Query psy3950
Match_columns 338
No_of_seqs 121 out of 215
Neff 5.3
Searched_HMMs 29240
Date Fri Aug 16 21:31:41 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3950.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/3950hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2p9r_A Alpha-2-M, alpha-2-macr 90.1 1.2 4E-05 34.7 7.8 70 202-276 11-86 (102)
2 3nrp_A Periplasmic protein-pro 88.8 0.95 3.2E-05 39.5 6.8 71 206-279 39-121 (160)
3 2o6f_A 34 kDa membrane antigen 88.6 1 3.5E-05 40.3 7.0 72 206-279 69-153 (189)
4 3lzq_A P19 protein; copper bin 70.5 22 0.00075 30.9 8.8 72 206-279 37-126 (159)
5 3pjl_A 34 kDa membrane antigen 70.5 20 0.00068 32.4 8.8 71 207-279 93-176 (212)
6 2ds4_A Tripartite motif protei 66.3 27 0.00091 27.0 8.0 71 203-275 23-96 (113)
7 3rgh_A Filamin-A; cell adhesio 62.7 16 0.00056 28.3 6.0 33 243-276 53-85 (100)
8 2hr0_A Complement C3 beta chai 54.5 31 0.0011 35.1 8.0 69 201-275 114-189 (645)
9 2d7m_A Filamin-C; beta-sandwic 45.9 68 0.0023 25.2 7.2 61 205-276 27-90 (115)
10 2d7n_A Filamin-C; beta-sandwic 44.4 45 0.0015 25.8 5.8 46 230-276 22-68 (93)
11 2d7p_A Filamin-C; beta-sandwic 44.2 42 0.0014 26.7 5.7 61 204-276 24-87 (112)
12 2di7_A BK158_1; beta-sandwich, 42.3 10 0.00034 31.4 1.7 31 246-276 76-106 (124)
13 2dj4_A Filamin-B; beta-sandwic 40.9 53 0.0018 25.6 5.8 42 234-276 45-89 (108)
14 2e9j_A Filamin-B; beta-sandwic 40.0 26 0.00088 27.9 3.8 61 205-276 37-100 (119)
15 4fxk_A Complement C4 beta chai 34.0 1.2E+02 0.004 30.4 8.4 69 201-276 128-202 (656)
16 2b39_A C3; thioester, immune d 33.0 74 0.0025 36.4 7.4 69 201-275 135-210 (1661)
17 2dia_A Filamin-B; beta-sandwic 31.3 1.2E+02 0.004 23.7 6.4 63 205-276 25-88 (113)
18 3cu7_A Complement C5; Mg domai 30.2 69 0.0024 36.6 6.6 68 201-275 132-206 (1676)
19 2ee9_A Filamin-B; beta-sandwic 29.6 87 0.003 24.4 5.2 46 230-276 30-76 (95)
20 2dmb_A Filamin-B; beta-sandwic 29.4 90 0.0031 25.1 5.5 30 246-276 60-89 (124)
21 2cov_D Beta-1,3-xylanase; carb 27.1 1.5E+02 0.005 23.6 6.0 61 213-274 22-86 (104)
22 2dlg_A Filamin-B; beta-sandwic 26.3 82 0.0028 24.6 4.6 68 198-276 7-77 (102)
23 2pn5_A TEP1R, thioester-contai 26.0 1.6E+02 0.0054 32.7 8.4 69 202-275 109-184 (1325)
24 3cnk_A Filamin-A; FLNA24, X-RA 25.9 1.1E+02 0.0038 22.6 5.1 32 244-276 45-76 (89)
25 1wlh_A Gelation factor; ABP-12 25.5 1.7E+02 0.0057 26.6 7.3 66 205-276 119-189 (311)
26 4b7l_A Filamin-B; structural p 24.3 1.3E+02 0.0044 28.6 6.4 62 204-276 269-335 (347)
27 1v05_A Filamin C; actin-bindin 23.7 1.6E+02 0.0056 22.0 5.8 31 245-276 53-83 (96)
28 2pma_A Uncharacterized protein 23.4 86 0.0029 26.6 4.4 17 213-229 37-53 (146)
29 2kng_A Protein LSR2; DNA-bindi 23.0 18 0.00062 26.1 0.1 20 14-33 14-33 (55)
30 2dic_A Filamin-B; beta-sandwic 22.5 1.4E+02 0.0049 22.9 5.3 26 250-276 61-86 (105)
31 4g9j_C Synthetic peptide, seri 21.8 18 0.00063 21.7 -0.1 16 129-144 8-23 (26)
32 2k9u_A Gamma filamin; cytoskel 21.3 2.2E+02 0.0076 22.3 6.4 29 247-276 65-93 (119)
33 1qfh_A Protein (gelation facto 20.0 2.7E+02 0.0094 23.7 7.2 66 205-276 20-90 (212)
No 1
>2p9r_A Alpha-2-M, alpha-2-macroglobulin; human alpha2-macroglobulin, Mg2 domain, X-RAY, signaling protein; 2.30A {Homo sapiens}
Probab=90.15 E-value=1.2 Score=34.74 Aligned_cols=70 Identities=19% Similarity=0.162 Sum_probs=50.9
Q ss_pred cceEeCCceEEEEEEEEeeCCeeeeccCCceEEEEEEeCeee----eeeecccCCceEEEEEecCCc--eeeeEEEEEee
Q psy3950 202 VAYTIMDNVVFRLELERKSGNTWVPHNANDVQMEFVRIDPFV----RTTLKSIAQGKYETVFKIPDV--YGVYQFKVIYN 275 (338)
Q Consensus 202 ~~Y~I~D~v~ysi~i~e~~~~~WvPf~~dDiQlEf~mLDPy~----R~~L~~~~~g~y~~~FklPD~--hGVF~F~vdY~ 275 (338)
..||-.|.|.|.+-+- +..+.|-.. .-+.+..+||-- |..+.....|.|+..|+||+. -|.|+.++.+.
T Consensus 11 ~iYrPGetV~~~~~~~---~~~~~p~~~--~~~~v~l~dp~g~~v~~~~~~~~~~G~~~~~f~Lp~~~~~G~y~i~~~~~ 85 (102)
T 2p9r_A 11 SIYKPGQTVKFRVVSM---DENFHPLNE--LIPLVYIQDPKGNRIAQWQSFQLEGGLKQFSFPLSSEPFQGSYKVVVQKK 85 (102)
T ss_dssp SEECTTCEEEEEEEEE---CGGGCBCCC--EEEEEEEECTTSCEEEEEEEEECBTTEEEEEEECCSSCCCEEEEEEEECT
T ss_pred cccCCCCEEEEEEEEE---CCCCcCCCC--CceEEEEECCCCCEEEEEEeecCCCCEEEEEEECCCCCCCeeEEEEEEEC
Confidence 4699999999998774 456777643 224555569853 323333568999999999987 69999999885
Q ss_pred e
Q psy3950 276 R 276 (338)
Q Consensus 276 R 276 (338)
.
T Consensus 86 ~ 86 (102)
T 2p9r_A 86 S 86 (102)
T ss_dssp T
T ss_pred C
Confidence 3
No 2
>3nrp_A Periplasmic protein-probably involved in high-AFF transport; immunoglobulin-like fold, iron transporter, copper binding; 1.60A {Escherichia coli} PDB: 3nrq_A
Probab=88.83 E-value=0.95 Score=39.51 Aligned_cols=71 Identities=18% Similarity=0.321 Sum_probs=49.1
Q ss_pred eCCceEEEEEEEEeeC-------CeeeeccCCceEEEEEEeC--eeeeeeecc--cCCc-eEEEEEecCCceeeeEEEEE
Q psy3950 206 IMDNVVFRLELERKSG-------NTWVPHNANDVQMEFVRID--PFVRTTLKS--IAQG-KYETVFKIPDVYGVYQFKVI 273 (338)
Q Consensus 206 I~D~v~ysi~i~e~~~-------~~WvPf~~dDiQlEf~mLD--Py~R~~L~~--~~~g-~y~~~FklPD~hGVF~F~vd 273 (338)
=.|+|+-+++|...++ |.|+||- +|..|++..| .-..-+|=| .+.| .|-.+.|||.. |-|+-++.
