BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3951
(132 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|B1H3C9|OST48_XENTR Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48
kDa subunit OS=Xenopus tropicalis GN=ddost PE=2 SV=1
Length = 437
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 85/128 (66%), Positives = 103/128 (80%), Gaps = 1/128 (0%)
Query: 2 DNVVFRLELERKSGNTWVPHNANDVQMEFVRIDPFVRTTLKSIAQGKYETVFKIPDVYGV 61
D V + + +E+ S WVP + +D+Q+EFVRIDPFVRT LK GKY FK+PDVYGV
Sbjct: 310 DLVEYSIVIEQLSNGKWVPFDGDDIQLEFVRIDPFVRTFLKKNG-GKYSVQFKLPDVYGV 368
Query: 62 YQFKVIYNRIGYTGISNATQVSVRPLEHTQYERFISSAYPYYASAFSMMFGVFVFSIVFL 121
+QFKV YNR+GYT + + TQVSVRPL+HTQYERFI SAYPYYASAFS+MFG+F+FSIVFL
Sbjct: 369 FQFKVDYNRLGYTHLYSTTQVSVRPLQHTQYERFIPSAYPYYASAFSVMFGLFIFSIVFL 428
Query: 122 HYKDDEKS 129
H K+ EKS
Sbjct: 429 HMKEKEKS 436
>sp|Q6GNR9|OST48_XENLA Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48
kDa subunit OS=Xenopus laevis GN=ddost PE=2 SV=1
Length = 438
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 84/128 (65%), Positives = 103/128 (80%), Gaps = 1/128 (0%)
Query: 2 DNVVFRLELERKSGNTWVPHNANDVQMEFVRIDPFVRTTLKSIAQGKYETVFKIPDVYGV 61
D V + + +E+ S WVP + +D+Q+EFVRIDPFVRT LK GKY FK+PDVYGV
Sbjct: 311 DLVEYSIVIEKLSDGKWVPFDGDDIQLEFVRIDPFVRTFLKKNG-GKYSVQFKLPDVYGV 369
Query: 62 YQFKVIYNRIGYTGISNATQVSVRPLEHTQYERFISSAYPYYASAFSMMFGVFVFSIVFL 121
+QFKV YNR+GYT + + TQ+SVRPL+HTQYERFI SAYPYYASAFS+MFG+F+FSIVFL
Sbjct: 370 FQFKVDYNRLGYTHLYSTTQISVRPLQHTQYERFIPSAYPYYASAFSVMFGLFIFSIVFL 429
Query: 122 HYKDDEKS 129
H K+ EKS
Sbjct: 430 HMKEKEKS 437
>sp|P39656|OST48_HUMAN Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48
kDa subunit OS=Homo sapiens GN=DDOST PE=1 SV=4
Length = 456
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 84/128 (65%), Positives = 103/128 (80%), Gaps = 1/128 (0%)
Query: 2 DNVVFRLELERKSGNTWVPHNANDVQMEFVRIDPFVRTTLKSIAQGKYETVFKIPDVYGV 61
D V + + +++ S WVP + +D+Q+EFVRIDPFVRT LK GKY FK+PDVYGV
Sbjct: 329 DLVEYSIVIQQLSNGKWVPFDGDDIQLEFVRIDPFVRTFLKKKG-GKYSVQFKLPDVYGV 387
Query: 62 YQFKVIYNRIGYTGISNATQVSVRPLEHTQYERFISSAYPYYASAFSMMFGVFVFSIVFL 121
+QFKV YNR+GYT + ++TQVSVRPL+HTQYERFI SAYPYYASAFSMM G+F+FSIVFL
Sbjct: 388 FQFKVDYNRLGYTHLYSSTQVSVRPLQHTQYERFIPSAYPYYASAFSMMLGLFIFSIVFL 447
Query: 122 HYKDDEKS 129
H K+ EKS
Sbjct: 448 HMKEKEKS 455
>sp|A6QPY0|OST48_BOVIN Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48
kDa subunit OS=Bos taurus GN=DDOST PE=2 SV=2
Length = 439
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 84/128 (65%), Positives = 103/128 (80%), Gaps = 1/128 (0%)
Query: 2 DNVVFRLELERKSGNTWVPHNANDVQMEFVRIDPFVRTTLKSIAQGKYETVFKIPDVYGV 61
