Your job contains 1 sequence.
>psy3939
MVTYLPSVKTPGGRLVYHYLKKAGKVPRCGHCKIKLPGIEKARSIERSRMSRRRKMVKRS
YGGVLCHKCVKEKFIYCFFYSHCKIKLPGIEKARSIERSRMSRRRKMVKRSYGGVLCHKC
VKE
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy3939
(123 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0037686 - symbol:RpL34b "Ribosomal protein L34b" s... 182 3.8e-14 1
FB|FBgn0039406 - symbol:RpL34a "Ribosomal protein L34a" s... 181 4.9e-14 1
DICTYBASE|DDB_G0286389 - symbol:rpl34 "S60 ribosomal prot... 163 3.9e-12 1
ASPGD|ASPL0000072709 - symbol:AN4522 species:162425 "Emer... 156 2.2e-11 1
UNIPROTKB|G4N5R0 - symbol:MGG_05296 "60S ribosomal protei... 137 2.2e-09 1
UNIPROTKB|E2R118 - symbol:RPL34 "Uncharacterized protein"... 135 3.6e-09 1
WB|WBGene00004448 - symbol:rpl-34 species:6239 "Caenorhab... 135 3.6e-09 1
UNIPROTKB|F1ML72 - symbol:RPL34 "Uncharacterized protein"... 129 1.6e-08 1
UNIPROTKB|P49207 - symbol:RPL34 "60S ribosomal protein L3... 129 1.6e-08 1
UNIPROTKB|F2Z5B9 - symbol:RPL34 "60S ribosomal protein L3... 129 1.6e-08 1
ZFIN|ZDB-GENE-040426-1033 - symbol:rpl34 "ribosomal prote... 128 2.0e-08 1
SGD|S000002135 - symbol:RPL34A "Ribosomal 60S subunit pro... 123 6.8e-08 1
SGD|S000001314 - symbol:RPL34B "Ribosomal 60S subunit pro... 122 8.7e-08 1
RGD|1561086 - symbol:Rpl34l1 "ribosomal protein L34-like1... 119 1.8e-07 1
RGD|1595454 - symbol:Rpl34-ps1 "ribosomal protein L34, ps... 117 2.9e-07 1
POMBASE|SPAC23A1.08c - symbol:rpl3401 "60S ribosomal prot... 114 6.1e-07 1
POMBASE|SPCC1322.15 - symbol:rpl3402 "60S ribosomal prote... 113 7.8e-07 1
TAIR|locus:2202770 - symbol:AT1G26880 species:3702 "Arabi... 102 1.1e-05 1
TAIR|locus:2026724 - symbol:RPL34 "ribosomal protein L34"... 98 3.0e-05 1
TAIR|locus:2090759 - symbol:AT3G28900 species:3702 "Arabi... 90 0.00021 1
UNIPROTKB|Q29223 - symbol:RPL34 "60S ribosomal protein L3... 89 0.00027 1
>FB|FBgn0037686 [details] [associations]
symbol:RpL34b "Ribosomal protein L34b" species:7227
"Drosophila melanogaster" [GO:0022625 "cytosolic large ribosomal
subunit" evidence=ISS] [GO:0003735 "structural constituent of
ribosome" evidence=ISS;IDA] [GO:0006412 "translation" evidence=ISS]
[GO:0005840 "ribosome" evidence=IDA] HAMAP:MF_00349
InterPro:IPR008195 Pfam:PF01199 PRINTS:PR01250 EMBL:AE014297
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 KO:K02915
InterPro:IPR018065 PANTHER:PTHR10759 PROSITE:PS01145
GeneTree:ENSGT00390000008294 OrthoDB:EOG49ZW5T EMBL:AY089676
RefSeq:NP_649887.1 RefSeq:NP_731345.1 UniGene:Dm.4884 SMR:Q9VHE5
IntAct:Q9VHE5 MINT:MINT-885983 STRING:Q9VHE5
EnsemblMetazoa:FBtr0082049 EnsemblMetazoa:FBtr0082050 GeneID:41120
KEGG:dme:Dmel_CG9354 UCSC:CG9354-RA CTD:41120 FlyBase:FBgn0037686
InParanoid:Q9VHE5 OMA:CDRDRIK GenomeRNAi:41120 NextBio:822286
Uniprot:Q9VHE5
Length = 168
Score = 182 (69.1 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 35/78 (44%), Positives = 42/78 (53%)
Query: 8 VKTPGGRLVYHYLKKAGKVPRCGHCKIKLPGIEKAXXXXXXXXXXXXXXXXXXYGGVLCH 67
V+TPGGRLVY Y+KK VPRCG CK KL GI + YGGVLCH
Sbjct: 23 VRTPGGRLVYQYVKKNPTVPRCGQCKEKLKGITPSRPSERPRMSKRLKTVSRTYGGVLCH 82
Query: 68 KCVKEKFIYCFFYSHCKI 85
C++E+ + F KI
Sbjct: 83 SCLRERIVRAFLIEEQKI 100
>FB|FBgn0039406 [details] [associations]
symbol:RpL34a "Ribosomal protein L34a" species:7227
"Drosophila melanogaster" [GO:0022625 "cytosolic large ribosomal
subunit" evidence=ISS] [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] HAMAP:MF_00349
