Query psy3951
Match_columns 132
No_of_seqs 109 out of 183
Neff 4.5
Searched_HMMs 29240
Date Fri Aug 16 21:32:59 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3951.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/3951hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3nrp_A Periplasmic protein-pro 94.0 0.14 4.8E-06 39.2 6.4 69 2-73 41-121 (160)
2 2o6f_A 34 kDa membrane antigen 93.8 0.17 5.8E-06 39.7 6.8 71 1-73 70-153 (189)
3 2p9r_A Alpha-2-M, alpha-2-macr 92.2 1.1 3.7E-05 29.9 8.2 64 2-70 17-86 (102)
4 3pjl_A 34 kDa membrane antigen 87.0 4.3 0.00015 32.2 8.9 71 2-74 94-177 (212)
5 3rgh_A Filamin-A; cell adhesio 86.9 2.5 8.5E-05 28.5 6.7 45 24-69 39-84 (100)
6 2ds4_A Tripartite motif protei 86.3 4.4 0.00015 27.0 7.7 48 21-69 46-96 (113)
7 2d7n_A Filamin-C; beta-sandwic 85.0 2.5 8.4E-05 28.7 5.9 61 24-87 22-83 (93)
8 3lzq_A P19 protein; copper bin 84.1 6.5 0.00022 29.9 8.4 70 2-73 39-126 (159)
9 2ee9_A Filamin-B; beta-sandwic 80.2 3.6 0.00012 28.1 5.3 61 24-87 30-91 (95)
10 2dia_A Filamin-B; beta-sandwic 76.4 11 0.00038 25.5 6.9 46 24-70 42-88 (113)
11 2dj4_A Filamin-B; beta-sandwic 76.0 7.3 0.00025 26.3 5.8 42 28-70 45-89 (108)
12 2d7m_A Filamin-C; beta-sandwic 73.6 7.7 0.00026 26.4 5.5 44 24-70 44-90 (115)
13 2di7_A BK158_1; beta-sandwich, 71.2 1.7 6E-05 31.2 1.7 32 39-70 75-106 (124)
14 3cnk_A Filamin-A; FLNA24, X-RA 67.9 12 0.00042 24.1 5.3 33 37-70 44-76 (89)
15 2d7p_A Filamin-C; beta-sandwic 67.5 11 0.00039 25.9 5.3 60 27-89 42-104 (112)
16 1v05_A Filamin C; actin-bindin 67.5 16 0.00054 23.9 5.8 42 28-70 39-83 (96)
17 2e9j_A Filamin-B; beta-sandwic 63.4 5.3 0.00018 27.5 2.9 32 38-70 69-100 (119)
18 2dmb_A Filamin-B; beta-sandwic 63.1 17 0.00057 25.4 5.5 31 39-70 59-89 (124)
19 2dlg_A Filamin-B; beta-sandwic 60.3 9.2 0.00031 26.1 3.6 57 28-87 33-92 (102)
20 2k9u_A Gamma filamin; cytoskel 59.8 30 0.001 23.6 6.3 57 28-87 51-108 (119)
21 2bp3_A Filamin A; structural p 58.1 32 0.0011 22.5 6.0 28 41-69 53-80 (97)
22 2hr0_A Complement C3 beta chai 57.8 54 0.0018 28.2 8.8 63 1-69 120-189 (645)
23 1qfh_A Protein (gelation facto 56.2 36 0.0012 25.1 6.6 61 24-87 135-195 (212)
24 2k7p_A Filamin-A; IG-like, ABP 55.5 40 0.0014 24.8 6.8 44 24-70 34-80 (188)
25 2w0p_A Filamin-A; alternative 54.7 21 0.00071 23.3 4.6 28 41-69 50-77 (94)
26 1wlh_A Gelation factor; ABP-12 54.7 38 0.0013 26.3 6.8 44 24-70 143-189 (311)
27 2dmc_A Filamin-B; beta-sandwic 53.1 11 0.00039 26.1 3.2 43 27-70 46-91 (116)
28 1qfh_A Protein (gelation facto 49.6 41 0.0014 24.8 6.0 44 24-70 44-90 (212)
29 2dic_A Filamin-B; beta-sandwic 47.6 26 0.00089 23.4 4.2 26 44-70 61-86 (105)
30 2dib_A Filamin-B; beta-sandwic 46.2 18 0.00061 24.9 3.3 30 40-70 74-103 (128)
31 4b7l_A Filamin-B; structural p 46.0 36 0.0012 27.8 5.6 45 25-70 286-335 (347)
32 2eea_A Filamin-B; beta-sandwic 44.0 48 0.0016 22.4 5.2 44 24-70 52-96 (115)
33 2di8_A Filamin-B; beta-sandwic 42.4 25 0.00087 23.9 3.6 26 44-70 61-86 (111)
34 2di9_A Filamin-B; beta-sandwic 38.7 47 0.0016 23.1 4.6 28 42-70 79-106 (131)
35 2pma_A Uncharacterized protein 38.0 50 0.0017 24.3 4.8 17 7-23 37-53 (146)
36 1wlh_A Gelation factor; ABP-12 37.4 87 0.003 24.2 6.4 42 28-70 236-279 (311)
37 2b39_A C3; thioester, immune d 36.5 93 0.0032 30.3 7.5 63 1-69 141-210 (1661)
38 2k7p_A Filamin-A; IG-like, ABP 36.1 1E+02 0.0035 22.5 6.3 44 24-70 128-172 (188)
39 2ee6_A Filamin-B; beta-sandwic 35.9 32 0.0011 22.9 3.2 29 40-69 57-85 (105)
40 3cu7_A Complement C5; Mg domai 35.7 71 0.0024 31.1 6.6 61 2-69 139-206 (1676)
41 2d7o_A Filamin-C; beta-sandwic 31.4 39 0.0013 22.9 3.1 25 44-69 61-85 (111)
42 2ovs_A L0044, ORF10; global re 30.9 28 0.00096 25.1 2.3 16 45-60 11-27 (118)
43 2cov_D Beta-1,3-xylanase; carb 30.8 1.4E+02 0.0048 21.0 6.9 60 8-68 23-86 (104)
44 2k7q_A Filamin-A; IG-like, ABP 30.8 69 0.0023 23.3 4.5 28 41-69 144-171 (191)
45 2k7q_A Filamin-A; IG-like, ABP 30.0 84 0.0029 22.8 4.9 43 27-70 32-77 (191)
46 2pn5_A TEP1R, thioester-contai 29.4 2.3E+02 0.0078 26.7 8.7 63 2-69 115-184 (1325)
47 2erj_C Cytokine receptor commo 28.5 73 0.0025 24.0 4.5 43 30-72 134-176 (247)
48 4fxk_A Complement C4 beta chai 27.6 2.7E+02 0.0093 23.3 9.8 62 2-70 135-202 (656)
49 2b5i_C Cytokine receptor commo 27.3 59 0.002 23.1 3.6 42 31-72 97-138 (199)
50 3cvb_A Plastocyanin; cupredoxi 26.2 57 0.002 20.7 3.0 22 46-67 69-90 (105)
51 1z0n_A 5'-AMP-activated protei 24.9 70 0.0024 21.1 3.4 22 46-67 42-63 (96)
52 4eiu_A Uncharacterized hypothe 24.4 1.1E+02 0.0038 24.5 5.0 46 5-54 70-135 (249)
53 2nqc_A Filamin-C; immunoglobul 22.6 2E+02 0.007 20.3 5.7 41 28-70 78-119 (138)
54 1lqb_D HIF-1 alpha, hypoxia-in 22.2 11 0.00039 21.8 -0.9 19 20-38 1-19 (34)
55 2j3s_A Filamin-A; cytoskeleton 21.8 1.3E+02 0.0045 23.2 4.9 25 44-69 56-80 (288)
56 2j3s_A Filamin-A; cytoskeleton 21.4 1.3E+02 0.0045 23.2 4.8 29 41-70 244-272 (288)
57 2c9r_A COPC, copper resistance 20.7 1.3E+02 0.0045 20.2 4.1 31 37-67 67-102 (102)
58 2eec_A Filamin-B; beta-sandwic 20.5 2E+02 0.0069 19.7 5.2 25 44-70 71-95 (125)
59 3nme_A Ptpkis1 protein, SEX4 g 20.2 1.1E+02 0.0036 24.1 4.1 30 38-67 196-226 (294)
60 1lyq_A PCOC copper resistance 20.2 1.4E+02 0.0047 20.2 4.1 31 37-67 69-104 (104)
No 1
>3nrp_A Periplasmic protein-probably involved in high-AFF transport; immunoglobulin-like fold, iron transporter, copper binding; 1.60A {Escherichia coli} PDB: 3nrq_A
Probab=93.97 E-value=0.14 Score=39.22 Aligned_cols=69 Identities=17% Similarity=0.280 Sum_probs=48.4
Q ss_pred CcEEEEEEEEEeeC-------CeeEecccCCeEEEEEEeC--eeEeeeeec---cCCceEEEEEecCCceeeeEEEEEee
Q psy3951 2 DNVVFRLELERKSG-------NTWVPHNANDVQMEFVRID--PFVRTTLKS---IAQGKYETVFKIPDVYGVYQFKVIYN 69 (132)
Q Consensus 2 D~v~ysi~i~e~~~-------~~WvPf~~dDiQlEf~mLD--Py~R~~L~~---~~~g~y~~~FklPD~hGVf~F~v~Y~ 69 (132)
|+|+-+.+|...++ |.|+||- +|..|++..| .-..-++=| +.+..|-.+.|||.. |-|+-++...