D V + + +E+ S WVP + +D+Q+EFVRIDPFVRT LK GKY FK+PDVYGV
Sbjct: 312 DLVEYSIVIEQLSDGKWVPFDGDDIQLEFVRIDPFVRTFLKRKG-GKYSVQFKLPDVYGV 370
Query: 62 YQFKVIYNRIGYTGISNATQVSVRPLEHTQYERFISSAYPYYASAFSMMFGVFVFSIVFL 121
+QFKV YNR+GYT + ++TQVSVRPL+HTQYERFI SAYPYYASAFSMM G+F+FS+VFL
Sbjct: 371 FQFKVDYNRLGYTHLYSSTQVSVRPLQHTQYERFIPSAYPYYASAFSMMLGLFIFSVVFL 430
Query: 122 HYKDDEKS 129
H K+ EKS
Sbjct: 431 HMKEKEKS 438
>sp|Q5R501|OST48_PONAB Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48
kDa subunit OS=Pongo abelii GN=DDOST PE=2 SV=2
Length = 439
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 84/128 (65%), Positives = 103/128 (80%), Gaps = 1/128 (0%)
Query: 2 DNVVFRLELERKSGNTWVPHNANDVQMEFVRIDPFVRTTLKSIAQGKYETVFKIPDVYGV 61
D V + + +++ S WVP + +D+Q+EFVRIDPFVRT LK GKY FK+PDVYGV
Sbjct: 312 DLVEYSIVIQQLSNGKWVPFDGDDIQLEFVRIDPFVRTFLKK-KGGKYSVQFKLPDVYGV 370
Query: 62 YQFKVIYNRIGYTGISNATQVSVRPLEHTQYERFISSAYPYYASAFSMMFGVFVFSIVFL 121
+QFKV YNR+GYT + ++TQVSVRPL+HTQYERFI SAYPYYASAFSMM G+F+FSIVFL
Sbjct: 371 FQFKVDYNRLGYTHLYSSTQVSVRPLQHTQYERFIPSAYPYYASAFSMMLGLFIFSIVFL 430
Query: 122 HYKDDEKS 129
H K+ EKS
Sbjct: 431 HMKEKEKS 438
>sp|Q05052|OST48_CANFA Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48
kDa subunit OS=Canis familiaris GN=DDOST PE=1 SV=1
Length = 445
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 84/128 (65%), Positives = 102/128 (79%), Gaps = 1/128 (0%)
Query: 2 DNVVFRLELERKSGNTWVPHNANDVQMEFVRIDPFVRTTLKSIAQGKYETVFKIPDVYGV 61
D V + + +E+ S WVP + +D+Q+EFVRIDPFVRT LK GKY FK+PDVYGV
Sbjct: 318 DLVEYSIVIEQLSNGRWVPFDGDDIQLEFVRIDPFVRTFLKKKG-GKYSVQFKLPDVYGV 376
Query: 62 YQFKVIYNRIGYTGISNATQVSVRPLEHTQYERFISSAYPYYASAFSMMFGVFVFSIVFL 121
+QFKV YNR+GYT + ++TQVSVRPL+HTQYERFI SAYPYYASAFSMM G+F+FS VFL
Sbjct: 377 FQFKVDYNRLGYTHLHSSTQVSVRPLQHTQYERFIPSAYPYYASAFSMMLGLFIFSTVFL 436
Query: 122 HYKDDEKS 129
H K+ EKS
Sbjct: 437 HMKEKEKS 444
>sp|O54734|OST48_MOUSE Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48
kDa subunit OS=Mus musculus GN=Ddost PE=1 SV=2
Length = 441
Score = 176 bits (446), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 85/128 (66%), Positives = 103/128 (80%), Gaps = 1/128 (0%)
Query: 2 DNVVFRLELERKSGNTWVPHNANDVQMEFVRIDPFVRTTLKSIAQGKYETVFKIPDVYGV 61
D V + + +E+ S WVP + +D+Q+EFVRIDPFVRT LK GKY FK+PDVYGV
Sbjct: 314 DLVEYSIIIEQLSNGKWVPFDGDDIQLEFVRIDPFVRTFLKR-KGGKYSVQFKLPDVYGV 372
Query: 62 YQFKVIYNRIGYTGISNATQVSVRPLEHTQYERFISSAYPYYASAFSMMFGVFVFSIVFL 121
+QFKV YNR+GYT + ++TQVSVRPL+HTQYERFI SAYPYYASAFSMM G+F+FSIVFL
Sbjct: 373 FQFKVDYNRLGYTHLYSSTQVSVRPLQHTQYERFIPSAYPYYASAFSMMAGLFIFSIVFL 432
Query: 122 HYKDDEKS 129