InterPro:IPR008195 Pfam:PF01199 PRINTS:PR01250 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 eggNOG:COG2174 InterPro:IPR018065
PANTHER:PTHR10759 PROSITE:PS01145 EMBL:AY071577
ProteinModelPortal:Q8SYG0 SMR:Q8SYG0 STRING:Q8SYG0 PaxDb:Q8SYG0
PRIDE:Q8SYG0 FlyBase:FBgn0039406 InParanoid:Q8SYG0
OrthoDB:EOG49ZW5T ArrayExpress:Q8SYG0 Bgee:Q8SYG0 Uniprot:Q8SYG0
Length = 162
Score = 181 (68.8 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 35/78 (44%), Positives = 42/78 (53%)
Query: 8 VKTPGGRLVYHYLKKAGKVPRCGHCKIKLPGIEKAXXXXXXXXXXXXXXXXXXYGGVLCH 67
V+TPGGRLVY Y+KK VPRCG CK KL GI + YGGVLCH
Sbjct: 23 VRTPGGRLVYQYVKKNPTVPRCGQCKEKLHGITASRPSERPRMSKRLKTVSRTYGGVLCH 82
Query: 68 KCVKEKFIYCFFYSHCKI 85
C++E+ + F KI
Sbjct: 83 SCLRERIVRAFLIEEQKI 100
>DICTYBASE|DDB_G0286389 [details] [associations]
symbol:rpl34 "S60 ribosomal protein L34"
species:44689 "Dictyostelium discoideum" [GO:0006412 "translation"
evidence=IEA;ISS] [GO:0005840 "ribosome" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003735 "structural constituent
of ribosome" evidence=IEA;ISS] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR008195 Pfam:PF01199 PRINTS:PR01250
dictyBase:DDB_G0286389 GenomeReviews:CM000153_GR GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 EMBL:AAFI02000085 eggNOG:COG2174
KO:K02915 OMA:KKTVQRA PANTHER:PTHR10759 PROSITE:PS01145
RefSeq:XP_637722.1 STRING:Q54LV8 PRIDE:Q54LV8
EnsemblProtists:DDB0231151 GeneID:8625587 KEGG:ddi:DDB_G0286389
ProtClustDB:PTZ00074 Uniprot:Q54LV8
Length = 122
Score = 163 (62.4 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 32/77 (41%), Positives = 37/77 (48%)
Query: 8 VKTPGGRLVYHYLKKAGKVPRCGHCKIKLPGIEKAXXXXXXXXXXXXXXXXXXYGGVLCH 67
VKTPGGRLVY Y+ K GKVPRCG C + L GI YGG C
Sbjct: 23 VKTPGGRLVYQYIGKTGKVPRCGECGVNLAGIPALRPYQYKNLPKSRRTVSRAYGGSKCA 82
Query: 68 KCVKEKFIYCFFYSHCK 84
KCV+ + + F K
Sbjct: 83 KCVRNRIVRAFLIEEQK 99
>ASPGD|ASPL0000072709 [details] [associations]
symbol:AN4522 species:162425 "Emericella nidulans"
[GO:0005829 "cytosol" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR008195 Pfam:PF01199 PRINTS:PR01250 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 EMBL:BN001303 EMBL:AACD01000078
eggNOG:COG2174 HOGENOM:HOG000216922 KO:K02915 OMA:KKTVQRA
InterPro:IPR018065 PANTHER:PTHR10759 PROSITE:PS01145
OrthoDB:EOG4QG0PT RefSeq:XP_662126.1 STRING:Q5B4K8
EnsemblFungi:CADANIAT00005918 GeneID:2872322 KEGG:ani:AN4522.2
Uniprot:Q5B4K8
Length = 116
Score = 156 (60.0 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 32/78 (41%), Positives = 37/78 (47%)
Query: 8 VKTPGGRLVYHYLKKAGKVPRCGHCKIKLPGIEKAXXXXXXXXXXXXXXXXXXYGGVLCH 67
VKTPGG L Y +LKK G P+CG C IKLPGI YGG C
Sbjct: 24 VKTPGGELRYQHLKKQGTAPKCGDCGIKLPGIPALRPREYAQISRPKKNVSRAYGGSRCA 83
Query: 68 KCVKEKFIYCFFYSHCKI 85
CVK++ + F KI
Sbjct: 84 GCVKDRIVRAFLIEEQKI 101
>UNIPROTKB|G4N5R0 [details] [associations]
symbol:MGG_05296 "60S ribosomal protein L34-B"
species:242507 "Magnaporthe oryzae 70-15" [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR008195 Pfam:PF01199
PRINTS:PR01250 EMBL:CM001233 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 GO:GO:0043581 KO:K02915 InterPro:IPR018065
PANTHER:PTHR10759 PROSITE:PS01145 RefSeq:XP_003712857.1
EnsemblFungi:MGG_05296T0 GeneID:2675763 KEGG:mgr:MGG_05296
Uniprot:G4N5R0
Length = 116
