLRRAFDKT--FKGSVFVEFDTEETQKKF--LALDP-PPKWNGK 274
Query: 270 ILTTTSRLSF 279
L S+ +
Sbjct: 275 DLIIKSKKDY 284
>gi|327405345|ref|YP_004346183.1| RNP-1 like RNA-binding protein [Fluviicola taffensis DSM 16823]
gi|327320853|gb|AEA45345.1| RNP-1 like RNA-binding protein [Fluviicola taffensis DSM 16823]
Length = 224
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 39/61 (63%)
Query: 197 CTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
+I+V KL + ++S+F YGKV V++ K + TGK +GFAFVE + + EA KA+E
Sbjct: 2 TSIFVAKLDFNTTEEQLKSLFEDYGKVNRVTIAKDRETGKPRGFAFVEMADESEADKAIE 61
Query: 257 L 257
Sbjct: 62 A 62
>gi|406700097|gb|EKD03282.1| hypothetical protein A1Q2_02392 [Trichosporon asahii var. asahii
CBS 8904]
Length = 387
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 57/141 (40%), Gaps = 28/141 (19%)
Query: 144 VSVFLKCNKL--ARLTHDPD-------------DVVKALRKSKLLEVTEDGTKVRRTVVV 188
S F C ++ AR+ D D DV A++ + DG VR
Sbjct: 221 ASEFASCGEVVSARIVLDRDTQRSRGFGYVEFADVDSAIKAIEFEGKELDGRAVRVNFAN 280
Query: 189 QDKPDVDEC-------------TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTG 235
KPD D+ T+++ LP + D+I F +YG V V LP + TG
Sbjct: 281 ARKPDADKRAKVFNDKRSPPADTLWIGSLPFDTTEDHIYETFGEYGDVQSVRLPTDRETG 340
Query: 236 KLKGFAFVEFSTKEEAAKALE 256
KGF +V F +A ALE
Sbjct: 341 AAKGFGYVTFGDVAQATAALE 361
Score = 37.0 bits (84), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 34/60 (56%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALEL 257
T++V L ++D++ S F+ G+V + + T + +GF +VEF+ + A KA+E
Sbjct: 205 TVFVGGLSWNIDNDWLASEFASCGEVVSARIVLDRDTQRSRGFGYVEFADVDSAIKAIEF 264
>gi|282896133|ref|ZP_06304159.1| RNA-binding region protein RNP-1 [Raphidiopsis brookii D9]
gi|281199051|gb|EFA73926.1| RNA-binding region protein RNP-1 [Raphidiopsis brookii D9]
Length = 98
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 39/59 (66%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
++YV L E D + +VFS+YG+V V +P + TG+++GFAFVE +++ + A+E
Sbjct: 2 SVYVGNLSYEVTQDALTAVFSEYGEVKRVQIPTDRETGRVRGFAFVEMNSEAQETAAIE 60
>gi|440684571|ref|YP_007159366.1| putative transcriptional regulator [Anabaena cylindrica PCC 7122]
gi|428681690|gb|AFZ60456.1| putative transcriptional regulator [Anabaena cylindrica PCC 7122]
Length = 604
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 195 DECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKA 254
D I++ + A+ +E++FS++G+++ V LPK + TGK +GFA VEF E A KA
Sbjct: 523 DYAKIFIGNVDFNADEQDLETLFSQFGEISDVYLPKDRMTGKSRGFAIVEFEQLESAKKA 582
Query: 255 LELGLNPC 262
LE NP
Sbjct: 583 LE-NTNPL 589
>gi|427720688|ref|YP_007068682.1| RNP-1 like RNA-binding protein [Calothrix sp. PCC 7507]
gi|427353124|gb|AFY35848.1| RNP-1 like RNA-binding protein [Calothrix sp. PCC 7507]
Length = 99
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 34/59 (57%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
+IYV L E D + VF++YG V V LP + TG+++GF FVE T E A+E
Sbjct: 2 SIYVGNLSYEVTQDGLSGVFAEYGSVKRVQLPTDRDTGRVRGFGFVEMGTDAEETAAIE 60
>gi|33863352|ref|NP_894912.1| RNA-binding protein RbpD [Prochlorococcus marinus str. MIT 9313]
gi|33640801|emb|CAE21256.1| RNA-binding protein RbpD [Prochlorococcus marinus str. MIT 9313]
Length = 111
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 38/59 (64%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
TIY+ L +AE + + +FS+YG+V SLP + TG+ +GFAFVE + + KA++
Sbjct: 2 TIYIGNLSFQAEQEDLLDLFSQYGEVKTCSLPLDRETGRKRGFAFVEMTNDADEQKAID 60
>gi|453231816|ref|NP_001263666.1| Protein EIF-3.G, isoform a [Caenorhabditis elegans]
gi|413001245|emb|CCO25605.1| Protein EIF-3.G, isoform a [Caenorhabditis elegans]
Length = 262
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 39/66 (59%)
Query: 190 DKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKE 249
D+ DE T V LP E D + +F K G+V + + + K TG KGFAFV F +++
Sbjct: 175 DRNRSDENTCRVTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRD 234
Query: 250 EAAKAL 255
+AA+A+
Sbjct: 235 DAARAI 240
>gi|396458891|ref|XP_003834058.1| similar to eukaryotic translation initiation factor 3 subunit G
[Leptosphaeria maculans JN3]
gi|312210607|emb|CBX90693.1| similar to eukaryotic translation initiation factor 3 subunit G
[Leptosphaeria maculans JN3]
Length = 282
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 38/62 (61%)
Query: 195 DECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKA 254
D T+ V + AE + +FS+YG VT V L K + TG+ KGFAFV ++ + +AAKA
Sbjct: 201 DSATLRVTNVSEFAEEQDLRDMFSRYGHVTRVFLAKDRETGRAKGFAFVSYADRTDAAKA 260
Query: 255 LE 256
E
Sbjct: 261 CE 262
>gi|406859894|gb|EKD12956.1| RNA recognition domain-containing protein [Marssonina brunnea f.
sp. 'multigermtubi' MB_m1]
Length = 1039
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/59 (50%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 199 IYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALEL 257
I+V + P D +E +FSKYGKV V+L K +G+ KG AFV F+TKE AA AL+L
Sbjct: 746 IHVTSIDPSITPDELEKLFSKYGKVERVNLLT-KVSGESKGAAFVSFATKEGAAAALDL 803
Score = 39.3 bits (90), Expect = 2.2, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALEL 257
T+YV PP A+ +Y+ +F + G++ + P K + F ++ F T + AA A +L
Sbjct: 654 TLYVTNYPPTADENYLRKLFKECGEIFSIRWPSLKVNSHRR-FCYISFRTVDAAAAATKL 712
>gi|167391953|ref|XP_001739964.1| nucleolysin TIAR [Entamoeba dispar SAW760]
gi|165896141|gb|EDR23641.1| nucleolysin TIAR, putative [Entamoeba dispar SAW760]
Length = 306
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 35/59 (59%)
Query: 199 IYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALEL 257
I+V L PE D + F K+G+VT + KF TGK KG+ FV F KE+A A+++
Sbjct: 131 IFVGGLQPEVNDDLLYKTFQKFGRVTDARVLKFTQTGKSKGYGFVTFIRKEDAETAMQM 189
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 188 VQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFST 247
+ ++ + CT+Y+ +P E D ++ + ++YG + V L K KG+AF++FS
Sbjct: 223 INNETSIQNCTVYIGNIPKNVESDDLKQLLAEYGSIEEVRL------NKDKGYAFIKFSK 276
Query: 248 KEEAAKAL 255
E A A+
Sbjct: 277 HESATSAI 284
>gi|124022676|ref|YP_001016983.1| RNA-binding protein RbpD [Prochlorococcus marinus str. MIT 9303]
gi|123962962|gb|ABM77718.1| RNA-binding protein RbpD [Prochlorococcus marinus str. MIT 9303]
Length = 104
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 38/59 (64%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
TIY+ L +AE + + +FS+YG+V SLP + TG+ +GFAFVE + + KA++
Sbjct: 2 TIYIGNLSFQAEQEDLLDLFSQYGEVKTCSLPLDRETGRKRGFAFVEMANDADEQKAID 60
>gi|168693499|ref|NP_001108266.1| uncharacterized protein LOC100137645 [Xenopus laevis]
gi|163916330|gb|AAI57447.1| LOC100137645 protein [Xenopus laevis]
Length = 478
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 83/189 (43%), Gaps = 52/189 (27%)
Query: 108 QLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN--KLARLTHDPDDVVK 165
+L ++I++ +EFYLSD NL D F + +Q++ VS+ L + K+ LT D +
Sbjct: 78 KLVRKIVSQVEFYLSDENLSHDAFLLKHVQKNKMGYVSIKLLTSFKKIKYLTRDWRKTLY 137
Query: 166 ALRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAE---------------- 209
ALR S+ LEV E+ TKVRR + D Y+ LPP +
Sbjct: 138 ALRFSEQLEVNEEETKVRRKNPLPD---------YLLGLPPTKQLLAWNILDPEKGSFSC 188
Query: 210 -----HDYIESVFSKYGKVTYVSLPKFKSTGK-----------------LKGFAFVEFST 247
+ + S F+ YG + + + K +GK K A VE+ +
Sbjct: 189 QQKNLMEIVTSFFATYGVIMSIRILK---SGKEVPSDIKKYMLRYPELSTKNCALVEYES 245
Query: 248 KEEAAKALE 256
E A KALE
Sbjct: 246 LEGARKALE 254
Score = 41.6 bits (96), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN--KLARLTHDPDDVVKALRKSKLLE 58
+EFYLSD NL D F + +Q++ VS+ L + K+ LT D + ALR S+ LE
Sbjct: 87 VEFYLSDENLSHDAFLLKHVQKNKMGYVSIKLLTSFKKIKYLTRDWRKTLYALRFSEQLE 146
Query: 59 VTEDGTKVK 67
V E+ TKV+
Sbjct: 147 VNEEETKVR 155
>gi|116073022|ref|ZP_01470284.1| RNA-binding protein RbpD [Synechococcus sp. RS9916]
gi|116068327|gb|EAU74079.1| RNA-binding protein RbpD [Synechococcus sp. RS9916]
Length = 107
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 38/60 (63%)
Query: 197 CTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
TIY+ L +AE + + +FS+YG+V SLP + TG+ +GF FVE S+ + KA++
Sbjct: 1 MTIYIGNLSFQAEQEDLLDLFSQYGEVKSASLPLDRETGRKRGFGFVEMSSDADEQKAID 60
>gi|427731365|ref|YP_007077602.1| RRM domain-containing RNA-binding protein [Nostoc sp. PCC 7524]
gi|427367284|gb|AFY50005.1| RRM domain-containing RNA-binding protein [Nostoc sp. PCC 7524]
Length = 100
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 36/59 (61%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
++YV L + D + +VF++YG V V LP + TG+++GF FVE S+ E A+E
Sbjct: 2 SVYVGNLSYDVTEDSLNAVFAEYGSVKRVQLPTDRETGRVRGFGFVEMSSDAEETAAIE 60
>gi|17533393|ref|NP_495778.1| Protein EIF-3.G, isoform b [Caenorhabditis elegans]
gi|3024026|sp|Q19706.1|EIF3G_CAEEL RecName: Full=Eukaryotic translation initiation factor 3 subunit G;
Short=eIF3g; AltName: Full=Eukaryotic translation
initiation factor 3 RNA-binding subunit; Short=eIF-3
RNA-binding subunit; AltName: Full=Eukaryotic
translation initiation factor 3 subunit 4
gi|3876226|emb|CAA90354.1| Protein EIF-3.G, isoform b [Caenorhabditis elegans]
Length = 256
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 39/66 (59%)
Query: 190 DKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKE 249
D+ DE T V LP E D + +F K G+V + + + K TG KGFAFV F +++
Sbjct: 169 DRNRSDENTCRVTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRD 228
Query: 250 EAAKAL 255
+AA+A+
Sbjct: 229 DAARAI 234
>gi|411118097|ref|ZP_11390478.1| RRM domain-containing RNA-binding protein [Oscillatoriales
cyanobacterium JSC-12]
gi|410711821|gb|EKQ69327.1| RRM domain-containing RNA-binding protein [Oscillatoriales
cyanobacterium JSC-12]
Length = 100
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 34/59 (57%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
+IYV L D + F++YG V V LP + TG+L+GFAFVE T E KA+E
Sbjct: 2 SIYVGNLSYNVTSDDLTQTFAEYGTVKRVQLPTDRETGRLRGFAFVEMETDAEEDKAIE 60
>gi|327294687|ref|XP_003232039.1| RNA-binding La domain-containing protein [Trichophyton rubrum CBS
118892]
gi|326465984|gb|EGD91437.1| RNA-binding La domain-containing protein [Trichophyton rubrum CBS
118892]
Length = 420
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 88/197 (44%), Gaps = 33/197 (16%)
Query: 86 DNVDKDLSDLQRKDGGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLL--QESPEIE 143
DN+ D S L+ D RK+ +EFY SDSNL D+F + E+ +E
Sbjct: 96 DNIKSDPSSLEETDDPVEIRKQ---------VEFYFSDSNLPMDKFLLSKVGGSENRPVE 146
Query: 144 VSVFLKCNKLARLTHDP-DDVVKALRKSKLLEVTEDGTKVRRTVVVQD--KPDVDEC--- 197
+++ ++ R P +V+AL+ S+L+E+ +D VRR V + D K D
Sbjct: 147 LALLHSFKRMRRFQ--PFSAIVEALKSSELVELVDDDKAVRRKVPLPDTIKETADSSAVK 204
Query: 198 ---------TIYVEKLPPEAEHDY--IESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFS 246
+IY + PE IE+ F+ YG V L + KG FVEF
Sbjct: 205 IFEDKAMHRSIYAKGFGPEEPSTQFDIEAFFTPYGPTNAVRLRRAMDKT-FKGSVFVEFE 263
Query: 247 TKEEAAKALELGLNPCP 263
T E+ KA L + P P
Sbjct: 264 T-EDLQKAF-LAVEPKP 278
>gi|308509216|ref|XP_003116791.1| CRE-EIF-3.G protein [Caenorhabditis remanei]
gi|308241705|gb|EFO85657.1| CRE-EIF-3.G protein [Caenorhabditis remanei]
Length = 260
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 37/61 (60%)
Query: 195 DECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKA 254
DE T V LP E D + VF + G+V + + + K TG KGFAFV F ++++AA+A
Sbjct: 178 DENTCRVTNLPQEMNEDELRDVFGRIGRVIRIFIARDKITGLPKGFAFVTFESRDDAARA 237
Query: 255 L 255
+
Sbjct: 238 I 238
>gi|149569361|ref|XP_001519469.1| PREDICTED: hypothetical protein LOC100090300, partial
[Ornithorhynchus anatinus]
Length = 371
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 53/85 (62%), Gaps = 2/85 (2%)
Query: 108 QLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN--KLARLTHDPDDVVK 165
+L ++I+ +EFYLSD NL +D F + +Q++ + VS+ L + K+ L+ D +
Sbjct: 20 ELVRKIVAQVEFYLSDENLARDTFLLKHVQKNKQGFVSIKLLTSFKKVKYLSQDWRLTLH 79
Query: 166 ALRKSKLLEVTEDGTKVRRTVVVQD 190
ALR S+LLEV +GTKVRR + D
Sbjct: 80 ALRFSELLEVNVEGTKVRRKSPLPD 104
Score = 44.7 bits (104), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 44/69 (63%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN--KLARLTHDPDDVVKALRKSKLLE 58
+EFYLSD NL +D F + +Q++ + VS+ L + K+ L+ D + ALR S+LLE
Sbjct: 29 VEFYLSDENLARDTFLLKHVQKNKQGFVSIKLLTSFKKVKYLSQDWRLTLHALRFSELLE 88
Query: 59 VTEDGTKVK 67
V +GTKV+
Sbjct: 89 VNVEGTKVR 97
>gi|6226164|sp|O61374.2|SXL_CERCA RecName: Full=Sex-lethal homolog; AltName: Full=CCSXL
Length = 348
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 6/100 (6%)
Query: 178 DGTKVR--RTVVVQDKP---DVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFK 232
+G VR R V +P + + +YV LP D ++++F KYG + ++ + K
Sbjct: 172 NGITVRNKRLKVSYARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGMIVQKNILRDK 231
Query: 233 STGKLKGFAFVEFSTKEEAAKALELGLNPCPPDYQSSILT 272
TGK +G AFV F+ +EEA +A+ LN P+ S LT
Sbjct: 232 LTGKPRGVAFVRFNKREEAQEAIS-ALNNVIPEGASQPLT 270
>gi|403376943|gb|EJY88462.1| hypothetical protein OXYTRI_16474 [Oxytricha trifallax]
Length = 753
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 63/119 (52%), Gaps = 8/119 (6%)
Query: 76 VPISMETEASDNVDKDLSDLQRKDGGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQL 135
P +T+++DN + + K +++++ L I ME+Y D N KD++ +
Sbjct: 638 APSQEQTQSTDNQNGQPPQNKAKQDFLKNQQENLDSGIRRQMEYYFGDKNYHKDKYIQKK 697
Query: 136 LQES-----PEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEVTEDGTKVRRTVVVQ 189
+ E+ P E+ F N++ +LT++ + VV+AL SK++E +ED VRR V Q
Sbjct: 698 VSENEGKYVPLKEIMSF---NQMRKLTNNVEQVVRALEGSKIVEFSEDQKMVRRKQVKQ 753
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 44/78 (56%), Gaps = 8/78 (10%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQES-----PEIEVSVFLKCNKLARLTHDPDDVVKALRKSK 55
ME+Y D N KD++ + + E+ P E+ F N++ +LT++ + VV+AL SK
Sbjct: 679 MEYYFGDKNYHKDKYIQKKVSENEGKYVPLKEIMSF---NQMRKLTNNVEQVVRALEGSK 735
Query: 56 LLEVTEDGTKVKGNIIRH 73
++E +ED V+ ++
Sbjct: 736 IVEFSEDQKMVRRKQVKQ 753
>gi|13357170|gb|AAK20026.1|AF234184_1 sex-lethal protein SXL2 [Lucilia cuprina]
Length = 325
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 56/114 (49%), Gaps = 6/114 (5%)
Query: 159 DPDDVVKALRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFS 218
D + +K+L VT +++ + + + +YV LP D +E +F
Sbjct: 155 DAQNAIKSLNG-----VTVRNKRLKVSYARPGGESIKDTNLYVTNLPRTITDDELEKIFG 209
Query: 219 KYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNPCPPDYQSSILT 272
KYG + ++ + K TGK +G AFV F+ +EEA +A+ LN P+ S LT
Sbjct: 210 KYGNIVQKNILRDKLTGKPRGVAFVRFNKREEAQEAISA-LNNVIPEGASQPLT 262
>gi|195997575|ref|XP_002108656.1| hypothetical protein TRIADDRAFT_5340 [Trichoplax adhaerens]
gi|190589432|gb|EDV29454.1| hypothetical protein TRIADDRAFT_5340, partial [Trichoplax
adhaerens]
Length = 172
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 35/57 (61%)
Query: 199 IYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKAL 255
I++ LPP + ++ F KYG V+ V L + K TG+L+GF FV F T E A KAL
Sbjct: 89 IFIGGLPPNTSDEDLKIYFGKYGVVSEVELLRDKETGRLRGFGFVSFDTPEGAQKAL 145
>gi|391341664|ref|XP_003745147.1| PREDICTED: lupus La protein-like [Metaseiulus occidentalis]
Length = 360
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 76/152 (50%), Gaps = 8/152 (5%)
Query: 109 LYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE-IEVSVFLKCNKLARLTHDPDDVVKAL 167
L ++I+ +E Y D NL KD+F QE+ I++ V L N+L LT D + + KA+
Sbjct: 19 LREKIIYQVEHYFGDFNLPKDKFLLSKTQENEGWIDLDVLLTFNRLRSLTTDREMISKAV 78
Query: 168 --RKSKLLEVTEDGTKVRRT----VVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYG 221
S L+EV+ED TK+RR + K + T+YV+ P + D + F ++
Sbjct: 79 LSSDSGLIEVSEDRTKLRRNPERPLPEAFKQQFLDKTVYVKGFPKDTPLDDLIEFFKQF- 137
Query: 222 KVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAK 253
+ V + ++ + KG FV + E A K
Sbjct: 138 EAGCVKMRRYSYNREFKGSVFVLLPSVEAAQK 169
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE-IEVSVFLKCNKLARLTHDPDDVVKAL--RKSKLL 57
+E Y D NL KD+F QE+ I++ V L N+L LT D + + KA+ S L+
Sbjct: 27 VEHYFGDFNLPKDKFLLSKTQENEGWIDLDVLLTFNRLRSLTTDREMISKAVLSSDSGLI 86
Query: 58 EVTEDGTKVKGN 69
EV+ED TK++ N
Sbjct: 87 EVSEDRTKLRRN 98
>gi|348677689|gb|EGZ17506.1| hypothetical protein PHYSODRAFT_501188 [Phytophthora sojae]
Length = 293
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 191 KPDVDEC-TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKE 249
K V C T+++++LP E E I + G +T V LP + T KLKGF +VEFS+++
Sbjct: 162 KKAVKGCRTVFIKQLPYEVEEGTIREALASCGTITSVRLPIWNHTKKLKGFGYVEFSSED 221
Query: 250 EA-AKALELGL 259
EA A A G+
Sbjct: 222 EALAAARRSGM 232
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%)
Query: 196 ECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKAL 255
E T+YVE +P A + + FS G V V +P+++ +GK +G+A V F + KAL
Sbjct: 67 EATVYVEGIPYRANEGDLVTHFSSCGTVREVRMPRYQDSGKPRGYAHVVFDDEAALKKAL 126
Query: 256 EL 257
+L
Sbjct: 127 KL 128
>gi|411117881|ref|ZP_11390262.1| RRM domain-containing RNA-binding protein [Oscillatoriales
cyanobacterium JSC-12]
gi|410711605|gb|EKQ69111.1| RRM domain-containing RNA-binding protein [Oscillatoriales
cyanobacterium JSC-12]
Length = 100
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 35/59 (59%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
+IYV L E D + +VF++YG V V LP + TG+++GF FVE S E A++
Sbjct: 2 SIYVGNLSYEVTEDDLTAVFAEYGSVKRVQLPTDRETGRMRGFGFVEMSADAEEDAAID 60
>gi|224488073|sp|A8WLV5.2|EIF3G_CAEBR RecName: Full=Eukaryotic translation initiation factor 3 subunit G;
Short=eIF3g; AltName: Full=Eukaryotic translation
initiation factor 3 RNA-binding subunit; Short=eIF-3
RNA-binding subunit; AltName: Full=Eukaryotic
translation initiation factor 3 subunit 4
Length = 261
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 37/61 (60%)
Query: 195 DECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKA 254
DE T V LP E D + VF + G+V + + + K TG KGFAFV F ++++AA+A
Sbjct: 179 DENTCRVTNLPQEMNEDELRDVFGRIGRVIRIFIARDKITGLPKGFAFVTFESRDDAARA 238
Query: 255 L 255
+
Sbjct: 239 I 239
>gi|52075416|emb|CAG29242.1| sex-lethal protein [Bactrocera oleae]
Length = 339
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 6/100 (6%)
Query: 178 DGTKVR--RTVVVQDKP---DVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFK 232
+G VR R V +P + + +YV LP D ++++F KYG + ++ + K
Sbjct: 167 NGITVRNKRLKVSYARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGMIVQKNILRDK 226
Query: 233 STGKLKGFAFVEFSTKEEAAKALELGLNPCPPDYQSSILT 272
TGK +G AFV F+ +EEA +A+ LN P+ S LT
Sbjct: 227 LTGKPRGVAFVRFNKREEAQEAIS-ALNNVIPEGGSQPLT 265
>gi|428306262|ref|YP_007143087.1| RNP-1 like RNA-binding protein [Crinalium epipsammum PCC 9333]
gi|428247797|gb|AFZ13577.1| RNP-1 like RNA-binding protein [Crinalium epipsammum PCC 9333]
Length = 111
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%)
Query: 197 CTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
+IYV L + + I F++YG V V LP + TG+++GFAFVE T E KA+E
Sbjct: 1 MSIYVGNLSYQVTQEDISQTFAEYGTVKRVQLPTDRETGRMRGFAFVEMETDAEEEKAIE 60
>gi|341900113|gb|EGT56048.1| hypothetical protein CAEBREN_07157 [Caenorhabditis brenneri]
Length = 452
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 38/66 (57%)
Query: 190 DKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKE 249
D+ DE T V LP E D + VF K G+V + + + K T KGFAFV F +++
Sbjct: 192 DRNRSDENTCRVTNLPQEMNEDELRDVFGKIGRVIRIFIARDKITALPKGFAFVTFESRD 251
Query: 250 EAAKAL 255
+AA+A+
Sbjct: 252 DAARAI 257
>gi|67517727|ref|XP_658649.1| hypothetical protein AN1045.2 [Aspergillus nidulans FGSC A4]
gi|40747007|gb|EAA66163.1| hypothetical protein AN1045.2 [Aspergillus nidulans FGSC A4]
gi|259488653|tpe|CBF88265.1| TPA: RNA-binding La domain protein (AFU_orthologue; AFUA_1G12590)
[Aspergillus nidulans FGSC A4]
Length = 400
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 80/170 (47%), Gaps = 22/170 (12%)
Query: 112 QIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSV-FLKCNKLARLTHDPDDVVKALRKS 170
+I +EFY SDSNL D+F + S V + L K R +V+AL+ S
Sbjct: 108 EIRKQVEFYFSDSNLPMDKFLLSKVGGSKNNPVPLELLHSFKRMRRFQPFSAIVEALKNS 167
Query: 171 KLLEVTEDGTKVRRTV----VVQDKPDVDECTIYVEKL-------------PPEAEHDYI 213
+ LE+T++ T VRR V V+D D ++ +K P + D I
Sbjct: 168 ETLELTDNDTAVRRKVPLPETVKDTHDPTVVKVFEDKAMARSIYAKGFGEETPTTQLD-I 226
Query: 214 ESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNPCP 263
E+ F+ YG + + L + + KG FVEF++ EE KA L L+P P
Sbjct: 227 EAFFAPYGPINAIRL-RRTNEKYFKGSVFVEFAS-EEKQKAF-LELDPMP 273
>gi|365766477|gb|EHN07973.1| Lhp1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 275
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 75/157 (47%), Gaps = 20/157 (12%)
Query: 108 QLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE-IEVSVFLKCNKLARLTHDP-DDVVK 165
++ + + +EFY S+ N DRF +++ + +S N++ + + P D V++
Sbjct: 28 EVLDRCLKQVEFYFSEFNFPYDRFLRTTAEKNDGWVPISTIATFNRMKK--YRPVDKVIE 85
Query: 166 ALRKSKLLEVTEDGTKVRR------TVVVQDKPDVDECTIYVEKLP---------PEAEH 210
ALR S++LEV+ DG V+R T + + ++ T+ V P PE +
Sbjct: 86 ALRSSEILEVSADGENVKRRVPLDLTAARNARIEQNQRTLAVMNFPHEDVEASQIPELQE 145
Query: 211 DYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFST 247
+ +E+ F K G++ V L + K G VEF T
Sbjct: 146 N-LEAFFKKLGEINQVRLRRDHRNKKFNGTVLVEFKT 181
Score = 38.1 bits (87), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE-IEVSVFLKCNKLARLTHDP-DDVVKALRKSKLLE 58
+EFY S+ N DRF +++ + +S N++ + + P D V++ALR S++LE
Sbjct: 37 VEFYFSEFNFPYDRFLRTTAEKNDGWVPISTIATFNRMKK--YRPVDKVIEALRSSEILE 94