T Consensus 41 sdiHLEAdI~a~e~n~~Gf~~G~~vPyL--~v~y~i~~~~~~~v~~g~~mPMvA~dGpHYG~NvkL~G~-G~Y~v~~~I~ 117 (160)
T 3nrp_A 41 ADVHLEADIHAVEGNKNGFGAGEWIPYL--TISYTLVNNDTGEKQEGTFMPMVASDGPHYGANIKMMGV-GNYKVTYHIE 117 (160)
T ss_dssp CSEEEEEEEEECTTCSSSCCTTCBCCSC--EEEEEEEETTTCCEEEEECEEEEETTEEEEEEEECCCSS-EEEEEEEEEE
T ss_pred CCeEEEEEeeccccCcCcCcCCCCCCCc--eeEEEEEeCCCCeEEEeeccceecCCCCccccccCCCCC-ccEEEEEEEC
Confidence 78999999998876 8999995 5888888654 222322222 234578888998665 8888777766
Q ss_pred eccc
Q psy3951 70 RIGY 73 (132)
Q Consensus 70 R~G~ 73 (132)
-++-
T Consensus 118 pPs~ 121 (160)
T 3nrp_A 118 PPSK 121 (160)
T ss_dssp CGGG
T ss_pred CCcc
Confidence 6543
No 2
>2o6f_A 34 kDa membrane antigen; IG-fold, syphilis, metal-ION binding, dimer, membrane protei protein binding; 1.63A {Treponema pallidum} PDB: 2o6d_A 2o6e_A 2o6c_A
Probab=93.82 E-value=0.17 Score=39.69 Aligned_cols=71 Identities=10% Similarity=0.037 Sum_probs=51.1
Q ss_pred CCcEEEEEEEEEee--------CCeeEecccCCeEEEEEEeC-ee--Eeeeeec--cCCceEEEEEecCCceeeeEEEEE
Q psy3951 1 MDNVVFRLELERKS--------GNTWVPHNANDVQMEFVRID-PF--VRTTLKS--IAQGKYETVFKIPDVYGVYQFKVI 67 (132)
Q Consensus 1 ~D~v~ysi~i~e~~--------~~~WvPf~~dDiQlEf~mLD-Py--~R~~L~~--~~~g~y~~~FklPD~hGVf~F~v~ 67 (132)
.++|+.+.+|.... .|.|+||- .|+.++...+ .. -.+.+.. +.+..|-.+.||+..-|-|+-++.
T Consensus 70 ~sDiHLEADIha~~~~n~~Gf~~G~wvPyL--~V~~~i~k~g~~~v~~gtfmPM~A~DGPHYG~NvkL~G~~G~Y~vt~~ 147 (189)
T 2o6f_A 70 EADCHIEADIHANEAGKDLGYGVGDFVPYL--RVVAFLQKHGSEKVQKVMFAPMNAGDGPHYGANVKFEEGLGTYKVRFE 147 (189)
T ss_dssp TCSEEEEEEEEECGGGGGGTCCTTSBCCSC--EEEEEEEETTCCCCEEEECEEEEETTEEEEEEEECCTTCSEEEEEEEE
T ss_pred cCceEEEEEcchhhcCCccccccCCCcCce--EEEEEEEeCCCceEEEEeccccccCCCcccccccccCCCCccEEEEEE
Confidence 37899999999877 79999985 5777777776 22 2333332 344579999998766688887777
Q ss_pred eeeccc
Q psy3951 68 YNRIGY 73 (132)
Q Consensus 68 Y~R~G~ 73 (132)
..-|+-
T Consensus 148 I~pP~~ 153 (189)
T 2o6f_A 148 IAAPSH 153 (189)
T ss_dssp EECCCT
T ss_pred EcCCCc
Confidence 666644
No 3
>2p9r_A Alpha-2-M, alpha-2-macroglobulin; human alpha2-macroglobulin, Mg2 domain, X-RAY, signaling protein; 2.30A {Homo sapiens}
Probab=92.18 E-value=1.1 Score=29.88 Aligned_cols=64 Identities=19% Similarity=0.177 Sum_probs=43.3
Q ss_pred CcEEEEEEEEEeeCCeeEecccCCeEEEEEEeCeeE----eeeeeccCCceEEEEEecCCc--eeeeEEEEEeee
Q psy3951 2 DNVVFRLELERKSGNTWVPHNANDVQMEFVRIDPFV----RTTLKSIAQGKYETVFKIPDV--YGVYQFKVIYNR 70 (132)
Q Consensus 2 D~v~ysi~i~e~~~~~WvPf~~dDiQlEf~mLDPy~----R~~L~~~~~g~y~~~FklPD~--hGVf~F~v~Y~R 70 (132)
|.|.+.+-+- +..+.|-.. .-+.+..+||-- |..+....+|.++.+|+||+. -|.|+.++....
T Consensus 17 etV~~~~~~~---~~~~~p~~~--~~~~v~l~dp~g~~v~~~~~~~~~~G~~~~~f~Lp~~~~~G~y~i~~~~~~ 86 (102)
T 2p9r_A 17 QTVKFRVVSM---DENFHPLNE--LIPLVYIQDPKGNRIAQWQSFQLEGGLKQFSFPLSSEPFQGSYKVVVQKKS 86 (102)
T ss_dssp CEEEEEEEEE---CGGGCBCCC--EEEEEEEECTTSCEEEEEEEEECBTTEEEEEEECCSSCCCEEEEEEEECTT
T ss_pred CEEEEEEEEE---CCCCcCCCC--CceEEEEECCCCCEEEEEEeecCCCCEEEEEEECCCCCCCeeEEEEEEECC
Confidence 6677776653 345677642 224555568853 323333568999999999987 699999998753
No 4
>3pjl_A 34 kDa membrane antigen; IG fold, metal binding, human lactoferrin, membrane protein; 1.70A {Treponema pallidum} PDB: 3pjn_A
Probab=86.97 E-value=4.3 Score=32.24 Aligned_cols=71 Identities=10% Similarity=0.140 Sum_probs=51.7
Q ss_pred CcEEEEEEEEEeeC--------CeeEecccCCeEEEEEEeC--eeEeeee-e--ccCCceEEEEEecCCceeeeEEEEEe
Q psy3951 2 DNVVFRLELERKSG--------NTWVPHNANDVQMEFVRID--PFVRTTL-K--SIAQGKYETVFKIPDVYGVYQFKVIY 68 (132)
Q Consensus 2 D~v~ysi~i~e~~~--------~~WvPf~~dDiQlEf~mLD--Py~R~~L-~--~~~~g~y~~~FklPD~hGVf~F~v~Y 68 (132)
.+|+.+.+|.-.++ |.|+||- +|..|++..| .-..-+| . .+.+..|-.++|||+-=|-|+-++..
T Consensus 94 sDiHLEADIhA~~~~n~~Gf~~G~wvPYL--tV~y~Itk~d~~~v~eGtfmPMvAsDGPHYGdNVKL~~G~G~Y~vt~~I 171 (212)
T 3pjl_A 94 ADCHIEADIHANEAGKDLGYGVGDFVPYL--RVVAFLQKHGSEKVQKVMFAPMNAGDGPHYGANVKFEEGLGTYKVRFEI 171 (212)
T ss_dssp CSEEEEEEEEECGGGGGGTCCTTCBCCSC--EEEEEEEETTCCCCEEEECEEEEETTEEEEEEEECCTTCSEEEEEEEEE
T ss_pred CCeEEEEeccccccCCcccccCCCCCcCc--eeEEEEEeCCCCeEEEeeccccccCcCCccceeeccCCCCccEEEEEEE
Confidence 57999999999853 8999995 6888888854 2222222 1 13445799999998777999988887
Q ss_pred eecccc
Q psy3951 69 NRIGYT 74 (132)
Q Consensus 69 ~R~G~t 74 (132)
.-++-.