T Consensus 39 ~~sdiHLEAdI~a~e~n~~Gf~~G~~vPyL--~v~y~i~~~~~~~v~~g~~mPMvA~dGpHYG~NvkL~G~-G~Y~v~~~ 115 (160)
T 3nrp_A 39 AKADVHLEADIHAVEGNKNGFGAGEWIPYL--TISYTLVNNDTGEKQEGTFMPMVASDGPHYGANIKMMGV-GNYKVTYH 115 (160)
T ss_dssp GGCSEEEEEEEEECTTCSSSCCTTCBCCSC--EEEEEEEETTTCCEEEEECEEEEETTEEEEEEEECCCSS-EEEEEEEE
T ss_pred ccCCeEEEEEeeccccCcCcCcCCCCCCCc--eeEEEEEeCCCCeEEEeeccceecCCCCccccccCCCCC-ccEEEEEE
Confidence 4688999999998876 8999995 6888887553 233333222 2334 88888888665 77777766
Q ss_pred eeeccc
Q psy3950 274 YNRIGY 279 (338)
Q Consensus 274 Y~R~G~ 279 (338)
..-|+-
T Consensus 116 I~pPs~ 121 (160)
T 3nrp_A 116 IEPPSK 121 (160)
T ss_dssp EECGGG
T ss_pred ECCCcc
Confidence 655543
No 3
>2o6f_A 34 kDa membrane antigen; IG-fold, syphilis, metal-ION binding, dimer, membrane protei protein binding; 1.63A {Treponema pallidum} PDB: 2o6d_A 2o6e_A 2o6c_A
Probab=88.60 E-value=1 Score=40.31 Aligned_cols=72 Identities=10% Similarity=0.024 Sum_probs=51.2
Q ss_pred eCCceEEEEEEEEee--------CCeeeeccCCceEEEEEEeC-ee--eeeeecc--cCCceEEEEEecCCceeeeEEEE
Q psy3950 206 IMDNVVFRLELERKS--------GNTWVPHNANDVQMEFVRID-PF--VRTTLKS--IAQGKYETVFKIPDVYGVYQFKV 272 (338)
Q Consensus 206 I~D~v~ysi~i~e~~--------~~~WvPf~~dDiQlEf~mLD-Py--~R~~L~~--~~~g~y~~~FklPD~hGVF~F~v 272 (338)
=.++|+-+++|.... .|.|+||- .|+.+....+ .. .++.+.. +.+-.|-.+.||+..-|-|+-++
T Consensus 69 ~~sDiHLEADIha~~~~n~~Gf~~G~wvPyL--~V~~~i~k~g~~~v~~gtfmPM~A~DGPHYG~NvkL~G~~G~Y~vt~ 146 (189)
T 2o6f_A 69 EEADCHIEADIHANEAGKDLGYGVGDFVPYL--RVVAFLQKHGSEKVQKVMFAPMNAGDGPHYGANVKFEEGLGTYKVRF 146 (189)
T ss_dssp TTCSEEEEEEEEECGGGGGGTCCTTSBCCSC--EEEEEEEETTCCCCEEEECEEEEETTEEEEEEEECCTTCSEEEEEEE
T ss_pred ccCceEEEEEcchhhcCCccccccCCCcCce--EEEEEEEeCCCceEEEEeccccccCCCcccccccccCCCCccEEEEE
Confidence 367899999999887 79999985 6777777776 22 2333333 23348888888876668887777
Q ss_pred Eeeeccc
Q psy3950 273 IYNRIGY 279 (338)
Q Consensus 273 dY~R~G~ 279 (338)
...-|+-
T Consensus 147 ~I~pP~~ 153 (189)
T 2o6f_A 147 EIAAPSH 153 (189)
T ss_dssp EEECCCT
T ss_pred EEcCCCc
Confidence 7666643
No 4
>3lzq_A P19 protein; copper binding, iron transport, iron uptake, P19 delition, T protein; 1.41A {Campylobacter jejuni} PDB: 3lzn_A 3lzo_A 3lzp_A 3lzl_A 3lzr_A
Probab=70.50 E-value=22 Score=30.86 Aligned_cols=72 Identities=15% Similarity=0.286 Sum_probs=51.9
Q ss_pred eCCceEEEEEEEEeeC-------CeeeeccCCceEEEEEEeC--eeeeeeecc--cCCc-eEEEEEecC------Cceee
Q psy3950 206 IMDNVVFRLELERKSG-------NTWVPHNANDVQMEFVRID--PFVRTTLKS--IAQG-KYETVFKIP------DVYGV 267 (338)
Q Consensus 206 I~D~v~ysi~i~e~~~-------~~WvPf~~dDiQlEf~mLD--Py~R~~L~~--~~~g-~y~~~FklP------D~hGV 267 (338)
=..+|+-+.+|+...+ |.|+||- .|..|++..| .-.+-+|=| .+.| .|-.++||| +-=|-
T Consensus 37 ~~sdiHlEaDIha~~~n~~Gf~~G~wvPyL--~v~y~i~~~~~~~v~~g~~mPMvA~dGpHYG~NvkL~~~~~~~~G~G~ 114 (159)
T 3lzq_A 37 SLADIHLEADIHALKNNPNGFPEGFWMPYL--TIAYELKNTDTGAIKRGTLMPMVADDGPHYGANIAMEKDKKGGFGVGN 114 (159)
T ss_dssp GGCSEEEEEEEEECTTCTTCCCTTCBCCSC--EEEEEEEETTTCCEEEEECEEEEETTEEEEEEEECSTTCTTCCCSSEE
T ss_pred hhCCeEEEEecccccCCCCcccCCcCCcCc--eEEEEEEeCCCCeEEEeecceeecCCCCccccceeccccccCCCCCcc
Confidence 3578999999999865 5999995 6888888654 344444333 2344 899999998 67788
Q ss_pred eEEEEEeeeccc
Q psy3950 268 YQFKVIYNRIGY 279 (338)
Q Consensus 268 F~F~vdY~R~G~ 279 (338)
|+-++...-|+-
T Consensus 115 Y~v~~~I~pP~~ 126 (159)
T 3lzq_A 115 YELTFYISNPEK 126 (159)
T ss_dssp EEEEEEEECGGG
T ss_pred EEEEEEECCccc
Confidence 887777766653
No 5
>3pjl_A 34 kDa membrane antigen; IG fold, metal binding, human lactoferrin, membrane protein; 1.70A {Treponema pallidum} PDB: 3pjn_A
Probab=70.46 E-value=20 Score=32.43 Aligned_cols=71 Identities=10% Similarity=0.128 Sum_probs=52.0
Q ss_pred CCceEEEEEEEEeeC--------CeeeeccCCceEEEEEEeC--eeeeeeecc---cCCceEEEEEecCCceeeeEEEEE
Q psy3950 207 MDNVVFRLELERKSG--------NTWVPHNANDVQMEFVRID--PFVRTTLKS---IAQGKYETVFKIPDVYGVYQFKVI 273 (338)
Q Consensus 207 ~D~v~ysi~i~e~~~--------~~WvPf~~dDiQlEf~mLD--Py~R~~L~~---~~~g~y~~~FklPD~hGVF~F~vd 273 (338)
+.+|+-+.+|.-.++ |.|+||- .|..|++..| .-..-+|=| +.+-.|-.++|||+-=|-|+-++.
