Query psy3942
Match_columns 160
No_of_seqs 135 out of 1047
Neff 7.1
Searched_HMMs 29240
Date Fri Aug 16 21:16:50 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3942.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/3942hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ado_A Lambda-crystallin; L-gu 100.0 1.7E-49 5.9E-54 330.5 18.0 160 1-160 24-195 (319)
2 3zwc_A Peroxisomal bifunctiona 100.0 9.6E-44 3.3E-48 322.7 16.8 155 2-160 335-500 (742)
3 3k6j_A Protein F01G10.3, confi 100.0 5.1E-37 1.7E-41 266.0 19.1 156 2-159 73-236 (460)
4 2dpo_A L-gulonate 3-dehydrogen 100.0 2.3E-34 7.7E-39 239.2 18.0 159 2-160 25-195 (319)
5 3mog_A Probable 3-hydroxybutyr 100.0 7.9E-34 2.7E-38 247.3 18.1 157 2-160 24-191 (483)
6 2wtb_A MFP2, fatty acid multif 100.0 1.2E-32 4E-37 249.7 19.6 156 2-159 331-497 (725)
7 1wdk_A Fatty oxidation complex 100.0 3.2E-32 1.1E-36 246.5 18.4 156 2-159 333-499 (715)
8 4e12_A Diketoreductase; oxidor 100.0 8.9E-32 3E-36 218.8 17.1 158 2-160 23-193 (283)
9 1zej_A HBD-9, 3-hydroxyacyl-CO 100.0 2.6E-31 9E-36 218.7 13.8 119 36-159 57-175 (293)
10 1zcj_A Peroxisomal bifunctiona 100.0 6.6E-31 2.3E-35 227.5 14.8 154 2-159 56-220 (463)
11 1f0y_A HCDH, L-3-hydroxyacyl-C 100.0 2.8E-29 9.7E-34 205.1 19.3 158 2-159 34-206 (302)
12 3tri_A Pyrroline-5-carboxylate 99.4 8.1E-13 2.8E-17 107.0 9.5 110 40-151 50-161 (280)
13 2ewd_A Lactate dehydrogenase,; 99.4 1.4E-13 4.7E-18 113.2 3.2 100 38-160 58-174 (317)
14 3gt0_A Pyrroline-5-carboxylate 99.2 2E-11 6.7E-16 96.6 7.1 110 40-152 50-160 (247)
15 3ggo_A Prephenate dehydrogenas 99.2 3.5E-10 1.2E-14 93.0 12.2 108 42-153 82-204 (314)
16 3d1l_A Putative NADP oxidoredu 99.0 8.4E-10 2.9E-14 87.6 8.5 109 40-154 55-168 (266)
17 3mog_A Probable 3-hydroxybutyr 99.0 8.9E-10 3E-14 95.8 7.8 68 87-160 323-390 (483)
18 3b1f_A Putative prephenate deh 98.8 2.9E-08 9.9E-13 79.6 8.9 110 42-153 55-180 (290)
19 3c24_A Putative oxidoreductase 98.7 2E-08 7E-13 80.6 6.5 109 41-153 56-183 (286)
20 2hjr_A Malate dehydrogenase; m 98.7 9E-09 3.1E-13 85.2 3.0 70 38-110 68-155 (328)
21 3qsg_A NAD-binding phosphogluc 98.6 9.5E-09 3.2E-13 84.0 2.7 109 40-157 70-187 (312)
22 2i6t_A Ubiquitin-conjugating e 98.6 2.5E-08 8.5E-13 81.9 5.0 91 39-149 64-170 (303)
23 2izz_A Pyrroline-5-carboxylate 98.6 1.1E-07 3.7E-12 77.9 8.4 110 40-151 71-184 (322)
24 1yqg_A Pyrroline-5-carboxylate 98.6 1.4E-07 4.9E-12 74.3 8.8 106 40-153 45-152 (263)
25 2f1k_A Prephenate dehydrogenas 98.6 5E-07 1.7E-11 71.8 10.5 108 43-154 48-167 (279)
26 1pzg_A LDH, lactate dehydrogen 98.5 3.5E-08 1.2E-12 81.7 3.4 91 39-149 64-177 (331)
27 2ahr_A Putative pyrroline carb 98.5 2.3E-07 8E-12 73.1 7.9 107 41-154 48-155 (259)
28 2g5c_A Prephenate dehydrogenas 98.5 5.1E-07 1.8E-11 71.9 9.3 107 43-153 51-172 (281)
29 1t2d_A LDH-P, L-lactate dehydr 98.5 5.8E-08 2E-12 80.1 3.2 70 38-110 58-150 (322)
30 2i76_A Hypothetical protein; N 98.4 1E-07 3.6E-12 76.3 3.9 101 43-153 48-153 (276)
31 2rcy_A Pyrroline carboxylate r 98.4 7.7E-07 2.6E-11 70.0 8.8 110 40-153 45-155 (262)
32 1jay_A Coenzyme F420H2:NADP+ o 98.4 2.6E-07 8.8E-12 70.5 5.6 107 41-154 53-181 (212)
33 2y0c_A BCEC, UDP-glucose dehyd 98.3 5.5E-07 1.9E-11 78.0 5.9 113 38-154 69-214 (478)
34 3ktd_A Prephenate dehydrogenas 98.3 6.1E-07 2.1E-11 74.8 5.9 108 41-152 52-185 (341)
35 2h78_A Hibadh, 3-hydroxyisobut 98.3 3.9E-07 1.3E-11 73.4 4.6 111 40-154 46-165 (302)
36 1a5z_A L-lactate dehydrogenase 98.3 4.2E-07 1.4E-11 74.6 4.7 95 40-159 56-168 (319)
37 2pv7_A T-protein [includes: ch 98.2 5.7E-06 1.9E-10 66.9 8.9 101 46-153 58-165 (298)
38 2ew2_A 2-dehydropantoate 2-red 98.2 1.2E-05 4.2E-10 64.1 9.8 103 50-155 71-184 (316)
39 3g0o_A 3-hydroxyisobutyrate de 98.1 9.9E-07 3.4E-11 71.4 3.3 107 44-157 55-173 (303)
40 1np3_A Ketol-acid reductoisome 98.1 3.5E-06 1.2E-10 69.6 6.5 102 41-148 61-174 (338)
41 3qha_A Putative oxidoreductase 98.1 1.7E-06 5.8E-11 69.9 4.3 112 40-157 58-175 (296)
42 2v6b_A L-LDH, L-lactate dehydr 98.1 2.9E-06 1E-10 69.2 5.3 88 40-149 56-159 (304)
43 3pef_A 6-phosphogluconate dehy 98.1 1.2E-06 4.1E-11 70.2 2.9 111 39-154 43-163 (287)
44 2uyy_A N-PAC protein; long-cha 98.1 5.8E-07 2E-11 72.8 0.6 112 40-154 73-192 (316)
45 1ur5_A Malate dehydrogenase; o 98.0 1.8E-06 6.2E-11 70.6 3.1 70 38-110 56-143 (309)
46 3pdu_A 3-hydroxyisobutyrate de 98.0 4.3E-07 1.5E-11 72.8 -1.6 110 40-157 44-165 (287)
47 2vns_A Metalloreductase steap3 98.0 4.9E-06 1.7E-10 64.3 4.0 107 40-154 71-194 (215)
48 1yb4_A Tartronic semialdehyde 98.0 4.4E-06 1.5E-10 66.6 3.7 108 40-154 45-164 (295)
49 3doj_A AT3G25530, dehydrogenas 98.0 2.8E-06 9.6E-11 69.1 2.5 110 40-157 64-185 (310)
50 3cky_A 2-hydroxymethyl glutara 97.9 5.2E-06 1.8E-10 66.5 3.8 107 40-153 47-165 (301)
51 2d4a_B Malate dehydrogenase; a 97.9 4.8E-06 1.6E-10 68.2 3.4 66 39-110 54-140 (308)
52 1vpd_A Tartronate semialdehyde 97.9 7.6E-06 2.6E-10 65.4 4.0 108 40-154 48-167 (299)
53 3dfu_A Uncharacterized protein 97.9 1.9E-05 6.5E-10 62.5 6.1 98 50-158 40-139 (232)
54 4huj_A Uncharacterized protein 97.8 3.5E-05 1.2E-09 59.5 6.5 103 44-154 73-198 (220)
55 4ezb_A Uncharacterized conserv 97.8 0.00012 4.1E-09 59.8 9.9 105 46-157 80-189 (317)
56 1mv8_A GMD, GDP-mannose 6-dehy 97.8 1.5E-05 5.2E-10 67.8 4.6 113 38-154 61-202 (436)
57 4dll_A 2-hydroxy-3-oxopropiona 97.8 1.5E-05 5.1E-10 65.1 4.3 107 40-154 74-191 (320)
58 3k96_A Glycerol-3-phosphate de 97.6 4.8E-05 1.6E-09 63.4 4.7 113 39-157 85-208 (356)
59 2q3e_A UDP-glucose 6-dehydroge 97.6 9.9E-06 3.4E-10 69.6 0.3 115 39-154 68-213 (467)
60 2raf_A Putative dinucleotide-b 97.5 0.00013 4.5E-09 56.0 6.1 99 50-154 54-176 (209)
61 3l6d_A Putative oxidoreductase 97.5 3.8E-05 1.3E-09 62.2 2.9 109 40-152 52-167 (306)
62 2gf2_A Hibadh, 3-hydroxyisobut 97.5 1.5E-05 5E-10 63.7 0.0 107 40-154 43-162 (296)
63 1x0v_A GPD-C, GPDH-C, glycerol 97.5 0.00039 1.3E-08 56.7 8.2 110 40-156 77-200 (354)
64 1i36_A Conserved hypothetical 97.4 0.00021 7.3E-09 56.0 5.7 103 45-157 48-153 (264)
65 1ldn_A L-lactate dehydrogenase 97.3 9.6E-05 3.3E-09 60.5 3.0 60 45-110 67-147 (316)
66 2w2k_A D-mandelate dehydrogena 97.3 7.1E-05 2.4E-09 62.2 2.1 95 40-136 207-311 (348)
67 3pid_A UDP-glucose 6-dehydroge 97.3 0.00046 1.6E-08 59.1 6.9 106 39-153 95-224 (432)
68 2cvz_A Dehydrogenase, 3-hydrox 97.3 0.00011 3.7E-09 58.2 2.4 103 47-154 49-157 (289)
69 1yj8_A Glycerol-3-phosphate de 97.2 0.00023 8E-09 59.0 4.4 111 40-157 90-218 (375)
70 3gg2_A Sugar dehydrogenase, UD 97.1 0.0011 3.7E-08 56.8 7.4 113 38-154 63-204 (450)
71 4e21_A 6-phosphogluconate dehy 97.1 0.00011 3.9E-09 61.2 0.6 101 40-146 65-174 (358)
72 1hyh_A L-hicdh, L-2-hydroxyiso 97.0 0.0011 3.8E-08 53.6 6.4 64 44-110 61-146 (309)
73 2gcg_A Glyoxylate reductase/hy 97.0 0.00022 7.4E-09 58.7 2.1 92 41-134 199-300 (330)
74 3c7a_A Octopine dehydrogenase; 97.0 0.00098 3.4E-08 55.6 5.7 54 40-95 68-122 (404)
75 2o3j_A UDP-glucose 6-dehydroge 96.9 0.0019 6.5E-08 55.7 6.8 113 39-154 72-219 (481)
76 2dbq_A Glyoxylate reductase; D 96.9 5.1E-05 1.7E-09 62.6 -3.1 93 41-135 193-294 (334)
77 3ba1_A HPPR, hydroxyphenylpyru 96.8 0.00019 6.6E-09 59.3 0.3 94 42-136 204-306 (333)
78 1ks9_A KPA reductase;, 2-dehyd 96.7 0.0028 9.6E-08 49.7 5.8 98 49-155 59-169 (291)
79 3hwr_A 2-dehydropantoate 2-red 96.6 0.0046 1.6E-07 50.1 6.8 110 40-157 74-192 (318)
80 2d0i_A Dehydrogenase; structur 96.6 0.00045 1.5E-08 57.0 0.6 93 41-136 189-291 (333)
81 1txg_A Glycerol-3-phosphate de 96.5 0.0032 1.1E-07 50.6 5.1 111 41-155 57-182 (335)
82 4a7p_A UDP-glucose dehydrogena 96.4 0.009 3.1E-07 51.2 7.8 112 39-154 70-208 (446)
83 2iz1_A 6-phosphogluconate dehy 96.4 0.0033 1.1E-07 54.0 4.9 104 40-148 52-164 (474)
84 2p4q_A 6-phosphogluconate dehy 96.3 0.00089 3E-08 58.1 1.0 104 40-148 58-170 (497)
85 3ldh_A Lactate dehydrogenase; 96.3 0.00095 3.2E-08 55.3 1.1 70 39-110 76-162 (330)
86 3tl2_A Malate dehydrogenase; c 96.2 0.0032 1.1E-07 51.6 3.7 71 38-110 64-151 (315)
87 3g79_A NDP-N-acetyl-D-galactos 96.2 0.0036 1.2E-07 54.2 4.1 111 38-154 87-227 (478)
88 1evy_A Glycerol-3-phosphate de 96.0 0.0093 3.2E-07 48.9 5.7 113 40-156 72-201 (366)
89 3p7m_A Malate dehydrogenase; p 96.0 0.0041 1.4E-07 51.1 3.3 70 40-111 61-147 (321)
90 1guz_A Malate dehydrogenase; o 95.9 0.019 6.3E-07 46.5 7.0 87 39-149 56-163 (310)
91 2zyd_A 6-phosphogluconate dehy 95.7 0.0047 1.6E-07 53.3 2.8 104 40-148 62-174 (480)
92 3fef_A Putative glucosidase LP 95.7 0.0071 2.4E-07 52.0 3.7 70 39-110 61-168 (450)
93 3ghy_A Ketopantoate reductase 95.5 0.045 1.5E-06 44.4 7.8 114 40-157 58-201 (335)
94 3gvi_A Malate dehydrogenase; N 95.5 0.0079 2.7E-07 49.5 3.3 71 39-111 62-149 (324)
95 3dtt_A NADP oxidoreductase; st 95.5 0.021 7.2E-07 44.4 5.5 104 44-153 81-212 (245)
96 1obb_A Maltase, alpha-glucosid 95.3 0.00054 1.9E-08 59.4 -4.6 24 39-62 63-86 (480)
97 2b0j_A 5,10-methenyltetrahydro 95.3 0.11 3.8E-06 42.6 9.2 111 39-152 127-241 (358)
98 2pgd_A 6-phosphogluconate dehy 95.3 0.017 5.9E-07 49.6 4.7 105 40-149 50-163 (482)
99 1lld_A L-lactate dehydrogenase 95.2 0.031 1E-06 44.8 5.7 69 40-110 63-148 (319)
100 3fi9_A Malate dehydrogenase; s 95.1 0.0084 2.9E-07 49.7 2.3 52 39-90 62-129 (343)
101 3fr7_A Putative ketol-acid red 94.8 0.036 1.2E-06 48.5 5.4 101 45-150 113-232 (525)
102 3ojo_A CAP5O; rossmann fold, c 94.8 0.016 5.5E-07 49.5 3.1 107 38-153 72-206 (431)
103 1up7_A 6-phospho-beta-glucosid 94.8 0.011 3.7E-07 50.3 2.0 69 39-110 59-163 (417)
104 1pgj_A 6PGDH, 6-PGDH, 6-phosph 94.5 0.041 1.4E-06 47.2 5.0 103 41-148 53-164 (478)
105 1u8x_X Maltose-6'-phosphate gl 94.2 0.041 1.4E-06 47.5 4.5 70 39-110 88-193 (472)
106 4gwg_A 6-phosphogluconate dehy 93.8 0.014 4.8E-07 50.5 0.7 105 40-149 52-165 (484)
107 2qyt_A 2-dehydropantoate 2-red 93.5 0.29 1E-05 38.5 7.9 109 41-154 72-193 (317)
108 1dlj_A UDP-glucose dehydrogena 93.3 0.32 1.1E-05 40.6 8.2 110 39-154 59-196 (402)
109 1s6y_A 6-phospho-beta-glucosid 93.3 0.1 3.4E-06 44.7 5.1 70 39-110 69-174 (450)
110 3hn2_A 2-dehydropantoate 2-red 92.7 1 3.5E-05 35.9 10.1 112 40-155 57-179 (312)
111 3i83_A 2-dehydropantoate 2-red 92.6 0.41 1.4E-05 38.4 7.7 114 40-156 58-182 (320)
112 4gbj_A 6-phosphogluconate dehy 91.8 0.099 3.4E-06 42.0 3.0 110 41-157 49-168 (297)
113 3u95_A Glycoside hydrolase, fa 90.3 0.22 7.7E-06 42.8 3.9 22 40-61 63-84 (477)
114 1bg6_A N-(1-D-carboxylethyl)-L 90.1 0.44 1.5E-05 38.2 5.3 45 42-88 64-108 (359)
115 3obb_A Probable 3-hydroxyisobu 89.7 0.26 8.8E-06 39.7 3.7 108 40-154 46-165 (300)
116 2yjz_A Metalloreductase steap4 88.6 0.078 2.7E-06 40.2 0.0 102 46-154 66-182 (201)
117 4aj2_A L-lactate dehydrogenase 87.2 0.22 7.5E-06 40.9 1.7 68 40-110 75-160 (331)
118 4fgw_A Glycerol-3-phosphate de 84.8 1.7 5.7E-05 36.6 5.9 52 39-92 103-154 (391)
119 1b8p_A Protein (malate dehydro 83.2 1.5 5E-05 35.5 4.8 50 39-88 69-134 (329)
120 1mld_A Malate dehydrogenase; o 82.7 2 6.8E-05 34.6 5.4 68 40-110 52-145 (314)
121 1smk_A Malate dehydrogenase, g 82.1 1.5 5.1E-05 35.5 4.5 64 44-110 67-153 (326)
122 3vtf_A UDP-glucose 6-dehydroge 80.6 3 0.0001 35.6 6.0 107 38-148 82-215 (444)
123 1oju_A MDH, malate dehydrogena 77.4 2.2 7.4E-05 34.2 4.0 68 40-110 57-142 (294)
124 1gdh_A D-glycerate dehydrogena 76.5 1.2 4.1E-05 36.1 2.2 80 41-121 190-275 (320)
125 2zqz_A L-LDH, L-lactate dehydr 75.6 5.9 0.0002 32.0 6.2 83 45-149 69-170 (326)
126 5mdh_A Malate dehydrogenase; o 75.0 4.2 0.00014 33.1 5.1 91 40-149 66-174 (333)
127 3gvx_A Glycerate dehydrogenase 74.4 1.3 4.5E-05 35.5 1.9 99 41-139 161-269 (290)
128 3nep_X Malate dehydrogenase; h 74.0 2.1 7.2E-05 34.7 3.0 69 41-111 58-143 (314)
129 3pqe_A L-LDH, L-lactate dehydr 70.6 5 0.00017 32.6 4.6 85 44-149 65-167 (326)
130 1ygy_A PGDH, D-3-phosphoglycer 70.6 0.86 2.9E-05 39.5 -0.1 103 46-149 189-308 (529)
131 1ez4_A Lactate dehydrogenase; 70.5 5.3 0.00018 32.2 4.7 62 45-110 65-145 (318)
132 1y6j_A L-lactate dehydrogenase 68.7 7.9 0.00027 31.0 5.4 62 45-110 67-147 (318)
133 2xxj_A L-LDH, L-lactate dehydr 67.6 5.9 0.0002 31.7 4.4 62 45-110 60-140 (310)
134 1o6z_A MDH, malate dehydrogena 67.5 7.6 0.00026 30.8 5.0 62 45-110 63-143 (303)
135 3d0o_A L-LDH 1, L-lactate dehy 64.6 9.5 0.00032 30.5 5.0 62 45-110 67-147 (317)
136 2i99_A MU-crystallin homolog; 61.8 2.7 9.1E-05 33.6 1.2 53 41-99 184-237 (312)
137 3vku_A L-LDH, L-lactate dehydr 60.2 6.5 0.00022 32.0 3.3 68 40-110 63-149 (326)
138 2cuk_A Glycerate dehydrogenase 59.6 3.4 0.00012 33.2 1.5 70 45-114 185-256 (311)
139 4dgs_A Dehydrogenase; structur 59.4 8.1 0.00028 31.6 3.8 83 41-123 210-297 (340)
140 4h7p_A Malate dehydrogenase; s 59.2 8.2 0.00028 31.6 3.8 50 40-89 87-152 (345)
141 2x0j_A Malate dehydrogenase; o 57.7 13 0.00044 29.8 4.6 69 40-110 57-142 (294)
142 4as2_A Phosphorylcholine phosp 53.6 4.6 0.00016 32.8 1.4 45 67-112 147-196 (327)
143 1wwk_A Phosphoglycerate dehydr 51.1 4 0.00014 32.7 0.6 73 41-114 185-260 (307)
144 1hye_A L-lactate/malate dehydr 50.3 16 0.00054 29.1 4.0 60 47-110 68-146 (313)
145 3ijp_A DHPR, dihydrodipicolina 49.8 21 0.00073 28.5 4.7 51 40-95 75-125 (288)
146 3hhp_A Malate dehydrogenase; M 49.3 20 0.00069 28.7 4.5 64 45-111 62-147 (312)
147 4f3y_A DHPR, dihydrodipicolina 49.0 13 0.00046 29.3 3.4 51 40-95 60-110 (272)
148 1f6k_A N-acetylneuraminate lya 47.5 46 0.0016 26.2 6.4 85 60-157 51-140 (293)
149 4g2n_A D-isomer specific 2-hyd 47.3 9.8 0.00033 31.1 2.4 89 40-129 214-311 (345)
150 2whl_A Beta-mannanase, baman5; 45.8 94 0.0032 23.8 7.9 85 55-154 116-219 (294)
151 2ojp_A DHDPS, dihydrodipicolin 44.8 11 0.00038 29.8 2.3 85 60-157 48-137 (292)
152 1qp8_A Formate dehydrogenase; 38.7 43 0.0015 26.5 4.9 94 44-137 165-273 (303)
153 3k5p_A D-3-phosphoglycerate de 38.4 79 0.0027 26.5 6.7 62 41-102 196-259 (416)
154 1j5p_A Aspartate dehydrogenase 38.3 39 0.0013 26.4 4.5 43 40-87 47-89 (253)
155 3llv_A Exopolyphosphatase-rela 38.1 76 0.0026 21.1 5.6 46 51-98 68-113 (141)
156 3cpr_A Dihydrodipicolinate syn 37.6 94 0.0032 24.5 6.8 86 59-157 62-152 (304)
157 4gxt_A A conserved functionall 36.3 18 0.00063 29.8 2.4 91 66-157 224-323 (385)
158 2wkj_A N-acetylneuraminate lya 36.2 85 0.0029 24.8 6.3 86 60-157 58-148 (303)
159 2yxg_A DHDPS, dihydrodipicolin 35.8 87 0.003 24.4 6.3 83 62-157 49-136 (289)
160 3qy9_A DHPR, dihydrodipicolina 35.5 60 0.002 25.0 5.2 48 40-95 42-89 (243)
161 1dih_A Dihydrodipicolinate red 35.1 36 0.0012 26.6 3.8 51 41-96 60-110 (273)
162 1wky_A Endo-beta-1,4-mannanase 34.8 1.5E+02 0.0051 24.8 7.9 87 55-154 124-227 (464)
163 2hmt_A YUAA protein; RCK, KTN, 34.7 56 0.0019 21.4 4.4 39 51-90 68-106 (144)
164 2ehh_A DHDPS, dihydrodipicolin 33.9 1.2E+02 0.004 23.7 6.8 84 61-157 48-136 (294)
165 3eb2_A Putative dihydrodipicol 33.1 25 0.00085 27.9 2.6 82 64-158 55-141 (300)
166 4h31_A Otcase, ornithine carba 32.5 69 0.0024 26.2 5.3 20 39-58 236-255 (358)
167 2vc6_A MOSA, dihydrodipicolina 32.5 86 0.0029 24.5 5.7 83 62-157 49-136 (292)
168 2j6i_A Formate dehydrogenase; 32.4 15 0.00052 30.1 1.3 62 41-102 209-272 (364)
169 3s5o_A 4-hydroxy-2-oxoglutarat 32.3 1.2E+02 0.0042 23.9 6.6 88 59-157 60-152 (307)
170 1z82_A Glycerol-3-phosphate de 32.3 38 0.0013 26.7 3.6 104 40-155 68-181 (335)
171 3flu_A DHDPS, dihydrodipicolin 31.2 1.1E+02 0.0039 23.9 6.3 81 64-157 58-143 (297)
172 1j4a_A D-LDH, D-lactate dehydr 30.8 15 0.00052 29.6 1.0 62 41-102 187-250 (333)
173 3upl_A Oxidoreductase; rossman 30.7 38 0.0013 28.8 3.5 93 40-152 92-189 (446)
174 1mx3_A CTBP1, C-terminal bindi 30.3 13 0.00045 30.3 0.5 62 41-102 211-274 (347)
175 3jtm_A Formate dehydrogenase, 30.2 21 0.00071 29.2 1.7 63 40-102 207-271 (351)
176 1xky_A Dihydrodipicolinate syn 30.0 1.1E+02 0.0037 24.1 6.0 85 60-157 59-148 (301)
177 1w3i_A EDA, 2-keto-3-deoxy glu 29.9 40 0.0014 26.6 3.3 83 60-157 46-133 (293)
178 2g76_A 3-PGDH, D-3-phosphoglyc 28.9 19 0.00066 29.1 1.3 58 45-102 211-270 (335)
179 1f06_A MESO-diaminopimelate D- 28.3 95 0.0033 24.4 5.4 53 41-97 46-98 (320)
180 2r8w_A AGR_C_1641P; APC7498, d 28.3 1E+02 0.0035 24.7 5.6 86 59-157 80-170 (332)
181 3na8_A Putative dihydrodipicol 27.9 90 0.0031 24.8 5.2 86 59-157 70-160 (315)
182 3oj0_A Glutr, glutamyl-tRNA re 27.8 27 0.00092 23.8 1.8 22 43-64 70-91 (144)
183 7mdh_A Protein (malate dehydro 27.7 1.1E+02 0.0038 25.2 5.7 88 41-148 96-202 (375)
184 1bqc_A Protein (beta-mannanase 27.5 2E+02 0.007 21.8 7.2 85 56-154 121-225 (302)
185 4dcm_A Ribosomal RNA large sub 27.2 97 0.0033 25.1 5.3 47 40-86 87-133 (375)
186 2ekl_A D-3-phosphoglycerate de 27.2 11 0.00037 30.2 -0.5 58 45-102 188-247 (313)
187 2rfg_A Dihydrodipicolinate syn 27.1 84 0.0029 24.7 4.8 83 62-157 49-136 (297)
188 3gg9_A D-3-phosphoglycerate de 26.9 23 0.00078 28.9 1.4 63 39-101 201-265 (352)
189 3m5v_A DHDPS, dihydrodipicolin 26.8 1.7E+02 0.006 22.8 6.7 81 64-157 58-144 (301)
190 3g17_A Similar to 2-dehydropan 26.7 37 0.0013 26.3 2.6 98 49-155 57-162 (294)
191 1o5k_A DHDPS, dihydrodipicolin 26.6 96 0.0033 24.5 5.1 84 61-157 60-148 (306)
192 1sc6_A PGDH, D-3-phosphoglycer 26.5 19 0.00064 30.0 0.8 62 41-102 185-248 (404)
193 3tak_A DHDPS, dihydrodipicolin 26.3 1.4E+02 0.0047 23.3 5.9 81 64-157 52-137 (291)
194 3qze_A DHDPS, dihydrodipicolin 26.1 1.6E+02 0.0053 23.4 6.3 81 64-157 74-159 (314)
195 3dcm_X AdoMet, uncharacterized 26.0 2.1E+02 0.007 21.4 6.8 66 34-100 78-154 (192)
196 3qfe_A Putative dihydrodipicol 25.4 71 0.0024 25.5 4.1 84 63-157 61-149 (318)
197 2nac_A NAD-dependent formate d 25.3 28 0.00096 28.9 1.7 62 41-102 235-298 (393)
198 2v9d_A YAGE; dihydrodipicolini 25.0 1.2E+02 0.0042 24.4 5.5 86 59-157 77-167 (343)
199 3daq_A DHDPS, dihydrodipicolin 24.7 1.4E+02 0.0049 23.2 5.8 81 64-157 53-138 (292)
200 3h5d_A DHDPS, dihydrodipicolin 24.2 50 0.0017 26.3 3.0 81 64-157 58-144 (311)
201 3ulk_A Ketol-acid reductoisome 23.6 80 0.0027 27.3 4.2 54 37-94 83-136 (491)
202 3si9_A DHDPS, dihydrodipicolin 23.4 1.5E+02 0.0052 23.5 5.7 81 64-157 73-158 (315)
203 1dxy_A D-2-hydroxyisocaproate 22.6 23 0.00079 28.5 0.6 64 46-110 190-255 (333)
204 3evt_A Phosphoglycerate dehydr 22.4 23 0.00079 28.5 0.6 71 44-114 182-255 (324)
205 3abf_A 4-oxalocrotonate tautom 22.3 92 0.0032 17.8 3.3 31 119-149 1-36 (64)
206 2nuw_A 2-keto-3-deoxygluconate 21.8 58 0.002 25.5 2.9 83 60-157 46-133 (288)
207 2g1u_A Hypothetical protein TM 21.4 1.9E+02 0.0066 19.5 5.4 44 51-95 82-125 (155)
208 2p0o_A Hypothetical protein DU 21.3 3.1E+02 0.01 22.6 7.2 60 83-151 114-176 (372)
209 1egz_A Endoglucanase Z, EGZ, C 20.8 1.2E+02 0.0042 23.0 4.6 83 56-153 126-219 (291)
210 3sgz_A Hydroxyacid oxidase 2; 20.4 2.3E+02 0.008 23.0 6.3 61 81-157 98-160 (352)
211 3l21_A DHDPS, dihydrodipicolin 20.2 52 0.0018 26.1 2.3 81 64-157 66-151 (304)
No 1
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=100.00 E-value=1.7e-49 Score=330.49 Aligned_cols=160 Identities=23% Similarity=0.328 Sum_probs=149.0
Q ss_pred ChhhCCcc-----------HHHHHHHHHHHHHHhcCCchhhhhhHHHHhcCceecCChhhhcCCCcEEEEeccCChHHHH
Q psy3942 1 VAAQAGNQ-----------EEGEKLIDSTLSRIKGSSKEEGEKLIDLTLSRIKGSSKVEDSVSQSDLVIEAIVENMDIKH 69 (160)
Q Consensus 1 ~~a~~G~~-----------~~a~~~i~~~l~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~al~~adlViEav~E~l~~K~ 69 (160)
+||++||+ ++++++|++.++++.+++........++.+++|++++|+++++++||||||||||++++|+
T Consensus 24 ~~a~~G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~~~~l~~a~~~ad~ViEav~E~l~iK~ 103 (319)
T 3ado_A 24 LFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAEAVEGVVHIQECVPENLDLKR 103 (319)
T ss_dssp HHHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHHHTTTEEEEEECCCSCHHHHH
T ss_pred HHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhcccccchHhHhccCcEEeeccccHHHHHH
Confidence 37889999 7889999999999888755443323678899999999998899999999999999999999
Q ss_pred HHHHHHhhhCCCCcEEeecCCCCCHHHHhcccCCCCcEEEeecCCCCCCCceEEEecCCCCCHHHHHHHHHHHHHcCCeE
Q psy3942 70 KLFTSVDKIAPASAILASNTSSLSITEIASVTNRKDKFVGLHFFNPVPMMKLLEVIRTNDTSDATYNAVTEWGKSIGKTT 149 (160)
Q Consensus 70 ~v~~~l~~~~~~~~iiasnTS~l~i~~la~~~~~p~r~ig~Hf~~P~~~~~lVEvv~~~~T~~~~~~~~~~~~~~lgk~p 149 (160)
++|++|+++|+|+||||||||+|++++|++.+.||+||+|+|||||||.|||||||+|+.|++++++++.+|++++||+|
T Consensus 104 ~lf~~l~~~~~~~aIlaSNTSsl~is~ia~~~~~p~r~ig~HffNP~~~m~LVEiv~g~~Ts~~~~~~~~~~~~~~gk~p 183 (319)
T 3ado_A 104 KIFAQLDSIVDDRVVLSSSSSCLLPSKLFTGLAHVKQCIVAHPVNPPYYIPLVELVPHPETSPATVDRTHALMRKIGQSP 183 (319)
T ss_dssp HHHHHHHTTCCSSSEEEECCSSCCHHHHHTTCTTGGGEEEEEECSSTTTCCEEEEEECTTCCHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHhhhcceeehhhhhccchhhhhhccCCCcEEEecCCCCccccchHHhcCCCCCcHHHHHHHHHHHHHhCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEe-cCcCcccC
Q psy3942 150 IVC-KDTPGFTP 160 (160)
Q Consensus 150 v~v-~d~pGfi~ 160 (160)
|++ +|+||||+
T Consensus 184 v~v~kd~pGFi~ 195 (319)
T 3ado_A 184 VRVLKEIDGFVL 195 (319)
T ss_dssp EECSSCCTTTTH
T ss_pred CCcCCCCCCEeH
Confidence 976 99999984
No 2
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=100.00 E-value=9.6e-44 Score=322.71 Aligned_cols=155 Identities=34% Similarity=0.535 Sum_probs=141.9
Q ss_pred hhhCCcc-----------HHHHHHHHHHHHHHhcCCchhhhhhHHHHhcCceecCChhhhcCCCcEEEEeccCChHHHHH
Q psy3942 2 AAQAGNQ-----------EEGEKLIDSTLSRIKGSSKEEGEKLIDLTLSRIKGSSKVEDSVSQSDLVIEAIVENMDIKHK 70 (160)
Q Consensus 2 ~a~~G~~-----------~~a~~~i~~~l~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~al~~adlViEav~E~l~~K~~ 70 (160)
||++|++ ++++++|.+.+++.+.+..... .+..+.++++++++ +++++||||||||+|++++|++
T Consensus 335 ~a~aG~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~---~~~~~~~~~~~~~~-~~l~~aDlVIEAV~E~l~iK~~ 410 (742)
T 3zwc_A 335 FARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNG---QASAKPKLRFSSST-KELSTVDLVVEAVFEDMNLKKK 410 (742)
T ss_dssp HHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHTTT---CCCCCCCEEEESCG-GGGGSCSEEEECCCSCHHHHHH
T ss_pred HHhCCCchhcccchHhhhhhHHHHHHHHHHHHHHhccccc---hhhhhhhhcccCcH-HHHhhCCEEEEeccccHHHHHH
Confidence 7889999 7788889888888766532221 22456899999999 5799999999999999999999
Q ss_pred HHHHHhhhCCCCcEEeecCCCCCHHHHhcccCCCCcEEEeecCCCCCCCceEEEecCCCCCHHHHHHHHHHHHHcCCeEE
Q psy3942 71 LFTSVDKIAPASAILASNTSSLSITEIASVTNRKDKFVGLHFFNPVPMMKLLEVIRTNDTSDATYNAVTEWGKSIGKTTI 150 (160)
Q Consensus 71 v~~~l~~~~~~~~iiasnTS~l~i~~la~~~~~p~r~ig~Hf~~P~~~~~lVEvv~~~~T~~~~~~~~~~~~~~lgk~pv 150 (160)
+|++|+++|+|+||||||||+|||++|++.+.||+||+|+|||||++.|||||||+|++|++++++++.+|++++||+||
T Consensus 411 vf~~le~~~~~~aIlASNTSsl~i~~ia~~~~~p~r~ig~HFfnP~~~m~LVEvi~g~~Ts~e~~~~~~~~~~~lgK~pV 490 (742)
T 3zwc_A 411 VFAELSALCKPGAFLCTNTSALNVDDIASSTDRPQLVIGTHFFSPAHVMRLLEVIPSRYSSPTTIATVMSLSKKIGKIGV 490 (742)
T ss_dssp HHHHHHHHSCTTCEEEECCSSSCHHHHHTTSSCGGGEEEEECCSSTTTCCEEEEEECSSCCHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHhhcCCCCceEEecCCcCChHHHHhhcCCccccccccccCCCCCCceEEEecCCCCCHHHHHHHHHHHHHhCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCcCcccC
Q psy3942 151 VCKDTPGFTP 160 (160)
Q Consensus 151 ~v~d~pGfi~ 160 (160)
+++|+||||.
T Consensus 491 ~vkd~pGFi~ 500 (742)
T 3zwc_A 491 VVGNCYGFVG 500 (742)
T ss_dssp ECCCSTTTTH
T ss_pred ccCCCCCccH
Confidence 9999999983
No 3
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=100.00 E-value=5.1e-37 Score=266.01 Aligned_cols=156 Identities=28% Similarity=0.485 Sum_probs=145.4
Q ss_pred hhhCCcc--------HHHHHHHHHHHHHHhcCCchhhhhhHHHHhcCceecCChhhhcCCCcEEEEeccCChHHHHHHHH
Q psy3942 2 AAQAGNQ--------EEGEKLIDSTLSRIKGSSKEEGEKLIDLTLSRIKGSSKVEDSVSQSDLVIEAIVENMDIKHKLFT 73 (160)
Q Consensus 2 ~a~~G~~--------~~a~~~i~~~l~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~al~~adlViEav~E~l~~K~~v~~ 73 (160)
++++|++ +++..+|++.++++++++.....+ .+..+++|++++|++ ++++||+|||||||++++|+++|+
T Consensus 73 la~aG~~V~l~D~~~e~a~~~i~~~l~~~~~~G~l~~~~-~~~~~~~i~~t~dl~-al~~aDlVIeAVpe~~~vk~~v~~ 150 (460)
T 3k6j_A 73 FGLAGIETFLVVRNEQRCKQELEVMYAREKSFKRLNDKR-IEKINANLKITSDFH-KLSNCDLIVESVIEDMKLKKELFA 150 (460)
T ss_dssp HHHTTCEEEEECSCHHHHHHHHHHHHHHHHHTTSCCHHH-HHHHHTTEEEESCGG-GCTTCSEEEECCCSCHHHHHHHHH
T ss_pred HHHCCCeEEEEECcHHHHHHHHHHHHHHHHHcCCCCHHH-HHHHhcceEEeCCHH-HHccCCEEEEcCCCCHHHHHHHHH
Confidence 5778888 677888999999988876544333 678899999999995 899999999999999999999999
Q ss_pred HHhhhCCCCcEEeecCCCCCHHHHhcccCCCCcEEEeecCCCCCCCceEEEecCCCCCHHHHHHHHHHHHHcCCeEEEec
Q psy3942 74 SVDKIAPASAILASNTSSLSITEIASVTNRKDKFVGLHFFNPVPMMKLLEVIRTNDTSDATYNAVTEWGKSIGKTTIVCK 153 (160)
Q Consensus 74 ~l~~~~~~~~iiasnTS~l~i~~la~~~~~p~r~ig~Hf~~P~~~~~lVEvv~~~~T~~~~~~~~~~~~~~lgk~pv~v~ 153 (160)
+|++.+++++||+||||++|+++|++.+.+|+|++|+|||||++.|+||||++|..|++++++++..|++.+||+||+++
T Consensus 151 ~l~~~~~~~aIlasnTSsl~i~~ia~~~~~p~r~iG~HffnPv~~m~LvEIv~g~~Ts~e~~~~~~~l~~~lGk~~v~v~ 230 (460)
T 3k6j_A 151 NLENICKSTCIFGTNTSSLDLNEISSVLRDPSNLVGIHFFNPANVIRLVEIIYGSHTSSQAIATAFQACESIKKLPVLVG 230 (460)
T ss_dssp HHHTTSCTTCEEEECCSSSCHHHHHTTSSSGGGEEEEECCSSTTTCCEEEEECCSSCCHHHHHHHHHHHHHTTCEEEEES
T ss_pred HHHhhCCCCCEEEecCCChhHHHHHHhccCCcceEEEEecchhhhCCEEEEEeCCCCCHHHHHHHHHHHHHhCCEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcCccc
Q psy3942 154 DTPGFT 159 (160)
Q Consensus 154 d~pGfi 159 (160)
|.||||
T Consensus 231 d~pGfi 236 (460)
T 3k6j_A 231 NCKSFV 236 (460)
T ss_dssp SCCHHH
T ss_pred cccHHH
Confidence 999997
No 4
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=100.00 E-value=2.3e-34 Score=239.19 Aligned_cols=159 Identities=23% Similarity=0.326 Sum_probs=142.3
Q ss_pred hhhCCcc-----------HHHHHHHHHHHHHHhcCCchhhhhhHHHHhcCceecCChhhhcCCCcEEEEeccCChHHHHH
Q psy3942 2 AAQAGNQ-----------EEGEKLIDSTLSRIKGSSKEEGEKLIDLTLSRIKGSSKVEDSVSQSDLVIEAIVENMDIKHK 70 (160)
Q Consensus 2 ~a~~G~~-----------~~a~~~i~~~l~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~al~~adlViEav~E~l~~K~~ 70 (160)
|+.+||+ +++.++|+++++.+++.+........+..+++|++++|+++++++||+||||+||++++|++
T Consensus 25 la~~G~~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~~~~~eav~~aDlVieavpe~~~~k~~ 104 (319)
T 2dpo_A 25 FASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAEAVEGVVHIQECVPENLDLKRK 104 (319)
T ss_dssp HHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHHHTTTEEEEEECCCSCHHHHHH
T ss_pred HHHCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEeCCHHHHHhcCCEEEEeccCCHHHHHH
Confidence 5778888 56777788888887765422211113567889999999987899999999999999999999
Q ss_pred HHHHHhhhCCCCcEEeecCCCCCHHHHhcccCCCCcEEEeecCCCCCCCceEEEecCCCCCHHHHHHHHHHHHHcCCeEE
Q psy3942 71 LFTSVDKIAPASAILASNTSSLSITEIASVTNRKDKFVGLHFFNPVPMMKLLEVIRTNDTSDATYNAVTEWGKSIGKTTI 150 (160)
Q Consensus 71 v~~~l~~~~~~~~iiasnTS~l~i~~la~~~~~p~r~ig~Hf~~P~~~~~lVEvv~~~~T~~~~~~~~~~~~~~lgk~pv 150 (160)
+|++|++.+++++||+||||++++++|++.+.+|+|++|+|||||++.+++|||++|+.|++++++++..|++.+||+|+
T Consensus 105 v~~~l~~~~~~~~Ii~s~tS~i~~~~la~~~~~~~r~ig~Hp~~P~~~~~lveiv~g~~t~~e~~~~~~~l~~~lGk~~v 184 (319)
T 2dpo_A 105 IFAQLDSIVDDRVVLSSSSSCLLPSKLFTGLAHVKQCIVAHPVNPPYYIPLVELVPHPETSPATVDRTHALMRKIGQSPV 184 (319)
T ss_dssp HHHHHHTTCCSSSEEEECCSSCCHHHHHTTCTTGGGEEEEEECSSTTTCCEEEEEECTTCCHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHhhCCCCeEEEEeCCChHHHHHHHhcCCCCCeEEeecCCchhhcceEEEeCCCCCCHHHHHHHHHHHHHcCCEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred Ee-cCcCcccC
Q psy3942 151 VC-KDTPGFTP 160 (160)
Q Consensus 151 ~v-~d~pGfi~ 160 (160)
++ +|.||||+
T Consensus 185 ~v~~~~~Gfi~ 195 (319)
T 2dpo_A 185 RVLKEIDGFVL 195 (319)
T ss_dssp ECSSCCTTTTH
T ss_pred EECCCcCCchH
Confidence 99 79999973
No 5
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=100.00 E-value=7.9e-34 Score=247.32 Aligned_cols=157 Identities=35% Similarity=0.557 Sum_probs=144.0
Q ss_pred hhhCCcc-----------HHHHHHHHHHHHHHhcCCchhhhhhHHHHhcCceecCChhhhcCCCcEEEEeccCChHHHHH
Q psy3942 2 AAQAGNQ-----------EEGEKLIDSTLSRIKGSSKEEGEKLIDLTLSRIKGSSKVEDSVSQSDLVIEAIVENMDIKHK 70 (160)
Q Consensus 2 ~a~~G~~-----------~~a~~~i~~~l~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~al~~adlViEav~E~l~~K~~ 70 (160)
++.+||+ +++.++|.+.++++++++.....+ .+..+++|+++++++ ++++||+||||+||++++|++
T Consensus 24 la~aG~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~-~~~~~~~i~~~~~~~-~~~~aDlVIeAVpe~~~vk~~ 101 (483)
T 3mog_A 24 AASHGHQVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAET-CERTLKRLIPVTDIH-ALAAADLVIEAASERLEVKKA 101 (483)
T ss_dssp HHHTTCCEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHH-HHHHHHTEEEECCGG-GGGGCSEEEECCCCCHHHHHH
T ss_pred HHHCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHH-HHHHHhceeEeCCHH-HhcCCCEEEEcCCCcHHHHHH
Confidence 5677888 667777888888887776544333 678899999999994 799999999999999999999
Q ss_pred HHHHHhhhCCCCcEEeecCCCCCHHHHhcccCCCCcEEEeecCCCCCCCceEEEecCCCCCHHHHHHHHHHHHHcCCeEE
Q psy3942 71 LFTSVDKIAPASAILASNTSSLSITEIASVTNRKDKFVGLHFFNPVPMMKLLEVIRTNDTSDATYNAVTEWGKSIGKTTI 150 (160)
Q Consensus 71 v~~~l~~~~~~~~iiasnTS~l~i~~la~~~~~p~r~ig~Hf~~P~~~~~lVEvv~~~~T~~~~~~~~~~~~~~lgk~pv 150 (160)
+|++|++.+++++||+||||++++++|++.+.+|+|++|+|||||++.++|+||++|..|++++++++..|++.+||+|+
T Consensus 102 v~~~l~~~~~~~~IlasntSti~i~~ia~~~~~p~~~ig~hf~~Pa~v~~Lvevv~g~~Ts~e~~~~~~~l~~~lGk~~v 181 (483)
T 3mog_A 102 LFAQLAEVCPPQTLLTTNTSSISITAIAAEIKNPERVAGLHFFNPAPVMKLVEVVSGLATAAEVVEQLCELTLSWGKQPV 181 (483)
T ss_dssp HHHHHHHHSCTTCEEEECCSSSCHHHHTTTSSSGGGEEEEEECSSTTTCCEEEEEECSSCCHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHhhccCcEEEecCCCCCHHHHHHHccCccceEEeeecChhhhCCeEEEecCCCCCHHHHHHHHHHHHHhCCEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCcCcccC
Q psy3942 151 VCKDTPGFTP 160 (160)
Q Consensus 151 ~v~d~pGfi~ 160 (160)
+++|+|||+.
T Consensus 182 ~v~d~~Gfi~ 191 (483)
T 3mog_A 182 RCHSTPGFIV 191 (483)
T ss_dssp EEESCTTTTH
T ss_pred EEeccCcchH
Confidence 9999999973
No 6
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=100.00 E-value=1.2e-32 Score=249.69 Aligned_cols=156 Identities=35% Similarity=0.566 Sum_probs=140.6
Q ss_pred hhhCCcc-----------HHHHHHHHHHHHHHhcCCchhhhhhHHHHhcCceecCChhhhcCCCcEEEEeccCChHHHHH
Q psy3942 2 AAQAGNQ-----------EEGEKLIDSTLSRIKGSSKEEGEKLIDLTLSRIKGSSKVEDSVSQSDLVIEAIVENMDIKHK 70 (160)
Q Consensus 2 ~a~~G~~-----------~~a~~~i~~~l~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~al~~adlViEav~E~l~~K~~ 70 (160)
++.+||+ ++++.+|+++++++++++.....+ .+..+++|++++|+ +++++||+|||||||++++|++
T Consensus 331 la~aG~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~-~~~~~~~i~~~~d~-~~~~~aDlVIeaVpe~~~vk~~ 408 (725)
T 2wtb_A 331 LILSNYPVILKEVNEKFLEAGIGRVKANLQSRVRKGSMSQEK-FEKTMSLLKGSLDY-ESFRDVDMVIEAVIENISLKQQ 408 (725)
T ss_dssp HHTTTCCEEEECSSHHHHHHHHHHHHHHHHHTTC----CTTH-HHHTTTSEEEESSS-GGGTTCSEEEECCCSCHHHHHH
T ss_pred HHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHH-HHHHhcceEEeCCH-HHHCCCCEEEEcCcCCHHHHHH
Confidence 5778888 556777888888887765443322 66788999999999 5899999999999999999999
Q ss_pred HHHHHhhhCCCCcEEeecCCCCCHHHHhcccCCCCcEEEeecCCCCCCCceEEEecCCCCCHHHHHHHHHHHHHcCCeEE
Q psy3942 71 LFTSVDKIAPASAILASNTSSLSITEIASVTNRKDKFVGLHFFNPVPMMKLLEVIRTNDTSDATYNAVTEWGKSIGKTTI 150 (160)
Q Consensus 71 v~~~l~~~~~~~~iiasnTS~l~i~~la~~~~~p~r~ig~Hf~~P~~~~~lVEvv~~~~T~~~~~~~~~~~~~~lgk~pv 150 (160)
+|++|++.+++++||+||||++++++|++.+.+|+|++|+|||||++.|++|||++|+.|++++++++..|++.+||+|+
T Consensus 409 v~~~l~~~~~~~~IlasntStl~i~~la~~~~~p~~~iG~hf~~P~~~~~lvevv~g~~t~~e~~~~~~~l~~~lGk~~v 488 (725)
T 2wtb_A 409 IFADLEKYCPQHCILASNTSTIDLNKIGERTKSQDRIVGAHFFSPAHIMPLLEIVRTNHTSAQVIVDLLDVGKKIKKTPV 488 (725)
T ss_dssp HHHHHHHHSCTTCEEEECCSSSCHHHHTTTCSCTTTEEEEEECSSTTTCCEEEEEECSSCCHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHhhCCCCcEEEeCCCCCCHHHHHHHhcCCCCEEEecCCCCcccCceEEEEECCCCCHHHHHHHHHHHHHhCCEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCcCccc
Q psy3942 151 VCKDTPGFT 159 (160)
Q Consensus 151 ~v~d~pGfi 159 (160)
+++|.|||+
T Consensus 489 ~v~d~~Gfi 497 (725)
T 2wtb_A 489 VVGNCTGFA 497 (725)
T ss_dssp EEESSTTTT
T ss_pred EECCCccHH
Confidence 999999997
No 7
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=100.00 E-value=3.2e-32 Score=246.54 Aligned_cols=156 Identities=37% Similarity=0.556 Sum_probs=143.1
Q ss_pred hhhCCcc-----------HHHHHHHHHHHHHHhcCCchhhhhhHHHHhcCceecCChhhhcCCCcEEEEeccCChHHHHH
Q psy3942 2 AAQAGNQ-----------EEGEKLIDSTLSRIKGSSKEEGEKLIDLTLSRIKGSSKVEDSVSQSDLVIEAIVENMDIKHK 70 (160)
Q Consensus 2 ~a~~G~~-----------~~a~~~i~~~l~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~al~~adlViEav~E~l~~K~~ 70 (160)
++.+||+ ++++.+|++.++++++++.....+ .+..+++|++++|+ +++++||+|||||+|++++|++
T Consensus 333 la~aG~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~-~~~~~~~i~~~~d~-~~~~~aDlVIeaV~e~~~vk~~ 410 (715)
T 1wdk_A 333 SASKGTPILMKDINEHGIEQGLAEAAKLLVGRVDKGRMTPAK-MAEVLNGIRPTLSY-GDFGNVDLVVEAVVENPKVKQA 410 (715)
T ss_dssp HHHTTCCEEEECSSHHHHHHHHHHHHHHHHHHHTTTSSCHHH-HHHHHHHEEEESSS-TTGGGCSEEEECCCSCHHHHHH
T ss_pred HHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHH-HHHHhcCeEEECCH-HHHCCCCEEEEcCCCCHHHHHH
Confidence 5678888 556778888898888776543322 56678899999999 6899999999999999999999
Q ss_pred HHHHHhhhCCCCcEEeecCCCCCHHHHhcccCCCCcEEEeecCCCCCCCceEEEecCCCCCHHHHHHHHHHHHHcCCeEE
Q psy3942 71 LFTSVDKIAPASAILASNTSSLSITEIASVTNRKDKFVGLHFFNPVPMMKLLEVIRTNDTSDATYNAVTEWGKSIGKTTI 150 (160)
Q Consensus 71 v~~~l~~~~~~~~iiasnTS~l~i~~la~~~~~p~r~ig~Hf~~P~~~~~lVEvv~~~~T~~~~~~~~~~~~~~lgk~pv 150 (160)
+|++|++.+++++||+||||++++++|++.+.+|+|++|+|||||++.|++|||++|+.|++++++++..|++.+||+|+
T Consensus 411 v~~~l~~~~~~~~IlasntStl~i~~la~~~~~~~~~ig~hf~~P~~~~~lvevv~g~~t~~e~~~~~~~l~~~lGk~~v 490 (715)
T 1wdk_A 411 VLAEVENHVREDAILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSDLAVATTVAYAKKMGKNPI 490 (715)
T ss_dssp HHHHHHTTSCTTCEEEECCSSSCHHHHGGGCSCGGGEEEEECCSSTTTCCEEEEEECSSCCHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHhhCCCCeEEEeCCCCCCHHHHHHHhcCccceEEEEccCCcccCceEEEEECCCCCHHHHHHHHHHHHHhCCEeE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCcCccc
Q psy3942 151 VCKDTPGFT 159 (160)
Q Consensus 151 ~v~d~pGfi 159 (160)
+++|.||||
T Consensus 491 ~v~d~~Gfi 499 (715)
T 1wdk_A 491 VVNDCPGFL 499 (715)
T ss_dssp EEESCTTTT
T ss_pred EEcCCCChh
Confidence 999999997
No 8
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=99.98 E-value=8.9e-32 Score=218.76 Aligned_cols=158 Identities=30% Similarity=0.457 Sum_probs=140.3
Q ss_pred hhhCCcc-----------HHHHHHHHHHHHHHhcCC-chhhhhhHHHHhcCceecCChhhhcCCCcEEEEeccCChHHHH
Q psy3942 2 AAQAGNQ-----------EEGEKLIDSTLSRIKGSS-KEEGEKLIDLTLSRIKGSSKVEDSVSQSDLVIEAIVENMDIKH 69 (160)
Q Consensus 2 ~a~~G~~-----------~~a~~~i~~~l~~~~~~~-~~~~~~~~~~~l~~i~~~~~~~~al~~adlViEav~E~l~~K~ 69 (160)
++.+|++ +++.+.|.+.++.+.+++ ..... ..+..++++++++++++++++||+||||+||+++.|+
T Consensus 23 la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~-~~~~~~~~i~~~~~~~~~~~~aDlVi~av~~~~~~~~ 101 (283)
T 4e12_A 23 TAFHGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADG-AAQKALGGIRYSDDLAQAVKDADLVIEAVPESLDLKR 101 (283)
T ss_dssp HHHTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTT-HHHHHHHHCEEESCHHHHTTTCSEEEECCCSCHHHHH
T ss_pred HHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHH-HHHHHHcCeEEeCCHHHHhccCCEEEEeccCcHHHHH
Confidence 5667887 556667777777765543 22222 2567788999999997789999999999999999999
Q ss_pred HHHHHHhhhCCCCcEEeecCCCCCHHHHhcccCCCCcEEEeecCCCCCCCceEEEecCCCCCHHHHHHHHHHHHHcCCeE
Q psy3942 70 KLFTSVDKIAPASAILASNTSSLSITEIASVTNRKDKFVGLHFFNPVPMMKLLEVIRTNDTSDATYNAVTEWGKSIGKTT 149 (160)
Q Consensus 70 ~v~~~l~~~~~~~~iiasnTS~l~i~~la~~~~~p~r~ig~Hf~~P~~~~~lVEvv~~~~T~~~~~~~~~~~~~~lgk~p 149 (160)
++|++++..+++++||+||||++++++|+..+.+|+|++|+|||||++.++++|++++..|++++++++..|++.+||.|
T Consensus 102 ~v~~~l~~~~~~~~il~s~tS~~~~~~la~~~~~~~~~ig~h~~~p~~~~~lvevv~~~~t~~~~~~~~~~l~~~~g~~~ 181 (283)
T 4e12_A 102 DIYTKLGELAPAKTIFATNSSTLLPSDLVGYTGRGDKFLALHFANHVWVNNTAEVMGTTKTDPEVYQQVVEFASAIGMVP 181 (283)
T ss_dssp HHHHHHHHHSCTTCEEEECCSSSCHHHHHHHHSCGGGEEEEEECSSTTTSCEEEEEECTTSCHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHhhCCCCcEEEECCCCCCHHHHHhhcCCCcceEEEccCCCcccCceEEEEeCCCCCHHHHHHHHHHHHHcCCEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEe-cCcCcccC
Q psy3942 150 IVC-KDTPGFTP 160 (160)
Q Consensus 150 v~v-~d~pGfi~ 160 (160)
+++ +|.||||.
T Consensus 182 v~v~~~~~g~i~ 193 (283)
T 4e12_A 182 IELKKEKAGYVL 193 (283)
T ss_dssp EECSSCCTTTTH
T ss_pred EEEecCCCCEEe
Confidence 999 89999973
No 9
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=99.97 E-value=2.6e-31 Score=218.66 Aligned_cols=119 Identities=31% Similarity=0.537 Sum_probs=113.5
Q ss_pred HHhcCceecCChhhhcCCCcEEEEeccCChHHHHHHHHHHhhhCCCCcEEeecCCCCCHHHHhcccCCCCcEEEeecCCC
Q psy3942 36 LTLSRIKGSSKVEDSVSQSDLVIEAIVENMDIKHKLFTSVDKIAPASAILASNTSSLSITEIASVTNRKDKFVGLHFFNP 115 (160)
Q Consensus 36 ~~l~~i~~~~~~~~al~~adlViEav~E~l~~K~~v~~~l~~~~~~~~iiasnTS~l~i~~la~~~~~p~r~ig~Hf~~P 115 (160)
+.+++++++++++ ++++||+||||+||++++|+.+|++|+.. |++||+||||+++++++++.+.+|+|++|+|||||
T Consensus 57 ~~~~~i~~~~~~~-~~~~aDlVieavpe~~~vk~~l~~~l~~~--~~~IlasntSti~~~~~a~~~~~~~r~~G~Hf~~P 133 (293)
T 1zej_A 57 ELLSKIEFTTTLE-KVKDCDIVMEAVFEDLNTKVEVLREVERL--TNAPLCSNTSVISVDDIAERLDSPSRFLGVHWMNP 133 (293)
T ss_dssp GGGGGEEEESSCT-TGGGCSEEEECCCSCHHHHHHHHHHHHTT--CCSCEEECCSSSCHHHHHTTSSCGGGEEEEEECSS
T ss_pred HHhCCeEEeCCHH-HHcCCCEEEEcCcCCHHHHHHHHHHHhcC--CCCEEEEECCCcCHHHHHHHhhcccceEeEEecCc
Confidence 4567899999996 59999999999999999999999999998 99999999999999999999999999999999999
Q ss_pred CCCCceEEEecCCCCCHHHHHHHHHHHHHcCCeEEEecCcCccc
Q psy3942 116 VPMMKLLEVIRTNDTSDATYNAVTEWGKSIGKTTIVCKDTPGFT 159 (160)
Q Consensus 116 ~~~~~lVEvv~~~~T~~~~~~~~~~~~~~lgk~pv~v~d~pGfi 159 (160)
++.+++|||++|+.|++++++++..|++.+||+|+.++|. ||
T Consensus 134 v~~~~lveiv~g~~t~~~~~~~~~~l~~~lGk~~v~v~d~--fi 175 (293)
T 1zej_A 134 PHVMPLVEIVISRFTDSKTVAFVEGFLRELGKEVVVCKGQ--SL 175 (293)
T ss_dssp TTTCCEEEEEECTTCCHHHHHHHHHHHHHTTCEEEEEESS--CH
T ss_pred cccCCEEEEECCCCCCHHHHHHHHHHHHHcCCeEEEeccc--cc
Confidence 9999999999999999999999999999999999999876 65
No 10
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=99.97 E-value=6.6e-31 Score=227.49 Aligned_cols=154 Identities=34% Similarity=0.537 Sum_probs=130.0
Q ss_pred hhhCCcc-----------HHHHHHHHHHHHHHhcCCchhhhhhHHHHhcCceecCChhhhcCCCcEEEEeccCChHHHHH
Q psy3942 2 AAQAGNQ-----------EEGEKLIDSTLSRIKGSSKEEGEKLIDLTLSRIKGSSKVEDSVSQSDLVIEAIVENMDIKHK 70 (160)
Q Consensus 2 ~a~~G~~-----------~~a~~~i~~~l~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~al~~adlViEav~E~l~~K~~ 70 (160)
++.+||+ +++++.+++.++..++++.....+ .+..+ .++++++ +++++||+||||+||++++|++
T Consensus 56 la~~G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~-~~~~~--~~i~~~~-~~~~~aDlVIeaVpe~~~~k~~ 131 (463)
T 1zcj_A 56 FARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQA-SAKPK--LRFSSST-KELSTVDLVVEAVFEDMNLKKK 131 (463)
T ss_dssp HHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCC-CCCCC--EEEESCG-GGGTTCSEEEECCCSCHHHHHH
T ss_pred HHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHH-HHHHH--hhhcCCH-HHHCCCCEEEEcCCCCHHHHHH
Confidence 5677887 455566666666554432211100 11122 3347788 5799999999999999999999
Q ss_pred HHHHHhhhCCCCcEEeecCCCCCHHHHhcccCCCCcEEEeecCCCCCCCceEEEecCCCCCHHHHHHHHHHHHHcCCeEE
Q psy3942 71 LFTSVDKIAPASAILASNTSSLSITEIASVTNRKDKFVGLHFFNPVPMMKLLEVIRTNDTSDATYNAVTEWGKSIGKTTI 150 (160)
Q Consensus 71 v~~~l~~~~~~~~iiasnTS~l~i~~la~~~~~p~r~ig~Hf~~P~~~~~lVEvv~~~~T~~~~~~~~~~~~~~lgk~pv 150 (160)
+|++|+..+++++||+||||++++++|++.+.+|+|++|+|||||++.+++|||++|+.|++++++++..|++.+||+|+
T Consensus 132 v~~~l~~~~~~~~ii~snTs~~~~~~la~~~~~~~~~ig~hf~~P~~~~~lvevv~g~~t~~e~~~~~~~l~~~lGk~~v 211 (463)
T 1zcj_A 132 VFAELSALCKPGAFLCTNTSALNVDDIASSTDRPQLVIGTHFFSPAHVMRLLEVIPSRYSSPTTIATVMSLSKKIGKIGV 211 (463)
T ss_dssp HHHHHHHHSCTTCEEEECCSSSCHHHHHTTSSCGGGEEEEEECSSTTTCCEEEEEECSSCCHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHhhCCCCeEEEeCCCCcCHHHHHHHhcCCcceEEeecCCCcccceeEEEeCCCCCCHHHHHHHHHHHHHhCCEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCcCccc
Q psy3942 151 VCKDTPGFT 159 (160)
Q Consensus 151 ~v~d~pGfi 159 (160)
+++|.|||+
T Consensus 212 ~v~~~~gfi 220 (463)
T 1zcj_A 212 VVGNCYGFV 220 (463)
T ss_dssp EBCCSTTTT
T ss_pred EECCCccHH
Confidence 999999997
No 11
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=99.97 E-value=2.8e-29 Score=205.09 Aligned_cols=158 Identities=46% Similarity=0.757 Sum_probs=138.6
Q ss_pred hhhCCcc-----------HHHHHHHHHHHHHHhcCCchhhh----hhHHHHhcCceecCChhhhcCCCcEEEEeccCChH
Q psy3942 2 AAQAGNQ-----------EEGEKLIDSTLSRIKGSSKEEGE----KLIDLTLSRIKGSSKVEDSVSQSDLVIEAIVENMD 66 (160)
Q Consensus 2 ~a~~G~~-----------~~a~~~i~~~l~~~~~~~~~~~~----~~~~~~l~~i~~~~~~~~al~~adlViEav~E~l~ 66 (160)
++.+||+ +++++.|.+.++.+++++..... ...+..+.++++++|+++++++||+||+|+||+++
T Consensus 34 la~~G~~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~aD~Vi~avp~~~~ 113 (302)
T 1f0y_A 34 AAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIATSTDAASVVHSTDLVVEAIVENLK 113 (302)
T ss_dssp HHHTTCEEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEEESCHHHHTTSCSEEEECCCSCHH
T ss_pred HHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhceEEecCHHHhhcCCCEEEEcCcCcHH
Confidence 5667887 45566677777777666533211 01345677899999997689999999999999999
Q ss_pred HHHHHHHHHhhhCCCCcEEeecCCCCCHHHHhcccCCCCcEEEeecCCCCCCCceEEEecCCCCCHHHHHHHHHHHHHcC
Q psy3942 67 IKHKLFTSVDKIAPASAILASNTSSLSITEIASVTNRKDKFVGLHFFNPVPMMKLLEVIRTNDTSDATYNAVTEWGKSIG 146 (160)
Q Consensus 67 ~K~~v~~~l~~~~~~~~iiasnTS~l~i~~la~~~~~p~r~ig~Hf~~P~~~~~lVEvv~~~~T~~~~~~~~~~~~~~lg 146 (160)
+|+++|++|...+++++||+||||+++++++++.+.+|+|++|+||++|++.++++||+.|+.|++++++.+..|++.+|
T Consensus 114 ~~~~v~~~l~~~~~~~~iv~s~ts~i~~~~l~~~~~~~~~~~g~h~~~P~~~~~~~~i~~g~~~~~e~~~~~~~l~~~~G 193 (302)
T 1f0y_A 114 VKNELFKRLDKFAAEHTIFASNTSSLQITSIANATTRQDRFAGLHFFNPVPVMKLVEVIKTPMTSQKTFESLVDFSKALG 193 (302)
T ss_dssp HHHHHHHHHTTTSCTTCEEEECCSSSCHHHHHTTSSCGGGEEEEEECSSTTTCCEEEEECCTTCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhhCCCCeEEEECCCCCCHHHHHHhcCCcccEEEEecCCCcccCceEEEeCCCCCCHHHHHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEEEecCcCccc
Q psy3942 147 KTTIVCKDTPGFT 159 (160)
Q Consensus 147 k~pv~v~d~pGfi 159 (160)
+.|++++|.|||+
T Consensus 194 ~~~v~~~~~~g~i 206 (302)
T 1f0y_A 194 KHPVSCKDTPGFI 206 (302)
T ss_dssp CEEEEECSCTTTT
T ss_pred CceEEecCccccc
Confidence 9999999999987
No 12
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=99.41 E-value=8.1e-13 Score=107.04 Aligned_cols=110 Identities=10% Similarity=0.115 Sum_probs=97.9
Q ss_pred CceecCChhhhcCCCcEEEEeccCChHHHHHHHHHHhhh-CCCCcEEeecCCCCCHHHHhcccCCCCcEEEeecCCCCCC
Q psy3942 40 RIKGSSKVEDSVSQSDLVIEAIVENMDIKHKLFTSVDKI-APASAILASNTSSLSITEIASVTNRKDKFVGLHFFNPVPM 118 (160)
Q Consensus 40 ~i~~~~~~~~al~~adlViEav~E~l~~K~~v~~~l~~~-~~~~~iiasnTS~l~i~~la~~~~~p~r~ig~Hf~~P~~~ 118 (160)
.++++++..++++++|+||.|++- ..+++++++|... ++++++|.|++++++++.|...+.++.+++++||.+|...