T Consensus 172 ~pPs~~ 177 (212)
T 3pjl_A 172 AAPSHD 177 (212)
T ss_dssp ECCCTT
T ss_pred cCCCcC
Confidence 766533
No 5
>3rgh_A Filamin-A; cell adhesion, cytoskeleton-complex, disease mutation, immun like, cytoskeleton, actin-binding, cell junction, shape; HET: CME; 2.44A {Homo sapiens} SCOP: b.1.18.0
Probab=86.93 E-value=2.5 Score=28.49 Aligned_cols=45 Identities=13% Similarity=0.272 Sum_probs=31.2
Q ss_pred CCeEEEEEEeCe-eEeeeeeccCCceEEEEEecCCceeeeEEEEEee
Q psy3951 24 NDVQMEFVRIDP-FVRTTLKSIAQGKYETVFKIPDVYGVYQFKVIYN 69 (132)
Q Consensus 24 dDiQlEf~mLDP-y~R~~L~~~~~g~y~~~FklPD~hGVf~F~v~Y~ 69 (132)
++++++..--++ -++..++..++|+|.++|+ |..-|.|+..|.|.
T Consensus 39 ~~l~v~i~~~~g~~~~~~v~d~~dGty~V~Y~-p~~~G~y~i~V~~~ 84 (100)
T 3rgh_A 39 AELTIEICSEAGLPAEVYIQDHGDGTHTITYI-PLCPGAYTVTIKYG 84 (100)
T ss_dssp CCEEEEEECTTSCBCEEEEEECSSSEEEEEEE-CCSSEEEEEEEEET
T ss_pred ceEEEEEECCCCCEeEEEEEeCCCCEEEEEEE-eCCCeeEEEEEEEC
Confidence 345544432222 3455555568899999999 77789999999886
No 6
>2ds4_A Tripartite motif protein 45; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=86.30 E-value=4.4 Score=27.00 Aligned_cols=48 Identities=29% Similarity=0.433 Sum_probs=33.4
Q ss_pred cccCCeEEEEEEeC---eeEeeeeeccCCceEEEEEecCCceeeeEEEEEee
Q psy3951 21 HNANDVQMEFVRID---PFVRTTLKSIAQGKYETVFKIPDVYGVYQFKVIYN 69 (132)
Q Consensus 21 f~~dDiQlEf~mLD---Py~R~~L~~~~~g~y~~~FklPD~hGVf~F~v~Y~ 69 (132)
.-.|.++++..--| .-+...+...++|+|+++|+ |..-|.|+..|.+.
T Consensus 46 ~Gg~~~~v~i~~p~~~~~~~~~~v~D~~dGty~v~y~-p~~~G~y~i~V~~~ 96 (113)
T 2ds4_A 46 RGGDNVQVAVVPKDKKDSPVRTMVQDNKDGTYYISYT-PKEPGVYTVWVCIK 96 (113)
T ss_dssp CCCCCEEEEEEESSCSSCCCEEEEECCSSSEEEEEEE-CSSSEEEEEEEEES
T ss_pred cCCceEEEEEEecCCCCceeEEEEEECCCCEEEEEEE-eCCCeEEEEEEEEC
Confidence 33467777776544 23334444457899999998 55569999999886
No 7
>2d7n_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=85.00 E-value=2.5 Score=28.71 Aligned_cols=61 Identities=15% Similarity=0.170 Sum_probs=39.7
Q ss_pred CCeEEEEEEeCe-eEeeeeeccCCceEEEEEecCCceeeeEEEEEeeeccccceEeeeEEeeeCC
Q psy3951 24 NDVQMEFVRIDP-FVRTTLKSIAQGKYETVFKIPDVYGVYQFKVIYNRIGYTGISNATQVSVRPL 87 (132)
Q Consensus 24 dDiQlEf~mLDP-y~R~~L~~~~~g~y~~~FklPD~hGVf~F~v~Y~R~G~t~l~~~~~v~VRp~ 87 (132)
+|+..|..+-+- -.+..++..++|+|+++|. |..-|.|+..|.|+-. -.--+--++.|++.
T Consensus 22 ~~l~v~V~~PsG~~~~~~v~d~~dGtY~v~yt-P~e~G~h~v~V~~~g~--~I~GSPF~v~V~~~ 83 (93)
T 2d7n_A 22 GELTGEVRMPSGKTARPNITDNKDGTITVRYA-PTEKGLHQMGIKYDGN--HIPGSPLQFYVDAI 83 (93)
T ss_dssp SCEEEEEECTTSCEECCEEEECSSSCEEEEEC-CSSCEEEEEEEEESSS--CCTTCSEEEEECBC
T ss_pred CCEEEEEECCCCCccceEEEECCCCEEEEEEE-ccCCEEEEEEEEECCE--eCCCCCeEEEEecC
Confidence 666666654331 2344455557899999999 8888999999999752 22223345556543
No 8
>3lzq_A P19 protein; copper binding, iron transport, iron uptake, P19 delition, T protein; 1.41A {Campylobacter jejuni} PDB: 3lzn_A 3lzo_A 3lzp_A 3lzl_A 3lzr_A
Probab=84.11 E-value=6.5 Score=29.92 Aligned_cols=70 Identities=14% Similarity=0.227 Sum_probs=50.6
Q ss_pred CcEEEEEEEEEeeC-------CeeEecccCCeEEEEEEeC--eeEeeeeec---cCCceEEEEEecC------CceeeeE
Q psy3951 2 DNVVFRLELERKSG-------NTWVPHNANDVQMEFVRID--PFVRTTLKS---IAQGKYETVFKIP------DVYGVYQ 63 (132)
Q Consensus 2 D~v~ysi~i~e~~~-------~~WvPf~~dDiQlEf~mLD--Py~R~~L~~---~~~g~y~~~FklP------D~hGVf~ 63 (132)
.+|+.+.+|+..++ |.|+||- .|..|++..| .-.+-+|=| +.+..|-.+.||| +-=|-|+
T Consensus 39 sdiHlEaDIha~~~n~~Gf~~G~wvPyL--~v~y~i~~~~~~~v~~g~~mPMvA~dGpHYG~NvkL~~~~~~~~G~G~Y~ 116 (159)
T 3lzq_A 39 ADIHLEADIHALKNNPNGFPEGFWMPYL--TIAYELKNTDTGAIKRGTLMPMVADDGPHYGANIAMEKDKKGGFGVGNYE 116 (159)
T ss_dssp CSEEEEEEEEECTTCTTCCCTTCBCCSC--EEEEEEEETTTCCEEEEECEEEEETTEEEEEEEECSTTCTTCCCSSEEEE
T ss_pred CCeEEEEecccccCCCCcccCCcCCcCc--eEEEEEEeCCCCeEEEeecceeecCCCCccccceeccccccCCCCCccEE
Confidence 57999999999865 5999995 5888888654 333444322 2445799999998 6778888
Q ss_pred EEEEeeeccc
Q psy3951 64 FKVIYNRIGY 73 (132)
Q Consensus 64 F~v~Y~R~G~ 73 (132)
-++...-++-
T Consensus 117 v~~~I~pP~~ 126 (159)
T 3lzq_A 117 LTFYISNPEK 126 (159)
T ss_dssp EEEEEECGGG
T ss_pred EEEEECCccc
Confidence 8877776654
No 9
>2ee9_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=80.24 E-value=3.6 Score=28.14 Aligned_cols=61 Identities=11% Similarity=0.087 Sum_probs=38.7
Q ss_pred CCeEEEEEEeC-eeEeeeeeccCCceEEEEEecCCceeeeEEEEEeeeccccceEeeeEEeeeCC
Q psy3951 24 NDVQMEFVRID-PFVRTTLKSIAQGKYETVFKIPDVYGVYQFKVIYNRIGYTGISNATQVSVRPL 87 (132)
Q Consensus 24 dDiQlEf~mLD-Py~R~~L~~~~~g~y~~~FklPD~hGVf~F~v~Y~R~G~t~l~~~~~v~VRp~ 87 (132)
.||..+..+-+ .-.+..++..++|+|+++|. |..-|.++..|.|+- -..--+--++.|++.