T Consensus 93 ~sDiHLEADIhA~~~~n~~Gf~~G~wvPYL--tV~y~Itk~d~~~v~eGtfmPMvAsDGPHYGdNVKL~~G~G~Y~vt~~ 170 (212)
T 3pjl_A 93 EADCHIEADIHANEAGKDLGYGVGDFVPYL--RVVAFLQKHGSEKVQKVMFAPMNAGDGPHYGANVKFEEGLGTYKVRFE 170 (212)
T ss_dssp TCSEEEEEEEEECGGGGGGTCCTTCBCCSC--EEEEEEEETTCCCCEEEECEEEEETTEEEEEEEECCTTCSEEEEEEEE
T ss_pred hCCeEEEEeccccccCCcccccCCCCCcCc--eeEEEEEeCCCCeEEEeeccccccCcCCccceeeccCCCCccEEEEEE
Confidence 458999999999853 8999995 6888888854 333333222 233489999999877799988887
Q ss_pred eeeccc
Q psy3950 274 YNRIGY 279 (338)
Q Consensus 274 Y~R~G~ 279 (338)
..-|+-
T Consensus 171 I~pPs~ 176 (212)
T 3pjl_A 171 IAAPSH 176 (212)
T ss_dssp EECCCT
T ss_pred EcCCCc
Confidence 776653
No 6
>2ds4_A Tripartite motif protein 45; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=66.26 E-value=27 Score=27.03 Aligned_cols=71 Identities=21% Similarity=0.262 Sum_probs=46.8
Q ss_pred ceEeCCceEEEEEEEEeeCCeeeeccCCceEEEEEEeC---eeeeeeecccCCceEEEEEecCCceeeeEEEEEee
Q psy3950 203 AYTIMDNVVFRLELERKSGNTWVPHNANDVQMEFVRID---PFVRTTLKSIAQGKYETVFKIPDVYGVYQFKVIYN 275 (338)
Q Consensus 203 ~Y~I~D~v~ysi~i~e~~~~~WvPf~~dDiQlEf~mLD---Py~R~~L~~~~~g~y~~~FklPD~hGVF~F~vdY~ 275 (338)
..++....+|.|+-..-. |+=..+-.|.++++..--| .-+...+...++|+|+++|+.+. -|-|+..|.+.
T Consensus 23 ~~~~g~~~~F~V~~~d~~-G~~~~~Gg~~~~v~i~~p~~~~~~~~~~v~D~~dGty~v~y~p~~-~G~y~i~V~~~ 96 (113)
T 2ds4_A 23 RAREKQTASFTLLCKDAA-GEIMGRGGDNVQVAVVPKDKKDSPVRTMVQDNKDGTYYISYTPKE-PGVYTVWVCIK 96 (113)
T ss_dssp EEETTCCEEEEEECBBTT-SSBCCCCCCCEEEEEEESSCSSCCCEEEEECCSSSEEEEEEECSS-SEEEEEEEEES
T ss_pred ceecCCcEEEEEEEECCC-CCCcccCCceEEEEEEecCCCCceeEEEEEECCCCEEEEEEEeCC-CeEEEEEEEEC
Confidence 377788888888766432 3222334567777776544 22334444457899999998665 59999999886
No 7
>3rgh_A Filamin-A; cell adhesion, cytoskeleton-complex, disease mutation, immun like, cytoskeleton, actin-binding, cell junction, shape; HET: CME; 2.44A {Homo sapiens} SCOP: b.1.18.0
Probab=62.74 E-value=16 Score=28.31 Aligned_cols=33 Identities=15% Similarity=0.333 Sum_probs=26.0
Q ss_pred eeeeecccCCceEEEEEecCCceeeeEEEEEeee
Q psy3950 243 VRTTLKSIAQGKYETVFKIPDVYGVYQFKVIYNR 276 (338)
Q Consensus 243 ~R~~L~~~~~g~y~~~FklPD~hGVF~F~vdY~R 276 (338)
++..++..++|+|.++|+ |..-|.|+..|.|.-
T Consensus 53 ~~~~v~d~~dGty~V~Y~-p~~~G~y~i~V~~~g 85 (100)
T 3rgh_A 53 AEVYIQDHGDGTHTITYI-PLCPGAYTVTIKYGG 85 (100)
T ss_dssp CEEEEEECSSSEEEEEEE-CCSSEEEEEEEEETT
T ss_pred eEEEEEeCCCCEEEEEEE-eCCCeeEEEEEEECC
Confidence 455555567899999999 667799999999863
No 8
>2hr0_A Complement C3 beta chain; complement component C3B, immune system; HET: THC; 2.26A {Homo sapiens} PDB: 2i07_A* 2wii_A* 2win_A* 2xwj_A* 3l3o_A* 3l5n_A* 3nms_A* 3nsa_A* 3ohx_A* 3t4a_A 2a74_A* 2a73_A* 2qki_A* 3g6j_A 2ice_A* 2icf_A* 2xwb_A*
Probab=54.53 E-value=31 Score=35.09 Aligned_cols=69 Identities=19% Similarity=0.334 Sum_probs=51.9
Q ss_pred CcceEeCCceEEEEEEEEeeCCeeeeccCCceEEEEEEeCeee----eeeeccc-CCceEEEEEecCCc--eeeeEEEEE
Q psy3950 201 PVAYTIMDNVVFRLELERKSGNTWVPHNANDVQMEFVRIDPFV----RTTLKSI-AQGKYETVFKIPDV--YGVYQFKVI 273 (338)
Q Consensus 201 p~~Y~I~D~v~ysi~i~e~~~~~WvPf~~dDiQlEf~mLDPy~----R~~L~~~-~~g~y~~~FklPD~--hGVF~F~vd 273 (338)
-..||-.|.|.|.+-+- +.++.|.. +. +.+...||-- |..++.. ..|.|+..|+||+. -|.|+.++.
T Consensus 114 R~iYrPGqtV~~r~i~~---d~~~~p~~-~~--v~v~l~dP~g~~i~~~~~~~~~~~G~~~~~f~Lp~~~~~G~w~I~v~ 187 (645)
T 2hr0_A 114 KTIYTPGSTVLYRIFTV---NHKLLPVG-RT--VMVNIENPEGIPVKQDSLSSQNQLGVLPLSWDIPELVNMGQWKIRAY 187 (645)
T ss_dssp CSBCCTTSEEEEEEEEE---CTTSCBCC-CE--EEEEEECTTSCEEEEEEEECTTTTTEEEEEEECCSSCCCSEEEEEEE
T ss_pred CccCCCCCEEEEEEEEE---CCCCcccC-ce--EEEEEECCCCCEEEEEEeeccccCCeEEEEEECCCccccccEEEEEE
Confidence 34699999999998764 35688854 44 4555679953 4445543 68999999999996 799999998
Q ss_pred ee
Q psy3950 274 YN 275 (338)
Q Consensus 274 Y~ 275 (338)
+.