Query: 59 VTEDGTKVKGNI 70
V+ DG VK +
Sbjct: 95 VSADGENVKRRV 106
>gi|6320152|ref|NP_010232.1| Lhp1p [Saccharomyces cerevisiae S288c]
gi|585379|sp|P33399.2|LAH1_YEAST RecName: Full=La protein homolog; AltName: Full=La autoantigen
homolog; AltName: Full=La ribonucleoprotein
gi|458557|gb|AAA16515.1| La homolog [Saccharomyces cerevisiae]
gi|493220|gb|AAA21777.1| La protein homologue; phenotype: not essential for vegetative
growth [Saccharomyces cerevisiae]
gi|1431044|emb|CAA98612.1| YLA1 [Saccharomyces cerevisiae]
gi|45270636|gb|AAS56699.1| YDL051W [Saccharomyces cerevisiae]
gi|151941948|gb|EDN60304.1| La protein [Saccharomyces cerevisiae YJM789]
gi|207346936|gb|EDZ73276.1| YDL051Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256269654|gb|EEU04933.1| Lhp1p [Saccharomyces cerevisiae JAY291]
gi|259145193|emb|CAY78457.1| Lhp1p [Saccharomyces cerevisiae EC1118]
gi|285810981|tpg|DAA11805.1| TPA: Lhp1p [Saccharomyces cerevisiae S288c]
gi|323305726|gb|EGA59466.1| Lhp1p [Saccharomyces cerevisiae FostersB]
gi|392300068|gb|EIW11159.1| Lhp1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 275
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 75/157 (47%), Gaps = 20/157 (12%)
Query: 108 QLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE-IEVSVFLKCNKLARLTHDP-DDVVK 165
++ + + +EFY S+ N DRF +++ + +S N++ + + P D V++
Sbjct: 28 EVLDRCLKQVEFYFSEFNFPYDRFLRTTAEKNDGWVPISTIATFNRMKK--YRPVDKVIE 85
Query: 166 ALRKSKLLEVTEDGTKVRR------TVVVQDKPDVDECTIYVEKLP---------PEAEH 210
ALR S++LEV+ DG V+R T + + ++ T+ V P PE +
Sbjct: 86 ALRSSEILEVSADGENVKRRVPLDLTAARNARIEQNQRTLAVMNFPHEDVEASQIPELQE 145
Query: 211 DYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFST 247
+ +E+ F K G++ V L + K G VEF T
Sbjct: 146 N-LEAFFKKLGEINQVRLRRDHRNKKFNGTVLVEFKT 181
Score = 37.7 bits (86), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE-IEVSVFLKCNKLARLTHDP-DDVVKALRKSKLLE 58
+EFY S+ N DRF +++ + +S N++ + + P D V++ALR S++LE
Sbjct: 37 VEFYFSEFNFPYDRFLRTTAEKNDGWVPISTIATFNRMKK--YRPVDKVIEALRSSEILE 94
Query: 59 VTEDGTKVKGNI 70
V+ DG VK +
Sbjct: 95 VSADGENVKRRV 106
>gi|190405061|gb|EDV08328.1| hypothetical protein SCRG_00550 [Saccharomyces cerevisiae RM11-1a]
Length = 275
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 75/157 (47%), Gaps = 20/157 (12%)
Query: 108 QLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE-IEVSVFLKCNKLARLTHDP-DDVVK 165
++ + + +EFY S+ N DRF +++ + +S N++ + + P D V++
Sbjct: 28 EVLDRCLKQVEFYFSEFNFPYDRFLRTTAEKNDGWVPISTIATFNRMKK--YRPVDKVIE 85
Query: 166 ALRKSKLLEVTEDGTKVRR------TVVVQDKPDVDECTIYVEKLP---------PEAEH 210
ALR S++LEV+ DG V+R T + + ++ T+ V P PE +
Sbjct: 86 ALRSSEILEVSADGENVKRRVPLDLTAARNARIEQNQRTLAVMNFPHEDVEASQIPELQE 145
Query: 211 DYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFST 247
+ +E+ F K G++ V L + K G VEF T
Sbjct: 146 N-LEAFFKKLGEINQVRLRRDHRNKKFNGTVLVEFKT 181
Score = 37.7 bits (86), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE-IEVSVFLKCNKLARLTHDP-DDVVKALRKSKLLE 58
+EFY S+ N DRF +++ + +S N++ + + P D V++ALR S++LE
Sbjct: 37 VEFYFSEFNFPYDRFLRTTAEKNDGWVPISTIATFNRMKK--YRPVDKVIEALRSSEILE 94
Query: 59 VTEDGTKVKGNI 70
V+ DG VK +
Sbjct: 95 VSADGENVKRRV 106
>gi|443734794|gb|ELU18651.1| hypothetical protein CAPTEDRAFT_73288, partial [Capitella teleta]
Length = 461
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 86/181 (47%), Gaps = 36/181 (19%)
Query: 107 KQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN--KLARLTHDPDDVV 164
++L +I+ +EFY SD+N+ KD F + ++ + + VS+ L + K+ L+ D V
Sbjct: 53 EELKDRIIKQVEFYFSDANILKDAFLLKHVRRNKQGFVSLKLITSFRKMKSLSKDYRVVA 112
Query: 165 KALRKSKLLEVTEDGTKVRRTVVVQDKPDVDEC----TIYVEKLPPEAEHDYIESV---F 217
+LR S LEV ++GTKVRR + P+ DE T+ LP E+ IE+V F
Sbjct: 113 FSLRLSDQLEVNDEGTKVRRKDPL---PEHDETTPSRTVVAINLP--MENPTIENVAELF 167
Query: 218 SKYGKVTYVSL------------------PKFKSTGKLKGFAFVEFSTKEEAAKALELGL 259
S G+V + + P+ ST A VEF T E A KA E
Sbjct: 168 SSCGEVVLLRILRPGKTIPPDVRKHINKHPEIGST----VCAVVEFETHESAKKATETMC 223
Query: 260 N 260
N
Sbjct: 224 N 224
Score = 37.4 bits (85), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN--KLARLTHDPDDVVKALRKSKLLE 58
+EFY SD+N+ KD F + ++ + + VS+ L + K+ L+ D V +LR S LE
Sbjct: 63 VEFYFSDANILKDAFLLKHVRRNKQGFVSLKLITSFRKMKSLSKDYRVVAFSLRLSDQLE 122
Query: 59 VTEDGTKVK 67
V ++GTKV+
Sbjct: 123 VNDEGTKVR 131
>gi|427415488|ref|ZP_18905672.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
7375]
gi|425756163|gb|EKU97020.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
7375]
Length = 90
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 38/59 (64%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
+IYV L +A ++ + +VF++YG V V LP + TG+++GFAFVE + E A+E
Sbjct: 2 SIYVGNLSYDATNEDLTAVFAEYGTVKSVHLPTDRETGRMRGFAFVEMGAESEETAAIE 60
>gi|119486604|ref|ZP_01620654.1| RNA-binding region [Lyngbya sp. PCC 8106]
gi|119456221|gb|EAW37353.1| RNA-binding region [Lyngbya sp. PCC 8106]
Length = 100
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 35/60 (58%)
Query: 197 CTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
++Y+ L E D ++SVF+ YG V V +P + TG+ +GFAFVE T E A+E
Sbjct: 1 MSVYIGNLAYEVTEDDLKSVFTDYGSVKRVHIPTDRETGRSRGFAFVEMDTDSEETSAIE 60
>gi|90407376|ref|ZP_01215561.1| hypothetical RNA-binding protein [Psychromonas sp. CNPT3]
gi|90311527|gb|EAS39627.1| hypothetical RNA-binding protein [Psychromonas sp. CNPT3]
Length = 152
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 34/57 (59%)
Query: 193 DVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKE 249
D D T+YV LP A I ++FS++GKV V L K K TGK +GF FVE K+
Sbjct: 64 DFDTITLYVGNLPYRANEIAIRTLFSEHGKVLSVRLMKDKHTGKRRGFGFVEMPEKD 120
>gi|449444086|ref|XP_004139806.1| PREDICTED: uncharacterized protein LOC101207485 [Cucumis sativus]
Length = 492
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 77/170 (45%), Gaps = 23/170 (13%)
Query: 108 QLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVK 165
++ Q+++N +E+Y SD NL + + + P+ + +SV K+ L + +
Sbjct: 165 EVSQKLLNQVEYYFSDLNLATTDHLMRFVNKDPDGYVPISVVASFKKIKALINSHFQLAN 224
Query: 166 ALRKSKLLEVTEDGTKVRRTVVVQDKPDVDEC---TIYVEKLPPEAEHDYIESVFSKYGK 222
LR S L V+EDG KV+R + D++E + E LP + H + +FS G
Sbjct: 225 ILRNSSKLLVSEDGKKVKRKQPFSES-DMEELQSRIVIAENLPEDHCHQNLMKIFSAVGS 283
Query: 223 VTYVSL--PKFKSTG--------KLKGF-------AFVEFSTKEEAAKAL 255
V + P+ +G K G AFVE+ + E A KA+
Sbjct: 284 VKNIRTCQPQISDSGASSTSKSAKADGMHYSNKLHAFVEYESVELAEKAV 333
>gi|268530192|ref|XP_002630222.1| C. briggsae CBR-EIF-3.G.1 protein [Caenorhabditis briggsae]
gi|268570827|ref|XP_002648625.1| C. briggsae CBR-EIF-3.G.2 protein [Caenorhabditis briggsae]
Length = 255
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 37/61 (60%)
Query: 195 DECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKA 254
DE T V LP E D + VF + G+V + + + K TG KGFAFV F ++++AA+A
Sbjct: 173 DENTCRVTNLPQEMNEDELRDVFGRIGRVIRIFIARDKITGLPKGFAFVTFESRDDAARA 232
Query: 255 L 255
+
Sbjct: 233 I 233
>gi|425434850|ref|ZP_18815314.1| putative RNA-binding protein rbpA [Microcystis aeruginosa PCC 9432]
gi|389675574|emb|CCH95321.1| putative RNA-binding protein rbpA [Microcystis aeruginosa PCC 9432]
Length = 97
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/59 (45%), Positives = 35/59 (59%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
+I+V L E D + VF YGKV V +P K TG+ +GFAFVE K + AKA+E
Sbjct: 2 SIFVGNLSYEISQDDLVEVFQDYGKVQRVHIPVDKETGRKRGFAFVEMENKAQEAKAIE 60
>gi|443919574|gb|ELU39701.1| RNA recognition motif domain-containing protein [Rhizoctonia solani
AG-1 IA]
Length = 716
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 39/74 (52%)
Query: 183 RRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAF 242
+R V D T++V L D + + F ++G VT+V LP + +GK KGF +
Sbjct: 195 KRAQVFGDSESQPSTTLFVGNLSWNTTEDGLWTAFGEFGDVTHVRLPTDQESGKPKGFGY 254
Query: 243 VEFSTKEEAAKALE 256
VEF +E A KA E
Sbjct: 255 VEFGDQEGATKAYE 268
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 36/59 (61%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
T++V +L ++D++ F G V + +++GK +GFA+VEFS+ EA KA+E
Sbjct: 111 TVFVGRLSWNVDNDWLAQEFQGCGTVVAARVQMDRNSGKSRGFAYVEFSSPAEAQKAVE 169
>gi|389614818|dbj|BAM20426.1| simila to CG17386, partial [Papilio polytes]
Length = 206
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 72/131 (54%), Gaps = 14/131 (10%)
Query: 107 KQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN--KLARLTHDPDDVV 164
++L +I++ +EFY SD+N+ KD F + ++ + E VS+ L + ++ LT D V
Sbjct: 51 EELANRIVSQVEFYFSDANITKDAFLLKHVRRNKEGYVSLKLISSFKRVKHLTKDWRVVA 110
Query: 165 KALRKSKLLEVTEDGTKVRRTVVVQDKPDVDEC----TIYVEKLP---PEAEHDYIESVF 217
+AL++S LE+ E GTK+RR + P DE T+ ++P P E+ + +F
Sbjct: 111 EALKRSSKLEINELGTKLRR---IDPLPAYDETTPSRTVVAVRMPIDKPSVEN--VSRLF 165
Query: 218 SKYGKVTYVSL 228
+ G++ V +
Sbjct: 166 ASCGEIALVRV 176
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN--KLARLTHDPDDVVKALRKSKLLE 58
+EFY SD+N+ KD F + ++ + E VS+ L + ++ LT D V +AL++S LE
Sbjct: 61 VEFYFSDANITKDAFLLKHVRRNKEGYVSLKLISSFKRVKHLTKDWRVVAEALKRSSKLE 120
Query: 59 VTEDGTKVK 67
+ E GTK++
Sbjct: 121 INELGTKLR 129
>gi|449492647|ref|XP_004159060.1| PREDICTED: la-related protein 7-like [Cucumis sativus]
Length = 356
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 77/170 (45%), Gaps = 23/170 (13%)
Query: 108 QLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVK 165
++ Q+++N +E+Y SD NL + + + P+ + +SV K+ L + +
Sbjct: 165 EVSQKLLNQVEYYFSDLNLATTDHLMRFVNKDPDGYVPISVVASFKKIKALINSHFQLAN 224
Query: 166 ALRKSKLLEVTEDGTKVRRTVVVQDKPDVDEC---TIYVEKLPPEAEHDYIESVFSKYGK 222
LR S L V+EDG KV+R + D++E + E LP + H + +FS G
Sbjct: 225 ILRNSSKLLVSEDGKKVKRKQPFSES-DMEELQSRIVIAENLPEDHCHQNLMKIFSAVGS 283
Query: 223 VTYVSL--PKFKSTG--------KLKGF-------AFVEFSTKEEAAKAL 255
V + P+ +G K G AFVE+ + E A KA+
Sbjct: 284 VKNIRTCQPQISDSGASSTSKSAKADGMHYSNKLHAFVEYESVELAEKAV 333
>gi|428167580|gb|EKX36537.1| hypothetical protein GUITHDRAFT_57447, partial [Guillardia theta
CCMP2712]
Length = 81
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Query: 111 QQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFL--KCNKLARLTHDPDDVVKALR 168
+QI +EFY SDSNL +D F + E P+ VS+ L K +L+ + ++ ++R
Sbjct: 1 EQIREQLEFYFSDSNLPRDTFLMNKISEDPQGWVSLGLIAKFKRLSMMGATTSMMIDSVR 60
Query: 169 KSKLLEVTEDGTKVRRT 185
SK +EV +GT +RRT
Sbjct: 61 DSKTVEVNAEGTMIRRT 77
Score = 44.3 bits (103), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFL--KCNKLARLTHDPDDVVKALRKSKLLE 58
+EFY SDSNL +D F + E P+ VS+ L K +L+ + ++ ++R SK +E
Sbjct: 7 LEFYFSDSNLPRDTFLMNKISEDPQGWVSLGLIAKFKRLSMMGATTSMMIDSVRDSKTVE 66
Query: 59 VTEDGTKVK 67
V +GT ++
Sbjct: 67 VNAEGTMIR 75
>gi|359321995|ref|XP_003639749.1| PREDICTED: MKI67 FHA domain-interacting nucleolar
phosphoprotein-like [Canis lupus familiaris]
Length = 297
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 174 EVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKS 233
EVT+ RR ++K + IYV LPP I + FS++G VT L + K
Sbjct: 25 EVTQ---ACRRAAQQKEKEKLTPGVIYVGHLPPALYETQIRAYFSQFGTVTRFRLSRSKR 81
Query: 234 TGKLKGFAFVEFSTKEEAAKALELGLN 260
TG KG+AFVEF++ E+ AK + +N
Sbjct: 82 TGNSKGYAFVEFAS-EDVAKIVADTMN 107
>gi|308322103|gb|ADO28189.1| eukaryotic translation initiation factor 3 subunit g [Ictalurus
furcatus]
Length = 294
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 44/78 (56%)
Query: 178 DGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKL 237
DG R + ++ D TI V LP + ++ +F +G ++ + L K K+TG+
Sbjct: 194 DGGTRRGESMQPNRRADDNATIRVTNLPEDTRETDLQELFRPFGSISRIYLAKDKNTGQS 253
Query: 238 KGFAFVEFSTKEEAAKAL 255
KGFAF+ F +E+AA+A+
Sbjct: 254 KGFAFISFHRREDAARAI 271
>gi|172035063|ref|YP_001801564.1| RNA-binding protein [Cyanothece sp. ATCC 51142]
gi|354551929|ref|ZP_08971237.1| RNP-1 like RNA-binding protein [Cyanothece sp. ATCC 51472]
gi|171696517|gb|ACB49498.1| RNA-binding protein [Cyanothece sp. ATCC 51142]
gi|353555251|gb|EHC24639.1| RNP-1 like RNA-binding protein [Cyanothece sp. ATCC 51472]
Length = 81
Score = 51.6 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 37/59 (62%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
+IYV L E + +VFS YG V + +P + TG+ +GFAFVE T+EE +KA++
Sbjct: 2 SIYVGNLAYEVTDADLNTVFSDYGSVKRIHIPTDRETGRPRGFAFVEMDTEEEESKAID 60
>gi|429965807|gb|ELA47804.1| hypothetical protein VCUG_00765 [Vavraia culicis 'floridensis']
Length = 361
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 37/72 (51%)
Query: 184 RTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFV 243
R DK D+ T++V+ +E F K GKV V +PK + T + KGF +V
Sbjct: 125 RASKQSDKSQADDATVFVKGFDRSVTELMVEEEFGKIGKVVNVRMPKDRDTSENKGFCYV 184
Query: 244 EFSTKEEAAKAL 255
EFS + A KAL
Sbjct: 185 EFSNAQSAKKAL 196
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 185 TVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVE 244
T+V+ T++V+ LP A + I+ VFSKY V V LP + + +GF FVE
Sbjct: 207 TIVIDTPKKTGNFTLFVKNLPYTATVEDIKDVFSKY-NVKNVRLPADEDEERNRGFCFVE 265
Query: 245 FSTKEEAAKALELGLN 260
F +++ K L N
Sbjct: 266 FGNEQDMKKVLNGKFN 281
>gi|198425833|ref|XP_002129136.1| PREDICTED: similar to CG17386 CG17386-PA [Ciona intestinalis]
Length = 572
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 76/148 (51%), Gaps = 20/148 (13%)
Query: 107 KQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFL--KCNKLARLTHDPDDVV 164
++L Q+I+ ++E LS+ L KD + + ++ + + VS+ L + +LT D D VV
Sbjct: 272 EKLLQKIIAIVEDTLSNEKLTKDLYVLRQMRRNSQGYVSLKLVASVKAIKKLTSDYDTVV 331
Query: 165 KALRKSKLLEVTEDGTKVRR-------TVVVQDKPDVDECTIYVEKLPPEAEHDYIESVF 217
ALRKS LEV + TKVRR +V +P ++ V L PE E IESV
Sbjct: 332 LALRKSNKLEVNKSATKVRRKDALPAKSVATSKEPS----SLVVVGL-PEVEAT-IESVI 385
Query: 218 SKY---GKVTYVSL--PKFKSTGKLKGF 240
SKY G + V + PK L+G+
Sbjct: 386 SKYKEFGTIAQVRILSPKRPIPAYLQGY 413
>gi|452825487|gb|EME32483.1| RNA-binding protein [Galdieria sulphuraria]
Length = 523
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 40/61 (65%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALEL 257
+++V L + D + FS++GKVT V L + K TG++ G+AFV F +EEA KA++L
Sbjct: 178 SVFVGDLGGDINEDILLDAFSRFGKVTAVDLKRDKYTGEILGYAFVYFVQEEEAQKAMKL 237
Query: 258 G 258
G
Sbjct: 238 G 238
>gi|443477394|ref|ZP_21067245.1| RNP-1 like RNA-binding protein [Pseudanabaena biceps PCC 7429]
gi|443017490|gb|ELS31918.1| RNP-1 like RNA-binding protein [Pseudanabaena biceps PCC 7429]
Length = 95
Score = 51.6 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 29/59 (49%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFS--TKEEAAKA 254
TIYV L +A D + SVFS YG V V LP + TG+++GFAFV+ +EEAA A
Sbjct: 2 TIYVGNLSYQAAKDDLTSVFSDYGTVKRVQLPTDQETGRVRGFAFVDMEDDAQEEAAIA 60
>gi|409049562|gb|EKM59039.1| hypothetical protein PHACADRAFT_249208 [Phanerochaete carnosa
HHB-10118-sp]
Length = 292
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 60/135 (44%), Gaps = 8/135 (5%)
Query: 122 SDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEVTEDGTK 181
+D N + R F + SPE +K L D +++ K +E ++ +
Sbjct: 72 TDRNTGRSRGFGFVTFASPEA-------VDKALELNGKEIDG-RSINVDKSVEKDQNQVR 123
Query: 182 VRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFA 241
RR D P ++V L +A + + VFS YG + V +P + +G+ KGF
Sbjct: 124 ERRARTFGDAPSEPSSRLFVGNLSFDATEEQLWEVFSDYGSIKSVHMPTSRDSGRPKGFG 183
Query: 242 FVEFSTKEEAAKALE 256
+VEF E A KA E
Sbjct: 184 YVEFEDIESAKKAHE 198
Score = 44.3 bits (103), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 37/60 (61%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALEL 257
TI+V L ++ ++ES F++ G++ + ++TG+ +GF FV F++ E KALEL
Sbjct: 40 TIFVGMLSWNVDNAWLESEFAQCGEIVSAHVQTDRNTGRSRGFGFVTFASPEAVDKALEL 99
>gi|156097965|ref|XP_001615015.1| eukaryotic translation initiation factor 3 subunit 4 [Plasmodium
vivax Sal-1]
gi|148803889|gb|EDL45288.1| eukaryotic translation initiation factor 3 subunit 4, putative
[Plasmodium vivax]
Length = 269
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 37/61 (60%)
Query: 196 ECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKAL 255
ECT+ V L + + ++F + G+++ + L K K T KGFAF+ +S +EEA +A+
Sbjct: 187 ECTVRVTNLSEDVNESELSNLFGRVGQISRMFLAKHKETQNSKGFAFITYSNREEAKRAI 246
Query: 256 E 256
E
Sbjct: 247 E 247
>gi|304055|gb|AAA17426.1| RNA-binding protein [Anabaena sp.]
Length = 103
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 35/59 (59%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
++YV L + D + +VF++YG V V LP + TG+++GF FVE + E A+E
Sbjct: 2 SVYVGNLSYDVTEDSLNAVFAEYGSVKRVQLPTDRETGRMRGFGFVEMGSDAEETAAIE 60
>gi|17229579|ref|NP_486127.1| RNA-binding protein RbpA2 [Nostoc sp. PCC 7120]
gi|75909339|ref|YP_323635.1| RNA-binding region RNP-1 [Anabaena variabilis ATCC 29413]
gi|17131178|dbj|BAB73786.1| RNA-binding protein RbpA2 [Nostoc sp. PCC 7120]
gi|75703064|gb|ABA22740.1| RNA-binding region RNP-1 [Anabaena variabilis ATCC 29413]
Length = 103
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 35/59 (59%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
++YV L + D + +VF++YG V V LP + TG+++GF FVE + E A+E
Sbjct: 2 SVYVGNLSYDVTEDSLNAVFAEYGSVKRVQLPTDRETGRMRGFGFVEMGSDAEETAAIE 60
>gi|414075426|ref|YP_006994744.1| RNA-binding protein [Anabaena sp. 90]
gi|413968842|gb|AFW92931.1| RNA-binding protein [Anabaena sp. 90]
Length = 108
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 35/59 (59%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
+IYV L E + + +VF+ YG V V LP + TG+L+GF FVE T+ E A++
Sbjct: 2 SIYVGNLSYEVTQEALSAVFADYGAVKRVQLPTDRETGRLRGFGFVEMGTEAEEQAAID 60
>gi|260434962|ref|ZP_05788932.1| RNA-binding region RNP-1 [Synechococcus sp. WH 8109]
gi|260412836|gb|EEX06132.1| RNA-binding region RNP-1 [Synechococcus sp. WH 8109]
Length = 95
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 38/59 (64%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
TIY+ L +AE +++ +FS+YG+V SLP + TG+ +GFAFVE + KA++
Sbjct: 2 TIYIGNLSFQAEQEHLFDLFSEYGEVKNCSLPLDRETGRKRGFAFVEMVNDADEQKAID 60
>gi|449540824|gb|EMD31812.1| hypothetical protein CERSUDRAFT_88684 [Ceriporiopsis subvermispora
B]
Length = 292
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 47/92 (51%)
Query: 165 KALRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVT 224
+A+ K +E + + +R DK ++V L +A D + F++YG +
Sbjct: 112 RAVNIDKSIEKDKGAVRQKRAEAYGDKASEPSSVLFVGNLSWDATEDTLWETFNEYGDIK 171
Query: 225 YVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
V +P + TGK KGFA+VEFS E + KA E
Sbjct: 172 SVRVPTDRETGKPKGFAYVEFSDIEASKKAFE 203
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 34/58 (58%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKAL 255
TI+V KL ++D++ F++ G+V + ++TGK +GF +V F+T E A+
Sbjct: 45 TIFVGKLSWNVDNDWLAQEFAECGEVVSARVQMDRNTGKSRGFGYVTFATVEAVDAAI 102
>gi|123479777|ref|XP_001323045.1| La domain containing protein [Trichomonas vaginalis G3]
gi|121905902|gb|EAY10822.1| La domain containing protein [Trichomonas vaginalis G3]
Length = 232
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 54/107 (50%), Gaps = 2/107 (1%)
Query: 113 IMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKS 170
I MEFYLS+SN+ D F + + E + ++++ FL N++ L +D+++A S
Sbjct: 34 IREQMEFYLSNSNIESDSFMKEAINEREDRYVKIATFLTFNRMKSLNATEEDIIEACSAS 93
Query: 171 KLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVF 217
K LEV + VR V P T+++E D I+++F
Sbjct: 94 KHLEVNKAEKIVRSKVPFVSDPRRSYRTVHIEGFDETETLDDIKALF 140
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
MEFYLS+SN+ D F + + E + ++++ FL N++ L +D+++A SK LE
Sbjct: 38 MEFYLSNSNIESDSFMKEAINEREDRYVKIATFLTFNRMKSLNATEEDIIEACSASKHLE 97
Query: 59 VTEDGTKVKGNI 70
V + V+ +
Sbjct: 98 VNKAEKIVRSKV 109
>gi|119495439|ref|XP_001264504.1| RNA-binding La domain protein [Neosartorya fischeri NRRL 181]
gi|119412666|gb|EAW22607.1| RNA-binding La domain protein [Neosartorya fischeri NRRL 181]
Length = 401
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 79/172 (45%), Gaps = 22/172 (12%)
Query: 110 YQQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSV-FLKCNKLARLTHDPDDVVKALR 168
+ +I +EFY SDSNL D+F + S V + L K R +V+AL+
Sbjct: 112 HDEIRKQVEFYFSDSNLPMDKFLLSKVGGSSNRPVPLELLHSFKRMRRFQPFSAIVEALK 171
Query: 169 KSKLLEVTEDGTKVRRTV----VVQDKPDVDECTIYVEKL-------------PPEAEHD 211
S+ LE+T++ T VRR V V + PD ++ ++ P + D
Sbjct: 172 SSETLELTDNDTCVRRKVPLPESVTENPDPSVAKVFEDQAMSRSIYAKGFGEETPTTQID 231
Query: 212 YIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNPCP 263
IE+ F+ YG V + L + KG FVEF+T EE K L L+P P
Sbjct: 232 -IEAFFAPYGPVNAIRLRRTHDR-IFKGSVFVEFAT-EEKQKEF-LALDPKP 279
>gi|67923998|ref|ZP_00517451.1| RNA-binding region RNP-1 (RNA recognition motif) [Crocosphaera
watsonii WH 8501]
gi|416401054|ref|ZP_11687154.1| RNA-binding protein [Crocosphaera watsonii WH 0003]
gi|67854173|gb|EAM49479.1| RNA-binding region RNP-1 (RNA recognition motif) [Crocosphaera
watsonii WH 8501]
gi|357262154|gb|EHJ11338.1| RNA-binding protein [Crocosphaera watsonii WH 0003]
Length = 81
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 37/60 (61%)
Query: 197 CTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
+IYV L E + + + VF++YG V V +P K TG+ +GFAFVE TK E + A+E
Sbjct: 1 MSIYVGNLSYEVKEEDLNEVFAEYGTVKRVHVPTDKETGRPRGFAFVELETKAEESSAIE 60
>gi|78213170|ref|YP_381949.1| RNA recognition motif-containing protein [Synechococcus sp. CC9605]
gi|78197629|gb|ABB35394.1| RNA-binding region RNP-1 (RNA recognition motif) [Synechococcus sp.