Score = 137 (53.3 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 27/78 (34%), Positives = 36/78 (46%)
Query: 8 VKTPGGRLVYHYLKKAGKVPRCGHCKIKLPGIEKAXXXXXXXXXXXXXXXXXXYGGVLCH 67
+KTPGG L ++KK G P+CG C IKLPG+ YGG C
Sbjct: 24 IKTPGGDLRILHIKKRGTAPKCGDCGIKLPGVPALRPREYAQISKPKKTVQRAYGGSRCG 83
Query: 68 KCVKEKFIYCFFYSHCKI 85
CV+++ + F KI
Sbjct: 84 NCVRDRVVRAFLIEEQKI 101
>UNIPROTKB|E2R118 [details] [associations]
symbol:RPL34 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR008195
Pfam:PF01199 PRINTS:PR01250 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 OMA:KKTVQRA InterPro:IPR018065 PANTHER:PTHR10759
PROSITE:PS01145 GeneTree:ENSGT00390000008294 EMBL:AAEX03000054
UniGene:Cfa.40242 ProteinModelPortal:E2R118 PRIDE:E2R118
Ensembl:ENSCAFT00000000045 NextBio:20853841 Uniprot:E2R118
Length = 137
Score = 135 (52.6 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 29/79 (36%), Positives = 39/79 (49%)
Query: 9 KTPGGRLVYHYLKKAGKVPR--CGHCKIKLPGIEKAXXXXXXXXXXXXXXXXXXYGGVLC 66
+TPG R+VY Y KK GK P+ CG C +L G+ YGG +C
Sbjct: 45 RTPGNRIVYLYTKKVGKAPKSACGVCPGRLRGVRAVRPKVLMRLSKMKKHVSRAYGGSMC 104
Query: 67 HKCVKEKFIYCFFYSHCKI 85
KCV+++ I C F+ KI
Sbjct: 105 AKCVRDR-IKCAFFIEQKI 122
>WB|WBGene00004448 [details] [associations]
symbol:rpl-34 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] InterPro:IPR008195 Pfam:PF01199
PRINTS:PR01250 GO:GO:0008340 GO:GO:0009792 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 EMBL:CU457741 eggNOG:COG2174 HOGENOM:HOG000216922
KO:K02915 OMA:KKTVQRA InterPro:IPR018065 PANTHER:PTHR10759
PROSITE:PS01145 GeneTree:ENSGT00390000008294 RefSeq:NP_502330.1
ProteinModelPortal:A3QMC5 SMR:A3QMC5 STRING:A3QMC5 PaxDb:A3QMC5
EnsemblMetazoa:C42C1.14.1 EnsemblMetazoa:C42C1.14.2 GeneID:178173
KEGG:cel:CELE_C42C1.14 UCSC:C42C1.14.1 CTD:178173 WormBase:C42C1.14
InParanoid:A3QMC5 NextBio:900018 Uniprot:A3QMC5
Length = 110
Score = 135 (52.6 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 30/78 (38%), Positives = 36/78 (46%)
Query: 8 VKTPGGRLVYHYLKKAGKVPRCGHCKIKLPGIEKAXXXXXXXXXXXXXXXXXXYGGVLCH 67
VKTPGGRLV Y+KK G++P+C +KL GI A YGG L
Sbjct: 23 VKTPGGRLVVQYIKKRGQIPKCRDTGVKLHGITPARPIALRLLKRNERTVTRAYGGCLSP 82
Query: 68 KCVKEKFIYCFFYSHCKI 85
VKE+ F KI
Sbjct: 83 NAVKERITRAFLVEEQKI 100
>UNIPROTKB|F1ML72 [details] [associations]
symbol:RPL34 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR008195 Pfam:PF01199 PRINTS:PR01250 GO:GO:0006412
GO:GO:0003735 GO:GO:0022625 OMA:KKTVQRA InterPro:IPR018065
PANTHER:PTHR10759 PROSITE:PS01145 GeneTree:ENSGT00390000008294
EMBL:DAAA02016562 IPI:IPI00685264 Ensembl:ENSBTAT00000018910
ArrayExpress:F1ML72 Uniprot:F1ML72
Length = 128
Score = 129 (50.5 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 27/79 (34%), Positives = 36/79 (45%)
Query: 9 KTPGGRLVYHYLKKAGKVPR--CGHCKIKLPGIEKAXXXXXXXXXXXXXXXXXXYGGVLC 66
+TPG R+VY Y KK GK P+ CG C +L G+ YGG +C
Sbjct: 35 RTPGNRIVYLYTKKVGKAPKSACGVCPGRLRGVRAVRPKVLMRLSKTKKHVSRAYGGSMC 94
Query: 67 HKCVKEKFIYCFFYSHCKI 85
KCV+++ F KI
Sbjct: 95 AKCVRDRIKRAFLIEEQKI 113
>UNIPROTKB|P49207 [details] [associations]
symbol:RPL34 "60S ribosomal protein L34" species:9606 "Homo
sapiens" [GO:0006412 "translation" evidence=NAS;TAS] [GO:0003735
"structural constituent of ribosome" evidence=NAS] [GO:0022625
"cytosolic large ribosomal subunit" evidence=IDA] [GO:0003723 "RNA
binding" evidence=TAS] [GO:0000184 "nuclear-transcribed mRNA