T Consensus 188 ~~ 189 (645)
T 2hr0_A 188 YE 189 (645)
T ss_dssp ET
T ss_pred EC
Confidence 84
No 9
>2d7m_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=45.86 E-value=68 Score=25.18 Aligned_cols=61 Identities=15% Similarity=0.289 Sum_probs=39.2
Q ss_pred EeCCceEEEEEEEEeeCCeeeeccCCceEEEEEEeCee---eeeeecccCCceEEEEEecCCceeeeEEEEEeee
Q psy3950 205 TIMDNVVFRLELERKSGNTWVPHNANDVQMEFVRIDPF---VRTTLKSIAQGKYETVFKIPDVYGVYQFKVIYNR 276 (338)
Q Consensus 205 ~I~D~v~ysi~i~e~~~~~WvPf~~dDiQlEf~mLDPy---~R~~L~~~~~g~y~~~FklPD~hGVF~F~vdY~R 276 (338)
+.+...+|.|+-..- | .+.++++ +.+|- +...+...++|+|.++|+.+. -|.|+..|.|.-
T Consensus 27 ~~~~~~~F~V~~~da--G------~~~l~V~--v~~p~g~~~~~~v~d~~dGty~v~Y~p~~-~G~y~i~V~~~g 90 (115)
T 2d7m_A 27 PASLPVEFTIDARDA--G------EGLLTVQ--ILDPEGKPKKANIRDNGDGTYTVSYLPDM-SGRYTITIKYGG 90 (115)
T ss_dssp ESSSCEEEEEEESSS--C------SSCEEEE--EECTTSCBCCEEEEECSSSCEEEEECCCS-CEEEEEEEEESS
T ss_pred ccCCcEEEEEEECCC--C------CCEEEEE--EECCCCCeeeeEEEECCCCEEEEEEEeCC-CceEEEEEEECC
Confidence 456777777776532 1 1344443 45553 334444457899999997555 599999999963
No 10
>2d7n_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=44.40 E-value=45 Score=25.80 Aligned_cols=46 Identities=15% Similarity=0.245 Sum_probs=31.6
Q ss_pred CceEEEEEEeCe-eeeeeecccCCceEEEEEecCCceeeeEEEEEeee
Q psy3950 230 NDVQMEFVRIDP-FVRTTLKSIAQGKYETVFKIPDVYGVYQFKVIYNR 276 (338)
Q Consensus 230 dDiQlEf~mLDP-y~R~~L~~~~~g~y~~~FklPD~hGVF~F~vdY~R 276 (338)
+|+..|..+-+- -.+..++..++|+|+++|+ |..-|.|+..|.|+-
T Consensus 22 ~~l~v~V~~PsG~~~~~~v~d~~dGtY~v~yt-P~e~G~h~v~V~~~g 68 (93)
T 2d7n_A 22 GELTGEVRMPSGKTARPNITDNKDGTITVRYA-PTEKGLHQMGIKYDG 68 (93)
T ss_dssp SCEEEEEECTTSCEECCEEEECSSSCEEEEEC-CSSCEEEEEEEEESS
T ss_pred CCEEEEEECCCCCccceEEEECCCCEEEEEEE-ccCCEEEEEEEEECC
Confidence 666666654331 2344455457899999997 555599999999975
No 11
>2d7p_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10 PDB: 2eeb_A
Probab=44.17 E-value=42 Score=26.70 Aligned_cols=61 Identities=18% Similarity=0.229 Sum_probs=42.0
Q ss_pred eEeCCceEEEEEEEEeeCCeeeeccCCceEEEEEEeCeee---eeeecccCCceEEEEEecCCceeeeEEEEEeee
Q psy3950 204 YTIMDNVVFRLELERKSGNTWVPHNANDVQMEFVRIDPFV---RTTLKSIAQGKYETVFKIPDVYGVYQFKVIYNR 276 (338)
Q Consensus 204 Y~I~D~v~ysi~i~e~~~~~WvPf~~dDiQlEf~mLDPy~---R~~L~~~~~g~y~~~FklPD~hGVF~F~vdY~R 276 (338)
-+++....|.|....- + =+|+..+.+|-- ...++..++|+|.++| .|..-|.|+..|.|+.
T Consensus 24 ~~vg~~~~F~V~~~~a-~----------g~l~v~V~~P~g~~~~~~v~d~~~gty~v~y-tP~~~G~h~v~V~~~g 87 (112)
T 2d7p_A 24 LKVNQPASFAVQLNGA-R----------GVIDARVHTPSGAVEECYVSELDSDKHTIRF-IPHENGVHSIDVKFNG 87 (112)
T ss_dssp CCTTCCEEEEEECTTC-C----------SCEEEEEECSSSCBCCCEECSCBTTEEEEEE-CCSSCEEEEEEEEESS
T ss_pred cccCCcEEEEEEeCCC-C----------CCEEEEEECCCCCeeeeEEEeCCCCeEEEEE-EcCCCEeEEEEEEECC
Confidence 3566677777765421 1 155666677753 3344445689999999 7888899999999875
No 12
>2di7_A BK158_1; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=42.26 E-value=10 Score=31.36 Aligned_cols=31 Identities=6% Similarity=0.264 Sum_probs=26.6
Q ss_pred eecccCCceEEEEEecCCceeeeEEEEEeee
Q psy3950 246 TLKSIAQGKYETVFKIPDVYGVYQFKVIYNR 276 (338)
Q Consensus 246 ~L~~~~~g~y~~~FklPD~hGVF~F~vdY~R 276 (338)
.+.-.++|+|.+.+++|+.+|.|+..|-|+.
T Consensus 76 ~v~Dn~DGsy~v~Yr~~~~~g~~~I~V~~~~ 106 (124)
T 2di7_A 76 QVLDRKDGSFIVRYRMYASYKNLKVEIKFQG 106 (124)
T ss_dssp EEECCSSSCCEEECCCCSCCSCCEEEEESSS
T ss_pred EEEECCCCeEEEEEECCCCCCCEEEEEEECC
Confidence 3333578999999999999999999999975
No 13
>2dj4_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=40.88 E-value=53 Score=25.56 Aligned_cols=42 Identities=17% Similarity=0.230 Sum_probs=28.8
Q ss_pred EEEEEeCeee---eeeecccCCceEEEEEecCCceeeeEEEEEeee
Q psy3950 234 MEFVRIDPFV---RTTLKSIAQGKYETVFKIPDVYGVYQFKVIYNR 276 (338)
Q Consensus 234 lEf~mLDPy~---R~~L~~~~~g~y~~~FklPD~hGVF~F~vdY~R 276 (338)
|+..+.+|-- ...+...++|+|.++|+.+ .-|.|+..|.|.-
T Consensus 45 l~V~i~~p~g~~~~~~v~d~~dGty~v~Y~p~-~~G~y~i~V~~~g 89 (108)
T 2dj4_A 45 LEVRVLGPRGLVEPVNVVDNGDGTHTVTYTPS-QEGPYMVSVKYAD 89 (108)
T ss_dssp EEEEEECSSSCEECCCCEECSSSEEEEEECCS-SCEEEEEEEEESS
T ss_pred EEEEEECCCCCEeeeEEEECCCCEEEEEEEeC-CCeeEEEEEEECC
Confidence 3444556642 3333435789999999866 5699999999864
No 14
>2e9j_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=40.05 E-value=26 Score=27.94 Aligned_cols=61 Identities=20% Similarity=0.298 Sum_probs=38.4
Q ss_pred EeCCceEEEEEEEEeeCCeeeeccCCceEEEEEEeCee---eeeeecccCCceEEEEEecCCceeeeEEEEEeee
Q psy3950 205 TIMDNVVFRLELERKSGNTWVPHNANDVQMEFVRIDPF---VRTTLKSIAQGKYETVFKIPDVYGVYQFKVIYNR 276 (338)
Q Consensus 205 ~I~D~v~ysi~i~e~~~~~WvPf~~dDiQlEf~mLDPy---~R~~L~~~~~g~y~~~FklPD~hGVF~F~vdY~R 276 (338)
+++...+|.|+-..- | .++++++ +.+|- +...+...++|+|.++|+ |+.-|.|+..|.|.-