T Consensus 30 ~~ltv~V~~PsG~~~~~~v~d~~dGtY~v~yt-P~e~G~h~v~V~~~G--~~I~GSPF~v~V~~~ 91 (95)
T 2ee9_A 30 GEITGEVHMPSGKTATPEIVDNKDGTVTVRYA-PTEVGLHEMHIKYMG--SHIPESPLQFYVNYP 91 (95)
T ss_dssp TSEEEEEECTTSCEECCEEEECSSSCEEEECC-CCSSEEEEEEEEESS--CBCTTCSEEEEECCT
T ss_pred CCEEEEEECCCCCccccEEEeCCCCeEEEEEE-ecCCEeEEEEEEECC--EECCCCCeEEEEecc
Confidence 55555555443 12334445457899999998 999999999999974 222223344555543
No 10
>2dia_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=76.42 E-value=11 Score=25.51 Aligned_cols=46 Identities=17% Similarity=0.369 Sum_probs=31.3
Q ss_pred CCeEEEEEEeC-eeEeeeeeccCCceEEEEEecCCceeeeEEEEEeee
Q psy3951 24 NDVQMEFVRID-PFVRTTLKSIAQGKYETVFKIPDVYGVYQFKVIYNR 70 (132)
Q Consensus 24 dDiQlEf~mLD-Py~R~~L~~~~~g~y~~~FklPD~hGVf~F~v~Y~R 70 (132)
++++++..-=+ .-+...++..++|+|.++|+ |..-|.|+..|.|.-
T Consensus 42 ~~l~v~i~~~~g~~~~~~v~d~~dGty~v~Y~-p~~~G~y~i~V~~~g 88 (113)
T 2dia_A 42 GALGLEAVSDSGTKAEVSIQNNKDGTYAVTYV-PLTAGMYTLTMKYGG 88 (113)
T ss_dssp CCEEEEEEETTTEECEEEEEECTTSEEEEEEE-CSSCEEEEEEEEETT
T ss_pred ccEEEEEECCCCCEeeEEEEECCCCEEEEEEE-eCCCccEEEEEEECC
Confidence 45555543222 23444555567899999998 677899999998863
No 11
>2dj4_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=76.02 E-value=7.3 Score=26.32 Aligned_cols=42 Identities=19% Similarity=0.323 Sum_probs=29.4
Q ss_pred EEEEEeCee---EeeeeeccCCceEEEEEecCCceeeeEEEEEeee
Q psy3951 28 MEFVRIDPF---VRTTLKSIAQGKYETVFKIPDVYGVYQFKVIYNR 70 (132)
Q Consensus 28 lEf~mLDPy---~R~~L~~~~~g~y~~~FklPD~hGVf~F~v~Y~R 70 (132)
|+..+.+|- +...++..++|+|.++|+ |..-|.|+..|.|.-
T Consensus 45 l~V~i~~p~g~~~~~~v~d~~dGty~v~Y~-p~~~G~y~i~V~~~g 89 (108)
T 2dj4_A 45 LEVRVLGPRGLVEPVNVVDNGDGTHTVTYT-PSQEGPYMVSVKYAD 89 (108)
T ss_dssp EEEEEECSSSCEECCCCEECSSSEEEEEEC-CSSCEEEEEEEEESS
T ss_pred EEEEEECCCCCEeeeEEEECCCCEEEEEEE-eCCCeeEEEEEEECC
Confidence 444455764 233444457899999998 556799999999863
No 12
>2d7m_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=73.59 E-value=7.7 Score=26.44 Aligned_cols=44 Identities=20% Similarity=0.509 Sum_probs=30.4
Q ss_pred CCeEEEEEEeCee---EeeeeeccCCceEEEEEecCCceeeeEEEEEeee
Q psy3951 24 NDVQMEFVRIDPF---VRTTLKSIAQGKYETVFKIPDVYGVYQFKVIYNR 70 (132)
Q Consensus 24 dDiQlEf~mLDPy---~R~~L~~~~~g~y~~~FklPD~hGVf~F~v~Y~R 70 (132)
++++++ +.+|- +...+...++|+|+++|+ |..-|.|+..|.|.-
T Consensus 44 ~~l~V~--v~~p~g~~~~~~v~d~~dGty~v~Y~-p~~~G~y~i~V~~~g 90 (115)
T 2d7m_A 44 GLLTVQ--ILDPEGKPKKANIRDNGDGTYTVSYL-PDMSGRYTITIKYGG 90 (115)
T ss_dssp SCEEEE--EECTTSCBCCEEEEECSSSCEEEEEC-CCSCEEEEEEEEESS
T ss_pred CEEEEE--EECCCCCeeeeEEEECCCCEEEEEEE-eCCCceEEEEEEECC
Confidence 445544 44553 344444457899999998 666699999999963
No 13
>2di7_A BK158_1; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=71.23 E-value=1.7 Score=31.16 Aligned_cols=32 Identities=6% Similarity=0.256 Sum_probs=26.9
Q ss_pred eeeeccCCceEEEEEecCCceeeeEEEEEeee
Q psy3951 39 TTLKSIAQGKYETVFKIPDVYGVYQFKVIYNR 70 (132)
Q Consensus 39 ~~L~~~~~g~y~~~FklPD~hGVf~F~v~Y~R 70 (132)
+...-.++|+|.+++++|+..|.++..|-++-
T Consensus 75 ~~v~Dn~DGsy~v~Yr~~~~~g~~~I~V~~~~ 106 (124)
T 2di7_A 75 VQVLDRKDGSFIVRYRMYASYKNLKVEIKFQG 106 (124)
T ss_dssp CEEECCSSSCCEEECCCCSCCSCCEEEEESSS
T ss_pred eEEEECCCCeEEEEEECCCCCCCEEEEEEECC
Confidence 33433578999999999999999999999875
No 14
>3cnk_A Filamin-A; FLNA24, X-RAY crystalography, homodimer, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; 1.65A {Homo sapiens}
Probab=67.87 E-value=12 Score=24.08 Aligned_cols=33 Identities=15% Similarity=0.249 Sum_probs=25.3
Q ss_pred EeeeeeccCCceEEEEEecCCceeeeEEEEEeee
Q psy3951 37 VRTTLKSIAQGKYETVFKIPDVYGVYQFKVIYNR 70 (132)
Q Consensus 37 ~R~~L~~~~~g~y~~~FklPD~hGVf~F~v~Y~R 70 (132)
+...++..++|+|+++++ |..-|.|+..|.+.-
T Consensus 44 ~~~~v~d~~dGty~v~Y~-p~~~G~y~i~V~~~g 76 (89)
T 3cnk_A 44 EEILVKHVGSRLYSVSYL-LKDKGEYTLVVKWGH 76 (89)
T ss_dssp SEEEEEEEETTEEEEEEE-CCSCEEEEEEEEETT
T ss_pred eeEEEEECCCCEEEEEEE-ECCCccEEEEEEECC
Confidence 344555557899999998 667899999998853
No 15
>2d7p_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10 PDB: 2eeb_A
Probab=67.55 E-value=11 Score=25.88 Aligned_cols=60 Identities=15% Similarity=0.133 Sum_probs=39.1
Q ss_pred EEEEEEeCeeE---eeeeeccCCceEEEEEecCCceeeeEEEEEeeeccccceEeeeEEeeeCCCC
Q psy3951 27 QMEFVRIDPFV---RTTLKSIAQGKYETVFKIPDVYGVYQFKVIYNRIGYTGISNATQVSVRPLEH 89 (132)
Q Consensus 27 QlEf~mLDPy~---R~~L~~~~~g~y~~~FklPD~hGVf~F~v~Y~R~G~t~l~~~~~v~VRp~~H 89 (132)
+|+....+|-- ...++..++|+|.++|. |..-|.|+..|.|+-. -.--+--++.|.+..+
T Consensus 42 ~l~v~V~~P~g~~~~~~v~d~~~gty~v~yt-P~~~G~h~v~V~~~g~--~I~GSPF~v~V~~~~~ 104 (112)
T 2d7p_A 42 VIDARVHTPSGAVEECYVSELDSDKHTIRFI-PHENGVHSIDVKFNGA--HIPGSPFKIRVGEQSQ 104 (112)
T ss_dssp CEEEEEECSSSCBCCCEECSCBTTEEEEEEC-CSSCEEEEEEEEESSC--BCTTCSEEEEECCCCC
T ss_pred CEEEEEECCCCCeeeeEEEeCCCCeEEEEEE-cCCCEeEEEEEEECCe--EcCCCCEEEEEecCCC
Confidence 55666667753 33444457799999995 9999999999998743 2222334555555433
No 16
>1v05_A Filamin C; actin-binding protein, immunoglobulin; 1.43A {Homo sapiens} SCOP: b.1.18.10 PDB: 2eed_A
Probab=67.52 E-value=16 Score=23.90 Aligned_cols=42 Identities=17% Similarity=0.218 Sum_probs=28.9