H K+ EKS
Sbjct: 433 HMKEKEKS 440
>sp|Q6NYS8|OST48_DANRE Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48
kDa subunit OS=Danio rerio GN=ddost PE=2 SV=2
Length = 441
Score = 176 bits (445), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 84/128 (65%), Positives = 103/128 (80%), Gaps = 1/128 (0%)
Query: 2 DNVVFRLELERKSGNTWVPHNANDVQMEFVRIDPFVRTTLKSIAQGKYETVFKIPDVYGV 61
D V + + +E SG WVP + +D+Q+EFVRIDPFVRT LK GKY FK+PDVYGV
Sbjct: 314 DLVEYGIVIEMLSGGKWVPFDGDDIQLEFVRIDPFVRTYLKKNG-GKYSVQFKLPDVYGV 372
Query: 62 YQFKVIYNRIGYTGISNATQVSVRPLEHTQYERFISSAYPYYASAFSMMFGVFVFSIVFL 121
+QFKV YNR+GYT + ++TQVSVRPL+HTQYERFI SA+PYYASAFSMM G+FVFS+VFL
Sbjct: 373 FQFKVDYNRLGYTHLYSSTQVSVRPLQHTQYERFIPSAFPYYASAFSMMAGLFVFSVVFL 432
Query: 122 HYKDDEKS 129
H ++ EKS
Sbjct: 433 HMREKEKS 440
>sp|Q641Y0|OST48_RAT Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48
kDa subunit OS=Rattus norvegicus GN=Ddost PE=2 SV=1
Length = 441
Score = 175 bits (443), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 84/128 (65%), Positives = 103/128 (80%), Gaps = 1/128 (0%)
Query: 2 DNVVFRLELERKSGNTWVPHNANDVQMEFVRIDPFVRTTLKSIAQGKYETVFKIPDVYGV 61
D V + + +E+ S WVP + +D+Q+EFVRIDPFVRT LK GKY FK+PDVYGV
Sbjct: 314 DLVEYSIVIEQLSNGKWVPFDGDDIQLEFVRIDPFVRTFLKRKG-GKYSVQFKLPDVYGV 372
Query: 62 YQFKVIYNRIGYTGISNATQVSVRPLEHTQYERFISSAYPYYASAFSMMFGVFVFSIVFL 121
+QFKV YNR+GYT + ++TQVSVRPL+HTQYERFI SAYPYYASAFSMM G+F+FS+VFL
Sbjct: 373 FQFKVDYNRLGYTHLYSSTQVSVRPLQHTQYERFIPSAYPYYASAFSMMAGLFLFSVVFL 432
Query: 122 HYKDDEKS 129
H K+ EKS
Sbjct: 433 HMKEKEKS 440
>sp|Q24319|OST48_DROME Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48
kDa subunit OS=Drosophila melanogaster GN=Ost48 PE=2
SV=2
Length = 449
Score = 175 bits (443), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 83/125 (66%), Positives = 96/125 (76%)
Query: 2 DNVVFRLELERKSGNTWVPHNANDVQMEFVRIDPFVRTTLKSIAQGKYETVFKIPDVYGV 61
D VV+ + +E W A+D+Q+EFVRIDPFVRT LK G Y+ FKIPDVYGV
Sbjct: 312 DPVVYTIGIEELVQGEWRAFKASDIQLEFVRIDPFVRTYLKQTNTGAYQAKFKIPDVYGV 371
Query: 62 YQFKVIYNRIGYTGISNATQVSVRPLEHTQYERFISSAYPYYASAFSMMFGVFVFSIVFL 121
YQFKV YNR+GYT + + TQVSVRPLEHTQYERFI SA+PYY SAFSMM GVFVFS VFL
Sbjct: 372 YQFKVDYNRVGYTHLYSTTQVSVRPLEHTQYERFIPSAFPYYTSAFSMMIGVFVFSFVFL 431
Query: 122 HYKDD 126
H+KD+
Sbjct: 432 HFKDE 436
>sp|P48440|OST48_CHICK Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48
kDa subunit OS=Gallus gallus GN=DDOST PE=1 SV=1
Length = 413
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 83/128 (64%), Positives = 102/128 (79%), Gaps = 1/128 (0%)
Query: 2 DNVVFRLELERKSGNTWVPHNANDVQMEFVRIDPFVRTTLKSIAQGKYETVFKIPDVYGV 61