T Consensus 37 ~~g~~~~F~V~~~da--G------~~~l~v~--v~~p~g~~~~~~v~d~~dGty~v~Y~-p~~~G~y~i~V~~~g 100 (119)
T 2e9j_A 37 PASLPVDFAIDARDA--G------EGLLAVQ--ITDQEGKPKRAIVHDNKDGTYAVTYI-PDKTGRYMIGVTYGG 100 (119)
T ss_dssp ETTSCEEEEEEESSC--C------CCCEECC--EECTTCCCCCEEEEECCSSEEEEEEC-CCSCSEEEECCEESS
T ss_pred ecCCcEEEEEEECCC--C------CCeEEEE--EECCCCCEEEEEEEECCCCEEEEEEE-eCCCEEEEEEEEECC
Confidence 456666666665431 1 1333333 34553 344444457899999999 566999999999864
No 15
>4fxk_A Complement C4 beta chain; immune system, proteolytic cascade; HET: NAG BMA; 3.60A {Homo sapiens} PDB: 4fxg_A*
Probab=34.02 E-value=1.2e+02 Score=30.37 Aligned_cols=69 Identities=13% Similarity=0.283 Sum_probs=49.9
Q ss_pred CcceEeCCceEEEEEEEEeeCCeeeeccCCceEEEEEEeCeee----eeeecccCCceEEEEEecCCc--eeeeEEEEEe
Q psy3950 201 PVAYTIMDNVVFRLELERKSGNTWVPHNANDVQMEFVRIDPFV----RTTLKSIAQGKYETVFKIPDV--YGVYQFKVIY 274 (338)
Q Consensus 201 p~~Y~I~D~v~ysi~i~e~~~~~WvPf~~dDiQlEf~mLDPy~----R~~L~~~~~g~y~~~FklPD~--hGVF~F~vdY 274 (338)
-..||-.|.|.|.+-+- +..+.|.. + .+.+...||=- +..++ ...|.|+..|+||+. -|.|+..+.+
T Consensus 128 r~iYrPGqtV~~r~i~~---d~~~~p~~-~--~~~v~i~dp~g~~v~~~~~~-~~~G~~~~~f~Lp~~~~~G~w~i~v~~ 200 (656)
T 4fxk_A 128 QPIYNPGQRVRYRVFAL---DQKMRPST-D--TITVMVENSHGLRVRKKEVY-MPSSIFQDDFVIPDISEPGTWKISARF 200 (656)
T ss_dssp CSEECTTCEEEEEEEEE---CSSSSBCC-C--CEEEEEECTTCCEEEEEEEC-CTTSEEEEEEECCTTCCSEEEEEEEEE
T ss_pred CCCcCCCCEEEEEEEEE---CCccCcCc-c--cceEEEECCCCcEEeeeEEe-cCCceEEEEecCCCCCCCcCEEEEEEE
Confidence 34799999999998653 45677864 3 44556689833 33333 357999999999964 6999999988
Q ss_pred ee
Q psy3950 275 NR 276 (338)
Q Consensus 275 ~R 276 (338)
..
T Consensus 201 ~~ 202 (656)
T 4fxk_A 201 SD 202 (656)
T ss_dssp SS
T ss_pred cC
Confidence 54
No 16
>2b39_A C3; thioester, immune defense, immune system; HET: NAG BMA; 3.00A {Bos taurus}
Probab=33.01 E-value=74 Score=36.39 Aligned_cols=69 Identities=23% Similarity=0.348 Sum_probs=51.3
Q ss_pred CcceEeCCceEEEEEEEEeeCCeeeeccCCceEEEEEEeCeee----eeeecc-cCCceEEEEEecCCc--eeeeEEEEE
Q psy3950 201 PVAYTIMDNVVFRLELERKSGNTWVPHNANDVQMEFVRIDPFV----RTTLKS-IAQGKYETVFKIPDV--YGVYQFKVI 273 (338)
Q Consensus 201 p~~Y~I~D~v~ysi~i~e~~~~~WvPf~~dDiQlEf~mLDPy~----R~~L~~-~~~g~y~~~FklPD~--hGVF~F~vd 273 (338)
...||-.|.|.|.+-+- +.++.|.. ..+.++ ..||-- |..+++ +..|.|+..|+||+. -|.|+.++.
T Consensus 135 R~iYrPGqtV~~r~i~~---d~~~~p~~-~~v~v~--l~dP~g~~i~~~~~~~t~~~G~~~~~f~Lp~~~~~G~w~I~v~ 208 (1661)
T 2b39_A 135 KTIYTPGSTVLYRVFTV---DHKLLPVG-QTVFIT--IETPDGIPVKRDSKSSQNQFGILTLSWNIPELVNMGVWKIKAY 208 (1661)
T ss_dssp CSEECTTSEEEEEEEEE---CTTSCCCC-CCEEEE--EEETTEEEEEEEEECTTTTTSCCEEEEECCSSCCCEEEEEEEE
T ss_pred CCccCCCCEEEEEEEEE---CCCCcccC-ceEEEE--EECCCCCEEeeeeecccccCCeEeeeeeCCCCccccceEEEEE
Confidence 34699999999998665 35688854 455544 568853 344442 367999999999997 799999998
Q ss_pred ee
Q psy3950 274 YN 275 (338)
Q Consensus 274 Y~ 275 (338)
+.
T Consensus 209 ~~ 210 (1661)
T 2b39_A 209 YE 210 (1661)
T ss_dssp ET
T ss_pred ee
Confidence 85
No 17
>2dia_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=31.32 E-value=1.2e+02 Score=23.67 Aligned_cols=63 Identities=11% Similarity=0.249 Sum_probs=37.6
Q ss_pred EeCCceEEEEEEEEeeCCeeeeccCCceEEEEEEeC-eeeeeeecccCCceEEEEEecCCceeeeEEEEEeee
Q psy3950 205 TIMDNVVFRLELERKSGNTWVPHNANDVQMEFVRID-PFVRTTLKSIAQGKYETVFKIPDVYGVYQFKVIYNR 276 (338)
Q Consensus 205 ~I~D~v~ysi~i~e~~~~~WvPf~~dDiQlEf~mLD-Py~R~~L~~~~~g~y~~~FklPD~hGVF~F~vdY~R 276 (338)
+++...+|+|+-..- -.++++++..-=+ .-+...++..++|+|.++|+. ..-|.|+..|.|.-
T Consensus 25 ~~g~~~~F~V~~~da--------G~~~l~v~i~~~~g~~~~~~v~d~~dGty~v~Y~p-~~~G~y~i~V~~~g 88 (113)
T 2dia_A 25 KVGEAGLLSVDCSEA--------GPGALGLEAVSDSGTKAEVSIQNNKDGTYAVTYVP-LTAGMYTLTMKYGG 88 (113)
T ss_dssp ETTCCCCEEEEESSC--------CSCCEEEEEEETTTEECEEEEEECTTSEEEEEEEC-SSCEEEEEEEEETT
T ss_pred ecCCCEEEEEEECCC--------CCccEEEEEECCCCCEeeEEEEECCCCEEEEEEEe-CCCccEEEEEEECC
Confidence 445555566554421 1244555543212 133444554578999999975 56789999998864
No 18
>3cu7_A Complement C5; Mg domain, inflammation, anaphylatoxin, cleavage of basic residues, complement alternate pathway, glycoprotein, immune response; HET: NAG; 3.10A {Homo sapiens} PDB: 3kls_A* 3km9_A* 4e0s_A* 3prx_A* 3pvm_A* 4a5w_A* 1xwe_A
Probab=30.22 E-value=69 Score=36.63 Aligned_cols=68 Identities=25% Similarity=0.325 Sum_probs=50.7
Q ss_pred CcceEeCCceEEEEEEEEeeCCeeeeccCCceEEEEEEeCeee----eeeecccCCceEE-EEEecCCc--eeeeEEEEE
Q psy3950 201 PVAYTIMDNVVFRLELERKSGNTWVPHNANDVQMEFVRIDPFV----RTTLKSIAQGKYE-TVFKIPDV--YGVYQFKVI 273 (338)
Q Consensus 201 p~~Y~I~D~v~ysi~i~e~~~~~WvPf~~dDiQlEf~mLDPy~----R~~L~~~~~g~y~-~~FklPD~--hGVF~F~vd 273 (338)
-..||-.|.|.|.+-+- +.++.|.. +.+.++ ..||-- |..++. ..|.|+ .+|+||+. -|.|+.++.