Q ss_pred EEEEEeCeeE---eeeeeccCCceEEEEEecCCceeeeEEEEEeee
Q psy3951 28 MEFVRIDPFV---RTTLKSIAQGKYETVFKIPDVYGVYQFKVIYNR 70 (132)
Q Consensus 28 lEf~mLDPy~---R~~L~~~~~g~y~~~FklPD~hGVf~F~v~Y~R 70 (132)
|+..+.+|-- ...++..++|+|.++++ |..-|.|+..|.+.-
T Consensus 39 l~v~v~~p~~~~~~~~v~d~~dGty~v~Y~-p~~~G~y~i~V~~~g 83 (96)
T 1v05_A 39 MMVGVHGPKTPCEEVYVKHMGNRVYNVTYT-VKEKGDYILIVKWGD 83 (96)
T ss_dssp EEEEEECSSSCCSEEEEEECSTTEEEEEEE-CSSCEEEEEEEEETT
T ss_pred EEEEEECCCCCeeEEEEEeCCCCEEEEEEE-eCCCEEEEEEEEECC
Confidence 3444455542 34455567899999999 566799999888753
No 17
>2e9j_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=63.39 E-value=5.3 Score=27.51 Aligned_cols=32 Identities=28% Similarity=0.551 Sum_probs=25.7
Q ss_pred eeeeeccCCceEEEEEecCCceeeeEEEEEeee
Q psy3951 38 RTTLKSIAQGKYETVFKIPDVYGVYQFKVIYNR 70 (132)
Q Consensus 38 R~~L~~~~~g~y~~~FklPD~hGVf~F~v~Y~R 70 (132)
...+...++|+|.++|+ |..-|.|+..|.|.-
T Consensus 69 ~~~v~d~~dGty~v~Y~-p~~~G~y~i~V~~~g 100 (119)
T 2e9j_A 69 RAIVHDNKDGTYAVTYI-PDKTGRYMIGVTYGG 100 (119)
T ss_dssp CEEEEECCSSEEEEEEC-CCSCSEEEECCEESS
T ss_pred EEEEEECCCCEEEEEEE-eCCCEEEEEEEEECC
Confidence 44455457899999999 788999999998864
No 18
>2dmb_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=63.13 E-value=17 Score=25.41 Aligned_cols=31 Identities=16% Similarity=0.356 Sum_probs=24.1
Q ss_pred eeeeccCCceEEEEEecCCceeeeEEEEEeee
Q psy3951 39 TTLKSIAQGKYETVFKIPDVYGVYQFKVIYNR 70 (132)
Q Consensus 39 ~~L~~~~~g~y~~~FklPD~hGVf~F~v~Y~R 70 (132)
..+...++|+|.+.|+ |..-|.|+..|.|.-
T Consensus 59 ~~v~d~~dGty~V~Y~-p~~~G~y~I~V~~~g 89 (124)
T 2dmb_A 59 ADVIENEDGTYDIFYT-AAKPGTYVIYVRFGG 89 (124)
T ss_dssp CEEEECTTSCEEEEEE-CSSCEEEEEEEEESS
T ss_pred eEEEeCCCCEEEEEEE-cCCCEEEEEEEEECC
Confidence 3444457899999999 456699999999964
No 19
>2dlg_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=60.31 E-value=9.2 Score=26.11 Aligned_cols=57 Identities=21% Similarity=0.234 Sum_probs=37.3
Q ss_pred EEEEEeCeeE---eeeeeccCCceEEEEEecCCceeeeEEEEEeeeccccceEeeeEEeeeCC
Q psy3951 28 MEFVRIDPFV---RTTLKSIAQGKYETVFKIPDVYGVYQFKVIYNRIGYTGISNATQVSVRPL 87 (132)
Q Consensus 28 lEf~mLDPy~---R~~L~~~~~g~y~~~FklPD~hGVf~F~v~Y~R~G~t~l~~~~~v~VRp~ 87 (132)
|+....+|-- ...++..++|+|+++|. |..-|.++..|.|+- --.--+--++.|+|.
T Consensus 33 l~v~v~~P~G~~~~~~v~d~~dGty~v~yt-P~e~G~h~v~V~~~g--~~I~GSPF~v~V~~~ 92 (102)
T 2dlg_A 33 MSAHVTSPSGRVTEAEIVPMGKNSHCVRFV-PQEMGVHTVSVKYRG--QHVTGSPFQFTVGPL 92 (102)
T ss_dssp CEEEEECTTSCEEECEEEECSSSEEEEEBC-CCTTCEEEEEEESSS--SBCSSCSEEEEBCCC
T ss_pred EEEEEECCCCCEeeeEEEECCCCEEEEEEE-ecCCEeEEEEEEECC--EeCCCCCeEEEECCC
Confidence 3444455543 33455567899999999 888899999998874 223333445556554
No 20
>2k9u_A Gamma filamin; cytoskeletal complex, alternative splicing, cell adhesion, cell junction, cell shape, cytoplasm, cytoskeleton; NMR {Homo sapiens}
Probab=59.82 E-value=30 Score=23.61 Aligned_cols=57 Identities=14% Similarity=0.180 Sum_probs=34.3
Q ss_pred EEEEEeCee-EeeeeeccCCceEEEEEecCCceeeeEEEEEeeeccccceEeeeEEeeeCC
Q psy3951 28 MEFVRIDPF-VRTTLKSIAQGKYETVFKIPDVYGVYQFKVIYNRIGYTGISNATQVSVRPL 87 (132)
Q Consensus 28 lEf~mLDPy-~R~~L~~~~~g~y~~~FklPD~hGVf~F~v~Y~R~G~t~l~~~~~v~VRp~ 87 (132)
|+....+|- +.+.++..++|+|.++++ |..-|.|+..|.++- --.-.+--.+.|.+-
T Consensus 51 l~v~v~~p~~~~~~v~d~~dGty~v~Y~-p~~~G~y~I~V~~~g--~~I~gSPF~v~v~~~ 108 (119)
T 2k9u_A 51 LSIAVEGPSKAEIAFEDRKDGSCGVSYV-VQEPGDYEVSIKFND--EHIPDSPFVVPVASL 108 (119)
T ss_dssp EEEEEESSSCCEEEEECCSSSEEEEEEE-CCSSEEEEEEEEETS--CBCSSCSEEEEEESS
T ss_pred EEEEEeCCCCCeEEEEECCCCEEEEEEE-ECCCceEEEEEEECC--EECCCCCEEEEEecC
Confidence 344445553 223344457899999998 566799999999863 222223344555543
No 21
>2bp3_A Filamin A; structural protein, cytoskeleton/complex, actin binding protein, cytoskeleton, complex; 2.32A {Homo sapiens} SCOP: b.1.18.10 PDB: 2aav_A
Probab=58.15 E-value=32 Score=22.48 Aligned_cols=28 Identities=25% Similarity=0.386 Sum_probs=22.6
Q ss_pred eeccCCceEEEEEecCCceeeeEEEEEee
Q psy3951 41 LKSIAQGKYETVFKIPDVYGVYQFKVIYN 69 (132)
Q Consensus 41 L~~~~~g~y~~~FklPD~hGVf~F~v~Y~ 69 (132)
+...++|+|.++++ |..-|.|+..|.+.
T Consensus 53 v~d~~dGty~v~Y~-p~~~G~y~i~V~~~ 80 (97)
T 2bp3_A 53 CTDNQDGTCSVSYL-PVLPGDYSILVKYN 80 (97)
T ss_dssp EEECSSSEEEEEEE-CSSCEEEEEEEEET
T ss_pred EEECCCCEEEEEEE-eCCCCcEEEEEEEC
Confidence 33357799999998 56679999999885
No 22
>2hr0_A Complement C3 beta chain; complement component C3B, immune system; HET: THC; 2.26A {Homo sapiens} PDB: 2i07_A* 2wii_A* 2win_A* 2xwj_A* 3l3o_A* 3l5n_A* 3nms_A* 3nsa_A* 3ohx_A* 3t4a_A 2a74_A* 2a73_A* 2qki_A* 3g6j_A 2ice_A* 2icf_A* 2xwb_A*
Probab=57.85 E-value=54 Score=28.21 Aligned_cols=63 Identities=17% Similarity=0.332 Sum_probs=44.3
Q ss_pred CCcEEEEEEEEEeeCCeeEecccCCeEEEEEEeCeeE----eeeeecc-CCceEEEEEecCCc--eeeeEEEEEee
Q psy3951 1 MDNVVFRLELERKSGNTWVPHNANDVQMEFVRIDPFV----RTTLKSI-AQGKYETVFKIPDV--YGVYQFKVIYN 69 (132)
Q Consensus 1 ~D~v~ysi~i~e~~~~~WvPf~~dDiQlEf~mLDPy~----R~~L~~~-~~g~y~~~FklPD~--hGVf~F~v~Y~ 69 (132)
.|.|.|.+-+- +..+.|.. +. +.+...||=- |..++.. ..|.++.+|+||+. -|.|+.++.+.
