Query psy394
Match_columns 66
No_of_seqs 136 out of 1027
Neff 8.6
Searched_HMMs 29240
Date Fri Aug 16 21:13:27 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy394.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/394hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3tnx_A Papain; hydrolase, cyto 99.8 2.1E-21 7.2E-26 123.1 6.4 63 1-66 113-175 (363)
2 3qj3_A Cathepsin L-like protei 99.8 2.9E-20 9.9E-25 116.7 6.5 61 1-66 73-139 (331)
3 1cs8_A Human procathepsin L; p 99.8 2.4E-19 8.2E-24 111.9 6.4 59 1-66 62-120 (316)
4 1pci_A Procaricain; zymogen, h 99.8 3E-19 1E-23 111.7 6.7 62 1-66 69-130 (322)
5 2c0y_A Procathepsin S; proenzy 99.8 2E-19 6.8E-24 112.2 5.0 60 1-66 63-122 (315)
6 1by8_A Protein (procathepsin K 99.8 3.6E-19 1.2E-23 111.0 6.1 61 1-66 62-123 (314)
7 2o6x_A Procathepsin L1, secret 99.8 6.6E-19 2.3E-23 109.7 6.0 60 1-66 55-115 (310)
8 3qt4_A Cathepsin-L-like midgut 99.7 3.4E-18 1.2E-22 107.3 3.7 60 1-66 78-138 (329)
9 1xkg_A DER P I, major mite fec 99.7 1.9E-18 6.7E-23 107.7 2.3 61 1-66 48-113 (312)
10 3pdf_A Cathepsin C, dipeptidyl 99.7 1.1E-17 3.7E-22 108.2 2.4 63 1-66 168-233 (441)
11 3hhi_A Cathepsin B-like cystei 99.6 8.8E-18 3E-22 105.2 -0.4 62 1-66 33-99 (325)
12 3pbh_A Procathepsin B; thiol p 99.6 5.5E-16 1.9E-20 96.8 4.4 57 2-66 31-91 (317)
13 3i06_A Cruzipain; autocatalyti 99.4 1.5E-13 5E-18 81.6 2.4 24 43-66 1-24 (215)
14 3ioq_A CMS1MS2; caricaceae, cy 99.4 1.8E-13 6.1E-18 81.2 2.3 24 43-66 1-24 (213)
15 3kwz_A Cathepsin K; enzyme inh 99.4 1.9E-13 6.4E-18 81.0 2.2 24 43-66 1-24 (215)
16 1m6d_A Cathepsin F, catsf; pap 99.4 2.2E-13 7.5E-18 80.8 2.3 24 43-66 1-24 (214)
17 3ovx_A Cathepsin S; hydrolase, 99.4 2.3E-13 7.8E-18 80.8 2.4 24 43-66 2-25 (218)
18 1o0e_A Ervatamin C; plant cyst 99.3 2.8E-13 9.6E-18 80.2 2.3 24 43-66 1-24 (208)
19 3p5u_A Actinidin; SAD, cystein 99.3 2.9E-13 1E-17 80.5 2.4 24 43-66 1-24 (220)
20 3u8e_A Papain-like cysteine pr 99.3 3E-13 1E-17 80.6 2.4 24 43-66 1-24 (222)
21 2cio_A Papain; hydrolase/inhib 99.3 2.9E-13 1E-17 80.3 2.3 24 43-66 1-24 (212)
22 3f5v_A DER P 1 allergen; aller 99.3 2.2E-13 7.6E-18 81.1 1.8 26 41-66 8-33 (222)
23 2bdz_A Mexicain; cysteine prot 99.3 3.2E-13 1.1E-17 80.3 2.3 24 43-66 1-24 (214)
24 3bwk_A Cysteine protease falci 99.3 4.6E-13 1.6E-17 80.8 3.0 27 40-66 17-43 (243)
25 1ppo_A Protease omega; hydrola 99.3 3.5E-13 1.2E-17 80.1 2.3 24 43-66 1-24 (216)
26 2xu3_A Cathepsin L1; hydrolase 99.3 3.5E-13 1.2E-17 80.2 2.3 24 43-66 1-24 (220)
27 1cqd_A Protein (protease II); 99.3 3.5E-13 1.2E-17 80.4 2.3 25 42-66 2-26 (221)
28 1yal_A Chymopapain; hydrolase, 99.3 3.5E-13 1.2E-17 80.2 2.3 24 43-66 1-24 (218)
29 1s4v_A Cysteine endopeptidase; 99.3 4E-13 1.4E-17 80.5 2.5 25 42-66 1-25 (229)
30 1iwd_A Ervatamin B; cysteine p 99.3 3.9E-13 1.3E-17 79.9 2.4 24 43-66 1-24 (215)
31 2b1m_A SPE31; papain-like, sug 99.3 4.6E-13 1.6E-17 81.0 2.5 25 42-66 1-25 (246)
32 2fo5_A Cysteine proteinase EP- 99.3 5.8E-13 2E-17 81.4 2.5 26 41-66 2-27 (262)
33 2oul_A Falcipain 2; cysteine p 99.3 8.4E-13 2.9E-17 79.6 3.0 27 40-66 15-41 (241)
34 3f75_A Toxopain-2, cathepsin L 99.3 4.1E-13 1.4E-17 79.9 1.2 26 41-66 5-30 (224)
35 8pch_A Cathepsin H; hydrolase, 99.3 5.7E-13 2E-17 79.1 1.3 24 43-66 1-25 (220)
36 3qsd_A Cathepsin B-like peptid 99.2 1.6E-12 5.5E-17 78.8 0.6 25 42-66 2-30 (254)
37 3cbj_A Cathepsin B; cathepsin 99.2 4.2E-12 1.4E-16 77.4 0.9 26 41-66 5-34 (266)
38 3ois_A Cysteine protease; alph 99.0 5.1E-12 1.7E-16 77.9 -2.5 23 41-66 55-77 (291)
39 1deu_A Procathepsin X; cystein 98.9 2.8E-10 9.4E-15 69.9 2.0 26 41-66 34-65 (277)
40 2wbf_X Serine-repeat antigen p 98.6 7.6E-09 2.6E-13 62.8 1.6 22 45-66 9-33 (265)
41 2e01_A Cysteine proteinase 1; 97.9 1.9E-06 6.7E-11 56.2 0.8 25 42-66 52-76 (457)
42 2cb5_A Protein (bleomycin hydr 97.8 8.7E-06 3E-10 53.1 2.2 25 42-66 47-71 (453)
43 3f75_P Toxopain-2, cathepsin L 97.2 0.00019 6.5E-09 38.6 2.0 19 1-19 72-90 (106)
44 3pw3_A Aminopeptidase C; bleom 97.0 0.00019 6.3E-09 46.1 1.4 14 53-66 20-33 (383)
45 1gxg_A Colicin E8 immunity pro 69.8 3.1 0.0001 21.2 2.0 14 1-14 6-19 (85)
46 2k0d_X IMME7, colicin-E7 immun 67.1 2.8 9.7E-05 22.1 1.5 15 1-15 13-27 (101)
47 1unk_A Colicin E7; immunity pr 66.0 3.5 0.00012 21.2 1.7 14 1-14 6-19 (87)
48 1fr2_A Colicin E9 immunity pro 65.4 3.2 0.00011 21.2 1.5 14 1-14 6-19 (86)
49 3u43_A Colicin-E2 immunity pro 60.0 4.5 0.00015 21.1 1.5 14 1-14 6-19 (94)
50 1pby_C Quinohemoprotein amine 52.0 5.3 0.00018 19.9 0.9 13 45-57 64-76 (79)
51 1jmx_G Amine dehydrogenase; ox 51.8 5.3 0.00018 19.9 0.9 13 45-57 64-76 (79)
52 2xf7_A GP23.1; viral protein; 50.0 12 0.0004 16.9 1.8 12 3-14 31-42 (51)
53 2h2m_A Protein MURR1, COMM dom 44.8 6 0.00021 21.1 0.5 15 2-16 40-54 (108)
54 1wy3_A Villin; structural prot 39.3 21 0.00072 15.0 1.7 10 5-14 1-10 (35)
55 1und_A Advillin, P92; actin bi 36.7 24 0.00082 15.0 1.7 12 4-15 2-13 (37)
56 4aup_A Phospholipase A2 group 31.5 20 0.0007 19.4 1.3 15 44-58 30-44 (123)
57 1b4u_A LIGA, LIGB, protocatech 29.6 31 0.0011 19.1 1.8 15 2-16 110-124 (139)
58 2k02_A Ferrous iron transport 28.2 12 0.0004 19.0 -0.1 12 48-59 39-50 (87)
59 2yxy_A Hypothetical conserved 27.0 30 0.001 18.6 1.4 12 2-13 11-22 (115)
60 3pgb_A Putative uncharacterize 22.2 44 0.0015 23.7 1.8 13 1-13 67-79 (797)
61 2qiy_C Ubiquitin carboxyl-term 21.9 33 0.0011 15.6 0.8 12 1-12 23-34 (48)
62 3hi7_A Amiloride-sensitive ami 21.8 37 0.0013 23.8 1.3 13 1-13 12-24 (731)
63 1ik9_C DNA ligase IV; DNA END 21.6 60 0.002 13.6 1.9 15 2-16 19-33 (37)
64 2f40_A Hypothetical protein PF 21.4 17 0.00057 18.8 -0.3 12 1-12 14-25 (96)
65 1th5_A NIFU1; iron-sulfur clus 20.2 35 0.0012 16.7 0.8 12 55-66 37-48 (74)
No 1
>3tnx_A Papain; hydrolase, cytoplasm for recombinant expression; 2.62A {Carica papaya}
Probab=99.84 E-value=2.1e-21 Score=123.12 Aligned_cols=63 Identities=32% Similarity=0.484 Sum_probs=45.1
Q ss_pred CCcCCCHHHHHHHHcCCCCCcccccccccccceeeeCCCCCCCCCcccccccCCCCCCCcccCCCC
Q psy394 1 MSINWLHHEFVHMMNGFKRSTRLLGTERVEEGVTYIAPDNVKLPEEVDWRNKGAVTPIKDQGQCYK 66 (66)
Q Consensus 1 ~fsDlt~eEf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~DWR~~g~Vt~Vk~Qg~CGS 66 (66)
