BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3930
(299 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q28G87|LARP7_XENTR La-related protein 7 OS=Xenopus tropicalis GN=larp7 PE=2 SV=1
Length = 593
Score = 144 bits (364), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 81/189 (42%), Positives = 121/189 (64%), Gaps = 6/189 (3%)
Query: 79 SMETEA-SDNVDKDLSDLQRKD--GGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQL 135
++ET+ S+ V +D S RKD R R KQL I ++F+ D NL KDRF +
Sbjct: 3 AIETDTPSNKVKEDESTDLRKDREKKKRSRVKQLLADIAKQVDFWFGDVNLHKDRFLREQ 62
Query: 136 LQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLEVTEDGTKVRRTVVVQDKP- 192
++++ + I++S+ NK+ ++T D + +A++ S ++E+ GTK+RR + +KP
Sbjct: 63 IEKTRDGYIDISLLASFNKMKKITTDSKLIARAVKNSSVVEINLSGTKIRRRFPLGEKPQ 122
Query: 193 DVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAA 252
DVD T+YVE LP H +IE VF KYG V YVS+P++KSTG KGFAF+EF T+E+AA
Sbjct: 123 DVDSRTVYVELLPKNVTHSWIERVFGKYGMVVYVSIPRYKSTGDPKGFAFIEFETQEQAA 182
Query: 253 KALELGLNP 261
KA+E+ NP
Sbjct: 183 KAIEVLNNP 191
Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 44/69 (63%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
++F+ D NL KDRF + ++++ + I++S+ NK+ ++T D + +A++ S ++E
Sbjct: 44 VDFWFGDVNLHKDRFLREQIEKTRDGYIDISLLASFNKMKKITTDSKLIARAVKNSSVVE 103
Query: 59 VTEDGTKVK 67
+ GTK++
Sbjct: 104 INLSGTKIR 112
>sp|Q4R627|LARP7_MACFA La-related protein 7 OS=Macaca fascicularis GN=LARP7 PE=2 SV=1
Length = 581
Score = 141 bits (355), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 107/162 (66%), Gaps = 3/162 (1%)
Query: 103 RHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDP 160
R R KQ+ I ++F+ D+NL KDRF + +++S + +++S+ + NK+ +LT D
Sbjct: 28 RSRVKQVLADIAKQVDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDG 87
Query: 161 DDVVKALRKSKLLEVTEDGTKVRRTVVVQDKP-DVDECTIYVEKLPPEAEHDYIESVFSK 219
+ +ALR S ++E+ +GT++RR + ++P D DE T+YVE LP H +IE VF K
Sbjct: 88 KLIARALRSSAVVELDLEGTRIRRKKPLGERPKDEDERTVYVELLPKNVNHSWIERVFGK 147
Query: 220 YGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNP 261
G V Y+S+P +KSTG KGFAFVEF TKE+AAKA+E NP
Sbjct: 148 CGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIEFLNNP 189
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 47/69 (68%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
++F+ D+NL KDRF + +++S + +++S+ + NK+ +LT D + +ALR S ++E
Sbjct: 42 VDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALRSSAVVE 101
Query: 59 VTEDGTKVK 67
+ +GT+++
Sbjct: 102 LDLEGTRIR 110
>sp|Q4G0J3|LARP7_HUMAN La-related protein 7 OS=Homo sapiens GN=LARP7 PE=1 SV=1
Length = 582
Score = 141 bits (355), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 107/162 (66%), Gaps = 3/162 (1%)
Query: 103 RHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDP 160
R R KQ+ I ++F+ D+NL KDRF + +++S + +++S+ + NK+ +LT D
Sbjct: 28 RSRVKQVLADIAKQVDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDG 87
Query: 161 DDVVKALRKSKLLEVTEDGTKVRRTVVVQDKP-DVDECTIYVEKLPPEAEHDYIESVFSK 219
+ +ALR S ++E+ +GT++RR + ++P D DE T+YVE LP H +IE VF K
Sbjct: 88 KLIARALRSSAVVELDLEGTRIRRKKPLGERPKDEDERTVYVELLPKNVNHSWIERVFGK 147
Query: 220 YGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNP 261
G V Y+S+P +KSTG KGFAFVEF TKE+AAKA+E NP
Sbjct: 148 CGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIEFLNNP 189
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 47/69 (68%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
++F+ D+NL KDRF + +++S + +++S+ + NK+ +LT D + +ALR S ++E
Sbjct: 42 VDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALRSSAVVE 101
Query: 59 VTEDGTKVK 67
+ +GT+++
Sbjct: 102 LDLEGTRIR 110
>sp|Q7ZWE3|LARP7_DANRE La-related protein 7 OS=Danio rerio GN=larp7 PE=2 SV=1
Length = 555
Score = 139 bits (351), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 114/183 (62%), Gaps = 4/183 (2%)
Query: 86 DNVDKDLSDLQRKDGGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IE 143
D DLS+ + + R R KQL + +EF+ D NL KDRF ++++S + I+
Sbjct: 19 DTACADLSEKKDNEKKKRSRVKQLLSDVKKQVEFWFGDVNLHKDRFMKSIIEQSRDGYID 78
Query: 144 VSVFLKCNKLARLTHDPDDVVKALRKSKLLEVTEDGTKVRRTVVVQDKP-DVDECTIYVE 202
++V N++ LT D + +AL+ S ++EV ++GT++RR + + P DVD T+YVE
Sbjct: 79 IAVLTTFNRMKNLTADVKLIARALKNSTIVEVNDEGTRIRRKEPLGETPKDVDSRTVYVE 138
Query: 203 KLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNPC 262
LP H ++E VFSK G V Y+S+P++KST KGFAFVEF T+E+A KA+E+ NP
Sbjct: 139 LLPKTVTHIWLERVFSKCGHVVYISIPRYKSTRHSKGFAFVEFETQEQAQKAVEMLNNP- 197
Query: 263 PPD 265
P D
Sbjct: 198 PED 200
Score = 52.0 bits (123), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 45/69 (65%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
+EF+ D NL KDRF ++++S + I+++V N++ LT D + +AL+ S ++E
Sbjct: 50 VEFWFGDVNLHKDRFMKSIIEQSRDGYIDIAVLTTFNRMKNLTADVKLIARALKNSTIVE 109
Query: 59 VTEDGTKVK 67
V ++GT+++
Sbjct: 110 VNDEGTRIR 118
>sp|Q5XI01|LARP7_RAT La-related protein 7 OS=Rattus norvegicus GN=Larp7 PE=1 SV=2
Length = 571
Score = 134 bits (337), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 68/158 (43%), Positives = 105/158 (66%), Gaps = 3/158 (1%)