T Consensus 120 GqtV~~r~i~~---d~~~~p~~-~~--v~v~l~dP~g~~i~~~~~~~~~~~G~~~~~f~Lp~~~~~G~w~I~v~~~ 189 (645)
T 2hr0_A 120 GSTVLYRIFTV---NHKLLPVG-RT--VMVNIENPEGIPVKQDSLSSQNQLGVLPLSWDIPELVNMGQWKIRAYYE 189 (645)
T ss_dssp TSEEEEEEEEE---CTTSCBCC-CE--EEEEEECTTSCEEEEEEEECTTTTTEEEEEEECCSSCCCSEEEEEEEET
T ss_pred CCEEEEEEEEE---CCCCcccC-ce--EEEEEECCCCCEEEEEEeeccccCCeEEEEEECCCccccccEEEEEEEC
Confidence 36677776553 35578854 33 4555669853 3444543 67999999999996 79999999884
No 23
>1qfh_A Protein (gelation factor); actin binding protein, immunoglobulin, ABP- 120; 2.20A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10
Probab=56.19 E-value=36 Score=25.14 Aligned_cols=61 Identities=8% Similarity=0.020 Sum_probs=37.0
Q ss_pred CCeEEEEEEeCeeEeeeeeccCCceEEEEEecCCceeeeEEEEEeeeccccceEeeeEEeeeCC
Q psy3951 24 NDVQMEFVRIDPFVRTTLKSIAQGKYETVFKIPDVYGVYQFKVIYNRIGYTGISNATQVSVRPL 87 (132)
Q Consensus 24 dDiQlEf~mLDPy~R~~L~~~~~g~y~~~FklPD~hGVf~F~v~Y~R~G~t~l~~~~~v~VRp~ 87 (132)
+++++++..-+=-+...+...++|+|.++|. |..-|.|+..|.|.- -..-.+--.+.|++.
T Consensus 135 ~~l~v~i~~p~g~~~~~v~d~~dGty~v~y~-p~~~G~y~v~V~~~g--~~I~gSPF~v~V~~~ 195 (212)
T 1qfh_A 135 DKFEVSITGPAEEITLDAIDNQDGTYTAAYS-LVGNGRFSTGVKLNG--KHIEGSPFKQVLGNP 195 (212)
T ss_dssp CCEEEEEEECCSEEEEEEEECSSSEEEEEEE-EESSEEEEEEEEETT--EECBTCSEEEEESCG
T ss_pred CcEEEEEECCCCceeeEEEECCCCEEEEEEE-cCCCEEEEEEEEECC--EECCCCCeEEEEcCC
Confidence 5555555443222233333457899999998 666799999998853 222234445556554
No 24
>2k7p_A Filamin-A; IG-like, ABP-280, actin binding protein, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; NMR {Homo sapiens}
Probab=55.55 E-value=40 Score=24.79 Aligned_cols=44 Identities=16% Similarity=0.311 Sum_probs=30.9
Q ss_pred CCeEEEEEEeCeeE---eeeeeccCCceEEEEEecCCceeeeEEEEEeee
Q psy3951 24 NDVQMEFVRIDPFV---RTTLKSIAQGKYETVFKIPDVYGVYQFKVIYNR 70 (132)
Q Consensus 24 dDiQlEf~mLDPy~---R~~L~~~~~g~y~~~FklPD~hGVf~F~v~Y~R 70 (132)
.++..+. .+|-- ...++..++|+|++.|+ |..-|.++..|.|.-
T Consensus 34 ~~v~~~v--~~PsG~~~~~~v~d~~dgty~v~y~-P~~~G~h~i~V~~~g 80 (188)
T 2k7p_A 34 GEITGEV--RMPSGKVAQPTITDNKDGTVTVRYA-PSEAGLHEMDIRYDN 80 (188)
T ss_dssp SCEEEEE--ECTTSCEECCEEEECSSSEEEEEEC-CCCCEEEEEEEEETT
T ss_pred ceEEEEE--ECCCCCccccEEEeCCCCEEEEEEE-ccccEeEEEEEEECC
Confidence 4555544 44532 23344457799999999 788899999999973
No 25
>2w0p_A Filamin-A; alternative splicing, cytoskeleton/complex, phosphoprotein, disease mutation, immunoglobulin like, zinc, complex; 1.90A {Homo sapiens} SCOP: b.1.18.10 PDB: 2brq_A* 2jf1_A 3isw_A
Probab=54.73 E-value=21 Score=23.32 Aligned_cols=28 Identities=18% Similarity=0.339 Sum_probs=22.6
Q ss_pred eeccCCceEEEEEecCCceeeeEEEEEee
Q psy3951 41 LKSIAQGKYETVFKIPDVYGVYQFKVIYN 69 (132)
Q Consensus 41 L~~~~~g~y~~~FklPD~hGVf~F~v~Y~ 69 (132)
++..++|+|.++|+ |..-|.|+..|.++
T Consensus 50 v~d~~dGty~v~Y~-p~~~G~y~I~V~~~ 77 (94)
T 2w0p_A 50 FEDRKDGSCGVAYV-VQEPGDYEVSVKFN 77 (94)
T ss_dssp EEECTTSCEEEEEE-CSSCEEEEEEEEET
T ss_pred EEECCCCEEEEEEE-ECCCceEEEEEEEC
Confidence 34457899999999 56679999999875
No 26
>1wlh_A Gelation factor; ABP-120, filamin, immunoglobulin fold, ROD domain, structural protein; 2.80A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10 b.1.18.10 PDB: 1ksr_A
Probab=54.67 E-value=38 Score=26.33 Aligned_cols=44 Identities=20% Similarity=0.348 Sum_probs=30.2
Q ss_pred CCeEEEEEEeCee---EeeeeeccCCceEEEEEecCCceeeeEEEEEeee
Q psy3951 24 NDVQMEFVRIDPF---VRTTLKSIAQGKYETVFKIPDVYGVYQFKVIYNR 70 (132)
Q Consensus 24 dDiQlEf~mLDPy---~R~~L~~~~~g~y~~~FklPD~hGVf~F~v~Y~R 70 (132)
++++++ +.+|- +...+...++|+|.++|+ |..-|.|+..|.|+-
T Consensus 143 ~~~~v~--i~~p~g~~~~~~v~d~~dGty~v~y~-p~~~G~y~i~V~~~g 189 (311)
T 1wlh_A 143 DPFEVA--INGPDGLVVDAKVTDNNDGTYGVVYD-APVEGNYNVNVTLRG 189 (311)
T ss_dssp CCEEEE--EECTTSCBCCCEEEEETTTEEEEEEC-CCSSEEEEEEEEETT
T ss_pred CcEEEE--EECCCCCeeeEEEEECCCCEEEEEEE-CCCCEEEEEEEEECC
Confidence 444444 44552 334444457899999998 777899999998863
No 27
>2dmc_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=53.15 E-value=11 Score=26.09 Aligned_cols=43 Identities=16% Similarity=0.124 Sum_probs=32.6
Q ss_pred EEEEEEeCee---EeeeeeccCCceEEEEEecCCceeeeEEEEEeee
Q psy3951 27 QMEFVRIDPF---VRTTLKSIAQGKYETVFKIPDVYGVYQFKVIYNR 70 (132)
Q Consensus 27 QlEf~mLDPy---~R~~L~~~~~g~y~~~FklPD~hGVf~F~v~Y~R 70 (132)
+|+..+.+|- ....++..++|+|.++|. |..=|.++..|.|+-
T Consensus 46 ~l~v~v~~PsG~~~~~~v~~~~~g~y~v~ft-P~e~G~h~v~V~~~g 91 (116)
T 2dmc_A 46 SLTASIKAPSGRDEPCLLKRLPNNHIGISFI-PREVGEHLVSIKKNG 91 (116)
T ss_dssp TBCCEEECTTSCBCCEEEEEETTTEEEEEEC-CCSCEEEEEECBBSS
T ss_pred CEEEEEECCCCCEEeeEEEeCCCCeEEEEEE-eCCCeeEEEEEEECC
Confidence 3444566665 345566567899999998 999999999998864
No 28
>1qfh_A Protein (gelation factor); actin binding protein, immunoglobulin, ABP- 120; 2.20A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10
Probab=49.60 E-value=41 Score=24.82 Aligned_cols=44 Identities=20% Similarity=0.379 Sum_probs=30.8