.|+|||.+||+++|++........ ..............+||++||||++|+||||||||.|||
T Consensus 113 ~FaDlT~eEf~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~lP~s~DWR~~g~VtpVkdQG~CGS 175 (363)
T 3tnx_A 113 VFADMSNDEFKEKYTGSIAGNYTT---TELSYEEVLNDGDVNIPEYVDWRQKGAVTPVKNQGSCGS 175 (363)
T ss_dssp TTTTSCHHHHHHHHSCSSCSCCCC---SSSSSSCCCCCSCCCCCSCEEGGGGTCCCCCCBCCSSBC
T ss_pred ccccCCHHHHHHHhcccccccccc---cccccccccCcccCCCCcceecccCCCCCCCccCCcCCc
Confidence 599999999999998755432211 011111122233467999999999999999999999997
No 2
>3qj3_A Cathepsin L-like protein; hydrolase, proteinase, larVal midgut; 1.85A {Tenebrio molitor} SCOP: d.3.1.0
Probab=99.81 E-value=2.9e-20 Score=116.66 Aligned_cols=61 Identities=26% Similarity=0.568 Sum_probs=44.0
Q ss_pred CCcCCCHHHHHHHHcCCCCCcccccccccccceeeeCC------CCCCCCCcccccccCCCCCCCcccCCCC
Q psy394 1 MSINWLHHEFVHMMNGFKRSTRLLGTERVEEGVTYIAP------DNVKLPEEVDWRNKGAVTPIKDQGQCYK 66 (66)
Q Consensus 1 ~fsDlt~eEf~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~P~~~DWR~~g~Vt~Vk~Qg~CGS 66 (66)
.|+|||.+||.++|++....... ......+... ....+|++||||++|+||||||||.|||
T Consensus 73 ~FaDlt~eEf~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~lP~s~DwR~~g~vtpVkdQg~CGS 139 (331)
T 3qj3_A 73 LFTDMTPEEMKAYTHGLIMPADL-----HKNGIPIKTREDLGLNASVRYPASFDWRDQGMVSPVKNQGSCGS 139 (331)
T ss_dssp TTTTCCHHHHHHHHSCCCCCSST-----TTTCEEECSGGGGTCCSSCCCCSSEEGGGGTCSCCCCBCCSSCC
T ss_pred ccccCCHHHHHHHhccccccccc-----cccCcccccccccccccccCCCcceecccCCccCCCccCcccch
Confidence 49999999999998876532111 0111122111 2347999999999999999999999997
No 3
>1cs8_A Human procathepsin L; prosegment, propeptide, inhibition, hydrolase; HET: OCS; 1.80A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cjl_A 3hwn_A*
Probab=99.78 E-value=2.4e-19 Score=111.86 Aligned_cols=59 Identities=39% Similarity=0.667 Sum_probs=43.4
Q ss_pred CCcCCCHHHHHHHHcCCCCCcccccccccccceeeeCCCCCCCCCcccccccCCCCCCCcccCCCC
Q psy394 1 MSINWLHHEFVHMMNGFKRSTRLLGTERVEEGVTYIAPDNVKLPEEVDWRNKGAVTPIKDQGQCYK 66 (66)
Q Consensus 1 ~fsDlt~eEf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~DWR~~g~Vt~Vk~Qg~CGS 66 (66)
.|+|||.+||.++|+|...... . ....+.......+|++||||++|+||||||||+|||
T Consensus 62 ~F~Dlt~eEf~~~~~g~~~~~~------~-~~~~~~~~~~~~lP~~~DwR~~g~vtpVkdQg~CGS 120 (316)
T 1cs8_A 62 AFGDMTSEEFRQVMNGFQNRKP------R-KGKVFQEPLFYEAPRSVDWREKGYVTPVKNQGQCGS 120 (316)
T ss_dssp TTTTCCHHHHHHHHCCBCCCCC------S-CCEECCCCTTCCCCSCEEGGGGTCCCCCCBCCSSSC
T ss_pred ccCCCCHHHHHHHhcCCCCCcc------c-cCccccCccccCCCCcEecCCCCCcCCCCcccCCcc
Confidence 4999999999988877543211 0 111222222346999999999999999999999997
No 4
>1pci_A Procaricain; zymogen, hydrolase, thiol protease; 3.20A {Carica papaya} SCOP: d.3.1.1
Probab=99.78 E-value=3e-19 Score=111.71 Aligned_cols=62 Identities=35% Similarity=0.549 Sum_probs=44.0
Q ss_pred CCcCCCHHHHHHHHcCCCCCcccccccccccceeeeCCCCCCCCCcccccccCCCCCCCcccCCCC
Q psy394 1 MSINWLHHEFVHMMNGFKRSTRLLGTERVEEGVTYIAPDNVKLPEEVDWRNKGAVTPIKDQGQCYK 66 (66)
Q Consensus 1 ~fsDlt~eEf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~DWR~~g~Vt~Vk~Qg~CGS 66 (66)
.|+|||.+||.++++|........ ......+.......+|++||||++|+||||||||+|||
T Consensus 69 ~FaDlt~eEf~~~~~g~~~~~~~~----~~~~~~~~~~~~~~lP~~~DwR~~g~vt~VkdQg~CGS 130 (322)
T 1pci_A 69 EFADLSNDEFNEKYVGSLIDATIE----QSYDEEFINEDIVNLPENVDWRKKGAVTPVRHQGSCGS 130 (322)
T ss_dssp TTTTSCHHHHHHHHCCCBCCCSSC----CCCSEECCCCCCCCSCSCEETTTTTCCCCCCBCTTSCC
T ss_pred ccccCCHHHHHHHhcCCCCccccc----cccccccccccccCCCCeEecccCCCCCCccccccCCc
Confidence 499999999999888754322110 01111122222347999999999999999999999997
No 5
>2c0y_A Procathepsin S; proenzyme, proteinase, hydrolase, thiol protease, prosegment binding loop, glycoprotein, lysosome, protease, zymogen; 2.1A {Homo sapiens}
Probab=99.78 E-value=2e-19 Score=112.20 Aligned_cols=60 Identities=32% Similarity=0.551 Sum_probs=41.5
Q ss_pred CCcCCCHHHHHHHHcCCCCCcccccccccccceeeeCCCCCCCCCcccccccCCCCCCCcccCCCC
Q psy394 1 MSINWLHHEFVHMMNGFKRSTRLLGTERVEEGVTYIAPDNVKLPEEVDWRNKGAVTPIKDQGQCYK 66 (66)
Q Consensus 1 ~fsDlt~eEf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~DWR~~g~Vt~Vk~Qg~CGS 66 (66)
.|+|||.+||.++|+|....... . ....+.......+|++||||++|+||||||||+|||
T Consensus 63 ~FaDlt~eEf~~~~~g~~~~~~~-----~-~~~~~~~~~~~~lP~~~DwR~~g~vtpVkdQg~CGS 122 (315)
T 2c0y_A 63 HLGDMTSEEVMSLMSSLRVPSQW-----Q-RNITYKSNPNRILPDSVDWREKGCVTEVKYQGSCGA 122 (315)
T ss_dssp GGGGCCHHHHHHHTTSBCCCCGG-----G-SCBCC------CCCSCEETTTTTCCCCCCBCTTSCC
T ss_pred ccccCCHHHHHHHhcCCCCCccc-----c-CCccccCcccCCCCCeEecCCCCCcCCCcCcccCCC
Confidence 49999999999888775432211 0 111121122346999999999999999999999997
No 6
>1by8_A Protein (procathepsin K); hydrolase(sulfhydryl proteinase), papain; 2.60A {Homo sapiens} SCOP: d.3.1.1 PDB: 7pck_A
Probab=99.78 E-value=3.6e-19 Score=111.01 Aligned_cols=61 Identities=34% Similarity=0.486 Sum_probs=42.7
Q ss_pred CCcCCCHHHHHHHHcCCCCCcccccccccccceeeeCCCCCC-CCCcccccccCCCCCCCcccCCCC
Q psy394 1 MSINWLHHEFVHMMNGFKRSTRLLGTERVEEGVTYIAPDNVK-LPEEVDWRNKGAVTPIKDQGQCYK 66 (66)
Q Consensus 1 ~fsDlt~eEf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~P~~~DWR~~g~Vt~Vk~Qg~CGS 66 (66)
.|+|||.+||.++|+|....... ......+....... ||++||||++|+||||||||+|||
T Consensus 62 ~FaDlt~eEf~~~~~g~~~~~~~-----~~~~~~~~~~~~~~~lP~~~DwR~~g~vtpVkdQg~CGS 123 (314)
T 1by8_A 62 HLGDMTSEEVVQKMTGLKVPLSH-----SRSNDTLYIPEWEGRAPDSVDYRKKGYVTPVKNQGQCGS 123 (314)
T ss_dssp TTSSSCHHHHHHHSCCCCCCSCC-----CCSSSSSBCCCCSSCCCSCCBSTTTTCSCCCCBCCSSSC
T ss_pred ccccCCHHHHHHHhccCCCCccc-----ccCCccccccccccCCCCeEeCCCCCCCCCcccCCCCCC
Confidence 49999999999888775432211 00111121111223 999999999999999999999997
No 7
>2o6x_A Procathepsin L1, secreted cathepsin L 1; hydrolase, thiol protease, cysteine protease, zymogen, hydro; 1.40A {Fasciola hepatica}
Probab=99.76 E-value=6.6e-19 Score=109.66 Aligned_cols=60 Identities=32% Similarity=0.601 Sum_probs=41.4
Q ss_pred CCcCCCHHHHHHHHcC-CCCCcccccccccccceeeeCCCCCCCCCcccccccCCCCCCCcccCCCC
Q psy394 1 MSINWLHHEFVHMMNG-FKRSTRLLGTERVEEGVTYIAPDNVKLPEEVDWRNKGAVTPIKDQGQCYK 66 (66)
Q Consensus 1 ~fsDlt~eEf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~DWR~~g~Vt~Vk~Qg~CGS 66 (66)
.|+|||.+||.++|+| ....... ......+.... ..||++||||++|+||||||||+|||