D V + + +E+ S W+P + +D+Q+EFVRIDPFVRT LK GKY FK+PDVYGV
Sbjct: 286 DLVEYSIVIEKLSDGKWIPFDGDDIQLEFVRIDPFVRTFLKRNG-GKYSVQFKLPDVYGV 344
Query: 62 YQFKVIYNRIGYTGISNATQVSVRPLEHTQYERFISSAYPYYASAFSMMFGVFVFSIVFL 121
+QFKV YNR+GYT + ++TQVSVRPL+HTQYERFI SAYPYYA AFSMM G+F+FSIVFL
Sbjct: 345 FQFKVDYNRLGYTHLYSSTQVSVRPLQHTQYERFIPSAYPYYAGAFSMMVGLFMFSIVFL 404
Query: 122 HYKDDEKS 129
H K+ EKS
Sbjct: 405 HMKEKEKS 412
>sp|Q29381|OST48_PIG Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48
kDa subunit OS=Sus scrofa GN=DDOST PE=1 SV=2
Length = 439
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 84/128 (65%), Positives = 102/128 (79%), Gaps = 1/128 (0%)
Query: 2 DNVVFRLELERKSGNTWVPHNANDVQMEFVRIDPFVRTTLKSIAQGKYETVFKIPDVYGV 61
D V + + +E+ S WVP + +D+Q+EFVRIDPFVRT LK GKY FK PDVYGV
Sbjct: 312 DLVEYSIVIEQLSEGRWVPFDGDDIQLEFVRIDPFVRTFLKRKG-GKYSVQFKFPDVYGV 370
Query: 62 YQFKVIYNRIGYTGISNATQVSVRPLEHTQYERFISSAYPYYASAFSMMFGVFVFSIVFL 121
+QFKV YNR+GYT + ++TQVSVRPL+HTQYERFI SAYPYYASAFSMM G+F+FS+VFL
Sbjct: 371 FQFKVDYNRLGYTHLYSSTQVSVRPLQHTQYERFIPSAYPYYASAFSMMVGLFIFSVVFL 430
Query: 122 HYKDDEKS 129
H K+ EKS
Sbjct: 431 HMKEKEKS 438
>sp|P45971|OST48_CAEEL Probable dolichyl-diphosphooligosaccharide--protein
glycosyltransferase 48 kDa subunit OS=Caenorhabditis
elegans GN=T09A5.11 PE=3 SV=1
Length = 445
Score = 155 bits (393), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 73/124 (58%), Positives = 94/124 (75%), Gaps = 1/124 (0%)
Query: 2 DNVVFRLELERKSGNTWVPHNANDVQMEFVRIDPFVRTTLKSIAQGKYETVFKIPDVYGV 61
++VV+ +E+E WVP DVQ+EFVRIDPFVR TLK+ + G+ FK+PDV GV
Sbjct: 307 EDVVYTIEIEELKNGKWVPFQGKDVQLEFVRIDPFVRATLKN-SNGRLSVAFKLPDVLGV 365
Query: 62 YQFKVIYNRIGYTGISNATQVSVRPLEHTQYERFISSAYPYYASAFSMMFGVFVFSIVFL 121
++F V Y R+GYT + + QVSVRPL HTQYERFI SAYPYYAS+FSMM G+ +FSIV+L
Sbjct: 366 FKFLVDYRRVGYTHLYDVQQVSVRPLWHTQYERFIRSAYPYYASSFSMMAGLVLFSIVYL 425
Query: 122 HYKD 125
++KD
Sbjct: 426 YHKD 429
>sp|Q6ZLK0|OST48_ORYSJ Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48
kDa subunit OS=Oryza sativa subsp. japonica GN=OST48
PE=2 SV=1
Length = 439
Score = 138 bits (348), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 62/123 (50%), Positives = 91/123 (73%)
Query: 2 DNVVFRLELERKSGNTWVPHNANDVQMEFVRIDPFVRTTLKSIAQGKYETVFKIPDVYGV 61
D++ + +E+ SG +W P+ A+DVQ++F + P+V TL + +G + T FK+PDVYGV
Sbjct: 317 DDLEYSVEIYEWSGTSWKPYVADDVQVQFYMMSPYVLKTLSTDKKGVFSTSFKVPDVYGV 376
Query: 62 YQFKVIYNRIGYTGISNATQVSVRPLEHTQYERFISSAYPYYASAFSMMFGVFVFSIVFL 121
+QFKV Y R+GYTG+S + Q+ VRP H +YERFI+SAYPYYA++FS M F+FS V+L
Sbjct: 377 FQFKVEYQRLGYTGLSLSKQIPVRPYRHNEYERFITSAYPYYAASFSTMGAFFIFSFVYL 436
Query: 122 HYK 124
++K