T Consensus 132 R~iYrPGqtV~~r~i~~---d~~~~p~~-~~v~v~--l~dP~G~~i~~~~~~~-~~G~~~~~~f~Lp~~~~~G~w~I~v~ 204 (1676)
T 3cu7_A 132 KPVYTPDQSVKVRVYSL---NDDLKPAK-RETVLT--FIDPEGSEVDMVEEID-HIGIISFPDFKIPSNPRYGMWTIKAK 204 (1676)
T ss_dssp CSEECTTCEECEEEEEE---CTTCSCCC-CCEEEE--EEETTTEECCCEEECC-SSSEEECCCEECCSSCCCEEEEEEEE
T ss_pred CCccCCCCEEEEEEEEE---CCCCcccc-cceEEE--EECCCCCEEEEEeeec-CCCceecceeeCCCCccccceEEEEE
Confidence 34699999999988654 46688865 455544 568853 233333 679999 99999997 799999999
Q ss_pred ee
Q psy3950 274 YN 275 (338)
Q Consensus 274 Y~ 275 (338)
+.
T Consensus 205 ~~ 206 (1676)
T 3cu7_A 205 YK 206 (1676)
T ss_dssp BS
T ss_pred ec
Confidence 85
No 19
>2ee9_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=29.58 E-value=87 Score=24.37 Aligned_cols=46 Identities=11% Similarity=0.187 Sum_probs=31.8
Q ss_pred CceEEEEEEeC-eeeeeeecccCCceEEEEEecCCceeeeEEEEEeee
Q psy3950 230 NDVQMEFVRID-PFVRTTLKSIAQGKYETVFKIPDVYGVYQFKVIYNR 276 (338)
Q Consensus 230 dDiQlEf~mLD-Py~R~~L~~~~~g~y~~~FklPD~hGVF~F~vdY~R 276 (338)
.||..+.++-+ .-.+..++..++|+|+++|+ |..-|.++..|.|+-
T Consensus 30 ~~ltv~V~~PsG~~~~~~v~d~~dGtY~v~yt-P~e~G~h~v~V~~~G 76 (95)
T 2ee9_A 30 GEITGEVHMPSGKTATPEIVDNKDGTVTVRYA-PTEVGLHEMHIKYMG 76 (95)
T ss_dssp TSEEEEEECTTSCEECCEEEECSSSCEEEECC-CCSSEEEEEEEEESS
T ss_pred CCEEEEEECCCCCccccEEEeCCCCeEEEEEE-ecCCEeEEEEEEECC
Confidence 56665555544 12334444457899999885 888899999999974
No 20
>2dmb_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=29.41 E-value=90 Score=25.09 Aligned_cols=30 Identities=17% Similarity=0.380 Sum_probs=23.7
Q ss_pred eecccCCceEEEEEecCCceeeeEEEEEeee
Q psy3950 246 TLKSIAQGKYETVFKIPDVYGVYQFKVIYNR 276 (338)
Q Consensus 246 ~L~~~~~g~y~~~FklPD~hGVF~F~vdY~R 276 (338)
.+...++|+|.+.|+.+. -|-|+..|.|.-
T Consensus 60 ~v~d~~dGty~V~Y~p~~-~G~y~I~V~~~g 89 (124)
T 2dmb_A 60 DVIENEDGTYDIFYTAAK-PGTYVIYVRFGG 89 (124)
T ss_dssp EEEECTTSCEEEEEECSS-CEEEEEEEEESS
T ss_pred EEEeCCCCEEEEEEEcCC-CEEEEEEEEECC
Confidence 333357899999999775 599999999964
No 21
>2cov_D Beta-1,3-xylanase; carbohydrate-binding module, family 31 CBM, beta-1,3-xylanas binding protein; 1.25A {Alcaligenes SP}
Probab=27.07 E-value=1.5e+02 Score=23.61 Aligned_cols=61 Identities=21% Similarity=0.264 Sum_probs=36.7
Q ss_pred EEEEEEeeCCeeee---cc-CCceEEEEEEeCeeeeeeecccCCceEEEEEecCCceeeeEEEEEe
Q psy3950 213 RLELERKSGNTWVP---HN-ANDVQMEFVRIDPFVRTTLKSIAQGKYETVFKIPDVYGVYQFKVIY 274 (338)
Q Consensus 213 si~i~e~~~~~WvP---f~-~dDiQlEf~mLDPy~R~~L~~~~~g~y~~~FklPD~hGVF~F~vdY 274 (338)
+|++..-++ .|.. |. -||.=|.=.+-.--++.+....=+..|+.+||+-|..|-=||.++=
T Consensus 22 ~ievfH~d~-gWsAgwnY~CLd~yCl~g~ks~g~f~r~F~a~LGqtY~i~FKVeD~~g~gQ~i~dk 86 (104)
T 2cov_D 22 EIEVYHVDK-GWSAGWNYVCLNDYCLPGNKSNGAFRKTFNAVLGQDYKLTFKVEDRYGQGQQILDR 86 (104)
T ss_dssp EEEEEEECC-CCCCSSEEEEETTEEEECEEETTEEEEEEECCTTCEEEEEEEEEETTTTEEEEEEE
T ss_pred eEEEEEecC-CccceeeEEEecCeeccccccCCeeeeeechhcCcceeEEEEEecccCcceEEeee
Confidence 345554343 5654 22 2665555444433333333323356999999999999888888874
No 22
>2dlg_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=26.31 E-value=82 Score=24.62 Aligned_cols=68 Identities=18% Similarity=0.222 Sum_probs=44.5
Q ss_pred CCCCcceEeCCceEEEEEEEEeeCCeeeeccCCceEEEEEEeCeee---eeeecccCCceEEEEEecCCceeeeEEEEEe
Q psy3950 198 ENPPVAYTIMDNVVFRLELERKSGNTWVPHNANDVQMEFVRIDPFV---RTTLKSIAQGKYETVFKIPDVYGVYQFKVIY 274 (338)
Q Consensus 198 ~~~p~~Y~I~D~v~ysi~i~e~~~~~WvPf~~dDiQlEf~mLDPy~---R~~L~~~~~g~y~~~FklPD~hGVF~F~vdY 274 (338)
...+..-.+....+++|...+- ..+++ +-.+.+|-- ...++..++|+|+++|+ |..-|.|+..|.|
T Consensus 7 ~~~~~~~~vG~~~~ftv~~~~a--------g~~~l--~v~v~~P~G~~~~~~v~d~~dGty~v~yt-P~e~G~h~v~V~~ 75 (102)
T 2dlg_A 7 GRAPSVATVGSICDLNLKIPEI--------NSSDM--SAHVTSPSGRVTEAEIVPMGKNSHCVRFV-PQEMGVHTVSVKY 75 (102)
T ss_dssp SCCCCSBCSSSCBCCEEECTTS--------CGGGC--EEEEECTTSCEEECEEEECSSSEEEEEBC-CCTTCEEEEEEES
T ss_pred ccccccccCCCceEEEEEecCC--------CCCCE--EEEEECCCCCEeeeEEEECCCCEEEEEEE-ecCCEeEEEEEEE
Confidence 3455566777777777776521 12444 445556654 33445457899999996 5566999999988
Q ss_pred ee
Q psy3950 275 NR 276 (338)
Q Consensus 275 ~R 276 (338)
+-
T Consensus 76 ~g 77 (102)
T 2dlg_A 76 RG 77 (102)
T ss_dssp SS
T ss_pred CC
Confidence 74
No 23
>2pn5_A TEP1R, thioester-containing protein I; FULL-length mature peptide, immune system; HET: NAG; 2.70A {Anopheles gambiae}
Probab=25.98 E-value=1.6e+02 Score=32.66 Aligned_cols=69 Identities=20% Similarity=0.275 Sum_probs=49.0