T Consensus 50 gi~~~~~~~~~~~~aDvVilav~p--~~~~~vl~~l~~~~l~~~~iiiS~~agi~~~~l~~~l~~~~~vvr~mPn~p~~v 127 (280)
T 3tri_A 50 GVHTTQDNRQGALNADVVVLAVKP--HQIKMVCEELKDILSETKILVISLAVGVTTPLIEKWLGKASRIVRAMPNTPSSV 127 (280)
T ss_dssp CCEEESCHHHHHSSCSEEEECSCG--GGHHHHHHHHHHHHHTTTCEEEECCTTCCHHHHHHHHTCCSSEEEEECCGGGGG
T ss_pred CCEEeCChHHHHhcCCeEEEEeCH--HHHHHHHHHHHhhccCCCeEEEEecCCCCHHHHHHHcCCCCeEEEEecCChHHh
Confidence 567777776789999999999964 6789999999998 8999999999999999999999988899999999999988
Q ss_pred CceEE-EecCCCCCHHHHHHHHHHHHHcCCeEEE
Q psy3942 119 MKLLE-VIRTNDTSDATYNAVTEWGKSIGKTTIV 151 (160)
Q Consensus 119 ~~lVE-vv~~~~T~~~~~~~~~~~~~~lgk~pv~ 151 (160)
...++ ++.++.++++.++.+..+++.+|+.+++
T Consensus 128 ~~g~~~l~~~~~~~~~~~~~v~~l~~~iG~~~~v 161 (280)
T 3tri_A 128 RAGATGLFANETVDKDQKNLAESIMRAVGLVIWV 161 (280)
T ss_dssp TCEEEEEECCTTSCHHHHHHHHHHHGGGEEEEEC
T ss_pred cCccEEEEeCCCCCHHHHHHHHHHHHHCCCeEEE
Confidence 88776 5678999999999999999999995443
No 13
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=99.37 E-value=1.4e-13 Score=113.19 Aligned_cols=100 Identities=20% Similarity=0.260 Sum_probs=89.2
Q ss_pred hcCceecCChhhhcCCCcEEEEec--------------cCChHHHHHHHHHHhhhCCCCcEE--eecCCCCCHHHHhccc
Q psy3942 38 LSRIKGSSKVEDSVSQSDLVIEAI--------------VENMDIKHKLFTSVDKIAPASAIL--ASNTSSLSITEIASVT 101 (160)
Q Consensus 38 l~~i~~~~~~~~al~~adlViEav--------------~E~l~~K~~v~~~l~~~~~~~~ii--asnTS~l~i~~la~~~ 101 (160)
..+++.++++ +++++||+||+|+ +|+.++|++++++|++.++ ++++ +||++++....++..+
T Consensus 58 ~~~i~~t~d~-~a~~~aDiVi~avg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~~~~-~~iii~~sNp~~~~~~~~~~~~ 135 (317)
T 2ewd_A 58 TSKVIGTDDY-ADISGSDVVIITASIPGRPKDDRSELLFGNARILDSVAEGVKKYCP-NAFVICITNPLDVMVSHFQKVS 135 (317)
T ss_dssp CCCEEEESCG-GGGTTCSEEEECCCCSSCCSSCGGGGHHHHHHHHHHHHHHHHHHCT-TSEEEECCSSHHHHHHHHHHHH
T ss_pred CcEEEECCCH-HHhCCCCEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHHHHCC-CcEEEEeCChHHHHHHHHHHhh
Confidence 3578888899 6899999999999 8999999999999999985 8877 9999999999998888
Q ss_pred CC-CCcEEEeecCCCCCCCceEEEecCCCCCHHHHHHHHHHHHHcCCeEEEecCcCcccC
Q psy3942 102 NR-KDKFVGLHFFNPVPMMKLLEVIRTNDTSDATYNAVTEWGKSIGKTTIVCKDTPGFTP 160 (160)
Q Consensus 102 ~~-p~r~ig~Hf~~P~~~~~lVEvv~~~~T~~~~~~~~~~~~~~lgk~pv~v~d~pGfi~ 160 (160)
++ |+|++|+ .|+.++......+++.+|+.| +|.+|||+
T Consensus 136 ~~~~~rviG~------------------~t~ld~~r~~~~la~~lg~~~---~~v~~~v~ 174 (317)
T 2ewd_A 136 GLPHNKVCGM------------------AGVLDSSRFRTFIAQHFGVNA---SDVSANVI 174 (317)
T ss_dssp CCCGGGEEES------------------CHHHHHHHHHHHHHHHHTSCG---GGEECCEE
T ss_pred CCCHHHEEec------------------cCcHHHHHHHHHHHHHhCcCh---hhceEEEE
Confidence 87 7899986 689999999999999999974 89999973
No 14
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=99.21 E-value=2e-11 Score=96.55 Aligned_cols=110 Identities=16% Similarity=0.223 Sum_probs=95.8
Q ss_pred CceecCChhhhcCCCcEEEEeccCChHHHHHHHHHHhhhCCCCcEEeecCCCCCHHHHhcccCCCCcEEEeecCCCCCCC
Q psy3942 40 RIKGSSKVEDSVSQSDLVIEAIVENMDIKHKLFTSVDKIAPASAILASNTSSLSITEIASVTNRKDKFVGLHFFNPVPMM 119 (160)
Q Consensus 40 ~i~~~~~~~~al~~adlViEav~E~l~~K~~v~~~l~~~~~~~~iiasnTS~l~i~~la~~~~~p~r~ig~Hf~~P~~~~ 119 (160)
.+..+++..++++++|+||.|++ ....+++++++...+++++++.|.++++++..+...+..+.+++++|+.+|....
T Consensus 50 g~~~~~~~~e~~~~aDvVilav~--~~~~~~v~~~l~~~l~~~~~vvs~~~gi~~~~l~~~~~~~~~~v~~~p~~p~~~~ 127 (247)
T 3gt0_A 50 GLTTTTDNNEVAKNADILILSIK--PDLYASIINEIKEIIKNDAIIVTIAAGKSIESTENAFNKKVKVVRVMPNTPALVG 127 (247)
T ss_dssp CCEECSCHHHHHHHCSEEEECSC--TTTHHHHC---CCSSCTTCEEEECSCCSCHHHHHHHHCSCCEEEEEECCGGGGGT
T ss_pred CCEEeCChHHHHHhCCEEEEEeC--HHHHHHHHHHHHhhcCCCCEEEEecCCCCHHHHHHHhCCCCcEEEEeCChHHHHc
Confidence 46677788778899999999994 6678899999999999999999999999999999888878899999999999888
Q ss_pred c-eEEEecCCCCCHHHHHHHHHHHHHcCCeEEEe
Q psy3942 120 K-LLEVIRTNDTSDATYNAVTEWGKSIGKTTIVC 152 (160)
Q Consensus 120 ~-lVEvv~~~~T~~~~~~~~~~~~~~lgk~pv~v 152 (160)
+ .+.++.++.++++.++.+..+++.+|+ ++.+
T Consensus 128 ~g~~~~~~~~~~~~~~~~~~~~l~~~~G~-~~~~ 160 (247)
T 3gt0_A 128 EGMSALCPNEMVTEKDLEDVLNIFNSFGQ-TEIV 160 (247)
T ss_dssp CEEEEEEECTTCCHHHHHHHHHHHGGGEE-EEEC
T ss_pred CceEEEEeCCCCCHHHHHHHHHHHHhCCC-EEEe
Confidence 7 899999999999999999999999999 5555
No 15
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=99.15 E-value=3.5e-10 Score=93.05 Aligned_cols=108 Identities=14% Similarity=0.159 Sum_probs=90.7
Q ss_pred eecCChhh-hcCCCcEEEEeccCChHHHHHHHHHHhhhCCCCcEEeecCCCCC--HHHHhcccCCCCcEEEeecCCCCC-
Q psy3942 42 KGSSKVED-SVSQSDLVIEAIVENMDIKHKLFTSVDKIAPASAILASNTSSLS--ITEIASVTNRKDKFVGLHFFNPVP- 117 (160)
Q Consensus 42 ~~~~~~~~-al~~adlViEav~E~l~~K~~v~~~l~~~~~~~~iiasnTS~l~--i~~la~~~~~p~r~ig~Hf~~P~~- 117 (160)
..++++++ ++++||+||.|+|.+. ..++++++...++++++|.+.+|.-+ +..+...+ |.|++|.|+++++.
T Consensus 82 ~~~~~~~~~~~~~aDvVilavp~~~--~~~vl~~l~~~l~~~~iv~d~~Svk~~~~~~~~~~l--~~~~v~~hPm~G~e~ 157 (314)
T 3ggo_A 82 EGTTSIAKVEDFSPDFVMLSSPVRT--FREIAKKLSYILSEDATVTDQGSVKGKLVYDLENIL--GKRFVGGHPIAGTEK 157 (314)
T ss_dssp EEESCTTGGGGGCCSEEEECSCGGG--HHHHHHHHHHHSCTTCEEEECCSCCTHHHHHHHHHH--GGGEECEEECCCCCC
T ss_pred hhcCCHHHHhhccCCEEEEeCCHHH--HHHHHHHHhhccCCCcEEEECCCCcHHHHHHHHHhc--CCCEEecCcccCCcc
Confidence 45677876 7899999999999875 57899999999999999998877643 55666554 34999999999764
Q ss_pred -----------CCceEEEecCCCCCHHHHHHHHHHHHHcCCeEEEec
Q psy3942 118 -----------MMKLLEVIRTNDTSDATYNAVTEWGKSIGKTTIVCK 153 (160)
Q Consensus 118 -----------~~~lVEvv~~~~T~~~~~~~~~~~~~~lgk~pv~v~ 153 (160)
..+++.+++++.++++.++++..+++.+|+.++.+.
T Consensus 158 sG~~~A~~~Lf~g~~~il~~~~~~~~~~~~~v~~l~~~~G~~v~~~~ 204 (314)
T 3ggo_A 158 SGVEYSLDNLYEGKKVILTPTKKTDKKRLKLVKRVWEDVGGVVEYMS 204 (314)
T ss_dssp CSGGGCCTTTTTTCEEEECCCTTSCHHHHHHHHHHHHHTTCEEEECC
T ss_pred cchhhhhhhhhcCCEEEEEeCCCCCHHHHHHHHHHHHHcCCEEEEcC
Confidence 356899999999999999999999999999999873
No 16
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=99.02 E-value=8.4e-10 Score=87.56 Aligned_cols=109 Identities=6% Similarity=0.073 Sum_probs=87.9
Q ss_pred CceecCChhhhcCCCcEEEEeccCChHHHHHHHHHHhhhCCCCcEEeecCCCCCHHHHhcccCCCCcEEEeecCCCC---
Q psy3942 40 RIKGSSKVEDSVSQSDLVIEAIVENMDIKHKLFTSVDKIAPASAILASNTSSLSITEIASVTNRKDKFVGLHFFNPV--- 116 (160)
Q Consensus 40 ~i~~~~~~~~al~~adlViEav~E~l~~K~~v~~~l~~~~~~~~iiasnTS~l~i~~la~~~~~p~r~ig~Hf~~P~--- 116 (160)
.+..+++++++++++|+||.|+|.+ .+ ++++.++...++++++|.+++++++.+.++..+..+. ..|+++|.
T Consensus 55 g~~~~~~~~~~~~~~Dvvi~av~~~-~~-~~v~~~l~~~~~~~~ivv~~s~~~~~~~l~~~~~~~~---~~~~~~~~~g~ 129 (266)
T 3d1l_A 55 EAEYTTDLAEVNPYAKLYIVSLKDS-AF-AELLQGIVEGKREEALMVHTAGSIPMNVWEGHVPHYG---VFYPMQTFSKQ 129 (266)
T ss_dssp TCEEESCGGGSCSCCSEEEECCCHH-HH-HHHHHHHHTTCCTTCEEEECCTTSCGGGSTTTCSSEE---EEEECCCC---
T ss_pred CCceeCCHHHHhcCCCEEEEecCHH-HH-HHHHHHHHhhcCCCcEEEECCCCCchHHHHHHHHhcc---CcCCceecCCC
Confidence 4667788877789999999999998 44 8899999999999999999999999998877665432 36888762
Q ss_pred --CCCceEEEecCCCCCHHHHHHHHHHHHHcCCeEEEecC
Q psy3942 117 --PMMKLLEVIRTNDTSDATYNAVTEWGKSIGKTTIVCKD 154 (160)
Q Consensus 117 --~~~~lVEvv~~~~T~~~~~~~~~~~~~~lgk~pv~v~d 154 (160)
..++-++++. ..++++..+.+..+++.+|+.|+.+.+
T Consensus 130 ~~~~~~~~~~~v-~~~~~~~~~~~~~l~~~~g~~~~~~~~ 168 (266)
T 3d1l_A 130 REVDFKEIPFFI-EASSTEDAAFLKAIASTLSNRVYDADS 168 (266)
T ss_dssp CCCCCTTCCEEE-EESSHHHHHHHHHHHHTTCSCEEECCH
T ss_pred chhhcCCCeEEE-ecCCHHHHHHHHHHHHhcCCcEEEeCH
Confidence 2344455444 467899999999999999999999864
No 17
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=98.98 E-value=8.9e-10 Score=95.79 Aligned_cols=68 Identities=15% Similarity=0.155 Sum_probs=63.1
Q ss_pred ecCCCCCHHHHhcccCCCCcEEEeecCCCCCCCceEEEecCCCCCHHHHHHHHHHHHHcCCeEEEecCcCcccC
Q psy3942 87 SNTSSLSITEIASVTNRKDKFVGLHFFNPVPMMKLLEVIRTNDTSDATYNAVTEWGKSIGKTTIVCKDTPGFTP 160 (160)
Q Consensus 87 snTS~l~i~~la~~~~~p~r~ig~Hf~~P~~~~~lVEvv~~~~T~~~~~~~~~~~~~~lgk~pv~v~d~pGfi~ 160 (160)
..|++.+.++. ...+|+|++|+|+++ +++|||++++.|++++++++.+|++++||+|++++|.||||.
T Consensus 323 ~~~~~~~~~~~--~~~~~~~~v~~~~~~----~~~vev~~~~~t~~~~~~~~~~~~~~~gk~~~~~~d~~g~i~ 390 (483)
T 3mog_A 323 IETQGETAQAL--AIRLARPVVVIDKMA----GKVVTIAAAAVNPDSATRKAIYYLQQQGKTVLQIADYPGMLI 390 (483)
T ss_dssp EECSSSCHHHH--HHHHTSCEEEEECCS----SSEEEEEECTTSCHHHHHHHHHHHHTTTCEEEECCCCTTTTH
T ss_pred cccCCcchHHH--hhccccceeeeeccc----cceEEEecCCCCCHHHHHHHHHHHHHcCCceeeecccccHHH
Confidence 36888999988 457899999999999 899999999999999999999999999999999999999983
No 18
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=98.75 E-value=2.9e-08 Score=79.56 Aligned_cols=110 Identities=12% Similarity=0.097 Sum_probs=87.4
Q ss_pred eecCChhhhcCCCcEEEEeccCChHHHHHHHHHHhhh-CCCCcEEeecCCCC--CHHHHhcccCC-CCcEEEeecC----
Q psy3942 42 KGSSKVEDSVSQSDLVIEAIVENMDIKHKLFTSVDKI-APASAILASNTSSL--SITEIASVTNR-KDKFVGLHFF---- 113 (160)
Q Consensus 42 ~~~~~~~~al~~adlViEav~E~l~~K~~v~~~l~~~-~~~~~iiasnTS~l--~i~~la~~~~~-p~r~ig~Hf~---- 113 (160)
..+++++++++++|+||.|+|...- ++++.++... ++++++|.+.++.. ....+...+.. ..|+++.|++
T Consensus 55 ~~~~~~~~~~~~aDvVilavp~~~~--~~v~~~l~~~~l~~~~ivi~~~~~~~~~~~~l~~~l~~~~~~~v~~~P~~g~~ 132 (290)
T 3b1f_A 55 EATADFKVFAALADVIILAVPIKKT--IDFIKILADLDLKEDVIITDAGSTKYEIVRAAEYYLKDKPVQFVGSHPMAGSH 132 (290)
T ss_dssp EEESCTTTTGGGCSEEEECSCHHHH--HHHHHHHHTSCCCTTCEEECCCSCHHHHHHHHHHHHTTSSCEEEEEEEC----
T ss_pred cccCCHHHhhcCCCEEEEcCCHHHH--HHHHHHHHhcCCCCCCEEEECCCCchHHHHHHHHhccccCCEEEEeCCcCCCC
Confidence 4566776678999999999998765 7899999888 88999888543332 23566666654 6799999998
Q ss_pred --CCCC------CCceEEEecCCCCCHHHHHHHHHHHHHcCCeEEEec
Q psy3942 114 --NPVP------MMKLLEVIRTNDTSDATYNAVTEWGKSIGKTTIVCK 153 (160)
Q Consensus 114 --~P~~------~~~lVEvv~~~~T~~~~~~~~~~~~~~lgk~pv~v~ 153 (160)
.|.+ ..+.+.+.++..++++.++.+..+++.+|+.++.+.
T Consensus 133 ~~g~~~a~~~l~~g~~~~~~~~~~~~~~~~~~v~~l~~~~G~~~~~~~ 180 (290)
T 3b1f_A 133 KSGAVAANVNLFENAYYIFSPSCLTKPNTIPALQDLLSGLHARYVEID 180 (290)
T ss_dssp -CCTTSCCTTTTTTSEEEEEECTTCCTTHHHHHHHHTGGGCCEEEECC
T ss_pred cchHHHhhHHHhCCCeEEEecCCCCCHHHHHHHHHHHHHcCCEEEEcC
Confidence 6654 346788999999999999999999999999888764
No 19
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=98.71 E-value=2e-08 Score=80.60 Aligned_cols=109 Identities=11% Similarity=0.071 Sum_probs=86.2
Q ss_pred ceecCChhhhcCCCcEEEEeccCChHHHHHHHHHHhhhCCCCcEEeecCCCCCHHHHhcccCCCCcEEEeecCCCCC---
Q psy3942 41 IKGSSKVEDSVSQSDLVIEAIVENMDIKHKLFTSVDKIAPASAILASNTSSLSITEIASVTNRKDKFVGLHFFNPVP--- 117 (160)
Q Consensus 41 i~~~~~~~~al~~adlViEav~E~l~~K~~v~~~l~~~~~~~~iiasnTS~l~i~~la~~~~~p~r~ig~Hf~~P~~--- 117 (160)
+..+ +..++++++|+||.|+|.+. -++++.++...++++++|.+.+++.+++.+.. .....++++.|+..|..
T Consensus 56 ~~~~-~~~~~~~~aDvVi~av~~~~--~~~v~~~l~~~l~~~~ivv~~s~~~~~~~l~~-~~~~~~~v~~~P~~~~~~~~ 131 (286)
T 3c24_A 56 IPLT-DGDGWIDEADVVVLALPDNI--IEKVAEDIVPRVRPGTIVLILDAAAPYAGVMP-ERADITYFIGHPCHPPLFND 131 (286)
T ss_dssp CCCC-CSSGGGGTCSEEEECSCHHH--HHHHHHHHGGGSCTTCEEEESCSHHHHHTCSC-CCTTSEEEEEEECCSCSSCC
T ss_pred CCcC-CHHHHhcCCCEEEEcCCchH--HHHHHHHHHHhCCCCCEEEECCCCchhHHHHh-hhCCCeEEecCCCCcccccc
Confidence 4443 45467899999999999877 57899999999999999999888888888875 33335899999999876
Q ss_pred -----CCc--------eEEEecCCCCCHHHHHHHHHHHHHcCC---eEEEec
Q psy3942 118 -----MMK--------LLEVIRTNDTSDATYNAVTEWGKSIGK---TTIVCK 153 (160)
Q Consensus 118 -----~~~--------lVEvv~~~~T~~~~~~~~~~~~~~lgk---~pv~v~ 153 (160)
... ...++.+..++++.++.+..+++.+|+ .++.+.
T Consensus 132 ~~~~~~~~g~l~~~~~~~~i~~~~~~~~~~~~~v~~l~~~~G~~~~~~~~v~ 183 (286)
T 3c24_A 132 ETDPAARTDYHGGIAKQAIVCALMQGPEEHYAIGADICETMWSPVTRTHRVT 183 (286)
T ss_dssp CCSHHHHTCSSSSSSCEEEEEEEEESCTHHHHHHHHHHHHHTCSEEEEEECC
T ss_pred ccchhhccCcccccccceeeeeccCCCHHHHHHHHHHHHHhcCCcceEEEeC
Confidence 222 244555556889999999999999999 788774
No 20
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=98.65 E-value=9e-09 Score=85.17 Aligned_cols=70 Identities=20% Similarity=0.259 Sum_probs=58.5
Q ss_pred hcCceecCChhhhcCCCcEEEEec--cC------------ChHHHHHHHHHHhhhCCCCcEE--eecCCCCCHHHHhccc
Q psy3942 38 LSRIKGSSKVEDSVSQSDLVIEAI--VE------------NMDIKHKLFTSVDKIAPASAIL--ASNTSSLSITEIASVT 101 (160)
Q Consensus 38 l~~i~~~~~~~~al~~adlViEav--~E------------~l~~K~~v~~~l~~~~~~~~ii--asnTS~l~i~~la~~~ 101 (160)
..+|+.++|+ +++++||+||+++ |+ |+++|+++++++++.| |++++ +||++++ ++.++...
T Consensus 68 ~~~i~~t~d~-~al~~aD~VI~avg~p~k~g~tr~dl~~~n~~i~~~i~~~i~~~~-p~a~viv~tNP~~~-~t~~~~~~ 144 (328)
T 2hjr_A 68 PAKIFGENNY-EYLQNSDVVIITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYC-PNAFVICITNPLDA-MVYYFKEK 144 (328)
T ss_dssp CCCEEEESCG-GGGTTCSEEEECCSCCCCTTCCSGGGHHHHHHHHHHHHHHHHHHC-TTCEEEECCSSHHH-HHHHHHHH
T ss_pred CCEEEECCCH-HHHCCCCEEEEcCCCCCCCCCchhhHHhhhHHHHHHHHHHHHHHC-CCeEEEEecCchHH-HHHHHHHh
Confidence 4578998999 6899999999998 65 7789999999999998 67765 8998886 46776554
Q ss_pred C--CCCcEEEe
Q psy3942 102 N--RKDKFVGL 110 (160)
Q Consensus 102 ~--~p~r~ig~ 110 (160)
. +|+||+|+
T Consensus 145 ~~~~~~rviG~ 155 (328)
T 2hjr_A 145 SGIPANKVCGM 155 (328)
T ss_dssp HCCCGGGEEES
T ss_pred cCCChhhEEEe
Confidence 4 68999998
No 21
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=98.64 E-value=9.5e-09 Score=84.04 Aligned_cols=109 Identities=12% Similarity=0.111 Sum_probs=80.7
Q ss_pred CceecCChhhhcCCCcEEEEeccCChHHHHHHHHHHhhhCCCCcEEeecCCCCCHHH--HhcccCCCCcEEEeecCCCCC
Q psy3942 40 RIKGSSKVEDSVSQSDLVIEAIVENMDIKHKLFTSVDKIAPASAILASNTSSLSITE--IASVTNRKDKFVGLHFFNPVP 117 (160)
Q Consensus 40 ~i~~~~~~~~al~~adlViEav~E~l~~K~~v~~~l~~~~~~~~iiasnTS~l~i~~--la~~~~~p~r~ig~Hf~~P~~ 117 (160)
.+..+++++++++++|+||.|+|.+...+ ++.++...++++++|...||..+.+. ++..+ +++++|+||+++|-
T Consensus 70 g~~~~~~~~e~~~~aDvVi~~vp~~~~~~--~~~~l~~~l~~~~ivvd~st~~~~~~~~~~~~~--~~~~~g~~~vd~pv 145 (312)
T 3qsg_A 70 GVSCKASVAEVAGECDVIFSLVTAQAALE--VAQQAGPHLCEGALYADFTSCSPAVKRAIGDVI--SRHRPSAQYAAVAV 145 (312)
T ss_dssp TCEECSCHHHHHHHCSEEEECSCTTTHHH--HHHHHGGGCCTTCEEEECCCCCHHHHHHHHHHH--HHHCTTCEEEEEEE
T ss_pred CCEEeCCHHHHHhcCCEEEEecCchhHHH--HHHhhHhhcCCCCEEEEcCCCCHHHHHHHHHHH--HhhcCCCeEEeccc
Confidence 46777888778899999999999998775 67899999999999887776665543 33332 23333555554332
Q ss_pred CC-------ceEEEecCCCCCHHHHHHHHHHHHHcCCeEEEecCcCc
Q psy3942 118 MM-------KLLEVIRTNDTSDATYNAVTEWGKSIGKTTIVCKDTPG 157 (160)
Q Consensus 118 ~~-------~lVEvv~~~~T~~~~~~~~~~~~~~lgk~pv~v~d~pG 157 (160)
.. .++.++.|+.+ +++..+++.+|+.++.+.+.+|
T Consensus 146 ~g~~~~~~g~l~i~vgg~~~-----~~~~~ll~~~g~~~~~~g~~~g 187 (312)
T 3qsg_A 146 MSAVKPHGHRVPLVVDGDGA-----RRFQAAFTLYGCRIEVLDGEVG 187 (312)
T ss_dssp CSCSTTTGGGSEEEEESTTH-----HHHHHHHHTTTCEEEECCSSTT
T ss_pred cCCchhhcCCEEEEecCChH-----HHHHHHHHHhCCCeEEcCCCCC
Confidence 22 68888888765 7888999999999998876565
No 22
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=98.63 E-value=2.5e-08 Score=81.86 Aligned_cols=91 Identities=13% Similarity=0.181 Sum_probs=65.3
Q ss_pred cCceecCChhhhcCCCcEEEEec-------------cCChHHHHHHHHHHhhhCCCCcEE--eecCCCCCHHHHhcccCC
Q psy3942 39 SRIKGSSKVEDSVSQSDLVIEAI-------------VENMDIKHKLFTSVDKIAPASAIL--ASNTSSLSITEIASVTNR 103 (160)
Q Consensus 39 ~~i~~~~~~~~al~~adlViEav-------------~E~l~~K~~v~~~l~~~~~~~~ii--asnTS~l~i~~la~~~~~ 103 (160)
.+++.++|+ +++++||+||+++ .||+++|+++++++++.| |+++| +||++++-..-+......
T Consensus 64 ~~i~~t~d~-~~l~~aD~Vi~aag~~~pG~tR~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~sNP~~~~t~~~~~~~~~ 141 (303)
T 2i6t_A 64 PNVEISKDL-SASAHSKVVIFTVNSLGSSQSYLDVVQSNVDMFRALVPALGHYS-QHSVLLVASQPVEIMTYVTWKLSTF 141 (303)
T ss_dssp TTEEEESCG-GGGTTCSEEEECCCC----CCHHHHHHHHHHHHHHHHHHHHHHT-TTCEEEECSSSHHHHHHHHHHHHCC
T ss_pred CCeEEeCCH-HHHCCCCEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEcCChHHHHHHHHHHhcCC
Confidence 478888899 6899999999997 999999999999999999 77765 899555222222222233
Q ss_pred -CCcEEEeecCCCCCCCceEEEecCCCCCHHHHHHHHHHHHHcCCeE
Q psy3942 104 -KDKFVGLHFFNPVPMMKLLEVIRTNDTSDATYNAVTEWGKSIGKTT 149 (160)
Q Consensus 104 -p~r~ig~Hf~~P~~~~~lVEvv~~~~T~~~~~~~~~~~~~~lgk~p 149 (160)
|+|++|+ .|.-++...-..+++.+|..|
T Consensus 142 p~~rviG~------------------gt~Ld~~R~~~~la~~lgv~~ 170 (303)
T 2i6t_A 142 PANRVIGI------------------GCNLDSQRLQYIITNVLKAQT 170 (303)
T ss_dssp CGGGEEEC------------------TTHHHHHHHHHHHHHTSCCTT
T ss_pred CHHHeeCC------------------CCCchHHHHHHHHHHHcCCCh
Confidence 7899998 444444444445556677643
No 23
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=98.61 E-value=1.1e-07 Score=77.94 Aligned_cols=110 Identities=15% Similarity=0.139 Sum_probs=90.1
Q ss_pred CceecCChhhhcCCCcEEEEeccCChHHHHHHHHHHhhhCCCCcEEeecCCCCCHHHHhcccCC---CCcEEEeecCCCC
Q psy3942 40 RIKGSSKVEDSVSQSDLVIEAIVENMDIKHKLFTSVDKIAPASAILASNTSSLSITEIASVTNR---KDKFVGLHFFNPV 116 (160)
Q Consensus 40 ~i~~~~~~~~al~~adlViEav~E~l~~K~~v~~~l~~~~~~~~iiasnTS~l~i~~la~~~~~---p~r~ig~Hf~~P~ 116 (160)
.++++++..++++++|+||-|++ .....+++.++...++++++|.+.+.++++..|...+.. +.++++.|+..|.
T Consensus 71 G~~~~~~~~e~~~~aDvVilav~--~~~~~~vl~~l~~~l~~~~ivvs~s~gi~~~~l~~~l~~~~~~~~vv~~~p~~p~ 148 (322)
T 2izz_A 71 GVKLTPHNKETVQHSDVLFLAVK--PHIIPFILDEIGADIEDRHIVVSCAAGVTISSIEKKLSAFRPAPRVIRCMTNTPV 148 (322)
T ss_dssp TCEEESCHHHHHHHCSEEEECSC--GGGHHHHHHHHGGGCCTTCEEEECCTTCCHHHHHHHHHTTSSCCEEEEEECCGGG
T ss_pred CCEEeCChHHHhccCCEEEEEeC--HHHHHHHHHHHHhhcCCCCEEEEeCCCCCHHHHHHHHhhcCCCCeEEEEeCCcHH
Confidence 36667777677889999999999 457778999999989999999999999999888766543 4589999998888
Q ss_pred CCCceEEEe-cCCCCCHHHHHHHHHHHHHcCCeEEE
Q psy3942 117 PMMKLLEVI-RTNDTSDATYNAVTEWGKSIGKTTIV 151 (160)
Q Consensus 117 ~~~~lVEvv-~~~~T~~~~~~~~~~~~~~lgk~pv~ 151 (160)
....-..++ .|..++++..+.+..+++.+|+.+.+
T Consensus 149 ~~~~g~~v~~~g~~~~~~~~~~v~~ll~~~G~~~~~ 184 (322)
T 2izz_A 149 VVREGATVYATGTHAQVEDGRLMEQLLSSVGFCTEV 184 (322)
T ss_dssp GGTCEEEEEEECTTCCHHHHHHHHHHHHTTEEEEEC
T ss_pred HHcCCeEEEEeCCCCCHHHHHHHHHHHHhCCCEEEe
Confidence 766555555 67778899999999999999986544
No 24
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=98.61 E-value=1.4e-07 Score=74.27 Aligned_cols=106 Identities=15% Similarity=0.171 Sum_probs=84.6
Q ss_pred CceecCChhhhcCCCcEEEEeccCChHHHHHHHHHHhhhCCCCcEEeecCCCCCHHHHhcccCCCCcEEEeecCC-CCCC
Q psy3942 40 RIKGSSKVEDSVSQSDLVIEAIVENMDIKHKLFTSVDKIAPASAILASNTSSLSITEIASVTNRKDKFVGLHFFN-PVPM 118 (160)
Q Consensus 40 ~i~~~~~~~~al~~adlViEav~E~l~~K~~v~~~l~~~~~~~~iiasnTS~l~i~~la~~~~~p~r~ig~Hf~~-P~~~ 118 (160)
.++.++++.+++ ++|+|+.|+| ....++++.++.. + +++|.+.++++++..|.+.+..+.++++. +.| |...
T Consensus 45 g~~~~~~~~~~~-~~D~vi~~v~--~~~~~~v~~~l~~--~-~~ivv~~~~g~~~~~l~~~~~~~~~~v~~-~~~~~~~~ 117 (263)
T 1yqg_A 45 GVETSATLPELH-SDDVLILAVK--PQDMEAACKNIRT--N-GALVLSVAAGLSVGTLSRYLGGTRRIVRV-MPNTPGKI 117 (263)
T ss_dssp CCEEESSCCCCC-TTSEEEECSC--HHHHHHHHTTCCC--T-TCEEEECCTTCCHHHHHHHTTSCCCEEEE-ECCGGGGG
T ss_pred CCEEeCCHHHHh-cCCEEEEEeC--chhHHHHHHHhcc--C-CCEEEEecCCCCHHHHHHHcCCCCcEEEE-cCCHHHHH
Confidence 466677776678 9999999999 4555678777765 4 89999999999999998888766689998 555 4443
Q ss_pred C-ceEEEecCCCCCHHHHHHHHHHHHHcCCeEEEec
Q psy3942 119 M-KLLEVIRTNDTSDATYNAVTEWGKSIGKTTIVCK 153 (160)
Q Consensus 119 ~-~lVEvv~~~~T~~~~~~~~~~~~~~lgk~pv~v~ 153 (160)
. ....++.+..++++.++.+..+++.+|+.+ .+.
T Consensus 118 ~~g~~~i~~~~~~~~~~~~~~~~l~~~~g~~~-~~~ 152 (263)
T 1yqg_A 118 GLGVSGMYAEAEVSETDRRIADRIMKSVGLTV-WLD 152 (263)
T ss_dssp TCEEEEEECCTTSCHHHHHHHHHHHHTTEEEE-ECS
T ss_pred cCceEEEEcCCCCCHHHHHHHHHHHHhCCCEE-EeC
Confidence 3 367788999999999999999999999876 554
No 25
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=98.55 E-value=5e-07 Score=71.81 Aligned_cols=108 Identities=9% Similarity=0.096 Sum_probs=83.3
Q ss_pred ecCChhhhcCCCcEEEEeccCChHHHHHHHHHHhhhCCCCcEEeecCCCCCHHHHhcccCCCCcEEEeecCCCCC-----
Q psy3942 43 GSSKVEDSVSQSDLVIEAIVENMDIKHKLFTSVDKIAPASAILASNTSSLSITEIASVTNRKDKFVGLHFFNPVP----- 117 (160)
Q Consensus 43 ~~~~~~~al~~adlViEav~E~l~~K~~v~~~l~~~~~~~~iiasnTS~l~i~~la~~~~~p~r~ig~Hf~~P~~----- 117 (160)
.+++++++ .++|+||.|+|.+ ...+++.++...++++++|.+ +++.+...+........|+++.|++....
T Consensus 48 ~~~~~~~~-~~~D~vi~av~~~--~~~~~~~~l~~~~~~~~~vv~-~~~~~~~~~~~~~~~~~~~~~~~p~~g~~~~gp~ 123 (279)
T 2f1k_A 48 AGQDLSLL-QTAKIIFLCTPIQ--LILPTLEKLIPHLSPTAIVTD-VASVKTAIAEPASQLWSGFIGGHPMAGTAAQGID 123 (279)
T ss_dssp EESCGGGG-TTCSEEEECSCHH--HHHHHHHHHGGGSCTTCEEEE-CCSCCHHHHHHHHHHSTTCEEEEECCCCSCSSGG
T ss_pred ccCCHHHh-CCCCEEEEECCHH--HHHHHHHHHHhhCCCCCEEEE-CCCCcHHHHHHHHHHhCCEeecCcccCCccCCHH
Confidence 46677666 9999999999964 677899999999999998876 46676654433222223899999876221
Q ss_pred -------CCceEEEecCCCCCHHHHHHHHHHHHHcCCeEEEecC
Q psy3942 118 -------MMKLLEVIRTNDTSDATYNAVTEWGKSIGKTTIVCKD 154 (160)
Q Consensus 118 -------~~~lVEvv~~~~T~~~~~~~~~~~~~~lgk~pv~v~d 154 (160)
..+.+.++++..++++..+.+..++..+|+.++.+.|
T Consensus 124 ~a~~~~~~g~~~~~~~~~~~~~~~~~~v~~l~~~~g~~~~~~~~ 167 (279)
T 2f1k_A 124 GAEENLFVNAPYVLTPTEYTDPEQLACLRSVLEPLGVKIYLCTP 167 (279)
T ss_dssp GCCTTTTTTCEEEEEECTTCCHHHHHHHHHHHGGGTCEEEECCH
T ss_pred HHhHHHhCCCcEEEecCCCCCHHHHHHHHHHHHHcCCEEEEcCH
Confidence 2347889999899999999999999999999988754
No 26
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=98.53 E-value=3.5e-08 Score=81.72 Aligned_cols=91 Identities=9% Similarity=0.115 Sum_probs=69.0
Q ss_pred cCceecCChhhhcCCCcEEEEec--cCCh-----------------HHHHHHHHHHhhhCCCCcEE--eecCCCCCHHHH
Q psy3942 39 SRIKGSSKVEDSVSQSDLVIEAI--VENM-----------------DIKHKLFTSVDKIAPASAIL--ASNTSSLSITEI 97 (160)
Q Consensus 39 ~~i~~~~~~~~al~~adlViEav--~E~l-----------------~~K~~v~~~l~~~~~~~~ii--asnTS~l~i~~l 97 (160)
.+|+.++|+++++++||+||+++ |++. .++++++++|++.| |++++ +||++++. +.+
T Consensus 64 ~~i~~t~d~~ea~~~aDiVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~vi~~tNP~~~~-t~~ 141 (331)
T 1pzg_A 64 VSVRAEYSYEAALTGADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYC-PKTFIIVVTNPLDCM-VKV 141 (331)
T ss_dssp CCEEEECSHHHHHTTCSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHC-TTCEEEECCSSHHHH-HHH
T ss_pred CEEEEeCCHHHHhCCCCEEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCcEEEEEcCchHHH-HHH
Confidence 57888999976899999999999 7653 45999999999998 77876 89999985 677
Q ss_pred hcccC--CCCcEEEeecCCCCCCCceEEEecCCCCCHHHHHHHHHHHHHcCCeE
Q psy3942 98 ASVTN--RKDKFVGLHFFNPVPMMKLLEVIRTNDTSDATYNAVTEWGKSIGKTT 149 (160)
Q Consensus 98 a~~~~--~p~r~ig~Hf~~P~~~~~lVEvv~~~~T~~~~~~~~~~~~~~lgk~p 149 (160)
+.... +|+||+|+ .|.-++...-..+++.+|..|
T Consensus 142 ~~~~~~~~~~rviG~------------------gt~LD~~R~~~~la~~lgv~~ 177 (331)
T 1pzg_A 142 MCEASGVPTNMICGM------------------ACMLDSGRFRRYVADALSVSP 177 (331)
T ss_dssp HHHHHCCCGGGEEEC------------------CHHHHHHHHHHHHHHHHTSCG
T ss_pred HHHhcCCChhcEEec------------------cchHHHHHHHHHHHHHhCCCH
Confidence 65443 68899998 355555333344446687654
No 27
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=98.53 E-value=2.3e-07 Score=73.07 Aligned_cols=107 Identities=14% Similarity=0.159 Sum_probs=85.5
Q ss_pred ceecCChhhhcCCCcEEEEeccCChHHHHHHHHHHhhhCCCCcEEeecCCCCCHHHHhcccCCCCcEEEeecCCCCCCCc
Q psy3942 41 IKGSSKVEDSVSQSDLVIEAIVENMDIKHKLFTSVDKIAPASAILASNTSSLSITEIASVTNRKDKFVGLHFFNPVPMMK 120 (160)
Q Consensus 41 i~~~~~~~~al~~adlViEav~E~l~~K~~v~~~l~~~~~~~~iiasnTS~l~i~~la~~~~~p~r~ig~Hf~~P~~~~~ 120 (160)
+..++++++.++++|+|+.|+|. ....+++.++ .+++++.+.++++++..+.....+..+++..|+..|.....
T Consensus 48 ~~~~~~~~~~~~~~D~Vi~~v~~--~~~~~v~~~l----~~~~~vv~~~~~~~~~~l~~~~~~~~~~v~~~p~~~~~~~~ 121 (259)
T 2ahr_A 48 LPYAMSHQDLIDQVDLVILGIKP--QLFETVLKPL----HFKQPIISMAAGISLQRLATFVGQDLPLLRIMPNMNAQILQ 121 (259)
T ss_dssp CCBCSSHHHHHHTCSEEEECSCG--GGHHHHHTTS----CCCSCEEECCTTCCHHHHHHHHCTTSCEEEEECCGGGGGTC
T ss_pred CEeeCCHHHHHhcCCEEEEEeCc--HhHHHHHHHh----ccCCEEEEeCCCCCHHHHHHhcCCCCCEEEEcCCchHHHcC
Confidence 55677887778899999999993 3445666554 37889999999999999988877666899888877766554
Q ss_pred -eEEEecCCCCCHHHHHHHHHHHHHcCCeEEEecC
Q psy3942 121 -LLEVIRTNDTSDATYNAVTEWGKSIGKTTIVCKD 154 (160)
Q Consensus 121 -lVEvv~~~~T~~~~~~~~~~~~~~lgk~pv~v~d 154 (160)
...++.+..++++.++.+..+++.+| .++.+.+
T Consensus 122 g~~~i~~~~~~~~~~~~~~~~ll~~~G-~~~~~~~ 155 (259)
T 2ahr_A 122 SSTALTGNALVSQELQARVRDLTDSFG-STFDISE 155 (259)
T ss_dssp EEEEEEECTTCCHHHHHHHHHHHHTTE-EEEECCG
T ss_pred ceEEEEcCCCCCHHHHHHHHHHHHhCC-CEEEecH
Confidence 67788899999999999999999999 4666643
No 28
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=98.50 E-value=5.1e-07 Score=71.90 Aligned_cols=107 Identities=14% Similarity=0.163 Sum_probs=81.6
Q ss_pred ecCChhhhcC-CCcEEEEeccCChHHHHHHHHHHhhhCCCCcEEeecCCC--CCHHHHhcccCCCCcEEEeecCCCCC--
Q psy3942 43 GSSKVEDSVS-QSDLVIEAIVENMDIKHKLFTSVDKIAPASAILASNTSS--LSITEIASVTNRKDKFVGLHFFNPVP-- 117 (160)
Q Consensus 43 ~~~~~~~al~-~adlViEav~E~l~~K~~v~~~l~~~~~~~~iiasnTS~--l~i~~la~~~~~p~r~ig~Hf~~P~~-- 117 (160)
.+++++++++ ++|+|+.|+|... -.+++.++...++++++|...++. ..+..+...+. +++++.|++..+.
T Consensus 51 ~~~~~~~~~~~~aDvVilavp~~~--~~~v~~~l~~~l~~~~iv~~~~~~~~~~~~~l~~~l~--~~~v~~~p~~~~~~~ 126 (281)
T 2g5c_A 51 GTTSIAKVEDFSPDFVMLSSPVRT--FREIAKKLSYILSEDATVTDQGSVKGKLVYDLENILG--KRFVGGHPIAGTEKS 126 (281)
T ss_dssp EESCGGGGGGTCCSEEEECSCHHH--HHHHHHHHHHHSCTTCEEEECCSCCTHHHHHHHHHHG--GGEECEEEECCCSCC
T ss_pred ccCCHHHHhcCCCCEEEEcCCHHH--HHHHHHHHHhhCCCCcEEEECCCCcHHHHHHHHHhcc--ccceeeccccCCccC
Confidence 4567766788 9999999999874 337888898888899877753332 22345555553 3599999877532
Q ss_pred ----------CCceEEEecCCCCCHHHHHHHHHHHHHcCCeEEEec
Q psy3942 118 ----------MMKLLEVIRTNDTSDATYNAVTEWGKSIGKTTIVCK 153 (160)
Q Consensus 118 ----------~~~lVEvv~~~~T~~~~~~~~~~~~~~lgk~pv~v~ 153 (160)
....+.++++..++++..+.+..+++.+|+.++.+.
T Consensus 127 gp~~a~~~l~~g~~~~~~~~~~~~~~~~~~v~~l~~~~g~~~~~~~ 172 (281)
T 2g5c_A 127 GVEYSLDNLYEGKKVILTPTKKTDKKRLKLVKRVWEDVGGVVEYMS 172 (281)
T ss_dssp SGGGCCSSTTTTCEEEECCCSSSCHHHHHHHHHHHHHTTCEEEECC
T ss_pred ChhhhhhHHhCCCCEEEecCCCCCHHHHHHHHHHHHHcCCEEEEcC
Confidence 345688999989999999999999999999988875
No 29
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=98.47 E-value=5.8e-08 Score=80.15 Aligned_cols=70 Identities=20% Similarity=0.338 Sum_probs=57.5
Q ss_pred hcCceecCChhhhcCCCcEEEEec--cCC-----------------hHHHHHHHHHHhhhCCCCcEE--eecCCCCCHHH
Q psy3942 38 LSRIKGSSKVEDSVSQSDLVIEAI--VEN-----------------MDIKHKLFTSVDKIAPASAIL--ASNTSSLSITE 96 (160)
Q Consensus 38 l~~i~~~~~~~~al~~adlViEav--~E~-----------------l~~K~~v~~~l~~~~~~~~ii--asnTS~l~i~~ 96 (160)
..+|+.++|+ +++++||+||+++ |++ .++|++++++|++.| |++++ +||++++. +.
T Consensus 58 ~~~i~~t~d~-~al~~aD~Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~tNP~~~~-t~ 134 (322)
T 1t2d_A 58 NCKVSGSNTY-DDLAGADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNC-PNAFIIVVTNPVDVM-VQ 134 (322)
T ss_dssp CCCEEEECCG-GGGTTCSEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHC-TTSEEEECSSSHHHH-HH
T ss_pred CcEEEECCCH-HHhCCCCEEEEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecCChHHH-HH
Confidence 3578888999 6899999999998 654 358999999999998 77754 89998885 67
Q ss_pred HhcccC--CCCcEEEe
Q psy3942 97 IASVTN--RKDKFVGL 110 (160)
Q Consensus 97 la~~~~--~p~r~ig~ 110 (160)
++.... +|+||+|+
T Consensus 135 ~~~~~~g~~~~rviG~ 150 (322)
T 1t2d_A 135 LLHQHSGVPKNKIIGL 150 (322)
T ss_dssp HHHHHHCCCGGGEEEC
T ss_pred HHHHhcCCChHHEEec
Confidence 765544 68899998
No 30
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=98.45 E-value=1e-07 Score=76.31 Aligned_cols=101 Identities=11% Similarity=0.105 Sum_probs=72.3
Q ss_pred ecCChhhhcCCCcEEEEeccCChHHHHHHHHHHhhhCCCCcEEeecCCCCCHHHHhcccCCCCcEEEee----cCCCCC-
Q psy3942 43 GSSKVEDSVSQSDLVIEAIVENMDIKHKLFTSVDKIAPASAILASNTSSLSITEIASVTNRKDKFVGLH----FFNPVP- 117 (160)
Q Consensus 43 ~~~~~~~al~~adlViEav~E~l~~K~~v~~~l~~~~~~~~iiasnTS~l~i~~la~~~~~p~r~ig~H----f~~P~~- 117 (160)
.++++++.++++|+||.|+|.+. +.+++.++. .++++|.+.+++++++.+... ++.+.| |.||+.
T Consensus 48 ~~~~~~~~~~~~DvVilav~~~~--~~~v~~~l~---~~~~ivi~~s~~~~~~~l~~~-----~~~~~~p~~~~~g~~~~ 117 (276)
T 2i76_A 48 KAATLEKHPELNGVVFVIVPDRY--IKTVANHLN---LGDAVLVHCSGFLSSEIFKKS-----GRASIHPNFSFSSLEKA 117 (276)
T ss_dssp CCCSSCCCCC---CEEECSCTTT--HHHHHTTTC---CSSCCEEECCSSSCGGGGCSS-----SEEEEEECSCC--CTTG
T ss_pred ccCCHHHHHhcCCEEEEeCChHH--HHHHHHHhc---cCCCEEEECCCCCcHHHHHHh-----hccccchhhhcCCCchh
Confidence 56677666889999999999987 678887775 678888876668888877654 567788 556433
Q ss_pred CCceEEEecCCCCCHHHHHHHHHHHHHcCCeEEEec
Q psy3942 118 MMKLLEVIRTNDTSDATYNAVTEWGKSIGKTTIVCK 153 (160)
Q Consensus 118 ~~~lVEvv~~~~T~~~~~~~~~~~~~~lgk~pv~v~ 153 (160)
...+.++.....++++..+.+..+++.+|+.++.+.
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~l~~~lG~~~~~v~ 153 (276)
T 2i76_A 118 LEMKDQIVFGLEGDERGLPIVKKIAEEISGKYFVIP 153 (276)
T ss_dssp GGCGGGCCEEECCCTTTHHHHHHHHHHHCSCEEECC
T ss_pred HHHhCCCeEEEEeChHHHHHHHHHHHHhCCCEEEEC
Confidence 222555555555677789999999999999999885
No 31
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=98.44 E-value=7.7e-07 Score=69.99 Aligned_cols=110 Identities=15% Similarity=0.173 Sum_probs=82.7
Q ss_pred CceecCChhhhcCCCcEEEEeccCChHHHHHHHHHHhhhCCCCcEEeecCCCCCHHHHhcccCCCCcEEEeecCCCCCCC
Q psy3942 40 RIKGSSKVEDSVSQSDLVIEAIVENMDIKHKLFTSVDKIAPASAILASNTSSLSITEIASVTNRKDKFVGLHFFNPVPMM 119 (160)
Q Consensus 40 ~i~~~~~~~~al~~adlViEav~E~l~~K~~v~~~l~~~~~~~~iiasnTS~l~i~~la~~~~~p~r~ig~Hf~~P~~~~ 119 (160)
.++.+++..++++++|+||.|++.. ..++++.++...+ +++++.|.++++++..+...+....+++..-+-.|....
T Consensus 45 g~~~~~~~~~~~~~~D~vi~~v~~~--~~~~v~~~l~~~l-~~~~vv~~~~gi~~~~l~~~~~~~~~~v~~~p~~p~~~~ 121 (262)
T 2rcy_A 45 TLNYMSSNEELARHCDIIVCAVKPD--IAGSVLNNIKPYL-SSKLLISICGGLNIGKLEEMVGSENKIVWVMPNTPCLVG 121 (262)
T ss_dssp SSEECSCHHHHHHHCSEEEECSCTT--THHHHHHHSGGGC-TTCEEEECCSSCCHHHHHHHHCTTSEEEEEECCGGGGGT
T ss_pred ceEEeCCHHHHHhcCCEEEEEeCHH--HHHHHHHHHHHhc-CCCEEEEECCCCCHHHHHHHhCCCCcEEEECCChHHHHc
Confidence 4566677766788999999999954 5778999998888 688899999999999888877554355421112233322
Q ss_pred c-eEEEecCCCCCHHHHHHHHHHHHHcCCeEEEec
Q psy3942 120 K-LLEVIRTNDTSDATYNAVTEWGKSIGKTTIVCK 153 (160)
Q Consensus 120 ~-lVEvv~~~~T~~~~~~~~~~~~~~lgk~pv~v~ 153 (160)
. +.-++.+..++++.++.+..+++.+|+ ++.+.
T Consensus 122 ~g~~~~~~~~~~~~~~~~~~~~ll~~~G~-~~~~~ 155 (262)
T 2rcy_A 122 EGSFIYCSNKNVNSTDKKYVNDIFNSCGI-IHEIK 155 (262)
T ss_dssp CEEEEEEECTTCCHHHHHHHHHHHHTSEE-EEECC
T ss_pred CCeEEEEeCCCCCHHHHHHHHHHHHhCCC-EEEeC
Confidence 2 444667888999999999999999998 87774
No 32
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=98.43 E-value=2.6e-07 Score=70.53 Aligned_cols=107 Identities=19% Similarity=0.170 Sum_probs=79.6
Q ss_pred ceecCChhhhcCCCcEEEEeccCChHHHHHHHHHHhhhCCCCcEEeecCCCCC--------------HHHHhcccCCCCc
Q psy3942 41 IKGSSKVEDSVSQSDLVIEAIVENMDIKHKLFTSVDKIAPASAILASNTSSLS--------------ITEIASVTNRKDK 106 (160)
Q Consensus 41 i~~~~~~~~al~~adlViEav~E~l~~K~~v~~~l~~~~~~~~iiasnTS~l~--------------i~~la~~~~~p~r 106 (160)
+.. ++++++++++|+||.|++.+. -++++.++...+ +++++.+.+++++ +.+|++.+.. .+
T Consensus 53 ~~~-~~~~~~~~~~D~Vi~~~~~~~--~~~~~~~l~~~~-~~~~vi~~~~g~~~~~~~~~~~~g~~~~~~l~~~~~~-~~ 127 (212)
T 1jay_A 53 ITG-MKNEDAAEACDIAVLTIPWEH--AIDTARDLKNIL-REKIVVSPLVPVSRGAKGFTYSSERSAAEIVAEVLES-EK 127 (212)
T ss_dssp EEE-EEHHHHHHHCSEEEECSCHHH--HHHHHHHTHHHH-TTSEEEECCCCEECCTTCCEECCSSCHHHHHHHHHTC-SC
T ss_pred CCh-hhHHHHHhcCCEEEEeCChhh--HHHHHHHHHHHc-CCCEEEEcCCCcCcCCceeecCCCCcHHHHHHHhCCC-Ce
Confidence 443 566667899999999999644 348888887766 4899999999887 6888887753 67
Q ss_pred EEEeecCCCCCC-------CceEEEecCCCCCHHHHHHHHHHHHHc-CCeEEEecC
Q psy3942 107 FVGLHFFNPVPM-------MKLLEVIRTNDTSDATYNAVTEWGKSI-GKTTIVCKD 154 (160)
Q Consensus 107 ~ig~Hf~~P~~~-------~~lVEvv~~~~T~~~~~~~~~~~~~~l-gk~pv~v~d 154 (160)
++..|...|... ..+..++.|. +++.++.+.++++.+ |+.|+.+.+
T Consensus 128 ~v~~~~~~~~~~~~~~~~~~~~~~~~~g~--~~~~~~~v~~l~~~~~G~~~~~~~~ 181 (212)
T 1jay_A 128 VVSALHTIPAARFANLDEKFDWDVPVCGD--DDESKKVVMSLISEIDGLRPLDAGP 181 (212)
T ss_dssp EEECCTTCCHHHHHCTTCCCCEEEEEEES--CHHHHHHHHHHHHHSTTEEEEEEES
T ss_pred EEEEccchHHHHhhCcCCCCCccEEEECC--cHHHHHHHHHHHHHcCCCCceeccc
Confidence 776543322211 1255677766 689999999999999 999998865
No 33
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=98.33 E-value=5.5e-07 Score=78.01 Aligned_cols=113 Identities=12% Similarity=0.210 Sum_probs=85.3
Q ss_pred hcCceecCChhhhcCCCcEEEEeccC--------ChHHHHHHHHHHhhhCCCCcEEeecCCCCCHH---HHhccc----C
Q psy3942 38 LSRIKGSSKVEDSVSQSDLVIEAIVE--------NMDIKHKLFTSVDKIAPASAILASNTSSLSIT---EIASVT----N 102 (160)
Q Consensus 38 l~~i~~~~~~~~al~~adlViEav~E--------~l~~K~~v~~~l~~~~~~~~iiasnTS~l~i~---~la~~~----~ 102 (160)
.+++++++|+++++++||+||.|+|. |+...+++++.|...+++++++. +.|++++. +++..+ .
T Consensus 69 ~~~l~~ttd~~~a~~~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~iVV-~~STv~~gt~~~l~~~l~~~~~ 147 (478)
T 2y0c_A 69 AGRLRFSTDIEAAVAHGDVQFIAVGTPPDEDGSADLQYVLAAARNIGRYMTGFKVIV-DKSTVPVGTAERVRAAVAEELA 147 (478)
T ss_dssp TTCEEEECCHHHHHHHCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEE-ECSCCCTTHHHHHHHHHHHHHH
T ss_pred cCCEEEECCHHHHhhcCCEEEEEeCCCcccCCCccHHHHHHHHHHHHHhcCCCCEEE-EeCCcCCCchHHHHHHHHHHhc
Confidence 36799999997789999999999999 67999999999999999999884 56677662 222221 1
Q ss_pred CC---CcEEEeecCCCCCCCceE---------EEecCCCCCH----HHHHHHHHHHHHcCC--eEEEecC
Q psy3942 103 RK---DKFVGLHFFNPVPMMKLL---------EVIRTNDTSD----ATYNAVTEWGKSIGK--TTIVCKD 154 (160)
Q Consensus 103 ~p---~r~ig~Hf~~P~~~~~lV---------Evv~~~~T~~----~~~~~~~~~~~~lgk--~pv~v~d 154 (160)
.+ .++ .++++|....+.. .|+.|.. ++ ++.+.+..+++.+++ .++++.|
T Consensus 148 ~g~~~~~~--~v~~~Pe~~~eG~~~~~~~~p~~iviG~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d 214 (478)
T 2y0c_A 148 KRGGDQMF--SVVSNPEFLKEGAAVDDFTRPDRIVIGCD-DDVPGERARELMKKLYAPFNRNHERTLYMD 214 (478)
T ss_dssp HTTCCCCE--EEEECCCCCCTTCHHHHHHSCSCEEEECC-SSHHHHHHHHHHHHHTGGGGSSSCCEEEEC
T ss_pred CCCCCccE--EEEEChhhhcccceeeccCCCCEEEEEEC-CCcccHHHHHHHHHHHHHHhccCCeEEcCC
Confidence 12 222 3689998888766 5777764 34 788999999988876 6777655
No 34
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=98.33 E-value=6.1e-07 Score=74.75 Aligned_cols=108 Identities=13% Similarity=0.183 Sum_probs=80.6
Q ss_pred ceecCChhhhcC----CCcEEEEeccCChHHHHHHHHHHhhhCCCCcEEeecCCC--CCHHHHhcccCCCCcEEEeecCC
Q psy3942 41 IKGSSKVEDSVS----QSDLVIEAIVENMDIKHKLFTSVDKIAPASAILASNTSS--LSITEIASVTNRKDKFVGLHFFN 114 (160)
Q Consensus 41 i~~~~~~~~al~----~adlViEav~E~l~~K~~v~~~l~~~~~~~~iiasnTS~--l~i~~la~~~~~p~r~ig~Hf~~ 114 (160)
+..+++++++++ ++|+||-|+| .....++++++..+ +++++|...+|. ..+..+..... ..++++.|++.
T Consensus 52 ~~~~~~~~e~~~~a~~~aDlVilavP--~~~~~~vl~~l~~~-~~~~iv~Dv~Svk~~i~~~~~~~~~-~~~~v~~HPma 127 (341)
T 3ktd_A 52 FDVSADLEATLQRAAAEDALIVLAVP--MTAIDSLLDAVHTH-APNNGFTDVVSVKTAVYDAVKARNM-QHRYVGSHPMA 127 (341)
T ss_dssp CCEESCHHHHHHHHHHTTCEEEECSC--HHHHHHHHHHHHHH-CTTCCEEECCSCSHHHHHHHHHTTC-GGGEECEEECC
T ss_pred CeeeCCHHHHHHhcccCCCEEEEeCC--HHHHHHHHHHHHcc-CCCCEEEEcCCCChHHHHHHHHhCC-CCcEecCCccc
Confidence 345567655554 5799999999 56778999999887 788887544333 33445655443 46999999988
Q ss_pred CCCC------------CceEEEecCCCCCHH--------HHHHHHHHHHHcCCeEEEe
Q psy3942 115 PVPM------------MKLLEVIRTNDTSDA--------TYNAVTEWGKSIGKTTIVC 152 (160)
Q Consensus 115 P~~~------------~~lVEvv~~~~T~~~--------~~~~~~~~~~~lgk~pv~v 152 (160)
.+.. ...+=+++++.|+++ .++++..+++.+|+.++.+
T Consensus 128 G~e~sG~~aa~~~Lf~g~~~iltp~~~~~~e~~~~~~~~~~~~v~~l~~~~Ga~v~~~ 185 (341)
T 3ktd_A 128 GTANSGWSASMDGLFKRAVWVVTFDQLFDGTDINSTWISIWKDVVQMALAVGAEVVPS 185 (341)
T ss_dssp SCC-CCGGGCCSSTTTTCEEEECCGGGTSSCCCCHHHHHHHHHHHHHHHHTTCEEEEC
T ss_pred cccccchhhhhhHHhcCCeEEEEeCCCCChhhhccchHHHHHHHHHHHHHcCCEEEEe
Confidence 6542 224558888899988 9999999999999999887
No 35
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=98.32 E-value=3.9e-07 Score=73.42 Aligned_cols=111 Identities=7% Similarity=0.094 Sum_probs=75.2
Q ss_pred CceecCChhhhcCCCcEEEEeccCChHHHHHHHH--HHhhhCCCCcEEeecCCCCCHH--HHhcccCCC-CcEEEeecCC
Q psy3942 40 RIKGSSKVEDSVSQSDLVIEAIVENMDIKHKLFT--SVDKIAPASAILASNTSSLSIT--EIASVTNRK-DKFVGLHFFN 114 (160)
Q Consensus 40 ~i~~~~~~~~al~~adlViEav~E~l~~K~~v~~--~l~~~~~~~~iiasnTS~l~i~--~la~~~~~p-~r~ig~Hf~~ 114 (160)
.++.+++++++++++|+||.|+|++..++.-++. ++...+.++++|.+.++..+.+ +++..+... -+++.. +..