Query: 107 KQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVV 164
KQ+ I ++F+ D+NL KDRF + +++S + +++S+ + NK+ +LT D +
Sbjct: 27 KQVLADIAKQVDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIA 86
Query: 165 KALRKSKLLEVTEDGTKVRRTVVVQDKP-DVDECTIYVEKLPPEAEHDYIESVFSKYGKV 223
+AL+ S ++E+ +GT++RR + ++P D +E T+YVE LP H +IE VF K G V
Sbjct: 87 RALKSSSVVELDLEGTRIRRKKPLGERPKDEEERTVYVELLPKNVTHSWIERVFGKCGNV 146
Query: 224 TYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNP 261
Y+S+P +KSTG KGFAFVEF TKE+AAKA+E NP
Sbjct: 147 VYISIPHYKSTGDPKGFAFVEFETKEQAAKAIEFLNNP 184
Score = 48.1 bits (113), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 47/69 (68%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
++F+ D+NL KDRF + +++S + +++S+ + NK+ +LT D + +AL+ S ++E
Sbjct: 37 VDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALKSSSVVE 96
Query: 59 VTEDGTKVK 67
+ +GT+++
Sbjct: 97 LDLEGTRIR 105
>sp|Q05CL8|LARP7_MOUSE La-related protein 7 OS=Mus musculus GN=Larp7 PE=1 SV=2
Length = 570
Score = 132 bits (333), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/158 (42%), Positives = 105/158 (66%), Gaps = 3/158 (1%)
Query: 107 KQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVV 164
KQ+ I ++F+ D+NL KD+F + +++S + +++S+ + NK+ +LT D +
Sbjct: 26 KQVLADIAKQVDFWFGDANLHKDKFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIA 85
Query: 165 KALRKSKLLEVTEDGTKVRRTVVVQDKP-DVDECTIYVEKLPPEAEHDYIESVFSKYGKV 223
+AL+ S ++E+ +GT++RR + ++P D +E T+YVE LP H +IE VF K G V
Sbjct: 86 RALKSSSVVELDLEGTRIRRKKPLGERPKDEEERTVYVELLPKNVTHSWIERVFGKCGNV 145
Query: 224 TYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNP 261
Y+S+P +KSTG KGFAFVEF TKE+AAKA+E NP
Sbjct: 146 VYISIPHYKSTGDPKGFAFVEFETKEQAAKAIEFLNNP 183
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 47/69 (68%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE--IEVSVFLKCNKLARLTHDPDDVVKALRKSKLLE 58
++F+ D+NL KD+F + +++S + +++S+ + NK+ +LT D + +AL+ S ++E
Sbjct: 36 VDFWFGDANLHKDKFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALKSSSVVE 95
Query: 59 VTEDGTKVK 67
+ +GT+++
Sbjct: 96 LDLEGTRIR 104
>sp|P05455|LA_HUMAN Lupus La protein OS=Homo sapiens GN=SSB PE=1 SV=2
Length = 408
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 89/168 (52%), Gaps = 11/168 (6%)
Query: 99 DGGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLT 157
+ G + L +I + +E+Y D NL +D+F + ++ + + + + +K N+L RLT
Sbjct: 3 ENGDNEKMAALEAKICHQIEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLT 62
Query: 158 HDPDDVVKALRKSK--LLEVTEDGTKVRRT-------VVVQDKPDVDECTIYVEKLPPEA 208
D + +V+AL KSK L+E++ED TK+RR+ V + K DV ++Y++ P +A
Sbjct: 63 TDFNVIVEALSKSKAELMEISEDKTKIRRSPSKPLPEVTDEYKNDVKNRSVYIKGFPTDA 122
Query: 209 EHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
D I+ G+V + + + KG FV F + E A K +E
Sbjct: 123 TLDDIKEWLEDKGQVLNIQMRRTLHKA-FKGSIFVVFDSIESAKKFVE 169
Score = 48.5 bits (114), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 47/70 (67%), Gaps = 3/70 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--LL 57
+E+Y D NL +D+F + ++ + + + + +K N+L RLT D + +V+AL KSK L+
Sbjct: 21 IEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLTTDFNVIVEALSKSKAELM 80
Query: 58 EVTEDGTKVK 67
E++ED TK++
Sbjct: 81 EISEDKTKIR 90
>sp|P10881|LA_BOVIN Lupus La protein homolog OS=Bos taurus GN=SSB PE=2 SV=2
Length = 404
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 88/168 (52%), Gaps = 11/168 (6%)
Query: 99 DGGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLT 157
+ G + L +I + +E+Y D NL +D+F + ++ + + + + +K N+L RLT
Sbjct: 3 ENGDNEKMAALEAKICHQIEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLT 62
Query: 158 HDPDDVVKALRKSK--LLEVTEDGTKVRRT-------VVVQDKPDVDECTIYVEKLPPEA 208
D + +V+AL KSK L+E++ED TK+RR+ V + K DV ++Y++ P +A
Sbjct: 63 TDFNVIVEALSKSKAELMEISEDKTKIRRSPSKPLPEVTDEYKNDVKNRSVYIKGFPTDA 122
Query: 209 EHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
D I+ G+V + + + KG F F + E A K +E
Sbjct: 123 ALDDIKEWLEDKGQVLNIQMRRTLHKA-FKGSIFAVFDSIESAKKFVE 169
Score = 48.5 bits (114), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 47/70 (67%), Gaps = 3/70 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--LL 57
+E+Y D NL +D+F + ++ + + + + +K N+L RLT D + +V+AL KSK L+
Sbjct: 21 IEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLTTDFNVIVEALSKSKAELM 80
Query: 58 EVTEDGTKVK 67
E++ED TK++
Sbjct: 81 EISEDKTKIR 90
>sp|P32067|LA_MOUSE Lupus La protein homolog OS=Mus musculus GN=Ssb PE=2 SV=1
Length = 415
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 84/159 (52%), Gaps = 11/159 (6%)
Query: 109 LYQQIMNLMEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKAL 167
L +I + +E+Y D NL +D+F + ++ + + + +K N+L RLT D + +V+AL
Sbjct: 13 LEAKICHQIEYYFGDFNLPRDKFLKEQIKLDEGWVPLETMIKFNRLNRLTTDFNVIVQAL 72
Query: 168 RKS--KLLEVTEDGTKVRRT-------VVVQDKPDVDECTIYVEKLPPEAEHDYIESVFS 218
KS KL+EV+ D TK+RR+ V + K DV ++Y++ P +A D I+
Sbjct: 73 SKSKAKLMEVSADKTKIRRSPSRPLPEVTDEYKNDVKNRSVYIKGFPTDATLDDIKEWLD 132