catabolic process, nonsense-mediated decay" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0006413 "translational
initiation" evidence=TAS] [GO:0006414 "translational elongation"
evidence=TAS] [GO:0006415 "translational termination" evidence=TAS]
[GO:0006614 "SRP-dependent cotranslational protein targeting to
membrane" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0016070 "RNA
metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
process" evidence=TAS] [GO:0019058 "viral infectious cycle"
evidence=TAS] [GO:0019083 "viral transcription" evidence=TAS]
[GO:0044267 "cellular protein metabolic process" evidence=TAS]
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_17015
InterPro:IPR008195 Pfam:PF01199 PRINTS:PR01250
Reactome:REACT_116125 GO:GO:0000184 GO:GO:0006413 GO:GO:0003723
GO:GO:0003735 GO:GO:0006415 GO:GO:0006414 Reactome:REACT_1762
GO:GO:0006614 GO:GO:0022625 GO:GO:0019083 eggNOG:COG2174
HOGENOM:HOG000216922 KO:K02915 OMA:KKTVQRA InterPro:IPR018065
PANTHER:PTHR10759 PROSITE:PS01145 CTD:6164 HOVERGEN:HBG024280
OrthoDB:EOG4RNB9V EMBL:L38941 EMBL:AB061832 EMBL:CR542232
EMBL:CR542242 EMBL:BC001773 EMBL:BC070208 EMBL:BC106009
EMBL:AB007181 IPI:IPI00219160 PIR:I68524 RefSeq:NP_000986.2
RefSeq:NP_296374.1 UniGene:Hs.438227 ProteinModelPortal:P49207
SMR:P49207 IntAct:P49207 STRING:P49207 PhosphoSite:P49207
DMDM:22002070 PaxDb:P49207 PeptideAtlas:P49207 PRIDE:P49207
DNASU:6164 Ensembl:ENST00000394665 Ensembl:ENST00000394667
Ensembl:ENST00000394668 Ensembl:ENST00000502534
Ensembl:ENST00000506397 GeneID:6164 KEGG:hsa:6164 UCSC:uc003hyz.3
GeneCards:GC04P109541 H-InvDB:HIX0004432 HGNC:HGNC:10340
HPA:HPA035139 neXtProt:NX_P49207 PharmGKB:PA34723 InParanoid:P49207
PhylomeDB:P49207 ChiTaRS:RPL34 GenomeRNAi:6164 NextBio:23943
Bgee:P49207 CleanEx:HS_RPL34 Genevestigator:P49207 Uniprot:P49207
Length = 117
Score = 129 (50.5 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 27/79 (34%), Positives = 36/79 (45%)
Query: 9 KTPGGRLVYHYLKKAGKVPR--CGHCKIKLPGIEKAXXXXXXXXXXXXXXXXXXYGGVLC 66
+TPG R+VY Y KK GK P+ CG C +L G+ YGG +C
Sbjct: 24 RTPGNRIVYLYTKKVGKAPKSACGVCPGRLRGVRAVRPKVLMRLSKTKKHVSRAYGGSMC 83
Query: 67 HKCVKEKFIYCFFYSHCKI 85
KCV+++ F KI
Sbjct: 84 AKCVRDRIKRAFLIEEQKI 102
>UNIPROTKB|F2Z5B9 [details] [associations]
symbol:RPL34 "60S ribosomal protein L34" species:9823 "Sus
scrofa" [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR008195 Pfam:PF01199 PRINTS:PR01250 GO:GO:0006412
GO:GO:0003735 GO:GO:0022625 KO:K02915 OMA:KKTVQRA
InterPro:IPR018065 PANTHER:PTHR10759 PROSITE:PS01145
GeneTree:ENSGT00390000008294 EMBL:CU463349 RefSeq:XP_003129307.1
RefSeq:XP_003129308.1 RefSeq:XP_003129309.1
ProteinModelPortal:F2Z5B9 SMR:F2Z5B9 PRIDE:F2Z5B9
Ensembl:ENSSSCT00000010015 GeneID:100517840 KEGG:ssc:100517840
ArrayExpress:F2Z5B9 Uniprot:F2Z5B9
Length = 117
Score = 129 (50.5 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 27/79 (34%), Positives = 36/79 (45%)
Query: 9 KTPGGRLVYHYLKKAGKVPR--CGHCKIKLPGIEKAXXXXXXXXXXXXXXXXXXYGGVLC 66
+TPG R+VY Y KK GK P+ CG C +L G+ YGG +C
Sbjct: 24 RTPGNRIVYLYTKKVGKAPKSACGVCPGRLRGVRAVRPKVLMRLSKTKKHVSRAYGGSMC 83
Query: 67 HKCVKEKFIYCFFYSHCKI 85
KCV+++ F KI
Sbjct: 84 AKCVRDRIKRAFLIEEQKI 102
>ZFIN|ZDB-GENE-040426-1033 [details] [associations]
symbol:rpl34 "ribosomal protein L34" species:7955
"Danio rerio" [GO:0005840 "ribosome" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR008195 Pfam:PF01199 PRINTS:PR01250