T Consensus 46 g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~~~~~l~~~~~vi~~st~~~~~~~~l~~~~~~~g~~~~~~-pv~ 124 (302)
T 2h78_A 46 GASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGLAMLDA-PVS 124 (302)
T ss_dssp TCEECSSHHHHHTTCSEEEECCSCHHHHHHHHHSSSCGGGSSCSSCEEEECSCCCHHHHHHHHHHHHHTTCCEEEC-CEE
T ss_pred CCeEcCCHHHHHhCCCeEEEECCCHHHHHHHHcCchhHHhcCCCCcEEEECCCCCHHHHHHHHHHHHHcCCEEEEE-Ecc
Confidence 4677888877889999999999999888865552 5666677777766544433333 466555322 234432 222
Q ss_pred CCC----CCceEEEecCCCCCHHHHHHHHHHHHHcCCeEEEecC
Q psy3942 115 PVP----MMKLLEVIRTNDTSDATYNAVTEWGKSIGKTTIVCKD 154 (160)
Q Consensus 115 P~~----~~~lVEvv~~~~T~~~~~~~~~~~~~~lgk~pv~v~d 154 (160)
+.. ...++.++.+ ++++++++..+++.+|+.++.+.+
T Consensus 125 ~~~~~~~~g~l~~~~~g---~~~~~~~~~~ll~~~g~~~~~~~~ 165 (302)
T 2h78_A 125 GGTAGAAAGTLTFMVGG---DAEALEKARPLFEAMGRNIFHAGP 165 (302)
T ss_dssp SCHHHHHHTCEEEEEES---CHHHHHHHHHHHHHHEEEEEEEES
T ss_pred CChhhHhcCCceEEeCC---CHHHHHHHHHHHHHhCCCeEEcCC
Confidence 211 1235666655 799999999999999999999865
No 36
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=98.32 E-value=4.2e-07 Score=74.63 Aligned_cols=95 Identities=20% Similarity=0.183 Sum_probs=72.3
Q ss_pred CceecCChhhhcCCCcEEEEeccC--------------ChHHHHHHHHHHhhhCCCCcE--EeecCCCCCHHHHhccc-C
Q psy3942 40 RIKGSSKVEDSVSQSDLVIEAIVE--------------NMDIKHKLFTSVDKIAPASAI--LASNTSSLSITEIASVT-N 102 (160)
Q Consensus 40 ~i~~~~~~~~al~~adlViEav~E--------------~l~~K~~v~~~l~~~~~~~~i--iasnTS~l~i~~la~~~-~ 102 (160)
++..+ ++ +++++||+||.|++. |..+++++++++.+.+ |+++ ++||++++ ++.++... .
T Consensus 56 ~i~~~-d~-~~~~~aDvViiav~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-~~~~ii~~tNp~~~-~~~~~~~~~~ 131 (319)
T 1a5z_A 56 NIYAG-DY-ADLKGSDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYA-PDSIVIVVTNPVDV-LTYFFLKESG 131 (319)
T ss_dssp EEEEC-CG-GGGTTCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEECSSSHHH-HHHHHHHHHT
T ss_pred EEEeC-CH-HHhCCCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEeCCcHHH-HHHHHHHHhC
Confidence 45544 66 579999999999996 3467899999999997 5664 47888876 35665443 3
Q ss_pred -CCCcEEEeecCCCCCCCceEEEecCCCCCHHHHHHHHHHHHHcCCeEEEecCcCccc
Q psy3942 103 -RKDKFVGLHFFNPVPMMKLLEVIRTNDTSDATYNAVTEWGKSIGKTTIVCKDTPGFT 159 (160)
Q Consensus 103 -~p~r~ig~Hf~~P~~~~~lVEvv~~~~T~~~~~~~~~~~~~~lgk~pv~v~d~pGfi 159 (160)
.|+|++|+ .|..++......+++.+|..| +|.+|||
T Consensus 132 ~~~~rviG~------------------~t~ld~~r~~~~la~~lgv~~---~~v~~~v 168 (319)
T 1a5z_A 132 MDPRKVFGS------------------GTVLDTARLRTLIAQHCGFSP---RSVHVYV 168 (319)
T ss_dssp CCTTTEEEC------------------TTHHHHHHHHHHHHHHHTCCG---GGEECCE
T ss_pred CChhhEEee------------------CccHHHHHHHHHHHHHhCcCH---HHceEEE
Confidence 68899998 888888888888889999765 5666665
No 37
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=98.20 E-value=5.7e-06 Score=66.94 Aligned_cols=101 Identities=16% Similarity=0.187 Sum_probs=75.6
Q ss_pred ChhhhcCCCcEEEEeccCChHHHHHHHHHHhhhCCCCcEEeecCCCCC---HHHHhcccCCCCcEEEeecCCCCCC----
Q psy3942 46 KVEDSVSQSDLVIEAIVENMDIKHKLFTSVDKIAPASAILASNTSSLS---ITEIASVTNRKDKFVGLHFFNPVPM---- 118 (160)
Q Consensus 46 ~~~~al~~adlViEav~E~l~~K~~v~~~l~~~~~~~~iiasnTS~l~---i~~la~~~~~p~r~ig~Hf~~P~~~---- 118 (160)
+..+++++||+||-|+|... ..+++.++...++++++|...+| .+ +..+.... |.|+++.|++..+..
T Consensus 58 ~~~~~~~~aDvVilavp~~~--~~~vl~~l~~~l~~~~iv~~~~s-vk~~~~~~~~~~~--~~~~v~~hP~~g~~~~~~~ 132 (298)
T 2pv7_A 58 VAESILANADVVIVSVPINL--TLETIERLKPYLTENMLLADLTS-VKREPLAKMLEVH--TGAVLGLHPMFGADIASMA 132 (298)
T ss_dssp GHHHHHTTCSEEEECSCGGG--HHHHHHHHGGGCCTTSEEEECCS-CCHHHHHHHHHHC--SSEEEEEEECSCTTCSCCT
T ss_pred CHHHHhcCCCEEEEeCCHHH--HHHHHHHHHhhcCCCcEEEECCC-CCcHHHHHHHHhc--CCCEEeeCCCCCCCchhhc
Confidence 45567899999999999876 78899999998999997775543 33 34454443 579999999765432
Q ss_pred CceEEEecCCCCCHHHHHHHHHHHHHcCCeEEEec
Q psy3942 119 MKLLEVIRTNDTSDATYNAVTEWGKSIGKTTIVCK 153 (160)
Q Consensus 119 ~~lVEvv~~~~T~~~~~~~~~~~~~~lgk~pv~v~ 153 (160)
...+-++++. +++.++.+.++++.+|..++.+.
T Consensus 133 g~~~~l~~~~--~~~~~~~v~~l~~~~G~~~~~~~ 165 (298)
T 2pv7_A 133 KQVVVRCDGR--FPERYEWLLEQIQIWGAKIYQTN 165 (298)
T ss_dssp TCEEEEEEEE--CGGGTHHHHHHHHHTTCEEEECC
T ss_pred CCeEEEecCC--CHHHHHHHHHHHHHcCCEEEECC
Confidence 2344455543 78889999999999999888764
No 38
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=98.15 E-value=1.2e-05 Score=64.11 Aligned_cols=103 Identities=11% Similarity=0.129 Sum_probs=76.0
Q ss_pred hcCCCcEEEEeccCChHHHHHHHHHHhhhCCCCcEEeecCCCCCH-HHHhcccCCCCcEE-EeecCCCCCCCc-------
Q psy3942 50 SVSQSDLVIEAIVENMDIKHKLFTSVDKIAPASAILASNTSSLSI-TEIASVTNRKDKFV-GLHFFNPVPMMK------- 120 (160)
Q Consensus 50 al~~adlViEav~E~l~~K~~v~~~l~~~~~~~~iiasnTS~l~i-~~la~~~~~p~r~i-g~Hf~~P~~~~~------- 120 (160)
+++++|+||.|++.+ .-.++++++...++++++|.+.+.+++. ..+++.+. +.+++ |.+++..+..+|
T Consensus 71 ~~~~~d~vi~~v~~~--~~~~v~~~l~~~l~~~~~iv~~~~g~~~~~~l~~~~~-~~~vi~g~~~~~~~~~~p~~~~~~~ 147 (316)
T 2ew2_A 71 QNEQVDLIIALTKAQ--QLDAMFKAIQPMITEKTYVLCLLNGLGHEDVLEKYVP-KENILVGITMWTAGLEGPGRVKLLG 147 (316)
T ss_dssp TSCCCSEEEECSCHH--HHHHHHHHHGGGCCTTCEEEECCSSSCTHHHHTTTSC-GGGEEEEEECCCCEEEETTEEEECS
T ss_pred cCCCCCEEEEEeccc--cHHHHHHHHHHhcCCCCEEEEecCCCCcHHHHHHHcC-CccEEEEEeeeeeEEcCCCEEEEec
Confidence 345999999999975 3478999999999999999999888887 45666664 34788 555433322222
Q ss_pred --eEEEecCCCCCHHHHHHHHHHHHHcCCeEEEecCc
Q psy3942 121 --LLEVIRTNDTSDATYNAVTEWGKSIGKTTIVCKDT 155 (160)
Q Consensus 121 --lVEvv~~~~T~~~~~~~~~~~~~~lgk~pv~v~d~ 155 (160)
.+.+.....++++..+.+..+++.+|+.+.+..|.
T Consensus 148 ~g~~~i~~~~~~~~~~~~~~~~ll~~~g~~~~~~~d~ 184 (316)
T 2ew2_A 148 DGEIELENIDPSGKKFALEVVDVFQKAGLNPSYSSNV 184 (316)
T ss_dssp CCCEEEEESSGGGHHHHHHHHHHHHHTTCCEEECTTH
T ss_pred CCcEEEeecCCCccHHHHHHHHHHHhCCCCcEEchhH
Confidence 23455556678999999999999999987777653
No 39
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=98.15 E-value=9.9e-07 Score=71.38 Aligned_cols=107 Identities=17% Similarity=0.294 Sum_probs=73.1
Q ss_pred cCChhhhcCCCcEEEEeccCChHHHHHHH--HHHhhhCCCCcEEeecCCCCCH--HHHhcccCCCCcEEEeecCC-CCC-
Q psy3942 44 SSKVEDSVSQSDLVIEAIVENMDIKHKLF--TSVDKIAPASAILASNTSSLSI--TEIASVTNRKDKFVGLHFFN-PVP- 117 (160)
Q Consensus 44 ~~~~~~al~~adlViEav~E~l~~K~~v~--~~l~~~~~~~~iiasnTS~l~i--~~la~~~~~p~r~ig~Hf~~-P~~- 117 (160)
+++++++++++|+||.|+|.+..++.-+| +.+...++++++|...++..+. .+++..+... |+||+. |..
T Consensus 55 ~~~~~e~~~~aDvvi~~vp~~~~~~~v~~~~~~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~----g~~~~~~pv~g 130 (303)
T 3g0o_A 55 AASAREFAGVVDALVILVVNAAQVRQVLFGEDGVAHLMKPGSAVMVSSTISSADAQEIAAALTAL----NLNMLDAPVSG 130 (303)
T ss_dssp ESSSTTTTTTCSEEEECCSSHHHHHHHHC--CCCGGGSCTTCEEEECSCCCHHHHHHHHHHHHTT----TCEEEECCEES
T ss_pred cCCHHHHHhcCCEEEEECCCHHHHHHHHhChhhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHc----CCeEEeCCCCC
Confidence 67777788999999999999888876655 6677788888877644433332 2454444221 334433 211
Q ss_pred ------CCceEEEecCCCCCHHHHHHHHHHHHHcCCeEEEecCcCc
Q psy3942 118 ------MMKLLEVIRTNDTSDATYNAVTEWGKSIGKTTIVCKDTPG 157 (160)
Q Consensus 118 ------~~~lVEvv~~~~T~~~~~~~~~~~~~~lgk~pv~v~d~pG 157 (160)
...++-++. +++++++++..+++.+|+.++.+.+.+|
T Consensus 131 ~~~~a~~g~l~~~~g---g~~~~~~~~~~ll~~~g~~~~~~~~~~g 173 (303)
T 3g0o_A 131 GAVKAAQGEMTVMAS---GSEAAFTRLKPVLDAVASNVYRISDTPG 173 (303)
T ss_dssp CHHHHHTTCEEEEEE---CCHHHHHHHHHHHHHHEEEEEEEESSTT
T ss_pred ChhhhhcCCeEEEeC---CCHHHHHHHHHHHHHHCCCEEECCCCCc
Confidence 113455554 3689999999999999999998876555
No 40
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=98.14 E-value=3.5e-06 Score=69.64 Aligned_cols=102 Identities=16% Similarity=0.201 Sum_probs=77.3
Q ss_pred ceecCChhhhcCCCcEEEEeccCChHHHHHHHH-HHhhhCCCCcEEeecCCCCCHHHHhcccCCCC--cEEEeecCCCCC
Q psy3942 41 IKGSSKVEDSVSQSDLVIEAIVENMDIKHKLFT-SVDKIAPASAILASNTSSLSITEIASVTNRKD--KFVGLHFFNPVP 117 (160)
Q Consensus 41 i~~~~~~~~al~~adlViEav~E~l~~K~~v~~-~l~~~~~~~~iiasnTS~l~i~~la~~~~~p~--r~ig~Hf~~P~~ 117 (160)
+..+ +++++++++|+|+-|+|.... .+++. ++...++++++|.+. +++.+ .+ .....|. ++++.|+..|.+
T Consensus 61 ~~~~-~~~e~~~~aDvVilavp~~~~--~~v~~~~i~~~l~~~~ivi~~-~gv~~-~~-~~~~~~~~~~vv~~~P~gp~~ 134 (338)
T 1np3_A 61 LKVA-DVKTAVAAADVVMILTPDEFQ--GRLYKEEIEPNLKKGATLAFA-HGFSI-HY-NQVVPRADLDVIMIAPKAPGH 134 (338)
T ss_dssp CEEE-CHHHHHHTCSEEEECSCHHHH--HHHHHHHTGGGCCTTCEEEES-CCHHH-HT-TSSCCCTTCEEEEEEESSCSH
T ss_pred CEEc-cHHHHHhcCCEEEEeCCcHHH--HHHHHHHHHhhCCCCCEEEEc-CCchh-HH-HhhcCCCCcEEEeccCCCCch
Confidence 4555 776778999999999998875 78898 999999999999876 55655 33 3333343 599999977765
Q ss_pred C-CceEE--------EecCCCCCHHHHHHHHHHHHHcCCe
Q psy3942 118 M-MKLLE--------VIRTNDTSDATYNAVTEWGKSIGKT 148 (160)
Q Consensus 118 ~-~~lVE--------vv~~~~T~~~~~~~~~~~~~~lgk~ 148 (160)
. ..+.+ +.++..++++..+.+.++++.+|..
T Consensus 135 a~~~l~~~G~g~~~ii~~~~~~~~~a~~~~~~l~~~lG~~ 174 (338)
T 1np3_A 135 TVRSEFVKGGGIPDLIAIYQDASGNAKNVALSYACGVGGG 174 (338)
T ss_dssp HHHHHHHTTCCCCEEEEEEECSSSCHHHHHHHHHHHTTHH
T ss_pred hHHHHHhccCCCeEEEEecCCCCHHHHHHHHHHHHHcCCC
Confidence 2 12222 6677788899999999999999994
No 41
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=98.13 E-value=1.7e-06 Score=69.91 Aligned_cols=112 Identities=14% Similarity=0.197 Sum_probs=76.2
Q ss_pred CceecCChhhhcCCCcEEEEeccCChHHHHHHHHHHhhhCCCCcEEeecCCCCCHH--HHhcccCC-CCcEEEeecCCCC
Q psy3942 40 RIKGSSKVEDSVSQSDLVIEAIVENMDIKHKLFTSVDKIAPASAILASNTSSLSIT--EIASVTNR-KDKFVGLHFFNPV 116 (160)
Q Consensus 40 ~i~~~~~~~~al~~adlViEav~E~l~~K~~v~~~l~~~~~~~~iiasnTS~l~i~--~la~~~~~-p~r~ig~Hf~~P~ 116 (160)
.++.+++++++++ +|+||.|+|++..++. ++..+...++++++|...++..+.+ +++..+.. .-+++....+.++
T Consensus 58 g~~~~~~~~~~~~-aDvvi~~vp~~~~~~~-v~~~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~~~~~pv~g~~ 135 (296)
T 3qha_A 58 GATLADSVADVAA-ADLIHITVLDDAQVRE-VVGELAGHAKPGTVIAIHSTISDTTAVELARDLKARDIHIVDAPVSGGA 135 (296)
T ss_dssp TCEECSSHHHHTT-SSEEEECCSSHHHHHH-HHHHHHTTCCTTCEEEECSCCCHHHHHHHHHHHGGGTCEEEECCEESCH
T ss_pred CCEEcCCHHHHHh-CCEEEEECCChHHHHH-HHHHHHHhcCCCCEEEEeCCCCHHHHHHHHHHHHHcCCEEEeCCCcCCH
Confidence 5778889977777 9999999999888775 4588888888888776554443332 45544432 2223332222211
Q ss_pred C---CCceEEEecCCCCCHHHHHHHHHHHHHcCCeEEEecCcCc
Q psy3942 117 P---MMKLLEVIRTNDTSDATYNAVTEWGKSIGKTTIVCKDTPG 157 (160)
Q Consensus 117 ~---~~~lVEvv~~~~T~~~~~~~~~~~~~~lgk~pv~v~d~pG 157 (160)
. ..+++.++.| ++++++++..+++.+|+.++.+.+ +|
T Consensus 136 ~~a~~g~l~~~~gg---~~~~~~~~~~ll~~~g~~~~~~g~-~g 175 (296)
T 3qha_A 136 AAAARGELATMVGA---DREVYERIKPAFKHWAAVVIHAGE-PG 175 (296)
T ss_dssp HHHHHTCEEEEEEC---CHHHHHHHHHHHHHHEEEEEEEES-TT
T ss_pred HHHhcCCccEEecC---CHHHHHHHHHHHHHHcCCeEEcCC-hh
Confidence 1 2346677765 689999999999999999998865 44
No 42
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=98.10 E-value=2.9e-06 Score=69.16 Aligned_cols=88 Identities=18% Similarity=0.194 Sum_probs=64.7
Q ss_pred CceecCChhhhcCCCcEEEEec--c------------CChHHHHHHHHHHhhhCCCCcEE--eecCCCCCHHHHhcccCC
Q psy3942 40 RIKGSSKVEDSVSQSDLVIEAI--V------------ENMDIKHKLFTSVDKIAPASAIL--ASNTSSLSITEIASVTNR 103 (160)
Q Consensus 40 ~i~~~~~~~~al~~adlViEav--~------------E~l~~K~~v~~~l~~~~~~~~ii--asnTS~l~i~~la~~~~~ 103 (160)
+++. +++ +++++||+||.++ | +|+++++++++++.+.+ |++++ +||++++....++..+ .
T Consensus 56 ~i~~-~~~-~a~~~aDvVIi~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~~~vi~~tNP~~~~~~~~~~~~-~ 131 (304)
T 2v6b_A 56 RVWH-GGH-SELADAQVVILTAGANQKPGESRLDLLEKNADIFRELVPQITRAA-PDAVLLVTSNPVDLLTDLATQLA-P 131 (304)
T ss_dssp EEEE-ECG-GGGTTCSEEEECC------------CHHHHHHHHHHHHHHHHHHC-SSSEEEECSSSHHHHHHHHHHHS-C
T ss_pred EEEE-CCH-HHhCCCCEEEEcCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHhC-CCeEEEEecCchHHHHHHHHHhC-C
Confidence 3443 567 5899999999999 4 47889999999999997 66654 7998887655555555 8
Q ss_pred CCcEEEeecCCCCCCCceEEEecCCCCCHHHHHHHHHHHHHcCCeE
Q psy3942 104 KDKFVGLHFFNPVPMMKLLEVIRTNDTSDATYNAVTEWGKSIGKTT 149 (160)
Q Consensus 104 p~r~ig~Hf~~P~~~~~lVEvv~~~~T~~~~~~~~~~~~~~lgk~p 149 (160)
|+|++|+ .|.-++......+++.+|..|
T Consensus 132 ~~rviG~------------------gt~Ld~~r~~~~la~~l~v~~ 159 (304)
T 2v6b_A 132 GQPVIGS------------------GTVLDSARFRHLMAQHAGVDG 159 (304)
T ss_dssp SSCEEEC------------------TTHHHHHHHHHHHHHHHTSCG
T ss_pred hhcEEeC------------------CcCchHHHHHHHHHHHhCcCH
Confidence 8999997 555555555555667777643
No 43
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=98.10 E-value=1.2e-06 Score=70.20 Aligned_cols=111 Identities=10% Similarity=0.062 Sum_probs=75.9
Q ss_pred cCceecCChhhhcCCCcEEEEeccCChHHHHHHH--HHHhhhCCCCcEEeecCCCCCHH---HHhcccC-CCCcEEEeec
Q psy3942 39 SRIKGSSKVEDSVSQSDLVIEAIVENMDIKHKLF--TSVDKIAPASAILASNTSSLSIT---EIASVTN-RKDKFVGLHF 112 (160)
Q Consensus 39 ~~i~~~~~~~~al~~adlViEav~E~l~~K~~v~--~~l~~~~~~~~iiasnTS~l~i~---~la~~~~-~p~r~ig~Hf 112 (160)
..++.+++++++++++|+||.|+|++..++.-++ ..+...+++++++...+ +.++. +++..+. +.-+++. |+
T Consensus 43 ~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~l~~~l~~~~~vi~~s-t~~~~~~~~~~~~~~~~g~~~~~-~p 120 (287)
T 3pef_A 43 LGAERAATPCEVVESCPVTFAMLADPAAAEEVCFGKHGVLEGIGEGRGYVDMS-TVDPATSQRIGVAVVAKGGRFLE-AP 120 (287)
T ss_dssp TTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCHHHHCCTTCEEEECS-CCCHHHHHHHHHHHHHTTCEEEE-CC
T ss_pred CCCeecCCHHHHHhcCCEEEEEcCCHHHHHHHHcCcchHhhcCCCCCEEEeCC-CCCHHHHHHHHHHHHHhCCEEEE-CC
Confidence 3577888988888999999999999888887665 77888888888776554 43333 4444332 1123333 22
Q ss_pred CCCCC----CCceEEEecCCCCCHHHHHHHHHHHHHcCCeEEEecC
Q psy3942 113 FNPVP----MMKLLEVIRTNDTSDATYNAVTEWGKSIGKTTIVCKD 154 (160)
Q Consensus 113 ~~P~~----~~~lVEvv~~~~T~~~~~~~~~~~~~~lgk~pv~v~d 154 (160)
....+ ...++-++.| ++++++++..+++.+|+.++.+.+
T Consensus 121 v~g~~~~a~~g~l~~~~gg---~~~~~~~~~~ll~~~g~~~~~~g~ 163 (287)
T 3pef_A 121 VSGSKKPAEDGTLIILAAG---DRNLYDEAMPGFEKMGKKIIHLGD 163 (287)
T ss_dssp EECCHHHHHHTCEEEEEEE---CHHHHHHHHHHHHHHEEEEEECSS
T ss_pred CcCCHHHHhcCCEEEEEeC---CHHHHHHHHHHHHHhCCCeEEeCC
Confidence 21111 1245556544 689999999999999999998865
No 44
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=98.08 E-value=5.8e-07 Score=72.83 Aligned_cols=112 Identities=15% Similarity=0.159 Sum_probs=80.2
Q ss_pred CceecCChhhhcCCCcEEEEeccCChHHHHHHHHH--HhhhCCCCcEEe--ecCCCCCHHHHhcccC-CCCcEEEeecCC
Q psy3942 40 RIKGSSKVEDSVSQSDLVIEAIVENMDIKHKLFTS--VDKIAPASAILA--SNTSSLSITEIASVTN-RKDKFVGLHFFN 114 (160)
Q Consensus 40 ~i~~~~~~~~al~~adlViEav~E~l~~K~~v~~~--l~~~~~~~~iia--snTS~l~i~~la~~~~-~p~r~ig~Hf~~ 114 (160)
.+..++++.++++++|+|+.|+|+...++.-+... +-..+.++++|. ||++...+.+|++.+. ++.++++.++++
T Consensus 73 g~~~~~~~~~~~~~~DvVi~av~~~~~~~~v~~~~~~~~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~~~~~v~~p~~g 152 (316)
T 2uyy_A 73 GARLGRTPAEVVSTCDITFACVSDPKAAKDLVLGPSGVLQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGRFLEAPVSG 152 (316)
T ss_dssp TCEECSCHHHHHHHCSEEEECCSSHHHHHHHHHSTTCGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEES
T ss_pred CCEEcCCHHHHHhcCCEEEEeCCCHHHHHHHHcCchhHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEEcCccC
Confidence 35566777677889999999999988887655432 224556666554 4444334567777663 567899988875
Q ss_pred CC---CCCceEEEecCCCCCHHHHHHHHHHHHHcCCeEEEecC
Q psy3942 115 PV---PMMKLLEVIRTNDTSDATYNAVTEWGKSIGKTTIVCKD 154 (160)
Q Consensus 115 P~---~~~~lVEvv~~~~T~~~~~~~~~~~~~~lgk~pv~v~d 154 (160)
++ ...++++++.| +++.++++..+++.+|+.++.+.+
T Consensus 153 ~~~~~~~g~~~~~~~g---~~~~~~~v~~ll~~~g~~~~~~~~ 192 (316)
T 2uyy_A 153 NQQLSNDGMLVILAAG---DRGLYEDCSSCFQAMGKTSFFLGE 192 (316)
T ss_dssp CHHHHHHTCEEEEEEE---CHHHHHHTHHHHHHHEEEEEECSS
T ss_pred ChhHHhhCCEEEEeCC---CHHHHHHHHHHHHHhcCCEEEeCC
Confidence 43 34567888776 578999999999999999888754
No 45
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=98.05 E-value=1.8e-06 Score=70.60 Aligned_cols=70 Identities=20% Similarity=0.362 Sum_probs=53.7
Q ss_pred hcCceecCChhhhcCCCcEEEEec--------------cCChHHHHHHHHHHhhhCCCCcEE--eecCCCCCHHHHhc-c
Q psy3942 38 LSRIKGSSKVEDSVSQSDLVIEAI--------------VENMDIKHKLFTSVDKIAPASAIL--ASNTSSLSITEIAS-V 100 (160)
Q Consensus 38 l~~i~~~~~~~~al~~adlViEav--------------~E~l~~K~~v~~~l~~~~~~~~ii--asnTS~l~i~~la~-~ 100 (160)
..+++.++|+ +++++||+||+++ .+|.++++++++++++.+ |++++ +||..+.. +.++. .
T Consensus 56 ~~~i~~t~d~-~a~~~aD~Vi~a~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~vi~~tNPv~~~-t~~~~~~ 132 (309)
T 1ur5_A 56 DVRVTGTNNY-ADTANSDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLS-PNAVIIMVNNPLDAM-TYLAAEV 132 (309)
T ss_dssp CCCEEEESCG-GGGTTCSEEEECCCC--------CHHHHHHHHHHHHHHHHHGGGC-TTCEEEECCSSHHHH-HHHHHHH
T ss_pred CeEEEECCCH-HHHCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEcCCchHHH-HHHHHHH
Confidence 3568888899 6899999999997 778899999999999998 77754 78865543 33332 2
Q ss_pred cC-CCCcEEEe
Q psy3942 101 TN-RKDKFVGL 110 (160)
Q Consensus 101 ~~-~p~r~ig~ 110 (160)
.. .|+|++|+
T Consensus 133 ~~~~~~rviG~ 143 (309)
T 1ur5_A 133 SGFPKERVIGQ 143 (309)
T ss_dssp HCCCGGGEEEC
T ss_pred cCCCHHHEEEC
Confidence 23 36799998
No 46
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=98.00 E-value=4.3e-07 Score=72.82 Aligned_cols=110 Identities=12% Similarity=0.130 Sum_probs=73.8
Q ss_pred CceecCChhhhcCCCcEEEEeccCChHHHHHHH--HHHhhhCCCCcEEeecCCCCCHH--HHhcccCCCCcEEEeecCCC
Q psy3942 40 RIKGSSKVEDSVSQSDLVIEAIVENMDIKHKLF--TSVDKIAPASAILASNTSSLSIT--EIASVTNRKDKFVGLHFFNP 115 (160)
Q Consensus 40 ~i~~~~~~~~al~~adlViEav~E~l~~K~~v~--~~l~~~~~~~~iiasnTS~l~i~--~la~~~~~p~r~ig~Hf~~P 115 (160)
.++.+++++++++++|+||.|+|.+..++.-++ ..+...+++++++...++..+.+ +++..+... |+||+..
T Consensus 44 g~~~~~~~~~~~~~advvi~~v~~~~~~~~v~~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~----g~~~~~~ 119 (287)
T 3pdu_A 44 GARQASSPAEVCAACDITIAMLADPAAAREVCFGANGVLEGIGGGRGYIDMSTVDDETSTAIGAAVTAR----GGRFLEA 119 (287)
T ss_dssp TCEECSCHHHHHHHCSEEEECCSSHHHHHHHHHSTTCGGGTCCTTCEEEECSCCCHHHHHHHHHHHHHT----TCEEEEC
T ss_pred CCeecCCHHHHHHcCCEEEEEcCCHHHHHHHHcCchhhhhcccCCCEEEECCCCCHHHHHHHHHHHHHc----CCEEEEC
Confidence 567788887888999999999999888886665 66777777777666443332222 444433211 3455443
Q ss_pred CCCC--------ceEEEecCCCCCHHHHHHHHHHHHHcCCeEEEecCcCc
Q psy3942 116 VPMM--------KLLEVIRTNDTSDATYNAVTEWGKSIGKTTIVCKDTPG 157 (160)
Q Consensus 116 ~~~~--------~lVEvv~~~~T~~~~~~~~~~~~~~lgk~pv~v~d~pG 157 (160)
|-.. .++-++. .++++++++..+++.+|+.++.+.+ +|
T Consensus 120 pv~g~~~~a~~g~l~~~~g---g~~~~~~~~~~ll~~~g~~~~~~g~-~g 165 (287)
T 3pdu_A 120 PVSGTKKPAEDGTLIILAA---GDQSLFTDAGPAFAALGKKCLHLGE-VG 165 (287)
T ss_dssp CEECCHHHHHHTCEEEEEE---ECHHHHHHTHHHHHHHEEEEEECSS-TT
T ss_pred CccCCHHHHhcCCEEEEEe---CCHHHHHHHHHHHHHhCCCEEEcCC-CC
Confidence 2111 2344443 3689999999999999999998865 44
No 47
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=97.97 E-value=4.9e-06 Score=64.29 Aligned_cols=107 Identities=17% Similarity=0.181 Sum_probs=74.2
Q ss_pred CceecCChhhhcCCCcEEEEeccCChHHHHHHHHHHhhhCCCCcEEeecCCCCCHHHHh----------cccCCCCcEEE
Q psy3942 40 RIKGSSKVEDSVSQSDLVIEAIVENMDIKHKLFTSVDKIAPASAILASNTSSLSITEIA----------SVTNRKDKFVG 109 (160)
Q Consensus 40 ~i~~~~~~~~al~~adlViEav~E~l~~K~~v~~~l~~~~~~~~iiasnTS~l~i~~la----------~~~~~p~r~ig 109 (160)
.++.+ +++++++++|+||.|++.. ..++++. +.... +++++.+.+++++++.+. +.+. ..++++
T Consensus 71 g~~~~-~~~~~~~~~DvVi~av~~~--~~~~v~~-l~~~~-~~~~vv~~s~g~~~~~l~~~~~~~~~l~~~l~-~~~vv~ 144 (215)
T 2vns_A 71 AAQVT-FQEEAVSSPEVIFVAVFRE--HYSSLCS-LSDQL-AGKILVDVSNPTEQEHLQHRESNAEYLASLFP-TCTVVK 144 (215)
T ss_dssp TSEEE-EHHHHTTSCSEEEECSCGG--GSGGGGG-GHHHH-TTCEEEECCCCCHHHHHHCSSCHHHHHHHHCT-TSEEEE
T ss_pred CCcee-cHHHHHhCCCEEEECCChH--HHHHHHH-HHHhc-CCCEEEEeCCCcccccccccccHHHHHHHHCC-CCeEEe
Confidence 35544 6667789999999999964 3455665 66666 789999999999887663 3332 236664
Q ss_pred eecCCCCCCCceEEEecCCCC-------CHHHHHHHHHHHHHcCCeEEEecC
Q psy3942 110 LHFFNPVPMMKLLEVIRTNDT-------SDATYNAVTEWGKSIGKTTIVCKD 154 (160)
Q Consensus 110 ~Hf~~P~~~~~lVEvv~~~~T-------~~~~~~~~~~~~~~lgk~pv~v~d 154 (160)
. +|+....++.+-+....+ +++..+.+..+++.+|+.++.+.+
T Consensus 145 ~--~n~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~v~~ll~~~G~~~~~~g~ 194 (215)
T 2vns_A 145 A--FNVISAWTLQAGPRDGNRQVPICGDQPEAKRAVSEMALAMGFMPVDMGS 194 (215)
T ss_dssp E--CTTBCHHHHHTCSCSSCCEEEEEESCHHHHHHHHHHHHHTTCEEEECCS
T ss_pred c--cccccHhHhcccccCCceeEEEecCCHHHHHHHHHHHHHcCCceEeecc
Confidence 2 365443333332222233 899999999999999999999864
No 48
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=97.96 E-value=4.4e-06 Score=66.62 Aligned_cols=108 Identities=11% Similarity=0.158 Sum_probs=77.2
Q ss_pred CceecCChhhhcCCCcEEEEeccCChHHHHHHHH--HHhhhCCCCcEEeecCCCCC--HHHHhcccCCCCcEEEeecCCC
Q psy3942 40 RIKGSSKVEDSVSQSDLVIEAIVENMDIKHKLFT--SVDKIAPASAILASNTSSLS--ITEIASVTNRKDKFVGLHFFNP 115 (160)
Q Consensus 40 ~i~~~~~~~~al~~adlViEav~E~l~~K~~v~~--~l~~~~~~~~iiasnTS~l~--i~~la~~~~~p~r~ig~Hf~~P 115 (160)
.+..+++++++++++|+|+.|+|.+..++.-+.. ++...++++++|.+.+++.+ ..+|+..+.. + |+||++.
T Consensus 45 g~~~~~~~~~~~~~~D~vi~~vp~~~~~~~v~~~~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~--~--g~~~~~~ 120 (295)
T 1yb4_A 45 GAVNVETARQVTEFADIIFIMVPDTPQVEDVLFGEHGCAKTSLQGKTIVDMSSISPIETKRFAQRVNE--M--GADYLDA 120 (295)
T ss_dssp TCBCCSSHHHHHHTCSEEEECCSSHHHHHHHHHSTTSSTTSCCTTEEEEECSCCCHHHHHHHHHHHHT--T--TEEEEEC
T ss_pred CCcccCCHHHHHhcCCEEEEECCCHHHHHHHHhCchhHhhcCCCCCEEEECCCCCHHHHHHHHHHHHH--c--CCeEEEc
Confidence 3566778877789999999999999887765543 67777888998886655533 4567766543 2 5666654
Q ss_pred CCC--------CceEEEecCCCCCHHHHHHHHHHHHHcCCeEEEecC
Q psy3942 116 VPM--------MKLLEVIRTNDTSDATYNAVTEWGKSIGKTTIVCKD 154 (160)
Q Consensus 116 ~~~--------~~lVEvv~~~~T~~~~~~~~~~~~~~lgk~pv~v~d 154 (160)
|-. ..++-++.+ +++.++++..+++.+|+.++.+.+
T Consensus 121 p~~~~~~~a~~g~~~~~~~~---~~~~~~~~~~ll~~~g~~~~~~~~ 164 (295)
T 1yb4_A 121 PVSGGEIGAREGTLSIMVGG---EQKVFDRVKPLFDILGKNITLVGG 164 (295)
T ss_dssp CEESHHHHHHHTCEEEEEES---CHHHHHHHHHHHHHHEEEEEEEES
T ss_pred cCCCCHHHHHcCCeEEEECC---CHHHHHHHHHHHHHhcCCEEEeCC
Confidence 321 134545544 789999999999999999888754
No 49
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=97.96 E-value=2.8e-06 Score=69.07 Aligned_cols=110 Identities=12% Similarity=0.067 Sum_probs=75.0
Q ss_pred CceecCChhhhcCCCcEEEEeccCChHHHHHHH--HHHhhhCCCCcEEeecCCCCCHH--HHhcccCCCCcEEEeecCCC
Q psy3942 40 RIKGSSKVEDSVSQSDLVIEAIVENMDIKHKLF--TSVDKIAPASAILASNTSSLSIT--EIASVTNRKDKFVGLHFFNP 115 (160)
Q Consensus 40 ~i~~~~~~~~al~~adlViEav~E~l~~K~~v~--~~l~~~~~~~~iiasnTS~l~i~--~la~~~~~p~r~ig~Hf~~P 115 (160)
.++.+++++++++++|+||.|+|.+..++.-+| ..+...+.++++|...++..+.+ +++..+... |+||+..
T Consensus 64 g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~----g~~~v~~ 139 (310)
T 3doj_A 64 GASVCESPAEVIKKCKYTIAMLSDPCAALSVVFDKGGVLEQICEGKGYIDMSTVDAETSLKINEAITGK----GGRFVEG 139 (310)
T ss_dssp TCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHT----TCEEEEC
T ss_pred CCeEcCCHHHHHHhCCEEEEEcCCHHHHHHHHhCchhhhhccCCCCEEEECCCCCHHHHHHHHHHHHHc----CCEEEeC
Confidence 467788887888999999999999888885554 66777777887776544333322 444433211 3444432
Q ss_pred CC--------CCceEEEecCCCCCHHHHHHHHHHHHHcCCeEEEecCcCc
Q psy3942 116 VP--------MMKLLEVIRTNDTSDATYNAVTEWGKSIGKTTIVCKDTPG 157 (160)
Q Consensus 116 ~~--------~~~lVEvv~~~~T~~~~~~~~~~~~~~lgk~pv~v~d~pG 157 (160)
|- ..+++-++.| ++++++++..+++.+|+.++.+.+ +|
T Consensus 140 pv~g~~~~a~~g~l~i~~gg---~~~~~~~~~~ll~~~g~~~~~~g~-~g 185 (310)
T 3doj_A 140 PVSGSKKPAEDGQLIILAAG---DKALFEESIPAFDVLGKRSFYLGQ-VG 185 (310)
T ss_dssp CEECCHHHHHHTCEEEEEEE---CHHHHHHHHHHHHHHEEEEEECSS-TT
T ss_pred CCCCChhHHhcCCeEEEEcC---CHHHHHHHHHHHHHhCCCEEEeCC-cC
Confidence 21 1234556654 589999999999999999999865 54
No 50
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=97.94 E-value=5.2e-06 Score=66.46 Aligned_cols=107 Identities=17% Similarity=0.237 Sum_probs=77.4
Q ss_pred CceecCChhhhcCCCcEEEEeccCChHHHHHHH--HHHhhhCCCCcEEeecCCCC--CHHHHhcccCCCCcEEEeecCC-
Q psy3942 40 RIKGSSKVEDSVSQSDLVIEAIVENMDIKHKLF--TSVDKIAPASAILASNTSSL--SITEIASVTNRKDKFVGLHFFN- 114 (160)
Q Consensus 40 ~i~~~~~~~~al~~adlViEav~E~l~~K~~v~--~~l~~~~~~~~iiasnTS~l--~i~~la~~~~~p~r~ig~Hf~~- 114 (160)
.+...+++++++.++|+|+.|+|....++.-+. .++...++++++|.+.+++. +..+|+..+... |+||++
T Consensus 47 g~~~~~~~~~~~~~~D~vi~~vp~~~~~~~v~~~~~~l~~~l~~~~~vv~~~~~~~~~~~~l~~~~~~~----g~~~~~~ 122 (301)
T 3cky_A 47 GAQACENNQKVAAASDIIFTSLPNAGIVETVMNGPGGVLSACKAGTVIVDMSSVSPSSTLKMAKVAAEK----GIDYVDA 122 (301)
T ss_dssp TCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCHHHHSCTTCEEEECCCCCHHHHHHHHHHHHHT----TCEEEEC
T ss_pred CCeecCCHHHHHhCCCEEEEECCCHHHHHHHHcCcchHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHc----CCeEEEc
Confidence 466677887778899999999999988887665 37778889999999988877 455777665432 334432
Q ss_pred CCCCC-------ceEEEecCCCCCHHHHHHHHHHHHHcCCeEEEec
Q psy3942 115 PVPMM-------KLLEVIRTNDTSDATYNAVTEWGKSIGKTTIVCK 153 (160)
Q Consensus 115 P~~~~-------~lVEvv~~~~T~~~~~~~~~~~~~~lgk~pv~v~ 153 (160)
|.... .+.-++.+ +++.++.+..+++.+|+.++.+.
T Consensus 123 p~~~~~~~a~~g~~~~~~~g---~~~~~~~v~~ll~~~g~~~~~~~ 165 (301)
T 3cky_A 123 PVSGGTKGAEAGTLTIMVGA---SEAVFEKIQPVLSVIGKDIYHVG 165 (301)
T ss_dssp CEESHHHHHHHTCEEEEEES---CHHHHHHHHHHHHHHEEEEEEEE
T ss_pred cCCCCHHHHHcCCeEEEECC---CHHHHHHHHHHHHHhcCCEEEeC
Confidence 22111 13444443 78999999999999999988774
No 51
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=97.93 E-value=4.8e-06 Score=68.21 Aligned_cols=66 Identities=21% Similarity=0.422 Sum_probs=52.6
Q ss_pred cCceecCChhhhcCCCcEEEEe--------------ccCChHHHHHHHHHHhhhCCCCc--EEeecCCCCCHHHHhccc-
Q psy3942 39 SRIKGSSKVEDSVSQSDLVIEA--------------IVENMDIKHKLFTSVDKIAPASA--ILASNTSSLSITEIASVT- 101 (160)
Q Consensus 39 ~~i~~~~~~~~al~~adlViEa--------------v~E~l~~K~~v~~~l~~~~~~~~--iiasnTS~l~i~~la~~~- 101 (160)
.+++.++|+ +++++||+||++ +.+|..+++++.+++++.+ |++ |++|| |+.-++..+
T Consensus 54 ~~i~~t~d~-~a~~~aD~Vi~~ag~~~k~G~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~tN----Pv~~~t~~~~ 127 (308)
T 2d4a_B 54 IRISGSNSY-EDMRGSDIVLVTAGIGRKPGMTREQLLEANANTMADLAEKIKAYA-KDAIVVITTN----PVDAMTYVMY 127 (308)
T ss_dssp CCEEEESCG-GGGTTCSEEEECCSCCCCSSCCTHHHHHHHHHHHHHHHHHHHHHC-TTCEEEECCS----SHHHHHHHHH
T ss_pred eEEEECCCH-HHhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEeCC----chHHHHHHHH
Confidence 457777888 689999999999 7888999999999999998 777 66677 666555443
Q ss_pred ---CC-CCcEEEe
Q psy3942 102 ---NR-KDKFVGL 110 (160)
Q Consensus 102 ---~~-p~r~ig~ 110 (160)
.. |+|++|+
T Consensus 128 k~~~~p~~rviG~ 140 (308)
T 2d4a_B 128 KKTGFPRERVIGF 140 (308)
T ss_dssp HHHCCCGGGEEEC
T ss_pred HhcCCChhhEEEe
Confidence 23 6799997
No 52
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=97.89 E-value=7.6e-06 Score=65.40 Aligned_cols=108 Identities=17% Similarity=0.259 Sum_probs=76.4
Q ss_pred CceecCChhhhcCCCcEEEEeccCChHHHHHHH--HHHhhhCCCCcEEeecCCCCC--HHHHhcccCCCCcEEEeecCCC
Q psy3942 40 RIKGSSKVEDSVSQSDLVIEAIVENMDIKHKLF--TSVDKIAPASAILASNTSSLS--ITEIASVTNRKDKFVGLHFFNP 115 (160)
Q Consensus 40 ~i~~~~~~~~al~~adlViEav~E~l~~K~~v~--~~l~~~~~~~~iiasnTS~l~--i~~la~~~~~p~r~ig~Hf~~P 115 (160)
.+..+++++++++++|+|+.|+|....++.-++ .++...++++++|.+.++..+ ..+|+..+... |+||+..
T Consensus 48 g~~~~~~~~~~~~~~D~vi~~v~~~~~~~~~~~~~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~----g~~~~~~ 123 (299)
T 1vpd_A 48 GAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGIIEGAKPGTVLIDMSSIAPLASREISDALKAK----GVEMLDA 123 (299)
T ss_dssp TCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHTT----TCEEEEC
T ss_pred CCeecCCHHHHHhCCCEEEEECCCHHHHHHHHhCcchHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHc----CCeEEEe
Confidence 466777887778899999999999888876655 577788889998876655544 24676655332 3455432
Q ss_pred CCCCc--------eEEEecCCCCCHHHHHHHHHHHHHcCCeEEEecC
Q psy3942 116 VPMMK--------LLEVIRTNDTSDATYNAVTEWGKSIGKTTIVCKD 154 (160)
Q Consensus 116 ~~~~~--------lVEvv~~~~T~~~~~~~~~~~~~~lgk~pv~v~d 154 (160)
+.++ -+.++.+. +++.++.+..+++.+|+.++.+.+
T Consensus 124 -pv~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ll~~~g~~~~~~~~ 167 (299)
T 1vpd_A 124 -PVSGGEPKAIDGTLSVMVGG--DKAIFDKYYDLMKAMAGSVVHTGD 167 (299)
T ss_dssp -CEESHHHHHHHTCEEEEEES--CHHHHHHHHHHHHTTEEEEEEEES
T ss_pred -cCCCCHhHHhcCCEEEEeCC--CHHHHHHHHHHHHHHcCCeEEeCC
Confidence 1211 14555543 789999999999999999888743
No 53
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=97.89 E-value=1.9e-05 Score=62.55 Aligned_cols=98 Identities=8% Similarity=0.073 Sum_probs=77.0
Q ss_pred hcCCCcEEEEeccCChHHHHHHHHHHhhhCCCCcEEeecCCCCCHHHHhcccCCCCcEEEeecCCCCCCCceEEEecCCC
Q psy3942 50 SVSQSDLVIEAIVENMDIKHKLFTSVDKIAPASAILASNTSSLSITEIASVTNRKDKFVGLHFFNPVPMMKLLEVIRTND 129 (160)
Q Consensus 50 al~~adlViEav~E~l~~K~~v~~~l~~~~~~~~iiasnTS~l~i~~la~~~~~p~r~ig~Hf~~P~~~~~lVEvv~~~~ 129 (160)
++++|| |=|+|.+ .+ .+++++|...+++++++...+++.+..-+.....++.+++|.|++.. ...++.+.
T Consensus 40 ~~~~aD--ilavP~~-ai-~~vl~~l~~~l~~g~ivvd~sgs~~~~vl~~~~~~g~~fvg~HPm~g-----~~~~i~a~- 109 (232)
T 3dfu_A 40 DIRDFE--LVVIDAH-GV-EGYVEKLSAFARRGQMFLHTSLTHGITVMDPLETSGGIVMSAHPIGQ-----DRWVASAL- 109 (232)
T ss_dssp GGGGCS--EEEECSS-CH-HHHHHHHHTTCCTTCEEEECCSSCCGGGGHHHHHTTCEEEEEEEEET-----TEEEEEES-
T ss_pred HhccCC--EEEEcHH-HH-HHHHHHHHHhcCCCCEEEEECCcCHHHHHHHHHhCCCcEEEeeeCCC-----CceeeeCC-
Confidence 478899 6789997 33 67889999989999999988877877766665566789999997643 24555443
Q ss_pred CCHHHHHHHHHHHHHcCCeEEEe--cCcCcc
Q psy3942 130 TSDATYNAVTEWGKSIGKTTIVC--KDTPGF 158 (160)
Q Consensus 130 T~~~~~~~~~~~~~~lgk~pv~v--~d~pGf 158 (160)
+++.++.+..|++.+|+.|+.+ .+.++|
T Consensus 110 -d~~a~~~l~~L~~~lG~~vv~~~~~~hd~~ 139 (232)
T 3dfu_A 110 -DELGETIVGLLVGELGGSIVEIADDKRAQL 139 (232)
T ss_dssp -SHHHHHHHHHHHHHTTCEECCCCGGGHHHH
T ss_pred -CHHHHHHHHHHHHHhCCEEEEeCHHHHhHH
Confidence 7889999999999999999998 345554
No 54
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=97.81 E-value=3.5e-05 Score=59.53 Aligned_cols=103 Identities=17% Similarity=0.195 Sum_probs=73.7
Q ss_pred cCChhhhcCCCcEEEEeccCChHHHHHHHHHHhhhCCCCcEEeecCCCC--------------CHHHHhcccCCCCcEEE
Q psy3942 44 SSKVEDSVSQSDLVIEAIVENMDIKHKLFTSVDKIAPASAILASNTSSL--------------SITEIASVTNRKDKFVG 109 (160)
Q Consensus 44 ~~~~~~al~~adlViEav~E~l~~K~~v~~~l~~~~~~~~iiasnTS~l--------------~i~~la~~~~~p~r~ig 109 (160)
.++. ++++++|+||.|+| .....+++.++.. . +++++.+.+.++ +...|++.+. ..+++.
T Consensus 73 ~~~~-~~~~~aDvVilavp--~~~~~~v~~~l~~-~-~~~ivi~~~~g~~~~~~~~~~~~~~~~~~~l~~~l~-~~~vv~ 146 (220)
T 4huj_A 73 AVEL-KDALQADVVILAVP--YDSIADIVTQVSD-W-GGQIVVDASNAIDFPAFKPRDLGGRLSTEIVSELVP-GAKVVK 146 (220)
T ss_dssp ECCH-HHHTTSSEEEEESC--GGGHHHHHTTCSC-C-TTCEEEECCCCBCTTTCCBCCCTTCCHHHHHHHHST-TCEEEE
T ss_pred cChH-HHHhcCCEEEEeCC--hHHHHHHHHHhhc-c-CCCEEEEcCCCCCcccccccccCCCcHHHHHHHHCC-CCCEEE
Confidence 3444 57899999999998 5677888888876 4 577888888777 4667777775 446666
Q ss_pred eecCCCCCCCc---------eEEEecCCCCCHHHHHHHHHHHHHcCCeEEEecC
Q psy3942 110 LHFFNPVPMMK---------LLEVIRTNDTSDATYNAVTEWGKSIGKTTIVCKD 154 (160)
Q Consensus 110 ~Hf~~P~~~~~---------lVEvv~~~~T~~~~~~~~~~~~~~lgk~pv~v~d 154 (160)
...+.|+.... ..-++. ..+++..+.+..+++.+|+.|+.+.+
T Consensus 147 ~~~~~~~~v~~~g~~~~~~~~~v~~~--g~~~~~~~~v~~l~~~~G~~~~~~G~ 198 (220)
T 4huj_A 147 AFNTLPAAVLAADPDKGTGSRVLFLS--GNHSDANRQVAELISSLGFAPVDLGT 198 (220)
T ss_dssp ESCSSCHHHHTSCSBCSSCEEEEEEE--ESCHHHHHHHHHHHHHTTCEEEECCS
T ss_pred CCCCCCHHHhhhCcccCCCCeeEEEe--CCCHHHHHHHHHHHHHhCCCeEeeCC
Confidence 54333333221 223333 45699999999999999999998754
No 55
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=97.81 E-value=0.00012 Score=59.77 Aligned_cols=105 Identities=19% Similarity=0.172 Sum_probs=73.7
Q ss_pred ChhhhcCCCcEEEEeccCChHHHHHHHHHHhhhCCCCcEEeecCCCCCHH--HHhcccC-CCCcEEEeecCCCCC--CCc
Q psy3942 46 KVEDSVSQSDLVIEAIVENMDIKHKLFTSVDKIAPASAILASNTSSLSIT--EIASVTN-RKDKFVGLHFFNPVP--MMK 120 (160)
Q Consensus 46 ~~~~al~~adlViEav~E~l~~K~~v~~~l~~~~~~~~iiasnTS~l~i~--~la~~~~-~p~r~ig~Hf~~P~~--~~~ 120 (160)
+++++++++|+||.|+|.+...+ .+.++...++++++|.+.++..|.+ +++..+. +.-+++....+.|++ ...
T Consensus 80 s~~e~~~~aDvVi~avp~~~~~~--~~~~i~~~l~~~~ivv~~st~~p~~~~~~~~~l~~~g~~~~d~pv~g~~~a~~g~ 157 (317)
T 4ezb_A 80 DDVAGIACADVVLSLVVGAATKA--VAASAAPHLSDEAVFIDLNSVGPDTKALAAGAIATGKGSFVEGAVMARVPPYAEK 157 (317)
T ss_dssp SSGGGGGGCSEEEECCCGGGHHH--HHHHHGGGCCTTCEEEECCSCCHHHHHHHHHHHHTSSCEEEEEEECSCSTTTGGG
T ss_pred CHHHHHhcCCEEEEecCCHHHHH--HHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEeccCCCCchhhcCC
Confidence 66678899999999999998776 3588888888888887665444333 4444442 223455443344433 446
Q ss_pred eEEEecCCCCCHHHHHHHHHHHHHcCCeEEEecCcCc
Q psy3942 121 LLEVIRTNDTSDATYNAVTEWGKSIGKTTIVCKDTPG 157 (160)
Q Consensus 121 lVEvv~~~~T~~~~~~~~~~~~~~lgk~pv~v~d~pG 157 (160)
+..++.|+.+ +++..+++.+|+.++.+.+.+|
T Consensus 158 l~i~vgg~~~-----~~~~~ll~~~g~~v~~~g~~~g 189 (317)
T 4ezb_A 158 VPILVAGRRA-----VEVAERLNALGMNLEAVGETPG 189 (317)
T ss_dssp SEEEEESTTH-----HHHHHHHHTTTCEEEEEESSTT
T ss_pred EEEEEeCChH-----HHHHHHHHHhCCCeEEeCCCcC
Confidence 7777777654 7888999999999998876555
No 56
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=97.81 E-value=1.5e-05 Score=67.80 Aligned_cols=113 Identities=13% Similarity=0.129 Sum_probs=75.6
Q ss_pred hcCceecCChhhhcCCCcEEEEeccCChH---------HHHHHHHHHhhhCCC---CcEEeecCCCCCHH----HHhccc
Q psy3942 38 LSRIKGSSKVEDSVSQSDLVIEAIVENMD---------IKHKLFTSVDKIAPA---SAILASNTSSLSIT----EIASVT 101 (160)
Q Consensus 38 l~~i~~~~~~~~al~~adlViEav~E~l~---------~K~~v~~~l~~~~~~---~~iiasnTS~l~i~----~la~~~ 101 (160)
.+++++++++++++++||+||.|+|.... ++ ++++++...+++ +++|.. .|+.++. .+...+
T Consensus 61 ~g~l~~t~~~~~~~~~aDvviiaVptp~~~~~~~dl~~v~-~v~~~i~~~l~~~~~~~iVV~-~Stv~~g~t~~~l~~~l 138 (436)
T 1mv8_A 61 TGRLSGTTDFKKAVLDSDVSFICVGTPSKKNGDLDLGYIE-TVCREIGFAIREKSERHTVVV-RSTVLPGTVNNVVIPLI 138 (436)
T ss_dssp TTCEEEESCHHHHHHTCSEEEECCCCCBCTTSSBCCHHHH-HHHHHHHHHHTTCCSCCEEEE-CSCCCTTHHHHTHHHHH
T ss_pred cCceEEeCCHHHHhccCCEEEEEcCCCcccCCCcchHHHH-HHHHHHHHHhcccCCCcEEEE-eCCcCCCchHHHHHHHH
Confidence 45789999997789999999999998775 55 467889888888 887763 3444432 233332
Q ss_pred CC--CCcE-EEe-ecCCCCCCCceE---------EEecCCCCCHHHHHHHHHHHHHcCCeEEEecC
Q psy3942 102 NR--KDKF-VGL-HFFNPVPMMKLL---------EVIRTNDTSDATYNAVTEWGKSIGKTTIVCKD 154 (160)
Q Consensus 102 ~~--p~r~-ig~-Hf~~P~~~~~lV---------Evv~~~~T~~~~~~~~~~~~~~lgk~pv~v~d 154 (160)
.. ..++ +.+ -+++|....+-. .|+.|. +++++.+.+.++++.+|+ |+.+.|
T Consensus 139 ~~~~g~~~~~~~~v~~~Pe~~~~G~~~~~~~~~~~iv~G~-~~~~~~~~~~~l~~~~~~-~v~~~~ 202 (436)
T 1mv8_A 139 EDCSGKKAGVDFGVGTNPEFLRESTAIKDYDFPPMTVIGE-LDKQTGDLLEEIYRELDA-PIIRKT 202 (436)
T ss_dssp HHHHSCCBTTTBEEEECCCCCCTTSHHHHHHSCSCEEEEE-SSHHHHHHHHHHHTTSSS-CEEEEE
T ss_pred HHhcCcccCCcEEEEECcccccccccchhccCCCEEEEEc-CCHHHHHHHHHHHhccCC-CEEcCC
Confidence 21 1111 011 135777766543 456555 478999999999999998 555543
No 57
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=97.80 E-value=1.5e-05 Score=65.10 Aligned_cols=107 Identities=9% Similarity=0.093 Sum_probs=70.5
Q ss_pred CceecCChhhhcCCCcEEEEeccCChHHHHHHHH-HHhhhCCCCcEEe-ecCCCCCHH-HHhcccCCCCcEEEeecCCCC
Q psy3942 40 RIKGSSKVEDSVSQSDLVIEAIVENMDIKHKLFT-SVDKIAPASAILA-SNTSSLSIT-EIASVTNRKDKFVGLHFFNPV 116 (160)
Q Consensus 40 ~i~~~~~~~~al~~adlViEav~E~l~~K~~v~~-~l~~~~~~~~iia-snTS~l~i~-~la~~~~~p~r~ig~Hf~~P~ 116 (160)
.++.+++++++++++|+||.|+|++..++.-++. .+-..+.++++|. ++|+....+ +++..+... |+||+..|
T Consensus 74 g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~~~~~~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~----g~~~~~~p 149 (320)
T 4dll_A 74 GATIHEQARAAARDADIVVSMLENGAVVQDVLFAQGVAAAMKPGSLFLDMASITPREARDHAARLGAL----GIAHLDTP 149 (320)
T ss_dssp TCEEESSHHHHHTTCSEEEECCSSHHHHHHHHTTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHT----TCEEEECC
T ss_pred CCEeeCCHHHHHhcCCEEEEECCCHHHHHHHHcchhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHc----CCEEEeCC
Confidence 4677888888899999999999998888766552 3444455555544 444443333 444443211 44554432
Q ss_pred C--------CCceEEEecCCCCCHHHHHHHHHHHHHcCCeEEEecC
Q psy3942 117 P--------MMKLLEVIRTNDTSDATYNAVTEWGKSIGKTTIVCKD 154 (160)
Q Consensus 117 ~--------~~~lVEvv~~~~T~~~~~~~~~~~~~~lgk~pv~v~d 154 (160)
- ..++..++.| ++++++++..+++.+ +.++.+.+
T Consensus 150 v~g~~~~a~~g~l~i~~gg---~~~~~~~~~~ll~~~-~~~~~~g~ 191 (320)
T 4dll_A 150 VSGGTVGAEQGTLVIMAGG---KPADFERSLPLLKVF-GRATHVGP 191 (320)
T ss_dssp EECHHHHHHHTCEEEEEES---CHHHHHHHHHHHHHH-EEEEEEES
T ss_pred CcCCHhHHhcCCeeEEeCC---CHHHHHHHHHHHHhc-CCEEEeCC
Confidence 1 2245666654 689999999999999 88888865
No 58
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=97.61 E-value=4.8e-05 Score=63.42 Aligned_cols=113 Identities=12% Similarity=0.058 Sum_probs=81.4
Q ss_pred cCceecCChhhhcCCCcEEEEeccCChHHHHHHHHHHhhhCCCCcEEeecCCCCCHH------HHhcccCCCCcEEEeec
Q psy3942 39 SRIKGSSKVEDSVSQSDLVIEAIVENMDIKHKLFTSVDKIAPASAILASNTSSLSIT------EIASVTNRKDKFVGLHF 112 (160)
Q Consensus 39 ~~i~~~~~~~~al~~adlViEav~E~l~~K~~v~~~l~~~~~~~~iiasnTS~l~i~------~la~~~~~p~r~ig~Hf 112 (160)
.++++++|++++++++|+||.|+|.. ..+++++++...++++++|.|.+.++... .+.+.+.. .++. -.
T Consensus 85 ~~i~~t~d~~ea~~~aDvVilaVp~~--~~~~vl~~i~~~l~~~~ivvs~~kGi~~~t~~~se~i~~~l~~-~~~~--vl 159 (356)
T 3k96_A 85 ETLKAYCDLKASLEGVTDILIVVPSF--AFHEVITRMKPLIDAKTRIAWGTKGLAKGSRLLHEVVATELGQ-VPMA--VI 159 (356)
T ss_dssp TTEEEESCHHHHHTTCCEEEECCCHH--HHHHHHHHHGGGCCTTCEEEECCCSCBTTTBCHHHHHHHHHCS-CCEE--EE
T ss_pred CCeEEECCHHHHHhcCCEEEECCCHH--HHHHHHHHHHHhcCCCCEEEEEeCCCCcCccCHHHHHHHHcCC-CCEE--EE
Confidence 45788899977899999999999975 78899999999999999999998888765 23333331 1222 23
Q ss_pred CCCCCCC-----ceEEEecCCCCCHHHHHHHHHHHHHcCCeEEEecCcCc
Q psy3942 113 FNPVPMM-----KLLEVIRTNDTSDATYNAVTEWGKSIGKTTIVCKDTPG 157 (160)
Q Consensus 113 ~~P~~~~-----~lVEvv~~~~T~~~~~~~~~~~~~~lgk~pv~v~d~pG 157 (160)
..|.+.. ..-.++-+ ..+++..+.+..++...|..+.+..|..|
T Consensus 160 sgP~~a~ev~~g~pt~~via-~~~~~~~~~v~~lf~~~~~rv~~~~Di~g 208 (356)
T 3k96_A 160 SGPSLATEVAANLPTAVSLA-SNNSQFSKDLIERLHGQRFRVYKNDDMIG 208 (356)
T ss_dssp ESSCCHHHHHTTCCEEEEEE-ESCHHHHHHHHHHHCCSSEEEEEESCHHH
T ss_pred ECccHHHHHHcCCCeEEEEe-cCCHHHHHHHHHHhCCCCeeEEEeCCHHH
Confidence 4554421 11122222 35788999999999999998888887654
No 59
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=97.60 E-value=9.9e-06 Score=69.63 Aligned_cols=115 Identities=11% Similarity=0.160 Sum_probs=79.2
Q ss_pred cCceecCChhhhcCCCcEEEEeccCChHHH-------------HHHHHHHhhhCCCCcEEeecCCCCCHH---HHhcccC
Q psy3942 39 SRIKGSSKVEDSVSQSDLVIEAIVENMDIK-------------HKLFTSVDKIAPASAILASNTSSLSIT---EIASVTN 102 (160)
Q Consensus 39 ~~i~~~~~~~~al~~adlViEav~E~l~~K-------------~~v~~~l~~~~~~~~iiasnTS~l~i~---~la~~~~ 102 (160)
.++++++++++++++||+||.|+|.....+ .++.+.+...++++++| .++|++++. +++..+.