CC9605]
Length = 95
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 38/59 (64%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
TIY+ L +AE +++ +FS+YG+V SLP + TG+ +GFAFVE + KA++
Sbjct: 2 TIYIGNLSFQAEQEHLFDLFSEYGEVKNCSLPLDRETGRKRGFAFVEMVNDADEQKAID 60
>gi|124512470|ref|XP_001349368.1| eukaryotictranslation initiation factor, putative [Plasmodium
falciparum 3D7]
gi|23499137|emb|CAD51217.1| eukaryotictranslation initiation factor, putative [Plasmodium
falciparum 3D7]
Length = 266
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%)
Query: 196 ECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKAL 255
ECT+ V L + + + ++F K G + + L K K T KGFAF+ +S +EEA +A+
Sbjct: 184 ECTVRVTNLSEDVNENELSNLFGKVGNIVRMFLAKHKETQNSKGFAFITYSKREEAKRAI 243
Query: 256 E 256
E
Sbjct: 244 E 244
>gi|428203095|ref|YP_007081684.1| RRM domain-containing RNA-binding protein [Pleurocapsa sp. PCC
7327]
gi|427980527|gb|AFY78127.1| RRM domain-containing RNA-binding protein [Pleurocapsa sp. PCC
7327]
Length = 99
Score = 51.6 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 35/59 (59%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
+IYV L E + +E VF +YG V V +P + TG+ +GFAFVE T+ E A+E
Sbjct: 2 SIYVGNLSYEVTQEDLERVFKEYGTVNRVQMPTDRETGRPRGFAFVEMGTEAEETTAIE 60
>gi|302920668|ref|XP_003053121.1| hypothetical protein NECHADRAFT_59146 [Nectria haematococca mpVI
77-13-4]
gi|256734061|gb|EEU47408.1| hypothetical protein NECHADRAFT_59146 [Nectria haematococca mpVI
77-13-4]
Length = 742
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 197 CTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
+YV+ + PEA D +F +YG VT SL + GK +GF FV F+T E AAKA++
Sbjct: 241 TNVYVKNISPEATEDDFRQLFEQYGDVTSSSLAR-DQEGKSRGFGFVNFTTHESAAKAVD 299
>gi|54296292|ref|YP_122661.1| hypothetical protein lpp0321 [Legionella pneumophila str. Paris]
gi|53750077|emb|CAH11469.1| hypothetical protein lpp0321 [Legionella pneumophila str. Paris]
Length = 91
Score = 51.6 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 38/63 (60%)
Query: 199 IYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELG 258
IYV LP + + FS+YGK+ + L K + TG++KGF F+ FS ++EA ALE+
Sbjct: 6 IYVGNLPFGTTEEALSIQFSQYGKIEEMFLIKDRLTGQMKGFGFITFSAQQEAESALEMN 65
Query: 259 LNP 261
P
Sbjct: 66 GQP 68
>gi|397662818|ref|YP_006504356.1| RNA binding protein, cold-inducible rrm [Legionella pneumophila
subsp. pneumophila]
gi|395126229|emb|CCD04410.1| RNA binding protein, cold-inducible rrm [Legionella pneumophila
subsp. pneumophila]
Length = 91
Score = 51.6 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 38/63 (60%)
Query: 199 IYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELG 258
IYV LP + + FS+YGK+ + L K + TG++KGF F+ FS ++EA ALE+
Sbjct: 6 IYVGNLPFGTTEEALSIQFSQYGKIEEMFLIKDRLTGQMKGFGFITFSAQQEAESALEMN 65
Query: 259 LNP 261
P
Sbjct: 66 GQP 68
>gi|226481272|emb|CAX79101.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
Length = 210
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKA 254
++Y+ LP HD + F +YG++ V++P TG++KG+AF+EF +A A
Sbjct: 7 SLYIRHLPDTCRHDDLRRCFGRYGRIVDVTIPLDFFTGRMKGYAFIEFGNPRDAEDA 63
>gi|224097146|ref|XP_002310851.1| predicted protein [Populus trichocarpa]
gi|222853754|gb|EEE91301.1| predicted protein [Populus trichocarpa]
Length = 289
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALEL 257
TI+++ LPP + D++ YG++ + L + ST K K F FV+FST E A +E
Sbjct: 205 TIFLDGLPPHWDEDHVRECVKGYGEIVRIVLARNMSTAKRKDFGFVDFSTHEAAVACIE- 263
Query: 258 GLNPCPPDYQSSILTTTSRLS 278
G+N ++ + +RLS
Sbjct: 264 GINNREFGNGNTKMRVKARLS 284
Score = 44.7 bits (104), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%)
Query: 185 TVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVE 244
T V +++ E I+V L +A + + VF K G+V V L K ST + KG+AFV+
Sbjct: 14 TAVAKERKIKKEYEIFVGGLDRDATEEDLRKVFEKIGEVVEVRLHKNLSTNRNKGYAFVK 73
Query: 245 FSTKEEAAKALELGLNP 261
F+ K +AL NP
Sbjct: 74 FANKGHVKRALSEMKNP 90
>gi|428225351|ref|YP_007109448.1| RNP-1 like RNA-binding protein [Geitlerinema sp. PCC 7407]
gi|427985252|gb|AFY66396.1| RNP-1 like RNA-binding protein [Geitlerinema sp. PCC 7407]
Length = 108
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 37/60 (61%)
Query: 197 CTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
+IY+ L +A + + S+F++YG V V LP + TG+++GF FVE S+ E A++
Sbjct: 1 MSIYIGNLSYQATEEDVSSIFAEYGTVKRVQLPTDRETGRMRGFGFVEMSSDAEELAAID 60
>gi|299469902|emb|CBN76756.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 774
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 191 KPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEE 250
+PD D T+YV L P D I F++ G + V +P+ K TGK++G AFV F+
Sbjct: 311 QPDPD-STVYVGNLDPSVTEDDIREFFAECGAIASVRIPQDKETGKMRGIAFVAFAKHSG 369
Query: 251 AAKALELGLN 260
+AL L ++
Sbjct: 370 VLQALTLHMD 379
>gi|254432068|ref|ZP_05045771.1| RNA-binding protein RbpD [Cyanobium sp. PCC 7001]
gi|197626521|gb|EDY39080.1| RNA-binding protein RbpD [Cyanobium sp. PCC 7001]
Length = 119
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 37/59 (62%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
TIYV L +AE + + +F +YG+V SLP + TG+ +GFAFVE + + KA++
Sbjct: 2 TIYVGNLSFQAEREDLLDLFGQYGEVRQCSLPLDRETGRKRGFAFVELANDADEQKAID 60
>gi|68069097|ref|XP_676459.1| eukaryotic translation initiation factor [Plasmodium berghei strain
ANKA]
gi|56496167|emb|CAH98794.1| eukaryotic translation initiation factor, putative [Plasmodium
berghei]
Length = 266
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 37/61 (60%)
Query: 196 ECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKAL 255
ECTI V L + + ++F + G+++ + L K K T KGFAF+ +S +EEA +A+
Sbjct: 184 ECTIRVTNLSEDVNESELSNLFGRVGQISRMFLAKHKETQNSKGFAFITYSKREEAKRAI 243
Query: 256 E 256
E
Sbjct: 244 E 244
>gi|325187900|emb|CCA22444.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 521
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 66/145 (45%), Gaps = 6/145 (4%)
Query: 109 LYQQIMNLMEFYLSDSNLRKDRFFSQ--LLQESPEIEVSVFLKCNKLARLTHDPDDVVKA 166
L Q+ +EFY SDSN R+DRF + Q+ I SV KL LT DP + K+
Sbjct: 8 LEAQVKRQVEFYFSDSNFRRDRFLKEETTKQQDGFIPFSVLFTFKKLQALTTDPAVLQKS 67
Query: 167 LRKSKLLEVTEDGTKVRRTVVVQDKPDVDECT-IYVEKLPPEAEHDYIESVFSKYGKVT- 224
+ S LLE+ E +RR + + D E T ++V D I+ F K KVT
Sbjct: 68 IENSDLLEMNESKDALRRKSPLPEVDDSPERTLVFVGLGAVMPTIDEIKKSFEKM-KVTP 126
Query: 225 -YVSLPKFKSTGKLKGFAFVEFSTK 248
Y+S G VEF TK
Sbjct: 127 LYISRNNASFERFRNGMVQVEFETK 151
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 1 MEFYLSDSNLRKDRFFSQ--LLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
+EFY SDSN R+DRF + Q+ I SV KL LT DP + K++ S LLE
Sbjct: 16 VEFYFSDSNFRRDRFLKEETTKQQDGFIPFSVLFTFKKLQALTTDPAVLQKSIENSDLLE 75
Query: 59 VTE 61
+ E
Sbjct: 76 MNE 78
>gi|341896374|gb|EGT52309.1| CBN-EIF-3.G protein [Caenorhabditis brenneri]
Length = 262
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 38/66 (57%)
Query: 190 DKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKE 249
D+ DE T V LP E D + VF K G+V + + + K T KGFAFV F +++
Sbjct: 175 DRNRSDENTCRVTNLPQEMNEDELRDVFGKIGRVIRIFIARDKITALPKGFAFVTFESRD 234
Query: 250 EAAKAL 255
+AA+A+
Sbjct: 235 DAARAI 240
>gi|313234383|emb|CBY24582.1| unnamed protein product [Oikopleura dioica]
Length = 220
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 183 RRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAF 242
R+ QD+P+ C I V +P + + +E +FS +G++ +V +PK TGK +GFAF
Sbjct: 95 RQEAKNQDQPE-GSCKIMVRNVPFQCQVPELEQLFSTFGELKFVRMPK-NPTGKHRGFAF 152
Query: 243 VEFSTKEEAAKALE 256
VEF +A+ A +
Sbjct: 153 VEFKLAADASSAFK 166
>gi|315047680|ref|XP_003173215.1| U4/U6 snRNA-associated-splicing factor PRP24 [Arthroderma gypseum
CBS 118893]
gi|311343601|gb|EFR02804.1| U4/U6 snRNA-associated-splicing factor PRP24 [Arthroderma gypseum
CBS 118893]
Length = 1329
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 64/131 (48%), Gaps = 13/131 (9%)
Query: 135 LLQESPEIEVSVFLK-CNKLARLTHDPDDVVKALRKSKLLEVTED----GTKVRRTV--- 186
L ++ P++++ F + C KL L P D AL + + ED GTK +R +
Sbjct: 855 LPKDIPQVKIRQFFRDCGKLNSLQMLPGDSGSALLE---FDTHEDALAAGTKNQRLLEGS 911
Query: 187 VVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFS 246
V +P V + TI+V PP A+ +YI +F YG++ V P K + F +V+F+
Sbjct: 912 KVTVEP-VTDTTIFVTNFPPTADENYIRELFHSYGEIAEVRFPSLKYNTHRR-FCYVQFT 969
Query: 247 TKEEAAKALEL 257
+ A A L
Sbjct: 970 SSSSAYAATGL 980
Score = 44.3 bits (103), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 199 IYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALEL 257
IYV +P + + +F+ YG V V +P K G+ +GFAFV F+TK+++ AL L
Sbjct: 1014 IYVCNIPYKTTEGDLVELFTAYGDVESVRIPT-KVNGETRGFAFVSFATKDQSTAALAL 1071
>gi|302658078|ref|XP_003020748.1| hypothetical protein TRV_05156 [Trichophyton verrucosum HKI 0517]
gi|291184608|gb|EFE40130.1| hypothetical protein TRV_05156 [Trichophyton verrucosum HKI 0517]
Length = 441
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 79/169 (46%), Gaps = 24/169 (14%)
Query: 114 MNLMEFYLSDSNLRKDRFFSQLL--QESPEIEVSVFLKCNKLARLTHDP-DDVVKALRKS 170
+ +EFY SDSNL D+F + E+ +E+S+ ++ R P +V+AL+ S
Sbjct: 137 LGQVEFYFSDSNLPMDKFLLSKVGGSENRPVELSLLHSFKRMRRFQ--PFSAIVEALKGS 194
Query: 171 KLLEVTEDGTKVRRTV----VVQDKPDVDECTIYVEKL-----------PPEAEHDY-IE 214
+L+E+ +D VRR V +++ D I+ +K P E + IE
Sbjct: 195 ELVELVDDDKAVRRKVPLPDTIKETADASAVKIFEDKAMHRSIYAKGFGPEEPSTQFDIE 254
Query: 215 SVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNPCP 263
+ F+ YG V L + KG FVEF T E+ KA L + P P
Sbjct: 255 AFFTPYGPTNAVRLRRAMDK-TFKGSVFVEFET-EDLQKAF-LAIEPKP 300
>gi|164657762|ref|XP_001730007.1| hypothetical protein MGL_2993 [Malassezia globosa CBS 7966]
gi|159103901|gb|EDP42793.1| hypothetical protein MGL_2993 [Malassezia globosa CBS 7966]
Length = 638
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 6/75 (8%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE- 256
T+++ L D I + F+++G+VT V LPK +G+ KGF +VEF +++ AAKALE
Sbjct: 496 TLFIGGLAWALTEDDIWNAFAEFGEVTGVRLPKEIDSGRPKGFGYVEFVSQDNAAKALET 555
Query: 257 -----LGLNPCPPDY 266
LG P D+
Sbjct: 556 MNGQALGGRPIRIDF 570
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 36/57 (63%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKA 254
T++V +L ++D+++S F +YG V + + +G+ +GF +V+F+T EA +A
Sbjct: 395 TLWVGQLSWNVDNDWLKSEFEQYGTVLDARVQCDRDSGRSRGFGYVDFATSAEALRA 451
>gi|120610816|ref|YP_970494.1| RNP-1-like RNA-binding protein [Acidovorax citrulli AAC00-1]
gi|120589280|gb|ABM32720.1| RNP-1-like RNA-binding protein [Acidovorax citrulli AAC00-1]
Length = 116
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 197 CTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
C IYV LP + + S F+++G VT + + TG+ KGF FVE S+ E+A A+
Sbjct: 3 CKIYVGNLPYSVTDESLRSNFAEFGGVTSSKIMTDRETGRSKGFGFVEMSSAEDAQSAI- 61
Query: 257 LGLNPCPPDYQSSIL 271
GLN D +S ++
Sbjct: 62 TGLNGLSVDGRSIVV 76
>gi|434399674|ref|YP_007133678.1| RNP-1 like RNA-binding protein [Stanieria cyanosphaera PCC 7437]
gi|428270771|gb|AFZ36712.1| RNP-1 like RNA-binding protein [Stanieria cyanosphaera PCC 7437]
Length = 94
Score = 51.2 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 35/58 (60%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKAL 255
+IYV L E +E VF++YG V V LP + TG+ +GFAFVE T+ E A A+
Sbjct: 2 SIYVGNLDYEISQQDLEEVFTEYGTVKRVHLPTDRETGRKRGFAFVEMGTEAEEASAI 59
>gi|52840506|ref|YP_094305.1| RNA binding protein, cold-inducible rrm [Legionella pneumophila
subsp. pneumophila str. Philadelphia 1]
gi|52627617|gb|AAU26358.1| RNA binding protein, cold-inducible rrm [Legionella pneumophila
subsp. pneumophila str. Philadelphia 1]
Length = 92
Score = 51.2 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 38/63 (60%)
Query: 199 IYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELG 258
IYV LP + + FS+YGK+ + L K + TG++KGF F+ FS ++EA ALE+
Sbjct: 7 IYVGNLPFGTTEEALSIQFSQYGKIEEMFLIKDRLTGQMKGFGFITFSAQQEAESALEMN 66
Query: 259 LNP 261
P
Sbjct: 67 GQP 69
>gi|87124729|ref|ZP_01080577.1| RNA-binding protein RbpD [Synechococcus sp. RS9917]
gi|86167608|gb|EAQ68867.1| RNA-binding protein RbpD [Synechococcus sp. RS9917]
Length = 112
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 38/60 (63%)
Query: 197 CTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
TIY+ L +AE + + +F++YG+V SLP + TG+ +GFAFVE + + KA++
Sbjct: 1 MTIYIGNLSFQAEQEDLLDLFNQYGEVKSASLPLDRETGRKRGFAFVEMNNDSDEQKAID 60
>gi|397570464|gb|EJK47313.1| hypothetical protein THAOC_33975 [Thalassiosira oceanica]
Length = 384
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 43/68 (63%)
Query: 189 QDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTK 248
+D D D+ T+ V + EA ++ +FS +G+++ V L K K T + +GFAFV F +
Sbjct: 257 RDNRDRDQNTLRVTNISEEASEADLQDLFSPFGRISRVYLAKDKETMQSRGFAFVSFVHR 316
Query: 249 EEAAKALE 256
E+AA+A++
Sbjct: 317 EDAARAMD 324
>gi|380028007|ref|XP_003697703.1| PREDICTED: uncharacterized protein LOC100872910 [Apis florea]
Length = 861
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 70/148 (47%), Gaps = 13/148 (8%)
Query: 107 KQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKA 166
+QL Q + + +E+Y S NL D + + + + N++ +LT D + +
Sbjct: 215 EQLKQMLSSQLEYYFSRENLANDTYLLSQMDNDQYVPIWTVANFNQVKKLTKDIKLITEV 274
Query: 167 LRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYV 226
LR+S ++V E+G KVR P+ C + + ++P + ++++FS G ++
Sbjct: 275 LRESPNVQVDEEGQKVR--------PNHKRCIVILREIPDSTPLEDVKNLFSGEGCPRFI 326
Query: 227 SLPKFKSTGKLKGFAFVEFSTKEEAAKA 254
S +F +V F + E+A KA
Sbjct: 327 SC-EFAHNSSW----YVTFESDEDAQKA 349
Score = 38.1 bits (87), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 38/76 (50%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEVT 60
+E+Y S NL D + + + + N++ +LT D + + LR+S ++V
Sbjct: 225 LEYYFSRENLANDTYLLSQMDNDQYVPIWTVANFNQVKKLTKDIKLITEVLRESPNVQVD 284
Query: 61 EDGTKVKGNIIRHFLV 76
E+G KV+ N R ++
Sbjct: 285 EEGQKVRPNHKRCIVI 300
>gi|148358462|ref|YP_001249669.1| RNA binding protein [Legionella pneumophila str. Corby]
gi|296105810|ref|YP_003617510.1| RNA binding protein, cold-inducible rrm [Legionella pneumophila
2300/99 Alcoy]
gi|397665933|ref|YP_006507470.1| Cold-inducible RNA-binding protein (Glycine-rich RNA-binding
protein CIRP) (A18 hnRNP) [Legionella pneumophila subsp.
pneumophila]
gi|148280235|gb|ABQ54323.1| RNA binding protein, cold-inducible rrm [Legionella pneumophila
str. Corby]
gi|295647711|gb|ADG23558.1| RNA binding protein, cold-inducible rrm [Legionella pneumophila
2300/99 Alcoy]
gi|395129344|emb|CCD07574.1| Cold-inducible RNA-binding protein (Glycine-rich RNA-binding
protein CIRP) (A18 hnRNP) [Legionella pneumophila subsp.
pneumophila]
Length = 91
Score = 51.2 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 38/63 (60%)
Query: 199 IYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELG 258
IYV LP + + FS+YGK+ + L K + TG++KGF F+ FS ++EA ALE+
Sbjct: 6 IYVGNLPFGTTEEALSIQFSQYGKIEEMFLIKDRLTGQMKGFGFITFSAQQEAESALEMN 65
Query: 259 LNP 261
P
Sbjct: 66 GQP 68
>gi|68488829|ref|XP_711761.1| hypothetical protein CaO19.10313 [Candida albicans SC5314]
gi|46433084|gb|EAK92539.1| hypothetical protein CaO19.10313 [Candida albicans SC5314]
Length = 324
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 85/178 (47%), Gaps = 24/178 (13%)
Query: 111 QQIMNLMEFYLSDSNLRKDRFFSQLLQESPE-IEVSVFLKCNKLARLTHDPDDVVKALRK 169
+++ +EFY SDSNL+ D+F ++ + + +E+ L ++ R D V+ AL++
Sbjct: 13 EKVRKQVEFYFSDSNLQTDKFLWKIYESNDGWVELKTILTFGRM-RQYRPEDKVISALKE 71
Query: 170 SKLLEVTEDGTKVRRTVVVQDKPDVDEC----TIYVEKLPPEAEHDYIESVFSKYGKVTY 225
SK L ++ + +RR ++D +V TI++E P + D +E+ ++
Sbjct: 72 SKKLVLSANNDMIRRKDPIKDFNEVKNTRKRNTIHIEGFPKDLSQDDVENWVNEK---VI 128
Query: 226 VSLPK---------FKSTGKLKGFAFV--EFSTKEEAAKALELGLNPCPPDYQSSILT 272
V LPK KS K + F V EF T+E+A E LN Y I++
Sbjct: 129 VQLPKEKEVCSIRRIKSRAKKEFFGVVDIEFKTQEDA----EFILNNVELSYPEGIIS 182
>gi|443478888|ref|ZP_21068579.1| RNP-1 like RNA-binding protein [Pseudanabaena biceps PCC 7429]
gi|443015762|gb|ELS30586.1| RNP-1 like RNA-binding protein [Pseudanabaena biceps PCC 7429]
Length = 109
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 39/59 (66%)
Query: 197 CTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKAL 255
+IYV L E D +++VFS+YGK+T V LP + +G+ +GFAFVE + ++E A+
Sbjct: 1 MSIYVGNLSYEVTEDDLKAVFSEYGKITRVHLPIDRESGRPRGFAFVEMTEEKEEDAAI 59
>gi|340516569|gb|EGR46817.1| predicted protein [Trichoderma reesei QM6a]
Length = 1062
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 199 IYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKA 254
++V L P D + VFSKYG + V++P+ G+ +GFAFV F TK+EA KA
Sbjct: 761 VHVSGLNPSTSEDELRDVFSKYGTIQRVNIPR-SINGRGRGFAFVVFGTKDEAEKA 815
>gi|425442381|ref|ZP_18822630.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9717]
gi|389716645|emb|CCH99152.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9717]
Length = 98
Score = 51.2 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 37/58 (63%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKAL 255
+IYV LP E + + + VF +YG++ V LP + T + +GFAFVE T E+ AKA+
Sbjct: 2 SIYVGNLPFEVDQEDVVEVFKEYGEIKRVHLPMDRETKRKRGFAFVEMETPEQEAKAI 59
>gi|293332827|ref|NP_001169335.1| uncharacterized protein LOC100383202 [Zea mays]
gi|224028769|gb|ACN33460.1| unknown [Zea mays]
gi|413918115|gb|AFW58047.1| hypothetical protein ZEAMMB73_457780 [Zea mays]
Length = 714
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 40/65 (61%)
Query: 191 KPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEE 250
K D DE +Y+ LPP + D + S+FS++G + + K ++TG+ KG+ FV++S E
Sbjct: 414 KKDYDETNLYIGYLPPTMDDDGLVSLFSQFGDIVMAKVIKDRNTGQSKGYGFVKYSDVSE 473
Query: 251 AAKAL 255
A A+
Sbjct: 474 ANAAI 478
>gi|68488874|ref|XP_711737.1| hypothetical protein CaO19.2795 [Candida albicans SC5314]
gi|46433059|gb|EAK92515.1| hypothetical protein CaO19.2795 [Candida albicans SC5314]
Length = 324
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 85/178 (47%), Gaps = 24/178 (13%)
Query: 111 QQIMNLMEFYLSDSNLRKDRFFSQLLQESPE-IEVSVFLKCNKLARLTHDPDDVVKALRK 169
+++ +EFY SDSNL+ D+F ++ + + +E+ L ++ R D V+ AL++
Sbjct: 13 EKVRKQVEFYFSDSNLQTDKFLWKIYESNDGWVELKTILTFGRM-RQYRPEDKVISALKE 71
Query: 170 SKLLEVTEDGTKVRRTVVVQDKPDVDEC----TIYVEKLPPEAEHDYIESVFSKYGKVTY 225
SK L ++ + +RR ++D +V TI++E P + D +E+ ++
Sbjct: 72 SKKLVLSANNDMIRRKDPIKDFNEVKNTRKRNTIHIEGFPKDLSQDDVENWVNEK---VI 128
Query: 226 VSLPK---------FKSTGKLKGFAFV--EFSTKEEAAKALELGLNPCPPDYQSSILT 272
V LPK KS K + F V EF T+E+A E LN Y I++
Sbjct: 129 VQLPKEKEVCSIRRIKSRAKKEFFGVVDIEFKTQEDA----EFILNNVELSYPEGIIS 182
>gi|195396387|ref|XP_002056813.1| GJ16680 [Drosophila virilis]
gi|194146580|gb|EDW62299.1| GJ16680 [Drosophila virilis]
Length = 915
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 62/116 (53%), Gaps = 6/116 (5%)
Query: 143 EVSVFLKCNKLARLTHDPDDVVKALRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVE 202
+ SV + K +LT ++V+ R ++L+ +DG RR V Q K I V
Sbjct: 734 KASVAAQALKDMQLTQIDGNLVELKRSDRVLKTQDDG--ARRRQVAQKKQT--GTKILVR 789
Query: 203 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGK--LKGFAFVEFSTKEEAAKALE 256
+P +A + + +F +G++T + LPK + G+ +GF FV+F+TK +A +A +
Sbjct: 790 NIPFQAHYREVRDIFKAFGELTSLRLPKKMTPGEDAHRGFGFVDFTTKADAKRAFD 845
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 199 IYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELG 258
I V++LP + D + ++F G +T + L K+ GK + F FV +S++ EA A++
Sbjct: 4 IIVKQLPKQISEDKLRNIFGTKGTITDLQL-KYTPDGKFRQFCFVGYSSEAEAQAAIKHF 62
Query: 259 LNPC 262
N C
Sbjct: 63 NNTC 66
>gi|383858676|ref|XP_003704825.1| PREDICTED: la-related protein 4-like [Megachile rotundata]
Length = 765
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 70/148 (47%), Gaps = 13/148 (8%)
Query: 107 KQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKA 166
+QL Q + + +E+Y S NL D + + + + N++ +LT D + +
Sbjct: 215 EQLKQMLSSQLEYYFSRENLANDTYLLSQMDNDQYVPIWTVANFNQVKKLTKDIKLITEV 274
Query: 167 LRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYV 226
LR+S ++V E+G KVR P+ C + + ++P + ++++FS G ++
Sbjct: 275 LRESPNVQVDEEGQKVR--------PNHKRCIVILREIPDNTPLEDVKNLFSGEGCPRFI 326
Query: 227 SLPKFKSTGKLKGFAFVEFSTKEEAAKA 254
S +F +V F + E+A KA
Sbjct: 327 SC-EFAHNSSW----YVTFESDEDAQKA 349
Score = 38.1 bits (87), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 38/76 (50%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEVT 60
+E+Y S NL D + + + + N++ +LT D + + LR+S ++V
Sbjct: 225 LEYYFSRENLANDTYLLSQMDNDQYVPIWTVANFNQVKKLTKDIKLITEVLRESPNVQVD 284
Query: 61 EDGTKVKGNIIRHFLV 76
E+G KV+ N R ++
Sbjct: 285 EEGQKVRPNHKRCIVI 300
>gi|56118378|ref|NP_001008144.1| La ribonucleoprotein domain family, member 6 [Xenopus (Silurana)
tropicalis]
gi|51703781|gb|AAH81356.1| La ribonucleoprotein domain family, member 6 [Xenopus (Silurana)
tropicalis]
Length = 487
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
Query: 108 QLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN--KLARLTHDPDDVVK 165
+L Q+++ +E+YLSD NL KD F + ++ + VSV L + K+ LT D
Sbjct: 92 ELIQKLITQIEYYLSDENLEKDAFLLKHVRRNKMGFVSVKLLTSFKKVKHLTRDWRTTAY 151
Query: 166 ALRKSKLLEVTEDGTKVRRTVVV 188
ALR S LLE+ ED K+RR V
Sbjct: 152 ALRYSNLLELNEDNRKIRRKTPV 174
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN--KLARLTHDPDDVVKALRKSKLLE 58
+E+YLSD NL KD F + ++ + VSV L + K+ LT D ALR S LLE
Sbjct: 101 IEYYLSDENLEKDAFLLKHVRRNKMGFVSVKLLTSFKKVKHLTRDWRTTAYALRYSNLLE 160
Query: 59 VTEDGTKVKGNIIRHFLVPI 78
+ ED K++ R VP+
Sbjct: 161 LNEDNRKIR----RKTPVPV 176
>gi|340517635|gb|EGR47878.1| predicted protein [Trichoderma reesei QM6a]
Length = 400
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 84/172 (48%), Gaps = 12/172 (6%)
Query: 111 QQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVF-LKCNKLARLTHDPDDVVKALRK 169
++I +EFY D N +D+F + S + + + K R VV ALR+
Sbjct: 139 EEIRKQVEFYFGDWNFPQDKFMWETCGGSENKPMPIATIHSFKRMRCFQPYSAVVAALRE 198
Query: 170 SKLLEVT-EDGTK-VRRTV----VVQDKPDVDECTIYVEKL---PPEAEHDYIESVFSKY 220
SK LEV+ E+G + V+R V + K + T+Y + P+ + + +E F+++
Sbjct: 199 SKFLEVSGEEGKEVVKRKVPYKPMTTSKAKAEAATVYAKGFGDEQPDTQFE-LEKFFAQF 257
Query: 221 GKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNPCPPDYQSSILT 272
G+V+ + L + + G KG FV F+ +E A K L L P D+ I++
Sbjct: 258 GEVSGLKL-RRTNEGLFKGSVFVTFADEETAKKFLALDPAPKWKDHDLKIMS 308
>gi|328781153|ref|XP_394951.3| PREDICTED: la-related protein 4-like [Apis mellifera]
Length = 763
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 70/148 (47%), Gaps = 13/148 (8%)
Query: 107 KQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKA 166
+QL Q + + +E+Y S NL D + + + + N++ +LT D + +
Sbjct: 215 EQLKQMLSSQLEYYFSRENLANDTYLLSQMDNDQYVPIWTVANFNQVKKLTKDIKLITEV 274
Query: 167 LRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYV 226
LR+S ++V E+G KVR P+ C + + ++P + ++++FS G ++
Sbjct: 275 LRESPNVQVDEEGQKVR--------PNHKRCIVILREIPDSTPLEDVKNLFSGEGCPRFI 326
Query: 227 SLPKFKSTGKLKGFAFVEFSTKEEAAKA 254
S +F +V F + E+A KA
Sbjct: 327 SC-EFAHNSSW----YVTFESDEDAQKA 349
Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 38/76 (50%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEVT 60
+E+Y S NL D + + + + N++ +LT D + + LR+S ++V
Sbjct: 225 LEYYFSRENLANDTYLLSQMDNDQYVPIWTVANFNQVKKLTKDIKLITEVLRESPNVQVD 284
Query: 61 EDGTKVKGNIIRHFLV 76
E+G KV+ N R ++
Sbjct: 285 EEGQKVRPNHKRCIVI 300
>gi|322698722|gb|EFY90490.1| poly(A) RNA binding protein [Metarhizium acridum CQMa 102]
Length = 742
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 197 CTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
IYV+ + EA D +F KYG +T SL + GK +GF FV F+T E AAKA+E
Sbjct: 241 TNIYVKNISTEASDDEFRELFEKYGDITSSSLAR-DQEGKSRGFGFVNFTTHESAAKAVE 299
>gi|254414476|ref|ZP_05028242.1| RNA-binding protein, putative [Coleofasciculus chthonoplastes PCC
7420]
gi|196178706|gb|EDX73704.1| RNA-binding protein, putative [Coleofasciculus chthonoplastes PCC
7420]
Length = 96
Score = 51.2 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 37/58 (63%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKAL 255
TIY+ L +A D +++VF+ YG V V LP + TG+++GFAFVE + + + A+
Sbjct: 2 TIYIGNLSYQATEDDLQTVFADYGTVKRVVLPTDRETGRVRGFAFVEMTDEAQEESAI 59
>gi|119488026|ref|ZP_01621470.1| RNA-binding region protein [Lyngbya sp. PCC 8106]
gi|119455315|gb|EAW36454.1| RNA-binding region protein [Lyngbya sp. PCC 8106]
Length = 100
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 37/59 (62%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
+IYV L E + ++SVF++YG V VS+P + TG+ +GFAFVE + E A+E
Sbjct: 2 SIYVGNLAYEVTEEDLKSVFAEYGAVQRVSIPTDRETGRPRGFAFVEMGAESEEDAAIE 60
>gi|154322853|ref|XP_001560741.1| hypothetical protein BC1G_00769 [Botryotinia fuckeliana B05.10]
gi|347837080|emb|CCD51652.1| similar to polyadenylate-binding protein [Botryotinia fuckeliana]
Length = 790
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 34/60 (56%)
Query: 197 CTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
IYV+ +P EA + +F K+G VT SL + TGK +GF FV F E AA A++
Sbjct: 242 TNIYVKNIPVEATEEEFRELFEKFGDVTSASLARDAETGKSRGFGFVNFINHEHAATAVD 301
>gi|256076749|ref|XP_002574672.1| serine/arginine rich splicing factor [Schistosoma mansoni]
gi|360045341|emb|CCD82889.1| putative serine/arginine rich splicing factor [Schistosoma mansoni]
Length = 210
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKA 254
++Y+ LP HD + F +YG++ V++P TG++KG+AF+EF +A A
Sbjct: 7 SLYIRHLPDTCRHDDLRRCFGRYGRIVDVTIPLDFFTGRMKGYAFIEFENPRDAEDA 63
>gi|331228813|ref|XP_003327073.1| hypothetical protein PGTG_08850 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309306063|gb|EFP82654.1| hypothetical protein PGTG_08850 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 637
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%)
Query: 194 VDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAK 253
+ T++V LP A D + +F++YG V V LP T ++KGF +VEF+T E A
Sbjct: 456 AESTTLFVGNLPFSATQDSVWEIFAEYGDVNSVRLPTDPETQRVKGFGYVEFATLESARA 515
Query: 254 ALELG 258
A+E G
Sbjct: 516 AVEKG 520
>gi|195448364|ref|XP_002071625.1| GK25043 [Drosophila willistoni]
gi|194167710|gb|EDW82611.1| GK25043 [Drosophila willistoni]
Length = 172
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 97 RKDGGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESP 140
+KD GGR RK+ Y I + MEFY+ D+NL KDRF + +++ P
Sbjct: 20 KKDDGGRKRKRHFYNAIRSQMEFYIGDANLSKDRFLRRHVEQDP 63
>gi|226476572|emb|CAX72178.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226476574|emb|CAX72179.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
Length = 125
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKA 254
++Y+ LP HD + F +YG++ V++P TG++KG+AF+EF +A A
Sbjct: 7 SLYIRHLPDTCRHDDLRRCFGRYGRIVDVTIPLDFFTGRMKGYAFIEFENPRDAEDA 63
>gi|209528246|ref|ZP_03276711.1| RNP-1 like RNA-binding protein [Arthrospira maxima CS-328]
gi|376004999|ref|ZP_09782569.1| Glycine-rich RNA-binding protein, rbp-like [Arthrospira sp. PCC
8005]
gi|423065550|ref|ZP_17054340.1| RNP-1 like RNA-binding protein [Arthrospira platensis C1]
gi|209491318|gb|EDZ91708.1| RNP-1 like RNA-binding protein [Arthrospira maxima CS-328]
gi|375326593|emb|CCE18322.1| Glycine-rich RNA-binding protein, rbp-like [Arthrospira sp. PCC
8005]
gi|406712993|gb|EKD08168.1| RNP-1 like RNA-binding protein [Arthrospira platensis C1]
Length = 100
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALEL 257
+IYV L E + + +VF++YG V V LP + TG+++GF FVE T+ E A++
Sbjct: 2 SIYVGNLSYEVTEEDLTAVFAEYGAVKRVKLPTDRETGRMRGFGFVEMDTEAEEQSAIDA 61
Query: 258 --GLNPCPPD 265
G C D
Sbjct: 62 LDGAEWCGRD 71
>gi|326525645|dbj|BAJ88869.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 351
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 68/158 (43%), Gaps = 20/158 (12%)
Query: 118 EFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEV 175
E+Y SD NL + + + PE + +SV K+ L + ALR S L V
Sbjct: 1 EYYFSDINLATTEHLMRFITKDPEGYVPMSVVASFKKIKALVQSSSMLASALRTSSKLVV 60
Query: 176 TEDGTKVRR--TVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYV------- 226
+EDG +V+R D ++ + E LP + + + +FS G V +
Sbjct: 61 SEDGNRVKRGQPFTESDLEELQSRIVVAENLPDDHCYQNLMKIFSSAGSVKTIRTCYPQT 120
Query: 227 ---SLPKFKSTGKL------KGFAFVEFSTKEEAAKAL 255
S P + KL K AFVE+ T E+A KA+
Sbjct: 121 PNGSGPVTNRSAKLDMLFANKLHAFVEYETVEDAEKAI 158
Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Query: 2 EFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEV 59
E+Y SD NL + + + PE + +SV K+ L + ALR S L V
Sbjct: 1 EYYFSDINLATTEHLMRFITKDPEGYVPMSVVASFKKIKALVQSSSMLASALRTSSKLVV 60
Query: 60 TEDGTKVK 67
+EDG +VK
Sbjct: 61 SEDGNRVK 68
>gi|291383147|ref|XP_002708097.1| PREDICTED: ELAV-like 2-like isoform 2 [Oryctolagus cuniculus]
Length = 376
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 165 KALRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVT 224
+A R S+ +T DG + + P C I+V L P+A+ + +F +G VT
Sbjct: 262 QAQRFSRFSPMTIDGMTSLAGINIPGHPGTGWC-IFVYNLAPDADESILWQMFGPFGAVT 320
Query: 225 YVSLPKFKSTGKLKGFAFVEFSTKEEAAKAL 255
V + + +T K KGF FV + +EAA A+
Sbjct: 321 NVKVIRDFNTNKCKGFGFVTMTNYDEAAMAI 351
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 159 DPDDVVKALRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFS 218
DP D KA+ L + KV + + + +YV LP +E +FS
Sbjct: 118 DPKDAEKAINTLNGLRLQTKTIKV--SYARPSSASIRDANLYVSGLPKTMTQKELEQLFS 175
Query: 219 KYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLN 260
+YG++ + + TG +G F+ F + EA +A++ GLN
Sbjct: 176 QYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIK-GLN 216
>gi|29841102|gb|AAP06115.1| similar to NM_080743 serine-arginine repressor protein (35 kDa) in
Homo sapiens [Schistosoma japonicum]
gi|226476576|emb|CAX72180.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481266|emb|CAX79098.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481268|emb|CAX79099.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481270|emb|CAX79100.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481274|emb|CAX79102.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481276|emb|CAX79103.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481278|emb|CAX79104.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481280|emb|CAX79105.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481282|emb|CAX79106.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481284|emb|CAX79107.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481286|emb|CAX79108.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481288|emb|CAX79109.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481292|emb|CAX79111.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481294|emb|CAX79112.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481300|emb|CAX79114.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481699|emb|CAX79115.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481701|emb|CAX79116.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
Length = 210
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKA 254
++Y+ LP HD + F +YG++ V++P TG++KG+AF+EF +A A
Sbjct: 7 SLYIRHLPDTCRHDDLRRCFGRYGRIVDVTIPLDFFTGRMKGYAFIEFENPRDAEDA 63
>gi|350401767|ref|XP_003486255.1| PREDICTED: hypothetical protein LOC100743128 [Bombus impatiens]
Length = 762
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 70/148 (47%), Gaps = 13/148 (8%)
Query: 107 KQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKA 166
+QL Q + + +E+Y S NL D + + + + N++ +LT D + +
Sbjct: 112 EQLKQMLSSQLEYYFSRENLANDTYLLSQMDNDQYVPIWTVANFNQVKKLTKDIKLITEV 171
Query: 167 LRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYV 226
LR+S ++V E+G KVR P+ C + + ++P + ++++FS G ++
Sbjct: 172 LRESPNVQVDEEGQKVR--------PNHKRCIVILREIPDNTPLEDVKNLFSGEGCPRFI 223
Query: 227 SLPKFKSTGKLKGFAFVEFSTKEEAAKA 254
S +F +V F + E+A KA
Sbjct: 224 SC-EFAHNSSW----YVTFESDEDAQKA 246
Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 38/76 (50%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEVT 60
+E+Y S NL D + + + + N++ +LT D + + LR+S ++V
Sbjct: 122 LEYYFSRENLANDTYLLSQMDNDQYVPIWTVANFNQVKKLTKDIKLITEVLRESPNVQVD 181
Query: 61 EDGTKVKGNIIRHFLV 76
E+G KV+ N R ++
Sbjct: 182 EEGQKVRPNHKRCIVI 197
>gi|218441262|ref|YP_002379591.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7424]
gi|218173990|gb|ACK72723.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7424]
Length = 97
Score = 51.2 bits (121), Expect = 6e-04, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 35/58 (60%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKAL 255
+IYV L E E ++ +FS YGKVT V +P + TG+ +GFAFVE T + A+
Sbjct: 2 SIYVGNLAFEVEDKHLSDIFSDYGKVTRVYMPTDRETGQRRGFAFVEMETPQMEDAAI 59
>gi|339243057|ref|XP_003377454.1| la protein-like protein [Trichinella spiralis]
gi|316973742|gb|EFV57301.1| la protein-like protein [Trichinella spiralis]
Length = 517
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 70/154 (45%), Gaps = 16/154 (10%)
Query: 112 QIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALR--K 169
+I ME+Y + NL D+F +++ I + F+ N++ LT+D VV AL+ +
Sbjct: 107 KIRKQMEYYFCNDNLCTDKFLRAEMEKDSGIPLETFMTFNRIKALTNDVAVVVAALKEAE 166
Query: 170 SKLLEV-----TEDGTKVRRTVVVQDKPDVD-------ECTIYVEKLPPEAEHDYIESVF 217
S LEV T+D +RR + PD D E T V+K P D +E F
Sbjct: 167 SDFLEVSKVTMTDDQLNIRRKLSFP-VPDWDAFIASRAERTAVVKKFPLNVTLDKLEEFF 225
Query: 218 SKYGKVTYVSLPKFKSTGK-LKGFAFVEFSTKEE 250
GK+ + + K + G FV FS EE
Sbjct: 226 HPLGKIESIRMIYKKDQSRSFTGTVFVIFSDVEE 259
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALR--KSKLLE 58
ME+Y + NL D+F +++ I + F+ N++ LT+D VV AL+ +S LE
Sbjct: 112 MEYYFCNDNLCTDKFLRAEMEKDSGIPLETFMTFNRIKALTNDVAVVVAALKEAESDFLE 171
Query: 59 VTE-DGTKVKGNIIRHFLVPI 78
V++ T + NI R P+
Sbjct: 172 VSKVTMTDDQLNIRRKLSFPV 192
>gi|270159743|ref|ZP_06188399.1| RNA binding protein [Legionella longbeachae D-4968]
gi|289165486|ref|YP_003455624.1| hypothetical protein LLO_2158 [Legionella longbeachae NSW150]
gi|269988082|gb|EEZ94337.1| RNA binding protein [Legionella longbeachae D-4968]
gi|288858659|emb|CBJ12554.1| putative N-terminal part of eukaryotic RNA-binding protein
precursor [Legionella longbeachae NSW150]
Length = 90
Score = 51.2 bits (121), Expect = 6e-04, Method: Composition-based stats.