T Consensus 55 ~F~Dlt~eEf~~~~~g~~~~~~~~-----~~~~~~~~~~~-~~lP~~~DwR~~g~vtpVkdQg~CGS 115 (310)
T 2o6x_A 55 QFTDMTFEEFKAKYLTEMSRASDI-----LSHGVPYEANN-RAVPDKIDWRESGYVTEVKDQGNCGS 115 (310)
T ss_dssp TTTTSCHHHHHHHHCCCCCCGGGG-----SCSSEECCC-----CCSCEEGGGGTCCCCCCBCCSSCC
T ss_pred ccCCCCHHHHHHHhcCCCCCcccc-----cccCCcccccc-CCCCCeEecCcCCCCCCcccCCCCCc
Confidence 4999999999988877 4432111 00111221111 26999999999999999999999997
No 8
>3qt4_A Cathepsin-L-like midgut cysteine proteinase; hydrolase, zymogen, intramolecular DISS bonds, insect larVal midgut; HET: PG4 PG6; 2.11A {Tenebrio molitor}
Probab=99.71 E-value=3.4e-18 Score=107.27 Aligned_cols=60 Identities=28% Similarity=0.449 Sum_probs=40.4
Q ss_pred CCcCCCHHHHHHHHcCCCCCcccccccccc-cceeeeCCCCCCCCCcccccccCCCCCCCcccCCCC
Q psy394 1 MSINWLHHEFVHMMNGFKRSTRLLGTERVE-EGVTYIAPDNVKLPEEVDWRNKGAVTPIKDQGQCYK 66 (66)
Q Consensus 1 ~fsDlt~eEf~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~P~~~DWR~~g~Vt~Vk~Qg~CGS 66 (66)
.|+|||.+||.+ |+|.+...... ... ....+.... ..||++||||++ +||||||||+|||
T Consensus 78 ~FaDlt~eEf~~-~~g~~~~~~~~---~~~~~~~~~~~~~-~~lP~~~DwR~~-~vtpVkdQg~CGS 138 (329)
T 3qt4_A 78 QFGDMSKEEFLA-YVNRGKAQKPK---HPENLRMPYVSSK-KPLAASVDWRSN-AVSEVKDQGQCGS 138 (329)
T ss_dssp GGGGCCHHHHHH-HHHHTCCC---------CCEEECCCCC-SCCCSCEECTTT-SCCCCCBCCSSBC
T ss_pred ccccCCHHHHHH-hcCCccccccc---ccccccccccCCc-cCCCCCEEcccc-ccCCCccCCCCcC
Confidence 499999999999 76644211100 000 111222222 479999999999 9999999999997
No 9
>1xkg_A DER P I, major mite fecal allergen DER P 1; major allergen, cysteine protease, house DUST mite, dermatop pteronyssinus; 1.61A {Dermatophagoides pteronyssinus} SCOP: d.3.1.1
Probab=99.71 E-value=1.9e-18 Score=107.72 Aligned_cols=61 Identities=25% Similarity=0.238 Sum_probs=41.0
Q ss_pred CCcCCCHHHHHHHHcCCCCCcccccccccccceeeeCC-----CCCCCCCcccccccCCCCCCCcccCCCC
Q psy394 1 MSINWLHHEFVHMMNGFKRSTRLLGTERVEEGVTYIAP-----DNVKLPEEVDWRNKGAVTPIKDQGQCYK 66 (66)
Q Consensus 1 ~fsDlt~eEf~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~P~~~DWR~~g~Vt~Vk~Qg~CGS 66 (66)
.|+|||.+||.+++++....... ......+... ....+|++||||++|+||||||||+|||
T Consensus 48 ~F~Dlt~eEf~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~lP~~~DwR~~g~vtpVkdQg~CGS 113 (312)
T 1xkg_A 48 HLSDLSLDEFKNRFLMSAEAFEH-----LKTQFDLNAETNACSINGNAPAEIDLRQMRTVTPIRMQGGCGS 113 (312)
T ss_dssp TTTTSCHHHHHHHHSBCHHHHHH-----HHHHHC-----CBCCCCSCCCSCEETTTTTCCCCCCBCCSSBC
T ss_pred cccCCCHHHHHHHhcCCCCcccc-----ccCCcccccccccccccccCCCccccccCCCcCCccccCCCCc
Confidence 49999999999977763221110 0000111111 1137999999999999999999999997
No 10
>3pdf_A Cathepsin C, dipeptidyl peptidase 1; two domains, cystein protease, hydrolase-hydrolase inhibitor; HET: LXV NAG; 1.85A {Homo sapiens} PDB: 1jqp_A* 2djf_B* 1k3b_B* 2djg_B* 2djf_A* 1k3b_A* 2djg_A* 2djf_C* 1k3b_C* 2djg_C*
Probab=99.67 E-value=1.1e-17 Score=108.24 Aligned_cols=63 Identities=21% Similarity=0.296 Sum_probs=23.4
Q ss_pred CCcCCCHHHHHHHHcCCCCCcccccccccccceeeeCCCCCCCCCcccccccC---CCCCCCcccCCCC
Q psy394 1 MSINWLHHEFVHMMNGFKRSTRLLGTERVEEGVTYIAPDNVKLPEEVDWRNKG---AVTPIKDQGQCYK 66 (66)
Q Consensus 1 ~fsDlt~eEf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~DWR~~g---~Vt~Vk~Qg~CGS 66 (66)
.|+|||.+||++++++........ ...............||++||||+++ +||||||||+|||
T Consensus 168 ~faDlT~eEf~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~lP~s~DwR~~~g~~~VtpVkdQG~CGS 233 (441)
T 3pdf_A 168 EYETLTLGDMIRRSGGHSRKIPRP---KPAPLTAEIQQKILFLPTSWDWRNVHGINFVSPVRNQASCGS 233 (441)
T ss_dssp -----------------------------------------CCCSCEETTCBTTBCCSCCCCBCTTSBC
T ss_pred ccccCCHHHHHHHhCCCccccccc---ccCccccccccccccCCCCEECCcCCCCCccCcccccCCCch
Confidence 489999999999887653221110 00000111112235799999999974 8999999999997
No 11
>3hhi_A Cathepsin B-like cysteine protease; occluding loop, hydrolase, THIO protease; HET: 074; 1.60A {Trypanosoma brucei} SCOP: d.3.1.0 PDB: 4hwy_A* 3mor_A*
Probab=99.65 E-value=8.8e-18 Score=105.20 Aligned_cols=62 Identities=16% Similarity=0.198 Sum_probs=26.0
Q ss_pred CCcCCCHHHHHHHHcCCCCCcccccccccccceeeeC-CCCCCCCCccccccc----CCCCCCCcccCCCC
Q psy394 1 MSINWLHHEFVHMMNGFKRSTRLLGTERVEEGVTYIA-PDNVKLPEEVDWRNK----GAVTPIKDQGQCYK 66 (66)
Q Consensus 1 ~fsDlt~eEf~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~P~~~DWR~~----g~Vt~Vk~Qg~CGS 66 (66)
.|+|||.+||++++ |........ .......+.. .....||++||||++ |+||||||||+|||
T Consensus 33 ~f~dlt~eE~~~~~-g~~~~~~~~---~~~~~~~~~~~~~~~~lP~s~DwR~~w~~~g~vtpVkdQg~CGS 99 (325)
T 3hhi_A 33 VMQNITLREAKRLN-GVIKKNNNA---SILPKRRFTEEEARAPLPSSFDSAEAWPNCPTIPQIADQSACGS 99 (325)
T ss_dssp ---------------------------CCSCBCCCCHHHHHCCCCSCEEHHHHSTTCTTTTCCCBCCSSBC
T ss_pred ccccCCHHHHHHHh-CCCCCCccc---ccccCccccccccccCCCCcEehhHhcCCCCccccccCCCCccc
Confidence 49999999999865 433221100 0000111110 112479999999999 89999999999997
No 12
>3pbh_A Procathepsin B; thiol protease, cysteine protease, proenzyme, papain; 2.50A {Homo sapiens} SCOP: d.3.1.1 PDB: 2pbh_A 1pbh_A 1mir_A
Probab=99.60 E-value=5.5e-16 Score=96.76 Aligned_cols=57 Identities=21% Similarity=0.248 Sum_probs=39.4
Q ss_pred CcCCCHHHHHHHHcCCCCCcccccccccccceeeeCCCCCCCCCccccccc----CCCCCCCcccCCCC
Q psy394 2 SINWLHHEFVHMMNGFKRSTRLLGTERVEEGVTYIAPDNVKLPEEVDWRNK----GAVTPIKDQGQCYK 66 (66)
Q Consensus 2 fsDlt~eEf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~DWR~~----g~Vt~Vk~Qg~CGS 66 (66)
|+|++.||++. |+|....... ....+.......||++||||++ |+||||||||+|||
T Consensus 31 f~~~~~e~~~~-~lg~~~~~~~-------~~~~~~~~~~~~lP~s~DwR~~~~~c~~vtpVkdQg~CGS 91 (317)
T 3pbh_A 31 FYNVDMSYLKR-LCGTFLGGPK-------PPQRVMFTEDLKLPASFDAREQWPQCPTIKEIRDQGSCGS 91 (317)
T ss_dssp CSSCCHHHHHH-TCCBCTTCCC-------CSEEECCCSCCCCCSSEEHHHHCTTCGGGTCCCBCCSSCC
T ss_pred cccCCHHHHHH-HcCCCCCccc-------cCcccccccccCCCCCEechhccCCCCCcCCccccCCccc
Confidence 78888877776 5565433221 1111222223579999999998 68999999999997
No 13
>3i06_A Cruzipain; autocatalytic cleavage, glycoprotein, protease, thiol protease, zymogen; HET: QL2; 1.10A {Trypanosoma cruzi} SCOP: d.3.1.1 PDB: 1ewm_A* 1ewo_A* 1ewl_A* 1f29_A* 1ewp_A* 1f2b_A* 1f2c_A* 1f2a_A* 1me4_A* 1u9q_X* 2aim_A* 2efm_A* 2oz2_A* 1me3_A* 3kku_A* 3lxs_A* 1aim_A* 3iut_A* 3hd3_A* 2p86_A* ...