Q ss_pred cceEeCCceEEEEEEEEeeCCeeeeccCC-ceEEEEEEeCeee----eeeecccCCceEEEEEecCCc--eeeeEEEEEe
Q psy3950 202 VAYTIMDNVVFRLELERKSGNTWVPHNAN-DVQMEFVRIDPFV----RTTLKSIAQGKYETVFKIPDV--YGVYQFKVIY 274 (338)
Q Consensus 202 ~~Y~I~D~v~ysi~i~e~~~~~WvPf~~d-DiQlEf~mLDPy~----R~~L~~~~~g~y~~~FklPD~--hGVF~F~vdY 274 (338)
..||-.|.|.|.+-+-. ....|-... .+.+| .+||-- |..+.....|.++.+|+||+. -|.|+.++.+
T Consensus 109 ~iYrPGqtV~~r~~~~~---~~~~p~~~~~~v~v~--l~dp~g~~i~~~~~~~~~~G~~~~~f~Lp~~~~~G~y~I~~~~ 183 (1325)
T 2pn5_A 109 PVFKPGDTVNFRVIVLD---TELKPPARVKSVYVT--IRDPQRNVIRKWSTAKLYAGVFESDLQIAPTPMLGVWNISVEV 183 (1325)
T ss_dssp SEECTTCEEEEEEEEEE---TTSSCCSSCCEEEEE--EECTTCCEEEEEEEEECBTTEEEEEEECCSSCCCEEEEEEEEE
T ss_pred CccCCCCEEEEEEEEec---CCccccccCccEEEE--EECCCCCEEEEEecccCCCCeEecceECCCCccccceEEEEEe
Confidence 46999999999987653 224666532 34554 468853 222222467999999999997 7999999988
Q ss_pred e
Q psy3950 275 N 275 (338)
Q Consensus 275 ~ 275 (338)
.
T Consensus 184 ~ 184 (1325)
T 2pn5_A 184 E 184 (1325)
T ss_dssp T
T ss_pred C
Confidence 5
No 24
>3cnk_A Filamin-A; FLNA24, X-RAY crystalography, homodimer, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; 1.65A {Homo sapiens}
Probab=25.90 E-value=1.1e+02 Score=22.64 Aligned_cols=32 Identities=16% Similarity=0.318 Sum_probs=24.1
Q ss_pred eeeecccCCceEEEEEecCCceeeeEEEEEeee
Q psy3950 244 RTTLKSIAQGKYETVFKIPDVYGVYQFKVIYNR 276 (338)
Q Consensus 244 R~~L~~~~~g~y~~~FklPD~hGVF~F~vdY~R 276 (338)
...++..++|+|.++|+.+ .-|-|+..|.|.-
T Consensus 45 ~~~v~d~~dGty~v~Y~p~-~~G~y~i~V~~~g 76 (89)
T 3cnk_A 45 EILVKHVGSRLYSVSYLLK-DKGEYTLVVKWGH 76 (89)
T ss_dssp EEEEEEEETTEEEEEEECC-SCEEEEEEEEETT
T ss_pred eEEEEECCCCEEEEEEEEC-CCccEEEEEEECC
Confidence 4444445789999999755 6788999998853
No 25
>1wlh_A Gelation factor; ABP-120, filamin, immunoglobulin fold, ROD domain, structural protein; 2.80A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10 b.1.18.10 PDB: 1ksr_A
Probab=25.46 E-value=1.7e+02 Score=26.61 Aligned_cols=66 Identities=17% Similarity=0.192 Sum_probs=39.3
Q ss_pred EeCCceEEEEEEEEeeCCeeeeccC--CceEEEEEEeCee---eeeeecccCCceEEEEEecCCceeeeEEEEEeee
Q psy3950 205 TIMDNVVFRLELERKSGNTWVPHNA--NDVQMEFVRIDPF---VRTTLKSIAQGKYETVFKIPDVYGVYQFKVIYNR 276 (338)
Q Consensus 205 ~I~D~v~ysi~i~e~~~~~WvPf~~--dDiQlEf~mLDPy---~R~~L~~~~~g~y~~~FklPD~hGVF~F~vdY~R 276 (338)
++....+|.|+...- .-.|..+ +++++ .+.+|- +...+...++|+|.++|+ |..-|.|+..|.|+-
T Consensus 119 ~~g~~~~f~V~~~D~---~G~~~~~g~~~~~v--~i~~p~g~~~~~~v~d~~dGty~v~y~-p~~~G~y~i~V~~~g 189 (311)
T 1wlh_A 119 FDNAPAEFTIFAVDT---KGVARTDGGDPFEV--AINGPDGLVVDAKVTDNNDGTYGVVYD-APVEGNYNVNVTLRG 189 (311)
T ss_dssp ESSSCEEEEEECBBS---SSSBCSSCCCCEEE--EEECTTSCBCCCEEEEETTTEEEEEEC-CCSSEEEEEEEEETT
T ss_pred ecCCCEEEEEEecCC---CCCEEecCCCcEEE--EEECCCCCeeeEEEEECCCCEEEEEEE-CCCCEEEEEEEEECC
Confidence 445566666654332 2223333 44444 444553 333444457899999996 566899999999863
No 26
>4b7l_A Filamin-B; structural protein, FR 1 filamin hinge ABD-1; 2.05A {Homo sapiens} PDB: 2wfn_A
Probab=24.35 E-value=1.3e+02 Score=28.58 Aligned_cols=62 Identities=16% Similarity=0.272 Sum_probs=45.3
Q ss_pred eEeCCceEEEEEEEEeeCCeeeeccCCceEEEEEEeCee---eeeeec--ccCCceEEEEEecCCceeeeEEEEEeee
Q psy3950 204 YTIMDNVVFRLELERKSGNTWVPHNANDVQMEFVRIDPF---VRTTLK--SIAQGKYETVFKIPDVYGVYQFKVIYNR 276 (338)
Q Consensus 204 Y~I~D~v~ysi~i~e~~~~~WvPf~~dDiQlEf~mLDPy---~R~~L~--~~~~g~y~~~FklPD~hGVF~F~vdY~R 276 (338)
=+++...+|+|+-.+ |..=+|+....+|- ....++ ..++|+|+++| .|..-|.|+..|.|..
T Consensus 269 ~~vg~p~~F~Vdt~~----------AG~g~l~v~V~~P~G~~~~~~v~~~~~~~gty~v~y-~P~~~G~~~I~V~~~g 335 (347)
T 4b7l_A 269 NMVKQPAKFTVDTIS----------AGQGDVMVFVEDPEGNKEEAQVTPDSDKNKTYSVEY-LPKVTGLHKVTVLFAG 335 (347)
T ss_dssp CCTTSCEEEEEECTT----------TCSCCEEEEEECTTSCEEECEEEESSTTCSEEEEEE-CCCSSSEEEEEEEETT
T ss_pred ceeCCEEEEEEEeCC----------CCCCceEEEEECCCCCeecCEEEEEcCCCCEEEEEE-EECCCEeEEEEEEECC
Confidence 367888888887652 33446777888883 343443 34679999999 6899999999999864
No 27
>1v05_A Filamin C; actin-binding protein, immunoglobulin; 1.43A {Homo sapiens} SCOP: b.1.18.10 PDB: 2eed_A
Probab=23.71 E-value=1.6e+02 Score=22.00 Aligned_cols=31 Identities=16% Similarity=0.387 Sum_probs=23.4
Q ss_pred eeecccCCceEEEEEecCCceeeeEEEEEeee
Q psy3950 245 TTLKSIAQGKYETVFKIPDVYGVYQFKVIYNR 276 (338)
Q Consensus 245 ~~L~~~~~g~y~~~FklPD~hGVF~F~vdY~R 276 (338)
..++..++|+|.++|+.+. -|.|+..|.|..