Identities = 26/59 (44%), Positives = 38/59 (64%)
Query: 199 IYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALEL 257
IYV LP +++ FSKYGKV + L K + TG +KGF F+ FST++EA +L++
Sbjct: 6 IYVGNLPFGITEAALQAEFSKYGKVEELLLIKDRFTGHVKGFGFITFSTQQEAESSLKM 64
>gi|226481703|emb|CAX79117.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
Length = 115
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKA 254
++Y+ LP HD + F +YG++ V++P TG++KG+AF+EF +A A
Sbjct: 7 SLYIRHLPDTCRHDDLRRCFGRYGRIVDVTIPLDFFTGRMKGYAFIEFENPRDAEDA 63
>gi|431894746|gb|ELK04539.1| MKI67 FHA domain-interacting nucleolar phosphoprotein [Pteropus
alecto]
Length = 298
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Query: 180 TKVRRTVVVQDKPDVDECT---IYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGK 236
+VRR Q K + ++ T +YV LPP I + FS++G VT L + K TG
Sbjct: 27 AQVRRRATKQQKQEKEKLTRGVVYVGHLPPALYETQIRAYFSQFGTVTRFRLSRSKRTGN 86
Query: 237 LKGFAFVEFSTKEEAAKALELGLN 260
+G+AF+EF + E+ AK + +N
Sbjct: 87 SRGYAFIEFES-EDVAKIVAETMN 109
>gi|428183859|gb|EKX52716.1| hypothetical protein GUITHDRAFT_65055, partial [Guillardia theta
CCMP2712]
Length = 100
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 177 EDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPK--FKST 234
E+G+KV R V + P VD T++V LPP E + I S+ G + V + + T
Sbjct: 2 EEGSKVTRGTVGRSAP-VDCRTVFVYNLPPGTEEEEIRSLLEGCGNIQGVRINQTAISRT 60
Query: 235 GKLKGFAFVEFSTKEEAAKALEL 257
G FA V+F T E+A +A+EL
Sbjct: 61 GIPSSFAHVDFETHEQALRAIEL 83
>gi|354564693|ref|ZP_08983869.1| RNP-1 like RNA-binding protein [Fischerella sp. JSC-11]
gi|353549819|gb|EHC19258.1| RNP-1 like RNA-binding protein [Fischerella sp. JSC-11]
Length = 103
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 33/51 (64%)
Query: 197 CTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFST 247
+IYV L E E D ++ VFS+YG V V LP + TG+++GFAFVE +
Sbjct: 1 MSIYVGNLSYEVEQDDLKQVFSEYGTVKSVQLPVDRETGRVRGFAFVEMGS 51
>gi|260943682|ref|XP_002616139.1| hypothetical protein CLUG_03380 [Clavispora lusitaniae ATCC 42720]
gi|238849788|gb|EEQ39252.1| hypothetical protein CLUG_03380 [Clavispora lusitaniae ATCC 42720]
Length = 134
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Query: 178 DGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKL 237
+ V R V+ P ++V L PEA D + + FSKY ++ S+P K TGK
Sbjct: 36 SASSVARAPAVKWNPK--HFRLFVGNLGPEATEDVLLAAFSKYSSLSKASVPLDKKTGKN 93
Query: 238 KGFAFVEFSTKEEAAKALE 256
KGF FV F+T E+ KA +
Sbjct: 94 KGFGFVSFATSEDYLKAFK 112
>gi|226476570|emb|CAX72177.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481290|emb|CAX79110.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481296|emb|CAX79113.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
Length = 210
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKA 254
++Y+ LP HD + F +YG++ V++P TG++KG+AF+EF +A A
Sbjct: 7 SLYIRHLPDTCRHDDLRRCFGRYGRIVDVTIPLDFFTGRMKGYAFIEFENPRDAEDA 63
>gi|426233865|ref|XP_004010930.1| PREDICTED: la-related protein 6 [Ovis aries]
Length = 639
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 57/118 (48%), Gaps = 8/118 (6%)
Query: 73 HFLVPISMETEASDNVDKDLSDLQRKDGGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFF 132
H + T +N DL + GG +L +++++ +EFY SD NL KD F
Sbjct: 209 HLVGARGATTSGGENERDDLEQEWQPPGG------ELIKKLVDQIEFYFSDENLEKDAFL 262
Query: 133 SQLLQESPEIEVSVFLKCN--KLARLTHDPDDVVKALRKSKLLEVTEDGTKVRRTVVV 188
+ ++ + VSV L + K+ LT D AL+ S LE+ ED KVRRT V
Sbjct: 263 LKHVRRNKLGYVSVKLLTSFKKVKHLTRDWRTTAHALKYSVTLELNEDHRKVRRTTPV 320
Score = 37.7 bits (86), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN--KLARLTHDPDDVVKALRKSKLLE 58
+EFY SD NL KD F + ++ + VSV L + K+ LT D AL+ S LE
Sbjct: 247 IEFYFSDENLEKDAFLLKHVRRNKLGYVSVKLLTSFKKVKHLTRDWRTTAHALKYSVTLE 306
Query: 59 VTEDGTKVK 67
+ ED KV+
Sbjct: 307 LNEDHRKVR 315
>gi|428320431|ref|YP_007118313.1| RNP-1 like RNA-binding protein [Oscillatoria nigro-viridis PCC
7112]
gi|428244111|gb|AFZ09897.1| RNP-1 like RNA-binding protein [Oscillatoria nigro-viridis PCC
7112]
Length = 102
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 31/51 (60%)
Query: 197 CTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFST 247
+IYV L E +++ F +YG V V LP + TG+++GFAFVE ST
Sbjct: 1 MSIYVGNLSYEVTQEHLNQTFGEYGTVKRVQLPADRETGRMRGFAFVEMST 51
>gi|218439795|ref|YP_002378124.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7424]
gi|218172523|gb|ACK71256.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7424]
Length = 97
Score = 50.8 bits (120), Expect = 6e-04, Method: Composition-based stats.
Identities = 24/46 (52%), Positives = 30/46 (65%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFV 243
+IYV LP E E ++ VF+ YGKV V LP + TGK +GFAFV
Sbjct: 2 SIYVGNLPHEVEDKHLTEVFADYGKVNRVYLPTDRETGKRRGFAFV 47
>gi|254410375|ref|ZP_05024154.1| RNA-binding protein [Coleofasciculus chthonoplastes PCC 7420]
gi|196182581|gb|EDX77566.1| RNA-binding protein [Coleofasciculus chthonoplastes PCC 7420]
Length = 103
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 38/60 (63%)
Query: 197 CTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
+IY+ L +A + I S+F++YG V V LP + TG+++GF FVE ++ E + A++
Sbjct: 1 MSIYIGNLSYDATEEDITSIFAEYGTVKRVQLPTDRETGRMRGFGFVEMDSEAEESAAID 60
>gi|410968509|ref|XP_004001662.1| PREDICTED: LOW QUALITY PROTEIN: MKI67 FHA domain-interacting
nucleolar phosphoprotein [Felis catus]
Length = 274
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 183 RRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAF 242
RR ++K + IYV LPP I + FS++G VT L + K TG KG+AF
Sbjct: 31 RRATQRKEKEKLTPGVIYVGHLPPALYETQIRAYFSQFGTVTRFRLSRSKRTGNSKGYAF 90
Query: 243 VEFSTKEEAAKALELGLN 260
VEF++ E+ AK + +N
Sbjct: 91 VEFAS-EDVAKIVGETMN 107
>gi|345495153|ref|XP_001603906.2| PREDICTED: hypothetical protein LOC100120245 [Nasonia vitripennis]
Length = 775
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 69/147 (46%), Gaps = 13/147 (8%)
Query: 108 QLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKAL 167
QL Q + + +E+Y S NL D + + + + N++ +LT D + + L
Sbjct: 212 QLKQMLSSQLEYYFSRENLANDAYLLSQMDNDQYVPIWTVANFNQVKKLTTDIKLITEVL 271
Query: 168 RKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVS 227
R+S ++V E+G KVR P+ C + + ++P + ++++FS G ++S
Sbjct: 272 RESPNVQVDEEGQKVR--------PNHKRCIVILREIPDSTPLEDVKNLFSGEGCPRFIS 323
Query: 228 LPKFKSTGKLKGFAFVEFSTKEEAAKA 254
+F +V F + E+A KA
Sbjct: 324 C-EFAHNSSW----YVTFESDEDAQKA 345
Score = 38.1 bits (87), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 38/76 (50%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEVT 60
+E+Y S NL D + + + + N++ +LT D + + LR+S ++V
Sbjct: 221 LEYYFSRENLANDAYLLSQMDNDQYVPIWTVANFNQVKKLTTDIKLITEVLRESPNVQVD 280
Query: 61 EDGTKVKGNIIRHFLV 76
E+G KV+ N R ++
Sbjct: 281 EEGQKVRPNHKRCIVI 296
>gi|322711066|gb|EFZ02640.1| poly(A) RNA binding protein [Metarhizium anisopliae ARSEF 23]
Length = 743
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 197 CTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
IY++ + EA D +F KYG +T SL + GK +GF FV F+T E AAKA+E
Sbjct: 242 TNIYIKNISTEASDDEFRELFEKYGDITSSSLAR-DQEGKSRGFGFVNFTTHESAAKAVE 300
>gi|320168309|gb|EFW45208.1| RNA binding domain-containing protein [Capsaspora owczarzaki ATCC
30864]
Length = 1179
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 180 TKVRRTVVVQDKPDVDECT-IYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLK 238
T+ +R+ + +V E T + V +P EA + VFS +G++ V LP+ K G+ +
Sbjct: 1045 TRSKRSAASAAEAEVPESTKLIVRNVPFEATRKELFDVFSPFGQLKSVRLPQ-KPGGQHR 1103
Query: 239 GFAFVEFSTKEEAAKALE 256
GFAF+EF TKEEA KA E
Sbjct: 1104 GFAFIEFLTKEEAKKAFE 1121
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%)
Query: 199 IYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKAL 255
++V LP D + ++FSK+G++ V +P K T K GFAFV F E A A
Sbjct: 609 LFVRNLPYTCTEDDLIALFSKFGQLAEVHMPIDKETKKPTGFAFVLFLMPEHAVTAF 665
>gi|440634550|gb|ELR04469.1| hypothetical protein GMDG_06775 [Geomyces destructans 20631-21]
Length = 294
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 38/60 (63%)
Query: 195 DECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKA 254
D T+ V + AE D + ++F ++G VT V L K + TG KGFAF+ F+ +++AAKA
Sbjct: 212 DLATLRVTNVSELAEEDELRAMFQRFGHVTRVFLAKDRETGMAKGFAFISFTNRDDAAKA 271
>gi|226481705|emb|CAX79118.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
Length = 210
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKA 254
++Y+ LP HD + F +YG++ V++P TG++KG+AF+EF +A A
Sbjct: 7 SLYIRHLPDTCRHDDLRRCFGRYGRIVDVTIPLDFFTGRMKGYAFIEFENPRDAEDA 63
>gi|448123237|ref|XP_004204643.1| Piso0_000503 [Millerozyma farinosa CBS 7064]
gi|448125519|ref|XP_004205201.1| Piso0_000503 [Millerozyma farinosa CBS 7064]
gi|358249834|emb|CCE72900.1| Piso0_000503 [Millerozyma farinosa CBS 7064]
gi|358350182|emb|CCE73461.1| Piso0_000503 [Millerozyma farinosa CBS 7064]
Length = 505
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%)
Query: 184 RTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFV 243
R D P T+++ L A+ D + +F +YG+V +P T + KGF ++
Sbjct: 380 RAKQFGDVPSAPSSTLFIGNLSFNAQRDNLYDIFGEYGRVVSCRMPTHPDTQQPKGFGYI 439
Query: 244 EFSTKEEAAKALE 256
EFST +EA ALE
Sbjct: 440 EFSTVDEAKAALE 452
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 37/65 (56%)
Query: 191 KPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEE 250
K D + T++V +L + ++++ F G VT + K++GK +G+ +V+F TK +
Sbjct: 285 KQDEEPATLFVGRLSWNIDDEWLQREFEPLGGVTGARVIYEKASGKSRGYGYVDFETKSQ 344
Query: 251 AAKAL 255
A AL
Sbjct: 345 AQHAL 349
>gi|428305437|ref|YP_007142262.1| RNP-1 like RNA-binding protein [Crinalium epipsammum PCC 9333]
gi|428246972|gb|AFZ12752.1| RNP-1 like RNA-binding protein [Crinalium epipsammum PCC 9333]
Length = 102
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 36/60 (60%)
Query: 197 CTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
+IYV L + + + VF++YG V V LP + TG+++GF FVE ST +E A++
Sbjct: 1 MSIYVGNLSYQVTEEDLTEVFAEYGTVKRVQLPTDRETGRMRGFGFVEMSTDDEETAAID 60
>gi|348587078|ref|XP_003479295.1| PREDICTED: ELAV-like protein 2 isoform 2 [Cavia porcellus]
Length = 347
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 165 KALRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVT 224
+A R S+ +T DG + + P C I+V L P+A+ + +F +G VT
Sbjct: 233 QAQRFSRFSPMTIDGMTSLAGINIPGHPGTGWC-IFVYNLAPDADESILWQMFGPFGAVT 291
Query: 225 YVSLPKFKSTGKLKGFAFVEFSTKEEAAKAL 255
V + + +T K KGF FV + +EAA A+
Sbjct: 292 NVKVIRDFNTNKCKGFGFVTMTNYDEAAMAI 322
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 159 DPDDVVKALRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFS 218
DP D KA+ L + KV + + + +YV LP +E +FS
Sbjct: 89 DPKDAEKAINTLNGLRLQTKTIKV--SYARPSSASIRDANLYVSGLPKTMTQKELEQLFS 146
Query: 219 KYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLN 260
+YG++ + + TG +G F+ F + EA +A++ GLN
Sbjct: 147 QYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIK-GLN 187
>gi|113478076|ref|YP_724137.1| RNA-binding region RNP-1 [Trichodesmium erythraeum IMS101]
gi|110169124|gb|ABG53664.1| RNA-binding region RNP-1 [Trichodesmium erythraeum IMS101]
Length = 97
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%)
Query: 197 CTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
+IYV L + + + VF++YG V V LP + TG+ +GF FVE S++EE KA++
Sbjct: 1 MSIYVGNLSYDVTQEDLSEVFAEYGTVKRVQLPTDRETGRPRGFGFVEMSSEEEEQKAID 60
>gi|361128049|gb|EHL00002.1| putative Polyadenylate-binding protein, cytoplasmic and nuclear
[Glarea lozoyensis 74030]
Length = 783
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%)
Query: 197 CTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
IYV+ +P EA + +F K+G VT SL + + TGK +GF FV F E AA A++
Sbjct: 243 TNIYVKNIPVEATDEEFRELFEKFGDVTSASLARDQDTGKSRGFGFVNFINHEHAATAVD 302
>gi|440909067|gb|ELR59018.1| ELAV-like protein 2 [Bos grunniens mutus]
Length = 388
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 169 KSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSL 228
KS+ +T DG + + P C I+V L P+A+ + +F +G VT V +
Sbjct: 278 KSRFSPMTIDGMTSLAGINIPGHPGTGWC-IFVYNLAPDADESILWQMFGPFGAVTNVKV 336
Query: 229 PKFKSTGKLKGFAFVEFSTKEEAAKAL 255
+ +T K KGF FV + +EAA A+
Sbjct: 337 IRDFNTNKCKGFGFVTMTNYDEAAMAI 363
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 48/106 (45%), Gaps = 3/106 (2%)
Query: 159 DPDDVVKALRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFS 218
DP D KA+ L + KV + + + +YV LP +E +FS
Sbjct: 117 DPKDAEKAINTLNGLRLQTKTIKV--SYARPSSASIRDANLYVSGLPKTMTQKELEQLFS 174
Query: 219 KYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNPCPP 264
+YG++ + + TG +G F+ F + EA +A++ GLN P
Sbjct: 175 QYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIK-GLNGQKP 219
>gi|268574300|ref|XP_002642127.1| C. briggsae CBR-RNP-4 protein [Caenorhabditis briggsae]
Length = 142
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 40/63 (63%)
Query: 194 VDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAK 253
V+ ++V + EA D + FS+YGK+ + L + TG LKG+A VE+ T++EA++
Sbjct: 52 VEGWIVFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYETQKEASE 111
Query: 254 ALE 256
A+E
Sbjct: 112 AIE 114
>gi|425445615|ref|ZP_18825643.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9443]
gi|389734381|emb|CCI01971.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9443]
Length = 97
Score = 50.8 bits (120), Expect = 7e-04, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 36/58 (62%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKAL 255
+IYV LP E + + + VF++YG + V P + TG+ +GFAFVE T E+ + A+
Sbjct: 2 SIYVGNLPFEVDQNDVVEVFTEYGTIKRVHFPMERETGRKRGFAFVEMETPEQESAAI 59
>gi|427795087|gb|JAA62995.1| Putative c-mpl binding protein, partial [Rhipicephalus pulchellus]
Length = 922
Score = 50.8 bits (120), Expect = 7e-04, Method: Composition-based stats.
Identities = 37/147 (25%), Positives = 65/147 (44%), Gaps = 14/147 (9%)
Query: 109 LYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALR 168
L + +M +E+Y S NL D + + + + N++ +LT D +V LR
Sbjct: 141 LRRMLMQQLEYYFSRENLANDTYLLSQMDSDQYVPIGTVANFNQIKKLTKDLSLIVDVLR 200
Query: 169 KSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSL 228
+S ++V E G KVR P+ C + + ++P IE++F K
Sbjct: 201 ESPNVQVDEAGEKVR--------PNHKRCVLILREIPESTPVKDIEALFKASDKC----- 247
Query: 229 PKFKSTGKLKGFA-FVEFSTKEEAAKA 254
P+F S + +V F + E+A +A
Sbjct: 248 PQFMSCEFAHNSSWYVTFESDEDAQQA 274
Score = 40.0 bits (92), Expect = 1.1, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 37/76 (48%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEVT 60
+E+Y S NL D + + + + N++ +LT D +V LR+S ++V
Sbjct: 149 LEYYFSRENLANDTYLLSQMDSDQYVPIGTVANFNQIKKLTKDLSLIVDVLRESPNVQVD 208
Query: 61 EDGTKVKGNIIRHFLV 76
E G KV+ N R L+
Sbjct: 209 EAGEKVRPNHKRCVLI 224
>gi|46592826|ref|NP_997569.1| ELAV-like protein 2 isoform 3 [Mus musculus]
gi|49114392|gb|AAH46598.2| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B) [Mus musculus]
Length = 347
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 165 KALRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVT 224
+A R S+ +T DG + + P C I+V L P+A+ + +F +G VT
Sbjct: 233 QAQRFSRFSPMTIDGMTSLAGINIPGHPGTGWC-IFVYNLAPDADESILWQMFGPFGAVT 291
Query: 225 YVSLPKFKSTGKLKGFAFVEFSTKEEAAKAL 255
V + + +T K KGF FV + +EAA A+
Sbjct: 292 NVKVIRDFNTNKCKGFGFVTMTNYDEAAMAI 322
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 159 DPDDVVKALRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFS 218
DP D KA+ L + KV + + + +YV LP +E +FS
Sbjct: 89 DPKDAEKAINTLNGLRLQTKTIKV--SYARPSSASIRDANLYVSGLPKTMTQKELEQLFS 146
Query: 219 KYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLN 260
+YG++ + + TG +G F+ F + EA +A++ GLN
Sbjct: 147 QYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIK-GLN 187
>gi|77735665|ref|NP_001029526.1| MKI67 FHA domain-interacting nucleolar phosphoprotein [Bos taurus]
gi|114150027|sp|Q3SZM1.1|MK67I_BOVIN RecName: Full=MKI67 FHA domain-interacting nucleolar
phosphoprotein; AltName: Full=Nucleolar protein
interacting with the FHA domain of pKI-67
gi|74267638|gb|AAI02792.1| MKI67 (FHA domain) interacting nucleolar phosphoprotein [Bos
taurus]
gi|296490483|tpg|DAA32596.1| TPA: MKI67 FHA domain-interacting nucleolar phosphoprotein [Bos
taurus]
Length = 296
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 39/78 (50%)
Query: 183 RRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAF 242
RR Q+K IYV LPP I + FS++G VT L + K TG KG+ F
Sbjct: 31 RRATKQQEKQKPTPGVIYVGHLPPTLYETQIRAYFSQFGTVTRFRLSRSKKTGNSKGYGF 90
Query: 243 VEFSTKEEAAKALELGLN 260
VEF +++ A A E N
Sbjct: 91 VEFESEDVAKIAAETMNN 108
>gi|444729824|gb|ELW70227.1| ELAV-like protein 2 [Tupaia chinensis]
Length = 353
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 169 KSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSL 228
KS+ +T DG + + P C I+V L P+A+ + +F +G VT V +
Sbjct: 243 KSRFSPMTIDGMTSLAGINIPGHPGTGWC-IFVYNLAPDADESILWQMFGPFGAVTNVKV 301
Query: 229 PKFKSTGKLKGFAFVEFSTKEEAAKAL 255
+ +T K KGF FV + +EAA A+
Sbjct: 302 IRDFNTNKCKGFGFVTMTNYDEAAMAI 328
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 159 DPDDVVKALRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFS 218
DP D KA+ L + KV + + + +YV LP +E +FS
Sbjct: 82 DPKDAEKAINTLNGLRLQTKTIKV--SYARPSSASIRDANLYVSGLPKTMTQKELEQLFS 139
Query: 219 KYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLN 260
+YG++ + + TG +G F+ F + EA +A++ GLN
Sbjct: 140 QYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIK-GLN 180
>gi|365985359|ref|XP_003669512.1| hypothetical protein NDAI_0C06100 [Naumovozyma dairenensis CBS 421]
gi|343768280|emb|CCD24269.1| hypothetical protein NDAI_0C06100 [Naumovozyma dairenensis CBS 421]
Length = 585
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 197 CTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
IYV+ + E + +FSKYGKV +L K + GKLKGF FV+F E+AAKA+E
Sbjct: 221 TNIYVKNINLETTDEEFTELFSKYGKVLSAALEKTED-GKLKGFGFVDFENHEDAAKAVE 279
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 197 CTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKAL 255
++++ L + + ++ F+ YG +T V + + ++ GK +GF FV FST EEA KA+
Sbjct: 324 VNLFIKNLDDSIDDEKLKEEFAPYGNITSVRVMRTEN-GKSRGFGFVCFSTPEEATKAI 381
>gi|426221240|ref|XP_004004818.1| PREDICTED: MKI67 FHA domain-interacting nucleolar phosphoprotein
[Ovis aries]
Length = 296
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 39/78 (50%)
Query: 183 RRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAF 242
RR Q+K IYV LPP I + FS++G VT L + K TG KG+ F
Sbjct: 31 RRATKQQEKRKSTPGVIYVGHLPPSLYETQIRAYFSQFGTVTRFRLSRSKKTGNSKGYGF 90
Query: 243 VEFSTKEEAAKALELGLN 260
VEF +++ A A E N
Sbjct: 91 VEFESEDVAKIAAETMNN 108
>gi|297839947|ref|XP_002887855.1| La domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297333696|gb|EFH64114.1| La domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 412
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 76/169 (44%), Gaps = 21/169 (12%)
Query: 111 QQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN--------KLARLTHDP-- 160
++++ +EFY SDSNL D F ++ + +S + VS+ L C+ L + +
Sbjct: 10 KKLLTQVEFYFSDSNLPTDGFLNREVTKSKDGLVSLPLVCSFSRMRNLLGLGNVNREDIP 69
Query: 161 ----DDVVKALRKSKLLEVTEDGTKVRRTVVVQDKPD-----VDECTIYVEKLPPEAEHD 211
D V LR S L+V+ +G ++ R + KP+ V T+ + +
Sbjct: 70 PSIVDQVATLLRTSDFLKVSNNGQRIGRGSKLS-KPEEVLEQVHRRTLAASPFEYSTKME 128
Query: 212 YIESVFSKYGKVTYVSLP-KFKSTGKLKGFAFVEFSTKEEAAKALELGL 259
+ S FS+Y KV V LP + G A VEFS+ ++ L L
Sbjct: 129 DVASFFSQYAKVNSVRLPHHIADKRRFSGTALVEFSSVQDTEHVLSQSL 177
>gi|207080284|ref|NP_001128867.1| DKFZP459N111 protein [Pongo abelii]
gi|390458025|ref|XP_003732040.1| PREDICTED: ELAV-like protein 2 [Callithrix jacchus]
gi|402897269|ref|XP_003911691.1| PREDICTED: ELAV-like protein 2 isoform 5 [Papio anubis]
gi|403272644|ref|XP_003928162.1| PREDICTED: ELAV-like protein 2 isoform 4 [Saimiri boliviensis
boliviensis]
gi|426361469|ref|XP_004047933.1| PREDICTED: ELAV-like protein 2 isoform 5 [Gorilla gorilla gorilla]
gi|55731642|emb|CAH92527.1| hypothetical protein [Pongo abelii]
Length = 389
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 169 KSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSL 228
KS+ +T DG + + P C I+V L P+A+ + +F +G VT V +
Sbjct: 279 KSRFSPMTIDGMTSLAGINIPGHPGTGWC-IFVYNLAPDADESILWQMFGPFGAVTNVKV 337
Query: 229 PKFKSTGKLKGFAFVEFSTKEEAAKAL 255
+ +T K KGF FV + +EAA A+
Sbjct: 338 IRDFNTNKCKGFGFVTMTNYDEAAMAI 364
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 48/106 (45%), Gaps = 3/106 (2%)
Query: 159 DPDDVVKALRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFS 218
DP D KA+ L + KV + + + +YV LP +E +FS
Sbjct: 118 DPKDAEKAINTLNGLRLQTKTIKV--SYARPSSASIRDANLYVSGLPKTMTQKELEQLFS 175
Query: 219 KYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNPCPP 264
+YG++ + + TG +G F+ F + EA +A++ GLN P
Sbjct: 176 QYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIK-GLNGQKP 220
>gi|440910885|gb|ELR60632.1| MKI67 FHA domain-interacting nucleolar phosphoprotein [Bos
grunniens mutus]
Length = 296
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 39/78 (50%)
Query: 183 RRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAF 242
RR Q+K IYV LPP I + FS++G VT L + K TG KG+ F
Sbjct: 31 RRATKQQEKQKPTPGVIYVGHLPPTLYETQIRAYFSQFGTVTRFRLSRSKKTGNSKGYGF 90
Query: 243 VEFSTKEEAAKALELGLN 260
VEF +++ A A E N
Sbjct: 91 VEFESEDVAKIAAETMNN 108
>gi|307207798|gb|EFN85416.1| La-related protein 4 [Harpegnathos saltator]
Length = 690
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 70/148 (47%), Gaps = 13/148 (8%)
Query: 107 KQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKA 166
+QL Q + + +E+Y S NL D + + + + N++ +LT D + +
Sbjct: 139 EQLKQMLSSQLEYYFSRENLANDTYLLSQMDNDQYVPIWTVANFNQVKKLTKDIKLITEV 198
Query: 167 LRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYV 226
LR+S ++V E+G KVR P+ C + + ++P + ++++FS G ++
Sbjct: 199 LRESPNVQVDEEGQKVR--------PNHKRCIVILREIPDNTPLEDVKNLFSGEGCPRFI 250
Query: 227 SLPKFKSTGKLKGFAFVEFSTKEEAAKA 254
S +F +V F + E+A KA
Sbjct: 251 SC-EFAHNSSW----YVTFESDEDAQKA 273
Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 38/76 (50%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEVT 60
+E+Y S NL D + + + + N++ +LT D + + LR+S ++V
Sbjct: 149 LEYYFSRENLANDTYLLSQMDNDQYVPIWTVANFNQVKKLTKDIKLITEVLRESPNVQVD 208
Query: 61 EDGTKVKGNIIRHFLV 76
E+G KV+ N R ++
Sbjct: 209 EEGQKVRPNHKRCIVI 224
>gi|220910060|ref|YP_002485371.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7425]
gi|219866671|gb|ACL47010.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7425]
Length = 99
Score = 50.8 bits (120), Expect = 8e-04, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 35/59 (59%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
+IYV L + + F++YG V V LP + TG+L+GFAFVE ST +E A+E
Sbjct: 2 SIYVGNLSYSVTQNDLIQAFTEYGSVKSVHLPTDRETGRLRGFAFVEMSTSDEETAAIE 60
>gi|67605110|ref|XP_666661.1| cutinase negative acting protein [Cryptosporidium hominis TU502]
gi|54657695|gb|EAL36429.1| cutinase negative acting protein [Cryptosporidium hominis]
Length = 475
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 38/60 (63%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALEL 257
++ V +P ++ + I+S F+ G V VS+P++ TGK++GFA VEF E+ AL+L
Sbjct: 357 SVIVRNIPFSSDDESIKSFFNGCGVVKRVSIPRYSDTGKMRGFAMVEFENDEQIQNALKL 416
>gi|428203936|ref|YP_007082525.1| RRM domain-containing RNA-binding protein [Pleurocapsa sp. PCC
7327]
gi|427981368|gb|AFY78968.1| RRM domain-containing RNA-binding protein [Pleurocapsa sp. PCC
7327]
Length = 97
Score = 50.8 bits (120), Expect = 8e-04, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 35/59 (59%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
+I+V L E + SVF++YG V V +P + TG+++GFAFVE T E A+E
Sbjct: 2 SIFVGNLSYEVTQADLNSVFAEYGSVKRVHIPTDRETGRMRGFAFVEMETAAEETSAIE 60
>gi|336316921|ref|ZP_08571806.1| RRM domain-containing RNA-binding protein [Rheinheimera sp. A13L]
gi|335878778|gb|EGM76692.1| RRM domain-containing RNA-binding protein [Rheinheimera sp. A13L]
Length = 163
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 33/57 (57%)
Query: 193 DVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKE 249
D + T+YV LP A D + +F K+G V V L K + TG+ +GF FVE + K+
Sbjct: 73 DGETATLYVGNLPYRANEDAVRELFQKFGVVVNVRLMKDRQTGRRRGFGFVEVAAKD 129
>gi|193620317|ref|XP_001945375.1| PREDICTED: hypothetical protein LOC100159253 isoform 1
[Acyrthosiphon pisum]
gi|328716903|ref|XP_003246070.1| PREDICTED: hypothetical protein LOC100159253 isoform 2
[Acyrthosiphon pisum]
Length = 317
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Query: 159 DPDDVVKALRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFS 218
D + V KA K++ T G+ +RR + P C I+V +L ++I+ +FS
Sbjct: 124 DEEKVKKAENKTRTSRKTRSGSPIRRKK--ERSPTPKPCRIHVGRLTRNITKEHIQEIFS 181
Query: 219 KYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
+G + V +P + KGF+++E+S+ EEA A++
Sbjct: 182 DFGTIKEVDVPLDRFNKLCKGFSYIEYSSPEEAENAMK 219
>gi|344248615|gb|EGW04719.1| ELAV-like protein 2 [Cricetulus griseus]
Length = 347
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 165 KALRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVT 224
+A R S+ +T DG + + P C I+V L P+A+ + +F +G VT
Sbjct: 233 QAQRFSRFSPMTIDGMTSLAGINIPGHPGTGWC-IFVYNLAPDADESILWQMFGPFGAVT 291
Query: 225 YVSLPKFKSTGKLKGFAFVEFSTKEEAAKAL 255
V + + +T K KGF FV + +EAA A+
Sbjct: 292 NVKVIRDFNTNKCKGFGFVTMTNYDEAAMAI 322
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 159 DPDDVVKALRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFS 218
DP D KA+ L + KV + + + +YV LP +E +FS
Sbjct: 89 DPKDAEKAINTLNGLRLQTKTIKV--SYARPSSASIRDANLYVSGLPKTMTQKELEQLFS 146
Query: 219 KYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLN 260
+YG++ + + TG +G F+ F + EA +A++ GLN
Sbjct: 147 QYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIK-GLN 187
>gi|320591142|gb|EFX03581.1| polyadenylate-binding protein [Grosmannia clavigera kw1407]
Length = 780
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 36/60 (60%)
Query: 197 CTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
IY++ L + D +F +YG VT ++ + + TGK +GF F+ F+T E AAKA+E
Sbjct: 240 TNIYIKNLHADVTDDEFRKLFEQYGAVTSSTIARDQETGKSRGFGFINFTTHESAAKAVE 299
>gi|390458027|ref|XP_003732041.1| PREDICTED: ELAV-like protein 2 [Callithrix jacchus]
gi|402897271|ref|XP_003911692.1| PREDICTED: ELAV-like protein 2 isoform 6 [Papio anubis]
gi|426361471|ref|XP_004047934.1| PREDICTED: ELAV-like protein 2 isoform 6 [Gorilla gorilla gorilla]
Length = 390
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 169 KSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSL 228
KS+ +T DG + + P C I+V L P+A+ + +F +G VT V +
Sbjct: 280 KSRFSPMTIDGMTSLAGINIPGHPGTGWC-IFVYNLAPDADESILWQMFGPFGAVTNVKV 338
Query: 229 PKFKSTGKLKGFAFVEFSTKEEAAKAL 255
+ +T K KGF FV + +EAA A+
Sbjct: 339 IRDFNTNKCKGFGFVTMTNYDEAAMAI 365
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 48/106 (45%), Gaps = 3/106 (2%)
Query: 159 DPDDVVKALRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFS 218
DP D KA+ L + KV + + + +YV LP +E +FS
Sbjct: 119 DPKDAEKAINTLNGLRLQTKTIKV--SYARPSSASIRDANLYVSGLPKTMTQKELEQLFS 176
Query: 219 KYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNPCPP 264
+YG++ + + TG +G F+ F + EA +A++ GLN P
Sbjct: 177 QYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIK-GLNGQKP 221
>gi|313235941|emb|CBY25084.1| unnamed protein product [Oikopleura dioica]
Length = 465
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 56/109 (51%), Gaps = 24/109 (22%)
Query: 177 EDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGK 236
+D K RRT ++ + LP + +++VF K+G VT V +P K+ GK
Sbjct: 170 DDSKKARRTRLI------------IRNLPWSCTEEKLKNVFHKFGAVTEVKIP-LKADGK 216
Query: 237 LKGFAFVEFSTKEEAAKALE---------LGLNPCPP--DYQSSILTTT 274
++GF FV+F+ E+AKA++ + ++ C P DYQ+ +T
Sbjct: 217 MRGFGFVQFTHGHESAKAVKGVKEIDNRRVAVDWCIPREDYQAESKEST 265
Score = 44.3 bits (103), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 48/86 (55%), Gaps = 6/86 (6%)
Query: 180 TKVRRTVVVQDKPDVDEC-TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLK 238
T+ +R V D DV E ++++ LP +A + +E + YGK VS+ K G K
Sbjct: 329 TEEKRKKVEIDTSDVTEGRSVFLRNLPFDASQEDLEELVKPYGKAVKVSIVK-NEVGVSK 387
Query: 239 GFAFVEFSTKEEAAKAL----ELGLN 260
G AFVEF++K+EA + + EL LN
Sbjct: 388 GVAFVEFASKDEADRVVVNTKELSLN 413
>gi|449549543|gb|EMD40508.1| hypothetical protein CERSUDRAFT_44938, partial [Ceriporiopsis
subvermispora B]
Length = 151
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%)
Query: 195 DECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKA 254
D I+V L PE + ++FS+YG+V V+LP+ K TGK KGF F+ + + A
Sbjct: 28 DSAYIFVGGLNPELTEGDVITIFSQYGEVMDVNLPRHKDTGKTKGFGFLMYEDQRSTVLA 87
Query: 255 LE 256
++
Sbjct: 88 VD 89
>gi|425463678|ref|ZP_18843008.1| RNA-binding region protein [Microcystis aeruginosa PCC 9809]
gi|389830338|emb|CCI27810.1| RNA-binding region protein [Microcystis aeruginosa PCC 9809]
Length = 84
Score = 50.4 bits (119), Expect = 8e-04, Method: Composition-based stats.