Query: 219 KYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALEL 257
G++ + + + KG F F + + A K +E+
Sbjct: 133 DKGQILNIQMRRTLHK-TFKGSIFAVFDSIQSAKKFVEI 170
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 45/70 (64%), Gaps = 3/70 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKALRKS--KLL 57
+E+Y D NL +D+F + ++ + + + +K N+L RLT D + +V+AL KS KL+
Sbjct: 21 IEYYFGDFNLPRDKFLKEQIKLDEGWVPLETMIKFNRLNRLTTDFNVIVQALSKSKAKLM 80
Query: 58 EVTEDGTKVK 67
EV+ D TK++
Sbjct: 81 EVSADKTKIR 90
>sp|P38656|LA_RAT Lupus La protein homolog OS=Rattus norvegicus GN=Ssb PE=2 SV=1
Length = 415
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 81/155 (52%), Gaps = 11/155 (7%)
Query: 109 LYQQIMNLMEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKAL 167
L +I + +E+Y D NL +D+F + ++ + + + +K N+L RLT D + +V+AL
Sbjct: 13 LEAKICHQIEYYFGDFNLPRDKFLKEQIKLDEGWVPLETMIKFNRLNRLTTDFNVIVQAL 72
Query: 168 RKSK--LLEVTEDGTKVRRT-------VVVQDKPDVDECTIYVEKLPPEAEHDYIESVFS 218
KSK L+EV+ D TK+RR+ V + K DV ++Y++ P +A D I+
Sbjct: 73 SKSKANLMEVSADKTKIRRSPSRPLPEVTDEYKNDVKNRSVYIKGFPTDATLDDIKEWLD 132
Query: 219 KYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAK 253
G++ + + + KG F F + + A K
Sbjct: 133 DKGQILNIQMRRTLHK-TFKGSIFAVFDSIQSAKK 166
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 45/70 (64%), Gaps = 3/70 (4%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQ-ESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--LL 57
+E+Y D NL +D+F + ++ + + + +K N+L RLT D + +V+AL KSK L+
Sbjct: 21 IEYYFGDFNLPRDKFLKEQIKLDEGWVPLETMIKFNRLNRLTTDFNVIVQALSKSKANLM 80
Query: 58 EVTEDGTKVK 67
EV+ D TK++
Sbjct: 81 EVSADKTKIR 90
>sp|P28048|LAA_XENLA Lupus La protein homolog A OS=Xenopus laevis GN=ssb-a PE=2 SV=1
Length = 428
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 88/168 (52%), Gaps = 11/168 (6%)
Query: 99 DGGGRHRKKQLYQQIMNLMEFYLSDSNLRKDRFF-SQLLQESPEIEVSVFLKCNKLARLT 157
+ G + +K +I +E+Y D NL +D+F Q+L + + + +K N+L++LT
Sbjct: 3 ENGDKEQKLDSDTKICEQIEYYFGDHNLPRDKFLKQQILLDDGWVPLETMIKFNRLSKLT 62
Query: 158 HDPDDVVKALRKSK--LLEVTEDGTKVRRTVV-----VQD--KPDVDECTIYVEKLPPEA 208
D + +++AL+KSK LLE+ E+ K+RR+ + D K + ++Y++ P A
Sbjct: 63 TDFNTILQALKKSKTELLEINEEKCKIRRSPAKPLPELNDEYKNSLKHKSVYIKGFPTSA 122
Query: 209 EHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
D ++ G + + + + + KG F+ F+T ++A K LE
Sbjct: 123 ILDDVKEWLKDKGPIENIQMRRTLQR-EFKGSIFIIFNTDDDAKKFLE 169
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 46/70 (65%), Gaps = 3/70 (4%)
Query: 1 MEFYLSDSNLRKDRFF-SQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--LL 57
+E+Y D NL +D+F Q+L + + + +K N+L++LT D + +++AL+KSK LL
Sbjct: 21 IEYYFGDHNLPRDKFLKQQILLDDGWVPLETMIKFNRLSKLTTDFNTILQALKKSKTELL 80
Query: 58 EVTEDGTKVK 67
E+ E+ K++
Sbjct: 81 EINEEKCKIR 90
>sp|P28049|LAB_XENLA Lupus La protein homolog B OS=Xenopus laevis GN=ssb-b PE=2 SV=1
Length = 427
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 87/159 (54%), Gaps = 13/159 (8%)
Query: 109 LYQQIMNLMEFYLSDSNLRKDRFF-SQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKAL 167
L +I +E+Y D NL +D+F Q+L ++ + + +K N+L++LT D + +++AL
Sbjct: 12 LDTKICEQIEYYFGDHNLPRDKFLKQQVLLDNGWVPLETMIKFNRLSKLTTDFNIILQAL 71
Query: 168 RKSK--LLEVTEDGTKVRRTVVVQDKPDVDE--------CTIYVEKLPPEAEHDYIESVF 217
+KSK LLE+ E+ K+RR+ + P+++E ++Y++ P D I+
Sbjct: 72 KKSKTELLEINEEKCKIRRS-PAKPLPELNEDYKNSFKHRSVYIKGFPTITNLDEIKEWL 130
Query: 218 SKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
+ G + + + + + KG F+ F+T++ A K LE
Sbjct: 131 NDKGPIENIQMRRTLQR-EFKGSVFLVFNTEDGAKKFLE 168
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 47/70 (67%), Gaps = 3/70 (4%)
Query: 1 MEFYLSDSNLRKDRFF-SQLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--LL 57
+E+Y D NL +D+F Q+L ++ + + +K N+L++LT D + +++AL+KSK LL
Sbjct: 20 IEYYFGDHNLPRDKFLKQQVLLDNGWVPLETMIKFNRLSKLTTDFNIILQALKKSKTELL 79
Query: 58 EVTEDGTKVK 67
E+ E+ K++
Sbjct: 80 EINEEKCKIR 89
>sp|Q26457|LA_AEDAL La protein homolog OS=Aedes albopictus PE=1 SV=1
Length = 383
Score = 58.2 bits (139), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 82/164 (50%), Gaps = 16/164 (9%)
Query: 108 QLYQQIMNLMEFYLSDSNLRKDRFFS-QLLQESPEIEVSVFLKCNKLARLTHDPDDVVKA 166
+L + +E+Y D+NL +D+F Q+ ++ + V V L +L L+ D +V A
Sbjct: 42 KLEASTIRQLEYYFGDANLARDKFLQEQISKDEGWVPVDVLLTFKRLKSLSEDKKVIVDA 101
Query: 167 LRKSK--LLEVTEDGTKVRR-------TVVVQDKPDVDECTIYVEKLPPEAEHDYIE--S 215
+ KS L+EV+ED K+RR + + ++ T+YV+ PE E
Sbjct: 102 IEKSDEGLIEVSEDREKLRRHPERPLPEQNEETRKEIYGRTVYVKGFAPEEGTQMSELLE 161
Query: 216 VFSKYGKVTYVSLPKF--KSTGK--LKGFAFVEFSTKEEAAKAL 255
F + K+T + + K+ K+T K KG FV F+TK+ A+ L
Sbjct: 162 FFEPFEKITNIVMRKYHDKATKKYLFKGSVFVTFATKDHCAEFL 205
Score = 42.4 bits (98), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 7/88 (7%)
Query: 1 MEFYLSDSNLRKDRFFS-QLLQESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--LL 57
+E+Y D+NL +D+F Q+ ++ + V V L +L L+ D +V A+ KS L+
Sbjct: 51 LEYYFGDANLARDKFLQEQISKDEGWVPVDVLLTFKRLKSLSEDKKVIVDAIEKSDEGLI 110
Query: 58 EVTEDGTKVKGNIIRHFLVPISMETEAS 85