ZFIN:ZDB-GENE-040426-1033 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
eggNOG:COG2174 HOGENOM:HOG000216922 KO:K02915 OMA:KKTVQRA
InterPro:IPR018065 PANTHER:PTHR10759 PROSITE:PS01145
GeneTree:ENSGT00390000008294 EMBL:BC049023 EMBL:BC062280
IPI:IPI00484810 RefSeq:NP_957416.1 UniGene:Dr.75517
MINT:MINT-6732858 STRING:Q7ZWJ7 PRIDE:Q7ZWJ7
Ensembl:ENSDART00000040771 Ensembl:ENSDART00000123520 GeneID:394097
KEGG:dre:394097 CTD:6164 HOVERGEN:HBG024280 InParanoid:Q7ZWJ7
OrthoDB:EOG4RNB9V NextBio:20815053 Bgee:Q7ZWJ7 Uniprot:Q7ZWJ7
Length = 117
Score = 128 (50.1 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 28/79 (35%), Positives = 36/79 (45%)
Query: 9 KTPGGRLVYHYLKKAGKVPR--CGHCKIKLPGIEKAXXXXXXXXXXXXXXXXXXYGGVLC 66
+TPG R+VY Y KK GK P+ CG C +L GI YGG +C
Sbjct: 24 RTPGNRIVYLYTKKTGKSPKSACGICPGRLRGIRAVRPQVLMRLSKTKKHVSRAYGGSMC 83
Query: 67 HKCVKEKFIYCFFYSHCKI 85
KCV+++ F KI
Sbjct: 84 AKCVRDRIKRAFLIEEQKI 102
>SGD|S000002135 [details] [associations]
symbol:RPL34A "Ribosomal 60S subunit protein L34A"
species:4932 "Saccharomyces cerevisiae" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA;TAS] [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=TAS]
[GO:0002181 "cytoplasmic translation" evidence=TAS]
InterPro:IPR008195 Pfam:PF01199 PRINTS:PR01250 SGD:S000002135
EMBL:BK006939 EMBL:U18813 GO:GO:0003735 GO:GO:0002181 PDB:4B6A
PDBsum:4B6A GO:GO:0022625 PDB:3IZS PDB:3U5E PDB:3U5I PDBsum:3IZS
PDBsum:3U5E PDBsum:3U5I eggNOG:COG2174 HOGENOM:HOG000216922
KO:K02915 InterPro:IPR018065 PANTHER:PTHR10759 PROSITE:PS01145
OMA:SERPRMC OrthoDB:EOG4QG0PT PIR:S53549 RefSeq:NP_010977.2
ProteinModelPortal:P87262 SMR:P87262 IntAct:P87262
MINT:MINT-1326013 STRING:P87262 PaxDb:P87262 PRIDE:P87262
EnsemblFungi:YER056C-A GeneID:856784 KEGG:sce:YER056C-A
CYGD:YER056c-a GeneTree:ENSGT00390000008294 NextBio:983000
Genevestigator:P87262 GermOnline:YER056C-A Uniprot:P87262
Length = 121
Score = 123 (48.4 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 28/78 (35%), Positives = 32/78 (41%)
Query: 8 VKTPGGRLVYHYLKKAGKVPRCGHCKIKLPGIEKAXXXXXXXXXXXXXXXXXXYGGVLCH 67
VKTPGG L ++KK P+CG C L GI YGG C
Sbjct: 23 VKTPGGILRAQHVKKLATRPKCGDCGSALQGISTLRPRQYATVSKTHKTVSRAYGGSRCA 82
Query: 68 KCVKEKFIYCFFYSHCKI 85
CVKE+ I F KI
Sbjct: 83 NCVKERIIRAFLIEEQKI 100
>SGD|S000001314 [details] [associations]
symbol:RPL34B "Ribosomal 60S subunit protein L34B"
species:4932 "Saccharomyces cerevisiae" [GO:0022625 "cytosolic
large ribosomal subunit" evidence=TAS] [GO:0006412 "translation"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003735 "structural constituent
of ribosome" evidence=IEA;TAS] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0002181 "cytoplasmic translation" evidence=TAS]
InterPro:IPR008195 Pfam:PF01199 PRINTS:PR01250 SGD:S000001314
EMBL:BK006942 GO:GO:0003735 GO:GO:0002181 EMBL:Z38060 GO:GO:0022625
HOGENOM:HOG000216922 KO:K02915 OMA:KKTVQRA InterPro:IPR018065
PANTHER:PTHR10759 PROSITE:PS01145 OrthoDB:EOG4QG0PT
GeneTree:ENSGT00390000008294 PIR:S48427 RefSeq:NP_012212.1
ProteinModelPortal:P40525 SMR:P40525 DIP:DIP-5499N IntAct:P40525
MINT:MINT-544225 STRING:P40525 EnsemblFungi:YIL052C GeneID:854759
KEGG:sce:YIL052C CYGD:YIL052c NextBio:977499 Genevestigator:P40525
GermOnline:YIL052C Uniprot:P40525
Length = 121
Score = 122 (48.0 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 27/78 (34%), Positives = 32/78 (41%)