Identities = 23/44 (52%), Positives = 33/44 (75%)
Query: 213 IESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
++ VF++YG V+ V LP + TGK++GF FVE S+ EE AKA+E
Sbjct: 1 MKEVFAEYGTVSRVYLPVDRETGKMRGFGFVEMSSDEEEAKAIE 44
>gi|355685702|gb|AER97820.1| eukaryotic translation initiation factor 3, subunit G [Mustela
putorius furo]
Length = 313
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 44/81 (54%)
Query: 178 DGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKL 237
DG R + ++ D TI V L + ++ +F +G ++ + L K K+TG+
Sbjct: 220 DGASRRGESMQPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQS 279
Query: 238 KGFAFVEFSTKEEAAKALELG 258
KGFAF+ F +E+AA+A+ G
Sbjct: 280 KGFAFISFHRREDAARAIAGG 300
>gi|281342337|gb|EFB17921.1| hypothetical protein PANDA_010729 [Ailuropoda melanoleuca]
Length = 241
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 189 QDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTK 248
Q+K + IYV LPP I + FS++G VT L + K TG KG+AFVEF++
Sbjct: 3 QEKEKLTPGVIYVGHLPPALYETQIRAYFSQFGAVTRFRLSRSKRTGNSKGYAFVEFAS- 61
Query: 249 EEAAKALELGLN 260
E+ AK + +N
Sbjct: 62 EDVAKIVADTMN 73
>gi|195133350|ref|XP_002011102.1| GI16192 [Drosophila mojavensis]
gi|193907077|gb|EDW05944.1| GI16192 [Drosophila mojavensis]
Length = 919
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Query: 144 VSVFLKCNKLARLTHDPDDVVKALRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEK 203
+V + K +LT ++V+ R ++L+ +DG RR V Q K I V
Sbjct: 738 AAVAAQALKDMQLTKIDGNLVELKRSDRVLKTQDDG--ARRRQVAQKK--QTGTKILVRN 793
Query: 204 LPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGK--LKGFAFVEFSTKEEAAKALE 256
+P +A H + +F +G++T + LPK + G+ +GF FV+++TK +A +A +
Sbjct: 794 IPFQAHHHEVRDIFKAFGELTSLRLPKKMTPGEDSHRGFCFVDYTTKADAKRAFD 848
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 199 IYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELG 258
I V++LP + D + ++F G +T + L K+ GK + F FV +S++ EA A++
Sbjct: 4 IIVKQLPKQISEDKLRNIFGTKGTITDLQL-KYTPDGKFRQFCFVGYSSEAEAQAAIKHF 62
Query: 259 LNPC 262
N C
Sbjct: 63 NNTC 66
>gi|541310|pir||S41505 12RNP2 protein - Synechococcus sp. (PCC 6301)
gi|961511|dbj|BAA09863.1| 12kDa RNA-binding, 12RNP2 [Synechococcus elongatus PCC 7942]
Length = 100
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%)
Query: 197 CTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEF 245
TIYV L A + + VF++YG V+ VSLP + TG+L+GFAF+E
Sbjct: 1 MTIYVGNLSFRATEEDVREVFAEYGPVSRVSLPDDRETGRLRGFAFIEM 49
>gi|389585900|dbj|GAB68630.1| RNA binding protein [Plasmodium cynomolgi strain B]
Length = 111
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Query: 194 VDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAK 253
++ I + + EA DYI+ VF KYG++ + L + TG LKG+AF+EF +A +
Sbjct: 6 IEGWIIIITNIHGEARDDYIKDVFEKYGQIKNLHLNLDRRTGFLKGYAFLEFENFVDAKR 65
Query: 254 ALE----LGLNPC 262
A++ L N C
Sbjct: 66 AIDGKNVLHKNAC 78
>gi|255939157|ref|XP_002560348.1| Pc15g01230 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211584970|emb|CAP83009.1| Pc15g01230 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 507
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Query: 184 RTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFV 243
R+ Q P+ D T++V LP A D + VF +G V + LP + TG+ KGF +V
Sbjct: 345 RSYGDQTSPESD--TLFVGNLPFSATEDALHEVFGAHGSVLGIRLPTEQETGRPKGFGYV 402
Query: 244 EFSTKEEAAKALELGLN 260
+FS+ +E AKA LN
Sbjct: 403 QFSSIDE-AKAAHGALN 418
>gi|326521360|dbj|BAJ96883.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 490
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 64/126 (50%), Gaps = 11/126 (8%)
Query: 108 QLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE----IEVSVFLKCNKLARLTHDPDDV 163
+L +I+ +E+Y SD NL D F + + ++ E + + V K+ +L D +
Sbjct: 170 ELRDKIVKQVEYYFSDENLPTDEFMLKFVMKNKEGLGNVPLGVIASFRKMKKLVQDHSAI 229
Query: 164 VKALRKSKLLEVTEDGTKVRR--TVVVQDKPDVDECTIYVEKLPPEAEHDY-IESVFSKY 220
ALR S L V+ +G +VRR + + DV + T+ VE LP D+ +ES+ K+
Sbjct: 230 EAALRTSSKLVVSSNGKRVRRLHPLPCNELKDVKKRTVVVENLP----LDFSLESLQEKF 285
Query: 221 GKVTYV 226
G V +
Sbjct: 286 GSVDKI 291
>gi|242023969|ref|XP_002432403.1| lupus la ribonucleoprotein, putative [Pediculus humanus corporis]
gi|212517826|gb|EEB19665.1| lupus la ribonucleoprotein, putative [Pediculus humanus corporis]
Length = 549
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 69/148 (46%), Gaps = 13/148 (8%)
Query: 107 KQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKA 166
+QL Q + + +E+Y S NL D + + + + N++ +LT D + +
Sbjct: 60 EQLKQMLSSQLEYYFSRENLANDAYLISQMDNDQYVPIWTVANFNQVKKLTTDIKLITEV 119
Query: 167 LRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYV 226
LR+S ++V E+G KVR P+ C + + ++P + I+++FS G +
Sbjct: 120 LRESPNVQVDEEGQKVR--------PNHKRCIVILREIPDSTPLEEIKNLFSGEGCPRLI 171
Query: 227 SLPKFKSTGKLKGFAFVEFSTKEEAAKA 254
S +F +V F + E+A KA
Sbjct: 172 SC-EFAHNNSW----YVTFESDEDAQKA 194
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 38/76 (50%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEVT 60
+E+Y S NL D + + + + N++ +LT D + + LR+S ++V
Sbjct: 70 LEYYFSRENLANDAYLISQMDNDQYVPIWTVANFNQVKKLTTDIKLITEVLRESPNVQVD 129
Query: 61 EDGTKVKGNIIRHFLV 76
E+G KV+ N R ++
Sbjct: 130 EEGQKVRPNHKRCIVI 145
>gi|12324595|gb|AAG52256.1|AC011717_24 putative RNA-binding protein; 55844-57764 [Arabidopsis thaliana]
Length = 384
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 78/169 (46%), Gaps = 21/169 (12%)
Query: 111 QQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN--------KLARLTHDP-- 160
++++ +EFY SDSNL D F ++ + +S + VS+ L C+ L + +
Sbjct: 11 KKLLTQVEFYFSDSNLPTDGFLNREVTKSKDGLVSLPLVCSFSRMRNLLGLGNINREDIP 70
Query: 161 ----DDVVKALRKSKLLEVTEDGTKVRRTVVVQDKPD-----VDECTIYVEKLPPEAEHD 211
++V LR S L+V+ +G ++ R + KP+ V T+ + +
Sbjct: 71 PRIVEEVANLLRTSDFLKVSNNGQRIGRGTKLS-KPEEVLEQVHRRTLAASPFEYSIKME 129
Query: 212 YIESVFSKYGKVTYVSL-PKFKSTGKLKGFAFVEFSTKEEAAKALELGL 259
+ S FS+Y KV V L P + G A VEFS++++ L L
Sbjct: 130 DVSSFFSQYAKVNSVRLPPNIADKRRFCGTALVEFSSEQDTQDILRQSL 178
>gi|359463214|ref|ZP_09251777.1| RNA-binding protein [Acaryochloris sp. CCMEE 5410]
Length = 99
Score = 50.4 bits (119), Expect = 9e-04, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 36/59 (61%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
+IY+ L +A + +VF++YG V V +P + TG+ +GFAFVE E AKA++
Sbjct: 12 SIYIGNLSFDATEQDLNAVFAEYGTVKQVKMPTDRETGRKRGFAFVEMGNDAEEAKAID 70
>gi|317970365|ref|ZP_07971755.1| RNA-binding protein RbpD [Synechococcus sp. CB0205]
Length = 89
Score = 50.4 bits (119), Expect = 9e-04, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 39/59 (66%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
TIYV L +AE + + +FS+YG+V+ SLP + TG+ +GFAFVE + + KA++
Sbjct: 2 TIYVGNLSFQAEQEDLLDLFSQYGEVSKCSLPLDRETGRKRGFAFVEMANDADEQKAID 60
>gi|256070560|ref|XP_002571611.1| lupus la ribonucleoprotein [Schistosoma mansoni]
gi|353231564|emb|CCD77982.1| putative lupus la ribonucleoprotein [Schistosoma mansoni]
Length = 1099
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 45/75 (60%)
Query: 109 LYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALR 168
+ QI++ +EFY S NL +D + + + ++V+V K N++A L D +D+++A+R
Sbjct: 409 IRHQILHQVEFYFSPDNLARDVYLRRQMDSDGWVDVNVIAKFNRVASLCTDLNDILEAIR 468
Query: 169 KSKLLEVTEDGTKVR 183
S LL+V +VR
Sbjct: 469 VSPLLDVDVPKARVR 483
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 46/83 (55%), Gaps = 2/83 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEVT 60
+EFY S NL +D + + + ++V+V K N++A L D +D+++A+R S LL+V
Sbjct: 417 VEFYFSPDNLARDVYLRRQMDSDGWVDVNVIAKFNRVASLCTDLNDILEAIRVSPLLDVD 476
Query: 61 EDGTKV--KGNIIRHFLVPISME 81
+V K N L P+S E
Sbjct: 477 VPKARVRCKNNPSIWPLPPVSNE 499
>gi|212532257|ref|XP_002146285.1| RNA-binding La domain protein [Talaromyces marneffei ATCC 18224]
gi|210071649|gb|EEA25738.1| RNA-binding La domain protein [Talaromyces marneffei ATCC 18224]
Length = 394
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 84/174 (48%), Gaps = 26/174 (14%)
Query: 110 YQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDP-DDVVKA 166
+ +I +EFY SDSNL D F + + S +E+S+ ++ R P +V+A
Sbjct: 98 HDEIRKQVEFYFSDSNLPMDNFLLKKVGGSANHAVELSILHSFKRMRRFQ--PFSAIVEA 155
Query: 167 LRKSKLLEVTEDGTKVRRTVVVQDK------PDVDEC--------TIYVEKLPPEAEHDY 212
++ S +L++ ++ TKV+R V + + P+V + ++YV+ E
Sbjct: 156 MKTSTVLDLVDNDTKVQRKVPLPESVNDFLDPNVVKVFENEAMSRSVYVKGFGEEGPKTQ 215
Query: 213 --IESVFSKYGKVTYVSLPK-FKSTGKLKGFAFVEFSTKEEAAKALELGLNPCP 263
IE+ F+ +G + L + F T KG FVEF T+E K L L+P P
Sbjct: 216 FEIEAFFAPFGPTKAIRLRRAFDKT--FKGSVFVEFDTEETQKKF--LALDPAP 265
>gi|348587076|ref|XP_003479294.1| PREDICTED: ELAV-like protein 2 isoform 1 [Cavia porcellus]
Length = 360
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 169 KSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSL 228
KS+ +T DG + + P C I+V L P+A+ + +F +G VT V +
Sbjct: 250 KSRFSPMTIDGMTSLAGINIPGHPGTGWC-IFVYNLAPDADESILWQMFGPFGAVTNVKV 308
Query: 229 PKFKSTGKLKGFAFVEFSTKEEAAKAL 255
+ +T K KGF FV + +EAA A+
Sbjct: 309 IRDFNTNKCKGFGFVTMTNYDEAAMAI 335
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 48/106 (45%), Gaps = 3/106 (2%)
Query: 159 DPDDVVKALRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFS 218
DP D KA+ L + KV + + + +YV LP +E +FS
Sbjct: 89 DPKDAEKAINTLNGLRLQTKTIKV--SYARPSSASIRDANLYVSGLPKTMTQKELEQLFS 146
Query: 219 KYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNPCPP 264
+YG++ + + TG +G F+ F + EA +A++ GLN P
Sbjct: 147 QYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIK-GLNGQKP 191
>gi|307151256|ref|YP_003886640.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7822]
gi|306981484|gb|ADN13365.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7822]
Length = 97
Score = 50.4 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 27/61 (44%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEF-STKEEAAKALE 256
+IYV LP E E +I +F+ YG+V V +P K TG+ +GFAFVE +T +E + E
Sbjct: 2 SIYVGNLPFEVEEKHINEIFADYGQVKRVYMPVDKETGRRRGFAFVEMENTSQEDSAIAE 61
Query: 257 L 257
L
Sbjct: 62 L 62
>gi|432853012|ref|XP_004067497.1| PREDICTED: la-related protein 6-like [Oryzias latipes]
Length = 682
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
Query: 108 QLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN--KLARLTHDPDDVVK 165
+L Q+++ +E+YLSD NL D F + ++ + VSV L + K+ LT D
Sbjct: 271 ELIQKLVAQIEYYLSDENLEHDAFLLKHVRRNKLGFVSVKLLTSFKKVKHLTRDWRTTAY 330
Query: 166 ALRKSKLLEVTEDGTKVRRTVVV 188
AL+ SK+LE+ E+G KVRR V
Sbjct: 331 ALKHSKMLELNEEGRKVRRKSAV 353
Score = 44.7 bits (104), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 63/127 (49%), Gaps = 15/127 (11%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN--KLARLTHDPDDVVKALRKSKLLE 58
+E+YLSD NL D F + ++ + VSV L + K+ LT D AL+ SK+LE
Sbjct: 280 IEYYLSDENLEHDAFLLKHVRRNKLGFVSVKLLTSFKKVKHLTRDWRTTAYALKHSKMLE 339
Query: 59 VTEDGTKVKGNIIRHFLVPISMETEASDNVDKDLSDLQR--------KDGGGRHRKKQLY 110
+ E+G KV+ R VP+ +E+ + LSDLQ+ K+ G
Sbjct: 340 LNEEGRKVR----RKSAVPV-FASESLPSRMLLLSDLQKWPDLAVLTKENGSGEGGATQQ 394
Query: 111 QQIMNLM 117
+Q+M L+
Sbjct: 395 EQLMKLL 401
>gi|148233564|ref|NP_001089711.1| La ribonucleoprotein domain family, member 6 [Xenopus laevis]
gi|76779778|gb|AAI06386.1| MGC130966 protein [Xenopus laevis]
Length = 489
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
Query: 108 QLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN--KLARLTHDPDDVVK 165
+L Q+++ +E+YLSD NL KD F + ++ + VSV L + K+ LT D
Sbjct: 96 ELIQKLIMQIEYYLSDENLEKDAFLLKHVRRNKMGFVSVKLLTSFKKVKHLTRDWRTTAY 155
Query: 166 ALRKSKLLEVTEDGTKVRRTVVV 188
ALR S LLE+ ED K+RR V
Sbjct: 156 ALRYSNLLELNEDNRKIRRKTPV 178
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN--KLARLTHDPDDVVKALRKSKLLE 58
+E+YLSD NL KD F + ++ + VSV L + K+ LT D ALR S LLE
Sbjct: 105 IEYYLSDENLEKDAFLLKHVRRNKMGFVSVKLLTSFKKVKHLTRDWRTTAYALRYSNLLE 164
Query: 59 VTEDGTKVKGNIIRHFLVPI 78
+ ED K++ R VP+
Sbjct: 165 LNEDNRKIR----RKTPVPV 180
>gi|410978372|ref|XP_003995567.1| PREDICTED: ELAV-like protein 2-like isoform 2 [Felis catus]
Length = 360
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 169 KSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSL 228
KS+ +T DG + + P C I+V L P+A+ + +F +G VT V +
Sbjct: 250 KSRFSPMTIDGMTSLAGINIPGHPGTGWC-IFVYNLAPDADESILWQMFGPFGAVTNVKV 308
Query: 229 PKFKSTGKLKGFAFVEFSTKEEAAKAL 255
+ +T K KGF FV + +EAA A+
Sbjct: 309 IRDFNTNKCKGFGFVTMTNYDEAAMAI 335
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 48/106 (45%), Gaps = 3/106 (2%)
Query: 159 DPDDVVKALRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFS 218
DP D KA+ L + KV + + + +YV LP +E +FS
Sbjct: 89 DPKDAEKAINTLNGLRLQTKTIKV--SYARPSSASIRDANLYVSGLPKTMTQKELEQLFS 146
Query: 219 KYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNPCPP 264
+YG++ + + TG +G F+ F + EA +A++ GLN P
Sbjct: 147 QYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIK-GLNGQKP 191
>gi|405965605|gb|EKC30968.1| RNA-binding protein 28 [Crassostrea gigas]
Length = 818
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Query: 188 VQDKPDVDEC-TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFS 246
V K DV E T+++ +P + + + +E FS+YGK+ YV + TG+ KG AFV+F
Sbjct: 436 VHHKNDVGEGKTLFIRNVPFDIDEESLEDEFSEYGKINYVKIVVNPKTGQPKGTAFVQFK 495
Query: 247 TKEEAAK 253
T++EA K
Sbjct: 496 TQKEAEK 502
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 35/52 (67%), Gaps = 2/52 (3%)
Query: 211 DYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKAL-ELGLNP 261
+ ++ F K+G+VT V +PK K+ GKL+GF V+F ++A+KA+ E+ P
Sbjct: 256 EKLKETFEKFGEVTEVQIPKLKN-GKLQGFGIVQFKEVDDASKAMAEMNAKP 306
>gi|348500326|ref|XP_003437724.1| PREDICTED: la-related protein 6-like [Oreochromis niloticus]
Length = 689
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
Query: 108 QLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN--KLARLTHDPDDVVK 165
+L Q+++ +E+YLSD NL D F + ++ + VSV L + K+ LT D
Sbjct: 279 ELIQKLVTQIEYYLSDENLEHDAFLLKHVRRNKLGFVSVKLLTSFKKVKHLTRDWRTTAY 338
Query: 166 ALRKSKLLEVTEDGTKVRRTVVV 188
ALR SK+LE+ ++G KVRR V
Sbjct: 339 ALRHSKILELNDEGRKVRRKSAV 361
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 63/127 (49%), Gaps = 15/127 (11%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN--KLARLTHDPDDVVKALRKSKLLE 58
+E+YLSD NL D F + ++ + VSV L + K+ LT D ALR SK+LE
Sbjct: 288 IEYYLSDENLEHDAFLLKHVRRNKLGFVSVKLLTSFKKVKHLTRDWRTTAYALRHSKILE 347
Query: 59 VTEDGTKVKGNIIRHFLVPISMETEASDNVDKDLSDLQR--------KDGGGRHRKKQLY 110
+ ++G KV+ R VP+ +E+ + LSDLQR KD G
Sbjct: 348 LNDEGRKVR----RKSAVPV-FASESLPSRMLLLSDLQRWPELAALTKDNGSAEGGATQQ 402
Query: 111 QQIMNLM 117
+Q+M L+
Sbjct: 403 EQLMKLL 409
>gi|258570597|ref|XP_002544102.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237904372|gb|EEP78773.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 435
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 79/171 (46%), Gaps = 24/171 (14%)
Query: 111 QQIMNLMEFYLSDSNLRKDRFFSQLL--QESPEIEVSVFLKCNKLARLTHDP-DDVVKAL 167
+QI +EFY SDSNL D+F + E+ +E+S+ ++ R P +V+AL
Sbjct: 124 EQIRKQVEFYFSDSNLPMDKFLLSKVGGSENRPVELSLLHSFKRMRRFQ--PFSAIVEAL 181
Query: 168 RKSKLLEVTEDGTKVRRTVVVQDKPDVDEC--------------TIYVE---KLPPEAEH 210
+ S +E+T D T +RR V + + D +IY + K P +
Sbjct: 182 KTSDTIELTNDNTCIRRKVPLPESVTEDASWSVTKVFEDKAMHRSIYAKGFGKEEPSTQF 241
Query: 211 DYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNP 261
D IE+ F+ YG V L + + KG FVEF +++ K L L P
Sbjct: 242 D-IEAFFAPYGPTNAVRL-RRTNEKIFKGSVFVEFDSEDTQKKFLALEPKP 290
>gi|427738497|ref|YP_007058041.1| RRM domain-containing RNA-binding protein [Rivularia sp. PCC 7116]
gi|427373538|gb|AFY57494.1| RRM domain-containing RNA-binding protein [Rivularia sp. PCC 7116]
Length = 95
Score = 50.4 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 37/59 (62%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
+IYV L E + + VF++YG V V +P + TG+++GFAFVE ++ + KA+E
Sbjct: 2 SIYVGNLSYEVSQEGLNEVFAEYGTVKRVQIPTDRETGRVRGFAFVEMESEADEEKAIE 60
>gi|426402318|ref|YP_007021289.1| RNA-binding protein [Bdellovibrio bacteriovorus str. Tiberius]
gi|425858986|gb|AFY00022.1| RNA-binding protein [Bdellovibrio bacteriovorus str. Tiberius]
Length = 104
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 36/58 (62%)
Query: 199 IYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
IYV L + D + VF+++G V V++ + TG+ KGFAFVE ST+ EA A+E
Sbjct: 5 IYVGNLSFNVDQDQLNQVFAEFGTVDTVNVITDRETGRSKGFAFVEMSTETEARAAIE 62
>gi|158339703|ref|YP_001520710.1| RNA-binding protein [Acaryochloris marina MBIC11017]
gi|158309944|gb|ABW31560.1| RNA-binding protein [Acaryochloris marina MBIC11017]
Length = 89
Score = 50.4 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 36/59 (61%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
+IYV L +A + +VF++YG V V +P + TG+ +GFAFVE E AKA++
Sbjct: 2 SIYVGNLSFDATEQDLNAVFAEYGTVKQVKMPTDRETGRKRGFAFVEMGNDAEEAKAID 60
>gi|6754264|ref|NP_034616.1| ELAV-like protein 2 isoform 2 [Mus musculus]
gi|13124206|sp|Q60899.1|ELAV2_MOUSE RecName: Full=ELAV-like protein 2; AltName: Full=ELAV-like neuronal
protein 1; AltName: Full=Hu-antigen B; Short=HuB;
AltName: Full=Nervous system-specific RNA-binding
protein Mel-N1
gi|1144004|gb|AAC52644.1| nervous system-specific RNA binding protein Mel-N1 [Mus musculus]
gi|15020258|gb|AAK74154.1| ELAV-like neuronal protein-1 [Mus musculus]
gi|148699000|gb|EDL30947.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B) [Mus musculus]
Length = 360
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 169 KSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSL 228
KS+ +T DG + + P C I+V L P+A+ + +F +G VT V +
Sbjct: 250 KSRFSPMTIDGMTSLAGINIPGHPGTGWC-IFVYNLAPDADESILWQMFGPFGAVTNVKV 308
Query: 229 PKFKSTGKLKGFAFVEFSTKEEAAKAL 255
+ +T K KGF FV + +EAA A+
Sbjct: 309 IRDFNTNKCKGFGFVTMTNYDEAAMAI 335
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 48/106 (45%), Gaps = 3/106 (2%)
Query: 159 DPDDVVKALRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFS 218
DP D KA+ L + KV + + + +YV LP +E +FS
Sbjct: 89 DPKDAEKAINTLNGLRLQTKTIKV--SYARPSSASIRDANLYVSGLPKTMTQKELEQLFS 146
Query: 219 KYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNPCPP 264
+YG++ + + TG +G F+ F + EA +A++ GLN P
Sbjct: 147 QYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIK-GLNGQKP 191
>gi|320162535|ref|YP_004175760.1| RNA-binding domain-containing protein [Anaerolinea thermophila
UNI-1]
gi|319996389|dbj|BAJ65160.1| RNA-binding region [Anaerolinea thermophila UNI-1]
Length = 105
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALEL 257
IYV LP A D + S F+ YG VT ++ K + +G+ +GF FVE + EA A++
Sbjct: 2 NIYVGNLPFSANEDDLRSAFAAYGTVTSAAVIKDQFSGQSRGFGFVEMPNQAEAEAAIQ- 60
Query: 258 GLN 260
GLN
Sbjct: 61 GLN 63
>gi|307204318|gb|EFN83074.1| La protein-like protein [Harpegnathos saltator]
Length = 431
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 76/150 (50%), Gaps = 14/150 (9%)
Query: 111 QQIMNLMEFYLSDSNLRKDRFF-SQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRK 169
Q+I +E+Y + N++KD+F Q + I +++ L +L L+ D ++KAL
Sbjct: 73 QKIKEQVEYYFGNVNMQKDKFLIEQTKLDDGWIPMTIMLNFKQLTNLSKSVDVILKALED 132
Query: 170 SKLLEVTEDGTKVRRTVVVQDKPDVDE--------CTIYVEKLPPEAEH-DYIESVFSKY 220
S L++++ED K+RR+ P+ +E T+YV+ P + + +++ F+ Y
Sbjct: 133 SDLMDISEDRKKIRRS-PKHPLPEYNEEYRKAQEAKTVYVKGFPQTNMNIEKLKTFFAPY 191
Query: 221 GKVTYVSLPKFKSTG---KLKGFAFVEFST 247
+ + K++ K KG FV+F T
Sbjct: 192 KPFETIVMRKYQDKEKNLKFKGSIFVQFQT 221
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 1 MEFYLSDSNLRKDRFF-SQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEV 59
+E+Y + N++KD+F Q + I +++ L +L L+ D ++KAL S L+++
Sbjct: 79 VEYYFGNVNMQKDKFLIEQTKLDDGWIPMTIMLNFKQLTNLSKSVDVILKALEDSDLMDI 138
Query: 60 TEDGTKVK 67
+ED K++
Sbjct: 139 SEDRKKIR 146
>gi|145346626|ref|XP_001417787.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578015|gb|ABO96080.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 354
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 79/175 (45%), Gaps = 35/175 (20%)
Query: 112 QIMNLMEFYLSDSNLRKDRFFSQLLQESPE------IEVSVFLKCNKLARL-----THDP 160
+I + FY SDSN+ +D + + + +S +E++ + K+ L +D
Sbjct: 28 KICRQVSFYFSDSNIGRDDYLLREVVKSKREGHDGAVELATIARFQKMRELLAPYGGYDN 87
Query: 161 -----DDVVKALRKSKLLEVTEDGTKVRRTVVVQD--KPD-----------------VDE 196
V +AL +S ++E E+GT+V+R + D +PD +D+
Sbjct: 88 FSAMMPKVAEALSQSDIVEACENGTRVKRKSLTIDGKEPDFSTDEGMLQYRQAMMVELDK 147
Query: 197 CTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEA 251
++ A D I + F G+V + L + ++ +G FVEF+T+EEA
Sbjct: 148 RYVFASPFSRHATMDSIRAFFDGVGQVKSIRLRRHTASKDFRGSVFVEFATEEEA 202
>gi|427719776|ref|YP_007067770.1| RNP-1 like RNA-binding protein [Calothrix sp. PCC 7507]
gi|427352212|gb|AFY34936.1| RNP-1 like RNA-binding protein [Calothrix sp. PCC 7507]
Length = 101
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 32/50 (64%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFST 247
++YV L E D + +VF++YG V V LP + TG+L+GFAFVE +
Sbjct: 2 SVYVGNLSYEVTQDALSAVFAEYGSVKRVQLPTDRETGRLRGFAFVEMGS 51
>gi|354491613|ref|XP_003507949.1| PREDICTED: ELAV-like protein 2 isoform 2 [Cricetulus griseus]
Length = 360
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 169 KSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSL 228
KS+ +T DG + + P C I+V L P+A+ + +F +G VT V +
Sbjct: 250 KSRFSPMTIDGMTSLAGINIPGHPGTGWC-IFVYNLAPDADESILWQMFGPFGAVTNVKV 308
Query: 229 PKFKSTGKLKGFAFVEFSTKEEAAKAL 255
+ +T K KGF FV + +EAA A+
Sbjct: 309 IRDFNTNKCKGFGFVTMTNYDEAAMAI 335
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 48/106 (45%), Gaps = 3/106 (2%)
Query: 159 DPDDVVKALRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFS 218
DP D KA+ L + KV + + + +YV LP +E +FS
Sbjct: 89 DPKDAEKAINTLNGLRLQTKTIKV--SYARPSSASIRDANLYVSGLPKTMTQKELEQLFS 146
Query: 219 KYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNPCPP 264
+YG++ + + TG +G F+ F + EA +A++ GLN P
Sbjct: 147 QYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIK-GLNGQKP 191
>gi|318041575|ref|ZP_07973531.1| RNA-binding protein [Synechococcus sp. CB0101]
Length = 90
Score = 50.4 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 40/59 (67%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
TIYV L +AE + ++S+F++YG V S+P + TG+ +GFAFVE + + + KA++
Sbjct: 2 TIYVGNLSFDAEVEDLQSLFAEYGAVRKCSVPLDRDTGRKRGFAFVEMAQEADEQKAID 60
>gi|30699461|ref|NP_178106.2| RNA recognition motif (RRM)-containing protein [Arabidopsis
thaliana]
gi|111074414|gb|ABH04580.1| At1g79880 [Arabidopsis thaliana]
gi|332198198|gb|AEE36319.1| RNA recognition motif (RRM)-containing protein [Arabidopsis
thaliana]
Length = 399
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 78/169 (46%), Gaps = 21/169 (12%)
Query: 111 QQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN--------KLARLTHDP-- 160
++++ +EFY SDSNL D F ++ + +S + VS+ L C+ L + +
Sbjct: 11 KKLLTQVEFYFSDSNLPTDGFLNREVTKSKDGLVSLPLVCSFSRMRNLLGLGNINREDIP 70
Query: 161 ----DDVVKALRKSKLLEVTEDGTKVRRTVVVQDKPD-----VDECTIYVEKLPPEAEHD 211
++V LR S L+V+ +G ++ R + KP+ V T+ + +
Sbjct: 71 PRIVEEVANLLRTSDFLKVSNNGQRIGRGTKLS-KPEEVLEQVHRRTLAASPFEYSIKME 129
Query: 212 YIESVFSKYGKVTYVSL-PKFKSTGKLKGFAFVEFSTKEEAAKALELGL 259
+ S FS+Y KV V L P + G A VEFS++++ L L
Sbjct: 130 DVSSFFSQYAKVNSVRLPPNIADKRRFCGTALVEFSSEQDTQDILRQSL 178
>gi|4850347|dbj|BAA77714.1| RNA-binding protein [Anabaena variabilis]
Length = 103
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 34/59 (57%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
++YV L + D + VF++YG V V LP + TG+++GF FVE + E A+E
Sbjct: 2 SVYVGNLSYDVTEDSLNPVFAEYGSVKRVQLPTDRETGRMRGFGFVEMGSDAEETAAIE 60
>gi|401828455|ref|XP_003887941.1| hypothetical protein EHEL_090650 [Encephalitozoon hellem ATCC