EV+ED K++ RH P+ + E +
Sbjct: 111 EVSEDREKLR----RHPERPLPEQNEET 134
>sp|A4QUF0|PABP_MAGO7 Polyadenylate-binding protein, cytoplasmic and nuclear
OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 /
FGSC 8958) GN=PAB1 PE=3 SV=1
Length = 762
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 39/60 (65%)
Query: 197 CTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
IYV+ + PE D ++F KYG VT SL + + TGK +GF FV F++ E+A+KA++
Sbjct: 242 TNIYVKNINPEVTDDEFRTLFEKYGDVTSSSLARDQETGKSRGFGFVNFTSHEDASKAVQ 301
Score = 33.5 bits (75), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 32/60 (53%)
Query: 197 CTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
++YV +L P + +FS+ G V + + + T + G+A+V ++T + KALE
Sbjct: 61 ASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTADGEKALE 120
>sp|P40796|LA_DROME La protein homolog OS=Drosophila melanogaster GN=La PE=1 SV=2
Length = 390
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 81/159 (50%), Gaps = 15/159 (9%)
Query: 113 IMNLMEFYLSDSNLRKDRFFSQLL--QESPEIEVSVFLKCNKLARLTHDPDDVVKALRKS 170
I+ +E+Y D+NL +D+F + + E + +SV + +LA L+ D ++V AL KS
Sbjct: 54 IIRQVEYYFGDANLNRDKFLREQIGKNEDGWVPLSVLVTFKRLASLSTDLSEIVAALNKS 113
Query: 171 K--LLEVTEDGTKVRR-------TVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYG 221
+ L+E++ED +RR + + ++ E T Y + P +++ + + Y
Sbjct: 114 EEGLVEISEDKLSLRRHPERPIPEHNEERRKEIQERTAYAKGFPLDSQISELLDFAANYD 173
Query: 222 KVTYVSLPKF----KSTGKLKGFAFVEFSTKEEAAKALE 256
KV +++ K + K KG F+ F TK++A LE
Sbjct: 174 KVVNLTMRKHYDKPTKSYKFKGSIFLTFETKDQAKAFLE 212
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 8/87 (9%)
Query: 1 MEFYLSDSNLRKDRFFSQLL--QESPEIEVSVFLKCNKLARLTHDPDDVVKALRKSK--L 56
+E+Y D+NL +D+F + + E + +SV + +LA L+ D ++V AL KS+ L
Sbjct: 58 VEYYFGDANLNRDKFLREQIGKNEDGWVPLSVLVTFKRLASLSTDLSEIVAALNKSEEGL 117
Query: 57 LEVTEDGTKVKGNIIRHFLVPISMETE 83
+E++ED K ++ RH PI E
Sbjct: 118 VEISED----KLSLRRHPERPIPEHNE 140
>sp|Q9WX39|RBPF_NOSS1 Putative RNA-binding protein RbpF OS=Nostoc sp. (strain PCC 7120 /
UTEX 2576) GN=rbpF PE=3 SV=3
Length = 105
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 197 CTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
+IYV L E + I +VF++YG V V LP + TG+L+GFAFVE + E A+E
Sbjct: 1 MSIYVGNLSYEVTQEDISNVFAEYGSVKRVVLPTDRETGRLRGFAFVEMGSDAEETAAIE 60
Query: 257 LGLNPC 262
GL+
Sbjct: 61 -GLDGA 65
>sp|O17310|SXL_MUSDO Sex-lethal homolog OS=Musca domestica GN=SXL PE=2 SV=1
Length = 324
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 53/102 (51%), Gaps = 6/102 (5%)
Query: 176 TEDGTKVR--RTVVVQDKP---DVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPK 230
T +G VR R V +P + + +YV LP D +E +F KYG + ++ +
Sbjct: 162 TVNGITVRNKRLKVSYARPGGESIKDTNLYVTNLPRTITDDELEKIFGKYGNIVQKNILR 221
Query: 231 FKSTGKLKGFAFVEFSTKEEAAKALELGLNPCPPDYQSSILT 272
K TG+ +G AFV F+ +EEA +A+ LN P+ S LT
Sbjct: 222 DKLTGRPRGVAFVRFNKREEAQEAIS-ALNNVIPEGASQPLT 262
>sp|P87058|LAH1_SCHPO La protein homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=sla1 PE=1 SV=1
Length = 298
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 85/178 (47%), Gaps = 16/178 (8%)
Query: 112 QIMNLMEFYLSDSNLRKDRFFSQLLQES----PEIEVSVFLKCNKLARLTHDPDDVVKAL 167
+++ +EFY SD+NL D+F Q++ P ++ F + + L + +V AL
Sbjct: 66 EVLKQVEFYFSDTNLPHDKFLWTTSQKNDGWVPIQTIANFKRMRRFQPL----EAIVNAL 121
Query: 168 RKS-KLLEVTEDGTKVRRTV--VVQDKPDVDECTIYVEKLPPEAEHDYI--ESVFSK-YG 221
RKS +LLEV E G KVRR + V D V E ++Y + E + I E F + G
Sbjct: 122 RKSPELLEVDEAGEKVRRMIPLVRVDNKSVMERSVYCKGFGDEKDDTQIALEKFFEENAG 181
Query: 222 KVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNPCPPDYQSSILTTTSRLSF 279
++ V + + K KG FVEF + A K LE + P + LT S+ +
Sbjct: 182 PISAVRMRR-DDDKKFKGSVFVEFKEPDVANKFLE-KVKTAPLKWGEDELTIMSKKEY 237
Score = 36.2 bits (82), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 9/75 (12%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQES----PEIEVSVFLKCNKLARLTHDPDDVVKALRKS-K 55
+EFY SD+NL D+F Q++ P ++ F + + L + +V ALRKS +
Sbjct: 71 VEFYFSDTNLPHDKFLWTTSQKNDGWVPIQTIANFKRMRRFQPL----EAIVNALRKSPE 126
Query: 56 LLEVTEDGTKVKGNI 70
LLEV E G KV+ I
Sbjct: 127 LLEVDEAGEKVRRMI 141
>sp|Q6C747|EIF3G_YARLI Eukaryotic translation initiation factor 3 subunit G OS=Yarrowia
lipolytica (strain CLIB 122 / E 150) GN=TIF35 PE=3 SV=1
Length = 294
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 37/64 (57%)
Query: 193 DVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAA 252
D DE T+ V L EA D + +F KYG + V + K + TG+ +GFAFV ++ K A
Sbjct: 210 DDDELTLRVTNLSEEATDDDLRRMFGKYGMINRVYVAKDRDTGRPRGFAFVTYTLKSHAQ 269
Query: 253 KALE 256
ALE
Sbjct: 270 AALE 273
>sp|O97018|SXL_CHRRU Sex-lethal homolog OS=Chrysomya rufifacies GN=SXL PE=2 SV=2
Length = 307
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 56/114 (49%), Gaps = 6/114 (5%)
Query: 159 DPDDVVKALRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFS 218
D + +K+L VT +++ + + + +YV LP D +E +F
Sbjct: 138 DAQNAIKSLNG-----VTVRNKRLKVSYARPGGESIKDTNLYVTNLPRTITDDELEKIFG 192
Query: 219 KYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNPCPPDYQSSILT 272