Sbjct: 437 YHK 439
>sp|Q944K2|OST48_ARATH Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48
kDa subunit OS=Arabidopsis thaliana GN=OST48 PE=2 SV=1
Length = 437
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 61/123 (49%), Positives = 88/123 (71%)
Query: 2 DNVVFRLELERKSGNTWVPHNANDVQMEFVRIDPFVRTTLKSIAQGKYETVFKIPDVYGV 61
D++ F +E+ SG +W P+ ANDVQ++F + P+V TL + +G + T FK+PDVYGV
Sbjct: 315 DDLEFSVEIYEWSGKSWEPYVANDVQVQFYMMSPYVLKTLSTDKKGLFHTSFKVPDVYGV 374
Query: 62 YQFKVIYNRIGYTGISNATQVSVRPLEHTQYERFISSAYPYYASAFSMMFGVFVFSIVFL 121
+QFKV Y ++GYT +S + Q+ VRP H +YERFI +AYPYY + F+ M G FVFS V+L
Sbjct: 375 FQFKVEYEKLGYTTLSLSKQIPVRPYRHNEYERFIPTAYPYYGACFTTMAGFFVFSFVYL 434
Query: 122 HYK 124
++K
Sbjct: 435 YHK 437
>sp|Q54E62|OST48_DICDI Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48
kDa subunit OS=Dictyostelium discoideum GN=ddost PE=3
SV=1
Length = 426
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 53/126 (42%), Positives = 81/126 (64%), Gaps = 3/126 (2%)
Query: 2 DNVVFRLELERKSG--NTWVPHNANDVQMEFVRIDPFVRTTLKSIAQGKYETVFKIPDVY 59
D V + L++E G WVP+ +Q+E + +DP++RT +K A G Y+ FK+PDVY
Sbjct: 298 DEVKYSLKVEEFDGIKGKWVPY-VGSLQLEVIMLDPYIRTFIKGDANGLYKIHFKLPDVY 356
Query: 60 GVYQFKVIYNRIGYTGISNATQVSVRPLEHTQYERFISSAYPYYASAFSMMFGVFVFSIV 119
GV+ F+ ++ GY+ + + + + P H YERFI +A+PYYA+ FSM+ G F+FSI+
Sbjct: 357 GVFTFEASIHKSGYSTLDHIYRKPILPFRHDSYERFIPAAFPYYATCFSMLIGTFIFSII 416
Query: 120 FLHYKD 125
FL KD
Sbjct: 417 FLFNKD 422
>sp|O59866|OSTB_SCHPO Dolichyl-diphosphooligosaccharide--protein glycosyltransferase
subunit wbp1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=wbp1 PE=2 SV=2
Length = 437
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 67/128 (52%), Gaps = 5/128 (3%)
Query: 2 DNVVFRLELERKSGNTWVPHNANDVQMEFVRIDPFVRTTL-----KSIAQGKYETVFKIP 56
D ++F +++ P+ A+DVQ+E + +DP+ R L S YE V P
Sbjct: 297 DEMIFSIDISLLEDGQQTPYVADDVQLELIMLDPYYRVNLVPVPSDSQTSQHYEAVLVAP 356
Query: 57 DVYGVYQFKVIYNRIGYTGISNATQVSVRPLEHTQYERFISSAYPYYASAFSMMFGVFVF 116
D YG + FK+ Y R G T I + ++R H ++ RF+ AYPYYAS FS++ +F
Sbjct: 357 DHYGDFTFKIEYKRPGLTPIEEKSTFTLRQFFHNEFPRFLPHAYPYYASCFSVLGAFLLF 416
Query: 117 SIVFLHYK 124
++L K
Sbjct: 417 CGIWLLQK 424
>sp|P33767|OSTB_YEAST Dolichyl-diphosphooligosaccharide--protein glycosyltransferase
subunit WBP1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=WBP1 PE=1 SV=1
Length = 430
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 69/127 (54%), Gaps = 11/127 (8%)
Query: 2 DNVVFRLELERKSGNTWVPHNANDVQMEFVRIDPFVRTTLK---SIAQGKYETV--FKIP 56
D V++ + +G W+PH A+D+Q E ++DP+ R TL + ++ +Y T F +P
Sbjct: 288 DKVIYSVGFSEWNGEEWLPHIADDIQFELRQVDPYYRLTLSPSGNDSETQYYTTGEFILP 347