50504]
gi|392998949|gb|AFM98960.1| hypothetical protein EHEL_090650 [Encephalitozoon hellem ATCC
50504]
Length = 296
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 76/151 (50%), Gaps = 9/151 (5%)
Query: 111 QQIMNLMEFYLSDSNLRKDRFF-SQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRK 169
++I + +EFY SD+N R D+F Q L + + + N+L L DDV +AL++
Sbjct: 7 EKIKSQVEFYFSDANFRVDKFLREQSLVNDGYVPIETIISFNRLRSLEATVDDVKEALKE 66
Query: 170 SKLLEVTEDGTKVRRT----VVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTY 225
SK++E+ + K T V +K D+ + IY++ P + + ++ S + +
Sbjct: 67 SKVVELKDGMIKKIETEEYLSYVMEK-DISKRVIYIDGFPKDMSLEDVKDTLSPH--IVP 123
Query: 226 VSLPKFKSTGK-LKGFAFVEFSTKEEAAKAL 255
V + K GK G F E ++EEA +AL
Sbjct: 124 VLIRMRKDKGKSFSGSIFAEMKSEEEAQRAL 154
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 1 MEFYLSDSNLRKDRFF-SQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEV 59
+EFY SD+N R D+F Q L + + + N+L L DDV +AL++SK++E+
Sbjct: 13 VEFYFSDANFRVDKFLREQSLVNDGYVPIETIISFNRLRSLEATVDDVKEALKESKVVEL 72
Query: 60 TEDG 63
+DG
Sbjct: 73 -KDG 75
>gi|110736337|dbj|BAF00138.1| RNA-binding protein like [Arabidopsis thaliana]
Length = 399
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 78/169 (46%), Gaps = 21/169 (12%)
Query: 111 QQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN--------KLARLTHDP-- 160
++++ +EFY SDSNL D F ++ + +S + VS+ L C+ L + +
Sbjct: 11 KKLLTQVEFYFSDSNLPTDGFLNREVTKSKDGLVSLPLVCSFSRMRNLLGLGNINREDIP 70
Query: 161 ----DDVVKALRKSKLLEVTEDGTKVRRTVVVQDKPD-----VDECTIYVEKLPPEAEHD 211
++V LR S L+V+ +G ++ R + KP+ V T+ + +
Sbjct: 71 PRIVEEVANLLRTSDFLKVSNNGQRIGRGTKLS-KPEEVLEQVHRRTLAASPFEYSIKME 129
Query: 212 YIESVFSKYGKVTYVSL-PKFKSTGKLKGFAFVEFSTKEEAAKALELGL 259
+ S FS+Y KV V L P + G A VEFS++++ L L
Sbjct: 130 DVSSFFSQYAKVNSVRLPPNIADKRRFCGTALVEFSSEQDTQDILRQSL 178
>gi|156120136|ref|NP_001095297.1| antigen KI-67 [Sus scrofa]
gi|56392960|gb|AAV87154.1| proliferation-related Ki-67 antigen [Sus scrofa]
Length = 294
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 40/78 (51%)
Query: 183 RRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAF 242
RR +K + IYV LPP I + FS++G VT + L + K TG KG+ F
Sbjct: 31 RRATKQPEKQKLTPGVIYVGHLPPSLYETQIRAYFSQFGTVTRLRLSRSKKTGNSKGYGF 90
Query: 243 VEFSTKEEAAKALELGLN 260
VEF +++ A A E N
Sbjct: 91 VEFESEDVARIAAETMNN 108
>gi|296425387|ref|XP_002842223.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638484|emb|CAZ86414.1| unnamed protein product [Tuber melanosporum]
Length = 1133
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 199 IYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELG 258
+Y+ + +A + ++ +F KYG++ V LP G KG+ FV FS KEEA A+E G
Sbjct: 839 VYIRNIDFQAHDNDVQELFQKYGRIEKVRLPPGPKKGTHKGYGFVTFSAKEEALAAVE-G 897
Query: 259 LNPCPPDYQSSILT 272
N Y++ I++
Sbjct: 898 ANNTQLKYRTLIIS 911
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALEL 257
T+YV PP A+ I +F G++ + P K + F +V+F++ +EA KA L
Sbjct: 747 TLYVTNFPPTADETCIRDLFKDCGEIVDIRFPSLKYNSHRR-FCYVQFASSDEAQKATSL 805
>gi|308803152|ref|XP_003078889.1| putative small nuclear ribonucleoprotein (ISS) [Ostreococcus tauri]
gi|116057342|emb|CAL51769.1| putative small nuclear ribonucleoprotein (ISS) [Ostreococcus tauri]
Length = 269
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALEL 257
++ V L +A D + F+ YG + V +PK + TG+ +G AFV+++T+ EA A++
Sbjct: 45 SVLVRNLSWDAREDDVRDRFAGYGNILDVYMPKDRETGRPRGLAFVKYATQSEADAAVDG 104
Query: 258 GLN 260
G+
Sbjct: 105 GVG 107
>gi|428768452|ref|YP_007160242.1| RNP-1 like RNA-binding protein [Cyanobacterium aponinum PCC 10605]
gi|428682731|gb|AFZ52198.1| RNP-1 like RNA-binding protein [Cyanobacterium aponinum PCC 10605]
Length = 101
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 36/60 (60%)
Query: 197 CTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
+IYV LP E + + VF++YG V+ V +P + TG+++GFAFVE + A++
Sbjct: 1 MSIYVGNLPYEVTSEDLMEVFAEYGTVSRVHIPTDRETGRMRGFAFVEMENDNQEESAID 60
>gi|336370624|gb|EGN98964.1| hypothetical protein SERLA73DRAFT_181710 [Serpula lacrymans var.
lacrymans S7.3]
Length = 192
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 40/71 (56%)
Query: 177 EDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGK 236
+D T RR + KP D+ IY+ +LP D + FS++G VT + L + K TG+
Sbjct: 17 DDATIKRRLEKAKRKPTEDKGVIYIGRLPHGFFEDQLRGYFSQFGDVTRLRLSRNKKTGR 76
Query: 237 LKGFAFVEFST 247
K +AF+EF +
Sbjct: 77 SKHYAFLEFDS 87
>gi|339248935|ref|XP_003373455.1| conserved hypothetical protein [Trichinella spiralis]
gi|316970428|gb|EFV54366.1| conserved hypothetical protein [Trichinella spiralis]
Length = 305
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 48/95 (50%), Gaps = 4/95 (4%)
Query: 161 DDVVKALRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKY 220
+ + + +R SKLLE+ + +RR + P +CTI+V+ LP Y+ S F
Sbjct: 64 ETIQQLIRNSKLLELFNNDEMIRRN---RSAPSPLDCTIFVDNLPGNITEAYLRSAFKLC 120
Query: 221 GKVTYVSLPKFKSTGKLKG-FAFVEFSTKEEAAKA 254
G V V P K + K FAFV+F++ E KA
Sbjct: 121 GDVLDVYFPYCKQSLYCKKRFAFVQFTSCEAVLKA 155
>gi|449434124|ref|XP_004134846.1| PREDICTED: uncharacterized protein LOC101218903 [Cucumis sativus]
Length = 529
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 108 QLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKAL 167
QLY I++ +E+Y S NL KD F Q + E + V + +K+ RLT + ++ AL
Sbjct: 373 QLYAMIVSQIEYYFSGENLIKDTFLRQNMNEEGWVPVKLIASFSKVQRLTENIQTILDAL 432
Query: 168 RKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLP 205
+ S ++EV D VRR + D D I ++P
Sbjct: 433 QSSTVVEVKGD--TVRR------RHDYDRWIIRPGQVP 462
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEVT 60
+E+Y S NL KD F Q + E + V + +K+ RLT + ++ AL+ S ++EV
Sbjct: 382 IEYYFSGENLIKDTFLRQNMNEEGWVPVKLIASFSKVQRLTENIQTILDALQSSTVVEVK 441
Query: 61 EDGTKVKGN----IIRHFLVP 77
D + + + IIR VP
Sbjct: 442 GDTVRRRHDYDRWIIRPGQVP 462
>gi|90075640|dbj|BAE87500.1| unnamed protein product [Macaca fascicularis]
Length = 195
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Query: 166 ALRKSKLLEV-----TEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKY 220
A R +K EV DG R + ++ D TI V L + ++ +F +
Sbjct: 78 APRSNKTAEVLCHQACCDGASRRGESMQPNRRADDNATIRVTNLSEDTRETDLQELFRPF 137
Query: 221 GKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKAL 255
G ++ + L K K+TG+ KGFAF+ F +E+AA+A+
Sbjct: 138 GSISRIYLAKDKTTGQSKGFAFISFHRREDAARAI 172
>gi|428163795|gb|EKX32848.1| hypothetical protein GUITHDRAFT_120952 [Guillardia theta CCMP2712]
Length = 310
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 38/58 (65%)
Query: 199 IYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
+YV LP + D ++ SK G+VT +S+ +F ++ + KGFA E++T+E+A A+E
Sbjct: 70 VYVGNLPISVQDDALKEFLSKVGEVTSLSVKRFPNSDRCKGFAMAEYATEEQAKAAIE 127
>gi|448084612|ref|XP_004195649.1| Piso0_005050 [Millerozyma farinosa CBS 7064]
gi|359377071|emb|CCE85454.1| Piso0_005050 [Millerozyma farinosa CBS 7064]
Length = 294
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 78/156 (50%), Gaps = 20/156 (12%)
Query: 112 QIMNLMEFYLSDSNLRKDRFFSQLLQESPE-IEVSVFLKCNKLARLTHDPDDVVKALRKS 170
++ +EFY SDSNL+ D+F ++ + + +E+ L ++ R + V++AL+KS
Sbjct: 14 KVRKQVEFYFSDSNLQTDKFLWRIFEANDGWVELKTLLTFGRM-RQYRPEERVIEALKKS 72
Query: 171 KLLEVTEDGTKVRRTVVVQDKPDVDEC----TIYVEKLPPEAEHDYIESVFSKYGKVTYV 226
L ++ DG ++R ++D ++ +++VE P + D +E F K K+
Sbjct: 73 DKLMLSADGASIKRKDPLKDFNELRNIRKRNSVHVEGFPAKLSQDDLEEFFEK--KIA-P 129
Query: 227 SLPKFKSTGKLK-----------GFAFVEFSTKEEA 251
LPK KS ++ G VEF T+E+A
Sbjct: 130 KLPKEKSVASIRRIRTKAKKEFFGTIDVEFKTQEDA 165
Score = 37.4 bits (85), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE-IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEV 59
+EFY SDSNL+ D+F ++ + + +E+ L ++ R + V++AL+KS L +
Sbjct: 19 VEFYFSDSNLQTDKFLWRIFEANDGWVELKTLLTFGRM-RQYRPEERVIEALKKSDKLML 77
Query: 60 TEDGTKVK 67
+ DG +K
Sbjct: 78 SADGASIK 85
>gi|154303176|ref|XP_001551996.1| hypothetical protein BC1G_09608 [Botryotinia fuckeliana B05.10]
Length = 195
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 34/51 (66%)
Query: 195 DECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEF 245
D IY+ LP E I ++FS+YG+ TY++L + K TGK KGFAF+++
Sbjct: 31 DTAYIYIGGLPFELSEGDILTIFSQYGEPTYINLIRDKETGKSKGFAFLKY 81
>gi|119578990|gb|EAW58586.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B), isoform CRA_e [Homo sapiens]
Length = 374
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 169 KSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSL 228
KS+ +T DG + + P C I+V L P+A+ + +F +G VT V +
Sbjct: 264 KSRFSPMTIDGMTSLAGINIPGHPGTGWC-IFVYNLAPDADESILWQMFGPFGAVTNVKV 322
Query: 229 PKFKSTGKLKGFAFVEFSTKEEAAKAL 255
+ +T K KGF FV + +EAA A+
Sbjct: 323 IRDFNTNKCKGFGFVTMTNYDEAAMAI 349
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 48/106 (45%), Gaps = 3/106 (2%)
Query: 159 DPDDVVKALRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFS 218
DP D KA+ L + KV + + + +YV LP +E +FS
Sbjct: 103 DPKDAEKAINTLNGLRLQTKTIKV--SYARPSSASIRDANLYVSGLPKTMTQKELEQLFS 160
Query: 219 KYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNPCPP 264
+YG++ + + TG +G F+ F + EA +A++ GLN P
Sbjct: 161 QYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIK-GLNGQKP 205
>gi|115398692|ref|XP_001214935.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114191818|gb|EAU33518.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 1291
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 199 IYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALEL 257
I+V + +A D ++ +FSKYG V V +P+ K G KGF +V FSTKEEA AL L
Sbjct: 993 IHVSNVDWKANEDDLKELFSKYGHVELVRIPR-KVDGGSKGFGYVVFSTKEEAQAALAL 1050
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 197 CTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
T++V PP A+ YI +F ++G++ + P K + F +V+F T E A A +
Sbjct: 900 STLFVTNFPPTADEKYIRDLFHEFGEIIDIRFPSLKYNTHRR-FCYVQFKTGEAAQNATK 958
Query: 257 L 257
L
Sbjct: 959 L 959
>gi|449517140|ref|XP_004165604.1| PREDICTED: uncharacterized LOC101218903 [Cucumis sativus]
Length = 529
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 108 QLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKAL 167
QLY I++ +E+Y S NL KD F Q + E + V + +K+ RLT + ++ AL
Sbjct: 373 QLYAMIVSQIEYYFSGENLIKDTFLRQNMNEEGWVPVKLIASFSKVQRLTENIQTILDAL 432
Query: 168 RKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLP 205
+ S ++EV D VRR + D D I ++P
Sbjct: 433 QSSTVVEVKGD--TVRR------RHDYDRWIIRPGQVP 462
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEVT 60
+E+Y S NL KD F Q + E + V + +K+ RLT + ++ AL+ S ++EV
Sbjct: 382 IEYYFSGENLIKDTFLRQNMNEEGWVPVKLIASFSKVQRLTENIQTILDALQSSTVVEVK 441
Query: 61 EDGTKVKGN----IIRHFLVP 77
D + + + IIR VP
Sbjct: 442 GDTVRRRHDYDRWIIRPGQVP 462
>gi|260221864|emb|CBA30852.1| Putative RNA-binding protein rbpB [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 124
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 199 IYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELG 258
IYV LP D ++S FS++G+VT + + TG+ KGFAFVE ST A A++ G
Sbjct: 31 IYVGNLPYSVTDDSLQSNFSEFGEVTSAKVMMDRDTGRSKGFAFVEMSTPAFAQAAID-G 89
Query: 259 LN 260
LN
Sbjct: 90 LN 91
>gi|414591324|tpg|DAA41895.1| TPA: hypothetical protein ZEAMMB73_789693 [Zea mays]
Length = 355
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 72/164 (43%), Gaps = 20/164 (12%)
Query: 112 QIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRK 169
+I +E+Y SD NL + + + PE + +SV K+ L + ALR
Sbjct: 118 KIRKQVEYYFSDINLATTEHLMRFISKDPEGYVPISVVAGFKKIKALVQSNSMLASALRT 177
Query: 170 SKLLEVTEDGTKVRR--TVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYV- 226
S L V++DG +V+R D ++ + E LP + + + +FS G V +
Sbjct: 178 SSKLVVSDDGARVKREQPFTESDLEELQARIVVAENLPDDHCYQNLMRLFSVVGSVRTIR 237
Query: 227 ---------SLPKFKSTGKL------KGFAFVEFSTKEEAAKAL 255
+ P + KL K AFVE+ T E+AA+A+
Sbjct: 238 TCYPQTPNGTGPATNRSAKLDMLFANKLHAFVEYDTIEDAARAI 281
Score = 37.7 bits (86), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
+E+Y SD NL + + + PE + +SV K+ L + ALR S L
Sbjct: 123 VEYYFSDINLATTEHLMRFISKDPEGYVPISVVAGFKKIKALVQSNSMLASALRTSSKLV 182
Query: 59 VTEDGTKVK 67
V++DG +VK
Sbjct: 183 VSDDGARVK 191
>gi|224133750|ref|XP_002327671.1| predicted protein [Populus trichocarpa]
gi|222836756|gb|EEE75149.1| predicted protein [Populus trichocarpa]
Length = 284
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALEL 257
TI+++ LPP + D + YG++ V L + ST K K F FV+FST ++A +E
Sbjct: 200 TIFLDGLPPHWDEDRVRECLKGYGEIVRVVLARNMSTAKRKDFGFVDFSTHDDAVACIE- 258
Query: 258 GLN 260
G+N
Sbjct: 259 GIN 261
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 185 TVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVE 244
T V +++ E I+V L +A + + VF K G+V V L K ST + KG+AFV+
Sbjct: 9 TAVAKERKIKKEYEIFVGGLDRDATEEDLRKVFEKIGEVVEVRLHKNLSTNRNKGYAFVK 68
Query: 245 FSTKEEAAKALELGLNP 261
F++KE +AL NP
Sbjct: 69 FASKEHVKRALSEMKNP 85
>gi|326507886|dbj|BAJ86686.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 751
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 38/66 (57%)
Query: 196 ECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKAL 255
E I+V L EA + I VFS+ G V V L K ST K KGFAFV F+ KE+ A+AL
Sbjct: 243 ELEIFVGGLDREAVEEDIRKVFSQVGDVVEVRLHKDFSTSKNKGFAFVRFANKEQVARAL 302
Query: 256 ELGLNP 261
NP
Sbjct: 303 AEMKNP 308
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 40/81 (49%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALEL 257
++++ LPP + + +++ F YG + V L + S+ K F FV FST EEA +E
Sbjct: 423 SVFINGLPPYWDEERVKNRFKAYGLIERVVLARNMSSAKRNDFGFVNFSTHEEALACIEA 482
Query: 258 GLNPCPPDYQSSILTTTSRLS 278
N D + L RLS
Sbjct: 483 TNNTELGDDGKAKLKVRVRLS 503
>gi|296805886|ref|XP_002843767.1| ribonucleoprotein [Arthroderma otae CBS 113480]
gi|238845069|gb|EEQ34731.1| ribonucleoprotein [Arthroderma otae CBS 113480]
Length = 471
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 43/68 (63%), Gaps = 2/68 (2%)
Query: 189 QDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTK 248
Q P+ D T+++ LP A+ + ++ +FSK+G + + LP +G+ KGF +V+FS+
Sbjct: 333 QTSPESD--TLFLGNLPFSADENAVQELFSKHGSILGIRLPTDPDSGRPKGFGYVQFSSV 390
Query: 249 EEAAKALE 256
+EA ALE
Sbjct: 391 DEARAALE 398
>gi|358398966|gb|EHK48317.1| hypothetical protein TRIATDRAFT_298463 [Trichoderma atroviride IMI
206040]
Length = 376
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 83/163 (50%), Gaps = 14/163 (8%)
Query: 111 QQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSV-FLKCNKLARLTHDPDDVVKALRK 169
++I +EFY D N +D+F + S + + + K R+ VV AL++
Sbjct: 82 EEIRKQVEFYFGDWNFPQDKFMWETCGGSENKPMPIEKIHSFKRMRIFQPYSAVVAALKE 141
Query: 170 SKLLEVT-EDGTK-VRRTV----VVQDKPDVDECTIYVEKL---PPEAEHDYIESVFSKY 220
SKLLEV+ E+G + V+R V V K + T+YV+ P+ + + +ES F+++
Sbjct: 142 SKLLEVSGEEGKEVVKRKVPYKPVPTSKAKAEAATVYVKGFGDEQPDTQFE-LESFFTQF 200
Query: 221 GKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNPCP 263
G+V + L + + KG FV F+ EE AK L L+P P
Sbjct: 201 GEVNGLKL-RRTNENLFKGSVFVTFAD-EETAKNF-LALDPAP 240
>gi|94967282|ref|YP_589330.1| RNA-binding protein, RNP-1 [Candidatus Koribacter versatilis
Ellin345]
gi|94549332|gb|ABF39256.1| RNA-binding protein, RNP-1 [Candidatus Koribacter versatilis
Ellin345]
Length = 107
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 199 IYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELG 258
I+V A D I +F+ YGKV VSL + TG+ +GF FVE EAA A+E G
Sbjct: 4 IFVGNFAFTATEDDIRQLFTPYGKVDSVSLVTDRDTGRARGFGFVEMPNDTEAAAAIE-G 62
Query: 259 LN 260
LN
Sbjct: 63 LN 64
>gi|145538427|ref|XP_001454919.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124422696|emb|CAK87522.1| unnamed protein product [Paramecium tetraurelia]
Length = 656
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 193 DVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAA 252
+V+E +YV +P + +++VF KYG V+ + +PK + G L GF FVE+ EEA
Sbjct: 187 NVNERRLYVTNIPYTSTEQELKTVFEKYGTVSSIKIPK-QRGGSLSGFCFVEYQLPEEAI 245
Query: 253 KAL 255
+A
Sbjct: 246 RAF 248
>gi|427702145|ref|YP_007045367.1| RRM domain-containing RNA-binding protein [Cyanobium gracile PCC
6307]
gi|427345313|gb|AFY28026.1| RRM domain-containing RNA-binding protein [Cyanobium gracile PCC
6307]
Length = 112
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 40/59 (67%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
TIY+ L +AE + ++++F++YG++ +LP + TG+ +GFAFVE + + KA++
Sbjct: 2 TIYIGNLSFDAEVEDVKNLFAQYGELRQCTLPLDRDTGRKRGFAFVEMTNDADETKAID 60
>gi|385305672|gb|EIF49630.1| polyadenylate-binding protein [Dekkera bruxellensis AWRI1499]
Length = 655
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
+YV+ PE D + +F YGKVT LP + GK +GF FV F EAAKA++
Sbjct: 242 NVYVKNFGPEMTEDQLREMFEAYGKVTSTYLPT-DNEGKARGFGFVNFEDHXEAAKAVD 299
>gi|146165272|ref|XP_001014712.2| hypothetical protein TTHERM_00047170 [Tetrahymena thermophila]
gi|146145520|gb|EAR94568.2| hypothetical protein TTHERM_00047170 [Tetrahymena thermophila
SB210]
Length = 261
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 179 GTKVRR---TVVVQDKPDVD-ECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKST 234
G KV + TV VQ+ D + +++V LP A+ D I+ F G + + LP+++ T
Sbjct: 2 GKKVEQSNTTVEVQENNDPSLKRSVFVSGLPYSADTDAIKEYFQNCGTIENIKLPRYQDT 61
Query: 235 GKLKGFAFVEFSTKEEAAKALEL 257
GK+ G+ + FST EEA +A++L
Sbjct: 62 GKIIGYCHLVFSTPEEAQEAIKL 84
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 36/74 (48%), Gaps = 4/74 (5%)
Query: 188 VQDKPDV---DECT-IYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFV 243
V+ K DV ++CT I+V+ L + D + F K GKV V S KGFAF+
Sbjct: 105 VEYKNDVKAPEDCTTIFVKNLAFDCTEDEVGEFFEKCGKVVNVRFVYHYSQKHFKGFAFI 164
Query: 244 EFSTKEEAAKALEL 257
EF AL+L
Sbjct: 165 EFKMNSSVNAALKL 178
>gi|428779944|ref|YP_007171730.1| RRM domain-containing RNA-binding protein [Dactylococcopsis salina
PCC 8305]
gi|428694223|gb|AFZ50373.1| RRM domain-containing RNA-binding protein [Dactylococcopsis salina
PCC 8305]
Length = 95
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 11/83 (13%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKAL-- 255
+IYV L D + VF++YG V V LP + TG+++GF FVE +++ E + A+
Sbjct: 2 SIYVGNLDYSVTQDDLSEVFAEYGTVKRVHLPTDRETGRMRGFGFVEMASETEESNAISE 61
Query: 256 ---------ELGLNPCPPDYQSS 269
EL +NP P S
Sbjct: 62 LDGAEWMGRELKVNPARPRENKS 84
>gi|358252970|dbj|GAA51069.1| La-related protein 1 [Clonorchis sinensis]
Length = 1089
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 111 QQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKS 170
QI++ +EFY S+ NL +D F + + + VSV N++A L+ D ++++A+R S
Sbjct: 401 HQILHQVEFYFSEDNLARDLFLRRQMDSEGWVPVSVIASFNRVASLSSDLGEILEAIRVS 460
Query: 171 KLLEVTEDGTKVRRTV---------VVQDKPD 193
LEV + +VR V V+DK D
Sbjct: 461 PWLEVDVENARVRCRVRPSMWVLPSAVRDKSD 492
Score = 44.7 bits (104), Expect = 0.054, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 39/67 (58%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEVT 60
+EFY S+ NL +D F + + + VSV N++A L+ D ++++A+R S LEV
Sbjct: 407 VEFYFSEDNLARDLFLRRQMDSEGWVPVSVIASFNRVASLSSDLGEILEAIRVSPWLEVD 466
Query: 61 EDGTKVK 67
+ +V+
Sbjct: 467 VENARVR 473
>gi|402225922|gb|EJU05982.1| RNA-binding domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 541
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 37/75 (49%)
Query: 184 RTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFV 243
R D P TI+V + A+ D + F+ YG V V LP + TG+ KGFA+V
Sbjct: 374 RAAKFGDTPSEPSQTIFVGNVAFSADEDALWQTFADYGAVRSVRLPTDRETGQPKGFAYV 433
Query: 244 EFSTKEEAAKALELG 258
EF + A A E G
Sbjct: 434 EFEDQAGATAAFEAG 448
Score = 40.4 bits (93), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 37/59 (62%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
TI V+ L + D++++ F + G++ V + + +G+ +GF F++FST + AKALE
Sbjct: 289 TIIVKNLSWNVDDDWLKTEFEECGEIVSVRVQLDRQSGRSRGFGFIDFSTSDAVAKALE 347
>gi|425472294|ref|ZP_18851145.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9701]
gi|389881662|emb|CCI37811.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9701]
Length = 97
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 36/58 (62%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKAL 255
+IYV LP E + + + VF +YG++ V P + T + +GFAFVE T E+ AKA+
Sbjct: 2 SIYVGNLPFEVDQEDVVEVFKEYGEIKRVHFPMDRETKRKRGFAFVEMETPEQEAKAI 59
>gi|348683925|gb|EGZ23740.1| hypothetical protein PHYSODRAFT_324928 [Phytophthora sojae]
Length = 521
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 49/98 (50%), Gaps = 2/98 (2%)
Query: 109 LYQQIMNLMEFYLSDSNLRKDRFFSQLLQ--ESPEIEVSVFLKCNKLARLTHDPDDVVKA 166
L QI +EFY SDSN R+DRF + + E + SV KLA LT D + A
Sbjct: 4 LEAQIKKQVEFYFSDSNFRRDRFLREETKKREGGFVPFSVLFTFKKLAALTVDGAVLQAA 63
Query: 167 LRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKL 204
+ S ++E+ E +RR + D+ D E TI + L
Sbjct: 64 IADSDVVELNEAKNALRRKNPLPDQDDAAERTIVLAGL 101
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQ--ESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
+EFY SDSN R+DRF + + E + SV KLA LT D + A+ S ++E
Sbjct: 12 VEFYFSDSNFRRDRFLREETKKREGGFVPFSVLFTFKKLAALTVDGAVLQAAIADSDVVE 71
Query: 59 VTE 61
+ E
Sbjct: 72 LNE 74
>gi|343495650|ref|ZP_08733789.1| RNA-binding protein [Vibrio nigripulchritudo ATCC 27043]
gi|342822633|gb|EGU57333.1| RNA-binding protein [Vibrio nigripulchritudo ATCC 27043]
Length = 147
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALEL 257
T+YV LP +A ++ +FSK+G+V V L K K TGK +GF FV S +E+A K ++
Sbjct: 62 TLYVGNLPYKANETHVRQLFSKHGQVFAVRLMKDKRTGKRRGFGFVVVS-REDADKVIQ- 119
Query: 258 GLN 260
GLN
Sbjct: 120 GLN 122
>gi|330842446|ref|XP_003293189.1| hypothetical protein DICPUDRAFT_41662 [Dictyostelium purpureum]
gi|325076506|gb|EGC30286.1| hypothetical protein DICPUDRAFT_41662 [Dictyostelium purpureum]
Length = 880
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 183 RRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAF 242
+R+ + Q+ I ++ LP E+ I +F+ YG++ V +PK K G +GF F
Sbjct: 766 KRSSLPQNAKSKPSSKIIIKNLPFESTTKEIRKLFAAYGEIQSVRIPK-KPNGGHRGFGF 824
Query: 243 VEFSTKEEAAKALE 256
VEF T+EEA A+E
Sbjct: 825 VEFLTEEEAKNAME 838
>gi|294909591|ref|XP_002777803.1| lupus la ribonucleoprotein, putative [Perkinsus marinus ATCC 50983]
gi|239885765|gb|EER09598.1| lupus la ribonucleoprotein, putative [Perkinsus marinus ATCC 50983]
Length = 420
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 4/74 (5%)
Query: 117 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 174
+E+YLSD NLR D FF + + E PE + + L CNK+ ++ +++ AL + LE
Sbjct: 47 VEYYLSDDNLRHDAFFHRKISEDPEGWLPADLVLSCNKMKQMHCTAENIEHALAEGSHLE 106
Query: 175 VTEDGTK--VRRTV 186
+ +D K +RRT
Sbjct: 107 LKKDNDKLFIRRTT 120
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
+E+YLSD NLR D FF + + E PE + + L CNK+ ++ +++ AL + LE
Sbjct: 47 VEYYLSDDNLRHDAFFHRKISEDPEGWLPADLVLSCNKMKQMHCTAENIEHALAEGSHLE 106
Query: 59 VTEDGTKV 66
+ +D K+
Sbjct: 107 LKKDNDKL 114
>gi|4930239|pdb|3SXL|A Chain A, Sex-Lethal Rna Recognition Domains 1 And 2 From Drosophila
Melanogaster
gi|4930240|pdb|3SXL|B Chain B, Sex-Lethal Rna Recognition Domains 1 And 2 From Drosophila
Melanogaster
gi|4930241|pdb|3SXL|C Chain C, Sex-Lethal Rna Recognition Domains 1 And 2 From Drosophila
Melanogaster
Length = 184
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 194 VDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAK 253
+ + +YV LP D ++++F KYG + ++ + K TG+ +G AFV ++ +EEA +
Sbjct: 98 IKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQE 157
Query: 254 ALELGLNPCPPDYQSSILT 272
A+ LN P+ S L+
Sbjct: 158 AIS-ALNNVIPEGGSQPLS 175
>gi|357475507|ref|XP_003608039.1| La-related protein [Medicago truncatula]
gi|355509094|gb|AES90236.1| La-related protein [Medicago truncatula]
Length = 442