KYG + ++ + K TGK +G AFV F+ +EEA +A+ LN P+ S LT
Sbjct: 193 KYGNIVQKNILRDKLTGKPRGVAFVRFNKREEAQEAISA-LNNVIPEGASQPLT 245
>sp|Q0U6E7|EIF3G_PHANO Eukaryotic translation initiation factor 3 subunit G
OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 /
FGSC 10173) GN=TIF35 PE=3 SV=2
Length = 281
Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 38/62 (61%)
Query: 195 DECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKA 254
D T+ V + AE + +FS+YG VT V L K + TG+ KGFAFV ++ + +AAKA
Sbjct: 200 DSATLRVTNVSEFAEEQDLRDMFSRYGHVTRVFLAKDRETGRAKGFAFVSYADRTDAAKA 259
Query: 255 LE 256
E
Sbjct: 260 CE 261
>sp|Q19706|EIF3G_CAEEL Eukaryotic translation initiation factor 3 subunit G
OS=Caenorhabditis elegans GN=eif-3.G PE=3 SV=1
Length = 256
Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 39/66 (59%)
Query: 190 DKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKE 249
D+ DE T V LP E D + +F K G+V + + + K TG KGFAFV F +++
Sbjct: 169 DRNRSDENTCRVTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRD 228
Query: 250 EAAKAL 255
+AA+A+
Sbjct: 229 DAARAI 234
>sp|O61374|SXL_CERCA Sex-lethal homolog OS=Ceratitis capitata GN=SXL PE=2 SV=2
Length = 348
Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 6/100 (6%)
Query: 178 DGTKVR--RTVVVQDKP---DVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFK 232
+G VR R V +P + + +YV LP D ++++F KYG + ++ + K
Sbjct: 172 NGITVRNKRLKVSYARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGMIVQKNILRDK 231
Query: 233 STGKLKGFAFVEFSTKEEAAKALELGLNPCPPDYQSSILT 272
TGK +G AFV F+ +EEA +A+ LN P+ S LT
Sbjct: 232 LTGKPRGVAFVRFNKREEAQEAIS-ALNNVIPEGASQPLT 270
>sp|A8WLV5|EIF3G_CAEBR Eukaryotic translation initiation factor 3 subunit G
OS=Caenorhabditis briggsae GN=eif-3.G.1 PE=3 SV=2
Length = 261
Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 37/61 (60%)
Query: 195 DECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKA 254
DE T V LP E D + VF + G+V + + + K TG KGFAFV F ++++AA+A
Sbjct: 179 DENTCRVTNLPQEMNEDELRDVFGRIGRVIRIFIARDKITGLPKGFAFVTFESRDDAARA 238
Query: 255 L 255
+
Sbjct: 239 I 239
>sp|P33399|LHP1_YEAST La protein homolog OS=Saccharomyces cerevisiae (strain ATCC 204508
/ S288c) GN=LHP1 PE=1 SV=2
Length = 275
Score = 52.0 bits (123), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 75/157 (47%), Gaps = 20/157 (12%)
Query: 108 QLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPE-IEVSVFLKCNKLARLTHDP-DDVVK 165
++ + + +EFY S+ N DRF +++ + +S N++ + + P D V++
Sbjct: 28 EVLDRCLKQVEFYFSEFNFPYDRFLRTTAEKNDGWVPISTIATFNRMKK--YRPVDKVIE 85
Query: 166 ALRKSKLLEVTEDGTKVRR------TVVVQDKPDVDECTIYVEKLP---------PEAEH 210
ALR S++LEV+ DG V+R T + + ++ T+ V P PE +
Sbjct: 86 ALRSSEILEVSADGENVKRRVPLDLTAARNARIEQNQRTLAVMNFPHEDVEASQIPELQE 145
Query: 211 DYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFST 247
+ +E+ F K G++ V L + K G VEF T
Sbjct: 146 N-LEAFFKKLGEINQVRLRRDHRNKKFNGTVLVEFKT 181
Score = 37.7 bits (86), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPE-IEVSVFLKCNKLARLTHDP-DDVVKALRKSKLLE 58
+EFY S+ N DRF +++ + +S N++ + + P D V++ALR S++LE
Sbjct: 37 VEFYFSEFNFPYDRFLRTTAEKNDGWVPISTIATFNRMKK--YRPVDKVIEALRSSEILE 94
Query: 59 VTEDGTKVKGNI 70
V+ DG VK +
Sbjct: 95 VSADGENVKRRV 106
>sp|Q3SZM1|MK67I_BOVIN MKI67 FHA domain-interacting nucleolar phosphoprotein OS=Bos taurus
GN=MKI67IP PE=2 SV=1
Length = 296
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 39/78 (50%)
Query: 183 RRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAF 242
RR Q+K IYV LPP I + FS++G VT L + K TG KG+ F
Sbjct: 31 RRATKQQEKQKPTPGVIYVGHLPPTLYETQIRAYFSQFGTVTRFRLSRSKKTGNSKGYGF 90
Query: 243 VEFSTKEEAAKALELGLN 260
VEF +++ A A E N
Sbjct: 91 VEFESEDVAKIAAETMNN 108
>sp|Q60899|ELAV2_MOUSE ELAV-like protein 2 OS=Mus musculus GN=Elavl2 PE=2 SV=1
Length = 360
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 169 KSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSL 228
KS+ +T DG + + P C I+V L P+A+ + +F +G VT V +
Sbjct: 250 KSRFSPMTIDGMTSLAGINIPGHPGTGWC-IFVYNLAPDADESILWQMFGPFGAVTNVKV 308
Query: 229 PKFKSTGKLKGFAFVEFSTKEEAAKAL 255
+ +T K KGF FV + +EAA A+
Sbjct: 309 IRDFNTNKCKGFGFVTMTNYDEAAMAI 335
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 48/106 (45%), Gaps = 3/106 (2%)
Query: 159 DPDDVVKALRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFS 218
DP D KA+ L + KV + + + +YV LP +E +FS
Sbjct: 89 DPKDAEKAINTLNGLRLQTKTIKV--SYARPSSASIRDANLYVSGLPKTMTQKELEQLFS 146
Query: 219 KYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNPCPP 264
+YG++ + + TG +G F+ F + EA +A++ GLN P
Sbjct: 147 QYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIK-GLNGQKP 191
Score = 32.0 bits (71), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 30/58 (51%)
Query: 199 IYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
+ V LP + ++S+F G++ L + K TG+ G+ FV + ++A KA+
Sbjct: 41 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAIN 98
>sp|Q54PB2|MRD1_DICDI Multiple RNA-binding domain-containing protein 1 OS=Dictyostelium