T Consensus 68 ~~~~~t~~~~e~~~~aDvViiaVptp~~~~~v~~~~~~dl~~v~~~~~~i~~~l~~g~iV-V~~STv~~g~~~~l~~~l~ 146 (467)
T 2q3e_A 68 KNLFFSTNIDDAIKEADLVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIV-TEKSTVPVRAAESIRRIFD 146 (467)
T ss_dssp TTEEEESCHHHHHHHCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHTCCSEEEE-EECSCCCTTHHHHHHHHHH
T ss_pred CCEEEECCHHHHHhcCCEEEEEcCCchhhccccccCCCcHHHHHHHHHHHHhhCCCCCEE-EECCcCCchHHHHHHHHHH
Confidence 468888998778899999999998776543 57788888888888877 444455543 3443332
Q ss_pred CCC-cEEE-eecCCCCCCCceEE---------Ee-cCCC--CCHHHHHHHHHHHHHc-CCeEEEecC
Q psy3942 103 RKD-KFVG-LHFFNPVPMMKLLE---------VI-RTND--TSDATYNAVTEWGKSI-GKTTIVCKD 154 (160)
Q Consensus 103 ~p~-r~ig-~Hf~~P~~~~~lVE---------vv-~~~~--T~~~~~~~~~~~~~~l-gk~pv~v~d 154 (160)
... ..+. .-+++|....+-.. |+ .++. +++++.+.+..+++.+ |+.++.+.+
T Consensus 147 ~~~~~~~d~~V~~~Pe~~~~G~~~~d~~~~~rivvGg~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~ 213 (467)
T 2q3e_A 147 ANTKPNLNLQVLSNPEFLAEGTAIKDLKNPDRVLIGGDETPEGQRAVQALCAVYEHWVPREKILTTN 213 (467)
T ss_dssp HTCCTTCEEEEEECCCCCCTTSHHHHHHSCSCEEEECCSSHHHHHHHHHHHHHHTTTSCGGGEEEEC
T ss_pred HhCCCCCCeEEEeCHHHhhcccchhhccCCCEEEECCCCCCCCHHHHHHHHHHHHHhccCCeEEecC
Confidence 211 1111 11577887776654 44 4444 4889999999999998 888888754
No 60
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=97.55 E-value=0.00013 Score=55.96 Aligned_cols=99 Identities=10% Similarity=0.020 Sum_probs=70.2
Q ss_pred hcCCCcEEEEeccCChHHHHHHHHHHhhhCCCCcEEeecCCCCC---------------HHHHhcccCCCCcEEE-eecC
Q psy3942 50 SVSQSDLVIEAIVENMDIKHKLFTSVDKIAPASAILASNTSSLS---------------ITEIASVTNRKDKFVG-LHFF 113 (160)
Q Consensus 50 al~~adlViEav~E~l~~K~~v~~~l~~~~~~~~iiasnTS~l~---------------i~~la~~~~~p~r~ig-~Hf~ 113 (160)
+++++|+|+.|++ ...-++++.++...++ ++++.+.+++++ ...+++.+. ..++++ +|+.
T Consensus 54 ~~~~aD~vi~av~--~~~~~~v~~~l~~~~~-~~~vi~~~~g~~~~~~~~l~~~~~~~~~~~l~~~l~-~~~vv~~~~~~ 129 (209)
T 2raf_A 54 ATTLGEIVIMAVP--YPALAALAKQYATQLK-GKIVVDITNPLNFDTWDDLVVPADSSAAQELQQQLP-DSQVLKAFNTT 129 (209)
T ss_dssp CSSCCSEEEECSC--HHHHHHHHHHTHHHHT-TSEEEECCCCBCTTTSSSBSSCTTCCHHHHHHHHCT-TSEEEECSTTS
T ss_pred HhccCCEEEEcCC--cHHHHHHHHHHHHhcC-CCEEEEECCCCCccccccccCCCCCcHHHHHHHHCC-CCcEEEeeecc
Confidence 6789999999999 4445688999988777 899988888776 345555554 357887 6654
Q ss_pred C-CCCC-------CceEEEecCCCCCHHHHHHHHHHHHHcCCeEEEecC
Q psy3942 114 N-PVPM-------MKLLEVIRTNDTSDATYNAVTEWGKSIGKTTIVCKD 154 (160)
Q Consensus 114 ~-P~~~-------~~lVEvv~~~~T~~~~~~~~~~~~~~lgk~pv~v~d 154 (160)
. |... .+..-++. .++++..+.+.++++.+|..++.+.|
T Consensus 130 ~~p~~~~~~~~g~~~~~~~~~--g~~~~~~~~v~~ll~~~G~~~~~~~~ 176 (209)
T 2raf_A 130 FAATLQSGQVNGKEPTTVLVA--GNDDSAKQRFTRALADSPLEVKDAGK 176 (209)
T ss_dssp CHHHHHHSEETTTEECEEEEE--ESCHHHHHHHHHHTTTSSCEEEEEES
T ss_pred cHhhccccccCCCCCceeEEc--CCCHHHHHHHHHHHHHcCCceEeCCC
Confidence 3 2111 12222232 34688999999999999999988865
No 61
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=97.53 E-value=3.8e-05 Score=62.24 Aligned_cols=109 Identities=11% Similarity=0.087 Sum_probs=70.9
Q ss_pred CceecCChhhhcCCCcEEEEeccCChHHHHHHHH--HHhhhCCCCcEEeecCCCCCHH-HHhcccC-CCCcEEEeecCCC
Q psy3942 40 RIKGSSKVEDSVSQSDLVIEAIVENMDIKHKLFT--SVDKIAPASAILASNTSSLSIT-EIASVTN-RKDKFVGLHFFNP 115 (160)
Q Consensus 40 ~i~~~~~~~~al~~adlViEav~E~l~~K~~v~~--~l~~~~~~~~iiasnTS~l~i~-~la~~~~-~p~r~ig~Hf~~P 115 (160)
.+..+++++++++++|+||.|+|.+..++.-+ . .+....+...++-++|++...+ +++..+. +.-+++....+.+
T Consensus 52 g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~-~~~~l~~~~~g~ivid~st~~~~~~~~l~~~~~~~g~~~vdapv~g~ 130 (306)
T 3l6d_A 52 GAHLCESVKAALSASPATIFVLLDNHATHEVL-GMPGVARALAHRTIVDYTTNAQDEGLALQGLVNQAGGHYVKGMIVAY 130 (306)
T ss_dssp TCEECSSHHHHHHHSSEEEECCSSHHHHHHHH-TSTTHHHHTTTCEEEECCCCCTTHHHHHHHHHHHTTCEEEEEEEESC
T ss_pred CCeecCCHHHHHhcCCEEEEEeCCHHHHHHHh-cccchhhccCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEecccccC
Confidence 45667888778899999999999988777544 4 5666655555555555554443 4444432 2335555433332
Q ss_pred CCC---CceEEEecCCCCCHHHHHHHHHHHHHcCCeEEEe
Q psy3942 116 VPM---MKLLEVIRTNDTSDATYNAVTEWGKSIGKTTIVC 152 (160)
Q Consensus 116 ~~~---~~lVEvv~~~~T~~~~~~~~~~~~~~lgk~pv~v 152 (160)
++. ..++-++.| ++++++++..+++.+|+.++.+
T Consensus 131 ~~~~~~~~~~i~~gg---~~~~~~~~~~ll~~lg~~~~~~ 167 (306)
T 3l6d_A 131 PRNVGHRESHSIHTG---DREAFEQHRALLEGLAGHTVFL 167 (306)
T ss_dssp GGGTTCTTCEEEEEE---CHHHHHHHHHHHHTTCSEEEEC
T ss_pred cccccCCceEEEEcC---CHHHHHHHHHHHHHhcCCEEEe
Confidence 211 134434433 6999999999999998888888
No 62
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=97.50 E-value=1.5e-05 Score=63.66 Aligned_cols=107 Identities=13% Similarity=0.203 Sum_probs=74.5
Q ss_pred CceecCChhhhcCCCcEEEEeccCChHHHHHHHHHHh---hhCCCCcEEeecCCCCCHHHHhc---ccCCCCcEEEeecC
Q psy3942 40 RIKGSSKVEDSVSQSDLVIEAIVENMDIKHKLFTSVD---KIAPASAILASNTSSLSITEIAS---VTNRKDKFVGLHFF 113 (160)
Q Consensus 40 ~i~~~~~~~~al~~adlViEav~E~l~~K~~v~~~l~---~~~~~~~iiasnTS~l~i~~la~---~~~~p~r~ig~Hf~ 113 (160)
.++.+++++++++++|+|+.|+|....++. ++.+++ ..+++++++.+ +|++++..+.. .... + |.||+
T Consensus 43 g~~~~~~~~~~~~~~Dvvi~~vp~~~~~~~-v~~~~~~~~~~l~~~~~vv~-~s~~~~~~~~~~~~~~~~--~--g~~~~ 116 (296)
T 2gf2_A 43 GEQVVSSPADVAEKADRIITMLPTSINAIE-AYSGANGILKKVKKGSLLID-SSTIDPAVSKELAKEVEK--M--GAVFM 116 (296)
T ss_dssp TCEECSSHHHHHHHCSEEEECCSSHHHHHH-HHHSTTSGGGTCCTTCEEEE-CSCCCHHHHHHHHHHHHH--T--TCEEE
T ss_pred CCeecCCHHHHHhcCCEEEEeCCCHHHHHH-HHhCchhHHhcCCCCCEEEE-CCCCCHHHHHHHHHHHHH--c--CCEEE
Confidence 466777887778899999999998888775 444433 35678999998 88998875443 2221 2 44555
Q ss_pred CCCCCC-------ceEEEecCCCCCHHHHHHHHHHHHHcCCeEEEecC
Q psy3942 114 NPVPMM-------KLLEVIRTNDTSDATYNAVTEWGKSIGKTTIVCKD 154 (160)
Q Consensus 114 ~P~~~~-------~lVEvv~~~~T~~~~~~~~~~~~~~lgk~pv~v~d 154 (160)
+.|-.. +-..++.+ .+++.++++..+++.+|+.++.+.+
T Consensus 117 ~~p~~~g~~~a~~~~~~~~~~--~~~~~~~~v~~l~~~~g~~~~~~~~ 162 (296)
T 2gf2_A 117 DAPVSGGVGAARSGNLTFMVG--GVEDEFAAAQELLGCMGSNVVYCGA 162 (296)
T ss_dssp ECCEESHHHHHHHTCEEEEEE--SCGGGHHHHHHHHTTTEEEEEEEES
T ss_pred EcCCCCChhHHhcCcEEEEeC--CCHHHHHHHHHHHHHHcCCeEEeCC
Confidence 532111 22445555 4688899999999999999887754
No 63
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=97.46 E-value=0.00039 Score=56.69 Aligned_cols=110 Identities=12% Similarity=0.057 Sum_probs=74.9
Q ss_pred CceecCChhhhcCCCcEEEEeccCChHHHHHHHHHHhhhCCCCcEEeecCCCCCH--------HHH-hcccCCCCcEEEe
Q psy3942 40 RIKGSSKVEDSVSQSDLVIEAIVENMDIKHKLFTSVDKIAPASAILASNTSSLSI--------TEI-ASVTNRKDKFVGL 110 (160)
Q Consensus 40 ~i~~~~~~~~al~~adlViEav~E~l~~K~~v~~~l~~~~~~~~iiasnTS~l~i--------~~l-a~~~~~p~r~ig~ 110 (160)
++..+++++++++++|+||.|+|. ...++++++|...+++++++.|.++++++ .++ ...+.++ + .
T Consensus 77 ~~~~~~~~~~~~~~aD~Vilav~~--~~~~~v~~~i~~~l~~~~ivv~~~~Gi~~~~~~~~~l~~~l~~~~~~~--~--~ 150 (354)
T 1x0v_A 77 NVVAVPDVVQAAEDADILIFVVPH--QFIGKICDQLKGHLKANATGISLIKGVDEGPNGLKLISEVIGERLGIP--M--S 150 (354)
T ss_dssp TEEEESSHHHHHTTCSEEEECCCG--GGHHHHHHHHTTCSCTTCEEEECCCCBCSSSSSCCBHHHHHHHHHTCC--E--E
T ss_pred CeEEEcCHHHHHcCCCEEEEeCCH--HHHHHHHHHHHhhCCCCCEEEEECCccCCCCCccccHHHHHHHHcCCC--E--E
Confidence 467778887778999999999997 46889999999999999999999988864 222 2222222 1 1
Q ss_pred ecCCCCCC-----CceEEEecCCCCCHHHHHHHHHHHHHcCCeEEEecCcC
Q psy3942 111 HFFNPVPM-----MKLLEVIRTNDTSDATYNAVTEWGKSIGKTTIVCKDTP 156 (160)
Q Consensus 111 Hf~~P~~~-----~~lVEvv~~~~T~~~~~~~~~~~~~~lgk~pv~v~d~p 156 (160)
....|... .....++.+ ..+++..+.+..++...|..+....|..
T Consensus 151 v~~gp~~a~~v~~g~~~~~~~~-~~~~~~~~~v~~ll~~~g~~~~~~~di~ 200 (354)
T 1x0v_A 151 VLMGANIASEVADEKFCETTIG-CKDPAQGQLLKELMQTPNFRITVVQEVD 200 (354)
T ss_dssp EEECSCCHHHHHTTCCEEEEEE-CSSHHHHHHHHHHHCBTTEEEEEESCHH
T ss_pred EEECCCcHHHHHhcCCceEEEE-ECCHHHHHHHHHHhCCCCEEEEEcCCch
Confidence 22334321 111122222 3467888999999999999877776653
No 64
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=97.41 E-value=0.00021 Score=55.96 Aligned_cols=103 Identities=16% Similarity=0.203 Sum_probs=66.5
Q ss_pred CChhhhcCCCcEEEEeccCChHHHHHHHHHHhhhCCCCcEEeecCCCC-CHHHHhcccCCCCcEEEeecCCCCCC--Cce
Q psy3942 45 SKVEDSVSQSDLVIEAIVENMDIKHKLFTSVDKIAPASAILASNTSSL-SITEIASVTNRKDKFVGLHFFNPVPM--MKL 121 (160)
Q Consensus 45 ~~~~~al~~adlViEav~E~l~~K~~v~~~l~~~~~~~~iiasnTS~l-~i~~la~~~~~p~r~ig~Hf~~P~~~--~~l 121 (160)
++++++++++|+||.|+|.+...+. + .++...+++ .++-.+|.+. ...+|++.+..+. +++.+++.++.. ...
T Consensus 48 ~~~~~~~~~aDvvi~~v~~~~~~~~-~-~~~~~~~~~-~vi~~s~~~~~~~~~l~~~~~~~g-~~~~~v~~~~~~~~~g~ 123 (264)
T 1i36_A 48 ETSEEDVYSCPVVISAVTPGVALGA-A-RRAGRHVRG-IYVDINNISPETVRMASSLIEKGG-FVDAAIMGSVRRKGADI 123 (264)
T ss_dssp ECCHHHHHTSSEEEECSCGGGHHHH-H-HHHHTTCCS-EEEECSCCCHHHHHHHHHHCSSSE-EEEEEECSCHHHHGGGC
T ss_pred CCHHHHHhcCCEEEEECCCHHHHHH-H-HHHHHhcCc-EEEEccCCCHHHHHHHHHHHhhCC-eeeeeeeCCccccccCC
Confidence 5565678999999999999876665 3 566666666 4444433322 2346777776655 778887776541 122
Q ss_pred EEEecCCCCCHHHHHHHHHHHHHcCCeEEEecCcCc
Q psy3942 122 LEVIRTNDTSDATYNAVTEWGKSIGKTTIVCKDTPG 157 (160)
Q Consensus 122 VEvv~~~~T~~~~~~~~~~~~~~lgk~pv~v~d~pG 157 (160)
.-++.|... +++.. ++.+|+.++.+.+.+|
T Consensus 124 ~~~~~g~~~-----~~~~~-l~~~g~~~~~~~~~~g 153 (264)
T 1i36_A 124 RIIASGRDA-----EEFMK-LNRYGLNIEVRGREPG 153 (264)
T ss_dssp EEEEESTTH-----HHHHG-GGGGTCEEEECSSSTT
T ss_pred eEEecCCcH-----HHhhh-HHHcCCeeEECCCCcC
Confidence 334444332 66777 8999999888865455
No 65
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=97.34 E-value=9.6e-05 Score=60.47 Aligned_cols=60 Identities=20% Similarity=0.334 Sum_probs=45.4
Q ss_pred CChhhhcCCCcEEEEe--------------ccCChHHHHHHHHHHhhhCCCCc--EEeecCCCCCHHHHhccc----CC-
Q psy3942 45 SKVEDSVSQSDLVIEA--------------IVENMDIKHKLFTSVDKIAPASA--ILASNTSSLSITEIASVT----NR- 103 (160)
Q Consensus 45 ~~~~~al~~adlViEa--------------v~E~l~~K~~v~~~l~~~~~~~~--iiasnTS~l~i~~la~~~----~~- 103 (160)
+++ +++++||+||.| +.++..+|+++.+++++.+ |++ +++|| |+.-++..+ ..
T Consensus 67 ~~~-~al~~aDvViia~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~~iv~tN----Pv~~~~~~~~~~s~~p 140 (316)
T 1ldn_A 67 GDY-DDCRDADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASG-FQGLFLVATN----PVDILTYATWKFSGLP 140 (316)
T ss_dssp CCG-GGTTTCSEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHT-CCSEEEECSS----SHHHHHHHHHHHHTCC
T ss_pred CcH-HHhCCCCEEEEcCCCCCCCCCCHHHHHHcChHHHHHHHHHHHHHC-CCCEEEEeCC----chHHHHHHHHHHhCCC
Confidence 455 689999999999 5677899999999999998 566 55566 665555433 23
Q ss_pred CCcEEEe
Q psy3942 104 KDKFVGL 110 (160)
Q Consensus 104 p~r~ig~ 110 (160)
|.|++|+
T Consensus 141 ~~rviG~ 147 (316)
T 1ldn_A 141 HERVIGS 147 (316)
T ss_dssp GGGEEEC
T ss_pred HHHEEec
Confidence 5688886
No 66
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=97.32 E-value=7.1e-05 Score=62.20 Aligned_cols=95 Identities=15% Similarity=0.137 Sum_probs=67.6
Q ss_pred CceecCChhhhcCCCcEEEEeccCChHHHHHHHHHHhhhCCCCcEEeecCCCC---CHHHHhcccCCCCcE--EEeecCC
Q psy3942 40 RIKGSSKVEDSVSQSDLVIEAIVENMDIKHKLFTSVDKIAPASAILASNTSSL---SITEIASVTNRKDKF--VGLHFFN 114 (160)
Q Consensus 40 ~i~~~~~~~~al~~adlViEav~E~l~~K~~v~~~l~~~~~~~~iiasnTS~l---~i~~la~~~~~p~r~--ig~Hf~~ 114 (160)
.+.+++++++.++++|+|+.++|.+.+.+.-+.+++-+.++++++|. |+|+. ...+|...+.. .++ .|+++|.
T Consensus 207 g~~~~~~l~ell~~aDvVil~vp~~~~t~~li~~~~l~~mk~gaili-n~srg~~vd~~aL~~aL~~-~~i~gaglDv~~ 284 (348)
T 2w2k_A 207 GAERVDSLEELARRSDCVSVSVPYMKLTHHLIDEAFFAAMKPGSRIV-NTARGPVISQDALIAALKS-GKLLSAGLDVHE 284 (348)
T ss_dssp TCEECSSHHHHHHHCSEEEECCCCSGGGTTCBCHHHHHHSCTTEEEE-ECSCGGGBCHHHHHHHHHT-TSEEEEEESSCT
T ss_pred CcEEeCCHHHHhccCCEEEEeCCCChHHHHHhhHHHHhcCCCCCEEE-ECCCCchhCHHHHHHHHHh-CCceEEEeccCC
Confidence 35556678777899999999999998888766666666789999886 56554 44578777754 344 6899999
Q ss_pred CCC-----CCceEEEecCCCCCHHHHH
Q psy3942 115 PVP-----MMKLLEVIRTNDTSDATYN 136 (160)
Q Consensus 115 P~~-----~~~lVEvv~~~~T~~~~~~ 136 (160)
|.+ +..+..|+.+|.++..+.+
T Consensus 285 ~EP~~~~~L~~~~nviltPH~~~~t~e 311 (348)
T 2w2k_A 285 FEPQVSKELIEMKHVTLTTHIGGVAIE 311 (348)
T ss_dssp TTTSCCHHHHTSSSEEECCSCTTCSHH
T ss_pred CCCCCCchhhcCCCEEEcCcCCCCCHH
Confidence 532 4456678877777654443
No 67
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=97.30 E-value=0.00046 Score=59.13 Aligned_cols=106 Identities=15% Similarity=0.214 Sum_probs=69.6
Q ss_pred cCceecCChhhhcCCCcEEEEeccCChHH---------HHHHHHHHhhhCCCCcEEeecCCCCCHH---HHhcccCCCCc
Q psy3942 39 SRIKGSSKVEDSVSQSDLVIEAIVENMDI---------KHKLFTSVDKIAPASAILASNTSSLSIT---EIASVTNRKDK 106 (160)
Q Consensus 39 ~~i~~~~~~~~al~~adlViEav~E~l~~---------K~~v~~~l~~~~~~~~iiasnTS~l~i~---~la~~~~~p~r 106 (160)
.++++++|+++++++||+||.|+|++.+. =.++.+.+.+ +++++++. +.|++++. +++..+.. +
T Consensus 95 ~~l~~ttd~~ea~~~aDvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~-l~~g~iVV-~~STv~pgtt~~l~~~l~~--~ 170 (432)
T 3pid_A 95 LNFRATTDKHDAYRNADYVIIATPTDYDPKTNYFNTSTVEAVIRDVTE-INPNAVMI-IKSTIPVGFTRDIKERLGI--D 170 (432)
T ss_dssp CCEEEESCHHHHHTTCSEEEECCCCEEETTTTEEECHHHHHHHHHHHH-HCTTSEEE-ECSCCCTTHHHHHHHHHTC--C
T ss_pred CCeEEEcCHHHHHhCCCEEEEeCCCccccccccccHHHHHHHHHHHHh-cCCCcEEE-EeCCCChHHHHHHHHHHhh--c
Confidence 47999999978899999999999998632 2456677777 67777665 45555543 56655432 2
Q ss_pred EEEeecCCCCCCCce------E---EEecCCCCCHHHHHHHHHHHHH--cCC-eEEEec
Q psy3942 107 FVGLHFFNPVPMMKL------L---EVIRTNDTSDATYNAVTEWGKS--IGK-TTIVCK 153 (160)
Q Consensus 107 ~ig~Hf~~P~~~~~l------V---Evv~~~~T~~~~~~~~~~~~~~--lgk-~pv~v~ 153 (160)
++. |+|....+- . -|+.|. +++..+++..++.. +++ .|+++.
T Consensus 171 --~v~-~sPe~~~~G~A~~~~l~p~rIvvG~--~~~~~~~~~~ll~~~~~~~~~~v~~~ 224 (432)
T 3pid_A 171 --NVI-FSPEFLREGRALYDNLHPSRIVIGE--RSARAERFADLLKEGAIKQDIPTLFT 224 (432)
T ss_dssp --CEE-ECCCCCCTTSHHHHHHSCSCEEESS--CSHHHHHHHHHHHHHCSSSSCCEEEC
T ss_pred --cEe-ecCccCCcchhhhcccCCceEEecC--CHHHHHHHHHHHHhhhccCCCeEEec
Confidence 333 388776552 1 345553 24566778888876 554 366654
No 68
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=97.26 E-value=0.00011 Score=58.17 Aligned_cols=103 Identities=6% Similarity=0.080 Sum_probs=68.0
Q ss_pred hhhhcCCCcEEEEeccCChHHHHHHHHHHhhhCCCCcEEe--ecCCCCCHHHHhcccCCCC-cEEEeecCCCCC---CCc
Q psy3942 47 VEDSVSQSDLVIEAIVENMDIKHKLFTSVDKIAPASAILA--SNTSSLSITEIASVTNRKD-KFVGLHFFNPVP---MMK 120 (160)
Q Consensus 47 ~~~al~~adlViEav~E~l~~K~~v~~~l~~~~~~~~iia--snTS~l~i~~la~~~~~p~-r~ig~Hf~~P~~---~~~ 120 (160)
+++++.++|+|+.|+|....++. ++.++...+++++++. ||.+..+..+|...+.... +++....++++. ...
T Consensus 49 ~~~~~~~~D~vi~~v~~~~~~~~-v~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~~~~~p~~~~~~~~~~g~ 127 (289)
T 2cvz_A 49 PLERVAEARVIFTCLPTTREVYE-VAEALYPYLREGTYWVDATSGEPEASRRLAERLREKGVTYLDAPVSGGTSGAEAGT 127 (289)
T ss_dssp CGGGGGGCSEEEECCSSHHHHHH-HHHHHTTTCCTTEEEEECSCCCHHHHHHHHHHHHTTTEEEEECCEESHHHHHHHTC
T ss_pred HHHHHhCCCEEEEeCCChHHHHH-HHHHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEEecCCCChhHHhhCC
Confidence 65678899999999998877765 6688888888898887 4444444556776654321 333321111110 112
Q ss_pred eEEEecCCCCCHHHHHHHHHHHHHcCCeEEEecC
Q psy3942 121 LLEVIRTNDTSDATYNAVTEWGKSIGKTTIVCKD 154 (160)
Q Consensus 121 lVEvv~~~~T~~~~~~~~~~~~~~lgk~pv~v~d 154 (160)
+.-++. ++++..+.+..++ .+|+.++.+.|
T Consensus 128 ~~~~~~---~~~~~~~~~~~ll-~~g~~~~~~~~ 157 (289)
T 2cvz_A 128 LTVMLG---GPEEAVERVRPFL-AYAKKVVHVGP 157 (289)
T ss_dssp EEEEEE---SCHHHHHHHGGGC-TTEEEEEEEES
T ss_pred eEEEEC---CCHHHHHHHHHHH-hhcCCeEEcCC
Confidence 233332 3789999999999 99998888755
No 69
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=97.24 E-value=0.00023 Score=58.95 Aligned_cols=111 Identities=12% Similarity=0.016 Sum_probs=75.7
Q ss_pred CceecCChhhhcCCCcEEEEeccCChHHHHHHHHHHhh----hCCCCcEEeecCCCCCHH-----HH----hcccCCCCc
Q psy3942 40 RIKGSSKVEDSVSQSDLVIEAIVENMDIKHKLFTSVDK----IAPASAILASNTSSLSIT-----EI----ASVTNRKDK 106 (160)
Q Consensus 40 ~i~~~~~~~~al~~adlViEav~E~l~~K~~v~~~l~~----~~~~~~iiasnTS~l~i~-----~l----a~~~~~p~r 106 (160)
++..+++++++++++|+||.|+|. ...++++.+|.. .+++++++.|.+.++++. .+ ......+
T Consensus 90 ~i~~~~~~~ea~~~aDvVilav~~--~~~~~vl~~i~~~~~~~l~~~~ivvs~~~Gi~~~~~~~~~l~~~l~~~~~~~-- 165 (375)
T 1yj8_A 90 NIVAHSDLASVINDADLLIFIVPC--QYLESVLASIKESESIKIASHAKAISLTKGFIVKKNQMKLCSNYISDFLNIP-- 165 (375)
T ss_dssp TEEEESSTHHHHTTCSEEEECCCH--HHHHHHHHHHTC---CCCCTTCEEEECCCSCEEETTEEECHHHHHHHHSSSC--
T ss_pred CeEEECCHHHHHcCCCEEEEcCCH--HHHHHHHHHHhhhhhccCCCCCEEEEeCCccccCCccccCHHHHHHHHcCCC--
Confidence 577788887778999999999996 678899999998 889999999998887651 12 1222111
Q ss_pred EEEeecCCCCCCC-----ceEEEecCCCCCHHHHHHHHHHHHHcCCeEEEecCcCc
Q psy3942 107 FVGLHFFNPVPMM-----KLLEVIRTNDTSDATYNAVTEWGKSIGKTTIVCKDTPG 157 (160)
Q Consensus 107 ~ig~Hf~~P~~~~-----~lVEvv~~~~T~~~~~~~~~~~~~~lgk~pv~v~d~pG 157 (160)
+. -...|.... ....++.+ ..+++..+.+..++...|..+....|..|
T Consensus 166 ~~--v~~gp~~a~~v~~g~~~~~~~~-~~~~~~~~~v~~ll~~~g~~~~~~~di~~ 218 (375)
T 1yj8_A 166 CS--ALSGANIAMDVAMENFSEATIG-GNDKDSLVIWQRVFDLPYFKINCVNETIE 218 (375)
T ss_dssp EE--EEECSCCHHHHHTTCCEEEEEE-CSCHHHHHHHHHHHCBTTEEEEEESCSHH
T ss_pred EE--EEeCCchHHHHHhCCCeEEEEe-cCCHHHHHHHHHHhCCCCeEEEEeCCcHH
Confidence 11 123343211 11222322 24678889999999999998887777643
No 70
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=97.11 E-value=0.0011 Score=56.81 Aligned_cols=113 Identities=14% Similarity=0.148 Sum_probs=78.1
Q ss_pred hcCceecCChhhhcCCCcEEEEeccCCh--------HHHHHHHHHHhhhCCCCcEEeecCCCCCHH---HHhcccCC--C
Q psy3942 38 LSRIKGSSKVEDSVSQSDLVIEAIVENM--------DIKHKLFTSVDKIAPASAILASNTSSLSIT---EIASVTNR--K 104 (160)
Q Consensus 38 l~~i~~~~~~~~al~~adlViEav~E~l--------~~K~~v~~~l~~~~~~~~iiasnTS~l~i~---~la~~~~~--p 104 (160)
.+++++++|+++++++||+||.|+|... ...+++++.+.+.+++++++...| ++++. +++..+.. +
T Consensus 63 ~~~l~~t~d~~ea~~~aDvViiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~g~iVV~~S-Tv~pgt~~~l~~~l~~~~~ 141 (450)
T 3gg2_A 63 AGRLRFGTEIEQAVPEADIIFIAVGTPAGEDGSADMSYVLDAARSIGRAMSRYILIVTKS-TVPVGSYRLIRKAIQEELD 141 (450)
T ss_dssp TTSEEEESCHHHHGGGCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECS-CCCTTHHHHHHHHHHHHHH
T ss_pred cCcEEEECCHHHHHhcCCEEEEEcCCCcccCCCcChHHHHHHHHHHHhhCCCCCEEEEee-eCCCcchHHHHHHHHHhcc
Confidence 4679999999878999999999998875 377889999999999998876544 45433 34332210 1
Q ss_pred -----CcEEEeecCCCCCCCceEE---------EecCCCCCHHHHHHHHHHHHHcCC--eEEEecC
Q psy3942 105 -----DKFVGLHFFNPVPMMKLLE---------VIRTNDTSDATYNAVTEWGKSIGK--TTIVCKD 154 (160)
Q Consensus 105 -----~r~ig~Hf~~P~~~~~lVE---------vv~~~~T~~~~~~~~~~~~~~lgk--~pv~v~d 154 (160)
..+-- .++|....+-.- |+-|. .++++.+.+..+++.+++ .++.+.|
T Consensus 142 ~~~~~~d~~v--~~~Pe~a~eG~~~~~~~~p~~ivvG~-~~~~~~~~~~~l~~~~~~~~~~~~~~d 204 (450)
T 3gg2_A 142 KREVLIDFDI--ASNPEFLKEGNAIDDFMKPDRVVVGV-DSDRARELITSLYKPMLLNNFRVLFMD 204 (450)
T ss_dssp HTTCCCCEEE--EECCCCCCTTSHHHHHHSCSCEEEEE-SSHHHHHHHHHHHTTTCCSCCCEEEEC
T ss_pred ccCcCcceeE--EechhhhcccchhhhccCCCEEEEEc-CCHHHHHHHHHHHHHHhcCCCeEEecC
Confidence 11211 356766655432 44442 468899999999999987 4666654
No 71
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=97.05 E-value=0.00011 Score=61.25 Aligned_cols=101 Identities=9% Similarity=0.072 Sum_probs=68.4
Q ss_pred CceecCChhhhcCCC---cEEEEeccCChHHHHHHHHHHhhhCCCCcEEeecCCCCCHH--HHhcccC-CCCcEEEeecC
Q psy3942 40 RIKGSSKVEDSVSQS---DLVIEAIVENMDIKHKLFTSVDKIAPASAILASNTSSLSIT--EIASVTN-RKDKFVGLHFF 113 (160)
Q Consensus 40 ~i~~~~~~~~al~~a---dlViEav~E~l~~K~~v~~~l~~~~~~~~iiasnTS~l~i~--~la~~~~-~p~r~ig~Hf~ 113 (160)
.+..+++++++++++ |+||-|+|.+ .-.+++..|...++++++|...+++.+.+ +++..+. +--++++..-+
T Consensus 65 g~~~~~s~~e~~~~a~~~DvVi~~vp~~--~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~vdapVs 142 (358)
T 4e21_A 65 GIAGARSIEEFCAKLVKPRVVWLMVPAA--VVDSMLQRMTPLLAANDIVIDGGNSHYQDDIRRADQMRAQGITYVDVGTS 142 (358)
T ss_dssp TCBCCSSHHHHHHHSCSSCEEEECSCGG--GHHHHHHHHGGGCCTTCEEEECSSCCHHHHHHHHHHHHTTTCEEEEEEEE
T ss_pred CCEEeCCHHHHHhcCCCCCEEEEeCCHH--HHHHHHHHHHhhCCCCCEEEeCCCCChHHHHHHHHHHHHCCCEEEeCCCC
Confidence 466778887777888 9999999999 45578899999999999998877776544 4544442 22234443222
Q ss_pred CCCC---CCceEEEecCCCCCHHHHHHHHHHHHHcC
Q psy3942 114 NPVP---MMKLLEVIRTNDTSDATYNAVTEWGKSIG 146 (160)
Q Consensus 114 ~P~~---~~~lVEvv~~~~T~~~~~~~~~~~~~~lg 146 (160)
.++. ..+ =++.| .++++++++..+++.+|
T Consensus 143 Gg~~~a~~G~--~im~G--G~~~a~~~~~~ll~~lg 174 (358)
T 4e21_A 143 GGIFGLERGY--CLMIG--GEKQAVERLDPVFRTLA 174 (358)
T ss_dssp CGGGHHHHCC--EEEEE--SCHHHHHHTHHHHHHHS
T ss_pred CCHHHHhcCC--eeeec--CCHHHHHHHHHHHHHhc
Confidence 1111 011 13333 47899999999999999
No 72
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=97.04 E-value=0.0011 Score=53.58 Aligned_cols=64 Identities=17% Similarity=0.218 Sum_probs=47.2
Q ss_pred cCChhhhcCCCcEEEEeccCC------------------hHHHHHHHHHHhhhCCCCcEE--eecCCCCCHHHHhccc--
Q psy3942 44 SSKVEDSVSQSDLVIEAIVEN------------------MDIKHKLFTSVDKIAPASAIL--ASNTSSLSITEIASVT-- 101 (160)
Q Consensus 44 ~~~~~~al~~adlViEav~E~------------------l~~K~~v~~~l~~~~~~~~ii--asnTS~l~i~~la~~~-- 101 (160)
++++ +++++||+||.|++.. +++++++++++.+.++ ++++ .||...+ +++++...
T Consensus 61 ~~d~-~~~~~aDvViiav~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~~-~~~ii~~tNp~~~-~~~~~~~~~~ 137 (309)
T 1hyh_A 61 INDW-AALADADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGF-HGVLVVISNPVDV-ITALFQHVTG 137 (309)
T ss_dssp ESCG-GGGTTCSEEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTC-CSEEEECSSSHHH-HHHHHHHHHC
T ss_pred eCCH-HHhCCCCEEEEecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC-CcEEEEEcCcHHH-HHHHHHHhcC
Confidence 5678 6899999999999863 3467899999999885 5544 6776665 44455432
Q ss_pred CCCCcEEEe
Q psy3942 102 NRKDKFVGL 110 (160)
Q Consensus 102 ~~p~r~ig~ 110 (160)
-.|.|++|+
T Consensus 138 ~~~~rvig~ 146 (309)
T 1hyh_A 138 FPAHKVIGT 146 (309)
T ss_dssp CCGGGEEEC
T ss_pred CCHHHEeec
Confidence 346799998
No 73
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=97.02 E-value=0.00022 Score=58.68 Aligned_cols=92 Identities=16% Similarity=0.132 Sum_probs=63.8
Q ss_pred ceecCChhhhcCCCcEEEEeccCChHHHHHHHHHHhhhCCCCcEEeecCCCC---CHHHHhcccCC-CCcEEEeecCCCC
Q psy3942 41 IKGSSKVEDSVSQSDLVIEAIVENMDIKHKLFTSVDKIAPASAILASNTSSL---SITEIASVTNR-KDKFVGLHFFNPV 116 (160)
Q Consensus 41 i~~~~~~~~al~~adlViEav~E~l~~K~~v~~~l~~~~~~~~iiasnTS~l---~i~~la~~~~~-p~r~ig~Hf~~P~ 116 (160)
+.++ ++++.++++|+|+.++|.+.+.+.-+.+++-+.++++++|. |+|+. ...+|...+.. .-...|+++|+|.
T Consensus 199 ~~~~-~l~e~l~~aDvVi~~vp~~~~t~~~i~~~~~~~mk~gailI-n~srg~~v~~~aL~~aL~~~~i~ga~lDv~~~e 276 (330)
T 2gcg_A 199 AEFV-STPELAAQSDFIVVACSLTPATEGLCNKDFFQKMKETAVFI-NISRGDVVNQDDLYQALASGKIAAAGLDVTSPE 276 (330)
T ss_dssp CEEC-CHHHHHHHCSEEEECCCCCTTTTTCBSHHHHHHSCTTCEEE-ECSCGGGBCHHHHHHHHHHTSSSEEEESCCSSS
T ss_pred ceeC-CHHHHHhhCCEEEEeCCCChHHHHhhCHHHHhcCCCCcEEE-ECCCCcccCHHHHHHHHHcCCccEEEeCCCCCC
Confidence 4555 77677899999999999987776655555666788999886 55554 44677776643 3345789999876
Q ss_pred C------CCceEEEecCCCCCHHH
Q psy3942 117 P------MMKLLEVIRTNDTSDAT 134 (160)
Q Consensus 117 ~------~~~lVEvv~~~~T~~~~ 134 (160)
+ +..+.+|+.+|.++..+
T Consensus 277 pl~~~~~l~~~~nvi~tPh~~~~t 300 (330)
T 2gcg_A 277 PLPTNHPLLTLKNCVILPHIGSAT 300 (330)
T ss_dssp SCCTTCGGGGCTTEEECCSCTTCB
T ss_pred CCCCCChhhcCCCEEECCCCCCCc
Confidence 4 33445788766665443
No 74
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=96.98 E-value=0.00098 Score=55.56 Aligned_cols=54 Identities=20% Similarity=0.215 Sum_probs=46.0
Q ss_pred Cce-ecCChhhhcCCCcEEEEeccCChHHHHHHHHHHhhhCCCCcEEeecCCCCCHH
Q psy3942 40 RIK-GSSKVEDSVSQSDLVIEAIVENMDIKHKLFTSVDKIAPASAILASNTSSLSIT 95 (160)
Q Consensus 40 ~i~-~~~~~~~al~~adlViEav~E~l~~K~~v~~~l~~~~~~~~iiasnTS~l~i~ 95 (160)
++. +++++++++.++|+||.|++... +++++++|...++++++|.+++++..+.
T Consensus 68 ~~~~~~~~~~~a~~~aD~Vilav~~~~--~~~v~~~l~~~l~~~~ivv~~~~~~G~~ 122 (404)
T 3c7a_A 68 RPKVITKDPEIAISGADVVILTVPAFA--HEGYFQAMAPYVQDSALIVGLPSQAGFE 122 (404)
T ss_dssp CCSEEESCHHHHHTTCSEEEECSCGGG--HHHHHHHHTTTCCTTCEEEETTCCTTHH
T ss_pred cceEEeCCHHHHhCCCCEEEEeCchHH--HHHHHHHHHhhCCCCcEEEEcCCCccHH
Confidence 454 67888777899999999999986 6899999999999999999987776644
No 75
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=96.88 E-value=0.0019 Score=55.67 Aligned_cols=113 Identities=14% Similarity=0.203 Sum_probs=74.3
Q ss_pred cCceecCChhhhcCCCcEEEEeccCCh-------------HHHHHHHHHHhhhCCCCcEEeecCCCCCH--H-HHhcccC
Q psy3942 39 SRIKGSSKVEDSVSQSDLVIEAIVENM-------------DIKHKLFTSVDKIAPASAILASNTSSLSI--T-EIASVTN 102 (160)
Q Consensus 39 ~~i~~~~~~~~al~~adlViEav~E~l-------------~~K~~v~~~l~~~~~~~~iiasnTS~l~i--~-~la~~~~ 102 (160)
.++++++++.+++++||+||-|+|... ..-.++++.|.+.++++++|. +.|++++ + +++..+.
T Consensus 72 ~~l~~t~~~~~~~~~aDvvii~Vptp~~~~g~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV-~~STv~~gt~~~l~~~l~ 150 (481)
T 2o3j_A 72 RNLFFSSDIPKAIAEADLIFISVNTPTKMYGRGKGMAPDLKYVESVSRTIAQYAGGPKIVV-EKSTVPVKAAESIGCILR 150 (481)
T ss_dssp TTEEEESCHHHHHHHCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHHCCSCEEEE-ECSCCCTTHHHHHHHHHH
T ss_pred CCEEEECCHHHHhhcCCEEEEecCCccccccccccCCCcHHHHHHHHHHHHHhCCCCCEEE-ECCCCCCCHHHHHHHHHH
Confidence 468899998778999999999998753 356788899999999998776 3334443 2 3333221
Q ss_pred C--C----CcEEEeecCCCCCCCceE---------EEecCCCCC---HHHHHHHHHHHHHcCC-eEEEecC
Q psy3942 103 R--K----DKFVGLHFFNPVPMMKLL---------EVIRTNDTS---DATYNAVTEWGKSIGK-TTIVCKD 154 (160)
Q Consensus 103 ~--p----~r~ig~Hf~~P~~~~~lV---------Evv~~~~T~---~~~~~~~~~~~~~lgk-~pv~v~d 154 (160)
. . ..+ .+ .++|....+-- .|+-|..++ +++.+.+..+++.+|+ .++.+.|
T Consensus 151 ~~~~~~~~~d~-~v-~~~Pe~~~~G~a~~~~~~~~~iviG~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~d 219 (481)
T 2o3j_A 151 EAQKNNENLKF-QV-LSNPEFLAEGTAMKDLANPDRVLIGGESSPEGLQAVAELVRIYENWVPRNRIITTN 219 (481)
T ss_dssp HHTC----CCE-EE-EECCCCCCTTCHHHHHHSCSCEEEEECSSHHHHHHHHHHHHHHHTTSCGGGEEEEE
T ss_pred HhhCcCcCCce-EE-EeCcccccccchhhcccCCCEEEEEecCchhhHHHHHHHHHHHHhhcCCCeEEecC
Confidence 1 1 111 11 35665554432 466554443 3688899999999996 6776644
No 76
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=96.86 E-value=5.1e-05 Score=62.64 Aligned_cols=93 Identities=23% Similarity=0.263 Sum_probs=62.5
Q ss_pred ceecCChhhhcCCCcEEEEeccCChHHHHHHHHHHhhhCCCCcEEeecCCCCCHH---HHhcccCC-CCcEEEeecCCCC
Q psy3942 41 IKGSSKVEDSVSQSDLVIEAIVENMDIKHKLFTSVDKIAPASAILASNTSSLSIT---EIASVTNR-KDKFVGLHFFNPV 116 (160)
Q Consensus 41 i~~~~~~~~al~~adlViEav~E~l~~K~~v~~~l~~~~~~~~iiasnTS~l~i~---~la~~~~~-p~r~ig~Hf~~P~ 116 (160)
+.+ .++++.++++|+|+.++|.+.+.+.-+.+++-+.++++++|. |+|.-++. +|...+.. +-.-.|+|+|+|.
T Consensus 193 ~~~-~~l~~~l~~aDvVil~vp~~~~t~~~i~~~~~~~mk~~ailI-n~srg~~v~~~aL~~aL~~~~i~ga~lDv~~~E 270 (334)
T 2dbq_A 193 AEF-KPLEDLLRESDFVVLAVPLTRETYHLINEERLKLMKKTAILI-NIARGKVVDTNALVKALKEGWIAGAGLDVFEEE 270 (334)
T ss_dssp CEE-CCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTCEEE-ECSCGGGBCHHHHHHHHHHTSSSEEEESCCSSS
T ss_pred ccc-CCHHHHHhhCCEEEECCCCChHHHHhhCHHHHhcCCCCcEEE-ECCCCcccCHHHHHHHHHhCCeeEEEecCCCCC
Confidence 344 477677899999999999998877655556666788999884 55555443 46666643 2234789999943
Q ss_pred C-----CCceEEEecCCCCCHHHH
Q psy3942 117 P-----MMKLLEVIRTNDTSDATY 135 (160)
Q Consensus 117 ~-----~~~lVEvv~~~~T~~~~~ 135 (160)
+ +..+..|+.+|.++..+.
T Consensus 271 P~~~~~L~~~~~vi~tPh~~~~t~ 294 (334)
T 2dbq_A 271 PYYNEELFKLDNVVLTPHIGSASF 294 (334)
T ss_dssp SCCCHHHHHCTTEEECSSCTTCSH
T ss_pred CCCCchhhcCCCEEECCccCCCcH
Confidence 2 334557887666654433
No 77
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=96.84 E-value=0.00019 Score=59.33 Aligned_cols=94 Identities=19% Similarity=0.172 Sum_probs=63.2
Q ss_pred eecCChhhhcCCCcEEEEeccCChHHHHHHHHHHhhhCCCCcEEeecCCCCCH---HHHhcccCC-CCcEEEeecCC--C
Q psy3942 42 KGSSKVEDSVSQSDLVIEAIVENMDIKHKLFTSVDKIAPASAILASNTSSLSI---TEIASVTNR-KDKFVGLHFFN--P 115 (160)
Q Consensus 42 ~~~~~~~~al~~adlViEav~E~l~~K~~v~~~l~~~~~~~~iiasnTS~l~i---~~la~~~~~-p~r~ig~Hf~~--P 115 (160)
....++++.++++|+|+.++|.+.+.+.-+-+++-+.++++++|. |+|.-.+ .+|.+.+.. .-+..|+++|. |
T Consensus 204 ~~~~~l~ell~~aDvVil~vP~~~~t~~li~~~~l~~mk~gailI-n~srG~~vd~~aL~~aL~~g~i~ga~lDv~~~EP 282 (333)
T 3ba1_A 204 TYYGSVVELASNSDILVVACPLTPETTHIINREVIDALGPKGVLI-NIGRGPHVDEPELVSALVEGRLGGAGLDVFEREP 282 (333)
T ss_dssp EEESCHHHHHHTCSEEEECSCCCGGGTTCBCHHHHHHHCTTCEEE-ECSCGGGBCHHHHHHHHHHTSSCEEEESCCTTTT
T ss_pred eecCCHHHHHhcCCEEEEecCCChHHHHHhhHHHHhcCCCCCEEE-ECCCCchhCHHHHHHHHHcCCCeEEEEecCCCCC
Confidence 445678777899999999999987766544344444568888885 5555444 477777753 35778999998 4
Q ss_pred C---CCCceEEEecCCCCCHHHHH
Q psy3942 116 V---PMMKLLEVIRTNDTSDATYN 136 (160)
Q Consensus 116 ~---~~~~lVEvv~~~~T~~~~~~ 136 (160)
. ++..+..|+.+|.++..+.+
T Consensus 283 ~~~~~L~~~~nviltPH~~~~t~e 306 (333)
T 3ba1_A 283 EVPEKLFGLENVVLLPHVGSGTVE 306 (333)
T ss_dssp CCCGGGGGCTTEEECSSCTTCSHH
T ss_pred CCcchhhcCCCEEECCcCCCCCHH
Confidence 2 23445567777666554433
No 78
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=96.66 E-value=0.0028 Score=49.67 Aligned_cols=98 Identities=11% Similarity=0.200 Sum_probs=69.3
Q ss_pred hhcCCCcEEEEeccCChHHHHHHHHHHhhhCCCCcEEeecCCCCCHH-HHhcccCCCCcEE-EeecC-----CCCCCCce
Q psy3942 49 DSVSQSDLVIEAIVENMDIKHKLFTSVDKIAPASAILASNTSSLSIT-EIASVTNRKDKFV-GLHFF-----NPVPMMKL 121 (160)
Q Consensus 49 ~al~~adlViEav~E~l~~K~~v~~~l~~~~~~~~iiasnTS~l~i~-~la~~~~~p~r~i-g~Hf~-----~P~~~~~l 121 (160)
++++++|+||-|++... + .++++++...++++++|.+.+.++... .+...+ |+ ++ |.+++ .| . .
T Consensus 59 ~~~~~~d~vi~~v~~~~-~-~~v~~~l~~~l~~~~~vv~~~~g~~~~~~l~~~~--~~-~~~g~~~~~~~~~~p-~---~ 129 (291)
T 1ks9_A 59 DFLATSDLLLVTLKAWQ-V-SDAVKSLASTLPVTTPILLIHNGMGTIEELQNIQ--QP-LLMGTTTHAARRDGN-V---I 129 (291)
T ss_dssp HHHHTCSEEEECSCGGG-H-HHHHHHHHTTSCTTSCEEEECSSSCTTGGGTTCC--SC-EEEEEECCEEEEETT-E---E
T ss_pred cccCCCCEEEEEecHHh-H-HHHHHHHHhhCCCCCEEEEecCCCCcHHHHHHhc--CC-eEEEEEeEccEEcCC-E---E
Confidence 56789999999999875 3 788999999999999988888888775 455444 33 54 54432 34 2 2
Q ss_pred EEEecC-----C-CCCHHHHHHHHHHHHHcCCeEEEecCc
Q psy3942 122 LEVIRT-----N-DTSDATYNAVTEWGKSIGKTTIVCKDT 155 (160)
Q Consensus 122 VEvv~~-----~-~T~~~~~~~~~~~~~~lgk~pv~v~d~ 155 (160)
.++..| . ..+++..+++..+++.+|..+.+..|.
T Consensus 130 ~~~~~g~~~i~~~~~~~~~~~~~~~ll~~~g~~~~~~~~~ 169 (291)
T 1ks9_A 130 IHVANGITHIGPARQQDGDYSYLADILQTVLPDVAWHNNI 169 (291)
T ss_dssp EEEECCCEEEEESSGGGTTCTHHHHHHHTTSSCEEECTTH
T ss_pred EEecccceEEccCCCCcchHHHHHHHHHhcCCCCeecHHH
Confidence 233332 1 234567788999999999988777663
No 79
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=96.60 E-value=0.0046 Score=50.10 Aligned_cols=110 Identities=14% Similarity=0.151 Sum_probs=74.8
Q ss_pred CceecCChhhhcCCCcEEEEeccCChHHHHHHHHHHhhhCCCCcEEeecCCCCCH-HHHhcccCCCCcEEEe------ec
Q psy3942 40 RIKGSSKVEDSVSQSDLVIEAIVENMDIKHKLFTSVDKIAPASAILASNTSSLSI-TEIASVTNRKDKFVGL------HF 112 (160)
Q Consensus 40 ~i~~~~~~~~al~~adlViEav~E~l~~K~~v~~~l~~~~~~~~iiasnTS~l~i-~~la~~~~~p~r~ig~------Hf 112 (160)
++..+++.+ ++.++|+||-|++.. .+ ++++++|...++++++|.|.+.++.. ..|.+.+. +++++. ..
T Consensus 74 ~~~~~~~~~-~~~~~D~vilavk~~-~~-~~~l~~l~~~l~~~~~iv~~~nGi~~~~~l~~~~~--~~vl~g~~~~~a~~ 148 (318)
T 3hwr_A 74 KVSASSDPS-AVQGADLVLFCVKST-DT-QSAALAMKPALAKSALVLSLQNGVENADTLRSLLE--QEVAAAVVYVATEM 148 (318)
T ss_dssp CCEEESCGG-GGTTCSEEEECCCGG-GH-HHHHHHHTTTSCTTCEEEEECSSSSHHHHHHHHCC--SEEEEEEEEEEEEE
T ss_pred eeeeeCCHH-HcCCCCEEEEEcccc-cH-HHHHHHHHHhcCCCCEEEEeCCCCCcHHHHHHHcC--CcEEEEEEEEeEEE
Confidence 466678884 579999999999997 44 68999999999999999999999998 45666664 566642 22
Q ss_pred CCCCCCCce--EEEecCCCCCHHHHHHHHHHHHHcCCeEEEecCcCc
Q psy3942 113 FNPVPMMKL--LEVIRTNDTSDATYNAVTEWGKSIGKTTIVCKDTPG 157 (160)
Q Consensus 113 ~~P~~~~~l--VEvv~~~~T~~~~~~~~~~~~~~lgk~pv~v~d~pG 157 (160)
..|-+.... =.+.-|. .+..+.+.+++...|..+.+..|.-|
T Consensus 149 ~gP~~~~~~~~g~~~ig~---~~~~~~l~~~l~~~~~~~~~~~Di~~ 192 (318)
T 3hwr_A 149 AGPGHVRHHGRGELVIEP---TSHGANLAAIFAAAGVPVETSDNVRG 192 (318)
T ss_dssp EETTEEEEEEEEEEEECC---CTTTHHHHHHHHHTTCCEEECSCHHH
T ss_pred cCCeEEEEcCCceEEEcC---CHHHHHHHHHHHhCCCCcEechHHHH
Confidence 234321110 0122232 23456777888888887766666543
No 80
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=96.58 E-value=0.00045 Score=57.00 Aligned_cols=93 Identities=19% Similarity=0.206 Sum_probs=63.2
Q ss_pred ceecCChhhhcCCCcEEEEeccCChHHHHHHHHHHhhhCCCCcEEeecCCCCCHH---HHhcccCC-CCcEEEeecCC--
Q psy3942 41 IKGSSKVEDSVSQSDLVIEAIVENMDIKHKLFTSVDKIAPASAILASNTSSLSIT---EIASVTNR-KDKFVGLHFFN-- 114 (160)
Q Consensus 41 i~~~~~~~~al~~adlViEav~E~l~~K~~v~~~l~~~~~~~~iiasnTS~l~i~---~la~~~~~-p~r~ig~Hf~~-- 114 (160)
+.++ ++++.++++|+|+.++|.+.+.+.-+.+++-+.++++ +| .|+|.-++. +|...+.. .-+..|+|+|.
T Consensus 189 ~~~~-~l~e~l~~aDiVil~vp~~~~t~~~i~~~~~~~mk~g-il-in~srg~~vd~~aL~~aL~~~~i~gaglDv~~~E 265 (333)
T 2d0i_A 189 ARYM-DIDELLEKSDIVILALPLTRDTYHIINEERVKKLEGK-YL-VNIGRGALVDEKAVTEAIKQGKLKGYATDVFEKE 265 (333)
T ss_dssp EEEC-CHHHHHHHCSEEEECCCCCTTTTTSBCHHHHHHTBTC-EE-EECSCGGGBCHHHHHHHHHTTCBCEEEESCCSSS
T ss_pred ceec-CHHHHHhhCCEEEEcCCCChHHHHHhCHHHHhhCCCC-EE-EECCCCcccCHHHHHHHHHcCCceEEEecCCCCC
Confidence 4444 7766789999999999999777765555555567888 55 666665544 46666643 34568999999
Q ss_pred CCC---CCceE-EEecCCCCCHHHHH
Q psy3942 115 PVP---MMKLL-EVIRTNDTSDATYN 136 (160)
Q Consensus 115 P~~---~~~lV-Evv~~~~T~~~~~~ 136 (160)
|.+ +..+. .|+.+|.++..+.+
T Consensus 266 P~~~~~L~~~~~nviltPh~~~~t~~ 291 (333)
T 2d0i_A 266 PVREHELFKYEWETVLTPHYAGLALE 291 (333)
T ss_dssp SCSCCGGGGCTTTEEECCSCTTCCHH
T ss_pred CCCCchHHcCCCCEEEcCccCCCcHH
Confidence 643 44556 78877776654433
No 81
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=96.48 E-value=0.0032 Score=50.59 Aligned_cols=111 Identities=11% Similarity=0.028 Sum_probs=71.9
Q ss_pred ceecC--ChhhhcCCCcEEEEeccCChHHHHHHHHHHhhhCCCCcEEeecCCCC------CHHHHhcccCC--CCcEEEe
Q psy3942 41 IKGSS--KVEDSVSQSDLVIEAIVENMDIKHKLFTSVDKIAPASAILASNTSSL------SITEIASVTNR--KDKFVGL 110 (160)
Q Consensus 41 i~~~~--~~~~al~~adlViEav~E~l~~K~~v~~~l~~~~~~~~iiasnTS~l------~i~~la~~~~~--p~r~ig~ 110 (160)
+..++ ++.++++++|+||-|++.. ...+++..+.. ++++++|.+.+.++ ....+++.+.. +....+.
T Consensus 57 ~~~~~~~~~~~~~~~~D~vi~~v~~~--~~~~v~~~i~~-l~~~~~vv~~~ng~~~~~~~~~~~l~~~~~~~~g~~~~~~ 133 (335)
T 1txg_A 57 VEIFWPEQLEKCLENAEVVLLGVSTD--GVLPVMSRILP-YLKDQYIVLISKGLIDFDNSVLTVPEAVWRLKHDLRERTV 133 (335)
T ss_dssp EEEECGGGHHHHHTTCSEEEECSCGG--GHHHHHHHHTT-TCCSCEEEECCCSEEEETTEEEEHHHHHHTTSTTCGGGEE
T ss_pred eEEecHHhHHHHHhcCCEEEEcCChH--HHHHHHHHHhc-CCCCCEEEEEcCcCccCCCCcCccHHHHHHHhcCCCCcEE
Confidence 45666 7766789999999999987 46788999988 88899888766555 23445444332 2111112
Q ss_pred ecCCCCCCC-----ceEEEecCCCCCHHHHHHHHHHHHHcCCeEEEecCc
Q psy3942 111 HFFNPVPMM-----KLLEVIRTNDTSDATYNAVTEWGKSIGKTTIVCKDT 155 (160)
Q Consensus 111 Hf~~P~~~~-----~lVEvv~~~~T~~~~~~~~~~~~~~lgk~pv~v~d~ 155 (160)
....|.... ....++.+. .+++..+.+..++...|..+.++.|.
T Consensus 134 ~~~~p~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~ll~~~g~~~~~~~di 182 (335)
T 1txg_A 134 AITGPAIAREVAKRMPTTVVFSS-PSESSANKMKEIFETEYFGVEVTTDI 182 (335)
T ss_dssp EEESSCCHHHHHTTCCEEEEEEC-SCHHHHHHHHHHHCBTTEEEEEESCH
T ss_pred EEECCCcHHHHHccCCcEEEEEe-CCHHHHHHHHHHhCCCcEEEEecCch
Confidence 234554321 112333333 35788899999999999887777664
No 82
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=96.42 E-value=0.009 Score=51.20 Aligned_cols=112 Identities=10% Similarity=0.134 Sum_probs=74.4
Q ss_pred cCceecCChhhhcCCCcEEEEeccCChH---------HHHHHHHHHhhhCCCCcEEeecCCCCCHH---HHhcccC--CC
Q psy3942 39 SRIKGSSKVEDSVSQSDLVIEAIVENMD---------IKHKLFTSVDKIAPASAILASNTSSLSIT---EIASVTN--RK 104 (160)
Q Consensus 39 ~~i~~~~~~~~al~~adlViEav~E~l~---------~K~~v~~~l~~~~~~~~iiasnTS~l~i~---~la~~~~--~p 104 (160)
+++++++|+++++++||+||-|||-..+ .-+++++.+.+.+++++++..- |++++. +++..+. .+
T Consensus 70 g~l~~ttd~~ea~~~aDvvii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~~g~iVV~~-STv~pgtt~~l~~~l~e~~~ 148 (446)
T 4a7p_A 70 GRLSFTTDLAEGVKDADAVFIAVGTPSRRGDGHADLSYVFAAAREIAENLTKPSVIVTK-STVPVGTGDEVERIIAEVAP 148 (446)
T ss_dssp TCEEEESCHHHHHTTCSEEEECCCCCBCTTTCCBCTHHHHHHHHHHHHSCCSCCEEEEC-SCCCTTHHHHHHHHHHHHST
T ss_pred CCEEEECCHHHHHhcCCEEEEEcCCCCccccCCccHHHHHHHHHHHHHhcCCCCEEEEe-CCCCchHHHHHHHHHHHhCC
Confidence 6799999997789999999999887653 4678889999999998887763 455543 3333221 11
Q ss_pred -CcEEEeecCCCCCCCceE---------EEecCCCCCHHHHHHHHHHHHHcCCe---EEEecC
Q psy3942 105 -DKFVGLHFFNPVPMMKLL---------EVIRTNDTSDATYNAVTEWGKSIGKT---TIVCKD 154 (160)
Q Consensus 105 -~r~ig~Hf~~P~~~~~lV---------Evv~~~~T~~~~~~~~~~~~~~lgk~---pv~v~d 154 (160)
..+-. .++|....+-- -|+-| .+++++.+.+..++..+++. |+.+.|
T Consensus 149 ~~d~~v--~~~Pe~a~eG~a~~d~~~p~~ivvG-~~~~~~~~~~~~ly~~~~~~~~~~~~~~d 208 (446)
T 4a7p_A 149 NSGAKV--VSNPEFLREGAAIEDFKRPDRVVVG-TEDEFARQVMREIYRPLSLNQSAPVLFTG 208 (446)
T ss_dssp TSCCEE--EECCCCCCTTSHHHHHHSCSCEEEE-CSCHHHHHHHHHHHCSCC-----CEEEEC
T ss_pred CCCceE--EeCcccccccchhhhccCCCEEEEe-CCcHHHHHHHHHHHHHHhcCCCeEEEeCC
Confidence 11111 25665554432 24443 34688999999999988885 566655
No 83
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=96.38 E-value=0.0033 Score=54.01 Aligned_cols=104 Identities=10% Similarity=0.068 Sum_probs=70.4
Q ss_pred CceecCChhhhcCC---CcEEEEeccCChHHHHHHHHHHhhhCCCCcEEeecCCCCC--HHHHhcccCC-CCcEEEeecC
Q psy3942 40 RIKGSSKVEDSVSQ---SDLVIEAIVENMDIKHKLFTSVDKIAPASAILASNTSSLS--ITEIASVTNR-KDKFVGLHFF 113 (160)
Q Consensus 40 ~i~~~~~~~~al~~---adlViEav~E~l~~K~~v~~~l~~~~~~~~iiasnTS~l~--i~~la~~~~~-p~r~ig~Hf~ 113 (160)
.+..++++++.+++ +|+|+.|+|....++ +++.+|...++++++|.+.+++.+ ..++...+.. .-+++++...
T Consensus 52 gi~~~~s~~e~v~~l~~aDvVilavp~~~~v~-~vl~~l~~~l~~g~iiId~s~~~~~~~~~l~~~l~~~g~~~v~~pv~ 130 (474)
T 2iz1_A 52 NLVFTKTLEEFVGSLEKPRRIMLMVQAGAATD-ATIKSLLPLLDIGDILIDGGNTHFPDTMRRNAELADSGINFIGTGVS 130 (474)
T ss_dssp CEEECSSHHHHHHTBCSSCEEEECCCTTHHHH-HHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHTTTSSCEEEEEEEC
T ss_pred CeEEeCCHHHHHhhccCCCEEEEEccCchHHH-HHHHHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHCCCeEECCCCC
Confidence 47778888766665 999999999987776 466888888988888876665553 3567666543 2244444322
Q ss_pred CCCC---CCceEEEecCCCCCHHHHHHHHHHHHHcCCe
Q psy3942 114 NPVP---MMKLLEVIRTNDTSDATYNAVTEWGKSIGKT 148 (160)
Q Consensus 114 ~P~~---~~~lVEvv~~~~T~~~~~~~~~~~~~~lgk~ 148 (160)
.++. ..+. ++.+. +++.++.+..+++.+|+.