Probab=99.37 E-value=1.5e-13 Score=81.65 Aligned_cols=24 Identities=63% Similarity=1.132 Sum_probs=23.2
Q ss_pred CCCcccccccCCCCCCCcccCCCC
Q psy394 43 LPEEVDWRNKGAVTPIKDQGQCYK 66 (66)
Q Consensus 43 ~P~~~DWR~~g~Vt~Vk~Qg~CGS 66 (66)
+|++||||++|+||||||||.|||
T Consensus 1 lP~~~Dwr~~g~vtpVkdQg~cGs 24 (215)
T 3i06_A 1 APAAVDWRARGAVTAVKDQGQCGS 24 (215)
T ss_dssp CCSEEEGGGGTCCCCCCBCCSSCC
T ss_pred CCCcccCCcCCCCCCCCCCCCCcc
Confidence 699999999999999999999997
No 14
>3ioq_A CMS1MS2; caricaceae, cysteine protease, papain family, hydrolase; HET: E64 SO4; 1.87A {Carica candamarcensis} SCOP: d.3.1.1
Probab=99.36 E-value=1.8e-13 Score=81.17 Aligned_cols=24 Identities=54% Similarity=1.214 Sum_probs=23.2
Q ss_pred CCCcccccccCCCCCCCcccCCCC
Q psy394 43 LPEEVDWRNKGAVTPIKDQGQCYK 66 (66)
Q Consensus 43 ~P~~~DWR~~g~Vt~Vk~Qg~CGS 66 (66)
||++||||++|+||||||||.|||
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGs 24 (213)
T 3ioq_A 1 IPTSIDWRQKGAVTPVRNQGGCGS 24 (213)
T ss_dssp CCSCEEGGGGTCCCCCCBCTTSBC
T ss_pred CCCCCCcccCCCCCCCCcCCCChh
Confidence 699999999999999999999997
No 15
>3kwz_A Cathepsin K; enzyme inhibitor, covalent reversible inhibitor, disease mutation, disulfide bond, glycoprotein, hydrolase, lysosome, protease; HET: KWZ; 1.49A {Homo sapiens} PDB: 1au0_A* 1au2_A* 1au3_A* 1au4_A* 1ayu_A* 1ayv_A* 1ayw_A* 1bgo_A* 1atk_A* 1nl6_A* 1nlj_A* 1q6k_A* 1mem_A* 1yk7_A* 1yk8_A* 1yt7_A* 2ato_A* 2aux_A* 2auz_A* 2bdl_A* ...
Probab=99.36 E-value=1.9e-13 Score=81.02 Aligned_cols=24 Identities=58% Similarity=1.057 Sum_probs=23.2
Q ss_pred CCCcccccccCCCCCCCcccCCCC
Q psy394 43 LPEEVDWRNKGAVTPIKDQGQCYK 66 (66)
Q Consensus 43 ~P~~~DWR~~g~Vt~Vk~Qg~CGS 66 (66)
||++||||++|+|+||||||+|||
T Consensus 1 lP~~~Dwr~~~~v~pvkdQg~cGs 24 (215)
T 3kwz_A 1 APDSVDYRKKGYVTPVKNQGQCGS 24 (215)
T ss_dssp CTTCEETTTTTCCCCCCBCTTSBC
T ss_pred CCCCCccCcCCCCCCcccCCCCcH
Confidence 699999999999999999999997
No 16
>1m6d_A Cathepsin F, catsf; papain family cysteine protease, hydrolase; HET: MYP; 1.70A {Homo sapiens} SCOP: d.3.1.1
Probab=99.36 E-value=2.2e-13 Score=80.84 Aligned_cols=24 Identities=63% Similarity=1.052 Sum_probs=23.2
Q ss_pred CCCcccccccCCCCCCCcccCCCC
Q psy394 43 LPEEVDWRNKGAVTPIKDQGQCYK 66 (66)
Q Consensus 43 ~P~~~DWR~~g~Vt~Vk~Qg~CGS 66 (66)
||++||||++|+|+||||||.|||
T Consensus 1 lP~~~DwR~~~~vt~VkdQg~cGs 24 (214)
T 1m6d_A 1 APPEWDWRSKGAVTKVKDQGMCGS 24 (214)
T ss_dssp CCSCEEGGGGTCCCCCCBCCSSBC
T ss_pred CCCcCcCCCCCCCCCCccCCCCch
Confidence 699999999999999999999997
No 17
>3ovx_A Cathepsin S; hydrolase, covalent inhibitor, aldehyde warhead is covalently bound to Cys25, lysosomeal protein; HET: O64; 1.49A {Homo sapiens} SCOP: d.3.1.1 PDB: 2h7j_A* 2f1g_A* 2hh5_B* 2hhn_A* 2hxz_A* 2op3_A* 2frq_A* 2fra_A* 2fq9_A* 2ft2_A* 2fud_A* 2g7y_A* 1ms6_A* 2r9m_A* 2r9n_A* 2r9o_A* 3n3g_A* 3n4c_A* 3mpe_A* 1nqc_A* ...
Probab=99.36 E-value=2.3e-13 Score=80.79 Aligned_cols=24 Identities=58% Similarity=1.085 Sum_probs=23.3
Q ss_pred CCCcccccccCCCCCCCcccCCCC
Q psy394 43 LPEEVDWRNKGAVTPIKDQGQCYK 66 (66)
Q Consensus 43 ~P~~~DWR~~g~Vt~Vk~Qg~CGS 66 (66)
||++||||++|+||||||||.|||
T Consensus 2 lP~~~DwR~~~~vtpVkdQg~cGs 25 (218)
T 3ovx_A 2 LPDSVDWREKGCVTEVKYQGSCGA 25 (218)
T ss_dssp CCSCEEGGGGTCCCCCCBCTTSCC
T ss_pred CCCCCCcccCCCCCCCccCCCCcc
Confidence 799999999999999999999997
No 18
>1o0e_A Ervatamin C; plant cysteine protease, two domain, stable at PH 2-12, HYDR; 1.90A {Tabernaemontana divaricata} SCOP: d.3.1.1 PDB: 2pns_A* 2pre_A* 3bcn_A*
Probab=99.34 E-value=2.8e-13 Score=80.18 Aligned_cols=24 Identities=67% Similarity=1.327 Sum_probs=23.2
Q ss_pred CCCcccccccCCCCCCCcccCCCC
Q psy394 43 LPEEVDWRNKGAVTPIKDQGQCYK 66 (66)
Q Consensus 43 ~P~~~DWR~~g~Vt~Vk~Qg~CGS 66 (66)
||++||||++|+|+||||||.|||
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGs 24 (208)
T 1o0e_A 1 LPEQIDWRKKGAVTPVKNQGSCGS 24 (208)
T ss_dssp CCSCEEGGGGTCCCCCCBCCSSBC
T ss_pred CCCcCcCCCCCCCCCCccCCCCcc
Confidence 699999999999999999999997
No 19
>3p5u_A Actinidin; SAD, cysteine proteinases, hydrolase; 1.50A {Actinidia arguta} SCOP: d.3.1.1 PDB: 3p5v_A 3p5w_A 3p5x_A 1aec_A* 2act_A
Probab=99.34 E-value=2.9e-13 Score=80.51 Aligned_cols=24 Identities=67% Similarity=1.149 Sum_probs=23.2
Q ss_pred CCCcccccccCCCCCCCcccCCCC
Q psy394 43 LPEEVDWRNKGAVTPIKDQGQCYK 66 (66)
Q Consensus 43 ~P~~~DWR~~g~Vt~Vk~Qg~CGS 66 (66)
||++||||++|+||||||||.|||
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGs 24 (220)
T 3p5u_A 1 LPDYVDWRSSGAVVDIKDQGQCGS 24 (220)
T ss_dssp CCSCEETTTTTCSCCCCBCCSSBC
T ss_pred CCCCCcCCcCCCCCCCCcCCCChh
Confidence 699999999999999999999997
No 20
>3u8e_A Papain-like cysteine protease; papain-like cysteine peptidase, peptidase_C1A, hydrolase, in form; 1.31A {Crocus sativus} SCOP: d.3.1.0
Probab=99.34 E-value=3e-13 Score=80.65 Aligned_cols=24 Identities=58% Similarity=1.093 Sum_probs=23.2
Q ss_pred CCCcccccccCCCCCCCcccCCCC
Q psy394 43 LPEEVDWRNKGAVTPIKDQGQCYK 66 (66)
Q Consensus 43 ~P~~~DWR~~g~Vt~Vk~Qg~CGS 66 (66)
||++||||++|+|+||||||.|||
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGS 24 (222)
T 3u8e_A 1 APASIDWRKKGAVTSVKDQGACGM 24 (222)
T ss_dssp CCSCEEGGGGTCCCCCCBCCSCSS
T ss_pred CCCcCcCCcCCCCCCcccCCCCcc
Confidence 699999999999999999999997
No 21
>2cio_A Papain; hydrolase/inhibitor, complex hydrolase/inhibitor, ICP, cysteine protease, allergen, protease, thiol protease; 1.5A {Carica papaya} PDB: 1khq_A 1khp_A 1ppn_A 3e1z_B 3ima_A 3lfy_A 9pap_A 1bqi_A* 1bp4_A* 1pad_A 1pe6_A* 1pip_A* 1pop_A* 1ppd_A 1ppp_A* 1stf_E* 2pad_A 4pad_A* 5pad_A* 6pad_A* ...