Q ss_pred CCeEEEEEEeCee---EeeeeeccCCceEEEEEecCCceeeeEEEEEeee
Q psy3951 24 NDVQMEFVRIDPF---VRTTLKSIAQGKYETVFKIPDVYGVYQFKVIYNR 70 (132)
Q Consensus 24 dDiQlEf~mLDPy---~R~~L~~~~~g~y~~~FklPD~hGVf~F~v~Y~R 70 (132)
+.+++++. +|- +...+...++|+|.++|+ |..-|.|+..|.|.-
T Consensus 44 ~~~~v~i~--~p~g~~~~~~v~d~~dGty~v~y~-p~~~G~~~i~V~~~g 90 (212)
T 1qfh_A 44 DPFEVAIN--GPDGLVVDAKVTDNNDGTYGVVYD-APVEGNYNVNVTLRG 90 (212)
T ss_dssp CCEEEEEE--CGGGCEECCEEEECSSSEEEEEEC-CCSSEEEEEEEEETT
T ss_pred CeEEEEEE--CCCCCEeeeEEEECCCcEEEEEEE-CcCcEEEEEEEEECC
Confidence 55666654 442 233344457899999999 778999999998853
No 29
>2dic_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=47.57 E-value=26 Score=23.40 Aligned_cols=26 Identities=19% Similarity=0.372 Sum_probs=22.3
Q ss_pred cCCceEEEEEecCCceeeeEEEEEeee
Q psy3951 44 IAQGKYETVFKIPDVYGVYQFKVIYNR 70 (132)
Q Consensus 44 ~~~g~y~~~FklPD~hGVf~F~v~Y~R 70 (132)
.++|+|.++|+ |..-|.|+..|.|.-
T Consensus 61 ~~dGty~v~Y~-p~~~G~y~I~V~~~g 86 (105)
T 2dic_A 61 NKDGSCSAEYI-PFAPGDYDVNITYGG 86 (105)
T ss_dssp CSSSCEEEEEC-CSSCEEEEEEEEETT
T ss_pred CCCCeEEEEEE-eCCCeEEEEEEEECC
Confidence 47799999995 888899999998863
No 30
>2dib_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=46.24 E-value=18 Score=24.90 Aligned_cols=30 Identities=23% Similarity=0.421 Sum_probs=23.6
Q ss_pred eeeccCCceEEEEEecCCceeeeEEEEEeee
Q psy3951 40 TLKSIAQGKYETVFKIPDVYGVYQFKVIYNR 70 (132)
Q Consensus 40 ~L~~~~~g~y~~~FklPD~hGVf~F~v~Y~R 70 (132)
.+...++|+|.++|+ |..-|.|+..|.|+-
T Consensus 74 ~v~d~~dGty~v~Y~-p~~~G~~~i~V~~~g 103 (128)
T 2dib_A 74 FVTDNADGTYQVEYT-PFEKGLHVVEVTYDD 103 (128)
T ss_dssp EEEECSSSEEEEEEC-CSSCSEEEEEEBSSS
T ss_pred EEEECCCCEEEEEEE-eCCCEeEEEEEEECC
Confidence 334457899999998 666899999998864
No 31
>4b7l_A Filamin-B; structural protein, FR 1 filamin hinge ABD-1; 2.05A {Homo sapiens} PDB: 2wfn_A
Probab=46.03 E-value=36 Score=27.82 Aligned_cols=45 Identities=18% Similarity=0.278 Sum_probs=33.4
Q ss_pred CeEEEEEEeCee---Eeeeee--ccCCceEEEEEecCCceeeeEEEEEeee
Q psy3951 25 DVQMEFVRIDPF---VRTTLK--SIAQGKYETVFKIPDVYGVYQFKVIYNR 70 (132)
Q Consensus 25 DiQlEf~mLDPy---~R~~L~--~~~~g~y~~~FklPD~hGVf~F~v~Y~R 70 (132)
.=+|+..-.+|- ....++ ..++|+|+++|. |..-|.|+..|.|..
T Consensus 286 ~g~l~v~V~~P~G~~~~~~v~~~~~~~gty~v~y~-P~~~G~~~I~V~~~g 335 (347)
T 4b7l_A 286 QGDVMVFVEDPEGNKEEAQVTPDSDKNKTYSVEYL-PKVTGLHKVTVLFAG 335 (347)
T ss_dssp SCCEEEEEECTTSCEEECEEEESSTTCSEEEEEEC-CCSSSEEEEEEEETT
T ss_pred CCceEEEEECCCCCeecCEEEEEcCCCCEEEEEEE-ECCCEeEEEEEEECC
Confidence 346777778883 333343 346799999996 999999999999864
No 32
>2eea_A Filamin-B; beta-sandwich, immunoglobulin-like fold, interaction with GP1BA, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=44.04 E-value=48 Score=22.38 Aligned_cols=44 Identities=18% Similarity=0.333 Sum_probs=29.0
Q ss_pred CCeEEEEEEeCee-EeeeeeccCCceEEEEEecCCceeeeEEEEEeee
Q psy3951 24 NDVQMEFVRIDPF-VRTTLKSIAQGKYETVFKIPDVYGVYQFKVIYNR 70 (132)
Q Consensus 24 dDiQlEf~mLDPy-~R~~L~~~~~g~y~~~FklPD~hGVf~F~v~Y~R 70 (132)
++++++. .+|- +.+.....++|+|.++++ |..-|.|+..|.+.-
T Consensus 52 ~~l~v~v--~~p~~~~~~v~d~~dGty~v~Y~-p~~~G~y~I~V~~~g 96 (115)
T 2eea_A 52 GGLDLAI--EGPSKAEISCIDNKDGTCTVTYL-PTLPGDYSILVKYND 96 (115)
T ss_dssp SCEEEEE--ESSSCCEECCBCCSSSEEEEEEE-CSSCSCEEEEEEESS
T ss_pred CceEEEE--ECCCCceEEEEECCCCEEEEEEE-eCCCeeEEEEEEECC
Confidence 4455444 3443 122333357799999998 566799999998863
No 33
>2di8_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=42.44 E-value=25 Score=23.88 Aligned_cols=26 Identities=23% Similarity=0.492 Sum_probs=22.1
Q ss_pred cCCceEEEEEecCCceeeeEEEEEeee
Q psy3951 44 IAQGKYETVFKIPDVYGVYQFKVIYNR 70 (132)
Q Consensus 44 ~~~g~y~~~FklPD~hGVf~F~v~Y~R 70 (132)
.++|+|.++|+ |..-|.|+..|.+.-
T Consensus 61 ~~dGty~v~Y~-p~~~G~y~I~V~~~g 86 (111)
T 2di8_A 61 LEDGTCKVSYF-PTVPGVYIVSTKFAD 86 (111)
T ss_dssp CTTSCEEEEEC-CCSCSEEEEEEEESS
T ss_pred CCCCEEEEEEE-eCCCeEEEEEEEECC
Confidence 46799999998 677799999999864
No 34
>2di9_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=38.65 E-value=47 Score=23.12 Aligned_cols=28 Identities=14% Similarity=0.400 Sum_probs=22.9
Q ss_pred eccCCceEEEEEecCCceeeeEEEEEeee
Q psy3951 42 KSIAQGKYETVFKIPDVYGVYQFKVIYNR 70 (132)
Q Consensus 42 ~~~~~g~y~~~FklPD~hGVf~F~v~Y~R 70 (132)
+..++|+|.++++ |..-|.|+..|.+.-
T Consensus 79 ~d~~dGty~v~Y~-p~~~G~y~I~V~~~g 106 (131)
T 2di9_A 79 SDNGDGTCSVSYL-PTKPGEYFVNILFEE 106 (131)
T ss_dssp EECSSSEEEEEEE-CSSSSEEEEEEEESS
T ss_pred EECCCCEEEEEEE-eCCCeeEEEEEEECC
Confidence 3357799999998 677899999999864
No 35
>2pma_A Uncharacterized protein; APC86035.2, protein LPG0085, DUF785, legionella pneumophila pneumophila STR. philadelphia 1; 1.89A {Legionella pneumophila subsp} SCOP: b.50.1.3
Probab=37.96 E-value=50 Score=24.30 Aligned_cols=17 Identities=12% Similarity=0.210 Sum_probs=11.9
Q ss_pred EEEEEEeeCCeeEeccc
Q psy3951 7 RLELERKSGNTWVPHNA 23 (132)
Q Consensus 7 si~i~e~~~~~WvPf~~ 23 (132)
.|+.-|-++..||=|..