T Consensus 131 gg~~~a~~g~~--i~~gg--~~~~~~~v~~ll~~~g~~ 164 (474)
T 2iz1_A 131 GGEKGALLGPS--MMPGG--QKEAYDLVAPIFEQIAAK 164 (474)
T ss_dssp SHHHHHHHCCC--EEEEE--CHHHHHHHHHHHHHHSCB
T ss_pred CChhhhccCCe--EEecC--CHHHHHHHHHHHHHHhcc
Confidence 2111 1111 34333 789999999999999987
No 84
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=96.32 E-value=0.00089 Score=58.13 Aligned_cols=104 Identities=14% Similarity=0.152 Sum_probs=70.4
Q ss_pred CceecCChhhhcCC---CcEEEEeccCChHHHHHHHHHHhhhCCCCcEEeecCCCCC--HHHHhcccCC-CCcEEEeecC
Q psy3942 40 RIKGSSKVEDSVSQ---SDLVIEAIVENMDIKHKLFTSVDKIAPASAILASNTSSLS--ITEIASVTNR-KDKFVGLHFF 113 (160)
Q Consensus 40 ~i~~~~~~~~al~~---adlViEav~E~l~~K~~v~~~l~~~~~~~~iiasnTS~l~--i~~la~~~~~-p~r~ig~Hf~ 113 (160)
.+..++++++++++ +|+||-+||....++ +++.+|...++++++|.+.+.+.+ ..++++.+.. .-+++++..+
T Consensus 58 gi~~~~s~~e~v~~l~~aDvVil~Vp~~~~v~-~vl~~l~~~l~~g~iIId~s~~~~~~~~~l~~~l~~~g~~~v~~pVs 136 (497)
T 2p4q_A 58 SIIGATSIEDFISKLKRPRKVMLLVKAGAPVD-ALINQIVPLLEKGDIIIDGGNSHFPDSNRRYEELKKKGILFVGSGVS 136 (497)
T ss_dssp SEECCSSHHHHHHTSCSSCEEEECCCSSHHHH-HHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred CeEEeCCHHHHHhcCCCCCEEEEEcCChHHHH-HHHHHHHHhCCCCCEEEECCCCChhHHHHHHHHHHHcCCceeCCCcc
Confidence 57778888766666 999999999987777 455889899988888876555554 3456655432 2245544333
Q ss_pred CCCC---CCceEEEecCCCCCHHHHHHHHHHHHHcCCe
Q psy3942 114 NPVP---MMKLLEVIRTNDTSDATYNAVTEWGKSIGKT 148 (160)
Q Consensus 114 ~P~~---~~~lVEvv~~~~T~~~~~~~~~~~~~~lgk~ 148 (160)
+.+. ..+ =++.|. +++.++.+..+++.+|+.
T Consensus 137 gg~~~a~~G~--~im~gg--~~e~~~~v~~ll~~~g~~ 170 (497)
T 2p4q_A 137 GGEEGARYGP--SLMPGG--SEEAWPHIKNIFQSISAK 170 (497)
T ss_dssp SHHHHHHHCC--EEEEEE--CGGGHHHHHHHHHHHSCE
T ss_pred cChhHhhcCC--eEEecC--CHHHHHHHHHHHHHhcCc
Confidence 3211 011 145443 688999999999999997
No 85
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=96.32 E-value=0.00095 Score=55.30 Aligned_cols=70 Identities=13% Similarity=0.163 Sum_probs=49.3
Q ss_pred cCceecCChhhhcCCCcEEEEe--------------ccCChHHHHHHHHHHhhhCCCCc--EEeecCCCCCHHHHhcccC
Q psy3942 39 SRIKGSSKVEDSVSQSDLVIEA--------------IVENMDIKHKLFTSVDKIAPASA--ILASNTSSLSITEIASVTN 102 (160)
Q Consensus 39 ~~i~~~~~~~~al~~adlViEa--------------v~E~l~~K~~v~~~l~~~~~~~~--iiasnTS~l~i~~la~~~~ 102 (160)
.++..++|++ +++|||+||.+ +.+|.++++++.+++.+.+ |++ ++.||-..+-..-+....+
T Consensus 76 ~~i~~t~d~~-~~~daDiVIitaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~~-P~a~ilvvtNPvdi~t~~~~k~sg 153 (330)
T 3ldh_A 76 AKIVSGKDYS-VSAGSKLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKHS-PDCLKELHPELGTDKNKQDWKLSG 153 (330)
T ss_dssp SEEEEESSSC-SCSSCSEEEECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHHC-TTCEEEECSSSHHHHHHHHHHHHC
T ss_pred CeEEEcCCHH-HhCCCCEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhC-CCceEEeCCCccHHHHHHHHHHhC
Confidence 4677889995 69999999954 7888999999999999996 555 3446654432222222334
Q ss_pred C-CCcEEEe
Q psy3942 103 R-KDKFVGL 110 (160)
Q Consensus 103 ~-p~r~ig~ 110 (160)
. |.|++|+
T Consensus 154 ~p~~rViG~ 162 (330)
T 3ldh_A 154 LPMHRIIGS 162 (330)
T ss_dssp CCGGGEECC
T ss_pred CCHHHeecc
Confidence 3 4677876
No 86
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=96.21 E-value=0.0032 Score=51.61 Aligned_cols=71 Identities=21% Similarity=0.310 Sum_probs=47.4
Q ss_pred hcCceecCChhhhcCCCcEEEEec--------------cCChHHHHHHHHHHhhhCCCCcEE--eecCCCCCHHHHhccc
Q psy3942 38 LSRIKGSSKVEDSVSQSDLVIEAI--------------VENMDIKHKLFTSVDKIAPASAIL--ASNTSSLSITEIASVT 101 (160)
Q Consensus 38 l~~i~~~~~~~~al~~adlViEav--------------~E~l~~K~~v~~~l~~~~~~~~ii--asnTS~l~i~~la~~~ 101 (160)
..+|+.++++ +++++||+||+++ ..|..+.+++...+.+.++ ++++ .||....-..-+....
T Consensus 64 ~~~i~~t~d~-~a~~~aDvVIiaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~~p-~a~vlvvsNPvd~~t~~~~k~s 141 (315)
T 3tl2_A 64 DANIIGTSDY-ADTADSDVVVITAGIARKPGMSRDDLVATNSKIMKSITRDIAKHSP-NAIIVVLTNPVDAMTYSVFKEA 141 (315)
T ss_dssp CCCEEEESCG-GGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCT-TCEEEECCSSHHHHHHHHHHHH
T ss_pred CCEEEEcCCH-HHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCC-CeEEEECCChHHHHHHHHHHhc
Confidence 4578888888 5899999999997 2355678899999999984 5544 3554333222222223
Q ss_pred CC-CCcEEEe
Q psy3942 102 NR-KDKFVGL 110 (160)
Q Consensus 102 ~~-p~r~ig~ 110 (160)
+. |.|++|+
T Consensus 142 g~p~~rviG~ 151 (315)
T 3tl2_A 142 GFPKERVIGQ 151 (315)
T ss_dssp CCCGGGEEEC
T ss_pred CCChHHEEee
Confidence 33 4688887
No 87
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=96.19 E-value=0.0036 Score=54.21 Aligned_cols=111 Identities=13% Similarity=0.119 Sum_probs=73.5
Q ss_pred hcCceecCChhhhcCCCcEEEEeccCCh----------HHHHHHHHHHhhhCCCCcEEeecCCCCCHH---HHhc-----
Q psy3942 38 LSRIKGSSKVEDSVSQSDLVIEAIVENM----------DIKHKLFTSVDKIAPASAILASNTSSLSIT---EIAS----- 99 (160)
Q Consensus 38 l~~i~~~~~~~~al~~adlViEav~E~l----------~~K~~v~~~l~~~~~~~~iiasnTS~l~i~---~la~----- 99 (160)
.++++++++. +++++||+||.|||... +.-....+.+.+.+++++++. +.|++++. +++.
T Consensus 87 ~g~l~~ttd~-ea~~~aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV-~~STv~pgtt~~v~~~ile~ 164 (478)
T 3g79_A 87 AGKFECTPDF-SRISELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLKPGMLVV-LESTITPGTTEGMAKQILEE 164 (478)
T ss_dssp TTCEEEESCG-GGGGGCSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHHHCCTTCEEE-ECSCCCTTTTTTHHHHHHHH
T ss_pred cCCeEEeCcH-HHHhcCCEEEEecCCchhccCCccccHHHHHHHHHHHHhhcCCCcEEE-EeCCCChHHHHHHHHHHHHH
Confidence 4789999996 68999999999999874 334566788888888888764 55666654 3332
Q ss_pred ccCC--CCcEEEeecCCCCCCCceE---------EEecCCCCCHHHHHHHHHHHHHc-CCeEEEecC
Q psy3942 100 VTNR--KDKFVGLHFFNPVPMMKLL---------EVIRTNDTSDATYNAVTEWGKSI-GKTTIVCKD 154 (160)
Q Consensus 100 ~~~~--p~r~ig~Hf~~P~~~~~lV---------Evv~~~~T~~~~~~~~~~~~~~l-gk~pv~v~d 154 (160)
..+. ...+-- .++|....+-- =||.| .+++..+++..+++.+ ++.++.+.+
T Consensus 165 ~~g~~~~~d~~v--~~~Pe~~~~G~a~~~~~~~~~Iv~G--~~~~~~~~~~~ly~~~~~~~~~~~~~ 227 (478)
T 3g79_A 165 ESGLKAGEDFAL--AHAPERVMVGRLLKNIREHDRIVGG--IDEASTKRAVELYSPVLTVGQVIPMS 227 (478)
T ss_dssp HHCCCBTTTBEE--EECCCCCCTTSHHHHHHHSCEEEEE--SSHHHHHHHHHHHGGGCSSCCEEEEE
T ss_pred hcCCCcCCceeE--EeCCccCCccchhhhhcCCcEEEEe--CCHHHHHHHHHHHhhhccCCeEEeCC
Confidence 1111 112211 25675544311 24533 3677789999999999 888887754
No 88
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=96.04 E-value=0.0093 Score=48.85 Aligned_cols=113 Identities=12% Similarity=0.063 Sum_probs=71.1
Q ss_pred CceecCChhhhcCCCcEEEEeccCChHHHHHHHHH----HhhhCCC-CcEEeecCCCCCHHH---HhcccC--CCCcEEE
Q psy3942 40 RIKGSSKVEDSVSQSDLVIEAIVENMDIKHKLFTS----VDKIAPA-SAILASNTSSLSITE---IASVTN--RKDKFVG 109 (160)
Q Consensus 40 ~i~~~~~~~~al~~adlViEav~E~l~~K~~v~~~----l~~~~~~-~~iiasnTS~l~i~~---la~~~~--~p~r~ig 109 (160)
++..++++++++.++|+||.|++. ....+++.+ |...+++ +++|.+.+.++++.. ++..+. .|.....
T Consensus 72 ~~~~~~~~~~~~~~aDvVilav~~--~~~~~v~~~~~~gl~~~l~~~~~ivv~~~~gi~~~~~~~~~~~l~~~~~~~~~~ 149 (366)
T 1evy_A 72 NITFTSDVEKAYNGAEIILFVIPT--QFLRGFFEKSGGNLIAYAKEKQVPVLVCTKGIERSTLKFPAEIIGEFLPSPLLS 149 (366)
T ss_dssp TEEEESCHHHHHTTCSSEEECCCH--HHHHHHHHHHCHHHHHHHHHHTCCEEECCCSCCTTTCCCHHHHHTTTSCGGGEE
T ss_pred ceeeeCCHHHHHcCCCEEEECCCh--HHHHHHHHHhHHHHHHhcCccCCEEEEECCcCCCccccCHHHHHHHHCCCCcEE
Confidence 467778887678999999999996 567788988 8888888 888888777766531 111111 1211111
Q ss_pred eecCCCCCCC-----ceEEEecCCCCCHHHHHHHHHHHHHc--CCeEEEecCcC
Q psy3942 110 LHFFNPVPMM-----KLLEVIRTNDTSDATYNAVTEWGKSI--GKTTIVCKDTP 156 (160)
Q Consensus 110 ~Hf~~P~~~~-----~lVEvv~~~~T~~~~~~~~~~~~~~l--gk~pv~v~d~p 156 (160)
....|.... ...-++.+ ..+++..+.+..++..+ |..+....|..
T Consensus 150 -v~~gp~~~~~~~~g~~~~~~~~-~~~~~~~~~v~~ll~~~g~g~~~~~~~di~ 201 (366)
T 1evy_A 150 -VLAGPSFAIEVATGVFTCVSIA-SADINVARRLQRIMSTGDRSFVCWATTDTV 201 (366)
T ss_dssp -EEESSCCHHHHHTTCCEEEEEE-CSSHHHHHHHHHHHSCTTSSEEEEEESCHH
T ss_pred -EEeCCChHHHHHhCCceEEEEe-cCCHHHHHHHHHHhcCCCCeEEEEEcCCch
Confidence 123343311 11122222 34678889999999999 87766666643
No 89
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=95.99 E-value=0.0041 Score=51.09 Aligned_cols=70 Identities=16% Similarity=0.320 Sum_probs=49.2
Q ss_pred CceecCChhhhcCCCcEEEEec--------------cCChHHHHHHHHHHhhhCCCCcE--EeecCCCCCHHHHhcccCC
Q psy3942 40 RIKGSSKVEDSVSQSDLVIEAI--------------VENMDIKHKLFTSVDKIAPASAI--LASNTSSLSITEIASVTNR 103 (160)
Q Consensus 40 ~i~~~~~~~~al~~adlViEav--------------~E~l~~K~~v~~~l~~~~~~~~i--iasnTS~l~i~~la~~~~~ 103 (160)
+++.++++ +++++||+||-++ ..|..+-+++..++.+.+ |+++ +.||...+-..-+....+.
T Consensus 61 ~v~~t~d~-~a~~~aDvVIi~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~-p~a~vivvtNPvd~~t~~~~k~sg~ 138 (321)
T 3p7m_A 61 KVRGTNDY-KDLENSDVVIVTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHNC-PNAFVICITNPLDIMVNMLQKFSGV 138 (321)
T ss_dssp CEEEESCG-GGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEECCSSHHHHHHHHHHHHCC
T ss_pred EEEEcCCH-HHHCCCCEEEEcCCcCCCCCCCHHHHHHHhHHHHHHHHHHHHHHC-CCcEEEEecCchHHHHHHHHHhcCC
Confidence 56666788 5899999999995 235678899999999998 6665 3466555433333334455
Q ss_pred C-CcEEEee
Q psy3942 104 K-DKFVGLH 111 (160)
Q Consensus 104 p-~r~ig~H 111 (160)
| .|++|+.
T Consensus 139 p~~rviG~~ 147 (321)
T 3p7m_A 139 PDNKIVGMA 147 (321)
T ss_dssp CGGGEEEEC
T ss_pred CHHHEEeec
Confidence 4 7888875
No 90
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=95.94 E-value=0.019 Score=46.52 Aligned_cols=87 Identities=20% Similarity=0.265 Sum_probs=57.6
Q ss_pred cCceecCChhhhcCCCcEEEEeccC--------------ChHHHHHHHHHHhhhCCCCcE--EeecCCCCCHHHH---hc
Q psy3942 39 SRIKGSSKVEDSVSQSDLVIEAIVE--------------NMDIKHKLFTSVDKIAPASAI--LASNTSSLSITEI---AS 99 (160)
Q Consensus 39 ~~i~~~~~~~~al~~adlViEav~E--------------~l~~K~~v~~~l~~~~~~~~i--iasnTS~l~i~~l---a~ 99 (160)
.+++.++|++ ++++||+||.|++- |..+.+++.+.+.+.+ |+++ +.|| |+.-+ ..
T Consensus 56 ~~i~~t~d~~-~l~~aDvViiav~~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-~~~~viv~tN----P~~~~~~~~~ 129 (310)
T 1guz_A 56 TKVTGSNDYA-DTANSDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHS-KNPIIIVVSN----PLDIMTHVAW 129 (310)
T ss_dssp CEEEEESCGG-GGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-SSCEEEECCS----SHHHHHHHHH
T ss_pred cEEEECCCHH-HHCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCcEEEEEcC----chHHHHHHHH
Confidence 4577888995 59999999999952 1366789999999997 5553 4455 44433 32
Q ss_pred c-cC-CCCcEEEeecCCCCCCCceEEEecCCCCCHHHHHHHHHHHHHcCCeE
Q psy3942 100 V-TN-RKDKFVGLHFFNPVPMMKLLEVIRTNDTSDATYNAVTEWGKSIGKTT 149 (160)
Q Consensus 100 ~-~~-~p~r~ig~Hf~~P~~~~~lVEvv~~~~T~~~~~~~~~~~~~~lgk~p 149 (160)
. .. .|+|++|+ .|.-++......+++.+|..|
T Consensus 130 ~~~~~~~~rviG~------------------gt~ld~~r~~~~la~~l~v~~ 163 (310)
T 1guz_A 130 VRSGLPKERVIGM------------------AGVLDAARFRSFIAMELGVSM 163 (310)
T ss_dssp HHHCSCGGGEEEE------------------CHHHHHHHHHHHHHHHHTCCG
T ss_pred HhcCCChHHEEEC------------------CCchHHHHHHHHHHHHhCCCH
Confidence 2 22 36799998 455455555555667777644
No 91
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=95.73 E-value=0.0047 Score=53.28 Aligned_cols=104 Identities=9% Similarity=0.063 Sum_probs=70.9
Q ss_pred CceecCChhhhcCC---CcEEEEeccCChHHHHHHHHHHhhhCCCCcEEeecCCCCCH--HHHhcccC-CCCcEEEeecC
Q psy3942 40 RIKGSSKVEDSVSQ---SDLVIEAIVENMDIKHKLFTSVDKIAPASAILASNTSSLSI--TEIASVTN-RKDKFVGLHFF 113 (160)
Q Consensus 40 ~i~~~~~~~~al~~---adlViEav~E~l~~K~~v~~~l~~~~~~~~iiasnTS~l~i--~~la~~~~-~p~r~ig~Hf~ 113 (160)
.+..++++++++++ +|+||-|+|....++ +++.+|...++++++|.+.+.+.+. .++++.+. ..-+++++--.
T Consensus 62 gi~~~~s~~e~v~~l~~aDvVil~Vp~~~~v~-~vl~~l~~~l~~g~iIId~s~g~~~~t~~l~~~l~~~g~~~v~~pv~ 140 (480)
T 2zyd_A 62 KLVPYYTVKEFVESLETPRRILLMVKAGAGTD-AAIDSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAEGFNFIGTGVS 140 (480)
T ss_dssp CEEECSSHHHHHHTBCSSCEEEECSCSSSHHH-HHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred CeEEeCCHHHHHhCCCCCCEEEEECCCHHHHH-HHHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHCCCCeeCCccc
Confidence 57778888766766 999999999976666 5668898889888888866666643 45655443 23345544222
Q ss_pred CCCC---CCceEEEecCCCCCHHHHHHHHHHHHHcCCe
Q psy3942 114 NPVP---MMKLLEVIRTNDTSDATYNAVTEWGKSIGKT 148 (160)
Q Consensus 114 ~P~~---~~~lVEvv~~~~T~~~~~~~~~~~~~~lgk~ 148 (160)
..+. ..+ . ++.|. +++.++.+..+++.+|+.
T Consensus 141 gg~~~a~~g~-~-i~~gg--~~~~~~~v~~ll~~~g~~ 174 (480)
T 2zyd_A 141 GGEEGALKGP-S-IMPGG--QKEAYELVAPILTKIAAV 174 (480)
T ss_dssp SHHHHHHHCC-E-EEEES--CHHHHHHHHHHHHHHSCB
T ss_pred cCHhHHhcCC-e-EEecC--CHHHHHHHHHHHHHHhcc
Confidence 1111 122 2 55543 589999999999999987
No 92
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=95.68 E-value=0.0071 Score=52.01 Aligned_cols=70 Identities=21% Similarity=0.285 Sum_probs=45.7
Q ss_pred cCceecCChhhhcCCCcEEEEecc------------------------C------------ChHHHHHHHHHHhhhCCCC
Q psy3942 39 SRIKGSSKVEDSVSQSDLVIEAIV------------------------E------------NMDIKHKLFTSVDKIAPAS 82 (160)
Q Consensus 39 ~~i~~~~~~~~al~~adlViEav~------------------------E------------~l~~K~~v~~~l~~~~~~~ 82 (160)
.+|+.|+|+++|++|||+||++++ | +..+=+++..++.+.|| +
T Consensus 61 ~~I~~TtD~~eAl~dADfVI~airvG~~~~~~~De~ip~k~G~~~~vget~g~GGi~~alr~~~i~~~i~~~i~~~~p-~ 139 (450)
T 3fef_A 61 WRYEAVSTLKKALSAADIVIISILPGSLDDMEVDVHLPERCGIYQSVGDTVGPGGIIRGLRAVPIFAEIARAIRDYAP-E 139 (450)
T ss_dssp EEEEEESSHHHHHTTCSEEEECCCSSCHHHHHHHHHGGGGGTCCCSSCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCT-T
T ss_pred CeEEEECCHHHHhcCCCEEEeccccCCcccchhhhhhhhccCccccchhhcCCchhhcccccHHHHHHHHHHHHHHCC-C
Confidence 578899999889999999999995 1 12235667788888884 5
Q ss_pred cEEe--ecCCCCCHHHHhcccCCCCcEEEe
Q psy3942 83 AILA--SNTSSLSITEIASVTNRKDKFVGL 110 (160)
Q Consensus 83 ~iia--snTS~l~i~~la~~~~~p~r~ig~ 110 (160)
+++. ||-..+ ++.......-+.|++|+
T Consensus 140 a~~i~~tNPvdi-~t~~~~k~~p~~rviG~ 168 (450)
T 3fef_A 140 SWVINYTNPMSV-CTRVLYKVFPGIKAIGC 168 (450)
T ss_dssp SEEEECCSSHHH-HHHHHHHHCTTCEEEEC
T ss_pred eEEEEecCchHH-HHHHHHHHCCCCCEEEe
Confidence 5443 665543 33333222123577776
No 93
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=95.52 E-value=0.045 Score=44.40 Aligned_cols=114 Identities=9% Similarity=0.134 Sum_probs=72.8
Q ss_pred CceecCChhhhcCCCcEEEEeccCChHHHHHHHHHHhhhCCCCcEEeecCCCCC-------------------HH-HHhc
Q psy3942 40 RIKGSSKVEDSVSQSDLVIEAIVENMDIKHKLFTSVDKIAPASAILASNTSSLS-------------------IT-EIAS 99 (160)
Q Consensus 40 ~i~~~~~~~~al~~adlViEav~E~l~~K~~v~~~l~~~~~~~~iiasnTS~l~-------------------i~-~la~ 99 (160)
++..+++++ ++.++|+||-|++- ..++ +++++|...++++++|.|.+.+++ .. .|..
T Consensus 58 ~~~~~~~~~-~~~~~D~Vilavk~-~~~~-~~~~~l~~~l~~~~~iv~~~nGi~~~~~~~~g~~~~~~~~~~~~~~~l~~ 134 (335)
T 3ghy_A 58 PVRATHDAA-ALGEQDVVIVAVKA-PALE-SVAAGIAPLIGPGTCVVVAMNGVPWWFFDRPGPLQGQRLQAVDPHGRIAQ 134 (335)
T ss_dssp CCEEESCHH-HHCCCSEEEECCCH-HHHH-HHHGGGSSSCCTTCEEEECCSSSCTTTTCSSSTTTTCCCTTTCTTSHHHH
T ss_pred eeeEECCHH-HcCCCCEEEEeCCc-hhHH-HHHHHHHhhCCCCCEEEEECCCCccccccccccccccccccCCcHHHHHH
Confidence 456677885 57999999999998 3555 888999999999999998777753 12 3444
Q ss_pred ccCCCCcEEEe------ecCCCCCCCc--eEEEecCC--CCCHHHHHHHHHHHHHcCCeEEEecCcCc
Q psy3942 100 VTNRKDKFVGL------HFFNPVPMMK--LLEVIRTN--DTSDATYNAVTEWGKSIGKTTIVCKDTPG 157 (160)
Q Consensus 100 ~~~~p~r~ig~------Hf~~P~~~~~--lVEvv~~~--~T~~~~~~~~~~~~~~lgk~pv~v~d~pG 157 (160)
.+. +.++++. ....|-+... .-.++-|. ...++..+.+.+++...|.......|.-+
T Consensus 135 ~~~-~~~v~~gv~~~~a~~~~pg~v~~~~~g~~~iG~~~~~~~~~~~~l~~~l~~~g~~~~~~~di~~ 201 (335)
T 3ghy_A 135 AIP-TRHVLGCVVHLTCATVSPGHIRHGNGRRLILGEPAGGASPRLASIAALFGRAGLQAECSEAIQR 201 (335)
T ss_dssp HSC-GGGEEEEEECCCEEESSTTEEEECSCCEEEEECTTCSCCHHHHHHHHHHHHTTCEEEECSCHHH
T ss_pred hcC-cccEEEEEEEEEEEEcCCcEEEECCCCeEEEecCCCCcCHHHHHHHHHHHhCCCCcEeCchHHH
Confidence 442 3465532 2222322100 00133332 33456778888999999987776666543
No 94
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=95.52 E-value=0.0079 Score=49.46 Aligned_cols=71 Identities=17% Similarity=0.282 Sum_probs=50.1
Q ss_pred cCceecCChhhhcCCCcEEEEecc--------------CChHHHHHHHHHHhhhCCCCcE--EeecCCCCCHHHHhcccC
Q psy3942 39 SRIKGSSKVEDSVSQSDLVIEAIV--------------ENMDIKHKLFTSVDKIAPASAI--LASNTSSLSITEIASVTN 102 (160)
Q Consensus 39 ~~i~~~~~~~~al~~adlViEav~--------------E~l~~K~~v~~~l~~~~~~~~i--iasnTS~l~i~~la~~~~ 102 (160)
.+|..++|+ +++++||+||-++. .|..+-+++..++.+.+ |+++ +.||-..+-..-+.....
T Consensus 62 ~~v~~t~d~-~a~~~aDiVIiaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~-p~a~iivvtNPvd~~t~~~~k~sg 139 (324)
T 3gvi_A 62 AKFTGANDY-AAIEGADVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYA-PEAFVICITNPLDAMVWALQKFSG 139 (324)
T ss_dssp CCEEEESSG-GGGTTCSEEEECCSCCCC-----CHHHHHHHHHHHHHHHHHHHHC-TTCEEEECCSSHHHHHHHHHHHHC
T ss_pred CEEEEeCCH-HHHCCCCEEEEccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHHC-CCeEEEecCCCcHHHHHHHHHhcC
Confidence 457777888 68999999999863 25577889999999998 6665 457765544333333444
Q ss_pred CC-CcEEEee
Q psy3942 103 RK-DKFVGLH 111 (160)
Q Consensus 103 ~p-~r~ig~H 111 (160)
.| .|++|+.
T Consensus 140 ~p~~rviG~~ 149 (324)
T 3gvi_A 140 LPAHKVVGMA 149 (324)
T ss_dssp CCGGGEEECC
T ss_pred CCHHHEEeec
Confidence 44 6888875
No 95
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=95.48 E-value=0.021 Score=44.39 Aligned_cols=104 Identities=23% Similarity=0.217 Sum_probs=64.3
Q ss_pred cCChhhhcCCCcEEEEeccCChHHHHHHHHHH-hhhCCCCcEEeecCCCC----------------CH-HHHhcccCCCC
Q psy3942 44 SSKVEDSVSQSDLVIEAIVENMDIKHKLFTSV-DKIAPASAILASNTSSL----------------SI-TEIASVTNRKD 105 (160)
Q Consensus 44 ~~~~~~al~~adlViEav~E~l~~K~~v~~~l-~~~~~~~~iiasnTS~l----------------~i-~~la~~~~~p~ 105 (160)
.++..++++++|+||-|+|..... +++.++ .... ++++|.+.+.++ .+ ..+.+.+. ..
T Consensus 81 ~~~~~e~~~~aDvVilavp~~~~~--~~~~~i~~~~l-~g~ivi~~s~~~~~~~G~~~t~~~~~~~~~~~~l~~~l~-~~ 156 (245)
T 3dtt_A 81 LAAFADVAAGAELVVNATEGASSI--AALTAAGAENL-AGKILVDIANPLDFSHGMPPTLNPVNTDSLGEQIQRTFP-EA 156 (245)
T ss_dssp EEEHHHHHHHCSEEEECSCGGGHH--HHHHHHCHHHH-TTSEEEECCCCEECTTCSSCEESSCSSCCHHHHHHHHST-TS
T ss_pred ccCHHHHHhcCCEEEEccCcHHHH--HHHHHhhhhhc-CCCEEEECCCCCCCcCCccccccCCCCccHHHHHHHHCC-CC
Confidence 445556789999999999987544 455566 4444 677776655322 33 34555553 24
Q ss_pred cEE-EeecCC------CCC--CCceEEEecCCCCCHHHHHHHHHHHHHcCCeE-EEec
Q psy3942 106 KFV-GLHFFN------PVP--MMKLLEVIRTNDTSDATYNAVTEWGKSIGKTT-IVCK 153 (160)
Q Consensus 106 r~i-g~Hf~~------P~~--~~~lVEvv~~~~T~~~~~~~~~~~~~~lgk~p-v~v~ 153 (160)
+++ |++|.. |.. ..++.=++.|. +++..+.+..++..+|+.+ +.+.
T Consensus 157 ~vv~~~~~~~a~v~~~~~~a~~g~~~~~v~g~--d~~~~~~v~~ll~~~g~~~~~~~G 212 (245)
T 3dtt_A 157 KVVKTLNTMNASLMVDPGRAAGGDHSVFVSGN--DAAAKAEVATLLKSLGHQDVIDLG 212 (245)
T ss_dssp EEEECSTTSCHHHHHCGGGTGGGCCCEEEECS--CHHHHHHHHHHHHHTTCCCEEEEE
T ss_pred eEEEeecccCHHHhcCccccCCCCeeEEEECC--CHHHHHHHHHHHHHcCCCceeccC
Confidence 655 455432 111 12333334443 7899999999999999876 4454
No 96
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=95.32 E-value=0.00054 Score=59.44 Aligned_cols=24 Identities=17% Similarity=0.425 Sum_probs=21.2
Q ss_pred cCceecCChhhhcCCCcEEEEecc
Q psy3942 39 SRIKGSSKVEDSVSQSDLVIEAIV 62 (160)
Q Consensus 39 ~~i~~~~~~~~al~~adlViEav~ 62 (160)
.+|+.++|++++++|||+||++++
T Consensus 63 ~~I~~ttD~~eal~dAD~VIiaag 86 (480)
T 1obb_A 63 LKFEKTMNLDDVIIDADFVINTAM 86 (480)
T ss_dssp CEEEEESCHHHHHTTCSEEEECCC
T ss_pred cEEEEECCHHHHhCCCCEEEECCC
Confidence 578889999778999999999993
No 97
>2b0j_A 5,10-methenyltetrahydromethanopterin hydrogenase; rossmann fold, helix bundle, oxidoreductase; 1.75A {Methanocaldococcus jannaschii} SCOP: a.100.1.11 c.2.1.6 PDB: 3f47_A* 3daf_A* 3dag_A* 3f46_A* 3h65_A*
Probab=95.31 E-value=0.11 Score=42.62 Aligned_cols=111 Identities=20% Similarity=0.204 Sum_probs=79.0
Q ss_pred cCceecCChhhhcCCCcEEEEeccCChHHHHHHHHHHhhhCCCCcEEeecCCCCCHHHHhc---ccCCCC-cEEEeecCC
Q psy3942 39 SRIKGSSKVEDSVSQSDLVIEAIVENMDIKHKLFTSVDKIAPASAILASNTSSLSITEIAS---VTNRKD-KFVGLHFFN 114 (160)
Q Consensus 39 ~~i~~~~~~~~al~~adlViEav~E~l~~K~~v~~~l~~~~~~~~iiasnTS~l~i~~la~---~~~~p~-r~ig~Hf~~ 114 (160)
..+.+++|=.+|++++|++|==.|- -..--+|.+++-..+++++||+ ||-++|...|.. .++|.+ .+..+|+-.
T Consensus 127 aGVkVtsDD~EAvk~AEi~IlftPf-G~~t~~Iakkii~~lpEgAII~-nTCTipp~~ly~~le~l~R~DvgIsS~HPaa 204 (358)
T 2b0j_A 127 VGLKVTSDDREAVEGADIVITWLPK-GNKQPDIIKKFADAIPEGAIVT-HACTIPTTKFAKIFKDLGREDLNITSYHPGC 204 (358)
T ss_dssp GTCEEESCHHHHHTTCSEEEECCTT-CTTHHHHHHHHGGGSCTTCEEE-ECSSSCHHHHHHHHHHTTCTTSEEEECBCSS
T ss_pred cCcEeecchHHHhcCCCEEEEecCC-CCCcHHHHHHHHhhCcCCCEEe-cccCCCHHHHHHHHHHhCcccCCeeccCCCC
Confidence 3566655544799999999988887 3345689999999999999987 455666665554 455554 455556554
Q ss_pred CCCCCceEEEecCCCCCHHHHHHHHHHHHHcCCeEEEe
Q psy3942 115 PVPMMKLLEVIRTNDTSDATYNAVTEWGKSIGKTTIVC 152 (160)
Q Consensus 115 P~~~~~lVEvv~~~~T~~~~~~~~~~~~~~lgk~pv~v 152 (160)
=|-+ .-=........+++.+++...|+++.||.+.++
T Consensus 205 VPgt-~Gq~~~g~~yAtEEqIeklveLaksa~k~ay~v 241 (358)
T 2b0j_A 205 VPEM-KGQVYIAEGYASEEAVNKLYEIGKIARGKAFKM 241 (358)
T ss_dssp CTTT-CCCEEEEESSSCHHHHHHHHHHHHHHHSCEEEE
T ss_pred CCCC-CCccccccccCCHHHHHHHHHHHHHhCCCeEec
Confidence 3332 222334556677888999999999999999987
No 98
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=95.27 E-value=0.017 Score=49.61 Aligned_cols=105 Identities=10% Similarity=0.096 Sum_probs=69.8
Q ss_pred CceecCChhhhc---CCCcEEEEeccCChHHHHHHHHHHhhhCCCCcEEeecCCCCCH--HHHhcccCC-CCcEEEeecC
Q psy3942 40 RIKGSSKVEDSV---SQSDLVIEAIVENMDIKHKLFTSVDKIAPASAILASNTSSLSI--TEIASVTNR-KDKFVGLHFF 113 (160)
Q Consensus 40 ~i~~~~~~~~al---~~adlViEav~E~l~~K~~v~~~l~~~~~~~~iiasnTS~l~i--~~la~~~~~-p~r~ig~Hf~ 113 (160)
.+..++++++.+ +++|+||.|+|....++. ++.+|...++++++|.+.+.+.+. .++...+.. .-+++++..+
T Consensus 50 gi~~~~~~~e~v~~l~~aDvVilaVp~~~~v~~-vl~~l~~~l~~g~iII~~s~~~~~~~~~l~~~l~~~g~~~v~~pv~ 128 (482)
T 2pgd_A 50 KVLGAHSLEEMVSKLKKPRRIILLVKAGQAVDN-FIEKLVPLLDIGDIIIDGGNSEYRDTMRRCRDLKDKGILFVGSGVS 128 (482)
T ss_dssp SCEECSSHHHHHHHBCSSCEEEECSCTTHHHHH-HHHHHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred CeEEeCCHHHHHhhccCCCEEEEeCCChHHHHH-HHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEeCCCCC
Confidence 467788886654 499999999999877774 667888888888888766655553 355554432 2345555433
Q ss_pred CCCC---CCceEEEecCCCCCHHHHHHHHHHHHHcCCeE
Q psy3942 114 NPVP---MMKLLEVIRTNDTSDATYNAVTEWGKSIGKTT 149 (160)
Q Consensus 114 ~P~~---~~~lVEvv~~~~T~~~~~~~~~~~~~~lgk~p 149 (160)
.++. ..+. ++.|. +++.++.+..+++.+|+.+
T Consensus 129 g~~~~a~~g~~--i~~gg--~~e~~~~v~~ll~~~g~~v 163 (482)
T 2pgd_A 129 GGEDGARYGPS--LMPGG--NKEAWPHIKAIFQGIAAKV 163 (482)
T ss_dssp SHHHHHHHCCE--EEEEE--CTTTHHHHHHHHHHHSCBC
T ss_pred CChhhhccCCe--EEeCC--CHHHHHHHHHHHHHhhhhc
Confidence 2211 1112 23333 4778899999999999876
No 99
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=95.19 E-value=0.031 Score=44.78 Aligned_cols=69 Identities=20% Similarity=0.332 Sum_probs=46.5
Q ss_pred CceecCChhhhcCCCcEEEEecc--------------CChHHHHHHHHHHhhhCCCCcEEeecCCCCCHH-HHhcc-cCC
Q psy3942 40 RIKGSSKVEDSVSQSDLVIEAIV--------------ENMDIKHKLFTSVDKIAPASAILASNTSSLSIT-EIASV-TNR 103 (160)
Q Consensus 40 ~i~~~~~~~~al~~adlViEav~--------------E~l~~K~~v~~~l~~~~~~~~iiasnTS~l~i~-~la~~-~~~ 103 (160)
++..++++ ++++++|+||.|+. +|..++++++.++.+. .++++|.+-+-.+.+. .++.. ...
T Consensus 63 ~v~~~~~~-~~~~~aD~Vii~v~~~~~~g~~r~~~~~~n~~~~~~~~~~i~~~-~~~~~vi~~~Np~~~~~~~~~~~~~~ 140 (319)
T 1lld_A 63 SIDGSDDP-EICRDADMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKV-APNAIYMLITNPVDIATHVAQKLTGL 140 (319)
T ss_dssp EEEEESCG-GGGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTSEEEECCSSHHHHHHHHHHHHTC
T ss_pred EEEeCCCH-HHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCceEEEecCchHHHHHHHHHhcCC
Confidence 45555677 57999999999992 4568889999999997 5777776544343333 33321 123
Q ss_pred -CCcEEEe
Q psy3942 104 -KDKFVGL 110 (160)
Q Consensus 104 -p~r~ig~ 110 (160)
+.|++|+
T Consensus 141 ~~~~vig~ 148 (319)
T 1lld_A 141 PENQIFGS 148 (319)
T ss_dssp CTTSEEEC
T ss_pred CHHHEeec
Confidence 4688876
No 100
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=95.15 E-value=0.0084 Score=49.73 Aligned_cols=52 Identities=13% Similarity=0.275 Sum_probs=40.6
Q ss_pred cCceecCChhhhcCCCcEEEEec--------------cCChHHHHHHHHHHhhhCCCCc--EEeecCC
Q psy3942 39 SRIKGSSKVEDSVSQSDLVIEAI--------------VENMDIKHKLFTSVDKIAPASA--ILASNTS 90 (160)
Q Consensus 39 ~~i~~~~~~~~al~~adlViEav--------------~E~l~~K~~v~~~l~~~~~~~~--iiasnTS 90 (160)
.++++++++.++++|||+||-++ ..|..+.+++...+.+.+++.. ++.||-.
T Consensus 62 ~~i~~t~d~~~al~dADvVvitaG~p~kpG~~R~dLl~~N~~I~~~i~~~i~~~~p~a~~vlvvsNPv 129 (343)
T 3fi9_A 62 LNLTFTSDIKEALTDAKYIVSSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKSYCPDCKHVIIIFNPA 129 (343)
T ss_dssp CCCEEESCHHHHHTTEEEEEECCC-------CHHHHHHHHHHHHHHHHHHHHHHCTTCCEEEECSSSH
T ss_pred CceEEcCCHHHHhCCCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhccCcEEEEEecCch
Confidence 46788888877899999999874 3566788999999999996664 4567643
No 101
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=94.82 E-value=0.036 Score=48.47 Aligned_cols=101 Identities=15% Similarity=0.200 Sum_probs=78.9
Q ss_pred CChhhhcCCCcEEEEeccCChHHHHHHHHHHhhhCCCCcEEeecCCCCCHHHHhc-ccCCC--CcEEEeecCCCCCC---
Q psy3942 45 SKVEDSVSQSDLVIEAIVENMDIKHKLFTSVDKIAPASAILASNTSSLSITEIAS-VTNRK--DKFVGLHFFNPVPM--- 118 (160)
Q Consensus 45 ~~~~~al~~adlViEav~E~l~~K~~v~~~l~~~~~~~~iiasnTS~l~i~~la~-~~~~p--~r~ig~Hf~~P~~~--- 118 (160)
.++++++++||+|+=++|-... .+++.++...++++++| |-.+++++..+.+ ....| -+++-+|+-.|.+.
T Consensus 113 ~s~aEAa~~ADVVILaVP~~~~--~eVl~eI~p~LK~GaIL-s~AaGf~I~~le~~~i~~p~dv~VVrVmPNtPg~~VR~ 189 (525)
T 3fr7_A 113 GDIWETVSGSDLVLLLISDAAQ--ADNYEKIFSHMKPNSIL-GLSHGFLLGHLQSAGLDFPKNISVIAVCPKGMGPSVRR 189 (525)
T ss_dssp EEHHHHHHHCSEEEECSCHHHH--HHHHHHHHHHSCTTCEE-EESSSHHHHHHHHTTCCCCTTSEEEEEEESSCHHHHHH
T ss_pred CCHHHHHhcCCEEEECCChHHH--HHHHHHHHHhcCCCCeE-EEeCCCCHHHHhhhcccCCCCCcEEEEecCCCchhHHH
Confidence 5677789999999999998654 36899999999999995 8899999988875 22222 37999999888874
Q ss_pred ------------Cc-eEEEecCCCCCHHHHHHHHHHHHHcCCeEE
Q psy3942 119 ------------MK-LLEVIRTNDTSDATYNAVTEWGKSIGKTTI 150 (160)
Q Consensus 119 ------------~~-lVEvv~~~~T~~~~~~~~~~~~~~lgk~pv 150 (160)
++ ++-+ +...+.+..+.+.+++..+|...+
T Consensus 190 ~y~~G~~~~g~Gv~~liAv--~qd~tgea~e~alala~aiG~~~v 232 (525)
T 3fr7_A 190 LYVQGKEINGAGINSSFAV--HQDVDGRATDVALGWSVALGSPFT 232 (525)
T ss_dssp HHHHHTTSTTCSCCEEEEE--EECSSSCHHHHHHHHHHHTTCSEE
T ss_pred HHhcccccccCCccEEEEc--CCCCCHHHHHHHHHHHHHCCCCee
Confidence 55 4433 335566778999999999999754
No 102
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=94.79 E-value=0.016 Score=49.47 Aligned_cols=107 Identities=12% Similarity=0.083 Sum_probs=68.8
Q ss_pred hcCceecCChhhhcCCCcEEEEeccCChHH----------HHHHHHHHhhhCCCCcEEeecCCCCCHH---HHhccc--C
Q psy3942 38 LSRIKGSSKVEDSVSQSDLVIEAIVENMDI----------KHKLFTSVDKIAPASAILASNTSSLSIT---EIASVT--N 102 (160)
Q Consensus 38 l~~i~~~~~~~~al~~adlViEav~E~l~~----------K~~v~~~l~~~~~~~~iiasnTS~l~i~---~la~~~--~ 102 (160)
-+++++++|+ ++||+||=|||-.... =....+.+-+.+++++++. +.|++++. +++..+ .
T Consensus 72 ~g~l~~ttd~----~~aDvvii~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~g~iVV-~~STV~pgtt~~v~~~i~e~ 146 (431)
T 3ojo_A 72 SGKLKVSTTP----EASDVFIIAVPTPNNDDQYRSCDISLVMRALDSILPFLKKGNTII-VESTIAPKTMDDFVKPVIEN 146 (431)
T ss_dssp TTCEEEESSC----CCCSEEEECCCCCBCSSSSCBBCCHHHHHHHHHHGGGCCTTEEEE-ECSCCCTTHHHHTHHHHHHT
T ss_pred cCceEEeCch----hhCCEEEEEeCCCccccccCCccHHHHHHHHHHHHHhCCCCCEEE-EecCCChhHHHHHHHHHHHH
Confidence 3678998885 4899999999976632 2455677888888888665 44555543 333221 1
Q ss_pred CC----CcEEEeecCCCCCCCceE---------EEecCCCCCHHHHHHHHHHHHHcCCeEEEec
Q psy3942 103 RK----DKFVGLHFFNPVPMMKLL---------EVIRTNDTSDATYNAVTEWGKSIGKTTIVCK 153 (160)
Q Consensus 103 ~p----~r~ig~Hf~~P~~~~~lV---------Evv~~~~T~~~~~~~~~~~~~~lgk~pv~v~ 153 (160)
+. .++-- .++|....+-- =||.|. ++++.+++..+++.+++.++.+.
T Consensus 147 ~g~~~~~d~~v--~~~Pe~~~~G~A~~~~~~p~~Iv~G~--~~~~~~~~~~ly~~~~~~~~~~~ 206 (431)
T 3ojo_A 147 LGFTIGEDIYL--VHCPERVLPGKILEELVHNNRIIGGV--TKACIEAGKRVYRTFVQGEMIET 206 (431)
T ss_dssp TTCCBTTTEEE--EECCCCCCTTSHHHHHHHSCEEEEES--SHHHHHHHHHHHTTTCCSCEEEE
T ss_pred cCCCcCCCeEE--EECCCcCCCcchhhcccCCCEEEEeC--CHHHHHHHHHHHHHHhCCcEEeC
Confidence 11 12222 35675543321 355553 68999999999999999877764
No 103
>1up7_A 6-phospho-beta-glucosidase; hydrolase, family4 hydrolase, Na dependent; HET: G6P NAD; 2.4A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2 PDB: 1up6_A* 1up4_A
Probab=94.78 E-value=0.011 Score=50.33 Aligned_cols=69 Identities=28% Similarity=0.339 Sum_probs=46.9
Q ss_pred cCceecCChhhhcCCCcEEEEecc----------CCh------------------------HHHHHHHHHHhhhCCCCcE
Q psy3942 39 SRIKGSSKVEDSVSQSDLVIEAIV----------ENM------------------------DIKHKLFTSVDKIAPASAI 84 (160)
Q Consensus 39 ~~i~~~~~~~~al~~adlViEav~----------E~l------------------------~~K~~v~~~l~~~~~~~~i 84 (160)
.+|+.++|+.++++|||+||.++. |.+ .+=+++.+++.+.| +++
T Consensus 59 ~~v~~t~d~~~al~~AD~Viitagvg~~~~~~rd~~i~~k~glvgqeT~G~GGi~~~~rni~i~~~i~~~i~~~~--~A~ 136 (417)
T 1up7_A 59 FKVLISDTFEGAVVDAKYVIFQFRPGGLKGRENDEGIPLKYGLIGQETTGVGGFSAALRAFPIVEEYVDTVRKTS--NAT 136 (417)
T ss_dssp SEEEECSSHHHHHTTCSEEEECCCTTHHHHHHHHHHGGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHTT--CCE
T ss_pred eEEEEeCCHHHHhCCCCEEEEcCCCCCCCccchhhhhhhhcCcccccccccchhHHhhccHHHHHHHHHHHHHHC--CEE
Confidence 467778898678999999999992 111 23458889999999 665
Q ss_pred Ee--ecCCCCCHHHHhcccCCCCcEEEe
Q psy3942 85 LA--SNTSSLSITEIASVTNRKDKFVGL 110 (160)
Q Consensus 85 ia--snTS~l~i~~la~~~~~p~r~ig~ 110 (160)
+. ||-..+ +++.......+.|++|+
T Consensus 137 lin~TNPvdi-~t~a~~k~~p~~rviG~ 163 (417)
T 1up7_A 137 IVNFTNPSGH-ITEFVRNYLEYEKFIGL 163 (417)
T ss_dssp EEECSSSHHH-HHHHHHHTTCCSSEEEC
T ss_pred EEEeCChHHH-HHHHHHHhCCCCCEEEe
Confidence 44 666554 34444333323399997
No 104
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=94.49 E-value=0.041 Score=47.24 Aligned_cols=103 Identities=8% Similarity=0.060 Sum_probs=68.4
Q ss_pred ceecCChhhhcC---CCcEEEEeccCChHHHHHHHHHHhhhCCCCcEEeecCCCCC--HHHHhcccCC-CCcEEEeecCC
Q psy3942 41 IKGSSKVEDSVS---QSDLVIEAIVENMDIKHKLFTSVDKIAPASAILASNTSSLS--ITEIASVTNR-KDKFVGLHFFN 114 (160)
Q Consensus 41 i~~~~~~~~al~---~adlViEav~E~l~~K~~v~~~l~~~~~~~~iiasnTS~l~--i~~la~~~~~-p~r~ig~Hf~~ 114 (160)
+..++++++.++ ++|+|+.|+|....++. ++.+|...++++++|.+.+.+.+ ..++...+.. .-+++++....
T Consensus 53 i~~~~~~~e~v~~l~~aDvVilaVp~~~~v~~-vl~~l~~~l~~g~iIId~sng~~~~~~~l~~~l~~~g~~~v~~pv~g 131 (478)
T 1pgj_A 53 LKAFETMEAFAASLKKPRKALILVQAGAATDS-TIEQLKKVFEKGDILVDTGNAHFKDQGRRAQQLEAAGLRFLGMGISG 131 (478)
T ss_dssp EEECSCHHHHHHHBCSSCEEEECCCCSHHHHH-HHHHHHHHCCTTCEEEECCCCCHHHHHHHHHHHHTTTCEEEEEEEES
T ss_pred eEEECCHHHHHhcccCCCEEEEecCChHHHHH-HHHHHHhhCCCCCEEEECCCCChHHHHHHHHHHHHCCCeEEEeeccC
Confidence 677788866555 59999999999877664 56888888888888876555553 3456655432 23455543322
Q ss_pred CCC---CCceEEEecCCCCCHHHHHHHHHHHHHcCCe
Q psy3942 115 PVP---MMKLLEVIRTNDTSDATYNAVTEWGKSIGKT 148 (160)
Q Consensus 115 P~~---~~~lVEvv~~~~T~~~~~~~~~~~~~~lgk~ 148 (160)
++. ..+ =++.|. +++..+.+..+++.+|..
T Consensus 132 g~~~a~~g~--~i~~gg--~~~~~~~v~~ll~~~g~~ 164 (478)
T 1pgj_A 132 GEEGARKGP--AFFPGG--TLSVWEEIRPIVEAAAAK 164 (478)
T ss_dssp HHHHHHHCC--EEEEEE--CHHHHHHHHHHHHHHSCB
T ss_pred CHHHHhcCC--eEeccC--CHHHHHHHHHHHHHhccc
Confidence 211 112 134332 688999999999999987
No 105
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=94.25 E-value=0.041 Score=47.46 Aligned_cols=70 Identities=14% Similarity=0.272 Sum_probs=46.7
Q ss_pred cCceecCChhhhcCCCcEEEEeccCC----------------------------------hHHHHHHHHHHhhhCCCCcE
Q psy3942 39 SRIKGSSKVEDSVSQSDLVIEAIVEN----------------------------------MDIKHKLFTSVDKIAPASAI 84 (160)
Q Consensus 39 ~~i~~~~~~~~al~~adlViEav~E~----------------------------------l~~K~~v~~~l~~~~~~~~i 84 (160)
.+|+.++|++++++|||+||-+++=. ..+=+++.+++.+.| |+++
T Consensus 88 ~~I~~t~D~~eal~~AD~VViaag~~~~~g~~rd~~ip~k~g~~~~eT~G~ggl~~~~rni~i~~~i~~~i~~~~-P~A~ 166 (472)
T 1u8x_X 88 IEFAATTDPEEAFTDVDFVMAHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYS-PDAW 166 (472)
T ss_dssp SEEEEESCHHHHHSSCSEEEECCCTTHHHHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHC-TTCE
T ss_pred CEEEEECCHHHHHcCCCEEEEcCCCccccccchhhhhhhhcCcccccccCchhHHHHhhhHHHHHHHHHHHHHHC-CCeE
Confidence 46888899877899999999999641 123468889999998 5565
Q ss_pred Ee--ecCCCCCHHHHhcccCCCCcEEEe
Q psy3942 85 LA--SNTSSLSITEIASVTNRKDKFVGL 110 (160)
Q Consensus 85 ia--snTS~l~i~~la~~~~~p~r~ig~ 110 (160)
|. ||-..+ +++.......+.|++|+
T Consensus 167 ii~~TNPvdi-~T~~~~k~~p~~rViG~ 193 (472)
T 1u8x_X 167 MLNYSNPAAI-VAEATRRLRPNSKILNI 193 (472)
T ss_dssp EEECCSCHHH-HHHHHHHHSTTCCEEEC
T ss_pred EEEeCCcHHH-HHHHHHHhCCCCCEEEe
Confidence 55 443332 22333332334499997
No 106
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=93.79 E-value=0.014 Score=50.54 Aligned_cols=105 Identities=10% Similarity=0.127 Sum_probs=67.4
Q ss_pred CceecCChhhhcC---CCcEEEEeccCChHHHHHHHHHHhhhCCCCcEEeecCCCCCH--HHHhcccC-CCCcEEEeecC
Q psy3942 40 RIKGSSKVEDSVS---QSDLVIEAIVENMDIKHKLFTSVDKIAPASAILASNTSSLSI--TEIASVTN-RKDKFVGLHFF 113 (160)
Q Consensus 40 ~i~~~~~~~~al~---~adlViEav~E~l~~K~~v~~~l~~~~~~~~iiasnTS~l~i--~~la~~~~-~p~r~ig~Hf~ 113 (160)
++..++++++.++ ++|+|+-++|....++. ++.+|...++++.+|...+++.+. .+++..+. +--+++++-..
T Consensus 52 ~i~~~~s~~e~v~~l~~aDvVil~Vp~~~~v~~-vl~~l~~~L~~g~iIId~st~~~~~t~~~~~~l~~~Gi~fvd~pVs 130 (484)
T 4gwg_A 52 KVVGAQSLKEMVSKLKKPRRIILLVKAGQAVDD-FIEKLVPLLDTGDIIIDGGNSEYRDTTRRCRDLKAKGILFVGSGVS 130 (484)
T ss_dssp SCEECSSHHHHHHTBCSSCEEEECSCSSHHHHH-HHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred ceeccCCHHHHHhhccCCCEEEEecCChHHHHH-HHHHHHHhcCCCCEEEEcCCCCchHHHHHHHHHHhhccccccCCcc
Confidence 4566778765554 69999999999877664 678898999888888766666543 34444332 12234443211
Q ss_pred CCCC---CCceEEEecCCCCCHHHHHHHHHHHHHcCCeE
Q psy3942 114 NPVP---MMKLLEVIRTNDTSDATYNAVTEWGKSIGKTT 149 (160)
Q Consensus 114 ~P~~---~~~lVEvv~~~~T~~~~~~~~~~~~~~lgk~p 149 (160)
..+. ..+ =++.|. ++++++++..+++.+|..+
T Consensus 131 Gg~~gA~~G~--~im~GG--~~ea~~~v~pll~~ig~~v 165 (484)
T 4gwg_A 131 GGEEGARYGP--SLMPGG--NKEAWPHIKTIFQGIAAKV 165 (484)
T ss_dssp SHHHHHHHCC--EEEEEE--CGGGHHHHHHHHHHHSCBC
T ss_pred CCHHHHhcCC--eeecCC--CHHHHHHHHHHHHHhcCcc
Confidence 1000 111 133332 6889999999999999865
No 107
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=93.48 E-value=0.29 Score=38.52 Aligned_cols=109 Identities=8% Similarity=0.069 Sum_probs=69.4
Q ss_pred ceecCChhhhcCCCcEEEEeccCChHHHHHHHHHHhhhCCCCcEEeecCCCCCH-HHHhcccCCCCcEEEeecCCCCCCC
Q psy3942 41 IKGSSKVEDSVSQSDLVIEAIVENMDIKHKLFTSVDKIAPASAILASNTSSLSI-TEIASVTNRKDKFVGLHFFNPVPMM 119 (160)
Q Consensus 41 i~~~~~~~~al~~adlViEav~E~l~~K~~v~~~l~~~~~~~~iiasnTS~l~i-~~la~~~~~p~r~ig~Hf~~P~~~~ 119 (160)
+..+++. +++.++|+||=|++-.- + .+++.++.....++++|.+-+.++.. ..|+..+....-+.|+.++ ++...
T Consensus 72 ~~~~~~~-~~~~~~D~vil~vk~~~-~-~~v~~~i~~~l~~~~~iv~~~nG~~~~~~l~~~l~~~~v~~g~~~~-~a~~~ 147 (317)
T 2qyt_A 72 TCVTDNP-AEVGTVDYILFCTKDYD-M-ERGVAEIRPMIGQNTKILPLLNGADIAERMRTYLPDTVVWKGCVYI-SARKS 147 (317)
T ss_dssp SEEESCH-HHHCCEEEEEECCSSSC-H-HHHHHHHGGGEEEEEEEEECSCSSSHHHHHTTTSCTTTBCEEEEEE-EEEEE
T ss_pred ceEecCc-cccCCCCEEEEecCccc-H-HHHHHHHHhhcCCCCEEEEccCCCCcHHHHHHHCCCCcEEEEEEEE-EEEEc
Confidence 3344566 46789999999998765 3 67888998888888888877777877 4566666443222343332 22211
Q ss_pred ---ce-------EEEecC--CCCCHHHHHHHHHHHHHcCCeEEEecC
Q psy3942 120 ---KL-------LEVIRT--NDTSDATYNAVTEWGKSIGKTTIVCKD 154 (160)
Q Consensus 120 ---~l-------VEvv~~--~~T~~~~~~~~~~~~~~lgk~pv~v~d 154 (160)
.. .=++.. ...+++.. .+..++...|.......|
T Consensus 148 ~pg~~~~~~~g~~~~ig~~~~~~~~~~~-~~~~ll~~~g~~~~~~~d 193 (317)
T 2qyt_A 148 APGLITLEADRELFYFGSGLPEQTDDEV-RLAELLTAAGIRAYNPTD 193 (317)
T ss_dssp ETTEEEEEEEEEEEEEECCSSSCCHHHH-HHHHHHHHTTCCEECCSC
T ss_pred CCCEEEEcCCCceEEEcCCCCCCcCHHH-HHHHHHHHCCCCCEEchH
Confidence 00 111221 33456777 889999999987666555
No 108
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=93.31 E-value=0.32 Score=40.61 Aligned_cols=110 Identities=19% Similarity=0.213 Sum_probs=66.3
Q ss_pred cCceecCChhhhcCCCcEEEEeccCCh---------HHHHHHHHHHhhhCCCCcEEee-cCCCCCH-HHHhcccCCCCcE
Q psy3942 39 SRIKGSSKVEDSVSQSDLVIEAIVENM---------DIKHKLFTSVDKIAPASAILAS-NTSSLSI-TEIASVTNRKDKF 107 (160)
Q Consensus 39 ~~i~~~~~~~~al~~adlViEav~E~l---------~~K~~v~~~l~~~~~~~~iias-nTS~l~i-~~la~~~~~p~r~ 107 (160)
.++++++++.++++++|+||-|+|-.. ..-.++++.+.. +.++++|.. +|..... .+++..+... .+
T Consensus 59 ~~l~~t~~~~~~~~~aDvviiavpt~~~~~~~~~dl~~v~~v~~~i~~-l~~~~iVV~~ST~~~g~~~~l~~~~~~~-~v 136 (402)
T 1dlj_A 59 LSIKATLDSKAAYKEAELVIIATPTNYNSRINYFDTQHVETVIKEVLS-VNSHATLIIKSTIPIGFITEMRQKFQTD-RI 136 (402)
T ss_dssp CCEEEESCHHHHHHHCSEEEECCCCCEETTTTEECCHHHHHHHHHHHH-HCSSCEEEECSCCCTTHHHHHHHHTTCS-CE
T ss_pred CcEEEeCCHHHHhcCCCEEEEecCCCcccCCCCccHHHHHHHHHHHHh-hCCCCEEEEeCCCCccHHHHHHHHhCCC-eE
Confidence 367888888667899999999999874 256777888888 778887764 4544444 3566555322 22
Q ss_pred EEeecCCCCCCCce------EE---EecCCCCC-----HHHHHHHHHHHHHcC-C-e-EEEecC
Q psy3942 108 VGLHFFNPVPMMKL------LE---VIRTNDTS-----DATYNAVTEWGKSIG-K-T-TIVCKD 154 (160)
Q Consensus 108 ig~Hf~~P~~~~~l------VE---vv~~~~T~-----~~~~~~~~~~~~~lg-k-~-pv~v~d 154 (160)
+ ++|....+- .. |+-|.... .+..+.+..++...+ + . ++++.|
T Consensus 137 ~----~~Pe~~~~G~a~~~~~~~~riviG~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d 196 (402)
T 1dlj_A 137 I----FSPEFLRESKALYDNLYPSRIIVSCEENDSPKVKADAEKFALLLKSAAKKNNVPVLIMG 196 (402)
T ss_dssp E----ECCCCCCTTSTTHHHHSCSCEEEECCTTSCHHHHHHHHHHHHHHHHHCSCSCCCEEEEC
T ss_pred E----ECCccccCcchhhcccCCCEEEEeCCCcccchhHHHHHHHHHHHhhhhccCCceEEecC
Confidence 2 334433221 11 55554442 155566777776533 2 2 565544
No 109
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=93.28 E-value=0.1 Score=44.72 Aligned_cols=70 Identities=17% Similarity=0.301 Sum_probs=46.4
Q ss_pred cCceecCChhhhcCCCcEEEEeccCC----------------------------------hHHHHHHHHHHhhhCCCCcE
Q psy3942 39 SRIKGSSKVEDSVSQSDLVIEAIVEN----------------------------------MDIKHKLFTSVDKIAPASAI 84 (160)
Q Consensus 39 ~~i~~~~~~~~al~~adlViEav~E~----------------------------------l~~K~~v~~~l~~~~~~~~i 84 (160)
.+|+.++|+.++++|||+||-+++=. ..+=+++..++.+.| |+++
T Consensus 69 ~~i~~t~D~~eal~gAD~VVitagv~~~~~~~rd~~ip~~~g~~~~et~G~ggi~~~~rni~i~~~i~~~i~~~~-P~a~ 147 (450)
T 1s6y_A 69 IEIHLTLDRRRALDGADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELC-PDAW 147 (450)
T ss_dssp CEEEEESCHHHHHTTCSEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHC-TTCE
T ss_pred cEEEEeCCHHHHhCCCCEEEEcCCCCCCcchhhhhhhhhhcCcccccccccchHHHHhhhHHHHHHHHHHHHHHC-CCeE
Confidence 35777889867899999999999821 134568889999998 5565
Q ss_pred Ee--ecCCCCCHHHHhcccCCCCcEEEe
Q psy3942 85 LA--SNTSSLSITEIASVTNRKDKFVGL 110 (160)
Q Consensus 85 ia--snTS~l~i~~la~~~~~p~r~ig~ 110 (160)
|. ||-..+ +++.......+.|++|+
T Consensus 148 ii~~tNPvdi-vT~a~~k~~p~~rViG~ 174 (450)
T 1s6y_A 148 LINFTNPAGM-VTEAVLRYTKQEKVVGL 174 (450)
T ss_dssp EEECSSSHHH-HHHHHHHHCCCCCEEEC
T ss_pred EEEeCCcHHH-HHHHHHHhCCCCCEEEe
Confidence 54 443332 23333333323399997
No 110
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=92.71 E-value=1 Score=35.85 Aligned_cols=112 Identities=11% Similarity=0.111 Sum_probs=73.0
Q ss_pred CceecCChhhhcCCCcEEEEeccCChHHHHHHHHHHhhhCCCCcEEeecCCCCC-HHHHhcccCCCCcEEEee------c
Q psy3942 40 RIKGSSKVEDSVSQSDLVIEAIVENMDIKHKLFTSVDKIAPASAILASNTSSLS-ITEIASVTNRKDKFVGLH------F 112 (160)
Q Consensus 40 ~i~~~~~~~~al~~adlViEav~E~l~~K~~v~~~l~~~~~~~~iiasnTS~l~-i~~la~~~~~p~r~ig~H------f 112 (160)
.+..+++.+ ++.++|+||=|++-.-- .+++++|...++++++|.|..-++. ...|.+.+.. .++++.- .