Query: 8 VKTPGGRLVYHYLKKAGKVPRCGHCKIKLPGIEKAXXXXXXXXXXXXXXXXXXYGGVLCH 67
VKTPGG L ++KK P+CG C L GI YGG C
Sbjct: 23 VKTPGGILRAQHVKKLATRPKCGDCGSALQGISTLRPRQYATVSKTHKTVSRAYGGSRCA 82
Query: 68 KCVKEKFIYCFFYSHCKI 85
CVKE+ + F KI
Sbjct: 83 NCVKERIVRAFLIEEQKI 100
>RGD|1561086 [details] [associations]
symbol:Rpl34l1 "ribosomal protein L34-like1" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0022625 "cytosolic
large ribosomal subunit" evidence=ISO] InterPro:IPR008195
Pfam:PF01199 PRINTS:PR01250 RGD:1561086 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 InterPro:IPR018065 PANTHER:PTHR10759 PROSITE:PS01145
OMA:PGRLQGV GeneTree:ENSGT00390000008294 IPI:IPI00567847
Ensembl:ENSRNOT00000044350 NextBio:641868 Uniprot:D3ZHM1
Length = 116
Score = 119 (46.9 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 26/79 (32%), Positives = 36/79 (45%)
Query: 9 KTPGGRLVYHYLKKAGKVPR--CGHCKIKLPGIEKAXXXXXXXXXXXXXXXXXXYGGVLC 66
+TPG R+VY Y KK GK P+ CG C +L G+ YG +C
Sbjct: 24 RTPGNRIVYLYTKKVGKAPKSACGVCPGRLRGVRVVRPKVLMRLSKTKKHVSRAYGS-MC 82
Query: 67 HKCVKEKFIYCFFYSHCKI 85
KCV+++ + F KI
Sbjct: 83 AKCVRDRIKWAFLIEEQKI 101
>RGD|1595454 [details] [associations]
symbol:Rpl34-ps1 "ribosomal protein L34, pseudogene 1"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IEA] InterPro:IPR008195 Pfam:PF01199 PRINTS:PR01250
RGD:1595454 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 OMA:KKTVQRA
InterPro:IPR018065 PANTHER:PTHR10759 PROSITE:PS01145
GeneTree:ENSGT00390000008294 OrthoDB:EOG4RNB9V IPI:IPI00391753
Ensembl:ENSRNOT00000057895 Uniprot:D4A4W9
Length = 117
Score = 117 (46.2 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 25/79 (31%), Positives = 35/79 (44%)
Query: 9 KTPGGRLVYHYLKKAGKVPR--CGHCKIKLPGIEKAXXXXXXXXXXXXXXXXXXYGGVLC 66
+TPG R+VY Y KK K P+ CG C +L G+ YGG +C
Sbjct: 24 RTPGNRIVYLYTKKVRKAPKSACGVCPGRLRGVRAVRPKVLMRLSKTKKHVSRAYGGSMC 83
Query: 67 HKCVKEKFIYCFFYSHCKI 85
+CV+++ F KI
Sbjct: 84 AQCVRDRIKRAFLIEEQKI 102
>POMBASE|SPAC23A1.08c [details] [associations]
symbol:rpl3401 "60S ribosomal protein L34" species:4896
"Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic translation"
evidence=NAS] [GO:0003735 "structural constituent of ribosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006412
"translation" evidence=ISO] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=ISO] InterPro:IPR008195 Pfam:PF01199
PRINTS:PR01250 PomBase:SPAC23A1.08c EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0003735 GO:GO:0002181 GO:GO:0022625
HOGENOM:HOG000216922 KO:K02915 OMA:KKTVQRA InterPro:IPR018065
PANTHER:PTHR10759 PROSITE:PS01145 PIR:T38228 RefSeq:NP_594438.1
STRING:O42846 PRIDE:O42846 EnsemblFungi:SPAC23A1.08c.1
GeneID:2541989 KEGG:spo:SPAC23A1.08c OrthoDB:EOG4QG0PT
NextBio:20803070 Uniprot:O42846
Length = 112
Score = 114 (45.2 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 24/78 (30%), Positives = 33/78 (42%)
Query: 8 VKTPGGRLVYHYLKKAGKVPRCGHCKIKLPGIEKAXXXXXXXXXXXXXXXXXXYGGVLCH 67
+KTPG + Y ++KK G +PRCG + L GI YGG L
Sbjct: 23 IKTPGNNIRYLHIKKLGTIPRCGDTGVPLQGIPALRPREFARLSHNKKTVQRAYGGCLSA 82
Query: 68 KCVKEKFIYCFFYSHCKI 85
VK++ + F KI
Sbjct: 83 NAVKDRIVRAFLIEEQKI 100
>POMBASE|SPCC1322.15 [details] [associations]
symbol:rpl3402 "60S ribosomal protein L34" species:4896
"Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic translation"
