RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy394
(66 letters)
>d1o0ea_ d.3.1.1 (A:) Ervatamin C {East indian rosebay (Ervatamia
coronaria) [TaxId: 52861]}
Length = 208
Score = 50.0 bits (118), Expect = 6e-10
Identities = 16/22 (72%), Positives = 20/22 (90%)
Query: 43 LPEEVDWRNKGAVTPIKDQGQC 64
LPE++DWR KGAVTP+K+QG C
Sbjct: 1 LPEQIDWRKKGAVTPVKNQGSC 22
>d1iwda_ d.3.1.1 (A:) Ervatamin B {Adam's apple (Ervatamia
coronaria) [TaxId: 52861]}
Length = 215
Score = 49.6 bits (117), Expect = 9e-10
Identities = 15/22 (68%), Positives = 17/22 (77%)
Query: 43 LPEEVDWRNKGAVTPIKDQGQC 64
LP VDWR+KGAV IK+Q QC
Sbjct: 1 LPSFVDWRSKGAVNSIKNQKQC 22
>d2h7ja1 d.3.1.1 (A:1-217) (Pro)cathepsin S {Human (Homo sapiens)
[TaxId: 9606]}
Length = 217
Score = 49.6 bits (117), Expect = 9e-10
Identities = 14/22 (63%), Positives = 16/22 (72%)
Query: 43 LPEEVDWRNKGAVTPIKDQGQC 64
LP+ VDWR KG VT +K QG C
Sbjct: 1 LPDSVDWREKGCVTEVKYQGSC 22
>d1ppoa_ d.3.1.1 (A:) Caricain (protease omega) {Papaya (Carica
papaya) [TaxId: 3649]}
Length = 216
Score = 49.6 bits (117), Expect = 1e-09
Identities = 16/22 (72%), Positives = 18/22 (81%)
Query: 43 LPEEVDWRNKGAVTPIKDQGQC 64
LPE VDWR KGAVTP++ QG C
Sbjct: 1 LPENVDWRKKGAVTPVRHQGSC 22
>d1cqda_ d.3.1.1 (A:) Proline-specific cysteine protease {Ginger
rhizome (Zingiber officinale) [TaxId: 94328]}
Length = 216
Score = 49.2 bits (116), Expect = 1e-09
Identities = 13/22 (59%), Positives = 17/22 (77%)
Query: 43 LPEEVDWRNKGAVTPIKDQGQC 64
LP+ +DWR GAV P+K+QG C
Sbjct: 1 LPDSIDWRENGAVVPVKNQGGC 22
>d1fh0a_ d.3.1.1 (A:) (Pro)cathepsin V {Human (Homo sapiens)
[TaxId: 9606]}
Length = 221
Score = 49.2 bits (116), Expect = 1e-09
Identities = 15/22 (68%), Positives = 18/22 (81%)
Query: 43 LPEEVDWRNKGAVTPIKDQGQC 64
LP+ VDWR KG VTP+K+Q QC
Sbjct: 1 LPKSVDWRKKGYVTPVKNQKQC 22
>d1s4va_ d.3.1.1 (A:) Vignain (bean endopeptidase) {Castor bean
(Ricinus communis) [TaxId: 3988]}
Length = 224
Score = 49.2 bits (116), Expect = 1e-09
Identities = 16/22 (72%), Positives = 18/22 (81%)
Query: 43 LPEEVDWRNKGAVTPIKDQGQC 64
+P VDWR KGAVT +KDQGQC
Sbjct: 2 VPASVDWRKKGAVTSVKDQGQC 23
>d1aeca_ d.3.1.1 (A:) Actinidin {Chinese gooseberry or kiwifruit
(Actinidia chinensis) [TaxId: 3625]}
Length = 218
Score = 49.2 bits (116), Expect = 1e-09
Identities = 14/22 (63%), Positives = 16/22 (72%)
Query: 43 LPEEVDWRNKGAVTPIKDQGQC 64
LP VDWR+ GAV IK QG+C
Sbjct: 1 LPSYVDWRSAGAVVDIKSQGEC 22
>d1khqa_ d.3.1.1 (A:) Papain {Papaya (Carica papaya) [TaxId:
3649]}
Length = 212
Score = 48.9 bits (115), Expect = 2e-09
Identities = 16/22 (72%), Positives = 19/22 (86%)
Query: 43 LPEEVDWRNKGAVTPIKDQGQC 64
+PE VDWR KGAVTP+K+QG C
Sbjct: 1 IPEYVDWRQKGAVTPVKNQGSC 22
>d1m6da_ d.3.1.1 (A:) Cathepsin F {Human (Homo sapiens) [TaxId:
9606]}
Length = 214
Score = 48.4 bits (114), Expect = 3e-09
Identities = 15/21 (71%), Positives = 17/21 (80%)
Query: 44 PEEVDWRNKGAVTPIKDQGQC 64
P E DWR+KGAVT +KDQG C
Sbjct: 2 PPEWDWRSKGAVTKVKDQGMC 22
>d1yala_ d.3.1.1 (A:) Chymopapain {Papaya (Carica papaya) [TaxId:
3649]}
Length = 218
Score = 48.0 bits (113), Expect = 3e-09
Identities = 14/21 (66%), Positives = 18/21 (85%)
Query: 44 PEEVDWRNKGAVTPIKDQGQC 64
P+ +DWR KGAVTP+K+QG C
Sbjct: 2 PQSIDWRAKGAVTPVKNQGAC 22
>d2r6na1 d.3.1.1 (A:1-215) (Pro)cathepsin K {Human (Homo sapiens)
[TaxId: 9606]}
Length = 215
Score = 48.1 bits (113), Expect = 4e-09
Identities = 14/21 (66%), Positives = 18/21 (85%)
Query: 44 PEEVDWRNKGAVTPIKDQGQC 64
P+ VD+R KG VTP+K+QGQC
Sbjct: 2 PDSVDYRKKGYVTPVKNQGQC 22
>d1me4a_ d.3.1.1 (A:) Cruzain {Trypanosoma cruzi [TaxId: 5693]}