T Consensus 57 ~~~~~~~~~-~~~~~D~vilavk~~~~--~~~l~~l~~~l~~~~~iv~l~nGi~~~~~l~~~~~~-~~v~~~~~~~~a~~ 132 (312)
T 3hn2_A 57 HVKGYRAPE-EIGPMDLVLVGLKTFAN--SRYEELIRPLVEEGTQILTLQNGLGNEEALATLFGA-ERIIGGVAFLCSNR 132 (312)
T ss_dssp CCCEESCHH-HHCCCSEEEECCCGGGG--GGHHHHHGGGCCTTCEEEECCSSSSHHHHHHHHTCG-GGEEEEEEEEECCB
T ss_pred eceeecCHH-HcCCCCEEEEecCCCCc--HHHHHHHHhhcCCCCEEEEecCCCCcHHHHHHHCCC-CcEEEEEEEeeeEE
Confidence 345567774 57899999999976542 2789999999999999999999997 4556665542 3554431 1
Q ss_pred CCCCCCC----ceEEEecCCCCCHHHHHHHHHHHHHcCCeEEEecCc
Q psy3942 113 FNPVPMM----KLLEVIRTNDTSDATYNAVTEWGKSIGKTTIVCKDT 155 (160)
Q Consensus 113 ~~P~~~~----~lVEvv~~~~T~~~~~~~~~~~~~~lgk~pv~v~d~ 155 (160)
..|-+.. .-+-+-..+..+.+..+.+.+++...|.......|.
T Consensus 133 ~~p~~v~~~~~g~~~ig~~~~~~~~~~~~l~~~l~~~g~~~~~~~di 179 (312)
T 3hn2_A 133 GEPGEVHHLGAGRIILGEFLPRDTGRIEELAAMFRQAGVDCRTTDDL 179 (312)
T ss_dssp CSSSEEEECEEEEEEEEESSCCCSHHHHHHHHHHHHTTCCEEECSCH
T ss_pred cCCcEEEECCCCeEEEecCCCCccHHHHHHHHHHHhCCCCcEEChHH
Confidence 2221110 012222223345667788889999989877666664
No 111
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=92.62 E-value=0.41 Score=38.36 Aligned_cols=114 Identities=8% Similarity=0.052 Sum_probs=73.2
Q ss_pred CceecCChhhhcCCCcEEEEeccCChHHHHHHHHHHhhhCCCCcEEeecCCCCCH-HHHhcccCCCCcEEEe-ecC----
Q psy3942 40 RIKGSSKVEDSVSQSDLVIEAIVENMDIKHKLFTSVDKIAPASAILASNTSSLSI-TEIASVTNRKDKFVGL-HFF---- 113 (160)
Q Consensus 40 ~i~~~~~~~~al~~adlViEav~E~l~~K~~v~~~l~~~~~~~~iiasnTS~l~i-~~la~~~~~p~r~ig~-Hf~---- 113 (160)
.+..+++.+++..++|+||=|++-.-- .+++++|...++++++|.|..-++.. ..|.+.+.. .++++. =|+
T Consensus 58 ~~~~~~~~~~~~~~~DlVilavK~~~~--~~~l~~l~~~l~~~t~Iv~~~nGi~~~~~l~~~~~~-~~vl~g~~~~~a~~ 134 (320)
T 3i83_A 58 PAAVVRSAAELETKPDCTLLCIKVVEG--ADRVGLLRDAVAPDTGIVLISNGIDIEPEVAAAFPD-NEVISGLAFIGVTR 134 (320)
T ss_dssp CSCEESCGGGCSSCCSEEEECCCCCTT--CCHHHHHTTSCCTTCEEEEECSSSSCSHHHHHHSTT-SCEEEEEEEEEEEE
T ss_pred eeeeECCHHHcCCCCCEEEEecCCCCh--HHHHHHHHhhcCCCCEEEEeCCCCChHHHHHHHCCC-CcEEEEEEEeceEE
Confidence 345567775444599999999987653 26889999999999999888888864 566666643 355442 222
Q ss_pred -CCCCCC--ceEEEecC--CCCCHHHHHHHHHHHHHcCCeEEEecCcC
Q psy3942 114 -NPVPMM--KLLEVIRT--NDTSDATYNAVTEWGKSIGKTTIVCKDTP 156 (160)
Q Consensus 114 -~P~~~~--~lVEvv~~--~~T~~~~~~~~~~~~~~lgk~pv~v~d~p 156 (160)
.|-... ..-.+.-| ...+.+..+.+.+++...|..+....|.-
T Consensus 135 ~~pg~v~~~~~~~~~ig~~~~~~~~~~~~l~~~l~~~~~~~~~~~di~ 182 (320)
T 3i83_A 135 TAPGEIWHQAYGRLMLGNYPGGVSERVKTLAAAFEEAGIDGIATENIT 182 (320)
T ss_dssp EETTEEEEEEEEEEEEEESSSCCCHHHHHHHHHHHHTTSCEEECSCHH
T ss_pred cCCCEEEECCCCEEEEecCCCCccHHHHHHHHHHHhCCCCceECHHHH
Confidence 221110 11123322 33445677888899999898776666643
No 112
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=91.82 E-value=0.099 Score=42.00 Aligned_cols=110 Identities=12% Similarity=0.162 Sum_probs=72.8
Q ss_pred ceecCChhhhcCCCcEEEEeccCChHHHHHHHHHHhhhCCCCcEEe-ecCCCCCHH-HHhcccCCCCcEEEeecCC-CCC
Q psy3942 41 IKGSSKVEDSVSQSDLVIEAIVENMDIKHKLFTSVDKIAPASAILA-SNTSSLSIT-EIASVTNRKDKFVGLHFFN-PVP 117 (160)
Q Consensus 41 i~~~~~~~~al~~adlViEav~E~l~~K~~v~~~l~~~~~~~~iia-snTS~l~i~-~la~~~~~p~r~ig~Hf~~-P~~ 117 (160)
.+..++..++++++|+||=++|.+-.++.-+...+-....++.++. .+|++...+ +++..+... |+||.. |+.
T Consensus 49 ~~~~~s~~e~~~~~dvvi~~l~~~~~~~~v~~~~~~~~~~~~~iiid~sT~~p~~~~~~~~~~~~~----g~~~ldapVs 124 (297)
T 4gbj_A 49 ATVVENAIDAITPGGIVFSVLADDAAVEELFSMELVEKLGKDGVHVSMSTISPETSRQLAQVHEWY----GAHYVGAPIF 124 (297)
T ss_dssp CEECSSGGGGCCTTCEEEECCSSHHHHHHHSCHHHHHHHCTTCEEEECSCCCHHHHHHHHHHHHHT----TCEEEECCEE
T ss_pred CeEeCCHHHHHhcCCceeeeccchhhHHHHHHHHHHhhcCCCeEEEECCCCChHHHHHHHHHHHhc----CCceecCCcC
Confidence 4667788788999999999999988887766677777777776554 344333222 555544321 345543 332
Q ss_pred CCc-------eEEEecCCCCCHHHHHHHHHHHHHcCCeEEEecCcCc
Q psy3942 118 MMK-------LLEVIRTNDTSDATYNAVTEWGKSIGKTTIVCKDTPG 157 (160)
Q Consensus 118 ~~~-------lVEvv~~~~T~~~~~~~~~~~~~~lgk~pv~v~d~pG 157 (160)
-.+ +. ++. .-++++++++..+++.+|+..+.+.+.+|
T Consensus 125 Gg~~~a~~g~l~-im~--gG~~~~~~~~~~~l~~~g~~i~~~g~~~G 168 (297)
T 4gbj_A 125 ARPEAVRAKVGN-ICL--SGNAGAKERIKPIVENFVKGVFDFGDDPG 168 (297)
T ss_dssp CCHHHHHHTCCE-EEE--EECHHHHHHHHHHHHTTCSEEEECCSCTT
T ss_pred CCccccccccce-eec--ccchhHHHHHHHHHHHhhCCeEEecCCcc
Confidence 211 22 222 33678999999999999998888876665
No 113
>3u95_A Glycoside hydrolase, family 4; hydrolysis, cytosol; 2.00A {Thermotoga neapolitana} PDB: 1vjt_A*
Probab=90.25 E-value=0.22 Score=42.83 Aligned_cols=22 Identities=9% Similarity=0.471 Sum_probs=19.6
Q ss_pred CceecCChhhhcCCCcEEEEec
Q psy3942 40 RIKGSSKVEDSVSQSDLVIEAI 61 (160)
Q Consensus 40 ~i~~~~~~~~al~~adlViEav 61 (160)
+|+.|+|+.+|++|||+||=++
T Consensus 63 ~i~~t~d~~eAl~gAD~Vi~~~ 84 (477)
T 3u95_A 63 KVVKTESLDEAIEGADFIINTA 84 (477)
T ss_dssp EEEEESCHHHHHTTCSEEEECC
T ss_pred EEEEeCCHHHHhCCCCEEEECc
Confidence 5788999988999999999876
No 114
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=90.07 E-value=0.44 Score=38.18 Aligned_cols=45 Identities=9% Similarity=0.149 Sum_probs=37.3
Q ss_pred eecCChhhhcCCCcEEEEeccCChHHHHHHHHHHhhhCCCCcEEeec
Q psy3942 42 KGSSKVEDSVSQSDLVIEAIVENMDIKHKLFTSVDKIAPASAILASN 88 (160)
Q Consensus 42 ~~~~~~~~al~~adlViEav~E~l~~K~~v~~~l~~~~~~~~iiasn 88 (160)
..++++++++.++|+||.|++.... .++++++...+++++++.+.
T Consensus 64 ~~~~~~~~~~~~~D~vi~~v~~~~~--~~~~~~l~~~l~~~~~vv~~ 108 (359)
T 1bg6_A 64 LLTSDIGLAVKDADVILIVVPAIHH--ASIAANIASYISEGQLIILN 108 (359)
T ss_dssp EEESCHHHHHTTCSEEEECSCGGGH--HHHHHHHGGGCCTTCEEEES
T ss_pred eecCCHHHHHhcCCEEEEeCCchHH--HHHHHHHHHhCCCCCEEEEc
Confidence 3567886678999999999998875 68999999999999866655
No 115
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=89.73 E-value=0.26 Score=39.69 Aligned_cols=108 Identities=12% Similarity=0.204 Sum_probs=69.8
Q ss_pred CceecCChhhhcCCCcEEEEeccCChHHHHHHHHH--HhhhCCCCcEEe-ecCCCCCHH-HHhcccCCCCcEEEeecCC-
Q psy3942 40 RIKGSSKVEDSVSQSDLVIEAIVENMDIKHKLFTS--VDKIAPASAILA-SNTSSLSIT-EIASVTNRKDKFVGLHFFN- 114 (160)
Q Consensus 40 ~i~~~~~~~~al~~adlViEav~E~l~~K~~v~~~--l~~~~~~~~iia-snTS~l~i~-~la~~~~~p~r~ig~Hf~~- 114 (160)
..+..++..++++++|+||=|+|.+-.++.=++.. +-+...++.+|. ++|++...+ +++..+... |+||..
T Consensus 46 Ga~~a~s~~e~~~~~dvv~~~l~~~~~v~~V~~~~~g~~~~~~~g~iiId~sT~~p~~~~~~a~~~~~~----G~~~lDa 121 (300)
T 3obb_A 46 GASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARER----GLAMLDA 121 (300)
T ss_dssp TCEECSSHHHHHTTCSEEEECCSCHHHHHHHHHSSSSSTTSCCC-CEEEECSCCCHHHHHHHHHHHHTT----TCEEEEC
T ss_pred CCEEcCCHHHHHhcCCceeecCCchHHHHHHHhchhhhhhcCCCCCEEEECCCCCHHHHHHHHHHHHHc----CCEEEec
Confidence 35667888788899999999999887776544432 334455555544 444443332 666655432 566664
Q ss_pred CCCCCc-------eEEEecCCCCCHHHHHHHHHHHHHcCCeEEEecC
Q psy3942 115 PVPMMK-------LLEVIRTNDTSDATYNAVTEWGKSIGKTTIVCKD 154 (160)
Q Consensus 115 P~~~~~-------lVEvv~~~~T~~~~~~~~~~~~~~lgk~pv~v~d 154 (160)
|+.-.+ |.=++.| +++++++++.+++.+|+..+.+.+
T Consensus 122 PVsGg~~~A~~G~L~imvGG---~~~~~~~~~p~l~~~g~~i~~~G~ 165 (300)
T 3obb_A 122 PVSGGTAGAAAGTLTFMVGG---DAEALEKARPLFEAMGRNIFHAGP 165 (300)
T ss_dssp CEESCHHHHHHTCEEEEEES---CHHHHHHHHHHHHHHEEEEEEEES
T ss_pred CCCCCHHHHHhCCEEEEEeC---CHHHHHHHHHHHHHhCCCEEEeCC
Confidence 433222 3333433 689999999999999999888854
No 116
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=88.57 E-value=0.078 Score=40.19 Aligned_cols=102 Identities=12% Similarity=0.109 Sum_probs=63.0
Q ss_pred ChhhhcCCCcEEEEeccCChHHHHHHHHHHhhhCCCCcEEeecCCCCCH--------HHHhcccCCCCcEEEeecCCCCC
Q psy3942 46 KVEDSVSQSDLVIEAIVENMDIKHKLFTSVDKIAPASAILASNTSSLSI--------TEIASVTNRKDKFVGLHFFNPVP 117 (160)
Q Consensus 46 ~~~~al~~adlViEav~E~l~~K~~v~~~l~~~~~~~~iiasnTS~l~i--------~~la~~~~~p~r~ig~Hf~~P~~ 117 (160)
+..++++++|+|+=|++-. .++ +++ ++... .++++|.+-+.+++. ..|.+.+.. .+++..=...|..
T Consensus 66 ~~~~~~~~aDvVilav~~~-~~~-~v~-~l~~~-~~~~ivI~~~~G~~~~~~~~~~~~~l~~~~~~-~~vvra~~n~~a~ 140 (201)
T 2yjz_A 66 CYSEAASRSDVIVLAVHRE-HYD-FLA-ELADS-LKGRVLIDVSNNQKMNQYPESNAEYLAQLVPG-AHVVKAFNTISAW 140 (201)
Confidence 5556788999999999964 443 444 45443 467888887777763 445444432 3443332222333
Q ss_pred CCc-eE------EEecCCCCCHHHHHHHHHHHHHcCCeEEEecC
Q psy3942 118 MMK-LL------EVIRTNDTSDATYNAVTEWGKSIGKTTIVCKD 154 (160)
Q Consensus 118 ~~~-lV------Evv~~~~T~~~~~~~~~~~~~~lgk~pv~v~d 154 (160)
... -. =++.|. +++..+.+..+++.+|+.++.+.+
T Consensus 141 ~~~~g~l~g~~~~~~~g~--~~~~~~~v~~ll~~~G~~~~~~G~ 182 (201)
T 2yjz_A 141 ALQSGTLDASRQVFVCGN--DSKAKDRVMDIARTLGLTPLDQGS 182 (201)
Confidence 221 00 133343 577889999999999999988744
No 117
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=87.17 E-value=0.22 Score=40.93 Aligned_cols=68 Identities=26% Similarity=0.380 Sum_probs=42.5
Q ss_pred CceecCChhhhcCCCcEEEEec--------------cCChHHHHHHHHHHhhhCCCCcEE--eecCCCCCHHHHh-cccC
Q psy3942 40 RIKGSSKVEDSVSQSDLVIEAI--------------VENMDIKHKLFTSVDKIAPASAIL--ASNTSSLSITEIA-SVTN 102 (160)
Q Consensus 40 ~i~~~~~~~~al~~adlViEav--------------~E~l~~K~~v~~~l~~~~~~~~ii--asnTS~l~i~~la-~~~~ 102 (160)
.+..++|++ ++++||+||=++ ..|..+-+++.+.+.+.|| ++++ .||-..+ ++.++ ....
T Consensus 75 ~i~~~~d~~-~~~~aDiVvi~aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p-~a~vlvvtNPvdi-~t~~~~k~sg 151 (331)
T 4aj2_A 75 KIVSSKDYS-VTANSKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSP-QCKLLIVSNPVDI-LTYVAWKISG 151 (331)
T ss_dssp EEEECSSGG-GGTTEEEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCT-TCEEEECSSSHHH-HHHHHHHHHC
T ss_pred eEEEcCCHH-HhCCCCEEEEccCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHCC-CeEEEEecChHHH-HHHHHHHHhC
Confidence 455678895 799999998554 2344667788889999864 5544 3654442 22222 2233
Q ss_pred C-CCcEEEe
Q psy3942 103 R-KDKFVGL 110 (160)
Q Consensus 103 ~-p~r~ig~ 110 (160)
. |.|++|+
T Consensus 152 ~p~~rviG~ 160 (331)
T 4aj2_A 152 FPKNRVIGS 160 (331)
T ss_dssp CCGGGEEEC
T ss_pred CCHHHEEee
Confidence 3 4578776
No 118
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=84.79 E-value=1.7 Score=36.56 Aligned_cols=52 Identities=12% Similarity=0.176 Sum_probs=44.3
Q ss_pred cCceecCChhhhcCCCcEEEEeccCChHHHHHHHHHHhhhCCCCcEEeecCCCC
Q psy3942 39 SRIKGSSKVEDSVSQSDLVIEAIVENMDIKHKLFTSVDKIAPASAILASNTSSL 92 (160)
Q Consensus 39 ~~i~~~~~~~~al~~adlViEav~E~l~~K~~v~~~l~~~~~~~~iiasnTS~l 92 (160)
.+|..++|++++++++|+||=+||=. .=+++++++....++++++.+.+=++
T Consensus 103 ~~i~~t~dl~~al~~ad~ii~avPs~--~~r~~l~~l~~~~~~~~~iv~~~KGi 154 (391)
T 4fgw_A 103 DNLVANPDLIDSVKDVDIIVFNIPHQ--FLPRICSQLKGHVDSHVRAISCLKGF 154 (391)
T ss_dssp SSEEEESCHHHHHTTCSEEEECSCGG--GHHHHHHHHTTTSCTTCEEEECCCSC
T ss_pred CCcEEeCCHHHHHhcCCEEEEECChh--hhHHHHHHhccccCCCceeEEecccc
Confidence 46888999988999999999999853 45789999999999999888877554
No 119
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=83.24 E-value=1.5 Score=35.53 Aligned_cols=50 Identities=12% Similarity=0.137 Sum_probs=35.6
Q ss_pred cCceecCChhhhcCCCcEEEEecc--------------CChHHHHHHHHHHhhhCCCCcE--Eeec
Q psy3942 39 SRIKGSSKVEDSVSQSDLVIEAIV--------------ENMDIKHKLFTSVDKIAPASAI--LASN 88 (160)
Q Consensus 39 ~~i~~~~~~~~al~~adlViEav~--------------E~l~~K~~v~~~l~~~~~~~~i--iasn 88 (160)
..++.++++.+++++||+||=++. -|..+-+++.+.+.+.+.|+++ +.||
T Consensus 69 ~~i~~~~~~~~al~~aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SN 134 (329)
T 1b8p_A 69 AGMTAHADPMTAFKDADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGN 134 (329)
T ss_dssp EEEEEESSHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred CcEEEecCcHHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccC
Confidence 356667887788999999997753 1234567888999999856654 3454
No 120
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=82.71 E-value=2 Score=34.60 Aligned_cols=68 Identities=16% Similarity=0.238 Sum_probs=41.3
Q ss_pred Ccee---cCChhhhcCCCcEEEEecc--CC------------hHHHHHHHHHHhhhCCCCcEEeecCCCCCHHHHh----
Q psy3942 40 RIKG---SSKVEDSVSQSDLVIEAIV--EN------------MDIKHKLFTSVDKIAPASAILASNTSSLSITEIA---- 98 (160)
Q Consensus 40 ~i~~---~~~~~~al~~adlViEav~--E~------------l~~K~~v~~~l~~~~~~~~iiasnTS~l~i~~la---- 98 (160)
+++. ++|+++++++||+||=++. .. ..+=+++.+.+.+.+ |++++.- .+-|+.-++
T Consensus 52 ~l~~~~~t~d~~~a~~~aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~viv--~sNPv~~~~~i~~ 128 (314)
T 1mld_A 52 TVKGYLGPEQLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHC-PDAMICI--ISNPVNSTIPITA 128 (314)
T ss_dssp EEEEEESGGGHHHHHTTCSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHC-TTSEEEE--CSSCHHHHHHHHH
T ss_pred eEEEecCCCCHHHHhCCCCEEEECCCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEE--ECCCcchhHHHHH
Confidence 3554 3688778999999998862 11 145667778888888 5554433 133554432
Q ss_pred ----cccCC-CCcEEEe
Q psy3942 99 ----SVTNR-KDKFVGL 110 (160)
Q Consensus 99 ----~~~~~-p~r~ig~ 110 (160)
..... |.|++|+
T Consensus 129 ~~~~~~~~~p~~rvig~ 145 (314)
T 1mld_A 129 EVFKKHGVYNPNKIFGV 145 (314)
T ss_dssp HHHHHTTCCCTTSEEEC
T ss_pred HHHHHcCCCCcceEEEe
Confidence 11222 5688876
No 121
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=82.06 E-value=1.5 Score=35.49 Aligned_cols=64 Identities=19% Similarity=0.259 Sum_probs=40.7
Q ss_pred cCChhhhcCCCcEEEEeccCC--------------hHHHHHHHHHHhhhCCCCcEEeecCCCCCHHH----Hhc----cc
Q psy3942 44 SSKVEDSVSQSDLVIEAIVEN--------------MDIKHKLFTSVDKIAPASAILASNTSSLSITE----IAS----VT 101 (160)
Q Consensus 44 ~~~~~~al~~adlViEav~E~--------------l~~K~~v~~~l~~~~~~~~iiasnTS~l~i~~----la~----~~ 101 (160)
++|+.++++++|+||=++.-. .+.=+++.+.+.+.+ |++++.. ++-|+.- ++. ..
T Consensus 67 t~d~~~al~gaDvVi~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~-p~~~viv--~SNPv~~~~~~~t~~~~~~~ 143 (326)
T 1smk_A 67 QQQLEAALTGMDLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCC-PRAIVNL--ISNPVNSTVPIAAEVFKKAG 143 (326)
T ss_dssp HHHHHHHHTTCSEEEECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHC-TTSEEEE--CCSSHHHHHHHHHHHHHHHT
T ss_pred CCCHHHHcCCCCEEEEcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEE--ECCchHHHHHHHHHHHHHcc
Confidence 557777899999999987411 145667778888887 5554444 2345554 322 12
Q ss_pred CC-CCcEEEe
Q psy3942 102 NR-KDKFVGL 110 (160)
Q Consensus 102 ~~-p~r~ig~ 110 (160)
.. |.|++|+
T Consensus 144 ~~p~~rviG~ 153 (326)
T 1smk_A 144 TYDPKRLLGV 153 (326)
T ss_dssp CCCTTSEEEC
T ss_pred CCCcccEEEE
Confidence 32 4688887
No 122
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=80.58 E-value=3 Score=35.57 Aligned_cols=107 Identities=11% Similarity=0.067 Sum_probs=58.9
Q ss_pred hcCceecCChhhhcCCCcEEEEeccC--------ChHHHHHHHHHHhhhC----CCCcEEeecCCCCCHH-HHh-----c
Q psy3942 38 LSRIKGSSKVEDSVSQSDLVIEAIVE--------NMDIKHKLFTSVDKIA----PASAILASNTSSLSIT-EIA-----S 99 (160)
Q Consensus 38 l~~i~~~~~~~~al~~adlViEav~E--------~l~~K~~v~~~l~~~~----~~~~iiasnTS~l~i~-~la-----~ 99 (160)
-++++++++++++++++|+++=|||= |+.-=.+..+.+.+.+ +.+.|+--+|...-.+ ++. .
T Consensus 82 ~g~l~~tt~~~~ai~~ad~~~I~VpTP~~~d~~~Dl~~v~~a~~~I~~~l~~~~~g~lVV~eSTVppGtte~~~~~~l~~ 161 (444)
T 3vtf_A 82 SGRLSFAESAEEAVAATDATFIAVGTPPAPDGSADLRYVEAAARAVGRGIRAKGRWHLVVVKSTVPPGTTEGLVARAVAE 161 (444)
T ss_dssp TTCEEECSSHHHHHHTSSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHHHHCSCCEEEECSCCCTTTTTTHHHHHHHT
T ss_pred cCCeeEEcCHHHHHhcCCceEEEecCCCCCCCCCCcHHHHHHHHHHHHHHhhcCCCeEEEEeCCCCCchHHHHHHHHHHH
Confidence 36899999998889999999999973 2333334455555544 2344554444333222 222 1
Q ss_pred ccCCCCcEEEeecCCCCCCCce---------EEEecCCCCCHHHHHHHHHHHHHcCCe
Q psy3942 100 VTNRKDKFVGLHFFNPVPMMKL---------LEVIRTNDTSDATYNAVTEWGKSIGKT 148 (160)
Q Consensus 100 ~~~~p~r~ig~Hf~~P~~~~~l---------VEvv~~~~T~~~~~~~~~~~~~~lgk~ 148 (160)
.....+-.++ |||-.+.+= --||-| .+++++.+.+..+.+.++..
T Consensus 162 ~~~~~~f~v~---~~PErl~eG~a~~d~~~~~riViG-~~~~~a~~~~~~ly~~~~~~ 215 (444)
T 3vtf_A 162 EAGGVKFSVA---SNPEFLREGSALEDFFKPDRIVIG-AGDERAASFLLDVYKAVDAP 215 (444)
T ss_dssp TTTTCCCEEE---ECCCCCCTTSHHHHHHSCSCEEEE-ESSHHHHHHHHHHTTTSCSC
T ss_pred hCCCCCceee---cCcccccCCccccccccCCcEEEc-CCCHHHHHHHHHHHhccCCC
Confidence 2111111111 455444331 113333 45677888888888877653
No 123
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=77.38 E-value=2.2 Score=34.23 Aligned_cols=68 Identities=15% Similarity=0.264 Sum_probs=41.6
Q ss_pred CceecCChhhhcCCCcEEEEeccC--------------ChHHHHHHHHHHhhhCCCCcEEe--ecCCCCCHHHHhc-ccC
Q psy3942 40 RIKGSSKVEDSVSQSDLVIEAIVE--------------NMDIKHKLFTSVDKIAPASAILA--SNTSSLSITEIAS-VTN 102 (160)
Q Consensus 40 ~i~~~~~~~~al~~adlViEav~E--------------~l~~K~~v~~~l~~~~~~~~iia--snTS~l~i~~la~-~~~ 102 (160)
+|+.++|+ +++++||+||=++.= |..+=+++.+++.+.+ |++++. ||--.+ ++.++. ...
T Consensus 57 ~i~~t~d~-~a~~~aDiVViaag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~-p~a~iivvsNPvd~-~t~~~~k~~g 133 (294)
T 1oju_A 57 KIVGGADY-SLLKGSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENA-PESKILVVTNPMDV-MTYIMWKESG 133 (294)
T ss_dssp EEEEESCG-GGGTTCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTS-TTCEEEECSSSHHH-HHHHHHHHSC
T ss_pred EEEEeCCH-HHhCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEeCCcchH-HHHHHHHhcC
Confidence 56667786 689999999988632 2234456677888886 566544 443332 222222 233
Q ss_pred C-CCcEEEe
Q psy3942 103 R-KDKFVGL 110 (160)
Q Consensus 103 ~-p~r~ig~ 110 (160)
. |.|++|+
T Consensus 134 ~p~~rviG~ 142 (294)
T 1oju_A 134 KPRNEVFGM 142 (294)
T ss_dssp CCTTSEEEC
T ss_pred CCHHHEeec
Confidence 3 5788887
No 124
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=76.48 E-value=1.2 Score=36.07 Aligned_cols=80 Identities=11% Similarity=0.125 Sum_probs=48.1
Q ss_pred ceecCChhhhcCCCcEEEEeccCChHHHHHHHHHHhhhCCCCcEEeecCCC--CCHHHHhcccCCCCcEE--EeecC--C
Q psy3942 41 IKGSSKVEDSVSQSDLVIEAIVENMDIKHKLFTSVDKIAPASAILASNTSS--LSITEIASVTNRKDKFV--GLHFF--N 114 (160)
Q Consensus 41 i~~~~~~~~al~~adlViEav~E~l~~K~~v~~~l~~~~~~~~iiasnTS~--l~i~~la~~~~~p~r~i--g~Hf~--~ 114 (160)
+.+.+++++.++++|+|+-++|-+-+.+.-+-++.-+.++++++|..-+++ +...+|...+.. .++- |+.+| .
T Consensus 190 ~~~~~~l~ell~~aDvVil~~p~~~~t~~~i~~~~l~~mk~gailIn~arg~~vd~~aL~~aL~~-g~i~gA~lDv~~~e 268 (320)
T 1gdh_A 190 ATFHDSLDSLLSVSQFFSLNAPSTPETRYFFNKATIKSLPQGAIVVNTARGDLVDNELVVAALEA-GRLAYAGFDVFAGE 268 (320)
T ss_dssp CEECSSHHHHHHHCSEEEECCCCCTTTTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHH-TSEEEEEESCCTTT
T ss_pred cEEcCCHHHHHhhCCEEEEeccCchHHHhhcCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHh-CCCcEEEEeCCCCC
Confidence 455557877789999999999966554432223344567888888755555 444566666542 2233 45555 3
Q ss_pred CCCCCce
Q psy3942 115 PVPMMKL 121 (160)
Q Consensus 115 P~~~~~l 121 (160)
|+...||
T Consensus 269 P~~~~~L 275 (320)
T 1gdh_A 269 PNINEGY 275 (320)
T ss_dssp TSCCTTG
T ss_pred CCCCChh
Confidence 4333444
No 125
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=75.62 E-value=5.9 Score=32.04 Aligned_cols=83 Identities=13% Similarity=0.142 Sum_probs=48.0
Q ss_pred CChhhhcCCCcEEEEeccCCh--------------HHHHHHHHHHhhhCCCCcEEeecCCCCCHHHHhc----ccCC-CC
Q psy3942 45 SKVEDSVSQSDLVIEAIVENM--------------DIKHKLFTSVDKIAPASAILASNTSSLSITEIAS----VTNR-KD 105 (160)
Q Consensus 45 ~~~~~al~~adlViEav~E~l--------------~~K~~v~~~l~~~~~~~~iiasnTS~l~i~~la~----~~~~-p~ 105 (160)
+++ ++++|||+||=++.=.. .+=+++...+.+.+ |++++.-- +-|+.-++. .... |.
T Consensus 69 ~~~-~a~~~aDvVii~ag~~~k~g~~R~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~--tNPv~~~t~~~~k~s~~p~~ 144 (326)
T 2zqz_A 69 AEY-SDAKDADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSG-FNGIFLVA--ANPVDILTYATWKLSGFPKN 144 (326)
T ss_dssp CCG-GGGGGCSEEEECCCCC-----CHHHHHHHHHHHHHHHHHHHHHHT-CCSEEEEC--SSSHHHHHHHHHHHHCCCGG
T ss_pred CCH-HHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEe--CCcHHHHHHHHHHHcCCCHH
Confidence 455 68999999998874322 33455667777787 56654432 334443333 2233 46
Q ss_pred cEEEeecCCCCCCCceEEEecCCCCCHHHHHHHHHHHHHcCCeE
Q psy3942 106 KFVGLHFFNPVPMMKLLEVIRTNDTSDATYNAVTEWGKSIGKTT 149 (160)
Q Consensus 106 r~ig~Hf~~P~~~~~lVEvv~~~~T~~~~~~~~~~~~~~lgk~p 149 (160)
|++|+ .|.-++...-..+++.+|..|
T Consensus 145 rviG~------------------gt~LD~~R~~~~la~~lgv~~ 170 (326)
T 2zqz_A 145 RVVGS------------------GTSLDTARFRQSIAEMVNVDA 170 (326)
T ss_dssp GEEEC------------------TTHHHHHHHHHHHHHHHTCCG
T ss_pred HEEEc------------------cccchHHHHHHHHHHHhCCCh
Confidence 88886 344444444445556677643
No 126
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=75.01 E-value=4.2 Score=33.12 Aligned_cols=91 Identities=20% Similarity=0.096 Sum_probs=53.3
Q ss_pred CceecCChhhhcCCCcEEEEecc--------------CChHHHHHHHHHHhhhCCCCc--EEeecCCCCCHHHHhcc-c-
Q psy3942 40 RIKGSSKVEDSVSQSDLVIEAIV--------------ENMDIKHKLFTSVDKIAPASA--ILASNTSSLSITEIASV-T- 101 (160)
Q Consensus 40 ~i~~~~~~~~al~~adlViEav~--------------E~l~~K~~v~~~l~~~~~~~~--iiasnTS~l~i~~la~~-~- 101 (160)
.+..+++..++++|||+||=+.. .|..+=+++...+.+.+++++ ++.||-..+ ++.++.. .
T Consensus 66 ~~~~~~~~~~~~~daDvVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~~~~~~~vivvsNPvd~-~t~~~~~~~~ 144 (333)
T 5mdh_A 66 DVIATDKEEIAFKDLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGNPANT-NCLTASKSAP 144 (333)
T ss_dssp EEEEESCHHHHTTTCSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHH-HHHHHHHTCT
T ss_pred CEEEcCCcHHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCchHH-HHHHHHHHcC
Confidence 35555565468999999997652 134556788888999988774 445664332 2333322 2
Q ss_pred CCCCcEEEeecCCCCCCCceEEEecCCCCCHHHHHHHHHHHHHcCCeE
Q psy3942 102 NRKDKFVGLHFFNPVPMMKLLEVIRTNDTSDATYNAVTEWGKSIGKTT 149 (160)
Q Consensus 102 ~~p~r~ig~Hf~~P~~~~~lVEvv~~~~T~~~~~~~~~~~~~~lgk~p 149 (160)
..|.|.+| ..|.-++...-..+++.+|..|
T Consensus 145 ~~p~~~ig------------------~~t~LDs~R~~~~la~~l~v~~ 174 (333)
T 5mdh_A 145 SIPKENFS------------------CLTRLDHNRAKAQIALKLGVTS 174 (333)
T ss_dssp TSCGGGEE------------------ECCHHHHHHHHHHHHHHHTCCG
T ss_pred CCCcCEEE------------------EEEhHHHHHHHHHHHHHhCcCH
Confidence 12333333 3566666554445557788654
No 127
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=74.41 E-value=1.3 Score=35.51 Aligned_cols=99 Identities=14% Similarity=0.038 Sum_probs=58.9
Q ss_pred ceecCChhhhcCCCcEEEEeccCChHHHHHHHHHHhhhCCCCcEEeecCC--CCCHHHHhcccC-CCCcEEEeecCCCCC
Q psy3942 41 IKGSSKVEDSVSQSDLVIEAIVENMDIKHKLFTSVDKIAPASAILASNTS--SLSITEIASVTN-RKDKFVGLHFFNPVP 117 (160)
Q Consensus 41 i~~~~~~~~al~~adlViEav~E~l~~K~~v~~~l~~~~~~~~iiasnTS--~l~i~~la~~~~-~p~r~ig~Hf~~P~~ 117 (160)
....+++++.++++|+|+=++|-+-+.+.-+-++.-+.++++++|...+. .+.-.+|...+. ..-+..|+=.|.+.+
T Consensus 161 ~~~~~~l~ell~~aDiV~l~~P~t~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~ga~lDV~~~EP 240 (290)
T 3gvx_A 161 DVISESPADLFRQSDFVLIAIPLTDKTRGMVNSRLLANARKNLTIVNVARADVVSKPDMIGFLKERSDVWYLSDVWWNEP 240 (290)
T ss_dssp SEECSSHHHHHHHCSEEEECCCCCTTTTTCBSHHHHTTCCTTCEEEECSCGGGBCHHHHHHHHHHCTTCEEEESCCTTTT
T ss_pred ccccCChHHHhhccCeEEEEeeccccchhhhhHHHHhhhhcCceEEEeehhcccCCcchhhhhhhccceEEeeccccCCc
Confidence 45667887788999999999997666655454556667788887753332 234456666553 333455665554333
Q ss_pred CCce-----EEEecCCC--CCHHHHHHHH
Q psy3942 118 MMKL-----LEVIRTND--TSDATYNAVT 139 (160)
Q Consensus 118 ~~~l-----VEvv~~~~--T~~~~~~~~~ 139 (160)
..|| |=+.++-. .++++.+++.
T Consensus 241 ~~pL~~~~nvilTPHiag~~t~e~~~~~~ 269 (290)
T 3gvx_A 241 EITETNLRNAILSPHVAGGMSGEIMDIAI 269 (290)
T ss_dssp SCCSCCCSSEEECCSCSSCBTTBCCHHHH
T ss_pred ccchhhhhhhhcCccccCCccchHHHHHH
Confidence 3443 44455522 3344444433
No 128
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=73.95 E-value=2.1 Score=34.69 Aligned_cols=69 Identities=12% Similarity=0.153 Sum_probs=40.2
Q ss_pred ceecCChhhhcCCCcEEEEeccC--------------ChHHHHHHHHHHhhhCCCCcEEe--ecCCCCCHHHHhcccCC-
Q psy3942 41 IKGSSKVEDSVSQSDLVIEAIVE--------------NMDIKHKLFTSVDKIAPASAILA--SNTSSLSITEIASVTNR- 103 (160)
Q Consensus 41 i~~~~~~~~al~~adlViEav~E--------------~l~~K~~v~~~l~~~~~~~~iia--snTS~l~i~~la~~~~~- 103 (160)
+..++++ +++++||+||=+..= |..+=+++...+.+.+ |++++. ||-...-..-+....+.
T Consensus 58 v~~~~~~-~a~~~aDvVii~ag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~-p~a~vivvtNPvd~~t~~~~k~~g~p 135 (314)
T 3nep_X 58 VTGTNDY-GPTEDSDVCIITAGLPRSPGMSRDDLLAKNTEIVGGVTEQFVEGS-PDSTIIVVANPLDVMTYVAYEASGFP 135 (314)
T ss_dssp EEEESSS-GGGTTCSEEEECCCC-------CHHHHHHHHHHHHHHHHHHHTTC-TTCEEEECCSSHHHHHHHHHHHHTCC
T ss_pred EEECCCH-HHhCCCCEEEECCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHHhC-CCcEEEecCCchhHHHHHHHHhcCCC
Confidence 4445677 689999999988632 2234456677888886 566443 55333222222222233
Q ss_pred CCcEEEee
Q psy3942 104 KDKFVGLH 111 (160)
Q Consensus 104 p~r~ig~H 111 (160)
|.|++|+.
T Consensus 136 ~~rviG~~ 143 (314)
T 3nep_X 136 TNRVMGMA 143 (314)
T ss_dssp GGGEEECC
T ss_pred hHHEEeec
Confidence 56888874
No 129
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=70.62 E-value=5 Score=32.59 Aligned_cols=85 Identities=14% Similarity=0.171 Sum_probs=48.6
Q ss_pred cCChhhhcCCCcEEEEeccC--------------ChHHHHHHHHHHhhhCCCCcEEe--ecCCCCCHHHHh-cccCC-CC
Q psy3942 44 SSKVEDSVSQSDLVIEAIVE--------------NMDIKHKLFTSVDKIAPASAILA--SNTSSLSITEIA-SVTNR-KD 105 (160)
Q Consensus 44 ~~~~~~al~~adlViEav~E--------------~l~~K~~v~~~l~~~~~~~~iia--snTS~l~i~~la-~~~~~-p~ 105 (160)
++++ +++++||+||=++.= |..+=+++...+.+.|+ ++++. ||-..+ ++.++ ..... |.
T Consensus 65 ~~~~-~a~~~aDvVvi~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p-~a~vlvvtNPvd~-~t~~~~k~~g~p~~ 141 (326)
T 3pqe_A 65 YGTY-EDCKDADIVCICAGANQKPGETRLELVEKNLKIFKGIVSEVMASGF-DGIFLVATNPVDI-LTYATWKFSGLPKE 141 (326)
T ss_dssp EECG-GGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTC-CSEEEECSSSHHH-HHHHHHHHHCCCGG
T ss_pred eCcH-HHhCCCCEEEEecccCCCCCccHHHHHHHHHHHHHHHHHHHHHhcC-CeEEEEcCChHHH-HHHHHHHhcCCCHH
Confidence 4566 589999999988731 12333677778888875 66544 544332 22332 22333 46
Q ss_pred cEEEeecCCCCCCCceEEEecCCCCCHHHHHHHHHHHHHcCCeE
Q psy3942 106 KFVGLHFFNPVPMMKLLEVIRTNDTSDATYNAVTEWGKSIGKTT 149 (160)
Q Consensus 106 r~ig~Hf~~P~~~~~lVEvv~~~~T~~~~~~~~~~~~~~lgk~p 149 (160)
|++|+ .|.-++...-..+++.+|..|
T Consensus 142 rviG~------------------gt~LD~~R~~~~la~~lgv~~ 167 (326)
T 3pqe_A 142 RVIGS------------------GTTLDSARFRFMLSEYFGAAP 167 (326)
T ss_dssp GEEEC------------------TTHHHHHHHHHHHHHHHTCCG
T ss_pred HEEee------------------ccccHHHHHHHHHHHHhCCCH
Confidence 88885 344444444444556677654
No 130
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=70.59 E-value=0.86 Score=39.50 Aligned_cols=103 Identities=11% Similarity=0.142 Sum_probs=61.4
Q ss_pred ChhhhcCCCcEEEEeccCChHHHHHHHHHHhhhCCCCcEEeecCCCCCHHH--HhcccCCCCcEE--EeecCC--CCCCC
Q psy3942 46 KVEDSVSQSDLVIEAIVENMDIKHKLFTSVDKIAPASAILASNTSSLSITE--IASVTNRKDKFV--GLHFFN--PVPMM 119 (160)
Q Consensus 46 ~~~~al~~adlViEav~E~l~~K~~v~~~l~~~~~~~~iiasnTS~l~i~~--la~~~~~p~r~i--g~Hf~~--P~~~~ 119 (160)
++++.+++||+|+=|+|-.-+.+.=+-+++-+.++++++|..-+.+-.+.+ |...+.. .++- ++.||. |+...
T Consensus 189 ~l~e~~~~aDvV~l~~P~~~~t~~~i~~~~~~~~k~g~ilin~arg~iv~~~aL~~al~~-g~i~ga~lDv~~~eP~~~~ 267 (529)
T 1ygy_A 189 SLDDLLARADFISVHLPKTPETAGLIDKEALAKTKPGVIIVNAARGGLVDEAALADAITG-GHVRAAGLDVFATEPCTDS 267 (529)
T ss_dssp CHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHT-SSEEEEEESSCSSSSCSCC
T ss_pred CHHHHHhcCCEEEECCCCchHHHHHhCHHHHhCCCCCCEEEECCCCchhhHHHHHHHHHc-CCccEEEEeeccCCCCCCc
Confidence 676778999999999997644443222334456788888875555444444 5455432 2332 444543 22233
Q ss_pred ce-----EEEecCCC-CCHHHHHH-----HHHHHHHcCCeE
Q psy3942 120 KL-----LEVIRTND-TSDATYNA-----VTEWGKSIGKTT 149 (160)
Q Consensus 120 ~l-----VEvv~~~~-T~~~~~~~-----~~~~~~~lgk~p 149 (160)
|| |=+.++.. ++++..++ +..+.+-++..+
T Consensus 268 ~L~~~~~vilTPh~~~~t~ea~~~~~~~~~~~l~~~l~~~~ 308 (529)
T 1ygy_A 268 PLFELAQVVVTPHLGASTAEAQDRAGTDVAESVRLALAGEF 308 (529)
T ss_dssp GGGGCTTEEECSSCSSCBHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred hHHhCCCEEEccccCCCCHHHHHHHHHHHHHHHHHHHcCCC
Confidence 44 44667777 78888765 555655566554
No 131
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=70.53 E-value=5.3 Score=32.18 Aligned_cols=62 Identities=13% Similarity=0.193 Sum_probs=36.0
Q ss_pred CChhhhcCCCcEEEEeccCCh--------------HHHHHHHHHHhhhCCCCcEEeecCCCCCHHHHhc----ccCC-CC
Q psy3942 45 SKVEDSVSQSDLVIEAIVENM--------------DIKHKLFTSVDKIAPASAILASNTSSLSITEIAS----VTNR-KD 105 (160)
Q Consensus 45 ~~~~~al~~adlViEav~E~l--------------~~K~~v~~~l~~~~~~~~iiasnTS~l~i~~la~----~~~~-p~ 105 (160)
+++ ++++|||+||=++.-.. .+=+++...+.+.+ |++++.-- +-|+.-++. .... |.
T Consensus 65 ~~~-~a~~~aDvVii~ag~~~~~g~~R~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~--tNPv~~~t~~~~k~s~~p~~ 140 (318)
T 1ez4_A 65 GEY-SDCKDADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSG-FDGIFLVA--ANPVDILTYATWKFSGFPKE 140 (318)
T ss_dssp CCG-GGGTTCSEEEECCCC----------CHHHHHHHHHHHHHHHHHTT-CCSEEEEC--SSSHHHHHHHHHHHHCCCGG
T ss_pred CCH-HHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEe--CCcHHHHHHHHHHHcCCCHH
Confidence 455 68999999998764321 34455666777776 56644431 334443332 2233 45
Q ss_pred cEEEe
Q psy3942 106 KFVGL 110 (160)
Q Consensus 106 r~ig~ 110 (160)
|++|+
T Consensus 141 rviG~ 145 (318)
T 1ez4_A 141 RVIGS 145 (318)
T ss_dssp GEEEC
T ss_pred HEEec
Confidence 88886
No 132
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=68.66 E-value=7.9 Score=31.03 Aligned_cols=62 Identities=15% Similarity=0.185 Sum_probs=36.7
Q ss_pred CChhhhcCCCcEEEEeccCCh--------------HHHHHHHHHHhhhCCCCcEEeecCCCCCHHHHhcc----cCC-CC
Q psy3942 45 SKVEDSVSQSDLVIEAIVENM--------------DIKHKLFTSVDKIAPASAILASNTSSLSITEIASV----TNR-KD 105 (160)
Q Consensus 45 ~~~~~al~~adlViEav~E~l--------------~~K~~v~~~l~~~~~~~~iiasnTS~l~i~~la~~----~~~-p~ 105 (160)
+++ +++++||+||=+++=.. .+=+++.+.+.+.+ |++++.- .+-|+.-++.. ... |.
T Consensus 67 ~~~-~a~~~aDvVii~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~viv--~tNPv~~~~~~~~k~s~~p~~ 142 (318)
T 1y6j_A 67 GDY-SDVKDCDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYY-NHGVILV--VSNPVDIITYMIQKWSGLPVG 142 (318)
T ss_dssp -CG-GGGTTCSEEEECCCC------CHHHHHHHHHHHHHHHHHHHHHHC-CSCEEEE--CSSSHHHHHHHHHHHHTCCTT
T ss_pred CCH-HHhCCCCEEEEcCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHhC-CCcEEEE--ecCcHHHHHHHHHHHcCCCHH
Confidence 456 58999999999886332 11267888888887 5565443 23455433322 222 45
Q ss_pred cEEEe
Q psy3942 106 KFVGL 110 (160)
Q Consensus 106 r~ig~ 110 (160)
|++|+
T Consensus 143 rviG~ 147 (318)
T 1y6j_A 143 KVIGS 147 (318)
T ss_dssp TEEEC
T ss_pred HEecc
Confidence 77775
No 133
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=67.63 E-value=5.9 Score=31.73 Aligned_cols=62 Identities=13% Similarity=0.151 Sum_probs=37.6
Q ss_pred CChhhhcCCCcEEEEeccCC--------------hHHHHHHHHHHhhhCCCCcEEeecCCCCCHHHHhc----ccCC-CC
Q psy3942 45 SKVEDSVSQSDLVIEAIVEN--------------MDIKHKLFTSVDKIAPASAILASNTSSLSITEIAS----VTNR-KD 105 (160)
Q Consensus 45 ~~~~~al~~adlViEav~E~--------------l~~K~~v~~~l~~~~~~~~iiasnTS~l~i~~la~----~~~~-p~ 105 (160)
+++ ++++|||+||=++.-. ..+=+++.+.+.+.+ |++++.-- +-|+.-++. .... |.
T Consensus 60 ~~~-~a~~~aD~Vii~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~--tNPv~~~t~~~~k~s~~p~~ 135 (310)
T 2xxj_A 60 GSY-GDLEGARAVVLAAGVAQRPGETRLQLLDRNAQVFAQVVPRVLEAA-PEAVLLVA--TNPVDVMTQVAYALSGLPPG 135 (310)
T ss_dssp CCG-GGGTTEEEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEEC--SSSHHHHHHHHHHHHTCCGG
T ss_pred CCH-HHhCCCCEEEECCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHHC-CCcEEEEe--cCchHHHHHHHHHHcCCCHH
Confidence 456 6899999999876422 344566777788886 55544432 334443332 2233 45
Q ss_pred cEEEe
Q psy3942 106 KFVGL 110 (160)
Q Consensus 106 r~ig~ 110 (160)
|++|+
T Consensus 136 rviG~ 140 (310)
T 2xxj_A 136 RVVGS 140 (310)
T ss_dssp GEEEC
T ss_pred HEEec
Confidence 88886
No 134
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=67.48 E-value=7.6 Score=30.85 Aligned_cols=62 Identities=16% Similarity=0.250 Sum_probs=38.2
Q ss_pred CChhhhcCCCcEEEEeccCC--------------hHHHHHHHHHHhhhCCCCcEEeecCCCCCHHHHhc----ccCC-CC
Q psy3942 45 SKVEDSVSQSDLVIEAIVEN--------------MDIKHKLFTSVDKIAPASAILASNTSSLSITEIAS----VTNR-KD 105 (160)
Q Consensus 45 ~~~~~al~~adlViEav~E~--------------l~~K~~v~~~l~~~~~~~~iiasnTS~l~i~~la~----~~~~-p~ 105 (160)
+++ ++++++|+||=++.-. .++=+++.+.+.+.++ ++++.. ++-|+.-++. .... |.
T Consensus 63 ~~~-~a~~~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~p-~~~viv--~SNPv~~~~~~~~~~~~~p~~ 138 (303)
T 1o6z_A 63 GGY-EDTAGSDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHND-DYISLT--TSNPVDLLNRHLYEAGDRSRE 138 (303)
T ss_dssp CCG-GGGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCS-CCEEEE--CCSSHHHHHHHHHHHSSSCGG
T ss_pred CCH-HHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC-CcEEEE--eCChHHHHHHHHHHHcCCCHH
Confidence 355 6899999999887421 1355677788888764 554443 2445543332 2233 46
Q ss_pred cEEEe
Q psy3942 106 KFVGL 110 (160)
Q Consensus 106 r~ig~ 110 (160)
|++|+
T Consensus 139 rviG~ 143 (303)
T 1o6z_A 139 QVIGF 143 (303)
T ss_dssp GEEEC
T ss_pred Heeec
Confidence 89887
No 135
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=64.56 E-value=9.5 Score=30.52 Aligned_cols=62 Identities=16% Similarity=0.195 Sum_probs=37.6
Q ss_pred CChhhhcCCCcEEEEeccCCh--------------HHHHHHHHHHhhhCCCCcEEeecCCCCCHHHHhccc----CC-CC
Q psy3942 45 SKVEDSVSQSDLVIEAIVENM--------------DIKHKLFTSVDKIAPASAILASNTSSLSITEIASVT----NR-KD 105 (160)
Q Consensus 45 ~~~~~al~~adlViEav~E~l--------------~~K~~v~~~l~~~~~~~~iiasnTS~l~i~~la~~~----~~-p~ 105 (160)
+++ +++++||+||=+++=.. .+=+++..++.+.+ |++++.- .+-|+.-++..+ .. |.
T Consensus 67 ~~~-~a~~~aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~viv--~tNPv~~~t~~~~k~~~~p~~ 142 (317)
T 3d0o_A 67 GEY-SDCHDADLVVICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMASK-FDGIFLV--ATNPVDILAYATWKFSGLPKE 142 (317)
T ss_dssp CCG-GGGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTT-CCSEEEE--CSSSHHHHHHHHHHHHCCCGG
T ss_pred CCH-HHhCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC-CCcEEEE--ecCcHHHHHHHHHHHhCCCHH
Confidence 445 68999999998874221 34456667777776 5665544 234555444322 33 45
Q ss_pred cEEEe
Q psy3942 106 KFVGL 110 (160)
Q Consensus 106 r~ig~ 110 (160)
|++|+
T Consensus 143 rviG~ 147 (317)
T 3d0o_A 143 RVIGS 147 (317)
T ss_dssp GEEEC
T ss_pred HEEec
Confidence 88886
No 136
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=61.81 E-value=2.7 Score=33.63 Aligned_cols=53 Identities=15% Similarity=0.273 Sum_probs=35.8
Q ss_pred ceecCChhhhcCCCcEEEEeccCChHHHHHHHHHHhhhCCCCcEEeec-CCCCCHHHHhc
Q psy3942 41 IKGSSKVEDSVSQSDLVIEAIVENMDIKHKLFTSVDKIAPASAILASN-TSSLSITEIAS 99 (160)
Q Consensus 41 i~~~~~~~~al~~adlViEav~E~l~~K~~v~~~l~~~~~~~~iiasn-TS~l~i~~la~ 99 (160)
+...++++++++++|+|+.|+|.. ..++.. ..++++++|.+- ++....+++..
T Consensus 184 ~~~~~~~~e~v~~aDiVi~atp~~----~~v~~~--~~l~~g~~vi~~g~~~p~~~el~~ 237 (312)
T 2i99_A 184 VRVCSSVQEAVAGADVIITVTLAT----EPILFG--EWVKPGAHINAVGASRPDWRELDD 237 (312)
T ss_dssp CEECSSHHHHHTTCSEEEECCCCS----SCCBCG--GGSCTTCEEEECCCCSTTCCSBCH
T ss_pred eEEeCCHHHHHhcCCEEEEEeCCC----CcccCH--HHcCCCcEEEeCCCCCCCceeccH
Confidence 677788877889999999999953 344433 456778777653 44443444443
No 137
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=60.18 E-value=6.5 Score=31.96 Aligned_cols=68 Identities=18% Similarity=0.222 Sum_probs=38.2
Q ss_pred Cceec-CChhhhcCCCcEEEEeccC--------------ChHHHHHHHHHHhhhCCCCcEEe--ecCCCCCHHHHhc-cc
Q psy3942 40 RIKGS-SKVEDSVSQSDLVIEAIVE--------------NMDIKHKLFTSVDKIAPASAILA--SNTSSLSITEIAS-VT 101 (160)
Q Consensus 40 ~i~~~-~~~~~al~~adlViEav~E--------------~l~~K~~v~~~l~~~~~~~~iia--snTS~l~i~~la~-~~ 101 (160)
.++.+ .++ +++++||+||=+..= |..+=+++.+.+.+.|+ ++++. ||-..+ ++.++. ..
T Consensus 63 ~~~i~~~~~-~a~~~aDiVvi~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p-~a~ilvvtNPvdi-~t~~~~k~~ 139 (326)
T 3vku_A 63 PKKIYSAEY-SDAKDADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGF-NGIFLVAANPVDI-LTYATWKLS 139 (326)
T ss_dssp CCEEEECCG-GGGTTCSEEEECCCCC----------------CHHHHHHHHHTTTC-CSEEEECSSSHHH-HHHHHHHHH
T ss_pred CcEEEECcH-HHhcCCCEEEECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhcCC-ceEEEEccCchHH-HHHHHHHhc
Confidence 34443 446 689999999987531 22334677788888875 66544 443332 222222 22
Q ss_pred CC-CCcEEEe
Q psy3942 102 NR-KDKFVGL 110 (160)
Q Consensus 102 ~~-p~r~ig~ 110 (160)
.. |.|++|+
T Consensus 140 g~p~~rviG~ 149 (326)
T 3vku_A 140 GFPKNRVVGS 149 (326)
T ss_dssp CCCGGGEEEC
T ss_pred CCCHHHeeee
Confidence 33 5688885
No 138
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=59.62 E-value=3.4 Score=33.21 Aligned_cols=70 Identities=13% Similarity=0.041 Sum_probs=41.8
Q ss_pred CChhhhcCCCcEEEEeccCChHHHHHHHHHHhhhCCCCcEEeecCCCCCH--HHHhcccCCCCcEEEeecCC
Q psy3942 45 SKVEDSVSQSDLVIEAIVENMDIKHKLFTSVDKIAPASAILASNTSSLSI--TEIASVTNRKDKFVGLHFFN 114 (160)
Q Consensus 45 ~~~~~al~~adlViEav~E~l~~K~~v~~~l~~~~~~~~iiasnTS~l~i--~~la~~~~~p~r~ig~Hf~~ 114 (160)
.++++.++++|+|+-++|-+-+.+.-+-++.-+.+++++++...+++-.+ .+|...+...-.-.|+-.|.
T Consensus 185 ~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lin~srg~~vd~~aL~~aL~g~i~ga~lDv~~ 256 (311)
T 2cuk_A 185 LSLEELLKEADVVSLHTPLTPETHRLLNRERLFAMKRGAILLNTARGALVDTEALVEALRGHLFGAGLDVTD 256 (311)
T ss_dssp CCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCHHHHHHHHTTTSSEEEESSCS
T ss_pred CCHHHHHhhCCEEEEeCCCChHHHhhcCHHHHhhCCCCcEEEECCCCCccCHHHHHHHHhCcCCEEEEeeCC
Confidence 46766789999999999887654432212233457888877644443322 34777766111224555554
No 139
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=59.39 E-value=8.1 Score=31.57 Aligned_cols=83 Identities=11% Similarity=0.087 Sum_probs=38.2
Q ss_pred ceecCChhhhcCCCcEEEEeccCChHHHHHHHHHHhhhCCCCcEEeecCCC--CCHHHHhcccCC-CCcEEEeecCC--C
Q psy3942 41 IKGSSKVEDSVSQSDLVIEAIVENMDIKHKLFTSVDKIAPASAILASNTSS--LSITEIASVTNR-KDKFVGLHFFN--P 115 (160)
Q Consensus 41 i~~~~~~~~al~~adlViEav~E~l~~K~~v~~~l~~~~~~~~iiasnTS~--l~i~~la~~~~~-p~r~ig~Hf~~--P 115 (160)
.....++++.+++||+|+=++|-+-+.+.-+-+++-+.++++++|..-+.+ +.-.+|...+.. .-+-.|+=-|. |
T Consensus 210 ~~~~~sl~ell~~aDvVil~vP~t~~t~~li~~~~l~~mk~gailIN~aRG~vvde~aL~~aL~~g~i~gA~LDVf~~EP 289 (340)
T 4dgs_A 210 WIAHQSPVDLARDSDVLAVCVAASAATQNIVDASLLQALGPEGIVVNVARGNVVDEDALIEALKSGTIAGAGLDVFVNEP 289 (340)
T ss_dssp CEECSSHHHHHHTCSEEEECC----------CHHHHHHTTTTCEEEECSCC--------------CCSSEEEESCCSSSS
T ss_pred ceecCCHHHHHhcCCEEEEeCCCCHHHHHHhhHHHHhcCCCCCEEEECCCCcccCHHHHHHHHHcCCceEEEeCCcCCCC
Confidence 344567878889999999999988887776656666678888887644333 223355555542 22334443333 4
Q ss_pred CCCCceEE
Q psy3942 116 VPMMKLLE 123 (160)
Q Consensus 116 ~~~~~lVE 123 (160)
....||.+
T Consensus 290 ~~~~~L~~ 297 (340)
T 4dgs_A 290 AIRSEFHT 297 (340)
T ss_dssp SCCSHHHH
T ss_pred CCccchhh
Confidence 33445533
No 140
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=59.16 E-value=8.2 Score=31.64 Aligned_cols=50 Identities=10% Similarity=0.080 Sum_probs=35.3
Q ss_pred CceecCChhhhcCCCcEEEEecc--------------CChHHHHHHHHHHhhhCCCCcE--EeecC
Q psy3942 40 RIKGSSKVEDSVSQSDLVIEAIV--------------ENMDIKHKLFTSVDKIAPASAI--LASNT 89 (160)
Q Consensus 40 ~i~~~~~~~~al~~adlViEav~--------------E~l~~K~~v~~~l~~~~~~~~i--iasnT 89 (160)
.+..+++..++++|||+||=+.. .|..+=+++-..|.+.++|+++ +.||.
T Consensus 87 ~~~~~~~~~~a~~~advVvi~aG~prkpGmtR~DLl~~Na~I~~~~~~~i~~~a~~~~~vlvvsNP 152 (345)
T 4h7p_A 87 KVVVTADPRVAFDGVAIAIMCGAFPRKAGMERKDLLEMNARIFKEQGEAIAAVAASDCRVVVVGNP 152 (345)
T ss_dssp EEEEESCHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSS
T ss_pred cEEEcCChHHHhCCCCEEEECCCCCCCCCCCHHHHHHHhHHHHHHHHHHHHhhccCceEEEEeCCC
Confidence 45556676678999999996542 2344556677778888999985 45774
No 141
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=57.68 E-value=13 Score=29.77 Aligned_cols=69 Identities=20% Similarity=0.365 Sum_probs=41.1
Q ss_pred CceecCChhhhcCCCcEEEEecc-----C---------ChHHHHHHHHHHhhhCCCCcEE-eecCCCCCHHHHh-cccCC
Q psy3942 40 RIKGSSKVEDSVSQSDLVIEAIV-----E---------NMDIKHKLFTSVDKIAPASAIL-ASNTSSLSITEIA-SVTNR 103 (160)
Q Consensus 40 ~i~~~~~~~~al~~adlViEav~-----E---------~l~~K~~v~~~l~~~~~~~~ii-asnTS~l~i~~la-~~~~~ 103 (160)
++..++|+ ++++|||+||=+.. . |..+=+++..++.+.++...++ .||--.. ++.++ ..++.
T Consensus 57 ~i~~~~d~-~~~~~aDvVvitAG~prkpGmtR~dLl~~Na~I~~~i~~~i~~~~p~aivlvvsNPvd~-~t~i~~k~sg~ 134 (294)
T 2x0j_A 57 KIVGGADY-SLLKGSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTNPMDV-MTYIMWKESGK 134 (294)
T ss_dssp EEEEESCG-GGGTTCSEEEECCCCCCCSSSCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSSSHHH-HHHHHHHHSSC
T ss_pred eEecCCCH-HHhCCCCEEEEecCCCCCCCCchHHHHHHHHHHHHHHHHHHHhcCCceEEEEecCcchh-hHHhhHHHcCC
Confidence 45667889 58999999987653 1 3344567788888887544433 3553222 22233 23333
Q ss_pred -CCcEEEe
Q psy3942 104 -KDKFVGL 110 (160)
Q Consensus 104 -p~r~ig~ 110 (160)
|.|++|+
T Consensus 135 p~~rvig~ 142 (294)
T 2x0j_A 135 PRNEVFGM 142 (294)
T ss_dssp CTTSEEEC
T ss_pred ChhhEEEe
Confidence 4577775
No 142
>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*
Probab=53.62 E-value=4.6 Score=32.79 Aligned_cols=45 Identities=9% Similarity=0.159 Sum_probs=36.2
Q ss_pred HHHHHHHHHhhhCCCCcEEeecCCCCCHHHHhcccC-----CCCcEEEeec
Q psy3942 67 IKHKLFTSVDKIAPASAILASNTSSLSITEIASVTN-----RKDKFVGLHF 112 (160)
Q Consensus 67 ~K~~v~~~l~~~~~~~~iiasnTS~l~i~~la~~~~-----~p~r~ig~Hf 112 (160)
--+++++.+.+. .-++.|+|.|...-+..+|+..+ -|++|+|+.+
T Consensus 147 ~~~~l~~~l~~~-G~~v~ivSas~~~~v~~~a~~~~~~ygIp~e~ViG~~~ 196 (327)
T 4as2_A 147 GQRELYNKLMEN-GIEVYVISAAHEELVRMVAADPRYGYNAKPENVIGVTT 196 (327)
T ss_dssp HHHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHTCGGGSCCCCGGGEEEECE
T ss_pred HHHHHHHHHHHC-CCEEEEEeCCcHHHHHHHHhhcccccCCCHHHeEeeee
Confidence 346788888775 78899999999999999998652 3799999875
No 143
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=51.06 E-value=4 Score=32.66 Aligned_cols=73 Identities=18% Similarity=0.103 Sum_probs=43.2
Q ss_pred ceecCChhhhcCCCcEEEEeccCChHHHHHHHHHHhhhCCCCcEEeecCCCC--CHHHHhcccC-CCCcEEEeecCC
Q psy3942 41 IKGSSKVEDSVSQSDLVIEAIVENMDIKHKLFTSVDKIAPASAILASNTSSL--SITEIASVTN-RKDKFVGLHFFN 114 (160)
Q Consensus 41 i~~~~~~~~al~~adlViEav~E~l~~K~~v~~~l~~~~~~~~iiasnTS~l--~i~~la~~~~-~p~r~ig~Hf~~ 114 (160)
+.+. ++++.++++|+|+-++|-+.+.+.-+-++.-+.++++++|...+++- .-.+|...+. ..-.-.|+-+|.