Probab=99.34 E-value=2.9e-13 Score=80.26 Aligned_cols=24 Identities=67% Similarity=1.252 Sum_probs=23.2
Q ss_pred CCCcccccccCCCCCCCcccCCCC
Q psy394 43 LPEEVDWRNKGAVTPIKDQGQCYK 66 (66)
Q Consensus 43 ~P~~~DWR~~g~Vt~Vk~Qg~CGS 66 (66)
||++||||++|+|+||||||.|||
T Consensus 1 lP~~~DwR~~~~v~pVkdQg~CGs 24 (212)
T 2cio_A 1 IPEYVDWRQKGAVTPVKNQGSCGS 24 (212)
T ss_dssp CCSCEETTTTTCCCCCCBCCSSBC
T ss_pred CCCcccCCCCCCCCCCccCCccch
Confidence 699999999999999999999997
No 22
>3f5v_A DER P 1 allergen; allergy, asthma, DUST mites, glycoprotein, hydrola protease, secreted, thiol protease; HET: P6G; 1.36A {Dermatophagoides pteronyssinus} PDB: 2as8_A 3rvw_A* 3rvx_A 3rvv_A* 3d6s_A*
Probab=99.34 E-value=2.2e-13 Score=81.07 Aligned_cols=26 Identities=42% Similarity=0.658 Sum_probs=24.8
Q ss_pred CCCCCcccccccCCCCCCCcccCCCC
Q psy394 41 VKLPEEVDWRNKGAVTPIKDQGQCYK 66 (66)
Q Consensus 41 ~~~P~~~DWR~~g~Vt~Vk~Qg~CGS 66 (66)
..||++||||++|+||||||||.|||
T Consensus 8 ~~lP~~~DwR~~~~vtpVkdQg~cGs 33 (222)
T 3f5v_A 8 GNAPAEIDLRQMRTVTPIRMQGGCGS 33 (222)
T ss_dssp CCCCSCEEHHHHTCSCCCCBCCSSBC
T ss_pred cCCCCCCCCccCCCCCCCCCCCCChh
Confidence 47999999999999999999999997
No 23
>2bdz_A Mexicain; cysteine protease, peptidase_C1, papain-like, HYDR; HET: E64; 2.10A {Jacaratia mexicana}
Probab=99.34 E-value=3.2e-13 Score=80.25 Aligned_cols=24 Identities=58% Similarity=1.161 Sum_probs=23.2
Q ss_pred CCCcccccccCCCCCCCcccCCCC
Q psy394 43 LPEEVDWRNKGAVTPIKDQGQCYK 66 (66)
Q Consensus 43 ~P~~~DWR~~g~Vt~Vk~Qg~CGS 66 (66)
||++||||++|+|+||||||.|||
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGs 24 (214)
T 2bdz_A 1 YPESIDWREKGAVTPVKNQNPCGS 24 (214)
T ss_dssp CCSCEETTTTTCCCCCCBCTTSBC
T ss_pred CCCcEeCCCCCCCCCCccCCCCcc
Confidence 699999999999999999999997
No 24
>3bwk_A Cysteine protease falcipain-3; malaria, hydrolase; HET: C1P; 2.42A {Plasmodium falciparum} PDB: 3bpm_A*
Probab=99.34 E-value=4.6e-13 Score=80.81 Aligned_cols=27 Identities=41% Similarity=0.608 Sum_probs=25.2
Q ss_pred CCCCCCcccccccCCCCCCCcccCCCC
Q psy394 40 NVKLPEEVDWRNKGAVTPIKDQGQCYK 66 (66)
Q Consensus 40 ~~~~P~~~DWR~~g~Vt~Vk~Qg~CGS 66 (66)
...||++||||++|+|+||||||.|||
T Consensus 17 ~~~lP~~~DwR~~~~vtpVkdQg~cGs 43 (243)
T 3bwk_A 17 AKLDRIAYDWRLHGGVTPVKDQALCGS 43 (243)
T ss_dssp CCCCCSCEEGGGTTCCCCCCBCCSSCC
T ss_pred cccCCCceecCcCCCCCCCccCCCCch
Confidence 457999999999999999999999997
No 25
>1ppo_A Protease omega; hydrolase(thiol protease); 1.80A {Carica papaya} SCOP: d.3.1.1 PDB: 1meg_A*
Probab=99.34 E-value=3.5e-13 Score=80.13 Aligned_cols=24 Identities=67% Similarity=1.288 Sum_probs=23.2
Q ss_pred CCCcccccccCCCCCCCcccCCCC
Q psy394 43 LPEEVDWRNKGAVTPIKDQGQCYK 66 (66)
Q Consensus 43 ~P~~~DWR~~g~Vt~Vk~Qg~CGS 66 (66)
||++||||++|+|+||||||.|||
T Consensus 1 lP~~~DwR~~~~v~pVkdQg~cGs 24 (216)
T 1ppo_A 1 LPENVDWRKKGAVTPVRHQGSCGS 24 (216)
T ss_dssp CCSCEETTTTTCCCCCCBCCSSBC
T ss_pred CCCcCcCCCCCCCCCCccCCcCcc
Confidence 699999999999999999999997
No 26
>2xu3_A Cathepsin L1; hydrolase, drug design, thiol protease; HET: XU3 BTB; 0.90A {Homo sapiens} PDB: 2xu4_A* 2xu5_A* 2yj2_A* 2yj8_A* 2yj9_A* 2yjb_A* 2yjc_A* 3bc3_A* 3h89_A* 3h8b_A* 3h8c_A* 3of9_A* 3of8_A* 3hha_A* 2xu1_A* 3iv2_A* 3k24_A* 2nqd_B* 3kse_A* 2vhs_A ...
Probab=99.33 E-value=3.5e-13 Score=80.18 Aligned_cols=24 Identities=63% Similarity=1.167 Sum_probs=23.2
Q ss_pred CCCcccccccCCCCCCCcccCCCC
Q psy394 43 LPEEVDWRNKGAVTPIKDQGQCYK 66 (66)
Q Consensus 43 ~P~~~DWR~~g~Vt~Vk~Qg~CGS 66 (66)
||++||||++|+|+||||||.|||
T Consensus 1 lP~~~DwR~~~~v~pVkdQg~cGs 24 (220)
T 2xu3_A 1 APRSVDWREKGYVTPVKNQGQCGS 24 (220)
T ss_dssp CCSCEEGGGGTCCCCCCBCCSSBC
T ss_pred CCCcEeCCCCCCCCCCcccCcccH
Confidence 699999999999999999999997
No 27
>1cqd_A Protein (protease II); cysteine protease, glycoprotein, proline specificity, carboh papain family, hydrolase; HET: NAG FUL FUC; 2.10A {Zingiber officinale} SCOP: d.3.1.1
Probab=99.33 E-value=3.5e-13 Score=80.36 Aligned_cols=25 Identities=52% Similarity=1.169 Sum_probs=23.5
Q ss_pred CCCCcccccccCCCCCCCcccCCCC
Q psy394 42 KLPEEVDWRNKGAVTPIKDQGQCYK 66 (66)
Q Consensus 42 ~~P~~~DWR~~g~Vt~Vk~Qg~CGS 66 (66)
.||++||||++|+|+||||||+|||
T Consensus 2 ~lP~~~DwR~~~~v~~VkdQg~cGs 26 (221)
T 1cqd_A 2 DLPDSIDWRENGAVVPVKNQGGCGS 26 (221)
T ss_dssp -CCSCEETTTTTCCCCCCBCTTSBC
T ss_pred CCCCcCcCCCCCCcCCcccCCCCcc
Confidence 5899999999999999999999997
No 28
>1yal_A Chymopapain; hydrolase, thiol protease; 1.70A {Carica papaya} SCOP: d.3.1.1 PDB: 1gec_E*
Probab=99.33 E-value=3.5e-13 Score=80.17 Aligned_cols=24 Identities=58% Similarity=1.204 Sum_probs=23.2
Q ss_pred CCCcccccccCCCCCCCcccCCCC
Q psy394 43 LPEEVDWRNKGAVTPIKDQGQCYK 66 (66)
Q Consensus 43 ~P~~~DWR~~g~Vt~Vk~Qg~CGS 66 (66)
||++||||++|+|+||||||.|||
T Consensus 1 lP~~~DwR~~~~v~pVkdQg~cGs 24 (218)
T 1yal_A 1 YPQSIDWRAKGAVTPVKNQGACGS 24 (218)
T ss_dssp CCSCEETTTTTCCCCCCBCCSSBC
T ss_pred CCCcCcCCCCCCCCCCccCccchh
Confidence 699999999999999999999997
No 29
>1s4v_A Cysteine endopeptidase; KDEL ER retention signal, endosperm, ricinosomes, SEED germi senescence, hydrolase-hydrolase inhibitor complex; 2.00A {Ricinus communis} SCOP: d.3.1.1
Probab=99.33 E-value=4e-13 Score=80.50 Aligned_cols=25 Identities=64% Similarity=1.153 Sum_probs=23.8
Q ss_pred CCCCcccccccCCCCCCCcccCCCC
Q psy394 42 KLPEEVDWRNKGAVTPIKDQGQCYK 66 (66)
Q Consensus 42 ~~P~~~DWR~~g~Vt~Vk~Qg~CGS 66 (66)
+||++||||++|+|+||||||.|||
T Consensus 1 ~lP~~~DwR~~~~vtpVkdQg~cGs 25 (229)
T 1s4v_A 1 TVPASVDWRKKGAVTSVKDQGQCGS 25 (229)
T ss_dssp CCCSCEETTTTTCCCCCCBCCSSBC
T ss_pred CCCCCEeCCCCCCCCCCccCccchH
Confidence 4899999999999999999999997
No 30
>1iwd_A Ervatamin B; cysteine protease, alpha-beta protein, catalytic DYAD, L-DOM domain., hydrolase; 1.63A {Tabernaemontana divaricata} SCOP: d.3.1.1
Probab=99.33 E-value=3.9e-13 Score=79.92 Aligned_cols=24 Identities=63% Similarity=1.021 Sum_probs=23.2
Q ss_pred CCCcccccccCCCCCCCcccCCCC
Q psy394 43 LPEEVDWRNKGAVTPIKDQGQCYK 66 (66)
Q Consensus 43 ~P~~~DWR~~g~Vt~Vk~Qg~CGS 66 (66)
||++||||++|+|+||||||.|||
T Consensus 1 lP~~~DwR~~~~v~~VkdQg~cGs 24 (215)
T 1iwd_A 1 LPSFVDWRSKGAVNSIKNQKQCGS 24 (215)
T ss_dssp CCSCEEGGGGTCSCCCCBCCSSBC
T ss_pred CCCcEeCCCCCCCCCcccCCCCch
Confidence 699999999999999999999997
No 31
>2b1m_A SPE31; papain-like, sugar binding protein; HET: NAG FUC PG4; 2.00A {Pachyrhizus erosus} PDB: 2b1n_A*
Probab=99.32 E-value=4.6e-13 Score=81.03 Aligned_cols=25 Identities=48% Similarity=0.852 Sum_probs=23.4
Q ss_pred CCCCcccccccCCCCCCCcccCCCC
Q psy394 42 KLPEEVDWRNKGAVTPIKDQGQCYK 66 (66)
Q Consensus 42 ~~P~~~DWR~~g~Vt~Vk~Qg~CGS 66 (66)
+||++||||++|+|+||||||.|||
T Consensus 1 ~lP~~~DwR~~g~vtpVkdQg~CGs 25 (246)
T 2b1m_A 1 DAPESWDWSKKGVITKVKFQGQCGS 25 (246)
T ss_dssp -CCSCEEGGGTTCCCCCCBCCSSCC
T ss_pred CCCCcCCCCCCCCCCCcccCCCCch
Confidence 4899999999999999999999997
No 32
>2fo5_A Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cysteine endoprotease, endopeptidase, LEUP hydrolase; HET: AR7; 2.20A {Hordeum vulgare}
Probab=99.31 E-value=5.8e-13 Score=81.37 Aligned_cols=26 Identities=62% Similarity=1.081 Sum_probs=24.1
Q ss_pred CCCCCcccccccCCCCCCCcccCCCC
Q psy394 41 VKLPEEVDWRNKGAVTPIKDQGQCYK 66 (66)
Q Consensus 41 ~~~P~~~DWR~~g~Vt~Vk~Qg~CGS 66 (66)
..||++||||++|+||||||||.|||