Query: 57 DVYGVYQFKVIYNRIGYTGISNATQVSVRPLEHTQYERF--ISSAYPYYASAFSMMFGVF 114
D +GV+ F Y +IG + ++ ++R L + +Y R IS+++ Y S + GV
Sbjct: 348 DRHGVFTFLTDYRKIGLSFTTDKDVKAIRHLANDEYPRSWEISNSWVY----ISAICGVI 403
Query: 115 VFSIVFL 121
V I F+
Sbjct: 404 VAWIFFV 410
>sp|Q5L3R6|IF1_GEOKA Translation initiation factor IF-1 OS=Geobacillus kaustophilus
(strain HTA426) GN=infA PE=3 SV=1
Length = 72
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 28/42 (66%), Gaps = 2/42 (4%)
Query: 1 MDNVVFRLELERKSGNTWVPHNANDVQMEFVRIDPFVRTTLK 42
+ N +FR+ELE +G+T + H + ++M F+RI P R T++
Sbjct: 17 LPNAMFRVELE--NGHTVLAHVSGKIRMHFIRILPGDRVTVE 56
>sp|A4IJL1|IF1_GEOTN Translation initiation factor IF-1 OS=Geobacillus
thermodenitrificans (strain NG80-2) GN=infA PE=3 SV=1
Length = 72
Score = 32.3 bits (72), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 28/42 (66%), Gaps = 2/42 (4%)
Query: 1 MDNVVFRLELERKSGNTWVPHNANDVQMEFVRIDPFVRTTLK 42
+ N +FR+ELE +G+T + H + ++M F+RI P + T++
Sbjct: 17 LPNAMFRVELE--NGHTVLAHVSGKIRMHFIRILPGDKVTVE 56
>sp|A8F9A8|IF1_BACP2 Translation initiation factor IF-1 OS=Bacillus pumilus (strain
SAFR-032) GN=infA PE=3 SV=1
Length = 72
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 28/42 (66%), Gaps = 2/42 (4%)
Query: 1 MDNVVFRLELERKSGNTWVPHNANDVQMEFVRIDPFVRTTLK 42
+ N +F++ELE +G+T + H + ++M F+RI P + T++
Sbjct: 17 LPNAMFKVELE--NGHTVLAHVSGKIRMHFIRILPGDKVTVE 56
>sp|P20458|IF1_BACSU Translation initiation factor IF-1 OS=Bacillus subtilis (strain
168) GN=infA PE=1 SV=2
Length = 72
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 28/42 (66%), Gaps = 2/42 (4%)
Query: 1 MDNVVFRLELERKSGNTWVPHNANDVQMEFVRIDPFVRTTLK 42
+ N +F++ELE +G+T + H + ++M F+RI P + T++
Sbjct: 17 LPNAMFKVELE--NGHTVLAHVSGKIRMHFIRILPGDKVTVE 56
>sp|A7Z0R1|IF1_BACA2 Translation initiation factor IF-1 OS=Bacillus amyloliquefaciens
(strain FZB42) GN=infA PE=3 SV=1
Length = 72
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 28/42 (66%), Gaps = 2/42 (4%)
Query: 1 MDNVVFRLELERKSGNTWVPHNANDVQMEFVRIDPFVRTTLK 42
+ N +F++ELE +G+T + H + ++M F+RI P + T++
Sbjct: 17 LPNAMFKVELE--NGHTVLAHVSGKIRMHFIRILPGDKVTVE 56
>sp|Q65P83|IF1_BACLD Translation initiation factor IF-1 OS=Bacillus licheniformis
(strain DSM 13 / ATCC 14580) GN=infA PE=3 SV=1
Length = 72
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 28/42 (66%), Gaps = 2/42 (4%)
Query: 1 MDNVVFRLELERKSGNTWVPHNANDVQMEFVRIDPFVRTTLK 42
+ N +F++ELE +G+T + H + ++M F+RI P + T++
Sbjct: 17 LPNAMFKVELE--NGHTVLAHVSGKIRMHFIRILPGDKVTVE 56
>sp|Q8ETW2|IF1_OCEIH Translation initiation factor IF-1 OS=Oceanobacillus iheyensis