T Consensus 185 ~~~~-~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lin~arg~~vd~~aL~~aL~~g~i~ga~lDv~~ 260 (307)
T 1wwk_A 185 GKFV-DLETLLKESDVVTIHVPLVESTYHLINEERLKLMKKTAILINTSRGPVVDTNALVKALKEGWIAGAGLDVFE 260 (307)
T ss_dssp CEEC-CHHHHHHHCSEEEECCCCSTTTTTCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSEEEESCCS
T ss_pred cccc-CHHHHHhhCCEEEEecCCChHHhhhcCHHHHhcCCCCeEEEECCCCcccCHHHHHHHHHhCCCcEEEEecCC
Confidence 3443 67677889999999999776654422233334568888777555543 2335565553 222334555554
No 144
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=50.31 E-value=16 Score=29.05 Aligned_cols=60 Identities=20% Similarity=0.184 Sum_probs=36.1
Q ss_pred hhhhcCCCcEEEEecc--C------------ChHHHHHHHHHHhhhCCCCcEEeecCCCCCHH---HHhc-ccC-CCCcE
Q psy3942 47 VEDSVSQSDLVIEAIV--E------------NMDIKHKLFTSVDKIAPASAILASNTSSLSIT---EIAS-VTN-RKDKF 107 (160)
Q Consensus 47 ~~~al~~adlViEav~--E------------~l~~K~~v~~~l~~~~~~~~iiasnTS~l~i~---~la~-~~~-~p~r~ 107 (160)
+.++++|+|+||-++. . |..+=+++.+.+.+.+ ++++...| -|+. .++. ... .|.|+
T Consensus 68 l~~al~gaD~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~--~~~vlv~S--NPv~~~t~~~~k~~~~p~~rv 143 (313)
T 1hye_A 68 NLRIIDESDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC--DTKIFVIT--NPVDVMTYKALVDSKFERNQV 143 (313)
T ss_dssp CGGGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC--CCEEEECS--SSHHHHHHHHHHHHCCCTTSE
T ss_pred hHHHhCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC--CeEEEEec--CcHHHHHHHHHHhhCcChhcE
Confidence 4478999999998863 1 2234558888888888 55443322 2333 3322 222 35688
Q ss_pred EEe
Q psy3942 108 VGL 110 (160)
Q Consensus 108 ig~ 110 (160)
+|+
T Consensus 144 iG~ 146 (313)
T 1hye_A 144 FGL 146 (313)
T ss_dssp EEC
T ss_pred EEe
Confidence 886
No 145
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=49.82 E-value=21 Score=28.48 Aligned_cols=51 Identities=16% Similarity=0.120 Sum_probs=34.0
Q ss_pred CceecCChhhhcCCCcEEEEeccCChHHHHHHHHHHhhhCCCCcEEeecCCCCCHH
Q psy3942 40 RIKGSSKVEDSVSQSDLVIEAIVENMDIKHKLFTSVDKIAPASAILASNTSSLSIT 95 (160)
Q Consensus 40 ~i~~~~~~~~al~~adlViEav~E~l~~K~~v~~~l~~~~~~~~iiasnTS~l~i~ 95 (160)
.+.+++|+++.+.++|+||++.+ -...+..+...+..+..+.+.|.+++-.
T Consensus 75 gv~v~~dl~~ll~~aDVvIDFT~-----p~a~~~~~~~~l~~Gv~vViGTTG~~~e 125 (288)
T 3ijp_A 75 GVRITDDPESAFSNTEGILDFSQ-----PQASVLYANYAAQKSLIHIIGTTGFSKT 125 (288)
T ss_dssp SCBCBSCHHHHTTSCSEEEECSC-----HHHHHHHHHHHHHHTCEEEECCCCCCHH
T ss_pred CceeeCCHHHHhcCCCEEEEcCC-----HHHHHHHHHHHHHcCCCEEEECCCCCHH
Confidence 35667899777889999999874 2334555555555566666666667654
No 146
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=49.28 E-value=20 Score=28.75 Aligned_cols=64 Identities=23% Similarity=0.340 Sum_probs=37.7
Q ss_pred CChhhhcCCCcEEEEeccC--------------ChHHHHHHHHHHhhhCCCCcEEe--ecCCCCCHHHHh----cccC--
Q psy3942 45 SKVEDSVSQSDLVIEAIVE--------------NMDIKHKLFTSVDKIAPASAILA--SNTSSLSITEIA----SVTN-- 102 (160)
Q Consensus 45 ~~~~~al~~adlViEav~E--------------~l~~K~~v~~~l~~~~~~~~iia--snTS~l~i~~la----~~~~-- 102 (160)
+++ ++++|||+||=+..- |..+=+++...+.+.++ ++++. ||-... ++.++ ...+
T Consensus 62 ~~~-~~~~~aDivii~ag~~rkpG~~R~dll~~N~~I~~~i~~~i~~~~p-~a~vlvvtNPvd~-~t~~a~~~~k~sg~~ 138 (312)
T 3hhp_A 62 DAT-PALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCP-KACIGIITNPVNT-TVAIAAEVLKKAGVY 138 (312)
T ss_dssp CCH-HHHTTCSEEEECCSCSCCTTCCHHHHHHHHHHHHHHHHHHHHHHCT-TSEEEECSSCHHH-HHHHHHHHHHHTTCC
T ss_pred CcH-HHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC-CcEEEEecCcchh-HHHHHHHHHHHcCCC
Confidence 456 689999999987621 23444677778888874 55443 443221 23331 1222
Q ss_pred CCCcEEEee
Q psy3942 103 RKDKFVGLH 111 (160)
Q Consensus 103 ~p~r~ig~H 111 (160)
.|.|++|+.
T Consensus 139 p~~rv~G~~ 147 (312)
T 3hhp_A 139 DKNKLFGVT 147 (312)
T ss_dssp CTTSEEECC
T ss_pred CcceEEEEe
Confidence 367888874
No 147
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=48.99 E-value=13 Score=29.28 Aligned_cols=51 Identities=14% Similarity=0.199 Sum_probs=31.0
Q ss_pred CceecCChhhhcCCCcEEEEeccCChHHHHHHHHHHhhhCCCCcEEeecCCCCCHH
Q psy3942 40 RIKGSSKVEDSVSQSDLVIEAIVENMDIKHKLFTSVDKIAPASAILASNTSSLSIT 95 (160)
Q Consensus 40 ~i~~~~~~~~al~~adlViEav~E~l~~K~~v~~~l~~~~~~~~iiasnTS~l~i~ 95 (160)
.+..++|+++.+.++|+||++.+- ...+..+...+..+..+.+.|.+++-.
T Consensus 60 gv~v~~dl~~ll~~~DVVIDfT~p-----~a~~~~~~~al~~G~~vVigTTG~s~~ 110 (272)
T 4f3y_A 60 GVALTDDIERVCAEADYLIDFTLP-----EGTLVHLDAALRHDVKLVIGTTGFSEP 110 (272)
T ss_dssp SCBCBCCHHHHHHHCSEEEECSCH-----HHHHHHHHHHHHHTCEEEECCCCCCHH
T ss_pred CceecCCHHHHhcCCCEEEEcCCH-----HHHHHHHHHHHHcCCCEEEECCCCCHH
Confidence 455678887778899999998742 223334444444444455555566655
No 148
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=47.50 E-value=46 Score=26.16 Aligned_cols=85 Identities=12% Similarity=0.089 Sum_probs=55.9
Q ss_pred eccCChHHHHHHHHHHhhhCCCCcEEeecCCCCCHHHHhcccCC-----CCcEEEeecCCCCCCCceEEEecCCCCCHHH
Q psy3942 60 AIVENMDIKHKLFTSVDKIAPASAILASNTSSLSITEIASVTNR-----KDKFVGLHFFNPVPMMKLLEVIRTNDTSDAT 134 (160)
Q Consensus 60 av~E~l~~K~~v~~~l~~~~~~~~iiasnTS~l~i~~la~~~~~-----p~r~ig~Hf~~P~~~~~lVEvv~~~~T~~~~ 134 (160)
+..=+.+.|+++++..-+.+.....+...+++.+..+-....++ .+-++-+ ||+..+ .+.++.
T Consensus 51 ~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~----~P~y~~--------~~~~~l 118 (293)
T 1f6k_A 51 NFMLSTEEKKEIFRIAKDEAKDQIALIAQVGSVNLKEAVELGKYATELGYDCLSAV----TPFYYK--------FSFPEI 118 (293)
T ss_dssp GGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEEE----CCCSSC--------CCHHHH
T ss_pred hhhCCHHHHHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEEC----CCCCCC--------CCHHHH
Confidence 33445678999999988888877877777777776654433221 2223332 233322 256788
Q ss_pred HHHHHHHHHHcCCeEEEecCcCc
Q psy3942 135 YNAVTEWGKSIGKTTIVCKDTPG 157 (160)
Q Consensus 135 ~~~~~~~~~~lgk~pv~v~d~pG 157 (160)
++.-.++++..+. ||++.+.|+
T Consensus 119 ~~~f~~va~a~~l-PiilYn~P~ 140 (293)
T 1f6k_A 119 KHYYDTIIAETGS-NMIVYSIPF 140 (293)
T ss_dssp HHHHHHHHHHHCC-CEEEEECHH
T ss_pred HHHHHHHHHhCCC-CEEEEECcc
Confidence 8888888888875 999987775
No 149
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=47.26 E-value=9.8 Score=31.15 Aligned_cols=89 Identities=10% Similarity=0.057 Sum_probs=54.1
Q ss_pred CceecCChhhhcCCCcEEEEeccCChHHHHHHHHHHhhhCCCCcEEeecC--CCCCHHHHhcccCCCCcEEEe----ecC
Q psy3942 40 RIKGSSKVEDSVSQSDLVIEAIVENMDIKHKLFTSVDKIAPASAILASNT--SSLSITEIASVTNRKDKFVGL----HFF 113 (160)
Q Consensus 40 ~i~~~~~~~~al~~adlViEav~E~l~~K~~v~~~l~~~~~~~~iiasnT--S~l~i~~la~~~~~p~r~ig~----Hf~ 113 (160)
...+..++++.++++|+|+=++|-+-+.+.-+-++.=+.++++++|...+ +-+.-..|...+.. .++-|. .--
T Consensus 214 g~~~~~~l~ell~~sDvV~l~~Plt~~T~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~-g~i~gA~LDVf~~ 292 (345)
T 4g2n_A 214 GAIYHDTLDSLLGASDIFLIAAPGRPELKGFLDHDRIAKIPEGAVVINISRGDLINDDALIEALRS-KHLFAAGLDVFAN 292 (345)
T ss_dssp TCEECSSHHHHHHTCSEEEECSCCCGGGTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHH-TSEEEEEESCCTT
T ss_pred CCeEeCCHHHHHhhCCEEEEecCCCHHHHHHhCHHHHhhCCCCcEEEECCCCchhCHHHHHHHHHh-CCceEEEecCCCC
Confidence 45666788888899999999999877766545455555678888775332 33444566666532 344443 222
Q ss_pred CCCCCCceEE---EecCCC
Q psy3942 114 NPVPMMKLLE---VIRTND 129 (160)
Q Consensus 114 ~P~~~~~lVE---vv~~~~ 129 (160)
.|+...||.+ |+-+|.
T Consensus 293 EP~~~~pL~~~~nvilTPH 311 (345)
T 4g2n_A 293 EPAIDPRYRSLDNIFLTPH 311 (345)
T ss_dssp TTSCCTTGGGCTTEEECCS
T ss_pred CCCCCchHHhCCCEEEcCc
Confidence 3544555543 444443
No 150
>2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A
Probab=45.82 E-value=94 Score=23.76 Aligned_cols=85 Identities=7% Similarity=0.105 Sum_probs=47.0
Q ss_pred cEEEEeccCCh---------HHHHHHHHHHhhhCCCCcEEeec--CCCCCH------HHHhcccCCC--CcEEEeecCCC
Q psy3942 55 DLVIEAIVENM---------DIKHKLFTSVDKIAPASAILASN--TSSLSI------TEIASVTNRK--DKFVGLHFFNP 115 (160)
Q Consensus 55 dlViEav~E~l---------~~K~~v~~~l~~~~~~~~iiasn--TS~l~i------~~la~~~~~p--~r~ig~Hf~~P 115 (160)
-+++|-..|.. +.=++++..+.+.-+...|+... -+..+- ..+. ...| .-++.+|+|.|
T Consensus 116 ~v~~el~NEP~~~~~~~~~~~~~~~~~~~IR~~d~~~~i~v~~~~~~~~~~~~~~~~~~~~--~~d~~~n~v~s~H~Y~~ 193 (294)
T 2whl_A 116 TVIINIANEWYGSWDGSAWADGYIDVIPKLRDAGLTHTLMVDAAGWGQYPQSIHDYGQDVF--NADPLKNTMFSIHMYEY 193 (294)
T ss_dssp TEEEECCTTCCCSSCHHHHHHHHHHHHHHHHHTTCCSCEEEECBTTTTBTHHHHHHHHHHH--HTCTTCCEEEEEEESTT
T ss_pred eEEEEecCCCCCCCChHHHHHHHHHHHHHHHhcCCCcEEEEcCCCCCCCchhhhhhhhccc--cCCCcCCEEEEEEeccC
Confidence 36677777743 23346777777765555555432 233221 0222 1222 34799999975
Q ss_pred CCCCceEEEecCCCCCHHHHHHHHHHHHHcCCeEEEecC
Q psy3942 116 VPMMKLLEVIRTNDTSDATYNAVTEWGKSIGKTTIVCKD 154 (160)
Q Consensus 116 ~~~~~lVEvv~~~~T~~~~~~~~~~~~~~lgk~pv~v~d 154 (160)
. .|+++.+......+...|+ |+++.|
T Consensus 194 ~------------~~~~~~~~~~~~~~~~~~~-Pv~igE 219 (294)
T 2whl_A 194 A------------GGDANTVRSNIDRVIDQDL-ALVIGE 219 (294)
T ss_dssp T------------TSSHHHHHHHHHHHHTTTC-CEEEEE
T ss_pred C------------CCcHHHHHHHHHHHHHCCC-CEEEEc
Confidence 3 3555666655566666665 777654
No 151
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=44.83 E-value=11 Score=29.81 Aligned_cols=85 Identities=12% Similarity=0.105 Sum_probs=52.0
Q ss_pred eccCChHHHHHHHHHHhhhCCCCcEEeecCCCCCHHHHhcccCC-----CCcEEEeecCCCCCCCceEEEecCCCCCHHH
Q psy3942 60 AIVENMDIKHKLFTSVDKIAPASAILASNTSSLSITEIASVTNR-----KDKFVGLHFFNPVPMMKLLEVIRTNDTSDAT 134 (160)
Q Consensus 60 av~E~l~~K~~v~~~l~~~~~~~~iiasnTS~l~i~~la~~~~~-----p~r~ig~Hf~~P~~~~~lVEvv~~~~T~~~~ 134 (160)
+..=+.+.|+++++..-+.+.....+...+++.+..+-....++ .+-++.+ ||+..+ .|.++.
T Consensus 48 ~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~----~P~y~~--------~s~~~l 115 (292)
T 2ojp_A 48 SATLNHDEHADVVMMTLDLADGRIPVIAGTGANATAEAISLTQRFNDSGIVGCLTV----TPYYNR--------PSQEGL 115 (292)
T ss_dssp GGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHTTTSSCSEEEEE----CCCSSC--------CCHHHH
T ss_pred hhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHhcCCCEEEEC----CCCCCC--------CCHHHH
Confidence 33445677899999888777766666666666666544332222 2223222 333332 266777
Q ss_pred HHHHHHHHHHcCCeEEEecCcCc
Q psy3942 135 YNAVTEWGKSIGKTTIVCKDTPG 157 (160)
Q Consensus 135 ~~~~~~~~~~lgk~pv~v~d~pG 157 (160)
++.-.++++..+ .||++.+.|+
T Consensus 116 ~~~f~~ia~a~~-lPiilYn~P~ 137 (292)
T 2ojp_A 116 YQHFKAIAEHTD-LPQILYNVPS 137 (292)
T ss_dssp HHHHHHHHTTCS-SCEEEECCHH
T ss_pred HHHHHHHHHhcC-CCEEEEeCcc
Confidence 777777777775 5888887776
No 152
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=38.65 E-value=43 Score=26.50 Aligned_cols=94 Identities=6% Similarity=0.081 Sum_probs=54.4
Q ss_pred cCChhhhcCCCcEEEEeccCChHHHHHHHHHHhhhCCCCcEEeecCCCCCH--HHHhcccC-CCCcEEEeecC---CCCC
Q psy3942 44 SSKVEDSVSQSDLVIEAIVENMDIKHKLFTSVDKIAPASAILASNTSSLSI--TEIASVTN-RKDKFVGLHFF---NPVP 117 (160)
Q Consensus 44 ~~~~~~al~~adlViEav~E~l~~K~~v~~~l~~~~~~~~iiasnTS~l~i--~~la~~~~-~p~r~ig~Hf~---~P~~ 117 (160)
..++++.++++|+|+-++|-+-+.+.-+-+++-+.++++++|.-.+++-.+ .+|...+. ..-.-.|+.-| .|.+
T Consensus 165 ~~~l~ell~~aDvV~l~~P~~~~t~~~i~~~~l~~mk~gailin~srg~~vd~~aL~~aL~~g~i~gA~lDv~~~~ep~~ 244 (303)
T 1qp8_A 165 TNSLEEALREARAAVCALPLNKHTRGLVKYQHLALMAEDAVFVNVGRAEVLDRDGVLRILKERPQFIFASDVWWGRNDFA 244 (303)
T ss_dssp BSCSHHHHTTCSEEEECCCCSTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCHHHHHHHHHHCTTCEEEESCCTTTTCCG
T ss_pred CCCHHHHHhhCCEEEEeCcCchHHHHHhCHHHHhhCCCCCEEEECCCCcccCHHHHHHHHHhCCceEEEeccCCCCCCCC
Confidence 456767789999999999987665543333445567888877644443222 24665553 22233666656 3432
Q ss_pred -C-----CceEEEecCCCC---CHHHHHH
Q psy3942 118 -M-----MKLLEVIRTNDT---SDATYNA 137 (160)
Q Consensus 118 -~-----~~lVEvv~~~~T---~~~~~~~ 137 (160)
. .|-|=+.+|... +.++..+
T Consensus 245 ~~~~L~~~~nviltPH~~~~~~t~e~~~~ 273 (303)
T 1qp8_A 245 KDAEFFSLPNVVATPWVAGGYGNERVWRQ 273 (303)
T ss_dssp GGHHHHTSTTEEECCSCSSSSSCHHHHHH
T ss_pred CCChhhcCCCEEECCCcCCCCCCHHHHHH
Confidence 2 233446666543 4555443
No 153
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=38.40 E-value=79 Score=26.47 Aligned_cols=62 Identities=16% Similarity=0.233 Sum_probs=39.7
Q ss_pred ceecCChhhhcCCCcEEEEeccCChHHHHHHHHHHhhhCCCCcEEeecC--CCCCHHHHhcccC
Q psy3942 41 IKGSSKVEDSVSQSDLVIEAIVENMDIKHKLFTSVDKIAPASAILASNT--SSLSITEIASVTN 102 (160)
Q Consensus 41 i~~~~~~~~al~~adlViEav~E~l~~K~~v~~~l~~~~~~~~iiasnT--S~l~i~~la~~~~ 102 (160)
.....++++.+++||+|+=++|-.-+.+.-+-++.=+.++++++|...+ +-+...+|...+.
T Consensus 196 ~~~~~sl~ell~~aDvV~lhvPlt~~T~~li~~~~l~~mk~gailIN~aRG~vvd~~aL~~aL~ 259 (416)
T 3k5p_A 196 VKPAASLDELLKTSDVVSLHVPSSKSTSKLITEAKLRKMKKGAFLINNARGSDVDLEALAKVLQ 259 (416)
T ss_dssp BEECSSHHHHHHHCSEEEECCCC-----CCBCHHHHHHSCTTEEEEECSCTTSBCHHHHHHHHH
T ss_pred cEecCCHHHHHhhCCEEEEeCCCCHHHhhhcCHHHHhhCCCCcEEEECCCChhhhHHHHHHHHH
Confidence 3455688788899999999999988776555455555678888776444 3344556777664
No 154
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=38.31 E-value=39 Score=26.45 Aligned_cols=43 Identities=9% Similarity=-0.150 Sum_probs=27.5
Q ss_pred CceecCChhhhcCCCcEEEEeccCChHHHHHHHHHHhhhCCCCcEEee
Q psy3942 40 RIKGSSKVEDSVSQSDLVIEAIVENMDIKHKLFTSVDKIAPASAILAS 87 (160)
Q Consensus 40 ~i~~~~~~~~al~~adlViEav~E~l~~K~~v~~~l~~~~~~~~iias 87 (160)
.+..++|+++.++++|+|+||..-. .+-..+.+.+..++-+.+
T Consensus 47 gv~a~~d~d~lla~pD~VVe~A~~~-----av~e~~~~iL~aG~dvv~ 89 (253)
T 1j5p_A 47 PGVVRLDEFQVPSDVSTVVECASPE-----AVKEYSLQILKNPVNYII 89 (253)
T ss_dssp SSSEECSSCCCCTTCCEEEECSCHH-----HHHHHHHHHTTSSSEEEE
T ss_pred CceeeCCHHHHhhCCCEEEECCCHH-----HHHHHHHHHHHCCCCEEE
Confidence 4456788866668999999998322 333346666666553333
No 155
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=38.13 E-value=76 Score=21.12 Aligned_cols=46 Identities=9% Similarity=0.114 Sum_probs=35.5
Q ss_pred cCCCcEEEEeccCChHHHHHHHHHHhhhCCCCcEEeecCCCCCHHHHh
Q psy3942 51 VSQSDLVIEAIVENMDIKHKLFTSVDKIAPASAILASNTSSLSITEIA 98 (160)
Q Consensus 51 l~~adlViEav~E~l~~K~~v~~~l~~~~~~~~iiasnTS~l~i~~la 98 (160)
+.++|+||-+++ +.+....+...+.... ...|++..++......+.
T Consensus 68 ~~~~d~vi~~~~-~~~~n~~~~~~a~~~~-~~~iia~~~~~~~~~~l~ 113 (141)
T 3llv_A 68 LEGVSAVLITGS-DDEFNLKILKALRSVS-DVYAIVRVSSPKKKEEFE 113 (141)
T ss_dssp CTTCSEEEECCS-CHHHHHHHHHHHHHHC-CCCEEEEESCGGGHHHHH
T ss_pred cccCCEEEEecC-CHHHHHHHHHHHHHhC-CceEEEEEcChhHHHHHH
Confidence 568999999998 7777777888887776 677888777776655553
No 156
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=37.58 E-value=94 Score=24.50 Aligned_cols=86 Identities=14% Similarity=0.129 Sum_probs=56.5
Q ss_pred EeccCChHHHHHHHHHHhhhCCCCcEEeecCCCCCHHHHhcccC-----CCCcEEEeecCCCCCCCceEEEecCCCCCHH
Q psy3942 59 EAIVENMDIKHKLFTSVDKIAPASAILASNTSSLSITEIASVTN-----RKDKFVGLHFFNPVPMMKLLEVIRTNDTSDA 133 (160)
Q Consensus 59 Eav~E~l~~K~~v~~~l~~~~~~~~iiasnTS~l~i~~la~~~~-----~p~r~ig~Hf~~P~~~~~lVEvv~~~~T~~~ 133 (160)
|+..=+.+.|+++++..-+.+.....+...+++.+..+-....+ ..+-++-+ ||+..+ .+.++
T Consensus 62 E~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~st~~ai~la~~A~~~Gadavlv~----~P~y~~--------~~~~~ 129 (304)
T 3cpr_A 62 ESPTTTAAEKLELLKAVREEVGDRAKLIAGVGTNNTRTSVELAEAAASAGADGLLVV----TPYYSK--------PSQEG 129 (304)
T ss_dssp TTTTSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEE----CCCSSC--------CCHHH
T ss_pred ChhhCCHHHHHHHHHHHHHHhCCCCcEEecCCCCCHHHHHHHHHHHHhcCCCEEEEC----CCCCCC--------CCHHH
Confidence 44455677899999998888877777777777777664433222 12333332 233322 35778
Q ss_pred HHHHHHHHHHHcCCeEEEecCcCc
Q psy3942 134 TYNAVTEWGKSIGKTTIVCKDTPG 157 (160)
Q Consensus 134 ~~~~~~~~~~~lgk~pv~v~d~pG 157 (160)
.++.-.++++..+ .||++.+.|+
T Consensus 130 l~~~f~~ia~a~~-lPiilYn~P~ 152 (304)
T 3cpr_A 130 LLAHFGAIAAATE-VPICLYDIPG 152 (304)
T ss_dssp HHHHHHHHHHHCC-SCEEEEECHH
T ss_pred HHHHHHHHHHhcC-CCEEEEeCcc
Confidence 8888888888886 5999988776
No 157
>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}
Probab=36.28 E-value=18 Score=29.79 Aligned_cols=91 Identities=16% Similarity=0.189 Sum_probs=58.7
Q ss_pred HHHHHHHHHHhhhCCCCcEEeecCCCCCHHHHhcccC-----CCCcEEEeecCCCCCCCceEEEecC-CCC-CHHHHHHH
Q psy3942 66 DIKHKLFTSVDKIAPASAILASNTSSLSITEIASVTN-----RKDKFVGLHFFNPVPMMKLLEVIRT-NDT-SDATYNAV 138 (160)
Q Consensus 66 ~~K~~v~~~l~~~~~~~~iiasnTS~l~i~~la~~~~-----~p~r~ig~Hf~~P~~~~~lVEvv~~-~~T-~~~~~~~~ 138 (160)
.-=+++++.|.+. .-++.|.|.+...-+..+|..++ -|++|+|..+..-..-.-.-++... +.+ .+.-.+.+
T Consensus 224 p~~~eLi~~L~~~-G~~v~IVSgg~~~~v~~ia~~lg~~y~ip~~~Vig~~l~~~~dG~~tg~~~~~~p~~~~~gK~~~i 302 (385)
T 4gxt_A 224 DEMVDLYRSLEEN-GIDCYIVSASFIDIVRAFATDTNNNYKMKEEKVLGLRLMKDDEGKILPKFDKDFPISIREGKVQTI 302 (385)
T ss_dssp HHHHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHCTTSSCCCCGGGEEEECEEECTTCCEEEEECTTSCCCSTHHHHHHH
T ss_pred HHHHHHHHHHHHC-CCeEEEEcCCcHHHHHHHHHHhCcccCCCcceEEEeEEEEecCCceeeeecCccceeCCCchHHHH
Confidence 3446788888876 68899999999999999998764 2589999876432111222344332 233 33445555
Q ss_pred HHHHH-HcCCeEEEe-cCcCc
Q psy3942 139 TEWGK-SIGKTTIVC-KDTPG 157 (160)
Q Consensus 139 ~~~~~-~lgk~pv~v-~d~pG 157 (160)
.++++ ..|+.|++. .|+.|
T Consensus 303 ~~~~~~~~~~~~i~a~GDs~~ 323 (385)
T 4gxt_A 303 NKLIKNDRNYGPIMVGGDSDG 323 (385)
T ss_dssp HHHTCCTTEECCSEEEECSGG
T ss_pred HHHHHhcCCCCcEEEEECCHh
Confidence 56653 368888886 77654
No 158
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=36.22 E-value=85 Score=24.75 Aligned_cols=86 Identities=13% Similarity=0.120 Sum_probs=55.4
Q ss_pred eccCChHHHHHHHHHHhhhCCCCcEEeecCCCCCHHHHhcccCC-----CCcEEEeecCCCCCCCceEEEecCCCCCHHH
Q psy3942 60 AIVENMDIKHKLFTSVDKIAPASAILASNTSSLSITEIASVTNR-----KDKFVGLHFFNPVPMMKLLEVIRTNDTSDAT 134 (160)
Q Consensus 60 av~E~l~~K~~v~~~l~~~~~~~~iiasnTS~l~i~~la~~~~~-----p~r~ig~Hf~~P~~~~~lVEvv~~~~T~~~~ 134 (160)
+..=+.+.|+++++..-+.+.....+...+++.+..+-....++ .+-++.+ ||+..+ .|.++.
T Consensus 58 ~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~----~P~y~~--------~s~~~l 125 (303)
T 2wkj_A 58 AFVQSLSEREQVLEIVAEEAKGKIKLIAHVGCVSTAESQQLAASAKRYGFDAVSAV----TPFYYP--------FSFEEH 125 (303)
T ss_dssp GGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEE----CCCSSC--------CCHHHH
T ss_pred hhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhCCCCEEEec----CCCCCC--------CCHHHH
Confidence 33445678999999988888777777667777676644332221 2333332 333322 267788
Q ss_pred HHHHHHHHHHcCCeEEEecCcCc
Q psy3942 135 YNAVTEWGKSIGKTTIVCKDTPG 157 (160)
Q Consensus 135 ~~~~~~~~~~lgk~pv~v~d~pG 157 (160)
++.-.++++..+-.||++.+.|+
T Consensus 126 ~~~f~~va~a~~~lPiilYn~P~ 148 (303)
T 2wkj_A 126 CDHYRAIIDSADGLPMVVYNIPA 148 (303)
T ss_dssp HHHHHHHHHHHTTCCEEEEECHH
T ss_pred HHHHHHHHHhCCCCCEEEEeCcc
Confidence 88888888887746999887776
No 159
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=35.84 E-value=87 Score=24.43 Aligned_cols=83 Identities=14% Similarity=0.138 Sum_probs=53.4
Q ss_pred cCChHHHHHHHHHHhhhCCCCcEEeecCCCCCHHHHhcccCC-----CCcEEEeecCCCCCCCceEEEecCCCCCHHHHH
Q psy3942 62 VENMDIKHKLFTSVDKIAPASAILASNTSSLSITEIASVTNR-----KDKFVGLHFFNPVPMMKLLEVIRTNDTSDATYN 136 (160)
Q Consensus 62 ~E~l~~K~~v~~~l~~~~~~~~iiasnTS~l~i~~la~~~~~-----p~r~ig~Hf~~P~~~~~lVEvv~~~~T~~~~~~ 136 (160)
.=+.+.|+++++..-+.+.....+...+++.+..+-....++ .+-++-+ ||+..+ .|.++.++
T Consensus 49 ~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~----~P~y~~--------~s~~~l~~ 116 (289)
T 2yxg_A 49 TLSHEEHKKVIEKVVDVVNGRVQVIAGAGSNCTEEAIELSVFAEDVGADAVLSI----TPYYNK--------PTQEGLRK 116 (289)
T ss_dssp GSCHHHHHHHHHHHHHHHTTSSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEE----CCCSSC--------CCHHHHHH
T ss_pred hCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEEC----CCCCCC--------CCHHHHHH
Confidence 345677899999888887777777677777666644332221 2233332 333332 36678888
Q ss_pred HHHHHHHHcCCeEEEecCcCc
Q psy3942 137 AVTEWGKSIGKTTIVCKDTPG 157 (160)
Q Consensus 137 ~~~~~~~~lgk~pv~v~d~pG 157 (160)
.-.++++..+ .||++.+.|+
T Consensus 117 ~f~~ia~a~~-lPiilYn~P~ 136 (289)
T 2yxg_A 117 HFGKVAESIN-LPIVLYNVPS 136 (289)
T ss_dssp HHHHHHHHCS-SCEEEEECHH
T ss_pred HHHHHHHhcC-CCEEEEeCcc
Confidence 8888888886 5888877775
No 160
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=35.51 E-value=60 Score=24.97 Aligned_cols=48 Identities=17% Similarity=0.133 Sum_probs=29.8
Q ss_pred CceecCChhhhcCCCcEEEEeccCChHHHHHHHHHHhhhCCCCcEEeecCCCCCHH
Q psy3942 40 RIKGSSKVEDSVSQSDLVIEAIVENMDIKHKLFTSVDKIAPASAILASNTSSLSIT 95 (160)
Q Consensus 40 ~i~~~~~~~~al~~adlViEav~E~l~~K~~v~~~l~~~~~~~~iiasnTS~l~i~ 95 (160)
.+..++|+++.+ ++|+|||... ...++..++ ...+..+.+.|.+++-.
T Consensus 42 gv~v~~dl~~l~-~~DVvIDft~-----p~a~~~~~~--l~~g~~vVigTTG~s~e 89 (243)
T 3qy9_A 42 PYQQYQHIADVK-GADVAIDFSN-----PNLLFPLLD--EDFHLPLVVATTGEKEK 89 (243)
T ss_dssp CSCBCSCTTTCT-TCSEEEECSC-----HHHHHHHHT--SCCCCCEEECCCSSHHH
T ss_pred CCceeCCHHHHh-CCCEEEEeCC-----hHHHHHHHH--HhcCCceEeCCCCCCHH
Confidence 355678886555 9999998763 233444444 45555555566677654
No 161
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=35.12 E-value=36 Score=26.62 Aligned_cols=51 Identities=8% Similarity=0.052 Sum_probs=31.2
Q ss_pred ceecCChhhhcCCCcEEEEeccCChHHHHHHHHHHhhhCCCCcEEeecCCCCCHHH
Q psy3942 41 IKGSSKVEDSVSQSDLVIEAIVENMDIKHKLFTSVDKIAPASAILASNTSSLSITE 96 (160)
Q Consensus 41 i~~~~~~~~al~~adlViEav~E~l~~K~~v~~~l~~~~~~~~iiasnTS~l~i~~ 96 (160)
+..++|+++.+.++|+|||+.+ .+ ..+..+...+..+.-+.+.|.+++..+
T Consensus 60 v~~~~dl~~~l~~~DvVIDft~--p~---~~~~~~~~a~~~G~~vVigTtG~~~e~ 110 (273)
T 1dih_A 60 VTVQSSLDAVKDDFDVFIDFTR--PE---GTLNHLAFCRQHGKGMVIGTTGFDEAG 110 (273)
T ss_dssp CCEESCSTTTTTSCSEEEECSC--HH---HHHHHHHHHHHTTCEEEECCCCCCHHH
T ss_pred ceecCCHHHHhcCCCEEEEcCC--hH---HHHHHHHHHHhCCCCEEEECCCCCHHH
Confidence 3446778767789999998874 22 344444444444554555444777663
No 162
>1wky_A Endo-beta-1,4-mannanase; TIM barrel, catalytic domain, CBM, hydrolase; 1.65A {Bacillus SP} SCOP: b.18.1.31 c.1.8.3
Probab=34.75 E-value=1.5e+02 Score=24.77 Aligned_cols=87 Identities=7% Similarity=0.136 Sum_probs=48.8
Q ss_pred cEEEEeccCCh---------HHHHHHHHHHhhhCCCCcEEeec--CCCCCH------HHHhcccCCCCcEEEeecCCCCC
Q psy3942 55 DLVIEAIVENM---------DIKHKLFTSVDKIAPASAILASN--TSSLSI------TEIASVTNRKDKFVGLHFFNPVP 117 (160)
Q Consensus 55 dlViEav~E~l---------~~K~~v~~~l~~~~~~~~iiasn--TS~l~i------~~la~~~~~p~r~ig~Hf~~P~~ 117 (160)
-+++|-..|.. +.=++++..|.+.-+...|+... -+...- .++...-....-++.+|+|.|.
T Consensus 124 ~Vi~eL~NEP~~~~~~~~w~~~~~~~i~aIR~~dp~~~I~v~g~~w~~~~~~~~~~~~~l~~~dp~~niv~s~H~Y~~~- 202 (464)
T 1wky_A 124 TVIINIANEWFGSWDGAAWADGYKQAIPRLRNAGLNNTLMIDAAGWGQFPQSIHDYGREVFNADPQRNTMFSIHMYEYA- 202 (464)
T ss_dssp TEEEECCTTCCCSSCHHHHHHHHHHHHHHHHHTTCCSCEEEECBTTTTBTHHHHHHHHHHHHTCTTCCEEEEEEESTTT-
T ss_pred eEEEEeccCCCCCCCHHHHHHHHHHHHHHHHhcCCCCEEEEcCCCcCcccccccccchhccccCCCCCEEEEEEEECCC-
Confidence 45677777753 33356778888775555555542 222221 1232111122458899999753
Q ss_pred CCceEEEecCCCCCHHHHHHHHHHHHHcCCeEEEecC
Q psy3942 118 MMKLLEVIRTNDTSDATYNAVTEWGKSIGKTTIVCKD 154 (160)
Q Consensus 118 ~~~lVEvv~~~~T~~~~~~~~~~~~~~lgk~pv~v~d 154 (160)
.|+++.+......+...|+ |+++.|
T Consensus 203 -----------g~~~~~i~~~~~~~~~~g~-Pv~igE 227 (464)
T 1wky_A 203 -----------GGNASQVRTNIDRVLNQDL-ALVIGE 227 (464)
T ss_dssp -----------SSSHHHHHHHHHHHHTTTC-CEEEEE
T ss_pred -----------CCCHHHHHHHHHHHHHcCC-CEEEEC
Confidence 3556666665555666665 777644
No 163
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=34.67 E-value=56 Score=21.42 Aligned_cols=39 Identities=15% Similarity=0.158 Sum_probs=25.4
Q ss_pred cCCCcEEEEeccCChHHHHHHHHHHhhhCCCCcEEeecCC
Q psy3942 51 VSQSDLVIEAIVENMDIKHKLFTSVDKIAPASAILASNTS 90 (160)
Q Consensus 51 l~~adlViEav~E~l~~K~~v~~~l~~~~~~~~iiasnTS 90 (160)
+.++|+|+.+++.+.+....+...+... .+..+++..++
T Consensus 68 ~~~~d~vi~~~~~~~~~~~~~~~~~~~~-~~~~ii~~~~~ 106 (144)
T 2hmt_A 68 IRNFEYVIVAIGANIQASTLTTLLLKEL-DIPNIWVKAQN 106 (144)
T ss_dssp GGGCSEEEECCCSCHHHHHHHHHHHHHT-TCSEEEEECCS
T ss_pred CCCCCEEEECCCCchHHHHHHHHHHHHc-CCCeEEEEeCC
Confidence 5789999999998766555555555554 44566654433
No 164
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=33.95 E-value=1.2e+02 Score=23.74 Aligned_cols=84 Identities=14% Similarity=0.112 Sum_probs=54.0
Q ss_pred ccCChHHHHHHHHHHhhhCCCCcEEeecCCCCCHHHHhcccC-----CCCcEEEeecCCCCCCCceEEEecCCCCCHHHH
Q psy3942 61 IVENMDIKHKLFTSVDKIAPASAILASNTSSLSITEIASVTN-----RKDKFVGLHFFNPVPMMKLLEVIRTNDTSDATY 135 (160)
Q Consensus 61 v~E~l~~K~~v~~~l~~~~~~~~iiasnTS~l~i~~la~~~~-----~p~r~ig~Hf~~P~~~~~lVEvv~~~~T~~~~~ 135 (160)
..=+.+.|+++++..-+.+.....+...+++.+..+-....+ ..+-++-+ ||+..+ .|.++.+
T Consensus 48 ~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~----~P~y~~--------~s~~~l~ 115 (294)
T 2ehh_A 48 PTLTFEEHEKVIEFAVKRAAGRIKVIAGTGGNATHEAVHLTAHAKEVGADGALVV----VPYYNK--------PTQRGLY 115 (294)
T ss_dssp GGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEE----CCCSSC--------CCHHHHH
T ss_pred hhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEEC----CCCCCC--------CCHHHHH
Confidence 334567799999988888777776767777777664433222 12333332 333332 3677888
Q ss_pred HHHHHHHHHcCCeEEEecCcCc
Q psy3942 136 NAVTEWGKSIGKTTIVCKDTPG 157 (160)
Q Consensus 136 ~~~~~~~~~lgk~pv~v~d~pG 157 (160)
+.-.++++..+ .||++.+.|+
T Consensus 116 ~~f~~va~a~~-lPiilYn~P~ 136 (294)
T 2ehh_A 116 EHFKTVAQEVD-IPIIIYNIPS 136 (294)
T ss_dssp HHHHHHHHHCC-SCEEEEECHH
T ss_pred HHHHHHHHhcC-CCEEEEeCCc
Confidence 88888888886 5998887775
No 165
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=33.14 E-value=25 Score=27.91 Aligned_cols=82 Identities=9% Similarity=0.120 Sum_probs=46.1
Q ss_pred ChHHHHHHHHHHhhhCCCCcEEeecCCCCCHHHHhcccC-----CCCcEEEeecCCCCCCCceEEEecCCCCCHHHHHHH
Q psy3942 64 NMDIKHKLFTSVDKIAPASAILASNTSSLSITEIASVTN-----RKDKFVGLHFFNPVPMMKLLEVIRTNDTSDATYNAV 138 (160)
Q Consensus 64 ~l~~K~~v~~~l~~~~~~~~iiasnTS~l~i~~la~~~~-----~p~r~ig~Hf~~P~~~~~lVEvv~~~~T~~~~~~~~ 138 (160)
+.+.|+++++..-+.++....+...+++.+..+-....+ ..+-++-+ ||+..+ .|.++.++.-
T Consensus 55 s~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~----~P~y~~--------~~~~~l~~~f 122 (300)
T 3eb2_A 55 GTAQREAVVRATIEAAQRRVPVVAGVASTSVADAVAQAKLYEKLGADGILAI----LEAYFP--------LKDAQIESYF 122 (300)
T ss_dssp CHHHHHHHHHHHHHHHTTSSCBEEEEEESSHHHHHHHHHHHHHHTCSEEEEE----ECCSSC--------CCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEc----CCCCCC--------CCHHHHHHHH
Confidence 456678888877777666654443444445443322221 12223322 222222 2567777777
Q ss_pred HHHHHHcCCeEEEecCcCcc
Q psy3942 139 TEWGKSIGKTTIVCKDTPGF 158 (160)
Q Consensus 139 ~~~~~~lgk~pv~v~d~pGf 158 (160)
.++++..+ .||++.+.|+.
T Consensus 123 ~~va~a~~-lPiilYn~P~~ 141 (300)
T 3eb2_A 123 RAIADAVE-IPVVIYTNPQF 141 (300)
T ss_dssp HHHHHHCS-SCEEEEECTTT
T ss_pred HHHHHHCC-CCEEEEECccc
Confidence 78887776 68888777763
No 166
>4h31_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PE5; 1.70A {Vibrio vulnificus} PDB: 3upd_A*
Probab=32.55 E-value=69 Score=26.23 Aligned_cols=20 Identities=20% Similarity=0.373 Sum_probs=18.1
Q ss_pred cCceecCChhhhcCCCcEEE
Q psy3942 39 SRIKGSSKVEDSVSQSDLVI 58 (160)
Q Consensus 39 ~~i~~~~~~~~al~~adlVi 58 (160)
.+++.++|+++++++||+|.
T Consensus 236 ~~v~~~~d~~eav~~aDvvy 255 (358)
T 4h31_A 236 GKITLTENVAEGVQGCDFLY 255 (358)
T ss_dssp CEEEEESCHHHHHTTCSEEE
T ss_pred CcceeccCHHHHhccCcEEE
Confidence 57889999989999999997
No 167
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=32.54 E-value=86 Score=24.52 Aligned_cols=83 Identities=14% Similarity=0.123 Sum_probs=50.5
Q ss_pred cCChHHHHHHHHHHhhhCCCCcEEeecCCCCCHHHHhcccC-----CCCcEEEeecCCCCCCCceEEEecCCCCCHHHHH
Q psy3942 62 VENMDIKHKLFTSVDKIAPASAILASNTSSLSITEIASVTN-----RKDKFVGLHFFNPVPMMKLLEVIRTNDTSDATYN 136 (160)
Q Consensus 62 ~E~l~~K~~v~~~l~~~~~~~~iiasnTS~l~i~~la~~~~-----~p~r~ig~Hf~~P~~~~~lVEvv~~~~T~~~~~~ 136 (160)
.=+.+.|+++++..-+.+.....+...+++.+..+-....+ ..+-++.+ ||+..+ .|.++.++
T Consensus 49 ~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~----~P~y~~--------~s~~~l~~ 116 (292)
T 2vc6_A 49 TLSKSEHEQVVEITIKTANGRVPVIAGAGSNSTAEAIAFVRHAQNAGADGVLIV----SPYYNK--------PTQEGIYQ 116 (292)
T ss_dssp GSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEE----CCCSSC--------CCHHHHHH
T ss_pred hCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHHcCCCEEEEc----CCCCCC--------CCHHHHHH
Confidence 33566788898888887776665555666666554332221 12223322 233322 26677788
Q ss_pred HHHHHHHHcCCeEEEecCcCc
Q psy3942 137 AVTEWGKSIGKTTIVCKDTPG 157 (160)
Q Consensus 137 ~~~~~~~~lgk~pv~v~d~pG 157 (160)
.-.++++..+ .||++.+.|+
T Consensus 117 ~f~~ia~a~~-lPiilYn~P~ 136 (292)
T 2vc6_A 117 HFKAIDAAST-IPIIVYNIPG 136 (292)
T ss_dssp HHHHHHHHCS-SCEEEEECHH
T ss_pred HHHHHHHhCC-CCEEEEeCcc
Confidence 7888888776 5888877775
No 168
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=32.42 E-value=15 Score=30.05 Aligned_cols=62 Identities=15% Similarity=0.133 Sum_probs=41.3
Q ss_pred ceecCChhhhcCCCcEEEEeccCChHHHHHHHHHHhhhCCCCcEEeecCCC--CCHHHHhcccC
Q psy3942 41 IKGSSKVEDSVSQSDLVIEAIVENMDIKHKLFTSVDKIAPASAILASNTSS--LSITEIASVTN 102 (160)
Q Consensus 41 i~~~~~~~~al~~adlViEav~E~l~~K~~v~~~l~~~~~~~~iiasnTS~--l~i~~la~~~~ 102 (160)
+....++++.++++|+|+-++|-+-+.+.-+-++.-+.++++++|...+.+ +.-.+|...+.
T Consensus 209 ~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~ga~lIn~arG~~vd~~aL~~aL~ 272 (364)
T 2j6i_A 209 ARRVENIEELVAQADIVTVNAPLHAGTKGLINKELLSKFKKGAWLVNTARGAICVAEDVAAALE 272 (364)
T ss_dssp EEECSSHHHHHHTCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred cEecCCHHHHHhcCCEEEECCCCChHHHHHhCHHHHhhCCCCCEEEECCCCchhCHHHHHHHHH
Confidence 445567877789999999999987665554434444567888877644443 34456666654
No 169
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=32.32 E-value=1.2e+02 Score=23.87 Aligned_cols=88 Identities=14% Similarity=0.090 Sum_probs=55.8
Q ss_pred EeccCChHHHHHHHHHHhhhCCCCcEEeecCCCCCHHHHhcccC-----CCCcEEEeecCCCCCCCceEEEecCCCCCHH
Q psy3942 59 EAIVENMDIKHKLFTSVDKIAPASAILASNTSSLSITEIASVTN-----RKDKFVGLHFFNPVPMMKLLEVIRTNDTSDA 133 (160)
Q Consensus 59 Eav~E~l~~K~~v~~~l~~~~~~~~iiasnTS~l~i~~la~~~~-----~p~r~ig~Hf~~P~~~~~lVEvv~~~~T~~~ 133 (160)
|+..=+.+.|+++++..-+.++....+...+++.+..+-....+ ..+-++-+ ||+..+ ...|.++
T Consensus 60 E~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~----~P~y~~------~~~s~~~ 129 (307)
T 3s5o_A 60 EFPFLTSSERLEVVSRVRQAMPKNRLLLAGSGCESTQATVEMTVSMAQVGADAAMVV----TPCYYR------GRMSSAA 129 (307)
T ss_dssp TGGGSCHHHHHHHHHHHHHTSCTTSEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEE----CCCTTG------GGCCHHH
T ss_pred chhhCCHHHHHHHHHHHHHHcCCCCcEEEecCCCCHHHHHHHHHHHHHcCCCEEEEc----CCCcCC------CCCCHHH
Confidence 34444678899999999988887776666777766664333221 12333332 222221 1146778
Q ss_pred HHHHHHHHHHHcCCeEEEecCcCc
Q psy3942 134 TYNAVTEWGKSIGKTTIVCKDTPG 157 (160)
Q Consensus 134 ~~~~~~~~~~~lgk~pv~v~d~pG 157 (160)
.++.-.++++..+ .||++.+.|+
T Consensus 130 l~~~f~~ia~a~~-lPiilYn~P~ 152 (307)
T 3s5o_A 130 LIHHYTKVADLSP-IPVVLYSVPA 152 (307)
T ss_dssp HHHHHHHHHHHCS-SCEEEEECHH
T ss_pred HHHHHHHHHhhcC-CCEEEEeCCc
Confidence 8888888888876 5999887776
No 170
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=32.28 E-value=38 Score=26.67 Aligned_cols=104 Identities=10% Similarity=0.157 Sum_probs=55.9
Q ss_pred CceecCChhhhcCCCcEEEEeccCChHHHHHHHHHHhhhCCCCcEEeecCCCCCHH---HHhcccC--CCCcEEEeecCC
Q psy3942 40 RIKGSSKVEDSVSQSDLVIEAIVENMDIKHKLFTSVDKIAPASAILASNTSSLSIT---EIASVTN--RKDKFVGLHFFN 114 (160)
Q Consensus 40 ~i~~~~~~~~al~~adlViEav~E~l~~K~~v~~~l~~~~~~~~iiasnTS~l~i~---~la~~~~--~p~r~ig~Hf~~ 114 (160)
+++.+++.++ +.++|+||=|++ ...++ +++..+.. +++++.|-+.+++.. .+++.+. .+.. +.-...
T Consensus 68 ~~~~~~~~~~-~~~aDvVil~vk-~~~~~-~v~~~l~~---~~~~vv~~~nGi~~~~~~~l~~~~~~~~~~~--~~~~~~ 139 (335)
T 1z82_A 68 TVRATNDLEE-IKKEDILVIAIP-VQYIR-EHLLRLPV---KPSMVLNLSKGIEIKTGKRVSEIVEEILGCP--YAVLSG 139 (335)
T ss_dssp CSEEESCGGG-CCTTEEEEECSC-GGGHH-HHHTTCSS---CCSEEEECCCCCCTTTCCCHHHHHHHHTCCC--EEEEES
T ss_pred eEEEeCCHHH-hcCCCEEEEECC-HHHHH-HHHHHhCc---CCCEEEEEeCCCCCCccCcHHHHHHHHcCCc--eEEEEC
Confidence 4677788866 899999999998 34333 34444433 677766555444432 2222211 1211 111233
Q ss_pred CCCC-----CceEEEecCCCCCHHHHHHHHHHHHHcCCeEEEecCc
Q psy3942 115 PVPM-----MKLLEVIRTNDTSDATYNAVTEWGKSIGKTTIVCKDT 155 (160)
Q Consensus 115 P~~~-----~~lVEvv~~~~T~~~~~~~~~~~~~~lgk~pv~v~d~ 155 (160)
|... ..+.-++.+.. + .+.+..++...|..+....|.
T Consensus 140 P~~~~~~~~g~~~~~~~g~~-~---~~~~~~ll~~~g~~~~~~~di 181 (335)
T 1z82_A 140 PSHAEEVAKKLPTAVTLAGE-N---SKELQKRISTEYFRVYTCEDV 181 (335)
T ss_dssp SCCHHHHHTTCCEEEEEEET-T---HHHHHHHHCCSSEEEEEESCH
T ss_pred CccHHHHhCCCceEEEEEeh-h---HHHHHHHhCCCCEEEEecCch
Confidence 4321 11122232221 2 678888998899887776664
No 171
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=31.18 E-value=1.1e+02 Score=23.87 Aligned_cols=81 Identities=11% Similarity=0.183 Sum_probs=52.8
Q ss_pred ChHHHHHHHHHHhhhCCCCcEEeecCCCCCHHHHhcccCC-----CCcEEEeecCCCCCCCceEEEecCCCCCHHHHHHH
Q psy3942 64 NMDIKHKLFTSVDKIAPASAILASNTSSLSITEIASVTNR-----KDKFVGLHFFNPVPMMKLLEVIRTNDTSDATYNAV 138 (160)
Q Consensus 64 ~l~~K~~v~~~l~~~~~~~~iiasnTS~l~i~~la~~~~~-----p~r~ig~Hf~~P~~~~~lVEvv~~~~T~~~~~~~~ 138 (160)
+.+.|+++++..-+.+.....+...+++.+..+-....++ .+-++-+ ||+..+ .|.++.++.-
T Consensus 58 s~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~----~P~y~~--------~~~~~l~~~f 125 (297)
T 3flu_A 58 SVEEHTAVIEAVVKHVAKRVPVIAGTGANNTVEAIALSQAAEKAGADYTLSV----VPYYNK--------PSQEGIYQHF 125 (297)
T ss_dssp CHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEE----CCCSSC--------CCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEEC----CCCCCC--------CCHHHHHHHH
Confidence 5678999999888887777666667777777654332221 2333332 223322 2567888888
Q ss_pred HHHHHHcCCeEEEecCcCc
Q psy3942 139 TEWGKSIGKTTIVCKDTPG 157 (160)
Q Consensus 139 ~~~~~~lgk~pv~v~d~pG 157 (160)
.++++..+ .||++.+.|+
T Consensus 126 ~~va~a~~-lPiilYn~P~ 143 (297)
T 3flu_A 126 KTIAEATS-IPMIIYNVPG 143 (297)
T ss_dssp HHHHHHCC-SCEEEEECHH
T ss_pred HHHHHhCC-CCEEEEECCc
Confidence 88888885 5999888776
No 172
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=30.80 E-value=15 Score=29.58 Aligned_cols=62 Identities=6% Similarity=0.012 Sum_probs=39.5
Q ss_pred ceecCChhhhcCCCcEEEEeccCChHHHHHHHHHHhhhCCCCcEEeecCCC--CCHHHHhcccC
Q psy3942 41 IKGSSKVEDSVSQSDLVIEAIVENMDIKHKLFTSVDKIAPASAILASNTSS--LSITEIASVTN 102 (160)
Q Consensus 41 i~~~~~~~~al~~adlViEav~E~l~~K~~v~~~l~~~~~~~~iiasnTS~--l~i~~la~~~~ 102 (160)
+.+..++++.++++|+|+-++|-+-+.+.-+-++.-+.++++++|..-+++ +.-.+|...+.
T Consensus 187 ~~~~~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lIn~arg~~vd~~aL~~aL~ 250 (333)
T 1j4a_A 187 GYYVDSLDDLYKQADVISLHVPDVPANVHMINDESIAKMKQDVVIVNVSRGPLVDTDAVIRGLD 250 (333)
T ss_dssp TCBCSCHHHHHHHCSEEEECSCCCGGGTTCBSHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred CeecCCHHHHHhhCCEEEEcCCCcHHHHHHHhHHHHhhCCCCcEEEECCCCcccCHHHHHHHHH
Confidence 445557877789999999999977665532223333456788877654433 34456666554
No 173
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=30.69 E-value=38 Score=28.76 Aligned_cols=93 Identities=11% Similarity=0.139 Sum_probs=54.7
Q ss_pred CceecCChhhhcC--CCcEEEEeccCChHHHHHHHHHHhhhCCCCcEEeecCCCCCHH---HHhcccCCCCcEEEeecCC
Q psy3942 40 RIKGSSKVEDSVS--QSDLVIEAIVENMDIKHKLFTSVDKIAPASAILASNTSSLSIT---EIASVTNRKDKFVGLHFFN 114 (160)
Q Consensus 40 ~i~~~~~~~~al~--~adlViEav~E~l~~K~~v~~~l~~~~~~~~iiasnTS~l~i~---~la~~~~~p~r~ig~Hf~~ 114 (160)
.+.+++|+++.++ +.|+|++|.+-..--..-..+.|++ ..+.+.. |. .+.+. +|....+....++.+-
T Consensus 92 ~~~v~~D~eeLL~d~dIDaVviaTp~p~~H~e~a~~AL~A--GKHVv~~-nk-~l~~~eg~eL~~~A~e~Gvvl~~~--- 164 (446)
T 3upl_A 92 KIAVTDDNDLILSNPLIDVIIDATGIPEVGAETGIAAIRN--GKHLVMM-NV-EADVTIGPYLKAQADKQGVIYSLG--- 164 (446)
T ss_dssp CEEEESCHHHHHTCTTCCEEEECSCCHHHHHHHHHHHHHT--TCEEEEC-CH-HHHHHHHHHHHHHHHHHTCCEEEC---
T ss_pred CceEECCHHHHhcCCCCCEEEEcCCChHHHHHHHHHHHHc--CCcEEec-Cc-ccCHHHHHHHHHHHHHhCCeeeec---
Confidence 4667889976665 5899999997642223444444444 4455433 33 22222 3333332233333221
Q ss_pred CCCCCceEEEecCCCCCHHHHHHHHHHHHHcCCeEEEe
Q psy3942 115 PVPMMKLLEVIRTNDTSDATYNAVTEWGKSIGKTTIVC 152 (160)
Q Consensus 115 P~~~~~lVEvv~~~~T~~~~~~~~~~~~~~lgk~pv~v 152 (160)
.+-.+..+..+.+|++.+|..++.+
T Consensus 165 -------------~gdqp~~~~eLv~~a~~~G~~~v~~ 189 (446)
T 3upl_A 165 -------------AGDEPSSCMELIEFVSALGYEVVSA 189 (446)
T ss_dssp -------------TTSHHHHHHHHHHHHHHTTCEEEEE
T ss_pred -------------CCcchHHHHHHHHHHHhCCCeEEEe
Confidence 1333677888999999999999987
No 174
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=30.30 E-value=13 Score=30.29 Aligned_cols=62 Identities=18% Similarity=0.112 Sum_probs=39.8
Q ss_pred ceecCChhhhcCCCcEEEEeccCChHHHHHHHHHHhhhCCCCcEEeecCCC--CCHHHHhcccC
Q psy3942 41 IKGSSKVEDSVSQSDLVIEAIVENMDIKHKLFTSVDKIAPASAILASNTSS--LSITEIASVTN 102 (160)
Q Consensus 41 i~~~~~~~~al~~adlViEav~E~l~~K~~v~~~l~~~~~~~~iiasnTS~--l~i~~la~~~~ 102 (160)
+....++++.++++|+|+-++|-+-+.+.-+-++.-+.++++++|...+++ +.-.+|...+.
T Consensus 211 ~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~~vd~~aL~~aL~ 274 (347)
T 1mx3_A 211 LQRVSTLQDLLFHSDCVTLHCGLNEHNHHLINDFTVKQMRQGAFLVNTARGGLVDEKALAQALK 274 (347)
T ss_dssp CEECSSHHHHHHHCSEEEECCCCCTTCTTSBSHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHH
T ss_pred CeecCCHHHHHhcCCEEEEcCCCCHHHHHHhHHHHHhcCCCCCEEEECCCChHHhHHHHHHHHH
Confidence 344557877789999999999976555433323444567888877644443 34446666553
No 175
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=30.17 E-value=21 Score=29.19 Aligned_cols=63 Identities=5% Similarity=0.095 Sum_probs=42.3
Q ss_pred CceecCChhhhcCCCcEEEEeccCChHHHHHHHHHHhhhCCCCcEEeecC--CCCCHHHHhcccC
Q psy3942 40 RIKGSSKVEDSVSQSDLVIEAIVENMDIKHKLFTSVDKIAPASAILASNT--SSLSITEIASVTN 102 (160)
Q Consensus 40 ~i~~~~~~~~al~~adlViEav~E~l~~K~~v~~~l~~~~~~~~iiasnT--S~l~i~~la~~~~ 102 (160)
.+...+++++.++++|+|+=++|-+-+.+.-+-++.=+.++++++|...+ +-+.-..|...+.
T Consensus 207 g~~~~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~ 271 (351)
T 3jtm_A 207 GAKFVEDLNEMLPKCDVIVINMPLTEKTRGMFNKELIGKLKKGVLIVNNARGAIMERQAVVDAVE 271 (351)
T ss_dssp CCEECSCHHHHGGGCSEEEECSCCCTTTTTCBSHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred CCeEcCCHHHHHhcCCEEEECCCCCHHHHHhhcHHHHhcCCCCCEEEECcCchhhCHHHHHHHHH
Confidence 35566788888999999999999766655444455555678888776333 2344456666654
No 176
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=30.02 E-value=1.1e+02 Score=24.10 Aligned_cols=85 Identities=14% Similarity=0.145 Sum_probs=53.4
Q ss_pred eccCChHHHHHHHHHHhhhCCCCcEEeecCCCCCHHHHhcccC-----CCCcEEEeecCCCCCCCceEEEecCCCCCHHH
Q psy3942 60 AIVENMDIKHKLFTSVDKIAPASAILASNTSSLSITEIASVTN-----RKDKFVGLHFFNPVPMMKLLEVIRTNDTSDAT 134 (160)
Q Consensus 60 av~E~l~~K~~v~~~l~~~~~~~~iiasnTS~l~i~~la~~~~-----~p~r~ig~Hf~~P~~~~~lVEvv~~~~T~~~~ 134 (160)
+..=+.+.|+++++..-+.+.....+...+++.+..+-....+ ..+-++.+ ||+..+ .|.++.
T Consensus 59 ~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~----~P~y~~--------~s~~~l 126 (301)
T 1xky_A 59 SPTLTSEEKVALYRHVVSVVDKRVPVIAGTGSNNTHASIDLTKKATEVGVDAVMLV----APYYNK--------PSQEGM 126 (301)
T ss_dssp GGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHTTCSEEEEE----CCCSSC--------CCHHHH
T ss_pred hhhCCHHHHHHHHHHHHHHhCCCceEEeCCCCCCHHHHHHHHHHHHhcCCCEEEEc----CCCCCC--------CCHHHH
Confidence 3344567899999988888877776666677766654333221 12223322 233322 266777
Q ss_pred HHHHHHHHHHcCCeEEEecCcCc
Q psy3942 135 YNAVTEWGKSIGKTTIVCKDTPG 157 (160)
Q Consensus 135 ~~~~~~~~~~lgk~pv~v~d~pG 157 (160)
++.-.++++..+ .||++.+.|+
T Consensus 127 ~~~f~~va~a~~-lPiilYn~P~ 148 (301)
T 1xky_A 127 YQHFKAIAESTP-LPVMLYNVPG 148 (301)
T ss_dssp HHHHHHHHHTCS-SCEEEEECHH
T ss_pred HHHHHHHHHhcC-CCEEEEeCcc
Confidence 888888888775 5998887775
No 177
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=29.87 E-value=40 Score=26.55 Aligned_cols=83 Identities=7% Similarity=0.025 Sum_probs=49.2
Q ss_pred eccCChHHHHHHHHHHhhhCCCCcEEeecCCCCCHHH---HhcccC--CCCcEEEeecCCCCCCCceEEEecCCCCCHHH
Q psy3942 60 AIVENMDIKHKLFTSVDKIAPASAILASNTSSLSITE---IASVTN--RKDKFVGLHFFNPVPMMKLLEVIRTNDTSDAT 134 (160)
Q Consensus 60 av~E~l~~K~~v~~~l~~~~~~~~iiasnTS~l~i~~---la~~~~--~p~r~ig~Hf~~P~~~~~lVEvv~~~~T~~~~ 134 (160)
+..=+.+.|+++++..-+.+.. +|+ .+++.+..+ ++.... ..+-++.+ ||+..+. .|.++.