T Consensus 2 ~~lP~~~DwR~~g~vtpVkdQg~CGS 27 (262)
T 2fo5_A 2 SDLPPSVDWRQKGAVTGVKDQGKCGS 27 (262)
T ss_dssp -CCCSCEETTTTTCCCCCCBCTTSCC
T ss_pred CCCCCcccCCCCCCCCCCCCCCCCch
Confidence 36899999999999999999999997
No 33
>2oul_A Falcipain 2; cysteine protease, inhibitor, macromolecular interaction, HY hydrolase inhibitor complex; 2.20A {Plasmodium falciparum} SCOP: d.3.1.1 PDB: 2ghu_A 1yvb_A 3bpf_A* 3pnr_A
Probab=99.31 E-value=8.4e-13 Score=79.59 Aligned_cols=27 Identities=37% Similarity=0.565 Sum_probs=25.1
Q ss_pred CCCCCCcccccccCCCCCCCcccCCCC
Q psy394 40 NVKLPEEVDWRNKGAVTPIKDQGQCYK 66 (66)
Q Consensus 40 ~~~~P~~~DWR~~g~Vt~Vk~Qg~CGS 66 (66)
...||++||||++|+|+||||||.|||
T Consensus 15 ~~~lP~~~DwR~~~~vtpVkdQg~CGs 41 (241)
T 2oul_A 15 ENFDHAAYDWRLHSGVTPVKDQKNCGS 41 (241)
T ss_dssp CCCCSSCEEGGGTTCCCCCCBCCSSBC
T ss_pred cccCCCccccCcCCCCCCCccCccchH
Confidence 356999999999999999999999997
No 34
>3f75_A Toxopain-2, cathepsin L protease; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} SCOP: d.3.1.0
Probab=99.30 E-value=4.1e-13 Score=79.90 Aligned_cols=26 Identities=54% Similarity=1.068 Sum_probs=24.5
Q ss_pred CCCCCcccccccCCCCCCCcccCCCC
Q psy394 41 VKLPEEVDWRNKGAVTPIKDQGQCYK 66 (66)
Q Consensus 41 ~~~P~~~DWR~~g~Vt~Vk~Qg~CGS 66 (66)
..||++||||++|+|+||||||+|||
T Consensus 5 ~~lP~~~Dwr~~~~v~pVkdQg~cGs 30 (224)
T 3f75_A 5 SELPAGVDWRSRGCVTPVKDQRDCGS 30 (224)
T ss_dssp GGSCSCEEHHHHTCCCCCCBCCSSSC
T ss_pred cCCCCceecccCCCCCCCccCCCCcc
Confidence 36899999999999999999999997
No 35
>8pch_A Cathepsin H; hydrolase, protease, cysteine proteinase, aminopeptidase; HET: NAG BMA; 2.10A {Sus scrofa} SCOP: d.3.1.1 PDB: 1nb3_A* 1nb5_A*
Probab=99.29 E-value=5.7e-13 Score=79.15 Aligned_cols=24 Identities=50% Similarity=1.095 Sum_probs=23.1
Q ss_pred CCCcccccccC-CCCCCCcccCCCC
Q psy394 43 LPEEVDWRNKG-AVTPIKDQGQCYK 66 (66)
Q Consensus 43 ~P~~~DWR~~g-~Vt~Vk~Qg~CGS 66 (66)
||++||||++| +||||||||.|||
T Consensus 1 lP~~~DwR~~~~~vtpVkdQg~cGs 25 (220)
T 8pch_A 1 YPPSMDWRKKGNFVSPVKNQGSCGS 25 (220)
T ss_dssp CCSCEEHHHHSSCSCCCCBCTTSCC
T ss_pred CCCCEecCcCCCcCCcccccCCCch
Confidence 69999999999 8999999999997
No 36
>3qsd_A Cathepsin B-like peptidase (C01 family); cysteine peptidase, digestive tract, hydrolase-hydrolase INH complex; HET: 074; 1.30A {Schistosoma mansoni} SCOP: d.3.1.0 PDB: 3s3q_A* 3s3r_A*
Probab=99.21 E-value=1.6e-12 Score=78.76 Aligned_cols=25 Identities=32% Similarity=0.662 Sum_probs=23.6
Q ss_pred CCCCccccccc----CCCCCCCcccCCCC
Q psy394 42 KLPEEVDWRNK----GAVTPIKDQGQCYK 66 (66)
Q Consensus 42 ~~P~~~DWR~~----g~Vt~Vk~Qg~CGS 66 (66)
+||++||||++ |+||||||||+|||
T Consensus 2 ~lP~s~D~R~~~~~~~~vtpVkdQg~CGS 30 (254)
T 3qsd_A 2 EIPSSFDSRKKWPRCKSIATIRDQSRCGS 30 (254)
T ss_dssp CCCSCEEHHHHCTTCGGGGCCCBCCSSBC
T ss_pred CCCCcCccccccCCCCccCCCCCcccCcc
Confidence 58999999999 68999999999997
No 37
>3cbj_A Cathepsin B; cathepsin B, occluding loop, chagas disease, glyco hydrolase, lysosome, protease, thiol protease, zymogen, CYT vesicle; 1.80A {Homo sapiens} PDB: 3cbk_A 1gmy_A* 3ai8_B* 3k9m_A 1the_A* 1cpj_A* 1cte_A 2dcc_A* 2dc6_A* 1ito_A* 2dc8_A* 2dc9_A* 2dca_A* 2dcb_A* 2dc7_A* 2dcd_A* 1qdq_A* 1csb_B* 1huc_B 2ipp_B ...
Probab=99.17 E-value=4.2e-12 Score=77.38 Aligned_cols=26 Identities=38% Similarity=0.709 Sum_probs=24.2
Q ss_pred CCCCCccccccc----CCCCCCCcccCCCC
Q psy394 41 VKLPEEVDWRNK----GAVTPIKDQGQCYK 66 (66)
Q Consensus 41 ~~~P~~~DWR~~----g~Vt~Vk~Qg~CGS 66 (66)
..||++||||++ |+|+||||||.|||
T Consensus 5 ~~lP~~~D~R~~w~~~~~vt~VkdQg~CGS 34 (266)
T 3cbj_A 5 LKLPASFDAREQWPQCPTIKEIRDQGSCGS 34 (266)
T ss_dssp CCCCSCEEHHHHSTTCGGGGCCCBCCSSBC
T ss_pred CCCCccCcchhccCCCCcCCCCCCCCCcch
Confidence 479999999998 88999999999997
No 38
>3ois_A Cysteine protease; alpha and beta, hydrolase; HET: UDP; 1.65A {Xylella fastidiosa}
Probab=99.05 E-value=5.1e-12 Score=77.90 Aligned_cols=23 Identities=30% Similarity=0.346 Sum_probs=21.1
Q ss_pred CCCCCcccccccCCCCCCCcccCCCC
Q psy394 41 VKLPEEVDWRNKGAVTPIKDQGQCYK 66 (66)
Q Consensus 41 ~~~P~~~DWR~~g~Vt~Vk~Qg~CGS 66 (66)
..||++||||+++ ||||||+|||
T Consensus 55 ~~lP~s~DwR~~~---pVkdQG~CGS 77 (291)
T 3ois_A 55 AALPPKVDLTPPF---QVYDQGRIGS 77 (291)
T ss_dssp HTCCSEEECCCSS---CCCBCTTSSC
T ss_pred ccCCcceecccCC---CcccCCCCcc
Confidence 3699999999995 9999999997
No 39
>1deu_A Procathepsin X; cysteine protease, proregion, prosegment, HY; 1.70A {Homo sapiens} SCOP: d.3.1.1 PDB: 1ef7_A
Probab=98.93 E-value=2.8e-10 Score=69.86 Aligned_cols=26 Identities=31% Similarity=0.583 Sum_probs=23.9
Q ss_pred CCCCCccccccc---CCCCCCCccc---CCCC
Q psy394 41 VKLPEEVDWRNK---GAVTPIKDQG---QCYK 66 (66)
Q Consensus 41 ~~~P~~~DWR~~---g~Vt~Vk~Qg---~CGS 66 (66)
..||++||||++ |+|+|||||| .|||
T Consensus 34 ~~lP~~~DwR~~~~~~~vtpVkdQg~~~~CGS 65 (277)
T 1deu_A 34 ADLPKSWDWRNVDGVNYASITRNQHIPQYCGS 65 (277)
T ss_dssp GGSCSCEETTSBTTBCCCCCCCBTTCSSCCBC
T ss_pred ccCCCceecccCCCCCcCCccccCCCCCCCcc
Confidence 569999999998 6799999999 9997
No 40
>2wbf_X Serine-repeat antigen protein; SERA, malaria, vacuole, protease, cathepsin, hydrolase, glycoprotein, thiol protease; HET: DMS; 1.60A {Plasmodium falciparum} PDB: 3ch3_X 3ch2_X
Probab=98.64 E-value=7.6e-09 Score=62.77 Aligned_cols=22 Identities=18% Similarity=0.460 Sum_probs=19.8
Q ss_pred Cccccccc-CCCC--CCCcccCCCC
Q psy394 45 EEVDWRNK-GAVT--PIKDQGQCYK 66 (66)
Q Consensus 45 ~~~DWR~~-g~Vt--~Vk~Qg~CGS 66 (66)
.-.|||++ |+|+ ||||||.|||
T Consensus 9 ~~~dWR~~~~~~~it~VkdQg~CGS 33 (265)
T 2wbf_X 9 YCNRLKDENNCISNLQVEDQGNCDT 33 (265)
T ss_dssp CBCGGGCTTSTGGGSCCCBCTTSSC
T ss_pred HHHhhccCCCCCCCCCCcCCCCChh
Confidence 45899999 7988 9999999998
No 41
>2e01_A Cysteine proteinase 1; bleomycin hydrolase, thiol protease, C1 protease, hydrolase; 1.73A {Saccharomyces cerevisiae} PDB: 2e02_A 2e03_A 2dzy_A 1a6r_A 2e00_A 2dzz_A 3gcb_A 1gcb_A
Probab=97.93 E-value=1.9e-06 Score=56.20 Aligned_cols=25 Identities=12% Similarity=0.049 Sum_probs=10.8
Q ss_pred CCCCcccccccCCCCCCCcccCCCC
Q psy394 42 KLPEEVDWRNKGAVTPIKDQGQCYK 66 (66)
Q Consensus 42 ~~P~~~DWR~~g~Vt~Vk~Qg~CGS 66 (66)
..+..|+|+..++||||||||+|||
T Consensus 52 ~~~~~F~~~~~~~vtpVknQg~cGs 76 (457)
T 2e01_A 52 QDNRVFNTVVSTDSTPVTNQKSSGR 76 (457)
T ss_dssp HCCCCCSEECC------------CC
T ss_pred CCCCceEEEecCCccCcccCCCCcc
Confidence 4677899999999999999999997
No 42
>2cb5_A Protein (bleomycin hydrolase); aminopeptidase, cysteine protease, SELF- compartmentalizing, cylinase; 1.85A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cb5_A
Probab=97.80 E-value=8.7e-06 Score=53.13 Aligned_cols=25 Identities=12% Similarity=0.094 Sum_probs=22.7
Q ss_pred CCCCcccccccCCCCCCCcccCCCC
Q psy394 42 KLPEEVDWRNKGAVTPIKDQGQCYK 66 (66)
Q Consensus 42 ~~P~~~DWR~~g~Vt~Vk~Qg~CGS 66 (66)
..+..|+++...+||||||||+|||
T Consensus 47 ~~~~~F~~~~~~~~tpVknQg~cGs 71 (453)
T 2cb5_A 47 RAQHVFQHAVPQEGKPITNQKSSGR 71 (453)
T ss_dssp HCCCCCSEECSCCCSSCCBCCBSSC
T ss_pred cCCCceeeeeccCCCCcccCCCccc
Confidence 4677899999999999999999997
No 43
>3f75_P Toxopain-2, cathepsin L propeptide; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii}
Probab=97.17 E-value=0.00019 Score=38.55 Aligned_cols=19 Identities=26% Similarity=0.280 Sum_probs=16.5
Q ss_pred CCcCCCHHHHHHHHcCCCC
Q psy394 1 MSINWLHHEFVHMMNGFKR 19 (66)
Q Consensus 1 ~fsDlt~eEf~~~~~~~~~ 19 (66)
.|||||.+||.++|+|.+.