evidence=NAS] [GO:0003735 "structural constituent of ribosome"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006412 "translation" evidence=ISO]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=ISO]
InterPro:IPR008195 Pfam:PF01199 PRINTS:PR01250 PomBase:SPCC1322.15
GO:GO:0005730 EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0003735
GO:GO:0002181 GO:GO:0022625 eggNOG:COG2174 HOGENOM:HOG000216922
KO:K02915 InterPro:IPR018065 PANTHER:PTHR10759 PROSITE:PS01145
OMA:PGRLQGV OrthoDB:EOG4QG0PT PIR:T40946 RefSeq:NP_588143.1
STRING:Q9URT8 EnsemblFungi:SPCC1322.15.1 GeneID:2538815
KEGG:spo:SPCC1322.15 NextBio:20799997 Uniprot:Q9URT8
Length = 111
Score = 113 (44.8 bits), Expect = 7.8e-07, P = 7.8e-07
Identities = 24/78 (30%), Positives = 33/78 (42%)
Query: 8 VKTPGGRLVYHYLKKAGKVPRCGHCKIKLPGIEKAXXXXXXXXXXXXXXXXXXYGGVLCH 67
+KTPG + Y ++KK G +PRCG + L GI YGG L
Sbjct: 23 IKTPGNNIRYLHIKKLGTIPRCGDTGVPLQGIPALRPREFARLSHNQKKVQRAYGGCLSA 82
Query: 68 KCVKEKFIYCFFYSHCKI 85
VK++ + F KI
Sbjct: 83 NAVKDRIVRAFLIEEQKI 100
>TAIR|locus:2202770 [details] [associations]
symbol:AT1G26880 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412
"translation" evidence=IEA;ISS] [GO:0042254 "ribosome biogenesis"
evidence=ISS] [GO:0009507 "chloroplast" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0001510 "RNA methylation"
evidence=RCA] InterPro:IPR008195 Pfam:PF01199 PRINTS:PR01250
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009507 GO:GO:0005730
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 EMBL:AC005508
EMBL:AY080712 EMBL:AY117327 EMBL:F20073 EMBL:AY088495
IPI:IPI00537998 PIR:F86395 RefSeq:NP_174010.1 UniGene:At.43919
ProteinModelPortal:Q42351 SMR:Q42351 STRING:Q42351 PaxDb:Q42351
PRIDE:Q42351 EnsemblPlants:AT1G26880.1 GeneID:838331
KEGG:ath:AT1G26880 GeneFarm:319 TAIR:At1g26880 eggNOG:COG2174
HOGENOM:HOG000216922 InParanoid:Q42351 KO:K02915 OMA:KKTVQRA
PhylomeDB:Q42351 ProtClustDB:PLN03166 Genevestigator:Q42351
GermOnline:AT1G26880 InterPro:IPR018065 PANTHER:PTHR10759
PROSITE:PS01145 Uniprot:Q42351
Length = 120
Score = 102 (41.0 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 29/90 (32%), Positives = 39/90 (43%)
Query: 8 VKTPGGRLVYHYLKKAGKVPRCGHCKIKLPGIE--KAXXXXXXXXXXXXXXXXXXYGGVL 65
VKTPGG+LVY KK P+C ++ GI + YGGVL
Sbjct: 23 VKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPSEYKRSRLSRNRRTVNRAYGGVL 82
Query: 66 CHKCVKEKFIYCFFYSHCKI--KLPGIEKA 93
V+E+ I F KI K+ ++KA
Sbjct: 83 SGSAVRERIIRAFLVEEQKIVKKVLKLQKA 112
>TAIR|locus:2026724 [details] [associations]
symbol:RPL34 "ribosomal protein L34" species:3702
"Arabidopsis thaliana" [GO:0003735 "structural constituent of
ribosome" evidence=IEA;ISS] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0005840
"ribosome" evidence=IEA;ISS] [GO:0006412 "translation"
evidence=IEA;ISS;TAS] [GO:0015934 "large ribosomal subunit"
evidence=TAS] [GO:0042254 "ribosome biogenesis" evidence=ISS]
[GO:0005774 "vacuolar membrane" evidence=IDA] [GO:0016020
"membrane" evidence=IDA] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=IDA] InterPro:IPR008195 Pfam:PF01199
PRINTS:PR01250 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005774 GO:GO:0006412 GO:GO:0003735 EMBL:AC013289
EMBL:AC021046 GO:GO:0022625 eggNOG:COG2174 HOGENOM:HOG000216922
KO:K02915 ProtClustDB:PLN03166 InterPro:IPR018065 PANTHER:PTHR10759
PROSITE:PS01145 EMBL:AF324703 EMBL:AF327531 EMBL:AF349526