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 70/137 (51%), Gaps = 6/137 (4%)
Query: 109 LYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKA 166
L Q+I+ +E+ SD +L + F + + + PE + ++V K+ L ++ + +A
Sbjct: 99 LQQKIVKQVEYQFSDLSLLANESFQKQMNKDPEGYVPITVIASTKKIKSLVNNIHLLTQA 158
Query: 167 LRKSKLLEVTEDGTKVRR--TVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVT 224
+R S L ++ DG KV+R ++K ++ T+ E LP + H ++ +F G +
Sbjct: 159 IRHSSKLVLSADGKKVKRKHPFAEKEKEELMSRTVVAENLPDDHSHQNLQKIFGVVGSIK 218
Query: 225 YVSL--PKFKSTGKLKG 239
+ + P+ ++ + KG
Sbjct: 219 TIRICHPQEPNSSRPKG 235
>gi|171681916|ref|XP_001905901.1| hypothetical protein [Podospora anserina S mat+]
gi|170940917|emb|CAP66567.1| unnamed protein product [Podospora anserina S mat+]
Length = 804
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 197 CTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
+YV+ +P E + +F+KYG VT SL + GK +GF FV F+T E A+KA+E
Sbjct: 295 TNVYVKNIPAEVTDEEFRELFAKYGDVTSSSLAR-SDEGKSRGFGFVNFTTHEAASKAVE 353
>gi|123976178|ref|XP_001314467.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121896817|gb|EAY01957.1| hypothetical protein TVAG_430980 [Trichomonas vaginalis G3]
Length = 199
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 37/58 (63%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKAL 255
TI+V L + + +++ F+++G V +P+ TGK K F FVEFSTKE+A KA+
Sbjct: 36 TIHVGNLSFDTTEESLKAKFAEFGNVVTCRIPRRTRTGKSKSFGFVEFSTKEDADKAI 93
>gi|75906252|ref|YP_320548.1| RNA-binding region RNP-1 [Anabaena variabilis ATCC 29413]
gi|75699977|gb|ABA19653.1| RNA-binding region RNP-1 [Anabaena variabilis ATCC 29413]
Length = 99
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 26/57 (45%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEF--STKEEAA 252
+IYV L D + VFS+YG VT V LP + TG+++GF FVE S E+AA
Sbjct: 2 SIYVGNLSYSVTQDDLTKVFSEYGSVTRVQLPTDRETGRVRGFGFVEMESSAAEDAA 58
>gi|363752247|ref|XP_003646340.1| hypothetical protein Ecym_4483 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889975|gb|AET39523.1| hypothetical protein Ecym_4483 [Eremothecium cymbalariae
DBVPG#7215]
Length = 355
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 55/104 (52%), Gaps = 15/104 (14%)
Query: 169 KSKLLEVTEDGTKV-------RRTVVVQDKPD--------VDECTIYVEKLPPEAEHDYI 213
+ +LLE TEDG ++ ++ + +Q D +D +I+V + PE + +
Sbjct: 40 QDELLETTEDGKELYDNTFEGQKELFLQLGKDEKHAKQVELDTRSIFVSSITPETTAETL 99
Query: 214 ESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALEL 257
E+ F G + +++ K TG+ KG+A++EF E AKALEL
Sbjct: 100 ETHFKDVGMINRITILHNKRTGEPKGYAYIEFEMVESVAKALEL 143
>gi|308487674|ref|XP_003106032.1| CRE-RNP-4 protein [Caenorhabditis remanei]
gi|308254606|gb|EFO98558.1| CRE-RNP-4 protein [Caenorhabditis remanei]
Length = 142
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 39/63 (61%)
Query: 194 VDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAK 253
V+ ++V + EA D + FS+YGK+ + L + TG LKG+A VE+ T++EA +
Sbjct: 52 VEGWIVFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYETQKEANE 111
Query: 254 ALE 256
A+E
Sbjct: 112 AIE 114
>gi|401838668|gb|EJT42162.1| LHP1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 274
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 70/148 (47%), Gaps = 20/148 (13%)
Query: 117 MEFYLSDSNLRKDRFFSQLLQESPE-IEVSVFLKCNKLARLTHDP-DDVVKALRKSKLLE 174
+EFY S+ N DRF +++ + +S N++ + + P D V++ LR S++LE
Sbjct: 37 VEFYFSEFNFPYDRFLRATAEKNDGWVPISTIATFNRMKK--YRPVDKVIEVLRSSEILE 94
Query: 175 VTEDGTKVRR------TVVVQDKPDVDECTIYVEKLP---------PEAEHDYIESVFSK 219
V+ DG V+R T + + ++ T+ V P PE + + +E+ F K
Sbjct: 95 VSADGENVKRRVPLDLTAARNARIEQNQRTLAVMNFPHEDVEASQIPELQEN-LEAFFKK 153
Query: 220 YGKVTYVSLPKFKSTGKLKGFAFVEFST 247
G++ V L + K G VEF T
Sbjct: 154 LGEINQVRLRRDHKNKKFNGTILVEFKT 181
>gi|301773910|ref|XP_002922376.1| PREDICTED: la-related protein 6-like, partial [Ailuropoda
melanoleuca]
Length = 428
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 55/97 (56%), Gaps = 4/97 (4%)
Query: 96 QRKDG--GGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN-- 151
+R+DG G + ++L +++++ +EFY SD NL KD F + ++ + VSV L +
Sbjct: 14 EREDGEQGWKPPDQELIRKLVDQIEFYFSDENLEKDAFLLKHVRRNKLGYVSVKLLTSFK 73
Query: 152 KLARLTHDPDDVVKALRKSKLLEVTEDGTKVRRTVVV 188
K+ LT D AL+ S LE+ ED KVRRT V
Sbjct: 74 KVKHLTRDWRTTAHALKYSVTLELNEDQRKVRRTTPV 110
Score = 37.7 bits (86), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN--KLARLTHDPDDVVKALRKSKLLE 58
+EFY SD NL KD F + ++ + VSV L + K+ LT D AL+ S LE
Sbjct: 37 IEFYFSDENLEKDAFLLKHVRRNKLGYVSVKLLTSFKKVKHLTRDWRTTAHALKYSVTLE 96
Query: 59 VTEDGTKVK 67
+ ED KV+
Sbjct: 97 LNEDQRKVR 105
>gi|449673659|ref|XP_002164489.2| PREDICTED: la-related protein 6-like [Hydra magnipapillata]
Length = 412
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 97/200 (48%), Gaps = 18/200 (9%)
Query: 76 VPISMETEASDNVDKDLSDLQRKDGGGRHRKK-----QLYQQIMNLMEFYLSDSNLRKDR 130
V + E +SD D+ D R + ++ +L+++I+ E Y S+ NL KD+
Sbjct: 4 VNLKYENSSSDENKSDIDDEDRANSSKFLNEECISINELHKKIIAQAELYFSNENLLKDK 63
Query: 131 FFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEVTEDGTKVRRTVVV 188
F + ++ + E + + + N++ LT D + +V ALR S L V E+G K++R +
Sbjct: 64 FLLKHIKRNKEGYVNIKLIASFNRMRSLTKDFNIIVDALRTSSRLAVDENGLKLKRLEPL 123
Query: 189 QDKPDVDECTI---YVEKLPPEAEHDY---IESVFSKYG--KVTYVSLPKFKSTGKLKGF 240
K +++ + + +P E + ++S +SK+ K V+L +FK+T K
Sbjct: 124 P-KELLEQAHVQYLVLSDIPSENPSSFPNDLQSHYSKHPELKEKLVALVEFKNTDSAKEA 182
Query: 241 AFVEFSTKEEAAKA--LELG 258
+ +F+ K LELG
Sbjct: 183 SKTQFTEAYTGLKVSFLELG 202
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 2 EFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEV 59
E Y S+ NL KD+F + ++ + E + + + N++ LT D + +V ALR S L V
Sbjct: 51 ELYFSNENLLKDKFLLKHIKRNKEGYVNIKLIASFNRMRSLTKDFNIIVDALRTSSRLAV 110
Query: 60 TEDGTKVK 67
E+G K+K
Sbjct: 111 DENGLKLK 118
>gi|281353719|gb|EFB29303.1| hypothetical protein PANDA_011334 [Ailuropoda melanoleuca]
Length = 427
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 55/97 (56%), Gaps = 4/97 (4%)
Query: 96 QRKDG--GGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN-- 151
+R+DG G + ++L +++++ +EFY SD NL KD F + ++ + VSV L +
Sbjct: 13 EREDGEQGWKPPDQELIRKLVDQIEFYFSDENLEKDAFLLKHVRRNKLGYVSVKLLTSFK 72
Query: 152 KLARLTHDPDDVVKALRKSKLLEVTEDGTKVRRTVVV 188
K+ LT D AL+ S LE+ ED KVRRT V
Sbjct: 73 KVKHLTRDWRTTAHALKYSVTLELNEDQRKVRRTTPV 109
Score = 37.7 bits (86), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN--KLARLTHDPDDVVKALRKSKLLE 58
+EFY SD NL KD F + ++ + VSV L + K+ LT D AL+ S LE
Sbjct: 36 IEFYFSDENLEKDAFLLKHVRRNKLGYVSVKLLTSFKKVKHLTRDWRTTAHALKYSVTLE 95
Query: 59 VTEDGTKVK 67
+ ED KV+
Sbjct: 96 LNEDQRKVR 104
>gi|258564845|ref|XP_002583167.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237906868|gb|EEP81269.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 1297
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 4/79 (5%)
Query: 184 RTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFV 243
RT+ VQ + + T++V PPEA+ YI +F YG++ V P K + F +V
Sbjct: 887 RTISVQLE---TKATLFVTNFPPEADEAYIRRIFGPYGEIAEVRFPSLKFNTHRR-FCYV 942
Query: 244 EFSTKEEAAKALELGLNPC 262
+F++ +A ALEL P
Sbjct: 943 QFASTVDAHAALELDQEPV 961
Score = 40.8 bits (94), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 199 IYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALEL 257
I++ L +A D + +F +GKV +P K+ G KGF FV FST E A AL +
Sbjct: 990 IHISNLDWKATEDDLVELFMAFGKVEVARIPT-KADGGSKGFGFVAFSTPETANAALAM 1047
>gi|72383177|ref|YP_292532.1| RNA recognition motif-containing protein [Prochlorococcus marinus
str. NATL2A]
gi|72003027|gb|AAZ58829.1| RNA-binding region RNP-1 (RNA recognition motif) [Prochlorococcus
marinus str. NATL2A]
Length = 250
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 38/59 (64%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
+I+V LP AE + + +FS +G+V+ SLP + TG+ +GFAFVE + + A A+E
Sbjct: 2 SIFVGNLPFRAEQEDVMELFSPFGEVSNCSLPLERDTGRKRGFAFVEMADEAVEASAIE 60
>gi|321464386|gb|EFX75394.1| sex-lethal protein variant 1 [Daphnia pulex]
Length = 263
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 161 DDVVKALRKSKLLEVTEDGTKVRRTVVVQDKP---DVDECTIYVEKLPP-EAEHDYIESV 216
DD ++A++ L++ +R V +P D E +YV LP + D + ++
Sbjct: 79 DDAIRAIQTLNGLQIQN-----KRIKVSYARPPGEDRKETNLYVTNLPSRDVTEDELTNI 133
Query: 217 FSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
FS +G + ++L K K TG +G AFV F +EEA A+E
Sbjct: 134 FSAHGNIVQMNLLKDKITGMPRGVAFVRFDKREEALAAIE 173
>gi|124024725|ref|YP_001013841.1| RNA recognition motif-containing protein [Prochlorococcus marinus
str. NATL1A]
gi|123959793|gb|ABM74576.1| RNA-binding region RNP-1 (RNA recognition motif) [Prochlorococcus
marinus str. NATL1A]
Length = 250
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 38/59 (64%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
+I+V LP AE + + +FS +G+V+ SLP + TG+ +GFAFVE + + A A+E
Sbjct: 2 SIFVGNLPFRAEQEDVMELFSPFGEVSNCSLPLERDTGRKRGFAFVEMADEAVEASAIE 60
>gi|123483342|ref|XP_001324009.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121906884|gb|EAY11786.1| hypothetical protein TVAG_106810 [Trichomonas vaginalis G3]
Length = 321
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 187 VVQDKPDVD----ECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAF 242
++ D PD D + T+++ KL P D + VFSK+G VT V L K K TG+ + F
Sbjct: 221 MLGDIPDADARPPDTTLFICKLHPRTTEDGLRIVFSKFGTVTRVDLLKDKKTGQSLCYGF 280
Query: 243 VEFSTKEEAAKA 254
+EFS EA A
Sbjct: 281 IEFSKAVEAENA 292
>gi|77379390|gb|ABA71352.1| sex-lethal isoform 2 [Bombyx mori]
Length = 313
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 38/63 (60%)
Query: 193 DVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAA 252
D+ E +YV LP D +E++F KYG++ + + K++G +G AFV + +EEA
Sbjct: 145 DIKETNLYVTNLPRAITDDQLETIFGKYGRIVQKHILRDKNSGTPRGVAFVRYDKREEAQ 204
Query: 253 KAL 255
+A+
Sbjct: 205 EAI 207
>gi|432869170|ref|XP_004071657.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
G-like [Oryzias latipes]
Length = 284
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 44/78 (56%)
Query: 178 DGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKL 237
DG + R + ++ D TI V L + ++ +F +G ++ + L K K+TG+
Sbjct: 184 DGGRGRGESMQPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKNTGQS 243
Query: 238 KGFAFVEFSTKEEAAKAL 255
KGFAF+ F +E+AA+A+
Sbjct: 244 KGFAFISFHRREDAARAI 261
>gi|378731298|gb|EHY57757.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 763
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 183 RRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAF 242
RR + K D ++ I ++ LP EA I ++F YG++ V LPK K +GFAF
Sbjct: 625 RRKEDIAKKLDSNKTKIVIKNLPFEATKKDIRALFGAYGQLRTVRLPK-KFDNSARGFAF 683
Query: 243 VEFSTKEEAAKALE 256
EF T +EA A+E
Sbjct: 684 AEFVTPKEAENAME 697
>gi|440638671|gb|ELR08590.1| hypothetical protein GMDG_03281 [Geomyces destructans 20631-21]
Length = 422
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 80/170 (47%), Gaps = 24/170 (14%)
Query: 112 QIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCNKLARLTH-DP-DDVVKALRK 169
+I ++FY DSNL D F +L S VS+ K ++ R+ P +V+AL+
Sbjct: 107 EIRAQVDFYFGDSNLPTDDFLLELTGGSENKPVSL-KKVHEFGRMKRFQPYSTIVEALKT 165
Query: 170 SKLLEVT--EDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDY--------------I 213
S ++EV+ D V+R V +++ + +Y K EA Y I
Sbjct: 166 SVVVEVSGAADEEVVKRKVPLRNNQGSEATQLYKAK---EARSVYAKGFGDEEATTQFDI 222
Query: 214 ESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNPCP 263
E+ F+ YG V L + T KG +VEF++ EE AKA L L+P P
Sbjct: 223 EAFFATYGPTNAVRLRRDDDTKAFKGSVYVEFAS-EELAKAF-LALDPKP 270
>gi|449440159|ref|XP_004137852.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like
[Cucumis sativus]
gi|449521207|ref|XP_004167621.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like
[Cucumis sativus]
Length = 640
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 179 GTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLK 238
G VR++ V PD+ +YV+ L PE ++++ FS++GK++ + + + G +
Sbjct: 175 GKFVRKSDRVLANPDIKYTNLYVKNLDPEIGEEHLQEKFSEFGKISSMIISR-DENGVSR 233
Query: 239 GFAFVEFSTKEEAAKALE 256
GF F+ F ++A +ALE
Sbjct: 234 GFGFINFENSDDAKRALE 251
>gi|158338654|ref|YP_001519831.1| RNA-binding protein [Acaryochloris marina MBIC11017]
gi|359461822|ref|ZP_09250385.1| RNA-binding protein [Acaryochloris sp. CCMEE 5410]
gi|158308895|gb|ABW30512.1| RNA-binding protein [Acaryochloris marina MBIC11017]
Length = 86
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 28/59 (47%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFV--EFSTKEEAAKA 254
+IYV L EA D + +VF++YGKV V LP + TG+ +GF FV E ++EEAA A
Sbjct: 2 SIYVGNLSYEASQDDVTAVFAEYGKVVKVHLPVDRETGRKRGFGFVDMENDSEEEAAIA 60
>gi|121710854|ref|XP_001273043.1| pre-mRNA splicing factor (Prp24), putative [Aspergillus clavatus NRRL
1]
gi|119401193|gb|EAW11617.1| pre-mRNA splicing factor (Prp24), putative [Aspergillus clavatus NRRL
1]
Length = 1310
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 199 IYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALEL 257
I+V + +A D ++ +FSKYG+V V +P+ K G KGF ++ FSTKEEA AL +
Sbjct: 1008 IHVSNIDWKASEDDLKDLFSKYGRVETVRIPR-KVDGGSKGFGYIVFSTKEEANAALAM 1065
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 197 CTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
T++V P A+ YI ++F +YG++ V P K + F +V+F + E+A A++
Sbjct: 915 STLFVTNFPSTADESYIRNLFHEYGEIIDVRFPSLKYNTHRR-FCYVQFKSAEDAHNAVQ 973
Query: 257 L 257
L
Sbjct: 974 L 974
>gi|407789072|ref|ZP_11136175.1| RNP-1 like RNA-binding protein [Gallaecimonas xiamenensis 3-C-1]
gi|407207664|gb|EKE77600.1| RNP-1 like RNA-binding protein [Gallaecimonas xiamenensis 3-C-1]
Length = 147
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 193 DVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAA 252
++ T+YV LP A ++ F +YG+V V L K + TG+ +GF FVE + +A
Sbjct: 59 EIATVTLYVGNLPYRANEQAVQQAFERYGRVLSVRLMKDRQTGRRRGFGFVEM-LQADAE 117
Query: 253 KALELGLN 260
KA+ GLN
Sbjct: 118 KAIR-GLN 124
>gi|393245425|gb|EJD52935.1| polyadenylate binding protein [Auricularia delicata TFB-10046 SS5]
Length = 665
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
IYV+ L PE + E +F K+G +T +L K GK +GF FV F + E+AA A+E
Sbjct: 229 NIYVKNLDPELGQEGFEELFGKFGNITSAALSK-DEEGKSRGFGFVNFESHEQAAAAVE 286
>gi|66809481|ref|XP_638463.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|74996868|sp|Q54PB2.1|MRD1_DICDI RecName: Full=Multiple RNA-binding domain-containing protein 1;
AltName: Full=RNA-binding motif protein 19 homolog;
AltName: Full=RNA-binding protein 19 homolog
gi|60467060|gb|EAL65101.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 895
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 191 KPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEE 250
+P+ I ++ LP E+ I +F+ YG++ V +PK K G +GF FVEF T+EE
Sbjct: 789 QPNKPSSKIIIKNLPFESTIKEIRKLFTAYGEIQSVRIPK-KPNGGHRGFGFVEFLTEEE 847
Query: 251 AAKALE 256
A A+E
Sbjct: 848 AKNAME 853
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 193 DVDECT-IYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEA 251
DV E I+V L + + +E VFSK+GK++ + +P + K KG AF+ + E A
Sbjct: 356 DVGESGRIFVRNLSYSTKEEDLEKVFSKFGKISEIHIPIDYDSKKSKGIAFILYLIPENA 415
Query: 252 AKAL 255
+AL
Sbjct: 416 VQAL 419
>gi|453085721|gb|EMF13764.1| translation initiation factor 3, RNA-binding subunit
[Mycosphaerella populorum SO2202]
Length = 295
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 38/62 (61%)
Query: 195 DECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKA 254
D T+ V + AE + +F +YG+VT V L K + TG+ KGFAFV ++ + +AA+A
Sbjct: 212 DLATLRVTNVSEFAEEGDLREMFERYGRVTRVFLAKDRETGRAKGFAFVSYADRSDAARA 271
Query: 255 LE 256
E
Sbjct: 272 CE 273
>gi|862465|dbj|BAA04177.1| ss-DNA binding protein 12RNP2 precursor [Synechococcus elongatus
PCC 6301]
Length = 100
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%)
Query: 197 CTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEF 245
TIYV L A + + VF++YG V+ VSLP + TG+L+GFAF+E
Sbjct: 1 MTIYVGNLSFRATEEDVREVFAEYGPVSRVSLPVDRETGRLRGFAFIEM 49
>gi|164657987|ref|XP_001730119.1| hypothetical protein MGL_2501 [Malassezia globosa CBS 7966]
gi|159104014|gb|EDP42905.1| hypothetical protein MGL_2501 [Malassezia globosa CBS 7966]
Length = 664
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 197 CTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
+YV+ L P + E +F KYGK+T ++ GK +GF FV FS E+AAKA+E
Sbjct: 260 TNVYVKNLDPAVTQEEFEKLFEKYGKITSAAI-ATDQEGKSRGFGFVNFSEHEQAAKAVE 318
>gi|390478525|ref|XP_002761749.2| PREDICTED: eukaryotic translation initiation factor 3 subunit G
[Callithrix jacchus]
Length = 336
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%)
Query: 178 DGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKL 237
DG R + ++ D TI V L + ++ +F +G ++ + L K K+TG+
Sbjct: 236 DGASRRGESMQPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQS 295
Query: 238 KGFAFVEFSTKEEAAKAL 255
KGFAF+ F +E+AA+A+
Sbjct: 296 KGFAFISFHRREDAARAI 313
>gi|4929888|pdb|1B7F|A Chain A, Sxl-Lethal ProteinRNA COMPLEX
gi|4929889|pdb|1B7F|B Chain B, Sxl-Lethal ProteinRNA COMPLEX
Length = 168
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 194 VDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAK 253
+ + +YV LP D ++++F KYG + ++ + K TG+ +G AFV ++ +EEA +
Sbjct: 87 IKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQE 146
Query: 254 ALELGLNPCPPDYQSSILT 272
A+ LN P+ S L+
Sbjct: 147 AIS-ALNNVIPEGGSQPLS 164
>gi|17230269|ref|NP_486817.1| RNA binding protein [Nostoc sp. PCC 7120]
gi|81859084|sp|Q9WX37.3|RBPE_NOSS1 RecName: Full=Putative RNA-binding protein RbpE
gi|4850342|dbj|BAA77711.1| RNA binding protein [Anabaena variabilis]
gi|17131870|dbj|BAB74476.1| RNA binding protein [Nostoc sp. PCC 7120]
Length = 99
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 26/57 (45%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEF--STKEEAA 252
+IYV L D + VFS+YG VT V LP + TG+++GF FVE S E+AA
Sbjct: 2 SIYVGNLSYSVTQDDLTKVFSEYGSVTRVQLPTDRETGRVRGFGFVEMESSAAEDAA 58
>gi|427714396|ref|YP_007063020.1| RRM domain-containing RNA-binding protein [Synechococcus sp. PCC
6312]
gi|427378525|gb|AFY62477.1| RRM domain-containing RNA-binding protein [Synechococcus sp. PCC
6312]
Length = 91
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 35/58 (60%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKAL 255
+IYV L A + +E+VF++YG V V LP + TG+ +GF FVE ST E A+
Sbjct: 2 SIYVGNLSYTATQEDLEAVFAEYGSVKQVYLPVDRDTGRKRGFGFVEMSTDAEEDAAI 59
>gi|78184977|ref|YP_377412.1| RNA-binding region RNP-1 [Synechococcus sp. CC9902]
gi|116072453|ref|ZP_01469720.1| RNA-binding region RNP-1 [Synechococcus sp. BL107]
gi|78169271|gb|ABB26368.1| RNA-binding region RNP-1 [Synechococcus sp. CC9902]
gi|116064975|gb|EAU70734.1| RNA-binding region RNP-1 [Synechococcus sp. BL107]
Length = 95
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 38/59 (64%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
TIY+ L +AE +++ +F++YG+V SLP + TG+ +GFAFVE + KA++
Sbjct: 2 TIYIGNLSFQAEQEHLSDLFAEYGEVKNCSLPLDRETGRKRGFAFVEMVNDADEQKAID 60
>gi|112734730|ref|NP_001036780.1| sex-lethal isoform L [Bombyx mori]
gi|77379388|gb|ABA71351.1| sex-lethal isoform 1 [Bombyx mori]
Length = 336
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 38/63 (60%)
Query: 193 DVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAA 252
D+ E +YV LP D +E++F KYG++ + + K++G +G AFV + +EEA
Sbjct: 145 DIKETNLYVTNLPRAITDDQLETIFGKYGRIVQKHILRDKNSGTPRGVAFVRYDKREEAQ 204
Query: 253 KAL 255
+A+
Sbjct: 205 EAI 207
>gi|427706332|ref|YP_007048709.1| RNP-1 like RNA-binding protein [Nostoc sp. PCC 7107]
gi|427358837|gb|AFY41559.1| RNP-1 like RNA-binding protein [Nostoc sp. PCC 7107]
Length = 110
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%)
Query: 197 CTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
+IYV L + + ++ FS+YGKV+ V LP + TG+ +GFAFVE T+ + A+E
Sbjct: 1 MSIYVGNLSYQVTEEDLKMAFSEYGKVSRVQLPTDRETGRPRGFAFVEMETESQETAAIE 60
>gi|425767513|gb|EKV06082.1| hypothetical protein PDIG_78600 [Penicillium digitatum PHI26]
gi|425780427|gb|EKV18434.1| hypothetical protein PDIP_27010 [Penicillium digitatum Pd1]
Length = 404
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 75/168 (44%), Gaps = 18/168 (10%)
Query: 112 QIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSV-FLKCNKLARLTHDPDDVVKALRKS 170
QI +EFY SDSNL D+F + S V + L K R +V+AL+ +
Sbjct: 104 QIRKQVEFYFSDSNLPMDKFLLSKVGGSANNAVPLELLHSFKRMRRFQPFSAIVEALKTA 163
Query: 171 KLLEVTEDGTKVRRTVVVQDKPDVDEC-------------TIYVEKLPPEAEHDY----I 213
+ +E+TE+ T V+R V + + D + +IY + AE I
Sbjct: 164 ENVELTENDTAVKRKVPLPESVDEHDSKAIKVFEDASMARSIYAKGFGFGAEEPTTQLDI 223
Query: 214 ESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNP 261
E++F+ YG + L + + KG FVEF ++E+ L L P
Sbjct: 224 EALFAPYGPTNAIRLRRTHNDKTFKGSIFVEFESEEKQKAFLALEKKP 271
>gi|126660168|ref|ZP_01731286.1| RNA binding protein [Cyanothece sp. CCY0110]
gi|126618533|gb|EAZ89284.1| RNA binding protein [Cyanothece sp. CCY0110]
Length = 98
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 35/59 (59%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
TIYV L + + + VFS+YG V VSLP + TG+ +GF FVE + +E A+E
Sbjct: 2 TIYVGNLVYDVTSEDLTEVFSEYGTVKRVSLPTDRETGRPRGFGFVEMESDDEETAAIE 60
>gi|315052346|ref|XP_003175547.1| hypothetical protein MGYG_03072 [Arthroderma gypseum CBS 118893]
gi|311340862|gb|EFR00065.1| hypothetical protein MGYG_03072 [Arthroderma gypseum CBS 118893]
Length = 782
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 197 CTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
IYV+ + + + S+F KYG++T +L + TGK +GF FV FS E A+ A+E
Sbjct: 239 TNIYVKNVEQDVTDEEFRSLFEKYGEITSATLSRDNETGKSRGFGFVNFSDHEAASAAVE 298
Query: 257 LGLN 260
GLN
Sbjct: 299 -GLN 301
>gi|1666299|emb|CAA63557.1| RNA-binding protein [Anabaena variabilis]
Length = 102
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 36/59 (61%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
+IYV L E + ++ VF++YG V V +P+ + TG+ +GFAFVE T E A+E
Sbjct: 2 SIYVGNLSYEVTENDLKGVFAEYGTVKRVQVPQDRETGRPRGFAFVEMGTDAEEDAAIE 60
>gi|334118436|ref|ZP_08492525.1| RNP-1 like RNA-binding protein [Microcoleus vaginatus FGP-2]
gi|333459443|gb|EGK88056.1| RNP-1 like RNA-binding protein [Microcoleus vaginatus FGP-2]
Length = 136
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Query: 193 DVDECT--IYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFS 246
D EC+ IYV L E +++ F +YG V + LP + TG+++GFAFVE S
Sbjct: 27 DSGECSMSIYVGNLSYEVTQEHLSQTFGEYGTVKRIQLPADRETGRMRGFAFVEMS 82
>gi|67923265|ref|ZP_00516750.1| RNA-binding region RNP-1 (RNA recognition motif) [Crocosphaera
watsonii WH 8501]
gi|67854891|gb|EAM50165.1| RNA-binding region RNP-1 (RNA recognition motif) [Crocosphaera
watsonii WH 8501]
Length = 94
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 38/59 (64%)
Query: 197 CTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKAL 255
+IYV L + + +E VF++YG V V +PK + +G+++GFAFVE + ++ +A+
Sbjct: 1 MSIYVGNLSYDVNKEDLEEVFTEYGSVKRVHIPKDRESGRMRGFAFVEMDSDDQEQEAI 59
>gi|428207498|ref|YP_007091851.1| RNP-1 like RNA-binding protein [Chroococcidiopsis thermalis PCC
7203]
gi|428009419|gb|AFY87982.1| RNP-1 like RNA-binding protein [Chroococcidiopsis thermalis PCC
7203]
Length = 98
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 35/59 (59%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
+IYV L E + + + F++YG V V LP + TG+++GFAFVE T E A++
Sbjct: 2 SIYVGNLSYEVTQEDLSAAFAEYGSVKRVQLPTDRETGRMRGFAFVEMDTDTEETAAID 60
>gi|427701549|ref|YP_007044771.1| RRM domain-containing RNA-binding protein [Cyanobium gracile PCC
6307]