T Consensus 46 ~~~Ls~eEr~~v~~~~~~~~~g--via-Gvg~~~t~~ai~la~~A~~~Gadavlv~----~P~y~~~-------~s~~~l 111 (293)
T 1w3i_A 46 GPSLSPEEKLENLKAVYDVTNK--IIF-QVGGLNLDDAIRLAKLSKDFDIVGIASY----APYYYPR-------MSEKHL 111 (293)
T ss_dssp GGGSCHHHHHHHHHHHHTTCSC--EEE-ECCCSCHHHHHHHHHHGGGSCCSEEEEE----CCCSCSS-------CCHHHH
T ss_pred hhhCCHHHHHHHHHHHHHHcCC--EEE-ecCCCCHHHHHHHHHHHHhcCCCEEEEc----CCCCCCC-------CCHHHH
Confidence 3334567899999998888766 443 344444443 332221 12223332 2332220 267888
Q ss_pred HHHHHHHHHHcCCeEEEecCcCc
Q psy3942 135 YNAVTEWGKSIGKTTIVCKDTPG 157 (160)
Q Consensus 135 ~~~~~~~~~~lgk~pv~v~d~pG 157 (160)
++.-.++++..+ .||++.+.|+
T Consensus 112 ~~~f~~va~a~~-lPiilYn~P~ 133 (293)
T 1w3i_A 112 VKYFKTLCEVSP-HPVYLYNYPT 133 (293)
T ss_dssp HHHHHHHHHHCS-SCEEEEECHH
T ss_pred HHHHHHHHhhCC-CCEEEEECch
Confidence 888888888886 4999988775
No 178
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=28.93 E-value=19 Score=29.15 Aligned_cols=58 Identities=5% Similarity=-0.093 Sum_probs=38.6
Q ss_pred CChhhhcCCCcEEEEeccCChHHHHHHHHHHhhhCCCCcEEeecCCCCCH--HHHhcccC
Q psy3942 45 SKVEDSVSQSDLVIEAIVENMDIKHKLFTSVDKIAPASAILASNTSSLSI--TEIASVTN 102 (160)
Q Consensus 45 ~~~~~al~~adlViEav~E~l~~K~~v~~~l~~~~~~~~iiasnTS~l~i--~~la~~~~ 102 (160)
.++++.++++|+|+-++|-+-+.+.-+-+++-+.++++++|.-.+++-.+ .+|...+.
T Consensus 211 ~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~vvd~~aL~~aL~ 270 (335)
T 2g76_A 211 LPLEEIWPLCDFITVHTPLLPSTTGLLNDNTFAQCKKGVRVVNCARGGIVDEGALLRALQ 270 (335)
T ss_dssp CCHHHHGGGCSEEEECCCCCTTTTTSBCHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHH
T ss_pred CCHHHHHhcCCEEEEecCCCHHHHHhhCHHHHhhCCCCcEEEECCCccccCHHHHHHHHH
Confidence 36777889999999999988766553334445567888877644444333 35666553
No 179
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=28.31 E-value=95 Score=24.43 Aligned_cols=53 Identities=9% Similarity=0.134 Sum_probs=34.7
Q ss_pred ceecCChhhhcCCCcEEEEeccCChHHHHHHHHHHhhhCCCCcEEeecCCCCCHHHH
Q psy3942 41 IKGSSKVEDSVSQSDLVIEAIVENMDIKHKLFTSVDKIAPASAILASNTSSLSITEI 97 (160)
Q Consensus 41 i~~~~~~~~al~~adlViEav~E~l~~K~~v~~~l~~~~~~~~iiasnTS~l~i~~l 97 (160)
+..++|+++.+.++|+|+.|++-.... ..+...|+. .-.++.+.+.++++.++
T Consensus 46 v~~~~d~~~ll~~~DvViiatp~~~h~-~~~~~al~a---G~~Vv~ekp~~~~~~~~ 98 (320)
T 1f06_A 46 VFDVADVDKHADDVDVLFLCMGSATDI-PEQAPKFAQ---FACTVDTYDNHRDIPRH 98 (320)
T ss_dssp EEEGGGGGGTTTTCSEEEECSCTTTHH-HHHHHHHTT---TSEEECCCCCGGGHHHH
T ss_pred CceeCCHHHHhcCCCEEEEcCCcHHHH-HHHHHHHHC---CCEEEECCCCcCCHHHH
Confidence 455678865557899999999887642 223333332 33477777777777766
No 180
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=28.27 E-value=1e+02 Score=24.73 Aligned_cols=86 Identities=12% Similarity=0.174 Sum_probs=55.6
Q ss_pred EeccCChHHHHHHHHHHhhhCCCCcEEeecCCCCCHHHHhcccCC-----CCcEEEeecCCCCCCCceEEEecCCCCCHH
Q psy3942 59 EAIVENMDIKHKLFTSVDKIAPASAILASNTSSLSITEIASVTNR-----KDKFVGLHFFNPVPMMKLLEVIRTNDTSDA 133 (160)
Q Consensus 59 Eav~E~l~~K~~v~~~l~~~~~~~~iiasnTS~l~i~~la~~~~~-----p~r~ig~Hf~~P~~~~~lVEvv~~~~T~~~ 133 (160)
|+..=+.+.|+++++..-+.+.....+...+++.+..+.....++ .+-++.+ ||+..+ .|.++
T Consensus 80 E~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~----~P~Y~~--------~s~~~ 147 (332)
T 2r8w_A 80 IYMYLTREERRRAIEAAATILRGRRTLMAGIGALRTDEAVALAKDAEAAGADALLLA----PVSYTP--------LTQEE 147 (332)
T ss_dssp TGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECCSSHHHHHHHHHHHHHHTCSEEEEC----CCCSSC--------CCHHH
T ss_pred ChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEEC----CCCCCC--------CCHHH
Confidence 444556778999999988888777766556666665543332221 2223222 334333 36678
Q ss_pred HHHHHHHHHHHcCCeEEEecCcCc
Q psy3942 134 TYNAVTEWGKSIGKTTIVCKDTPG 157 (160)
Q Consensus 134 ~~~~~~~~~~~lgk~pv~v~d~pG 157 (160)
.++.-.++++..+ .||++.+.|+
T Consensus 148 l~~~f~~VA~a~~-lPiilYn~P~ 170 (332)
T 2r8w_A 148 AYHHFAAVAGATA-LPLAIYNNPT 170 (332)
T ss_dssp HHHHHHHHHHHCS-SCEEEECCHH
T ss_pred HHHHHHHHHHhcC-CCEEEEeCcc
Confidence 8888888888886 5999988875
No 181
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=27.94 E-value=90 Score=24.82 Aligned_cols=86 Identities=13% Similarity=0.137 Sum_probs=55.4
Q ss_pred EeccCChHHHHHHHHHHhhhCCCCcEEeecCCCCCHHHHhcccCC-----CCcEEEeecCCCCCCCceEEEecCCCCCHH
Q psy3942 59 EAIVENMDIKHKLFTSVDKIAPASAILASNTSSLSITEIASVTNR-----KDKFVGLHFFNPVPMMKLLEVIRTNDTSDA 133 (160)
Q Consensus 59 Eav~E~l~~K~~v~~~l~~~~~~~~iiasnTS~l~i~~la~~~~~-----p~r~ig~Hf~~P~~~~~lVEvv~~~~T~~~ 133 (160)
|+..=+.+.|+++++..-+.+.....+...+++.+..+-....++ .+-++- -||+..+ .|.++
T Consensus 70 E~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv----~~P~y~~--------~s~~~ 137 (315)
T 3na8_A 70 EGAYLSDPEWDEVVDFTLKTVAHRVPTIVSVSDLTTAKTVRRAQFAESLGAEAVMV----LPISYWK--------LNEAE 137 (315)
T ss_dssp TGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEE----CCCCSSC--------CCHHH
T ss_pred ChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEE----CCCCCCC--------CCHHH
Confidence 333446788999999988887776655556776676644332221 222222 2333332 36788
Q ss_pred HHHHHHHHHHHcCCeEEEecCcCc
Q psy3942 134 TYNAVTEWGKSIGKTTIVCKDTPG 157 (160)
Q Consensus 134 ~~~~~~~~~~~lgk~pv~v~d~pG 157 (160)
.++.-.++++..+ .||++.+.|+
T Consensus 138 l~~~f~~va~a~~-lPiilYn~P~ 160 (315)
T 3na8_A 138 VFQHYRAVGEAIG-VPVMLYNNPG 160 (315)
T ss_dssp HHHHHHHHHHHCS-SCEEEEECHH
T ss_pred HHHHHHHHHHhCC-CcEEEEeCcc
Confidence 8888888888887 5999988776
No 182
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=27.82 E-value=27 Score=23.83 Aligned_cols=22 Identities=14% Similarity=0.297 Sum_probs=15.8
Q ss_pred ecCChhhhcCCCcEEEEeccCC
Q psy3942 43 GSSKVEDSVSQSDLVIEAIVEN 64 (160)
Q Consensus 43 ~~~~~~~al~~adlViEav~E~ 64 (160)
..+++.+++.++|+||.|++-.
T Consensus 70 ~~~~~~~~~~~~Divi~at~~~ 91 (144)
T 3oj0_A 70 LINDIDSLIKNNDVIITATSSK 91 (144)
T ss_dssp ECSCHHHHHHTCSEEEECSCCS
T ss_pred eecCHHHHhcCCCEEEEeCCCC
Confidence 4556666778889998887643
No 183
>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*
Probab=27.67 E-value=1.1e+02 Score=25.23 Aligned_cols=88 Identities=10% Similarity=-0.077 Sum_probs=47.7
Q ss_pred ceecCChhhhcCCCcEEEEecc--C------------ChHHHHHHHHHHhhhCCCCcEEeecCCCCCHHHHh---cc-c-
Q psy3942 41 IKGSSKVEDSVSQSDLVIEAIV--E------------NMDIKHKLFTSVDKIAPASAILASNTSSLSITEIA---SV-T- 101 (160)
Q Consensus 41 i~~~~~~~~al~~adlViEav~--E------------~l~~K~~v~~~l~~~~~~~~iiasnTS~l~i~~la---~~-~- 101 (160)
++.+++..++++|||+||=+.. - |..+=+++...+.+.+.|++++..-| -|+.-++ .. .
T Consensus 96 v~i~~~~y~~~~daDvVVitag~prkpG~tR~DLl~~N~~I~k~i~~~i~~~a~p~~ivlVvs--NPvD~~t~ia~k~sg 173 (375)
T 7mdh_A 96 VSIGIDPYEVFEDVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVG--NPCNTNALICLKNAP 173 (375)
T ss_dssp EEEESCHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS--SSHHHHHHHHHHTCT
T ss_pred cEEecCCHHHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEec--CchhHHHHHHHHHcC
Confidence 4444443368999999986542 1 12233455556777766788665433 2333332 21 1
Q ss_pred CCCCcEEEeecCCCCCCCceEEEecCCCCCHHHHHHHHHHHHHcCCe
Q psy3942 102 NRKDKFVGLHFFNPVPMMKLLEVIRTNDTSDATYNAVTEWGKSIGKT 148 (160)
Q Consensus 102 ~~p~r~ig~Hf~~P~~~~~lVEvv~~~~T~~~~~~~~~~~~~~lgk~ 148 (160)
..|.|++|. .|.-++...-..+++.+|..
T Consensus 174 ~~~~rvig~------------------gT~LDsaR~r~~lA~~lgv~ 202 (375)
T 7mdh_A 174 DIPAKNFHA------------------LTRLDENRAKCQLALKAGVF 202 (375)
T ss_dssp TSCGGGEEE------------------CCHHHHHHHHHHHHHHTTSC
T ss_pred CCCccEEEe------------------eehHHHHHHHHHHHHHhCcC
Confidence 223444543 56666655444556778864
No 184
>1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A*
Probab=27.54 E-value=2e+02 Score=21.83 Aligned_cols=85 Identities=8% Similarity=0.095 Sum_probs=45.6
Q ss_pred EEEEeccCCh-----------HHHHHHHHHHhhhCCCCcEEeecC-CCCCHH--------HHhcccCCCCcEEEeecCCC
Q psy3942 56 LVIEAIVENM-----------DIKHKLFTSVDKIAPASAILASNT-SSLSIT--------EIASVTNRKDKFVGLHFFNP 115 (160)
Q Consensus 56 lViEav~E~l-----------~~K~~v~~~l~~~~~~~~iiasnT-S~l~i~--------~la~~~~~p~r~ig~Hf~~P 115 (160)
+.+|-..|.. +.=++++..+.+.-+...|+.... -+-..+ .+...-..+.-++.+|+|.|
T Consensus 121 v~~el~NEP~~~~~~~~~~w~~~~~~~~~~IR~~dp~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~s~H~Y~~ 200 (302)
T 1bqc_A 121 VLINIGNEPYGNDSATVAAWATDTSAAIQRLRAAGFEHTLVVDAPNWGQDWTNTMRNNADQVYASDPTGNTVFSIHMYGV 200 (302)
T ss_dssp EEEECSSSCCCSCHHHHTTHHHHHHHHHHHHHHTTCCSCEEEECTTTTTCTTCHHHHHHHHHHHTCTTCCEEEEEEESGG
T ss_pred EEEEeCCCCCCCCCcchhhHHHHHHHHHHHHHhcCCCcEEEECCCccccCchhhhhccchhccccCCCCCEEEEEEEccC
Confidence 6777777752 234577777777766665655421 111111 22211122445889999987
Q ss_pred CCCCceEEEecCCCCCHHHHHHHHHHHHHcCCeEEEecC
Q psy3942 116 VPMMKLLEVIRTNDTSDATYNAVTEWGKSIGKTTIVCKD 154 (160)
Q Consensus 116 ~~~~~lVEvv~~~~T~~~~~~~~~~~~~~lgk~pv~v~d 154 (160)
.. .++.++.....++..|+ |+++.|
T Consensus 201 ~~-------------~~~~~~~~~~~~~~~~~-Pv~igE 225 (302)
T 1bqc_A 201 YS-------------QASTITSYLEHFVNAGL-PLIIGE 225 (302)
T ss_dssp GC-------------SHHHHHHHHHHHHHHTC-CEEEEE
T ss_pred CC-------------CHHHHHHHHHHHHHCCC-CEEEEe
Confidence 32 12344444444555665 777644
No 185
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=27.20 E-value=97 Score=25.09 Aligned_cols=47 Identities=11% Similarity=0.200 Sum_probs=39.7
Q ss_pred CceecCChhhhcCCCcEEEEeccCChHHHHHHHHHHhhhCCCCcEEe
Q psy3942 40 RIKGSSKVEDSVSQSDLVIEAIVENMDIKHKLFTSVDKIAPASAILA 86 (160)
Q Consensus 40 ~i~~~~~~~~al~~adlViEav~E~l~~K~~v~~~l~~~~~~~~iia 86 (160)
.+++.+++++...++|+|+=-+|..+..-...+.+|-..+++++.|.
T Consensus 87 ~~~~~~~~~~~~~~~~~v~~~lpk~~~~l~~~L~~l~~~l~~~~~i~ 133 (375)
T 4dcm_A 87 SVKFLDSTADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRII 133 (375)
T ss_dssp GSEEEETTSCCCSSCSEEEEECCSCHHHHHHHHHHHHTTCCTTSEEE
T ss_pred ceEecccccccccCCCEEEEEcCCCHHHHHHHHHHHHhhCCCCCEEE
Confidence 46667777666789999999999999999999999999998887443
No 186
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=27.19 E-value=11 Score=30.21 Aligned_cols=58 Identities=10% Similarity=0.135 Sum_probs=36.2
Q ss_pred CChhhhcCCCcEEEEeccCChHHHHHHHHHHhhhCCCCcEEeecCCCC--CHHHHhcccC
Q psy3942 45 SKVEDSVSQSDLVIEAIVENMDIKHKLFTSVDKIAPASAILASNTSSL--SITEIASVTN 102 (160)
Q Consensus 45 ~~~~~al~~adlViEav~E~l~~K~~v~~~l~~~~~~~~iiasnTS~l--~i~~la~~~~ 102 (160)
.++++.++++|+|+-++|-+-+.+.-+-++.-+.++++++|...+++- .-..|...+.
T Consensus 188 ~~l~ell~~aDvVvl~~P~~~~t~~li~~~~l~~mk~ga~lIn~arg~~vd~~aL~~aL~ 247 (313)
T 2ekl_A 188 VSLEELLKNSDVISLHVTVSKDAKPIIDYPQFELMKDNVIIVNTSRAVAVNGKALLDYIK 247 (313)
T ss_dssp CCHHHHHHHCSEEEECCCCCTTSCCSBCHHHHHHSCTTEEEEESSCGGGBCHHHHHHHHH
T ss_pred cCHHHHHhhCCEEEEeccCChHHHHhhCHHHHhcCCCCCEEEECCCCcccCHHHHHHHHH
Confidence 367677899999999999665543212123334567888777555543 3336666653
No 187
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=27.06 E-value=84 Score=24.70 Aligned_cols=83 Identities=11% Similarity=0.120 Sum_probs=52.4
Q ss_pred cCChHHHHHHHHHHhhhCCCCcEEeecCCCCCHHHHhcccCC-----CCcEEEeecCCCCCCCceEEEecCCCCCHHHHH
Q psy3942 62 VENMDIKHKLFTSVDKIAPASAILASNTSSLSITEIASVTNR-----KDKFVGLHFFNPVPMMKLLEVIRTNDTSDATYN 136 (160)
Q Consensus 62 ~E~l~~K~~v~~~l~~~~~~~~iiasnTS~l~i~~la~~~~~-----p~r~ig~Hf~~P~~~~~lVEvv~~~~T~~~~~~ 136 (160)
.=+.+.|+++++..-+.+.....+...+++.+..+-....++ .+-++.+ ||+..+ .|.++.++
T Consensus 49 ~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~----~P~y~~--------~s~~~l~~ 116 (297)
T 2rfg_A 49 TLTEEEHKRVVALVAEQAQGRVPVIAGAGSNNPVEAVRYAQHAQQAGADAVLCV----AGYYNR--------PSQEGLYQ 116 (297)
T ss_dssp GSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHHTCSEEEEC----CCTTTC--------CCHHHHHH
T ss_pred hCCHHHHHHHHHHHHHHhCCCCeEEEccCCCCHHHHHHHHHHHHhcCCCEEEEc----CCCCCC--------CCHHHHHH
Confidence 335667889998888777766656566666666543332221 2223322 334333 26788888
Q ss_pred HHHHHHHHcCCeEEEecCcCc
Q psy3942 137 AVTEWGKSIGKTTIVCKDTPG 157 (160)
Q Consensus 137 ~~~~~~~~lgk~pv~v~d~pG 157 (160)
.-.++++..+ .||++.+.|+
T Consensus 117 ~f~~va~a~~-lPiilYn~P~ 136 (297)
T 2rfg_A 117 HFKMVHDAID-IPIIVYNIPP 136 (297)
T ss_dssp HHHHHHHHCS-SCEEEEECHH
T ss_pred HHHHHHHhcC-CCEEEEeCcc
Confidence 8888888886 5999887775
No 188
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=26.95 E-value=23 Score=28.95 Aligned_cols=63 Identities=8% Similarity=0.055 Sum_probs=42.7
Q ss_pred cCceecCChhhhcCCCcEEEEeccCChHHHHHHHHHHhhhCCCCcEEeecCC--CCCHHHHhccc
Q psy3942 39 SRIKGSSKVEDSVSQSDLVIEAIVENMDIKHKLFTSVDKIAPASAILASNTS--SLSITEIASVT 101 (160)
Q Consensus 39 ~~i~~~~~~~~al~~adlViEav~E~l~~K~~v~~~l~~~~~~~~iiasnTS--~l~i~~la~~~ 101 (160)
..+++.+++++.++++|+|+=++|-+-+.+.-+-++.=+.++++++|...+. -+.-..|...+
T Consensus 201 ~g~~~~~~l~ell~~aDiV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL 265 (352)
T 3gg9_A 201 DGFAVAESKDALFEQSDVLSVHLRLNDETRSIITVADLTRMKPTALFVNTSRAELVEENGMVTAL 265 (352)
T ss_dssp TTCEECSSHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCTTHHHHHH
T ss_pred cCceEeCCHHHHHhhCCEEEEeccCcHHHHHhhCHHHHhhCCCCcEEEECCCchhhcHHHHHHHH
Confidence 3456777888889999999999997776665555555566788888753332 23334555554
No 189
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=26.80 E-value=1.7e+02 Score=22.83 Aligned_cols=81 Identities=11% Similarity=0.152 Sum_probs=52.2
Q ss_pred ChHHHHHHHHHHhhhCCC-CcEEeecCCCCCHHHHhcccCC-----CCcEEEeecCCCCCCCceEEEecCCCCCHHHHHH
Q psy3942 64 NMDIKHKLFTSVDKIAPA-SAILASNTSSLSITEIASVTNR-----KDKFVGLHFFNPVPMMKLLEVIRTNDTSDATYNA 137 (160)
Q Consensus 64 ~l~~K~~v~~~l~~~~~~-~~iiasnTS~l~i~~la~~~~~-----p~r~ig~Hf~~P~~~~~lVEvv~~~~T~~~~~~~ 137 (160)
+.+.|+++++..-+.+.. ...+...+++.+..+-....++ .+-++-+ ||+..+ .|.++.++.
T Consensus 58 s~~Er~~v~~~~~~~~~g~rvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~----~P~y~~--------~s~~~l~~~ 125 (301)
T 3m5v_A 58 THEEHRTCIEIAVETCKGTKVKVLAGAGSNATHEAVGLAKFAKEHGADGILSV----APYYNK--------PTQQGLYEH 125 (301)
T ss_dssp CHHHHHHHHHHHHHHHTTSSCEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEE----CCCSSC--------CCHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEc----CCCCCC--------CCHHHHHHH
Confidence 467788999988888777 6666667777776644433221 2333332 233322 256788888
Q ss_pred HHHHHHHcCCeEEEecCcCc
Q psy3942 138 VTEWGKSIGKTTIVCKDTPG 157 (160)
Q Consensus 138 ~~~~~~~lgk~pv~v~d~pG 157 (160)
-.++++..+ .||++.+.|+
T Consensus 126 f~~va~a~~-lPiilYn~P~ 144 (301)
T 3m5v_A 126 YKAIAQSVD-IPVLLYNVPG 144 (301)
T ss_dssp HHHHHHHCS-SCEEEEECHH
T ss_pred HHHHHHhCC-CCEEEEeCch
Confidence 888888885 5888877775
No 190
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=26.73 E-value=37 Score=26.32 Aligned_cols=98 Identities=8% Similarity=0.045 Sum_probs=59.6
Q ss_pred hhc-CCCcEEEEeccCChHHHHHHHHHHhhhCCCCcEEeecCCCCCHHHHhcccCCCCcEEEe------ecCCCCCCC-c
Q psy3942 49 DSV-SQSDLVIEAIVENMDIKHKLFTSVDKIAPASAILASNTSSLSITEIASVTNRKDKFVGL------HFFNPVPMM-K 120 (160)
Q Consensus 49 ~al-~~adlViEav~E~l~~K~~v~~~l~~~~~~~~iiasnTS~l~i~~la~~~~~p~r~ig~------Hf~~P~~~~-~ 120 (160)
+++ .++|+||=|++-. .=.++++++...++++++|.|-.-++...+. +. ++++++. ....|-+.. .
T Consensus 57 ~~~~~~~D~vilavk~~--~~~~~l~~l~~~l~~~~~iv~~~nGi~~~~~---~~-~~~v~~g~~~~~a~~~~pg~v~~~ 130 (294)
T 3g17_A 57 EDVTNTFDVIIIAVKTH--QLDAVIPHLTYLAHEDTLIILAQNGYGQLEH---IP-FKNVCQAVVYISGQKKGDVVTHFR 130 (294)
T ss_dssp GGCCSCEEEEEECSCGG--GHHHHGGGHHHHEEEEEEEEECCSSCCCGGG---CC-CSCEEECEEEEEEEEETTEEEEEE
T ss_pred HhcCCCCCEEEEeCCcc--CHHHHHHHHHHhhCCCCEEEEeccCcccHhh---CC-CCcEEEEEEEEEEEEcCCCEEEEC
Confidence 455 8999999998765 2346888888889999999888888877765 22 2345432 222232110 0
Q ss_pred eEEEecCCCCCHHHHHHHHHHHHHcCCeEEEecCc
Q psy3942 121 LLEVIRTNDTSDATYNAVTEWGKSIGKTTIVCKDT 155 (160)
Q Consensus 121 lVEvv~~~~T~~~~~~~~~~~~~~lgk~pv~v~d~ 155 (160)
--.+.-+ +.+..+.+.+++...|.......|.
T Consensus 131 ~~~~~~~---~~~~~~~l~~~l~~~~~~~~~~~di 162 (294)
T 3g17_A 131 DYQLRIQ---DNALTRQFRDLVQDSQIDIVLEANI 162 (294)
T ss_dssp EEEEEEE---CSHHHHHHHHHTTTSSCEEEEESSH
T ss_pred CCEEecC---ccHHHHHHHHHHHhCCCceEEChHH
Confidence 0111111 2355666777777777766665664
No 191
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=26.55 E-value=96 Score=24.47 Aligned_cols=84 Identities=15% Similarity=0.150 Sum_probs=50.7
Q ss_pred ccCChHHHHHHHHHHhhhCCCCcEEeecCCCCCHHHHhcccCC-----CCcEEEeecCCCCCCCceEEEecCCCCCHHHH
Q psy3942 61 IVENMDIKHKLFTSVDKIAPASAILASNTSSLSITEIASVTNR-----KDKFVGLHFFNPVPMMKLLEVIRTNDTSDATY 135 (160)
Q Consensus 61 v~E~l~~K~~v~~~l~~~~~~~~iiasnTS~l~i~~la~~~~~-----p~r~ig~Hf~~P~~~~~lVEvv~~~~T~~~~~ 135 (160)
..=+.+.|+++++..-+.+.....+...+++.+..+-....++ .+-++-+ ||+..+ .|.++.+
T Consensus 60 ~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~~st~~ai~la~~A~~~Gadavlv~----~P~y~~--------~s~~~l~ 127 (306)
T 1o5k_A 60 PTVNEDEREKLVSRTLEIVDGKIPVIVGAGTNSTEKTLKLVKQAEKLGANGVLVV----TPYYNK--------PTQEGLY 127 (306)
T ss_dssp GGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEE----CCCSSC--------CCHHHHH
T ss_pred hhCCHHHHHHHHHHHHHHhCCCCeEEEcCCCccHHHHHHHHHHHHhcCCCEEEEC----CCCCCC--------CCHHHHH
Confidence 3345677889998888877777766666666666543332221 2223322 333322 2567777
Q ss_pred HHHHHHHHHcCCeEEEecCcCc
Q psy3942 136 NAVTEWGKSIGKTTIVCKDTPG 157 (160)
Q Consensus 136 ~~~~~~~~~lgk~pv~v~d~pG 157 (160)
+.-.++++..+ .||++.+.|+
T Consensus 128 ~~f~~va~a~~-lPiilYn~P~ 148 (306)
T 1o5k_A 128 QHYKYISERTD-LGIVVYNVPG 148 (306)
T ss_dssp HHHHHHHTTCS-SCEEEEECHH
T ss_pred HHHHHHHHhCC-CCEEEEeCcc
Confidence 77777777665 5888877775
No 192
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=26.54 E-value=19 Score=30.04 Aligned_cols=62 Identities=16% Similarity=0.175 Sum_probs=41.7
Q ss_pred ceecCChhhhcCCCcEEEEeccCChHHHHHHHHHHhhhCCCCcEEeecCCCC--CHHHHhcccC
Q psy3942 41 IKGSSKVEDSVSQSDLVIEAIVENMDIKHKLFTSVDKIAPASAILASNTSSL--SITEIASVTN 102 (160)
Q Consensus 41 i~~~~~~~~al~~adlViEav~E~l~~K~~v~~~l~~~~~~~~iiasnTS~l--~i~~la~~~~ 102 (160)
+....++++.+++||+|+-++|-.-+.+.-+-++.=+.++++++|.-.+.+- .-.+|...+.
T Consensus 185 ~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~ga~lIN~aRg~~vd~~aL~~aL~ 248 (404)
T 1sc6_A 185 ATQVQHLSDLLNMSDVVSLHVPENPSTKNMMGAKEISLMKPGSLLINASRGTVVDIPALADALA 248 (404)
T ss_dssp CEECSCHHHHHHHCSEEEECCCSSTTTTTCBCHHHHHHSCTTEEEEECSCSSSBCHHHHHHHHH
T ss_pred ceecCCHHHHHhcCCEEEEccCCChHHHHHhhHHHHhhcCCCeEEEECCCChHHhHHHHHHHHH
Confidence 4555678778899999999999987776544344445678888776333332 2336666654
No 193
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=26.28 E-value=1.4e+02 Score=23.29 Aligned_cols=81 Identities=15% Similarity=0.222 Sum_probs=52.5
Q ss_pred ChHHHHHHHHHHhhhCCCCcEEeecCCCCCHHHHhcccCC-----CCcEEEeecCCCCCCCceEEEecCCCCCHHHHHHH
Q psy3942 64 NMDIKHKLFTSVDKIAPASAILASNTSSLSITEIASVTNR-----KDKFVGLHFFNPVPMMKLLEVIRTNDTSDATYNAV 138 (160)
Q Consensus 64 ~l~~K~~v~~~l~~~~~~~~iiasnTS~l~i~~la~~~~~-----p~r~ig~Hf~~P~~~~~lVEvv~~~~T~~~~~~~~ 138 (160)
+.+.|+++++..-+.+.....+...+++.+..+-....++ .+-++-+ ||+..+ .+.++.++.-
T Consensus 52 s~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~----~P~y~~--------~~~~~l~~~f 119 (291)
T 3tak_A 52 SMEEHTQVIKEIIRVANKRIPIIAGTGANSTREAIELTKAAKDLGADAALLV----TPYYNK--------PTQEGLYQHY 119 (291)
T ss_dssp CHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEEE----CCCSSC--------CCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHhcCCCEEEEc----CCCCCC--------CCHHHHHHHH
Confidence 5678999999888887777666667777776654433221 2233332 233322 2567888888
Q ss_pred HHHHHHcCCeEEEecCcCc
Q psy3942 139 TEWGKSIGKTTIVCKDTPG 157 (160)
Q Consensus 139 ~~~~~~lgk~pv~v~d~pG 157 (160)
.++++..+ .||++.+.|+
T Consensus 120 ~~ia~a~~-lPiilYn~P~ 137 (291)
T 3tak_A 120 KAIAEAVE-LPLILYNVPG 137 (291)
T ss_dssp HHHHHHCC-SCEEEEECHH
T ss_pred HHHHHhcC-CCEEEEeccc
Confidence 88888885 5898877775
No 194
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=26.12 E-value=1.6e+02 Score=23.37 Aligned_cols=81 Identities=14% Similarity=0.182 Sum_probs=52.8
Q ss_pred ChHHHHHHHHHHhhhCCCCcEEeecCCCCCHHHHhcccC-----CCCcEEEeecCCCCCCCceEEEecCCCCCHHHHHHH
Q psy3942 64 NMDIKHKLFTSVDKIAPASAILASNTSSLSITEIASVTN-----RKDKFVGLHFFNPVPMMKLLEVIRTNDTSDATYNAV 138 (160)
Q Consensus 64 ~l~~K~~v~~~l~~~~~~~~iiasnTS~l~i~~la~~~~-----~p~r~ig~Hf~~P~~~~~lVEvv~~~~T~~~~~~~~ 138 (160)
+.+.|+++++..-+.+.....+...+++.+..+-....+ -.+-++-+ ||+..+ .|.++.++.-
T Consensus 74 s~~Er~~v~~~~v~~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~----~P~y~~--------~s~~~l~~~f 141 (314)
T 3qze_A 74 DVEEHIQVIRRVVDQVKGRIPVIAGTGANSTREAVALTEAAKSGGADACLLV----TPYYNK--------PTQEGMYQHF 141 (314)
T ss_dssp CHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEE----CCCSSC--------CCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEEc----CCCCCC--------CCHHHHHHHH
Confidence 677899999988887777766666777777665433222 12333333 223322 2667888888
Q ss_pred HHHHHHcCCeEEEecCcCc
Q psy3942 139 TEWGKSIGKTTIVCKDTPG 157 (160)
Q Consensus 139 ~~~~~~lgk~pv~v~d~pG 157 (160)
.++++..+ .||++.+.|+
T Consensus 142 ~~va~a~~-lPiilYn~P~ 159 (314)
T 3qze_A 142 RHIAEAVA-IPQILYNVPG 159 (314)
T ss_dssp HHHHHHSC-SCEEEEECHH
T ss_pred HHHHHhcC-CCEEEEeCcc
Confidence 88888885 5999887775
No 195
>3dcm_X AdoMet, uncharacterized protein TM_1570; trefoil knot, spout mtase, adoMet binding, transferase; HET: SAM; 2.00A {Thermotoga maritima}
Probab=26.03 E-value=2.1e+02 Score=21.37 Aligned_cols=66 Identities=14% Similarity=0.079 Sum_probs=42.9
Q ss_pred HHHHhcCceecCChhhhcCCCc-------EEEEeccC----ChHHHHHHHHHHhhhCCCCcEEeecCCCCCHHHHhcc
Q psy3942 34 IDLTLSRIKGSSKVEDSVSQSD-------LVIEAIVE----NMDIKHKLFTSVDKIAPASAILASNTSSLSITEIASV 100 (160)
Q Consensus 34 ~~~~l~~i~~~~~~~~al~~ad-------lViEav~E----~l~~K~~v~~~l~~~~~~~~iiasnTS~l~i~~la~~ 100 (160)
+.+++++.++..++++|+++++ +|+=+-.- .+.-+ ++-+.+.....|=+++.-...+|+-.+|..+
T Consensus 78 r~d~L~~a~vv~sL~eAl~~~~~~~g~~p~vvaTsAr~~~~~i~~~-el~~~i~~~~~pvalvFG~~~GLtneel~~c 154 (192)
T 3dcm_X 78 RAESLKLVKLKSYLEDVLEDIESVEGERPLIFFTSAKKRENDISFE-EGRRIIIETEKPVLILLGTGWGLPDEILEIS 154 (192)
T ss_dssp SHHHHTTEEEESSHHHHHHHHHHHHSSCCEEEECCSSCCSSCBCHH-HHHHHHHHCCSCEEEEECCTTCCCHHHHTTC
T ss_pred HHHHhccCeEECCHHHHHHHHHhhcCCccEEEEeCCCcCCCCCCHH-HHHHHHHhCCCCEEEEECCCCCCCHHHHHhc
Confidence 4678999999999999999999 88866532 12111 2222333333454555444688888888754
No 196
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=25.38 E-value=71 Score=25.48 Aligned_cols=84 Identities=13% Similarity=0.115 Sum_probs=52.3
Q ss_pred CChHHHHHHHHHHhhhCCCCcEEeecCCCCCHHHHhcccCC-----CCcEEEeecCCCCCCCceEEEecCCCCCHHHHHH
Q psy3942 63 ENMDIKHKLFTSVDKIAPASAILASNTSSLSITEIASVTNR-----KDKFVGLHFFNPVPMMKLLEVIRTNDTSDATYNA 137 (160)
Q Consensus 63 E~l~~K~~v~~~l~~~~~~~~iiasnTS~l~i~~la~~~~~-----p~r~ig~Hf~~P~~~~~lVEvv~~~~T~~~~~~~ 137 (160)
=+.+.|+++++..-+.+.....+...+++.+..+-....++ .+-++-+ .|.|..+ +.+.++.++.
T Consensus 61 Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~---~P~y~~k-------p~~~~~l~~~ 130 (318)
T 3qfe_A 61 LTREERAQLIATARKAVGPDFPIMAGVGAHSTRQVLEHINDASVAGANYVLVL---PPAYFGK-------ATTPPVIKSF 130 (318)
T ss_dssp SCHHHHHHHHHHHHHHHCTTSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEEC---CCCC----------CCCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEe---CCcccCC-------CCCHHHHHHH
Confidence 35678899999888887766655556777776644433322 2223322 2222211 2366778888
Q ss_pred HHHHHHHcCCeEEEecCcCc
Q psy3942 138 VTEWGKSIGKTTIVCKDTPG 157 (160)
Q Consensus 138 ~~~~~~~lgk~pv~v~d~pG 157 (160)
-.++++..+ .||++.+.||
T Consensus 131 f~~ia~a~~-lPiilYn~P~ 149 (318)
T 3qfe_A 131 FDDVSCQSP-LPVVIYNFPG 149 (318)
T ss_dssp HHHHHHHCS-SCEEEEECCC
T ss_pred HHHHHhhCC-CCEEEEeCCc
Confidence 888888886 5999888886
No 197
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=25.28 E-value=28 Score=28.93 Aligned_cols=62 Identities=13% Similarity=0.084 Sum_probs=39.5
Q ss_pred ceecCChhhhcCCCcEEEEeccCChHHHHHHHHHHhhhCCCCcEEeecCCCCCH--HHHhcccC
Q psy3942 41 IKGSSKVEDSVSQSDLVIEAIVENMDIKHKLFTSVDKIAPASAILASNTSSLSI--TEIASVTN 102 (160)
Q Consensus 41 i~~~~~~~~al~~adlViEav~E~l~~K~~v~~~l~~~~~~~~iiasnTS~l~i--~~la~~~~ 102 (160)
+....++++.++++|+|+-++|-+-+.+.-+-++.=+.++++++|...+.+-.+ .+|...+.
T Consensus 235 ~~~~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~ 298 (393)
T 2nac_A 235 LTWHATREDMYPVCDVVTLNCPLHPETEHMINDETLKLFKRGAYIVNTARGKLCDRDAVARALE 298 (393)
T ss_dssp CEECSSHHHHGGGCSEEEECSCCCTTTTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred ceecCCHHHHHhcCCEEEEecCCchHHHHHhhHHHHhhCCCCCEEEECCCchHhhHHHHHHHHH
Confidence 444567877889999999999966554332223444567888877655444323 35776664
No 198
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=25.01 E-value=1.2e+02 Score=24.36 Aligned_cols=86 Identities=9% Similarity=0.012 Sum_probs=55.1
Q ss_pred EeccCChHHHHHHHHHHhhhCCCCcEEeecCCCCCHHHHhcccC-----CCCcEEEeecCCCCCCCceEEEecCCCCCHH
Q psy3942 59 EAIVENMDIKHKLFTSVDKIAPASAILASNTSSLSITEIASVTN-----RKDKFVGLHFFNPVPMMKLLEVIRTNDTSDA 133 (160)
Q Consensus 59 Eav~E~l~~K~~v~~~l~~~~~~~~iiasnTS~l~i~~la~~~~-----~p~r~ig~Hf~~P~~~~~lVEvv~~~~T~~~ 133 (160)
|+..=+.+.|+++++..-+.+.....+...+++.+..+-....+ ..+-++.+ ||+..+ .|.++
T Consensus 77 E~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~----~P~Y~~--------~s~~~ 144 (343)
T 2v9d_A 77 EFSQLGAEERKAIARFAIDHVDRRVPVLIGTGGTNARETIELSQHAQQAGADGIVVI----NPYYWK--------VSEAN 144 (343)
T ss_dssp TGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCSSCHHHHHHHHHHHHHHTCSEEEEE----CCSSSC--------CCHHH
T ss_pred ChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEEC----CCCCCC--------CCHHH
Confidence 44555677899999998888877776666666666654433222 12333333 333322 26777
Q ss_pred HHHHHHHHHHHcCCeEEEecCcCc
Q psy3942 134 TYNAVTEWGKSIGKTTIVCKDTPG 157 (160)
Q Consensus 134 ~~~~~~~~~~~lgk~pv~v~d~pG 157 (160)
.++.-.++++..+ .||++.+.|+
T Consensus 145 l~~~f~~VA~a~~-lPiilYn~P~ 167 (343)
T 2v9d_A 145 LIRYFEQVADSVT-LPVMLYNFPA 167 (343)
T ss_dssp HHHHHHHHHHTCS-SCEEEEECHH
T ss_pred HHHHHHHHHHhcC-CCEEEEeCch
Confidence 8888888888775 5898877775
No 199
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=24.71 E-value=1.4e+02 Score=23.21 Aligned_cols=81 Identities=10% Similarity=0.107 Sum_probs=51.8
Q ss_pred ChHHHHHHHHHHhhhCCCCcEEeecCCCCCHHHHhcccCC-----CCcEEEeecCCCCCCCceEEEecCCCCCHHHHHHH
Q psy3942 64 NMDIKHKLFTSVDKIAPASAILASNTSSLSITEIASVTNR-----KDKFVGLHFFNPVPMMKLLEVIRTNDTSDATYNAV 138 (160)
Q Consensus 64 ~l~~K~~v~~~l~~~~~~~~iiasnTS~l~i~~la~~~~~-----p~r~ig~Hf~~P~~~~~lVEvv~~~~T~~~~~~~~ 138 (160)
..+.|+++++..-+.+.....+...+++.+..+-....++ .+-++-+ ||+..+ .|.++.++.-
T Consensus 53 t~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~----~P~y~~--------~~~~~l~~~f 120 (292)
T 3daq_A 53 TTDEKELILKTVIDLVDKRVPVIAGTGTNDTEKSIQASIQAKALGADAIMLI----TPYYNK--------TNQRGLVKHF 120 (292)
T ss_dssp CHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEE----CCCSSC--------CCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHHcCCCEEEEC----CCCCCC--------CCHHHHHHHH
Confidence 4677889998888877776666656777777654433222 2333332 233322 2567788888
Q ss_pred HHHHHHcCCeEEEecCcCc
Q psy3942 139 TEWGKSIGKTTIVCKDTPG 157 (160)
Q Consensus 139 ~~~~~~lgk~pv~v~d~pG 157 (160)
.++++..+ .||++.+.|+
T Consensus 121 ~~ia~a~~-lPiilYn~P~ 138 (292)
T 3daq_A 121 EAIADAVK-LPVVLYNVPS 138 (292)
T ss_dssp HHHHHHHC-SCEEEEECHH
T ss_pred HHHHHhCC-CCEEEEeccc
Confidence 88888885 5888887775
No 200
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=24.19 E-value=50 Score=26.29 Aligned_cols=81 Identities=14% Similarity=0.198 Sum_probs=53.0
Q ss_pred ChHHHHHHHHHHhhhCCCCcEEeecCCCCCHHHHhcccCC-----C-CcEEEeecCCCCCCCceEEEecCCCCCHHHHHH
Q psy3942 64 NMDIKHKLFTSVDKIAPASAILASNTSSLSITEIASVTNR-----K-DKFVGLHFFNPVPMMKLLEVIRTNDTSDATYNA 137 (160)
Q Consensus 64 ~l~~K~~v~~~l~~~~~~~~iiasnTS~l~i~~la~~~~~-----p-~r~ig~Hf~~P~~~~~lVEvv~~~~T~~~~~~~ 137 (160)
+.+.|+++++..-+.+.....+...+++.+..+-....++ . +-++-+ ||+..+ .+.++.++.
T Consensus 58 s~~Er~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Ga~davlv~----~P~y~~--------~s~~~l~~~ 125 (311)
T 3h5d_A 58 THDEELELFAAVQKVVNGRVPLIAGVGTNDTRDSIEFVKEVAEFGGFAAGLAI----VPYYNK--------PSQEGMYQH 125 (311)
T ss_dssp CHHHHHHHHHHHHHHSCSSSCEEEECCCSSHHHHHHHHHHHHHSCCCSEEEEE----CCCSSC--------CCHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHhcCCCcEEEEc----CCCCCC--------CCHHHHHHH
Confidence 5678999999998888877766667777777654433222 1 333332 223322 256778888
Q ss_pred HHHHHHHcCCeEEEecCcCc
Q psy3942 138 VTEWGKSIGKTTIVCKDTPG 157 (160)
Q Consensus 138 ~~~~~~~lgk~pv~v~d~pG 157 (160)
-.++++..+ .||++.+.||
T Consensus 126 f~~va~a~~-lPiilYn~P~ 144 (311)
T 3h5d_A 126 FKAIADASD-LPIIIYNIPG 144 (311)
T ss_dssp HHHHHHSCS-SCEEEEECHH
T ss_pred HHHHHHhCC-CCEEEEeccc
Confidence 888888774 5999988775
No 201
>3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A*
Probab=23.63 E-value=80 Score=27.25 Aligned_cols=54 Identities=22% Similarity=0.302 Sum_probs=40.9
Q ss_pred HhcCceecCChhhhcCCCcEEEEeccCChHHHHHHHHHHhhhCCCCcEEeecCCCCCH
Q psy3942 37 TLSRIKGSSKVEDSVSQSDLVIEAIVENMDIKHKLFTSVDKIAPASAILASNTSSLSI 94 (160)
Q Consensus 37 ~l~~i~~~~~~~~al~~adlViEav~E~l~~K~~v~~~l~~~~~~~~iiasnTS~l~i 94 (160)
.-+.+++. +++++++.||+|+=-+|.. .-.++|+++...+.++..|+= +.++.|
T Consensus 83 ~~~Gf~v~-~~~eA~~~ADvV~~L~PD~--~q~~vy~~I~p~lk~G~~L~f-aHGFnI 136 (491)
T 3ulk_A 83 TENGFKVG-TYEELIPQADLVINLTPDK--QHSDVVRTVQPLMKDGAALGY-SHGFNI 136 (491)
T ss_dssp HHTTCEEE-EHHHHGGGCSEEEECSCGG--GHHHHHHHHGGGSCTTCEEEE-SSCHHH
T ss_pred HHCCCEec-CHHHHHHhCCEEEEeCChh--hHHHHHHHHHhhCCCCCEEEe-cCcccc
Confidence 34556655 4568999999999999985 667789999999999887773 344433
No 202
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=23.40 E-value=1.5e+02 Score=23.46 Aligned_cols=81 Identities=11% Similarity=0.162 Sum_probs=51.6
Q ss_pred ChHHHHHHHHHHhhhCCCCcEEeecCCCCCHHHHhcccC-----CCCcEEEeecCCCCCCCceEEEecCCCCCHHHHHHH
Q psy3942 64 NMDIKHKLFTSVDKIAPASAILASNTSSLSITEIASVTN-----RKDKFVGLHFFNPVPMMKLLEVIRTNDTSDATYNAV 138 (160)
Q Consensus 64 ~l~~K~~v~~~l~~~~~~~~iiasnTS~l~i~~la~~~~-----~p~r~ig~Hf~~P~~~~~lVEvv~~~~T~~~~~~~~ 138 (160)
+.+.|+++++..-+.+.....+...+++.+..+-....+ -.+-++-+ ||+..+ .|.++.++.-
T Consensus 73 s~~Er~~v~~~~v~~~~grvpViaGvg~~st~~ai~la~~A~~~Gadavlv~----~P~y~~--------~~~~~l~~~f 140 (315)
T 3si9_A 73 THEEHKRIIELCVEQVAKRVPVVAGAGSNSTSEAVELAKHAEKAGADAVLVV----TPYYNR--------PNQRGLYTHF 140 (315)
T ss_dssp CHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEE----CCCSSC--------CCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEEC----CCCCCC--------CCHHHHHHHH
Confidence 567889999988887776665555677666664333222 12333332 233322 2567788888
Q ss_pred HHHHHHcCCeEEEecCcCc
Q psy3942 139 TEWGKSIGKTTIVCKDTPG 157 (160)
Q Consensus 139 ~~~~~~lgk~pv~v~d~pG 157 (160)
.++++..+ .||++.+.||
T Consensus 141 ~~va~a~~-lPiilYn~P~ 158 (315)
T 3si9_A 141 SSIAKAIS-IPIIIYNIPS 158 (315)
T ss_dssp HHHHHHCS-SCEEEEECHH
T ss_pred HHHHHcCC-CCEEEEeCch
Confidence 88888885 5898887776
No 203
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=22.62 E-value=23 Score=28.51 Aligned_cols=64 Identities=17% Similarity=0.206 Sum_probs=41.5
Q ss_pred ChhhhcCCCcEEEEeccCChHHHHHHHHHHhhhCCCCcEEeecCCC--CCHHHHhcccCCCCcEEEe
Q psy3942 46 KVEDSVSQSDLVIEAIVENMDIKHKLFTSVDKIAPASAILASNTSS--LSITEIASVTNRKDKFVGL 110 (160)
Q Consensus 46 ~~~~al~~adlViEav~E~l~~K~~v~~~l~~~~~~~~iiasnTS~--l~i~~la~~~~~p~r~ig~ 110 (160)
++++.++++|+|+-++|-+-+.+.-+-++.-+.++++++|.-.+++ +.-..|...+.. .++-|.
T Consensus 190 ~l~ell~~aDvV~~~~P~~~~t~~li~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~-g~i~gA 255 (333)
T 1dxy_A 190 SLEDLFKQSDVIDLHVPGIEQNTHIINEAAFNLMKPGAIVINTARPNLIDTQAMLSNLKS-GKLAGV 255 (333)
T ss_dssp CHHHHHHHCSEEEECCCCCGGGTTSBCHHHHHHSCTTEEEEECSCTTSBCHHHHHHHHHT-TSEEEE
T ss_pred CHHHHHhcCCEEEEcCCCchhHHHHhCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHh-CCccEE
Confidence 6767789999999999988776653334444567888877643333 344567766643 344443
No 204
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=22.42 E-value=23 Score=28.55 Aligned_cols=71 Identities=10% Similarity=0.179 Sum_probs=45.2
Q ss_pred cCChhhhcCCCcEEEEeccCChHHHHHHHHHHhhhCCCCcEEeecC--CCCCHHHHhcccCC-CCcEEEeecCC
Q psy3942 44 SSKVEDSVSQSDLVIEAIVENMDIKHKLFTSVDKIAPASAILASNT--SSLSITEIASVTNR-KDKFVGLHFFN 114 (160)
Q Consensus 44 ~~~~~~al~~adlViEav~E~l~~K~~v~~~l~~~~~~~~iiasnT--S~l~i~~la~~~~~-p~r~ig~Hf~~ 114 (160)
..++++.+++||+|+=++|-+-+.+.-+-++.=+.++++++|...+ +.+.-..|...+.. .-+-.++=-|.
T Consensus 182 ~~~l~ell~~aDvV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~gA~lDV~~ 255 (324)
T 3evt_A 182 FTATADALATANFIVNALPLTPTTHHLFSTELFQQTKQQPMLINIGRGPAVDTTALMTALDHHQLSMAALDVTE 255 (324)
T ss_dssp GGGCHHHHHHCSEEEECCCCCGGGTTCBSHHHHHTCCSCCEEEECSCGGGBCHHHHHHHHHTTSCSEEEESSCS
T ss_pred cCCHHHHHhhCCEEEEcCCCchHHHHhcCHHHHhcCCCCCEEEEcCCChhhhHHHHHHHHHhCCceEEEeCCCC
Confidence 4567778899999999999777766555555556678888775333 23445567666642 22334554443
No 205
>3abf_A 4-oxalocrotonate tautomerase; isomerase; 1.94A {Thermus thermophilus}
Probab=22.27 E-value=92 Score=17.78 Aligned_cols=31 Identities=19% Similarity=0.254 Sum_probs=17.1
Q ss_pred CceEEEecCCCCCHH----HHHHHHHHH-HHcCCeE
Q psy3942 119 MKLLEVIRTNDTSDA----TYNAVTEWG-KSIGKTT 149 (160)
Q Consensus 119 ~~lVEvv~~~~T~~~----~~~~~~~~~-~~lgk~p 149 (160)
||+++|-....-+++ ..+.+.+.+ +.+|+.|
T Consensus 1 MP~i~i~~~~g~s~eqk~~l~~~lt~~l~~~lg~~~ 36 (64)
T 3abf_A 1 MVVLKVTLLEGRPPEKKRELVRRLTEMASRLLGEPY 36 (64)
T ss_dssp CEEEEEEEETTCCHHHHHHHHHHHHHHHHHHTTCCG
T ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHHHHHHhCCCc
Confidence 788888743333443 344444444 4488854
No 206
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=21.80 E-value=58 Score=25.50 Aligned_cols=83 Identities=8% Similarity=0.053 Sum_probs=49.8
Q ss_pred eccCChHHHHHHHHHHhhhCCCCcEEeecCCCCCHHH---HhcccC--CCCcEEEeecCCCCCCCceEEEecCCCCCHHH
Q psy3942 60 AIVENMDIKHKLFTSVDKIAPASAILASNTSSLSITE---IASVTN--RKDKFVGLHFFNPVPMMKLLEVIRTNDTSDAT 134 (160)
Q Consensus 60 av~E~l~~K~~v~~~l~~~~~~~~iiasnTS~l~i~~---la~~~~--~p~r~ig~Hf~~P~~~~~lVEvv~~~~T~~~~ 134 (160)
+..=+.+.|+++++..-+.+.. +|+ .+++.+..+ ++.... ..+-++-+ ||+..+. .|.++.
T Consensus 46 ~~~Ls~eEr~~v~~~~~~~~~g--Via-Gvg~~~t~~ai~la~~A~~~Gadavlv~----~P~y~~~-------~s~~~l 111 (288)
T 2nuw_A 46 GPALSKDEKRQNLNALYDVTHK--LIF-QVGSLNLNDVMELVKFSNEMDILGVSSH----SPYYFPR-------LPEKFL 111 (288)
T ss_dssp GGGSCHHHHHHHHHHHTTTCSC--EEE-ECCCSCHHHHHHHHHHHHTSCCSEEEEC----CCCSSCS-------CCHHHH
T ss_pred hhhCCHHHHHHHHHHHHHHhCC--eEE-eeCCCCHHHHHHHHHHHHhcCCCEEEEc----CCcCCCC-------CCHHHH
Confidence 3344567899999999888766 443 344444443 332221 12223222 3333320 267888
Q ss_pred HHHHHHHHHHcCCeEEEecCcCc
Q psy3942 135 YNAVTEWGKSIGKTTIVCKDTPG 157 (160)
Q Consensus 135 ~~~~~~~~~~lgk~pv~v~d~pG 157 (160)
++.-.++++..+ .||++.+.|+
T Consensus 112 ~~~f~~va~a~~-lPiilYn~P~ 133 (288)
T 2nuw_A 112 AKYYEEIARISS-HSLYIYNYPA 133 (288)
T ss_dssp HHHHHHHHHHCC-SCEEEEECHH
T ss_pred HHHHHHHHHhcC-CCEEEEECch
Confidence 888888888886 5999988775
No 207
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=21.38 E-value=1.9e+02 Score=19.50 Aligned_cols=44 Identities=9% Similarity=0.131 Sum_probs=25.5
Q ss_pred cCCCcEEEEeccCChHHHHHHHHHHhhhCCCCcEEeecCCCCCHH
Q psy3942 51 VSQSDLVIEAIVENMDIKHKLFTSVDKIAPASAILASNTSSLSIT 95 (160)
Q Consensus 51 l~~adlViEav~E~l~~K~~v~~~l~~~~~~~~iiasnTS~l~i~ 95 (160)
+.++|+||.|++.+ +.-..+...+....+...+++..++.-...
T Consensus 82 ~~~ad~Vi~~~~~~-~~~~~~~~~~~~~~~~~~iv~~~~~~~~~~ 125 (155)
T 2g1u_A 82 MEKADMVFAFTNDD-STNFFISMNARYMFNVENVIARVYDPEKIK 125 (155)
T ss_dssp GGGCSEEEECSSCH-HHHHHHHHHHHHTSCCSEEEEECSSGGGHH
T ss_pred cccCCEEEEEeCCc-HHHHHHHHHHHHHCCCCeEEEEECCHHHHH
Confidence 67899999999854 344444444444445555665544443333
No 208
>2p0o_A Hypothetical protein DUF871; structural genomics, TIM barrel, PF05 2, protein structure initiative, midwest center for structu genomics; 2.15A {Enterococcus faecalis}
Probab=21.26 E-value=3.1e+02 Score=22.63 Aligned_cols=60 Identities=18% Similarity=0.359 Sum_probs=47.9
Q ss_pred cEEeecCCCCCHHHHhc---ccCCCCcEEEeecCCCCCCCceEEEecCCCCCHHHHHHHHHHHHHcCCeEEE
Q psy3942 83 AILASNTSSLSITEIAS---VTNRKDKFVGLHFFNPVPMMKLLEVIRTNDTSDATYNAVTEWGKSIGKTTIV 151 (160)
Q Consensus 83 ~iiasnTS~l~i~~la~---~~~~p~r~ig~Hf~~P~~~~~lVEvv~~~~T~~~~~~~~~~~~~~lgk~pv~ 151 (160)
--|.=|.|+++...|-. .-.+.+++.|+|=|.|-+. .+-+.+...+--+++++.|....-
T Consensus 114 lkIeLNASti~~~~l~~l~~~~~n~~~l~a~HNFYPr~~---------TGLs~~~f~~~n~~~k~~Gi~t~A 176 (372)
T 2p0o_A 114 IDIGLNASTITLEEVAELKAHQADFSRLEAWHNYYPRPE---------TGIGTTFFNEKNRWLKELGLQVFT 176 (372)
T ss_dssp SEEEEETTTCCHHHHHHHHHTTCCGGGEEEECCCCCSTT---------CSBCHHHHHHHHHHHHHTTCEEEE
T ss_pred CEEEEECccCCHHHHHHHHHcCCChHHeEEeeccCCCCC---------CCCCHHHHHHHHHHHHHCCCcEEE
Confidence 67999999998775544 4556889999999999654 455888889999999999976554
No 209
>1egz_A Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CLAN GH-A, family 5-2, cellulase; 2.30A {Erwinia chrysanthemi} SCOP: c.1.8.3
Probab=20.81 E-value=1.2e+02 Score=22.95 Aligned_cols=83 Identities=16% Similarity=0.245 Sum_probs=43.0
Q ss_pred EEEEeccCCh---------HHHHHHHHHHhhhCCCCcEEeecC-CCCCHHHHhc-ccCCCCcEEEeecCCCCCCCceEEE
Q psy3942 56 LVIEAIVENM---------DIKHKLFTSVDKIAPASAILASNT-SSLSITEIAS-VTNRKDKFVGLHFFNPVPMMKLLEV 124 (160)
Q Consensus 56 lViEav~E~l---------~~K~~v~~~l~~~~~~~~iiasnT-S~l~i~~la~-~~~~p~r~ig~Hf~~P~~~~~lVEv 124 (160)
+++|-..|.- +.=++++..+.+.-+...|+.... -+-....... -...+.-++.+|+|.|.+
T Consensus 126 V~~el~NEP~~~~~~~~~~~~~~~~~~~IR~~d~~~~i~v~~~~~~~~~~~~~~~p~~~~~~~~s~H~Y~~~~------- 198 (291)
T 1egz_A 126 VIYEIYNEPLQVSWSNTIKPYAEAVISAIRAIDPDNLIIVGTPSWSQNVDEASRDPINAKNIAYTLHFYAGTH------- 198 (291)
T ss_dssp EEEECCSCCCSCCTTTTHHHHHHHHHHHHHHHCSSSCEEECCHHHHTCHHHHHTSCCCSSSEEEEEEEETTTC-------
T ss_pred EEEEecCCCCCCchHHHHHHHHHHHHHHHHhcCCCCEEEECCCCcccccchhhcCCCCCCCEEEEEEecCCCC-------
Confidence 4577666643 234677777877766555554321 1111221111 111234689999998732
Q ss_pred ecCCCCCHHHHHHHHHHHHHcCCeEEEec
Q psy3942 125 IRTNDTSDATYNAVTEWGKSIGKTTIVCK 153 (160)
Q Consensus 125 v~~~~T~~~~~~~~~~~~~~lgk~pv~v~ 153 (160)
++.+......++..|+ |+++.
T Consensus 199 -------~~~~~~~~~~~~~~~~-Pv~ig 219 (291)
T 1egz_A 199 -------GESLRNKARQALNNGI-ALFVT 219 (291)
T ss_dssp -------CHHHHHHHHHHHHTTC-CEEEE
T ss_pred -------hHHHHHHHHHHHHCCC-cEEEe
Confidence 2334444455566666 66654
No 210
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=20.41 E-value=2.3e+02 Score=23.03 Aligned_cols=61 Identities=21% Similarity=0.340 Sum_probs=40.6
Q ss_pred CCcEEe-ecCCCCCHHHHhcccCCCCcEEEeecCCCCCCCceEEEecCCCCCHHHHHHHHHHHHHcCCeEEEe-cCcCc
Q psy3942 81 ASAILA-SNTSSLSITEIASVTNRKDKFVGLHFFNPVPMMKLLEVIRTNDTSDATYNAVTEWGKSIGKTTIVC-KDTPG 157 (160)
Q Consensus 81 ~~~iia-snTS~l~i~~la~~~~~p~r~ig~Hf~~P~~~~~lVEvv~~~~T~~~~~~~~~~~~~~lgk~pv~v-~d~pG 157 (160)
.+++.. |+.|+.+++++++... +.. .||. .|. ..+.+......+-++..|-.-+++ -|.|.
T Consensus 98 ~gi~~~lSt~ss~s~e~v~~~~~--~~~---~wfQ-lY~----------~~d~~~~~~l~~ra~~aG~~alvlTvD~p~ 160 (352)
T 3sgz_A 98 ANICYVISSYASYSLEDIVAAAP--EGF---RWFQ-LYM----------KSDWDFNKQMVQRAEALGFKALVITIDTPV 160 (352)
T ss_dssp HTCEEEECTTCSSCHHHHHHHST--TCE---EEEE-CCC----------CSCHHHHHHHHHHHHHTTCCCEEEECSCSS
T ss_pred cCCCeEeCCCCCCCHHHHHHhcc--Ccc---ceec-ccc----------CCCHHHHHHHHHHHHHcCCCEEEEEeCCCC
Confidence 345444 6668899999998753 212 2332 121 236777788888888899988887 78875
No 211
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=20.17 E-value=52 Score=26.06 Aligned_cols=81 Identities=11% Similarity=0.083 Sum_probs=53.4
Q ss_pred ChHHHHHHHHHHhhhCCCCcEEeecCCCCCHHHHhcccCC-----CCcEEEeecCCCCCCCceEEEecCCCCCHHHHHHH
Q psy3942 64 NMDIKHKLFTSVDKIAPASAILASNTSSLSITEIASVTNR-----KDKFVGLHFFNPVPMMKLLEVIRTNDTSDATYNAV 138 (160)
Q Consensus 64 ~l~~K~~v~~~l~~~~~~~~iiasnTS~l~i~~la~~~~~-----p~r~ig~Hf~~P~~~~~lVEvv~~~~T~~~~~~~~ 138 (160)
+.+.|+++++..-+.+.....+...+++.+..+-....++ .+-++-+ ||+..+ .|.++.++.-
T Consensus 66 t~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~----~P~y~~--------~s~~~l~~~f 133 (304)
T 3l21_A 66 TDGEKIELLRAVLEAVGDRARVIAGAGTYDTAHSIRLAKACAAEGAHGLLVV----TPYYSK--------PPQRGLQAHF 133 (304)
T ss_dssp CHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEEE----CCCSSC--------CCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEC----CCCCCC--------CCHHHHHHHH
Confidence 5788999999988888877766667777777654443322 2333332 233322 2567777777
Q ss_pred HHHHHHcCCeEEEecCcCc
Q psy3942 139 TEWGKSIGKTTIVCKDTPG 157 (160)
Q Consensus 139 ~~~~~~lgk~pv~v~d~pG 157 (160)
.++++..+ .||++.+.|+
T Consensus 134 ~~va~a~~-lPiilYn~P~ 151 (304)
T 3l21_A 134 TAVADATE-LPMLLYDIPG 151 (304)
T ss_dssp HHHHTSCS-SCEEEEECHH
T ss_pred HHHHHhcC-CCEEEEeCcc
Confidence 77777774 5998887775
Done!