discoideum GN=mrd1 PE=3 SV=1
Length = 895
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 191 KPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEE 250
+P+ I ++ LP E+ I +F+ YG++ V +PK K G +GF FVEF T+EE
Sbjct: 789 QPNKPSSKIIIKNLPFESTIKEIRKLFTAYGEIQSVRIPK-KPNGGHRGFGFVEFLTEEE 847
Query: 251 AAKALE 256
A A+E
Sbjct: 848 AKNAME 853
Score = 39.7 bits (91), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 193 DVDECT-IYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEA 251
DV E I+V L + + +E VFSK+GK++ + +P + K KG AF+ + E A
Sbjct: 356 DVGESGRIFVRNLSYSTKEEDLEKVFSKFGKISEIHIPIDYDSKKSKGIAFILYLIPENA 415
Query: 252 AKAL 255
+AL
Sbjct: 416 VQAL 419
Score = 33.9 bits (76), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 199 IYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELG 258
I V++LP + F K+G VT + K GK + F F+ FST++ A AL L
Sbjct: 6 ICVKQLPKHLTDKRFKEHFEKFGTVTDAKI--IKKDGKSRLFGFIGFSTEQSAKNALSLN 63
>sp|Q9WX37|RBPE_NOSS1 Putative RNA-binding protein RbpE OS=Nostoc sp. (strain PCC 7120 /
UTEX 2576) GN=rbpE PE=3 SV=3
Length = 99
Score = 49.7 bits (117), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/57 (45%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEF--STKEEAA 252
+IYV L D + VFS+YG VT V LP + TG+++GF FVE S E+AA
Sbjct: 2 SIYVGNLSYSVTQDDLTKVFSEYGSVTRVQLPTDRETGRVRGFGFVEMESSAAEDAA 58
>sp|Q3ZC12|EIF3G_BOVIN Eukaryotic translation initiation factor 3 subunit G OS=Bos taurus
GN=EIF3G PE=2 SV=1
Length = 320
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%)
Query: 178 DGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKL 237
DG R + ++ D TI V L + ++ +F +G ++ + L K K+TG+
Sbjct: 220 DGASRRGESMQPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQS 279
Query: 238 KGFAFVEFSTKEEAAKAL 255
KGFAF+ F +E+AA+A+
Sbjct: 280 KGFAFISFHRREDAARAI 297
>sp|O75821|EIF3G_HUMAN Eukaryotic translation initiation factor 3 subunit G OS=Homo
sapiens GN=EIF3G PE=1 SV=2
Length = 320
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%)
Query: 178 DGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKL 237
DG R + ++ D TI V L + ++ +F +G ++ + L K K+TG+
Sbjct: 220 DGASRRGESMQPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQS 279
Query: 238 KGFAFVEFSTKEEAAKAL 255
KGFAF+ F +E+AA+A+
Sbjct: 280 KGFAFISFHRREDAARAI 297
>sp|Q9Z1D1|EIF3G_MOUSE Eukaryotic translation initiation factor 3 subunit G OS=Mus
musculus GN=Eif3g PE=1 SV=2
Length = 320
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%)
Query: 178 DGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKL 237
DG R + ++ D TI V L + ++ +F +G ++ + L K K+TG+
Sbjct: 220 DGASRRGESMQPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQS 279
Query: 238 KGFAFVEFSTKEEAAKAL 255
KGFAF+ F +E+AA+A+
Sbjct: 280 KGFAFISFHRREDAARAI 297
>sp|Q5RK09|EIF3G_RAT Eukaryotic translation initiation factor 3 subunit G OS=Rattus
norvegicus GN=Eif3g PE=2 SV=1
Length = 320
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%)
Query: 178 DGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKL 237
DG R + ++ D TI V L + ++ +F +G ++ + L K K+TG+
Sbjct: 220 DGASRRGESMQPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQS 279
Query: 238 KGFAFVEFSTKEEAAKAL 255
KGFAF+ F +E+AA+A+
Sbjct: 280 KGFAFISFHRREDAARAI 297
>sp|Q2GSX8|PABP_CHAGB Polyadenylate-binding protein, cytoplasmic and nuclear
OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 /
DSM 1962 / NBRC 6347 / NRRL 1970) GN=PAB1 PE=3 SV=1
Length = 783
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 197 CTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
IYV+ + EA + +F+KYG VT SL + S GK +GF FV F+T E AAKA+E
Sbjct: 246 TNIYVKNISLEATDEEFRDLFAKYGDVTSSSLAR-DSEGKSRGFGFVNFTTHECAAKAVE 304
Score = 31.2 bits (69), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 32/60 (53%)
Query: 197 CTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
++YV +L P + +FS+ G V + + + T + G+A+V +++ + KALE
Sbjct: 65 ASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDTITRRSLGYAYVNYNSTSDGEKALE 124
>sp|Q24668|SXL_DROSU Protein sex-lethal OS=Drosophila subobscura GN=Sxl PE=2 SV=2
Length = 354
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 6/100 (6%)
Query: 178 DGTKVR--RTVVVQDKP---DVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFK 232
+G VR R V +P + + +YV LP D ++++F KYG + ++ + K
Sbjct: 189 NGITVRNKRLKVSYARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDK 248
Query: 233 STGKLKGFAFVEFSTKEEAAKALELGLNPCPPDYQSSILT 272
TG+ +G AFV ++ +EEA +A+ LN P+ S L+
Sbjct: 249 LTGRPRGVAFVRYNKREEAQEAIS-ALNNVIPEGGSQPLS 287
>sp|A6SGN8|EIF3G_BOTFB Eukaryotic translation initiation factor 3 subunit G OS=Botryotinia
fuckeliana (strain B05.10) GN=tif35 PE=3 SV=1
Length = 288
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 36/62 (58%)
Query: 195 DECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKA 254
D T+ V + AE + +F ++G+VT V L K + TG KGFAF+ F + +AAKA
Sbjct: 206 DLATLRVTNVSEMAEEQELRDMFERFGRVTRVFLAKDRETGLAKGFAFISFQERSDAAKA 265
Query: 255 LE 256
E
Sbjct: 266 CE 267