Length = 215
Score = 47.3 bits (111), Expect = 6e-09
Identities = 15/21 (71%), Positives = 17/21 (80%)
Query: 44 PEEVDWRNKGAVTPIKDQGQC 64
P VDWR +GAVT +KDQGQC
Sbjct: 2 PAAVDWRARGAVTAVKDQGQC 22
>d2oula1 d.3.1.1 (A:-16-224) Falcipain 2 {Plasmodium falciparum
[TaxId: 5833]}
Length = 241
Score = 46.1 bits (108), Expect = 2e-08
Identities = 12/30 (40%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Query: 35 YIAPDNVKLPEEVDWRNKGAVTPIKDQGQC 64
Y +N DWR VTP+KDQ C
Sbjct: 11 YRGEENFD-HAAYDWRLHSGVTPVKDQKNC 39
>g8pch.1 d.3.1.1 (P:,A:) Cathepsin H {Pig (Sus scrofa) [TaxId:
9823]}
Length = 228
Score = 45.7 bits (107), Expect = 3e-08
Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Query: 40 NVKLPEEVDWRNKGA-VTPIKDQGQC 64
+ P +DWR KG V+P+K+QG C
Sbjct: 6 SATYPPSMDWRKKGNFVSPVKNQGSC 31
>d1gmya_ d.3.1.1 (A:) (Pro)cathepsin B {Human (Homo sapiens)
[TaxId: 9606]}
Length = 254
Score = 44.5 bits (104), Expect = 7e-08
Identities = 10/27 (37%), Positives = 12/27 (44%), Gaps = 4/27 (14%)
Query: 42 KLPEEVDWR----NKGAVTPIKDQGQC 64
KLP D R + I+DQG C
Sbjct: 1 KLPASFDAREQWPQCPTIKEIRDQGSC 27
>g1k3b.1 d.3.1.1 (B:,C:) Cathepsin C (dipeptidyl peptidase I),
catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 233
Score = 43.1 bits (100), Expect = 2e-07
Identities = 10/25 (40%), Positives = 14/25 (56%), Gaps = 3/25 (12%)
Query: 43 LPEEVDWRNKGA---VTPIKDQGQC 64
LP DWRN V+P+++Q C
Sbjct: 1 LPTSWDWRNVHGINFVSPVRNQASC 25
>d1xkga1 d.3.1.1 (A:4-305) Major mite fecal allergen der p 1
{House-dust mite (Dermatophagoides pteronyssinus)
[TaxId: 6956]}
Length = 302
Score = 39.3 bits (90), Expect = 5e-06
Identities = 17/59 (28%), Positives = 22/59 (37%)
Query: 7 HHEFVHMMNGFKRSTRLLGTERVEEGVTYIAPDNVKLPEEVDWRNKGAVTPIKDQGQCY 65
EF + + L T+ T N P E+D R VTPI+ QG C
Sbjct: 51 LDEFKNRFLMSAEAFEHLKTQFDLNAETNACSINGNAPAEIDLRQMRTVTPIRMQGGCG 109
>d1deua_ d.3.1.1 (A:) (Pro)cathepsin X {Human (Homo sapiens)
[TaxId: 9606]}
Length = 275
Score = 38.9 bits (89), Expect = 8e-06
Identities = 12/48 (25%), Positives = 19/48 (39%), Gaps = 5/48 (10%)
Query: 19 RSTRLLGTERVEEGVTYIAPDNVKLPEEVDWRNKGAV---TPIKDQGQ 63
LG Y++P + LP+ DWRN V + ++Q
Sbjct: 12 DGLAPLGRTTYPRPHEYLSPAD--LPKSWDWRNVDGVNYASITRNQHI 57
>d1cs8a_ d.3.1.1 (A:) (Pro)cathepsin L {Human (Homo sapiens) [TaxId:
9606]}
Length = 316
Score = 35.0 bits (79), Expect = 2e-04
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 7 HHEFVHMMN-GFKRSTRLLGTERVEEGVTYIAPDNVKLPEEVDWRNKGAVTPIKDQGQC 64
+ F M + F++ + +G + P + P VDWR KG VTP+K+QGQC
Sbjct: 60 MNAFGDMTSEEFRQVMNGFQNRKPRKGKVFQEPLFYEAPRSVDWREKGYVTPVKNQGQC 118
>d2ix0a1 b.40.4.5 (A:83-172) Exoribonuclease 2, RNB {Escherichia
coli [TaxId: 562]}
Length = 90
Score = 23.7 bits (51), Expect = 1.5
Identities = 9/45 (20%), Positives = 17/45 (37%)
Query: 21 TRLLGTERVEEGVTYIAPDNVKLPEEVDWRNKGAVTPIKDQGQCY 65
TR +G + + I PD+ L + + R + +G
Sbjct: 2 TRFVGKVQGKNDRLAIVPDHPLLKDAIPCRAARGLNHEFKEGDWA 46
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.319 0.136 0.431
Gapped
Lambda K H
0.267 0.0441 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 264,734
Number of extensions: 9077
Number of successful extensions: 44
Number of sequences better than 10.0: 1
Number of HSP's gapped: 40
Number of HSP's successfully gapped: 22
Length of query: 66
Length of database: 2,407,596
Length adjustment: 35
Effective length of query: 31
Effective length of database: 1,927,046
Effective search space: 59738426
Effective search space used: 59738426
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 47 (22.6 bits)