gi|427344717|gb|AFY27430.1| RRM domain-containing RNA-binding protein [Cyanobium gracile PCC
6307]
Length = 96
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 38/59 (64%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
TIYV L +AE D + +F++YG + SLP + TG+ +GFAFVE + + + KA++
Sbjct: 2 TIYVGNLSFDAEVDDLNHLFAQYGALRNCSLPLDRETGRKRGFAFVEMANEADETKAID 60
>gi|387915274|gb|AFK11246.1| eukaryotic translation initiation factor 3 subunit g [Callorhinchus
milii]
Length = 288
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%)
Query: 178 DGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKL 237
DG R + ++ D TI V L + ++ +F +G ++ + L K K+TG+
Sbjct: 188 DGANRRGESMQTNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKNTGQS 247
Query: 238 KGFAFVEFSTKEEAAKAL 255
KGFAF+ F +E+AA+A+
Sbjct: 248 KGFAFISFHRREDAARAI 265
>gi|221132804|ref|XP_002167622.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Hydra
magnipapillata]
Length = 161
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 195 DECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKA 254
D +Y+ +L A+ +E +F KYG V VS+ K + T + +GFAFVEF ++E+A A
Sbjct: 3 DAGKLYIGQLDYNADERDLEDLFGKYGTVVKVSIIKDRETQRPRGFAFVEFDSEEDAEAA 62
Query: 255 LELGLN 260
++ G N
Sbjct: 63 ID-GCN 67
>gi|452979604|gb|EME79366.1| hypothetical protein MYCFIDRAFT_212200 [Pseudocercospora fijiensis
CIRAD86]
Length = 294
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 38/62 (61%)
Query: 195 DECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKA 254
D T+ V + AE + +F +YG+VT V L K + TG+ KGFAFV ++ + +AA+A
Sbjct: 211 DLATLRVTNVSEFAEEGDLRDMFERYGRVTRVFLAKDRETGRAKGFAFVSYADRSDAARA 270
Query: 255 LE 256
E
Sbjct: 271 CE 272
>gi|406866605|gb|EKD19644.1| La domain-containing protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 499
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 74/166 (44%), Gaps = 27/166 (16%)
Query: 113 IMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN--KLARLTHDPDDVVKALRKS 170
I +EFY DSNL D++ L + V + C+ ++ R +VV ALR S
Sbjct: 167 IRAQVEFYFCDSNLPTDKYLWGLTDGASNRPVPIATICSFGRMKRFQPQ-SNVVAALRGS 225
Query: 171 KLLEVT--EDGTKVRRTVVVQDKPDVDECTIYVEKLP------------PEAEHDYIESV 216
LEV+ E G +V R V D T + +P P ++ D IE+
Sbjct: 226 SFLEVSGPEGGEQVNRKVAY------DPTTPASKSIPRSIYAKGFGDEEPSSQFD-IEAF 278
Query: 217 FSKYGKVTYVSLPKFKSTGKL-KGFAFVEFSTKEEAAKALELGLNP 261
F+ YG V L ++ KL KG FVEF +E A K ++L P
Sbjct: 279 FAPYGPTRSVRL--RRTDDKLFKGSVFVEFEDEETAEKFMKLDPKP 322
>gi|241622203|ref|XP_002408913.1| RNA-binding protein musashi, putative [Ixodes scapularis]
gi|215503069|gb|EEC12563.1| RNA-binding protein musashi, putative [Ixodes scapularis]
Length = 266
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 188 VQDKPDVDE-CTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFS 246
V KP VD+ +++V LP E + + + + FS+ G+VT V + + + TG KGF FV FS
Sbjct: 141 VGKKPQVDDRKSVFVGNLPHEVQDEELWNCFSECGQVTGVRVIRDRETGMGKGFGFVTFS 200
Query: 247 TKEEAAKALEL 257
+ AA ALE+
Sbjct: 201 KLDAAALALEM 211
>gi|290563184|ref|NP_001166854.1| sex-lethal isoform S [Bombyx mori]
gi|89885657|dbj|BAE86939.1| sex-lethal [Bombyx mori]
Length = 290
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 38/63 (60%)
Query: 193 DVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAA 252
D+ E +YV LP D +E++F KYG++ + + K++G +G AFV + +EEA
Sbjct: 99 DIKETNLYVTNLPRAITDDQLETIFGKYGRIVQKHILRDKNSGTPRGVAFVRYDKREEAQ 158
Query: 253 KAL 255
+A+
Sbjct: 159 EAI 161
>gi|403215673|emb|CCK70172.1| hypothetical protein KNAG_0D04260 [Kazachstania naganishii CBS
8797]
Length = 276
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 75/162 (46%), Gaps = 21/162 (12%)
Query: 111 QQIMNLMEFYLSDSNLRKDRFFSQLLQES----PEIEVSVFLKCNKLARLTHDPDDVVKA 166
+Q + +EFY S+ N D+F +++ P ++ F + K + D +V+
Sbjct: 34 KQCLKQVEFYFSEFNFPYDKFLRTTAEKNDGWVPIGTIATFNRMKKFRPI----DKLVEI 89
Query: 167 LRKSKLLEVTEDGTKVRRTVVVQ------DKPDVDECTIYVEKLPPEAE------HDYIE 214
LR S LLEV+EDG V+R V + D+ + + T+ V +P E + +E
Sbjct: 90 LRDSALLEVSEDGENVKRRVPLDSTKSTGDRVEQSKRTVVVMNIPHTPETIISELQEKVE 149
Query: 215 SVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
F K V V L K + G A VEF+T E+ K +E
Sbjct: 150 DFFQKVENVAQVRL-KRDRRRRFHGIAMVEFATAEDCEKFVE 190
>gi|260791605|ref|XP_002590819.1| hypothetical protein BRAFLDRAFT_125729 [Branchiostoma floridae]
gi|229276016|gb|EEN46830.1| hypothetical protein BRAFLDRAFT_125729 [Branchiostoma floridae]
Length = 1516
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 78/164 (47%), Gaps = 22/164 (13%)
Query: 108 QLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVK 165
+L +I+ +EFY SD+N+ KD F + ++ + E + + + K+ LT D V
Sbjct: 1078 ELKDKIIKQVEFYFSDANILKDAFLLKHVRRNKEGLVNIKLITSFRKVKSLTKDWRAVAY 1137
Query: 166 ALRKSKLLEVTEDGTKVRRTVVVQDKPDVDEC----TIYVEKLPPEAEHDYIESV---FS 218
+L++++ L + E+GTKV R + PD DE TI L E+ IE V FS
Sbjct: 1138 SLKQAESLRLNEEGTKVGRKEPL---PDYDETTPSRTIVAMNL--GVENPTIEKVSAMFS 1192
Query: 219 KYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNPC 262
G++ + + ++ + ++ ++ ELG N C
Sbjct: 1193 HCGEIALIRI--------IRPGGMIPQDVRKHMSRHPELGNNVC 1228
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
+EFY SD+N+ KD F + ++ + E + + + K+ LT D V +L++++ L
Sbjct: 1087 VEFYFSDANILKDAFLLKHVRRNKEGLVNIKLITSFRKVKSLTKDWRAVAYSLKQAESLR 1146
Query: 59 VTEDGTKV 66
+ E+GTKV
Sbjct: 1147 LNEEGTKV 1154
>gi|118601840|ref|NP_001073091.1| eukaryotic translation initiation factor 3 subunit G [Bos taurus]
gi|110279016|sp|Q3ZC12.1|EIF3G_BOVIN RecName: Full=Eukaryotic translation initiation factor 3 subunit G;
Short=eIF3g; AltName: Full=Eukaryotic translation
initiation factor 3 RNA-binding subunit; Short=eIF-3
RNA-binding subunit; AltName: Full=Eukaryotic
translation initiation factor 3 subunit 4; AltName:
Full=eIF-3-delta; AltName: Full=eIF3 p42; AltName:
Full=eIF3 p44
gi|73586725|gb|AAI02985.1| Eukaryotic translation initiation factor 3, subunit G [Bos taurus]
Length = 320
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%)
Query: 178 DGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKL 237
DG R + ++ D TI V L + ++ +F +G ++ + L K K+TG+
Sbjct: 220 DGASRRGESMQPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQS 279
Query: 238 KGFAFVEFSTKEEAAKAL 255
KGFAF+ F +E+AA+A+
Sbjct: 280 KGFAFISFHRREDAARAI 297
>gi|336383403|gb|EGO24552.1| hypothetical protein SERLADRAFT_468047 [Serpula lacrymans var.
lacrymans S7.9]
Length = 274
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 40/71 (56%)
Query: 177 EDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGK 236
+D T RR + KP D+ IY+ +LP D + FS++G VT + L + K TG+
Sbjct: 99 DDATIKRRLEKAKRKPTEDKGVIYIGRLPHGFFEDQLRGYFSQFGDVTRLRLSRNKKTGR 158
Query: 237 LKGFAFVEFST 247
K +AF+EF +
Sbjct: 159 SKHYAFLEFDS 169
>gi|224072369|ref|XP_002303703.1| predicted protein [Populus trichocarpa]
gi|222841135|gb|EEE78682.1| predicted protein [Populus trichocarpa]
Length = 784
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 38/63 (60%)
Query: 194 VDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAK 253
++ C ++V LP A D +E FSK+G ++ V L K T + KG A++ ++ E AA+
Sbjct: 260 LETCRLFVRNLPYTAIEDELEEHFSKFGNISQVHLVVDKDTKRSKGLAYIHYTLPESAAR 319
Query: 254 ALE 256
ALE
Sbjct: 320 ALE 322
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 193 DVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLP-KFKSTGKLKGFAFVEFSTKEEA 251
D + V + EA + +F +G++ + LP KF G +GFAFVE+ TK+EA
Sbjct: 674 DKSSTKLLVRNVAFEATEKDLRQLFGPFGQIKSLRLPMKF---GNHRGFAFVEYVTKQEA 730
Query: 252 AKALE 256
AL+
Sbjct: 731 QNALQ 735
>gi|254424963|ref|ZP_05038681.1| RNA-binding protein, putative [Synechococcus sp. PCC 7335]
gi|196192452|gb|EDX87416.1| RNA-binding protein, putative [Synechococcus sp. PCC 7335]
Length = 92
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 26/62 (41%), Positives = 41/62 (66%), Gaps = 3/62 (4%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEF---STKEEAAKA 254
+IYV L A+ + +E VF +YG V ++LP + TG+ +GFAFVE +T+E+A +A
Sbjct: 2 SIYVGNLSYSAKEEDLEGVFGEYGTVKRITLPTDRETGRPRGFAFVEMEEDATEEKAIEA 61
Query: 255 LE 256
L+
Sbjct: 62 LD 63
>gi|89885655|dbj|BAE86938.1| sex-lethal [Bombyx mori]
Length = 336
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 38/63 (60%)
Query: 193 DVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAA 252
D+ E +YV LP D +E++F KYG++ + + K++G +G AFV + +EEA
Sbjct: 145 DIKETNLYVTNLPRAITDDQLETIFGKYGRIVQKHILRDKNSGTPRGVAFVRYDKREEAQ 204
Query: 253 KAL 255
+A+
Sbjct: 205 EAI 207
>gi|443319940|ref|ZP_21049081.1| RRM domain-containing RNA-binding protein [Gloeocapsa sp. PCC
73106]
gi|442790348|gb|ELR99940.1| RRM domain-containing RNA-binding protein [Gloeocapsa sp. PCC
73106]
Length = 98
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 26/59 (44%), Positives = 33/59 (55%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
+IYV L + ++ VF YGKV V LP TGKL+GF FVE T E+ A+E
Sbjct: 2 SIYVGNLSYNVTQEELKEVFEDYGKVKRVYLPTDPETGKLRGFGFVEMETDEQEDAAIE 60
>gi|18406414|ref|NP_566004.1| RNA-binding protein [Arabidopsis thaliana]
gi|14030639|gb|AAK52994.1|AF375410_1 At2g43970/F6E13.10 [Arabidopsis thaliana]
gi|14194143|gb|AAK56266.1|AF367277_1 At2g43970/F6E13.10 [Arabidopsis thaliana]
gi|12744919|gb|AAK06847.1| VirF-interacting protein FIP1 [Arabidopsis thaliana]
gi|15810399|gb|AAL07087.1| unknown protein [Arabidopsis thaliana]
gi|20197078|gb|AAC23405.2| expressed protein [Arabidopsis thaliana]
gi|22136548|gb|AAM91060.1| At2g43970/F6E13.10 [Arabidopsis thaliana]
gi|330255262|gb|AEC10356.1| RNA-binding protein [Arabidopsis thaliana]
Length = 545
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 22/167 (13%)
Query: 111 QQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALR 168
Q+I+N +E+Y SD NL + + + PE + + V K+ + ++ + L+
Sbjct: 195 QKIVNQVEYYFSDLNLATTDHLMRFICKDPEGYVPIHVVASFKKIKAVINNNSQLAAVLQ 254
Query: 169 KSKLLEVTEDGTKVRRTVVVQDKP--DVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYV 226
S L V+EDG KVRR + + ++ I E LP + + + +FS G V +
Sbjct: 255 NSAKLFVSEDGKKVRRISPITESAIEELQSRIIVAENLPEDHCYQNLMKIFSTVGSVKNI 314
Query: 227 -----------SLPKFKSTGKLKG-------FAFVEFSTKEEAAKAL 255
+ P +S K G AFVE+ E A +A+
Sbjct: 315 RTCQPQNNGSGAPPAARSAAKSDGTLFSNKVHAFVEYEIVELAERAV 361
>gi|365986018|ref|XP_003669841.1| hypothetical protein NDAI_0D02840 [Naumovozyma dairenensis CBS 421]
gi|343768610|emb|CCD24598.1| hypothetical protein NDAI_0D02840 [Naumovozyma dairenensis CBS 421]
Length = 426
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 38/67 (56%)
Query: 190 DKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKE 249
D P T+++ L A+ D I FSKYG++ V +P T + KGF +V+FS E
Sbjct: 263 DVPSEPSDTLFLGNLSFNADKDNIYETFSKYGEIISVRIPTHPETEQPKGFGYVQFSNIE 322
Query: 250 EAAKALE 256
+A KALE
Sbjct: 323 DAKKALE 329
>gi|428221393|ref|YP_007105563.1| RRM domain-containing RNA-binding protein [Synechococcus sp. PCC
7502]
gi|427994733|gb|AFY73428.1| RRM domain-containing RNA-binding protein [Synechococcus sp. PCC
7502]
Length = 96
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 35/59 (59%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
TIYV L +A + + VF+ YGKV V LP + TG+++GFAFV+ + A+E
Sbjct: 2 TIYVGNLSYQASQEDLMEVFNDYGKVKRVQLPTDRETGRMRGFAFVDMEEDSQETAAIE 60
>gi|414591325|tpg|DAA41896.1| TPA: hypothetical protein ZEAMMB73_789693 [Zea mays]
Length = 470
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 72/164 (43%), Gaps = 20/164 (12%)
Query: 112 QIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRK 169
+I +E+Y SD NL + + + PE + +SV K+ L + ALR
Sbjct: 118 KIRKQVEYYFSDINLATTEHLMRFISKDPEGYVPISVVAGFKKIKALVQSNSMLASALRT 177
Query: 170 SKLLEVTEDGTKVRR--TVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYV- 226
S L V++DG +V+R D ++ + E LP + + + +FS G V +
Sbjct: 178 SSKLVVSDDGARVKREQPFTESDLEELQARIVVAENLPDDHCYQNLMRLFSVVGSVRTIR 237
Query: 227 ---------SLPKFKSTGKL------KGFAFVEFSTKEEAAKAL 255
+ P + KL K AFVE+ T E+AA+A+
Sbjct: 238 TCYPQTPNGTGPATNRSAKLDMLFANKLHAFVEYDTIEDAARAI 281
Score = 37.7 bits (86), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
+E+Y SD NL + + + PE + +SV K+ L + ALR S L
Sbjct: 123 VEYYFSDINLATTEHLMRFISKDPEGYVPISVVAGFKKIKALVQSNSMLASALRTSSKLV 182
Query: 59 VTEDGTKVK 67
V++DG +VK
Sbjct: 183 VSDDGARVK 191
>gi|357156974|ref|XP_003577639.1| PREDICTED: uncharacterized protein LOC100842995 [Brachypodium
distachyon]
Length = 488
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 73/168 (43%), Gaps = 22/168 (13%)
Query: 109 LYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKA 166
+ +I +E+Y SD NL + + + PE + +SV K+ L + A
Sbjct: 133 VVHKITKQVEYYFSDINLATTEHLMRFITKDPEGYVPISVVASFKKIKALVQSNSMLASA 192
Query: 167 LRKSKLLEVTEDGTKVRRTVVVQDKPDVDECT---IYVEKLPPEAEHDYIESVFSKYGKV 223
LR S L VTEDG +V+R + D++E + E LP + + + +FS G V
Sbjct: 193 LRTSSKLVVTEDGNRVKREQPFTES-DLEELQARIVVAENLPDDHCYQNLMKIFSAVGSV 251
Query: 224 TYV----------SLPKFKSTGKL------KGFAFVEFSTKEEAAKAL 255
+ + P + KL K AFVE+ T + A KA+
Sbjct: 252 KTIRTCYPQTPNGTGPVTNRSAKLDMLFANKLHAFVEYDTIDGAEKAI 299
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
+E+Y SD NL + + + PE + +SV K+ L + ALR S L
Sbjct: 141 VEYYFSDINLATTEHLMRFITKDPEGYVPISVVASFKKIKALVQSNSMLASALRTSSKLV 200
Query: 59 VTEDGTKVK 67
VTEDG +VK
Sbjct: 201 VTEDGNRVK 209
>gi|297820836|ref|XP_002878301.1| hypothetical protein ARALYDRAFT_907506 [Arabidopsis lyrata subsp.
lyrata]
gi|297324139|gb|EFH54560.1| hypothetical protein ARALYDRAFT_907506 [Arabidopsis lyrata subsp.
lyrata]
Length = 403
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 71/163 (43%), Gaps = 18/163 (11%)
Query: 111 QQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALR 168
Q+I+N +E+Y SD NL + P+ + + + NK+ + + L+
Sbjct: 130 QKIVNQVEYYFSDLNLATTDLLMGFISNDPQGYVPMHIVASFNKIKSSINSNSQLATVLQ 189
Query: 169 KSKLLEVTEDGTKVRRTVVVQDKP--DVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYV 226
S L V+EDG +VRR + + ++ + E LP + + + +FS G V ++
Sbjct: 190 NSSKLVVSEDGKRVRRLYPITESALEELQSRIVVAENLPEDHCYQNLLKIFSAVGSVKHI 249
Query: 227 --SLPKFKSTGKL------------KGFAFVEFSTKEEAAKAL 255
S P+ +G K AFVE+ E A KA+
Sbjct: 250 RTSQPQNSGSGPPSAARSAKTDFSNKVHAFVEYERVELAEKAV 292
>gi|427702215|ref|YP_007045437.1| RRM domain-containing RNA-binding protein [Cyanobium gracile PCC
6307]
gi|427345383|gb|AFY28096.1| RRM domain-containing RNA-binding protein [Cyanobium gracile PCC
6307]
Length = 140
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 36/59 (61%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
TIYV L +AE + + +F +YG+V SLP + TG+ +GFAF+E + KA++
Sbjct: 2 TIYVGNLSFQAEREDLLDLFGQYGEVRQCSLPLDRETGRKRGFAFIELADDASEQKAID 60
>gi|440891548|gb|ELR45164.1| Eukaryotic translation initiation factor 3 subunit G, partial [Bos
grunniens mutus]
Length = 287
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%)
Query: 178 DGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKL 237
DG R + ++ D TI V L + ++ +F +G ++ + L K K+TG+
Sbjct: 191 DGASRRGESMQPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQS 250
Query: 238 KGFAFVEFSTKEEAAKAL 255
KGFAF+ F +E+AA+A+
Sbjct: 251 KGFAFISFHRREDAARAI 268
>gi|338715494|ref|XP_001489531.3| PREDICTED: MKI67 FHA domain-interacting nucleolar
phosphoprotein-like [Equus caballus]
Length = 315
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 39/68 (57%)
Query: 189 QDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTK 248
Q+K + IYV LPP I++ FS++G VT L + K TG KG+AF+EF ++
Sbjct: 62 QEKKKLTPGVIYVGHLPPALYETQIKAYFSQFGTVTRFRLSRSKKTGNSKGYAFLEFESE 121
Query: 249 EEAAKALE 256
+ A A E
Sbjct: 122 DVAKIAAE 129
>gi|440789720|gb|ELR11019.1| RNA binding protein, putative [Acanthamoeba castellanii str. Neff]
Length = 838
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 197 CTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
CTI V+ + EA I +F+ +G++ V +PK K G+ +GFAFV+F TK+EA A +
Sbjct: 745 CTILVKNVAFEATKAEIRELFATFGQLKSVRVPK-KMDGRARGFAFVDFITKQEAKNAFQ 803
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%)
Query: 195 DECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKA 254
D ++V LP A D + +F K+G ++ V +P + T K +G A+V F E AA+A
Sbjct: 325 DTGRLFVRNLPFSASEDDLYKLFKKHGDISEVHIPIDRETKKPRGMAYVTFMLPEVAAQA 384
>gi|434407004|ref|YP_007149889.1| RRM domain-containing RNA-binding protein [Cylindrospermum stagnale
PCC 7417]
gi|428261259|gb|AFZ27209.1| RRM domain-containing RNA-binding protein [Cylindrospermum stagnale
PCC 7417]
Length = 104
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 31/49 (63%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFS 246
+IYV L E D + +VF++YG V V LP + TG+L+GFAFVE
Sbjct: 2 SIYVGNLSYEVTSDTLSAVFAEYGSVKRVQLPTDRETGRLRGFAFVEMG 50
>gi|346974495|gb|EGY17947.1| polyadenylate-binding protein [Verticillium dahliae VdLs.17]
Length = 759
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 197 CTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
+YV+ + EA D +F+KYG+VT SL + GK +GF FV F+T E A++A+E
Sbjct: 242 TNVYVKNINSEASDDEFRDLFTKYGEVTSSSLAR-DQEGKSRGFGFVNFTTHEAASQAVE 300
>gi|126656762|ref|ZP_01727976.1| RNA-binding region RNP-1 [Cyanothece sp. CCY0110]
gi|126621982|gb|EAZ92690.1| RNA-binding region RNP-1 [Cyanothece sp. CCY0110]
Length = 83
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 26/59 (44%), Positives = 33/59 (55%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
+IYV LP E + VFS YG V V +P + TG+ +GFAFVE TK A+E
Sbjct: 2 SIYVGNLPYEVTEADLNFVFSDYGSVKRVHVPTDRDTGRPRGFAFVELETKANEFNAIE 60
>gi|358334644|dbj|GAA27787.2| La-related protein 6 [Clonorchis sinensis]
Length = 336
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 80/186 (43%), Gaps = 31/186 (16%)
Query: 112 QIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRK 169
QI EFY SD+N+ KD+F ++ S + +++ + K K+ RLT D VV+AL
Sbjct: 7 QIREQCEFYFSDANILKDQFMLNQVKSSTDGWVKLGIIEKFKKVQRLTQDHSVVVRALSM 66
Query: 170 SKLLEVTEDG------------TKVRRTVVVQDKPDVDECTIYVEKLPPEAE--HDYIES 215
S LE++EDG + RR + P V TI + LP + E H +
Sbjct: 67 SSKLELSEDGMPNNVFHWFLGLSVRRRDPLPSWDPSVYHRTIILTDLPEDVELNHAKVTE 126
Query: 216 VFS---KYGKVTYVSLPKFKSTGKLKG------------FAFVEFSTKEEAAKALELGLN 260
+F+ + + LP K LK A +EF+ + A+KA+
Sbjct: 127 LFTTDQASPLLVRLFLPGRKVPSDLKRSQALHPQLGTKFSAVIEFANRTLASKAISRARQ 186
Query: 261 PCPPDY 266
P Y
Sbjct: 187 HWPDAY 192
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 45/76 (59%), Gaps = 4/76 (5%)
Query: 2 EFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEV 59
EFY SD+N+ KD+F ++ S + +++ + K K+ RLT D VV+AL S LE+
Sbjct: 13 EFYFSDANILKDQFMLNQVKSSTDGWVKLGIIEKFKKVQRLTQDHSVVVRALSMSSKLEL 72
Query: 60 TEDGTKVKGNIIRHFL 75
+EDG + N+ FL
Sbjct: 73 SEDG--MPNNVFHWFL 86
>gi|156102392|ref|XP_001616889.1| RNA binding protein [Plasmodium vivax Sal-1]
gi|148805763|gb|EDL47162.1| RNA binding protein, putative [Plasmodium vivax]
Length = 119
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 38/63 (60%)
Query: 194 VDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAK 253
++ I + + EA DYI+ VF KYG++ + L + TG LKG+AF+EF +A +
Sbjct: 32 IEGWIIIITNIHGEARDDYIKDVFEKYGQIKNLHLNLDRRTGFLKGYAFLEFENFVDAKR 91
Query: 254 ALE 256
A++
Sbjct: 92 AID 94
>gi|390359786|ref|XP_003729564.1| PREDICTED: 29 kDa ribonucleoprotein B, chloroplastic-like
[Strongylocentrotus purpuratus]
Length = 220
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 5/75 (6%)
Query: 186 VVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEF 245
V+D P+ I+V LP + +E +F +GK++ V+L K K +G +GF F+ F
Sbjct: 9 AAVKDSPN----KIFVSNLPKTWDEGRMEKLFETFGKISQVNLMKNKESGDSRGFGFITF 64
Query: 246 STKEEAAKALELGLN 260
T E+A A++ G+N
Sbjct: 65 DTAEDANDAIQ-GMN 78
>gi|367052423|ref|XP_003656590.1| hypothetical protein THITE_135180 [Thielavia terrestris NRRL 8126]
gi|347003855|gb|AEO70254.1| hypothetical protein THITE_135180 [Thielavia terrestris NRRL 8126]
Length = 2006
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 30/79 (37%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 178 DGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLP-KFKSTGK 236
D + RR + K I ++ LP EA + ++FS+YGK+ + LP KF T
Sbjct: 711 DAAEERRREDLAKKAAAQRTKIVIKNLPFEASKKDVRNLFSEYGKLVALRLPKKFNHTS- 769
Query: 237 LKGFAFVEFSTKEEAAKAL 255
+GFAF EF+T EA AL
Sbjct: 770 -RGFAFAEFATPREALNAL 787
>gi|402085655|gb|EJT80553.1| polyadenylate-binding protein [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 773
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 38/60 (63%)
Query: 197 CTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
IYV+ + + D ++F K+G VT SL + + TGK +GF FV F++ E+A+KA+E
Sbjct: 242 TNIYVKNIQLDVTDDDFRALFEKFGHVTSSSLARDQETGKSRGFGFVNFTSHEDASKAVE 301
>gi|212543387|ref|XP_002151848.1| pre-mRNA splicing factor (Prp24), putative [Talaromyces marneffei
ATCC 18224]
gi|210066755|gb|EEA20848.1| pre-mRNA splicing factor (Prp24), putative [Talaromyces marneffei
ATCC 18224]
Length = 1275
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 64/139 (46%), Gaps = 15/139 (10%)
Query: 131 FFSQLLQESPEIEVSVF--LKCNKLARLTH----DPDDVVKALRKSKLLEVTEDG----T 180
F L E+ EI F LK N R + PD + A + V DG
Sbjct: 922 FIRSLFSEAGEIVEVRFPSLKYNTHRRFCYVQFKSPDQAIAATKLDN--NVVGDGLNLQV 979
Query: 181 KVRRTVVVQDK--PDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLK 238
K+ QD+ P +E I++ + +A + ++ +FSKYG + V +P K G+ +
Sbjct: 980 KISDPSARQDRQGPMYEEREIHISNIHFDARENDLKELFSKYGTIETVRIPS-KVNGEHR 1038
Query: 239 GFAFVEFSTKEEAAKALEL 257
GF F+ FS KEEA AL +
Sbjct: 1039 GFGFIVFSKKEEATAALAM 1057
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 197 CTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
T+YV PP A+ +I S+FS+ G++ V P K + F +V+F + ++A A +
Sbjct: 907 STVYVTNFPPTADEAFIRSLFSEAGEIVEVRFPSLKYNTHRR-FCYVQFKSPDQAIAATK 965
Query: 257 LGLN 260
L N
Sbjct: 966 LDNN 969
>gi|428210908|ref|YP_007084052.1| RRM domain-containing RNA-binding protein [Oscillatoria acuminata
PCC 6304]
gi|427999289|gb|AFY80132.1| RRM domain-containing RNA-binding protein [Oscillatoria acuminata
PCC 6304]
Length = 109
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%)
Query: 197 CTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
+IYV L + + SVF++YG V V+LP + TG+ +GF FVE T E A+E
Sbjct: 1 MSIYVGNLSYDVTEQDLNSVFAEYGTVKRVNLPTDRETGRPRGFGFVEMDTDAEETAAIE 60
>gi|30583983|gb|AAP36240.1| Homo sapiens eukaryotic translation initiation factor 3, subunit 4
delta, 44kDa [synthetic construct]
gi|61372605|gb|AAX43874.1| eukaryotic translation initiation factor 3 subunit 4 delta
[synthetic construct]
gi|61372608|gb|AAX43875.1| eukaryotic translation initiation factor 3 subunit 4 delta
[synthetic construct]
Length = 321
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%)
Query: 178 DGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKL 237
DG R + ++ D TI V L + ++ +F +G ++ + L K K+TG+
Sbjct: 220 DGASRRGESMQPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQS 279
Query: 238 KGFAFVEFSTKEEAAKAL 255
KGFAF+ F +E+AA+A+
Sbjct: 280 KGFAFISFHRREDAARAI 297
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.135 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,584,292,522
Number of Sequences: 23463169
Number of extensions: 185733696
Number of successful extensions: 562319
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 9384
Number of HSP's successfully gapped in prelim test: 4029
Number of HSP's that attempted gapping in prelim test: 539165
Number of HSP's gapped (non-prelim): 24304
length of query: 299
length of database: 8,064,228,071
effective HSP length: 141
effective length of query: 158
effective length of database: 9,050,888,538
effective search space: 1430040389004
effective search space used: 1430040389004
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 76 (33.9 bits)