>sp|A7EWN6|EIF3G_SCLS1 Eukaryotic translation initiation factor 3 subunit G OS=Sclerotinia
sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=tif35
PE=3 SV=1
Length = 288
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 36/62 (58%)
Query: 195 DECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKA 254
D T+ V + AE + +F ++G+VT V L K + TG KGFAF+ F + +AAKA
Sbjct: 206 DLATLRVTNVSEMAEEQELRDMFERFGRVTRVFLAKDRETGLAKGFAFISFQERSDAAKA 265
Query: 255 LE 256
E
Sbjct: 266 CE 267
>sp|Q6DRC4|EIF3G_DANRE Eukaryotic translation initiation factor 3 subunit G OS=Danio rerio
GN=eif3g PE=1 SV=1
Length = 293
Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%)
Query: 178 DGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKL 237
DG R + ++ D TI V L + ++ +F +G ++ + L K K+TG+
Sbjct: 193 DGGTRRGESMQPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKNTGQS 252
Query: 238 KGFAFVEFSTKEEAAKAL 255
KGFAF+ F +E+AA+A+
Sbjct: 253 KGFAFISFHRREDAARAI 270
>sp|Q5B630|PABP_EMENI Polyadenylate-binding protein, cytoplasmic and nuclear
OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 /
CBS 112.46 / NRRL 194 / M139) GN=pab1 PE=2 SV=2
Length = 732
Score = 48.5 bits (114), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 197 CTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
IY++ + PE E + +F K+G++T +L + S GK +GF FV FST E A A+E
Sbjct: 223 TNIYIKNIDPEVEDEEFRKLFEKFGEITSATLSR-DSEGKSRGFGFVNFSTHESAQAAVE 281
>sp|A4RHN3|EIF3G_MAGO7 Eukaryotic translation initiation factor 3 subunit G OS=Magnaporthe
oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958)
GN=TIF35 PE=3 SV=1
Length = 303
Score = 48.5 bits (114), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 36/60 (60%)
Query: 195 DECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKA 254
D T+ V + AE + +F ++G+VT V L K + TG KGFAF+ F+ +E+A KA
Sbjct: 221 DLATLRVTNVSEMAEEQELRDMFERFGRVTRVFLAKDRDTGLAKGFAFISFADREDAVKA 280
>sp|Q641B2|EI3GB_XENLA Eukaryotic translation initiation factor 3 subunit G-B OS=Xenopus
laevis GN=eif3g-b PE=2 SV=1
Length = 308
Score = 48.5 bits (114), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%)
Query: 178 DGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKL 237
DG R + ++ D TI V L + ++ +F +G ++ + L K K+TG+
Sbjct: 208 DGGSRRGESMQPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQS 267
Query: 238 KGFAFVEFSTKEEAAKAL 255
KGFAF+ F +E+AA+A+
Sbjct: 268 KGFAFISFHRREDAARAI 285
>sp|Q44554|RBPB_NOSS1 Putative RNA-binding protein RbpB OS=Nostoc sp. (strain PCC 7120 /
UTEX 2576) GN=rbpB PE=3 SV=3
Length = 103
Score = 48.5 bits (114), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 35/59 (59%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
+IYV L + + + +VF++YG V V LP + TG+++GF FVE + E A+E
Sbjct: 2 SIYVGNLSYDVTEESLNAVFAEYGSVKRVQLPVDRETGRVRGFGFVEMGSDAEETAAIE 60
>sp|P19339|SXL_DROME Protein sex-lethal OS=Drosophila melanogaster GN=Sxl PE=1 SV=1
Length = 354
Score = 48.5 bits (114), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 6/100 (6%)
Query: 178 DGTKVR--RTVVVQDKP---DVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFK 232
+G VR R V +P + + +YV LP D ++++F KYG + ++ + K
Sbjct: 187 NGITVRNKRLKVSYARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDK 246
Query: 233 STGKLKGFAFVEFSTKEEAAKALELGLNPCPPDYQSSILT 272
TG+ +G AFV ++ +EEA +A+ LN P+ S L+
Sbjct: 247 LTGRPRGVAFVRYNKREEAQEAIS-ALNNVIPEGGSQPLS 285
>sp|Q9BRS8|LARP6_HUMAN La-related protein 6 OS=Homo sapiens GN=LARP6 PE=1 SV=1
Length = 491
Score = 48.5 bits (114), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 107 KQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN--KLARLTHDPDDVV 164
++L +++++ +EFY SD NL KD F + ++ + VSV L + K+ LT D
Sbjct: 90 EELIKKLVDQIEFYFSDENLEKDAFLLKHVRRNKLGYVSVKLLTSFKKVKHLTRDWRTTA 149
Query: 165 KALRKSKLLEVTEDGTKVRRTVVV 188
AL+ S +LE+ ED KVRRT V
Sbjct: 150 HALKYSVVLELNEDHRKVRRTTPV 173
Score = 38.9 bits (89), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN--KLARLTHDPDDVVKALRKSKLLE 58
+EFY SD NL KD F + ++ + VSV L + K+ LT D AL+ S +LE
Sbjct: 100 IEFYFSDENLEKDAFLLKHVRRNKLGYVSVKLLTSFKKVKHLTRDWRTTAHALKYSVVLE 159
Query: 59 VTEDGTKVK 67
+ ED KV+
Sbjct: 160 LNEDHRKVR 168
>sp|Q6DJI8|EI3GA_XENLA Eukaryotic translation initiation factor 3 subunit G-A OS=Xenopus
laevis GN=eif3g-a PE=2 SV=1
Length = 308
Score = 48.5 bits (114), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%)
Query: 178 DGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKL 237
DG R + ++ D TI V L + ++ +F +G ++ + L K K+TG+
Sbjct: 208 DGGSRRGESMQPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQS 267
Query: 238 KGFAFVEFSTKEEAAKAL 255
KGFAF+ F +E+AA+A+
Sbjct: 268 KGFAFISFHRREDAARAI 285
>sp|Q9SAB3|RB45B_ARATH Polyadenylate-binding protein RBP45B OS=Arabidopsis thaliana
GN=RBP45B PE=1 SV=1
Length = 405
Score = 48.1 bits (113), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 52/97 (53%), Gaps = 13/97 (13%)
Query: 193 DVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAA 252
D + T++V L D++++VFS+YG++ +V +P K G FV+FS K A