(strain DSM 14371 / JCM 11309 / KCTC 3954 / HTE831)
GN=infA PE=3 SV=1
Length = 72
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 28/42 (66%), Gaps = 2/42 (4%)
Query: 1 MDNVVFRLELERKSGNTWVPHNANDVQMEFVRIDPFVRTTLK 42
+ N +F++ELE +G+T + H + ++M F+RI P + T++
Sbjct: 17 LPNAMFKVELE--NGHTVLAHVSGKIRMHFIRILPGDKVTVE 56
>sp|O50630|IF1_BACHD Translation initiation factor IF-1 OS=Bacillus halodurans (strain
ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 /
C-125) GN=infA PE=3 SV=3
Length = 72
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 27/42 (64%), Gaps = 2/42 (4%)
Query: 1 MDNVVFRLELERKSGNTWVPHNANDVQMEFVRIDPFVRTTLK 42
+ N +FR+ELE +G+ + H + ++M F+RI P + T++
Sbjct: 17 LPNAMFRVELE--NGHKILAHVSGKIRMHFIRILPGDKVTVE 56
>sp|Q5WLN9|IF1_BACSK Translation initiation factor IF-1 OS=Bacillus clausii (strain
KSM-K16) GN=infA PE=3 SV=1
Length = 72
Score = 30.4 bits (67), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 27/42 (64%), Gaps = 2/42 (4%)
Query: 1 MDNVVFRLELERKSGNTWVPHNANDVQMEFVRIDPFVRTTLK 42
+ N +FR+ELE +G+ + H + ++M F+RI P + T++
Sbjct: 17 LPNAMFRVELE--NGHKILAHVSGKIRMNFIRILPGDKVTVE 56
>sp|A4J134|IF1_DESRM Translation initiation factor IF-1 OS=Desulfotomaculum reducens
(strain MI-1) GN=infA PE=3 SV=1
Length = 72
Score = 30.0 bits (66), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 27/42 (64%), Gaps = 2/42 (4%)
Query: 1 MDNVVFRLELERKSGNTWVPHNANDVQMEFVRIDPFVRTTLK 42
+ N +FR+EL+ +G+ + H + ++M F+RI P R T++
Sbjct: 17 LPNAMFRVELQ--NGHKVLAHVSGKIRMNFIRILPGDRVTVE 56
>sp|Q3A9T9|IF1_CARHZ Translation initiation factor IF-1 OS=Carboxydothermus
hydrogenoformans (strain Z-2901 / DSM 6008) GN=infA
PE=3 SV=1
Length = 72
Score = 29.6 bits (65), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 27/42 (64%), Gaps = 2/42 (4%)
Query: 1 MDNVVFRLELERKSGNTWVPHNANDVQMEFVRIDPFVRTTLK 42
+ N +FR+EL+ +G+ + H + ++M F+RI P R T++
Sbjct: 17 LPNAMFRVELD--NGHKVLAHVSGKIRMNFIRILPGDRVTVE 56
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.137 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,956,326
Number of Sequences: 539616
Number of extensions: 1548980
Number of successful extensions: 3490
Number of sequences better than 100.0: 30
Number of HSP's better than 100.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 3458
Number of HSP's gapped (non-prelim): 30
length of query: 132
length of database: 191,569,459
effective HSP length: 98
effective length of query: 34
effective length of database: 138,687,091
effective search space: 4715361094
effective search space used: 4715361094
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 55 (25.8 bits)