T Consensus 72 ~FaDLT~eEF~~~~lg~~~ 90 (106)
T 3f75_P 72 HFGDLSRDEFRRKYLGFKK 90 (106)
T ss_dssp TTTTCCHHHHHHHSCCBCC
T ss_pred ccccCCHHHHHHHHcCCCC
Confidence 4999999999999988654
No 44
>3pw3_A Aminopeptidase C; bleomycin, cysteine proteinase fold, structural genomics, JO center for structural genomics, JCSG; HET: MSE; 2.23A {Parabacteroides distasonis}
Probab=97.05 E-value=0.00019 Score=46.08 Aligned_cols=14 Identities=21% Similarity=0.392 Sum_probs=12.5
Q ss_pred CCCCCCCcccCCCC
Q psy394 53 GAVTPIKDQGQCYK 66 (66)
Q Consensus 53 g~Vt~Vk~Qg~CGS 66 (66)
-.||||||||+|||
T Consensus 20 ~~vtpVknQg~cGs 33 (383)
T 3pw3_A 20 NPITSVKNQNRAGT 33 (383)
T ss_dssp CCCCCCCBCCBSSC
T ss_pred cCCCCcccCCCCcH
Confidence 46899999999997
No 45
>1gxg_A Colicin E8 immunity protein; inhibitor, inhibitor protein of DNAse colicin E8, bacteriocin immunity, plasmid,; NMR {Escherichia coli} SCOP: a.28.2.1 PDB: 1gxh_A
Probab=69.76 E-value=3.1 Score=21.24 Aligned_cols=14 Identities=14% Similarity=0.349 Sum_probs=11.8
Q ss_pred CCcCCCHHHHHHHH
Q psy394 1 MSINWLHHEFVHMM 14 (66)
Q Consensus 1 ~fsDlt~eEf~~~~ 14 (66)
+++|+|.+||.+++
T Consensus 6 ~i~DyTe~Efi~lv 19 (85)
T 1gxg_A 6 SISDYTETEFKKII 19 (85)
T ss_dssp STTTSCHHHHHHHH
T ss_pred hhhhcCHHHHHHHH
Confidence 37899999998865
No 46
>2k0d_X IMME7, colicin-E7 immunity protein; toxin inhibitor; NMR {Escherichia coli}
Probab=67.10 E-value=2.8 Score=22.13 Aligned_cols=15 Identities=20% Similarity=0.472 Sum_probs=12.3
Q ss_pred CCcCCCHHHHHHHHc
Q psy394 1 MSINWLHHEFVHMMN 15 (66)
Q Consensus 1 ~fsDlt~eEf~~~~~ 15 (66)
+++|+|.+||..++.
T Consensus 13 ~isDYTE~EFi~lv~ 27 (101)
T 2k0d_X 13 SISDYTEAEFVQLLK 27 (101)
T ss_dssp SGGGCBHHHHHHHHH
T ss_pred hHHHhcHHHHHHHHH
Confidence 578999999988653
No 47
>1unk_A Colicin E7; immunity protein, dimeric structure, RNAse active site; 1.80A {Escherichia coli} SCOP: a.28.2.1 PDB: 1mz8_A 1ayi_A 2jaz_A 2jb0_A 2jbg_A 7cei_A 1znv_A 1cei_A 1ujz_A 2erh_A
Probab=65.96 E-value=3.5 Score=21.17 Aligned_cols=14 Identities=21% Similarity=0.487 Sum_probs=11.7
Q ss_pred CCcCCCHHHHHHHH
Q psy394 1 MSINWLHHEFVHMM 14 (66)
Q Consensus 1 ~fsDlt~eEf~~~~ 14 (66)
+++|+|.+||..++
T Consensus 6 ~i~DYTE~EFl~fv 19 (87)
T 1unk_A 6 SISDYTEAEFVQLL 19 (87)
T ss_dssp SGGGSCHHHHHHHH
T ss_pred chhhcCHHHHHHHH
Confidence 37899999998865
No 48
>1fr2_A Colicin E9 immunity protein; protein-protein complex, zinc containing enzyme, HNH-motif, immune system; 1.60A {Escherichia coli} SCOP: a.28.2.1 PDB: 1e0h_A 1emv_A 1imp_A 1imq_A 2k5x_A 2vln_A 2vlp_A 2vlq_A 2vlo_A 2gzf_A 2gzg_A 2gzi_A 2gyk_A 2gzj_A 2gze_A 1bxi_A 3gkl_C 3gjn_A
Probab=65.39 E-value=3.2 Score=21.20 Aligned_cols=14 Identities=14% Similarity=0.420 Sum_probs=11.7
Q ss_pred CCcCCCHHHHHHHH
Q psy394 1 MSINWLHHEFVHMM 14 (66)
Q Consensus 1 ~fsDlt~eEf~~~~ 14 (66)
+++|+|.+||..++
T Consensus 6 ~i~DyTe~Efi~lv 19 (86)
T 1fr2_A 6 SISDYTEAEFLQLV 19 (86)
T ss_dssp CGGGSBHHHHHHHH
T ss_pred hhhhcCHHHHHHHH
Confidence 37899999998865
No 49
>3u43_A Colicin-E2 immunity protein; protein-protein complex, DNAse, high affinity, protein bindi; 1.72A {Escherichia coli} PDB: 2no8_A 2wpt_A
Probab=59.97 E-value=4.5 Score=21.06 Aligned_cols=14 Identities=14% Similarity=0.373 Sum_probs=11.7
Q ss_pred CCcCCCHHHHHHHH
Q psy394 1 MSINWLHHEFVHMM 14 (66)
Q Consensus 1 ~fsDlt~eEf~~~~ 14 (66)
+++|+|.+||.+++
T Consensus 6 ~i~DyTe~Efi~lv 19 (94)
T 3u43_A 6 SISDYTEAEFLEFV 19 (94)
T ss_dssp SGGGSBHHHHHHHH
T ss_pred hhhhcCHHHHHHHH
Confidence 37899999998865
No 50
>1pby_C Quinohemoprotein amine dehydrogenase 9 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: a.137.9.1 PDB: 1jju_C*
Probab=52.05 E-value=5.3 Score=19.93 Aligned_cols=13 Identities=38% Similarity=0.662 Sum_probs=10.4
Q ss_pred CcccccccCCCCC
Q psy394 45 EEVDWRNKGAVTP 57 (66)
Q Consensus 45 ~~~DWR~~g~Vt~ 57 (66)
..-|||+.+.|-|
T Consensus 64 a~~DWR~L~~vFp 76 (79)
T 1pby_C 64 VMQDWRKLQSVFP 76 (79)
T ss_dssp HHHHGGGCCCSSC
T ss_pred hhHHHHHhcccCC
Confidence 3479999998876
No 51
>1jmx_G Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: a.137.9.1 PDB: 1jmz_G*
Probab=51.80 E-value=5.3 Score=19.93 Aligned_cols=13 Identities=54% Similarity=1.015 Sum_probs=10.3
Q ss_pred CcccccccCCCCC
Q psy394 45 EEVDWRNKGAVTP 57 (66)
Q Consensus 45 ~~~DWR~~g~Vt~ 57 (66)
..-|||+.+.|-|
T Consensus 64 a~~DWR~L~~vFp 76 (79)
T 1jmx_G 64 SAEDWRNLGTVFP 76 (79)
T ss_dssp HHHHGGGCCCCSC
T ss_pred hhHHHHHhcccCC
Confidence 3479999998876
No 52
>2xf7_A GP23.1; viral protein; 1.61A {Bacillus phage SPP1} PDB: 2xf5_A 2xf6_A
Probab=50.00 E-value=12 Score=16.94 Aligned_cols=12 Identities=17% Similarity=0.088 Sum_probs=10.2
Q ss_pred cCCCHHHHHHHH
Q psy394 3 INWLHHEFVHMM 14 (66)
Q Consensus 3 sDlt~eEf~~~~ 14 (66)
+|+|++|+-+++
T Consensus 31 G~iTQ~E~D~I~ 42 (51)
T 2xf7_A 31 GDLTQEEADKIM 42 (51)
T ss_dssp TSSCHHHHHHHH
T ss_pred CcccHHHHHHHH
Confidence 589999999875
No 53
>2h2m_A Protein MURR1, COMM domain-containing protein 1; all alpha-helical, metal transport; NMR {Homo sapiens}
Probab=44.82 E-value=6 Score=21.09 Aligned_cols=15 Identities=13% Similarity=0.031 Sum_probs=11.9
Q ss_pred CcCCCHHHHHHHHcC
Q psy394 2 SINWLHHEFVHMMNG 16 (66)
Q Consensus 2 fsDlt~eEf~~~~~~ 16 (66)
|.|+|.|||..++..