Sbjct: 257 DPNNTTVFVGGLDASVTDDHLKNVFSQYGEIVHVKIPAGKRCG------FVQFSEKSCAE 310
Query: 253 KALELGLNPCPPDYQSSILTTTSRLSFGITPLGFESG 289
+AL + LN + TT RLS+G +P +SG
Sbjct: 311 EALRM-LNGV------QLGGTTVRLSWGRSPSNKQSG 340
Score = 33.9 bits (76), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 13/59 (22%), Positives = 34/59 (57%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
T+++ L + +++ F+ G++ + + K TG+++G+ F+EF++ A + L+
Sbjct: 63 TLWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQTGQVEGYGFIEFASHAAAERVLQ 121
Score = 32.3 bits (72), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 7/76 (9%)
Query: 190 DKPDVDECTIYVEKLPPEAEHDYI--ESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFST 247
D PD TI+V L + DYI E+ + Y V + + TG+ KG+ FV FS
Sbjct: 151 DSPDY---TIFVGDLAADVT-DYILLETFRASYPSVKGAKVVIDRVTGRTKGYGFVRFSD 206
Query: 248 KEEAAKAL-ELGLNPC 262
+ E +A+ E+ PC
Sbjct: 207 ESEQIRAMTEMNGVPC 222
>sp|Q28CY2|EIF3G_XENTR Eukaryotic translation initiation factor 3 subunit G OS=Xenopus
tropicalis GN=eif3g PE=2 SV=1
Length = 310
Score = 48.1 bits (113), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%)
Query: 178 DGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKL 237
DG R + ++ D TI V L + ++ +F +G ++ + L K K+TG+
Sbjct: 210 DGGSRRGESMQPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQS 269
Query: 238 KGFAFVEFSTKEEAAKAL 255
KGFAF+ F +E+AA+A+
Sbjct: 270 KGFAFISFHRREDAARAI 287
>sp|O01671|SXL_MEGSC Sex-lethal homolog OS=Megaselia scalaris GN=SXL PE=2 SV=3
Length = 321
Score = 47.8 bits (112), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 57/111 (51%), Gaps = 3/111 (2%)
Query: 162 DVVKALRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKYG 221
D ++A+ + L +T +++ + + + +YV L + +E++F KYG
Sbjct: 131 DALRAI--NNLNGITVRNKRIKVSFARPGGEQLRDTNLYVTNLSRSITDEQLETIFGKYG 188
Query: 222 KVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALELGLNPCPPDYQSSILT 272
++ ++ + K TG +G AF+ F+ +EEA +A+ LN P+ + LT
Sbjct: 189 QIVQKNILRDKHTGTPRGVAFIRFNKREEAQEAISA-LNNVIPEGGTQPLT 238
>sp|Q74ZS6|PABP_ASHGO Polyadenylate-binding protein, cytoplasmic and nuclear OS=Ashbya
gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 /
NRRL Y-1056) GN=PAB1 PE=3 SV=1
Length = 585
Score = 47.8 bits (112), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 197 CTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
+YV+ + E + E +F KYGK+T L K S GKL+GF FV F AAKA++
Sbjct: 219 TNVYVKNIDQETSQEEFEELFGKYGKITSAVLEK-DSEGKLRGFGFVNFEDHAAAAKAVD 277
Score = 35.0 bits (79), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 197 CTIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKAL 255
++V+ L + + ++ F+ +G +T + + TG +GF FV FST EEA KA+
Sbjct: 322 VNLFVKNLDDSIDDEKLKEEFAPFGTITSAKVMR-DETGNSRGFGFVCFSTPEEATKAI 379
Score = 33.1 bits (74), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 41/96 (42%), Gaps = 4/96 (4%)
Query: 161 DDVVKALRKSKLLEVTEDGTKVRRTVVVQDKPDVDECTIYVEKLPPEAEHDYIESVFSKY 220
D + L + K+ E T T T V + ++YV +L P + +FS
Sbjct: 6 DKTAEQLEQLKIEEQTAPTTTESETPKV----ETSGASLYVGELEPTVSEALLYDIFSPI 61
Query: 221 GKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
G V+ + + + T G+A+V F E KA+E
Sbjct: 62 GSVSSIRVCRDAITNTSLGYAYVNFHDHEAGPKAIE 97
Score = 31.6 bits (70), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Query: 198 TIYVEKLPPEAEHDYIESVFSKYGKVTYVSLPKFKSTGKLKGFAFVEFSTKEEAAKALE 256
IY++ L P ++ + FS +G + + G +GF FV F + +A A+E
Sbjct: 127 NIYIKNLHPAIDNKSLHETFSTFGNILSCKVAT-DENGVSRGFGFVHFENESDARDAIE 184
>sp|Q8BN59|LARP6_MOUSE La-related protein 6 OS=Mus musculus GN=Larp6 PE=1 SV=1
Length = 492
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 107 KQLYQQIMNLMEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN--KLARLTHDPDDVV 164
++L +++++ +EFY SD NL KD F + ++ + VSV L + K+ LT D
Sbjct: 90 EELIRKLVDQIEFYFSDENLEKDAFLLKHVRRNKLGYVSVKLLTSFKKVKHLTRDWRTTA 149
Query: 165 KALRKSKLLEVTEDGTKVRRTVVV 188
AL+ S LE+ ED KVRRT V
Sbjct: 150 HALKYSVTLELNEDHRKVRRTTPV 173
Score = 38.1 bits (87), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 1 MEFYLSDSNLRKDRFFSQLLQESPEIEVSVFLKCN--KLARLTHDPDDVVKALRKSKLLE 58
+EFY SD NL KD F + ++ + VSV L + K+ LT D AL+ S LE
Sbjct: 100 IEFYFSDENLEKDAFLLKHVRRNKLGYVSVKLLTSFKKVKHLTRDWRTTAHALKYSVTLE 159
Query: 59 VTEDGTKVK 67
+ ED KV+
Sbjct: 160 LNEDHRKVR 168
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.135 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 110,381,119
Number of Sequences: 539616
Number of extensions: 4599021
Number of successful extensions: 15899
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 539
Number of HSP's successfully gapped in prelim test: 268
Number of HSP's that attempted gapping in prelim test: 14613
Number of HSP's gapped (non-prelim): 1369
length of query: 299
length of database: 191,569,459
effective HSP length: 117
effective length of query: 182
effective length of database: 128,434,387
effective search space: 23375058434
effective search space used: 23375058434
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)