T Consensus 53 ~~v~d~~dGty~v~Y~p~~-~G~y~i~V~~~g 83 (96)
T 1v05_A 53 VYVKHMGNRVYNVTYTVKE-KGDYILIVKWGD 83 (96)
T ss_dssp EEEEECSTTEEEEEEECSS-CEEEEEEEEETT
T ss_pred EEEEeCCCCEEEEEEEeCC-CEEEEEEEEECC
Confidence 3444457899999998655 699998888753
No 28
>2pma_A Uncharacterized protein; APC86035.2, protein LPG0085, DUF785, legionella pneumophila pneumophila STR. philadelphia 1; 1.89A {Legionella pneumophila subsp} SCOP: b.50.1.3
Probab=23.45 E-value=86 Score=26.58 Aligned_cols=17 Identities=12% Similarity=0.210 Sum_probs=11.8
Q ss_pred EEEEEEeeCCeeeeccC
Q psy3950 213 RLELERKSGNTWVPHNA 229 (338)
Q Consensus 213 si~i~e~~~~~WvPf~~ 229 (338)
.|+.-|-++..||=|..
T Consensus 37 dI~~Ferdg~~wVrF~~ 53 (146)
T 2pma_A 37 NITEIEKKGIPYLRFTV 53 (146)
T ss_dssp EEEEEEETTEEEEEEEE
T ss_pred eEEEeeeCCCcEEEEEE
Confidence 34445667889999964
No 29
>2kng_A Protein LSR2; DNA-binding domain, immune response, DNA binding protein; NMR {Mycobacterium tuberculosis}
Probab=22.99 E-value=18 Score=26.11 Aligned_cols=20 Identities=30% Similarity=0.521 Sum_probs=18.4
Q ss_pred ChHHHHHHHHHcCeeecCCC
Q psy3950 14 SSDLLRELASESGFEMDEEG 33 (338)
Q Consensus 14 ~~~~ir~l~~E~gi~~~~~~ 33 (338)
-+..||+-|++-|++++++|
T Consensus 14 ~~~aIR~WAr~nG~~VsdRG 33 (55)
T 2kng_A 14 QSAAIREWARRNGHNVSTRG 33 (55)
T ss_dssp HHHHHHHHHHHTTCCCCSSS
T ss_pred ChHHHHHHHHHcCCcCCCCC
Confidence 46789999999999999998
No 30
>2dic_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=22.49 E-value=1.4e+02 Score=22.92 Aligned_cols=26 Identities=23% Similarity=0.450 Sum_probs=22.1
Q ss_pred cCCceEEEEEecCCceeeeEEEEEeee
Q psy3950 250 IAQGKYETVFKIPDVYGVYQFKVIYNR 276 (338)
Q Consensus 250 ~~~g~y~~~FklPD~hGVF~F~vdY~R 276 (338)
.++|+|.++| .|..-|.|+..|.|.-
T Consensus 61 ~~dGty~v~Y-~p~~~G~y~I~V~~~g 86 (105)
T 2dic_A 61 NKDGSCSAEY-IPFAPGDYDVNITYGG 86 (105)
T ss_dssp CSSSCEEEEE-CCSSCEEEEEEEEETT
T ss_pred CCCCeEEEEE-EeCCCeEEEEEEEECC
Confidence 4689999999 4777899999999864
No 31
>4g9j_C Synthetic peptide, serine/threonine-protein phosphatase PP1-alpha Ca subunit; activating peptide; 3.10A {Homo sapiens}
Probab=21.80 E-value=18 Score=21.72 Aligned_cols=16 Identities=38% Similarity=0.540 Sum_probs=12.3
Q ss_pred ecCCCEEEEEeccccc
Q psy3950 129 ARNNARVVFSGSLYFF 144 (338)
Q Consensus 129 arNnARv~~~GS~~~f 144 (338)
.|.|||++|.-..++.
T Consensus 8 krknarvtfaeaaeii 23 (26)
T 4g9j_C 8 KRKNARVTFAEAAEII 23 (26)
T ss_pred ccccceeeHHHhhhHh
Confidence 4889999998766654
No 32
>2k9u_A Gamma filamin; cytoskeletal complex, alternative splicing, cell adhesion, cell junction, cell shape, cytoplasm, cytoskeleton; NMR {Homo sapiens}
Probab=21.25 E-value=2.2e+02 Score=22.30 Aligned_cols=29 Identities=14% Similarity=0.405 Sum_probs=22.7
Q ss_pred ecccCCceEEEEEecCCceeeeEEEEEeee
Q psy3950 247 LKSIAQGKYETVFKIPDVYGVYQFKVIYNR 276 (338)
Q Consensus 247 L~~~~~g~y~~~FklPD~hGVF~F~vdY~R 276 (338)
+...++|+|.++|+.+. -|.|+..|.|+-
T Consensus 65 v~d~~dGty~v~Y~p~~-~G~y~I~V~~~g 93 (119)
T 2k9u_A 65 FEDRKDGSCGVSYVVQE-PGDYEVSIKFND 93 (119)
T ss_dssp EECCSSSEEEEEEECCS-SEEEEEEEEETS
T ss_pred EEECCCCEEEEEEEECC-CceEEEEEEECC
Confidence 33357899999998655 699999998863
No 33
>1qfh_A Protein (gelation factor); actin binding protein, immunoglobulin, ABP- 120; 2.20A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10
Probab=20.04 E-value=2.7e+02 Score=23.73 Aligned_cols=66 Identities=18% Similarity=0.269 Sum_probs=40.5
Q ss_pred EeCCceEEEEEEEEeeCCeeeecc--CCceEEEEEEeCee---eeeeecccCCceEEEEEecCCceeeeEEEEEeee
Q psy3950 205 TIMDNVVFRLELERKSGNTWVPHN--ANDVQMEFVRIDPF---VRTTLKSIAQGKYETVFKIPDVYGVYQFKVIYNR 276 (338)
Q Consensus 205 ~I~D~v~ysi~i~e~~~~~WvPf~--~dDiQlEf~mLDPy---~R~~L~~~~~g~y~~~FklPD~hGVF~F~vdY~R 276 (338)
.++...+|.|......+ .|.. .+.+++++. +|- +...+...++|+|.+.|+ |..-|.|+..|.|.-
T Consensus 20 ~~g~~~~F~V~~~D~~G---~~~~~G~~~~~v~i~--~p~g~~~~~~v~d~~dGty~v~y~-p~~~G~~~i~V~~~g 90 (212)
T 1qfh_A 20 FDNAPAEFTIFAVDTKG---VARTDGGDPFEVAIN--GPDGLVVDAKVTDNNDGTYGVVYD-APVEGNYNVNVTLRG 90 (212)
T ss_dssp ETTSCEEEEEECBBSSS---CBCSSCCCCEEEEEE--CGGGCEECCEEEECSSSEEEEEEC-CCSSEEEEEEEEETT
T ss_pred ecCCcEEEEEEEEcCCC---CEeecCCCeEEEEEE--CCCCCEeeeEEEECCCcEEEEEEE-CcCcEEEEEEEEECC
Confidence 35666667666543322 2322 355665543 442 223333346899999999 667899999998864
Done!