T Consensus 40 ypdvt~eef~~~~~K 54 (108)
T 2h2m_A 40 YPEVPPEEFRPFLAK 54 (108)
T ss_dssp CSSSCSSTHHHHHTT
T ss_pred cCCCCHHHHHHHHHH
Confidence 788889999887643
No 54
>1wy3_A Villin; structural protein; HET: NLE; 0.95A {Synthetic} PDB: 1wy4_A 1yri_A* 1yrf_A* 2f4k_A* 1vii_A 3trv_A* 3trw_A 3tjw_B* 3trv_B* 3try_A* 2ppz_A 2jm0_A* 3tjw_A* 3iur_B*
Probab=39.28 E-value=21 Score=15.03 Aligned_cols=10 Identities=10% Similarity=0.282 Sum_probs=7.7
Q ss_pred CCHHHHHHHH
Q psy394 5 WLHHEFVHMM 14 (66)
Q Consensus 5 lt~eEf~~~~ 14 (66)
|+.+||.+.+
T Consensus 1 Lsd~dF~~vF 10 (35)
T 1wy3_A 1 LSDEDFKAVF 10 (35)
T ss_dssp CCHHHHHHHH
T ss_pred CCHHHHHHHH
Confidence 5778888876
No 55
>1und_A Advillin, P92; actin binding, F-actin binding, cytoskeleton, headpiece subdomain; NMR {Homo sapiens} SCOP: a.14.1.1
Probab=36.74 E-value=24 Score=15.02 Aligned_cols=12 Identities=17% Similarity=0.387 Sum_probs=9.2
Q ss_pred CCCHHHHHHHHc
Q psy394 4 NWLHHEFVHMMN 15 (66)
Q Consensus 4 Dlt~eEf~~~~~ 15 (66)
-|+.+||.+.+.
T Consensus 2 yLsd~dF~~vFg 13 (37)
T 1und_A 2 YLSEQDFVSVFG 13 (37)
T ss_dssp CCCHHHHHHHHS
T ss_pred CCCHHHHHHHHC
Confidence 478899998763
No 56
>4aup_A Phospholipase A2 group XIII; hydrolase; 1.90A {Tuber borchii}
Probab=31.54 E-value=20 Score=19.40 Aligned_cols=15 Identities=27% Similarity=0.776 Sum_probs=11.7
Q ss_pred CCcccccccCCCCCC
Q psy394 44 PEEVDWRNKGAVTPI 58 (66)
Q Consensus 44 P~~~DWR~~g~Vt~V 58 (66)
|..+||..-||-.|-
T Consensus 30 ~~~~dW~sDGCS~sp 44 (123)
T 4aup_A 30 PGNLDWSDDGCSKSP 44 (123)
T ss_dssp STTSCCCCCTTTTSC
T ss_pred CCCCccCCCCccCCC
Confidence 459999999996543
No 57
>1b4u_A LIGA, LIGB, protocatechuate 4,5-dioxygenase; extradiol type dioxygenase, non-heme iron protein; HET: DHB; 2.20A {Sphingomonas paucimobilis} SCOP: a.88.1.1 PDB: 1bou_A
Probab=29.62 E-value=31 Score=19.13 Aligned_cols=15 Identities=20% Similarity=0.304 Sum_probs=12.0
Q ss_pred CcCCCHHHHHHHHcC
Q psy394 2 SINWLHHEFVHMMNG 16 (66)
Q Consensus 2 fsDlt~eEf~~~~~~ 16 (66)
+..||.+||.+++.+
T Consensus 110 mtg~s~eef~~mm~~ 124 (139)
T 1b4u_A 110 MTGMTQEEYAQMMID 124 (139)
T ss_dssp TTTSCHHHHHHHHHT
T ss_pred ccCCCHHHHHHHHHh
Confidence 467899999998754
No 58
>2k02_A Ferrous iron transport protein C; FEOC, iron-sulfur, metal-binding, metal binding protein; NMR {Klebsiella pneumoniae subsp}
Probab=28.25 E-value=12 Score=19.00 Aligned_cols=12 Identities=25% Similarity=0.285 Sum_probs=7.5
Q ss_pred cccccCCCCCCC
Q psy394 48 DWRNKGAVTPIK 59 (66)
Q Consensus 48 DWR~~g~Vt~Vk 59 (66)
.|-++|.|..++
T Consensus 39 ~Le~~G~l~R~~ 50 (87)
T 2k02_A 39 RMEAMGKVVRIS 50 (87)
T ss_dssp HHHTTCCSEEEE
T ss_pred HHHHCCCEEEEe
Confidence 355567777765
No 59
>2yxy_A Hypothetical conserved protein, GK0453; alpha and beta proteins (A+B) class, structural GENO unknown function, NPPSFA; 2.20A {Geobacillus kaustophilus}
Probab=26.95 E-value=30 Score=18.58 Aligned_cols=12 Identities=8% Similarity=-0.020 Sum_probs=9.5
Q ss_pred CcCCCHHHHHHH
Q psy394 2 SINWLHHEFVHM 13 (66)
Q Consensus 2 fsDlt~eEf~~~ 13 (66)
||+||.+|..+-
T Consensus 11 ySeMS~~EL~~E 22 (115)
T 2yxy_A 11 YSEMTKEELQQE 22 (115)
T ss_dssp GGGCCHHHHHHH
T ss_pred HhhcCHHHHHHH
Confidence 789999888654
No 60
>3pgb_A Putative uncharacterized protein; oxidoreductase, copper amine oxidase, CAO, topaquinone, TPQ; HET: TPQ NAG BMA MAN; 2.45A {Emericella nidulans}
Probab=22.17 E-value=44 Score=23.70 Aligned_cols=13 Identities=8% Similarity=0.010 Sum_probs=11.1
Q ss_pred CCcCCCHHHHHHH
Q psy394 1 MSINWLHHEFVHM 13 (66)
Q Consensus 1 ~fsDlt~eEf~~~ 13 (66)
.|+|||.+|.++-
T Consensus 67 vfadLs~~E~~aV 79 (797)
T 3pgb_A 67 VWYGLTDDETADV 79 (797)
T ss_dssp SSSCCCHHHHHHH
T ss_pred cccccCHHHHHHH
Confidence 5999999999774
No 61
>2qiy_C Ubiquitin carboxyl-terminal hydrolase 3; deubiquitylation, ubiquitin-specific processing proteases(UB NTF2, protein-protein recognition; 1.69A {Saccharomyces cerevisiae}
Probab=21.85 E-value=33 Score=15.56 Aligned_cols=12 Identities=33% Similarity=0.349 Sum_probs=9.2
Q ss_pred CCcCCCHHHHHH
Q psy394 1 MSINWLHHEFVH 12 (66)
Q Consensus 1 ~fsDlt~eEf~~ 12 (66)
||..-+.+||.+
T Consensus 23 lf~NT~e~EFs~ 34 (48)
T 2qiy_C 23 LFINTTEAEFAA 34 (48)
T ss_dssp EEESSCHHHHHH
T ss_pred eEeeCCHHHHHH
Confidence 466778899976
No 62
>3hi7_A Amiloride-sensitive amine oxidase; oxidoreductase, copper amine oxidase, topaquinone, TPQ, DIAM oxidase, DAO, human, glycoprotein, heparin-binding; HET: TPQ NAG BMA; 1.80A {Homo sapiens} PDB: 3hig_A* 3hii_A* 3k5t_A* 3mph_A*
Probab=21.75 E-value=37 Score=23.78 Aligned_cols=13 Identities=8% Similarity=0.092 Sum_probs=11.0
Q ss_pred CCcCCCHHHHHHH
Q psy394 1 MSINWLHHEFVHM 13 (66)
Q Consensus 1 ~fsDlt~eEf~~~ 13 (66)
.|+|||.+|.++-
T Consensus 12 vf~dLs~~E~~~V 24 (731)
T 3hi7_A 12 VFSDLSNQELKAV 24 (731)
T ss_dssp GGCCCCHHHHHHH
T ss_pred ccccCCHHHHHHH
Confidence 4899999999774
No 63
>1ik9_C DNA ligase IV; DNA END joining, double-strand break repair, V(D)J recombination, protein-protein complex, coiled coil; HET: DNA; 2.30A {Homo sapiens}
Probab=21.58 E-value=60 Score=13.60 Aligned_cols=15 Identities=13% Similarity=0.186 Sum_probs=11.3
Q ss_pred CcCCCHHHHHHHHcC
Q psy394 2 SINWLHHEFVHMMNG 16 (66)
Q Consensus 2 fsDlt~eEf~~~~~~ 16 (66)
+-|.|.+|++.++.+
T Consensus 19 ~rd~t~~eLk~il~~ 33 (37)
T 1ik9_C 19 FIDTDLNQLKEVFSG 33 (37)
T ss_dssp SSCCCHHHHHHHHHT
T ss_pred cCcCCHHHHHHHHHH
Confidence 347889999987754
No 64
>2f40_A Hypothetical protein PF1455; protein structure prediction, residual dipolar couplings, PY furious, simulated annealing, structural genomics; NMR {Pyrococcus furiosus} SCOP: i.11.1.1
Probab=21.39 E-value=17 Score=18.79 Aligned_cols=12 Identities=17% Similarity=0.030 Sum_probs=9.6
Q ss_pred CCcCCCHHHHHH
Q psy394 1 MSINWLHHEFVH 12 (66)
Q Consensus 1 ~fsDlt~eEf~~ 12 (66)
+|+|+|+||-..
T Consensus 14 kfg~It~EeA~~ 25 (96)
T 2f40_A 14 FTTNLTPEEAKI 25 (96)
T ss_dssp CCCSCTTTTTHH
T ss_pred ecCCCCHHHHHH
Confidence 589999998654
No 65
>1th5_A NIFU1; iron-sulfur cluster binding, structural genomics, program for RICE genome research, unknown function; NMR {Oryza sativa} SCOP: d.52.8.1
Probab=20.21 E-value=35 Score=16.68 Aligned_cols=12 Identities=8% Similarity=0.205 Sum_probs=9.1
Q ss_pred CCCCCcccCCCC
Q psy394 55 VTPIKDQGQCYK 66 (66)
Q Consensus 55 Vt~Vk~Qg~CGS 66 (66)
+--||-+|.|+|
T Consensus 37 ~V~v~l~GaC~g 48 (74)
T 1th5_A 37 IVKVRLTGPAAV 48 (74)
T ss_dssp EEEECCCSSSSS
T ss_pred EEEEEEecCCcc
Confidence 456888899975
Done!