EMBL:AF446885 EMBL:AY052720 EMBL:AY085544 IPI:IPI00541119
PIR:H96717 RefSeq:NP_177120.1 UniGene:At.25156
ProteinModelPortal:Q9FE65 SMR:Q9FE65 STRING:Q9FE65 PaxDb:Q9FE65
PRIDE:Q9FE65 EnsemblPlants:AT1G69620.1 GeneID:843298
KEGG:ath:AT1G69620 GeneFarm:316 TAIR:At1g69620 InParanoid:Q9FE65
OMA:PGRLQGV PhylomeDB:Q9FE65 Genevestigator:Q9FE65
GermOnline:AT1G69620 Uniprot:Q9FE65
Length = 119
Score = 98 (39.6 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 28/90 (31%), Positives = 38/90 (42%)
Query: 8 VKTPGGRLVYHYLKKAGKVPRCGHCKIKLPGIE--KAXXXXXXXXXXXXXXXXXXYGGVL 65
VKTPGG+L Y KK P+C ++ GI + YGGVL
Sbjct: 23 VKTPGGKLTYQTTKKRASGPKCPVTGKRIQGIPHLRPTEYKRSRLSRNRRTVNRAYGGVL 82
Query: 66 CHKCVKEKFIYCFFYSHCKI--KLPGIEKA 93
V+E+ I F KI K+ ++KA
Sbjct: 83 SGSAVRERIIRAFLVEEQKIVKKVLKLQKA 112
>TAIR|locus:2090759 [details] [associations]
symbol:AT3G28900 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412
"translation" evidence=IEA;ISS] [GO:0042254 "ribosome biogenesis"
evidence=ISS] [GO:0022626 "cytosolic ribosome" evidence=IDA]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=IDA]
[GO:0001510 "RNA methylation" evidence=RCA] InterPro:IPR008195
Pfam:PF01199 PRINTS:PR01250 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0006412 EMBL:AP000386 GO:GO:0003735 GO:GO:0022625
eggNOG:COG2174 HOGENOM:HOG000216922 KO:K02915 ProtClustDB:PLN03166
InterPro:IPR018065 PANTHER:PTHR10759 PROSITE:PS01145 EMBL:AY045818
EMBL:AY091359 IPI:IPI00519606 RefSeq:NP_189532.1 UniGene:At.6701
UniGene:At.68395 ProteinModelPortal:Q9LJW6 SMR:Q9LJW6 IntAct:Q9LJW6
STRING:Q9LJW6 PaxDb:Q9LJW6 PRIDE:Q9LJW6 EnsemblPlants:AT3G28900.1
GeneID:822524 KEGG:ath:AT3G28900 GeneFarm:322 TAIR:At3g28900
InParanoid:Q9LJW6 OMA:SERPRMC PhylomeDB:Q9LJW6
Genevestigator:Q9LJW6 GermOnline:AT3G28900 Uniprot:Q9LJW6
Length = 120
Score = 90 (36.7 bits), Expect = 0.00021, P = 0.00021
Identities = 26/90 (28%), Positives = 37/90 (41%)
Query: 8 VKTPGGRLVYHYLKKAGKVPRCGHCKIKLPGIE--KAXXXXXXXXXXXXXXXXXXYGGVL 65
VKTPGG+L Y K P+C ++ GI + YGGVL
Sbjct: 23 VKTPGGKLTYQTTNKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNERTVNRAYGGVL 82
Query: 66 CHKCVKEKFIYCFFYSHCKI--KLPGIEKA 93
V+E+ + F KI K+ ++KA
Sbjct: 83 SGVAVRERIVRAFLVEEQKIVKKVLKLQKA 112
>UNIPROTKB|Q29223 [details] [associations]
symbol:RPL34 "60S ribosomal protein L34" species:9823 "Sus
scrofa" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR008195 Pfam:PF01199
PRINTS:PR01250 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
eggNOG:COG2174 HOGENOM:HOG000216922 InterPro:IPR018065
PANTHER:PTHR10759 PROSITE:PS01145 HOVERGEN:HBG024280 EMBL:F14815
STRING:Q29223 PRIDE:Q29223 Uniprot:Q29223
Length = 117
Score = 89 (36.4 bits), Expect = 0.00027, P = 0.00027
Identities = 17/33 (51%), Positives = 22/33 (66%)
Query: 9 KTPGGRLVYHYLKKAGKVPR--CGHCKIKLPGI 39
+TPG R+VY Y KK GK P+ CG C +L G+
Sbjct: 24 RTPGNRIVYLYTKKVGKAPKSACGVCPGRLRGV 56
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.327 0.147 0.503 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 123 87 0.00091 102 3 12 22 0.42 29
29 0.48 30
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 21
No. of states in DFA: 390 (42 KB)
Total size of DFA: 76 KB (2065 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 5.95u 0.11s 6.06t Elapsed: 00:00:15
Total cpu time: 5.95u 0.11s 6.06t Elapsed: 00:00:15
Start: Thu Aug 15 11:15:30 2013 End: Thu Aug 15 11:15:45 2013