T Consensus 37 dI~~Ferdg~~wVrF~~ 53 (146)
T 2pma_A 37 NITEIEKKGIPYLRFTV 53 (146)
T ss_dssp EEEEEEETTEEEEEEEE
T ss_pred eEEEeeeCCCcEEEEEE
Confidence 34445557889999975
No 36
>1wlh_A Gelation factor; ABP-120, filamin, immunoglobulin fold, ROD domain, structural protein; 2.80A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10 b.1.18.10 PDB: 1ksr_A
Probab=37.43 E-value=87 Score=24.24 Aligned_cols=42 Identities=17% Similarity=0.196 Sum_probs=28.8
Q ss_pred EEEEEeCee--EeeeeeccCCceEEEEEecCCceeeeEEEEEeee
Q psy3951 28 MEFVRIDPF--VRTTLKSIAQGKYETVFKIPDVYGVYQFKVIYNR 70 (132)
Q Consensus 28 lEf~mLDPy--~R~~L~~~~~g~y~~~FklPD~hGVf~F~v~Y~R 70 (132)
|+....+|- +...+...++|+|+++|. |..-|.|+..|.|..
T Consensus 236 l~v~i~~p~g~~~~~v~d~~~G~y~v~y~-p~~~G~y~i~V~~~g 279 (311)
T 1wlh_A 236 FEVSITGPAEEITLDAIDNQDGTYTAAYS-LVGNGRFSTGVKLNG 279 (311)
T ss_dssp EEEEEESCCSEEEEEEEECSSSEEEEEEE-EECSEEEEEEEEETT
T ss_pred EEEEEECCCCCceeEEEECCCCEEEEEEE-CCCCEeEEEEEEECC
Confidence 344444552 222333457899999998 778999999998864
No 37
>2b39_A C3; thioester, immune defense, immune system; HET: NAG BMA; 3.00A {Bos taurus}
Probab=36.47 E-value=93 Score=30.29 Aligned_cols=63 Identities=22% Similarity=0.347 Sum_probs=43.6
Q ss_pred CCcEEEEEEEEEeeCCeeEecccCCeEEEEEEeCeeE----eeeeec-cCCceEEEEEecCCc--eeeeEEEEEee
Q psy3951 1 MDNVVFRLELERKSGNTWVPHNANDVQMEFVRIDPFV----RTTLKS-IAQGKYETVFKIPDV--YGVYQFKVIYN 69 (132)
Q Consensus 1 ~D~v~ysi~i~e~~~~~WvPf~~dDiQlEf~mLDPy~----R~~L~~-~~~g~y~~~FklPD~--hGVf~F~v~Y~ 69 (132)
.|.|.|.+-+- +..+.|.. ..+.++ ..||=- |..++. ...|.++.+|+||+. -|.|+.++.+.
T Consensus 141 GqtV~~r~i~~---d~~~~p~~-~~v~v~--l~dP~g~~i~~~~~~~t~~~G~~~~~f~Lp~~~~~G~w~I~v~~~ 210 (1661)
T 2b39_A 141 GSTVLYRVFTV---DHKLLPVG-QTVFIT--IETPDGIPVKRDSKSSQNQFGILTLSWNIPELVNMGVWKIKAYYE 210 (1661)
T ss_dssp TSEEEEEEEEE---CTTSCCCC-CCEEEE--EEETTEEEEEEEEECTTTTTSCCEEEEECCSSCCCEEEEEEEEET
T ss_pred CCEEEEEEEEE---CCCCcccC-ceEEEE--EECCCCCEEeeeeecccccCCeEeeeeeCCCCccccceEEEEEee
Confidence 36677776544 35577854 445544 458853 334442 367999999999997 79999999875
No 38
>2k7p_A Filamin-A; IG-like, ABP-280, actin binding protein, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; NMR {Homo sapiens}
Probab=36.05 E-value=1e+02 Score=22.48 Aligned_cols=44 Identities=18% Similarity=0.330 Sum_probs=29.0
Q ss_pred CCeEEEEEEeCee-EeeeeeccCCceEEEEEecCCceeeeEEEEEeee
Q psy3951 24 NDVQMEFVRIDPF-VRTTLKSIAQGKYETVFKIPDVYGVYQFKVIYNR 70 (132)
Q Consensus 24 dDiQlEf~mLDPy-~R~~L~~~~~g~y~~~FklPD~hGVf~F~v~Y~R 70 (132)
+++.++.. +|- ..+.++..++|+|.++|+ |..-|.|+..|.|+-
T Consensus 128 g~l~v~I~--gp~~~~~~~~d~~dGty~v~Y~-p~~~G~y~i~V~~~g 172 (188)
T 2k7p_A 128 GGLSLAIE--GPSKAEISCTDNQDGTCSVSYL-PVLPGDYSILVKYNE 172 (188)
T ss_dssp SCEEEEEE--CSSCCEEEEEECTTSEEEEEEE-CCSSEEEEEEEEETT
T ss_pred CCeEEEEe--CCCCCeEEEEECCCCEEEEEEE-eCCCEEEEEEEEECC
Confidence 44555443 442 122333357799999999 567899999998863
No 39
>2ee6_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=35.89 E-value=32 Score=22.86 Aligned_cols=29 Identities=17% Similarity=0.347 Sum_probs=22.7
Q ss_pred eeeccCCceEEEEEecCCceeeeEEEEEee
Q psy3951 40 TLKSIAQGKYETVFKIPDVYGVYQFKVIYN 69 (132)
Q Consensus 40 ~L~~~~~g~y~~~FklPD~hGVf~F~v~Y~ 69 (132)
.++..++|+|.++++. ..-|.|+..|.++
T Consensus 57 ~v~d~~dGty~v~Y~p-~~~G~y~I~V~~~ 85 (105)
T 2ee6_A 57 TFDDHKNGSCGVSYIA-QEPGNYEVSIKFN 85 (105)
T ss_dssp EECCCCSSCCCEEEEE-SSCEEEEEEEEET
T ss_pred EEEECCCCEEEEEEEE-CCCceEEEEEEEC
Confidence 3444577999999984 5669999999885
No 40
>3cu7_A Complement C5; Mg domain, inflammation, anaphylatoxin, cleavage of basic residues, complement alternate pathway, glycoprotein, immune response; HET: NAG; 3.10A {Homo sapiens} PDB: 3kls_A* 3km9_A* 4e0s_A* 3prx_A* 3pvm_A* 4a5w_A* 1xwe_A
Probab=35.71 E-value=71 Score=31.08 Aligned_cols=61 Identities=25% Similarity=0.349 Sum_probs=42.6
Q ss_pred CcEEEEEEEEEeeCCeeEecccCCeEEEEEEeCeeE----eeeeeccCCceEE-EEEecCCc--eeeeEEEEEee
Q psy3951 2 DNVVFRLELERKSGNTWVPHNANDVQMEFVRIDPFV----RTTLKSIAQGKYE-TVFKIPDV--YGVYQFKVIYN 69 (132)
Q Consensus 2 D~v~ysi~i~e~~~~~WvPf~~dDiQlEf~mLDPy~----R~~L~~~~~g~y~-~~FklPD~--hGVf~F~v~Y~ 69 (132)
|.|.+.+-+- +..+.|.. +.+.++ ..||-- |..++. ..|.++ .+|+||+. -|.|+.++.+.
T Consensus 139 qtV~~r~i~~---d~~~~p~~-~~v~v~--l~dP~G~~i~~~~~~~-~~G~~~~~~f~Lp~~~~~G~w~I~v~~~ 206 (1676)
T 3cu7_A 139 QSVKVRVYSL---NDDLKPAK-RETVLT--FIDPEGSEVDMVEEID-HIGIISFPDFKIPSNPRYGMWTIKAKYK 206 (1676)
T ss_dssp CEECEEEEEE---CTTCSCCC-CCEEEE--EEETTTEECCCEEECC-SSSEEECCCEECCSSCCCEEEEEEEEBS
T ss_pred CEEEEEEEEE---CCCCcccc-cceEEE--EECCCCCEEEEEeeec-CCCceecceeeCCCCccccceEEEEEec
Confidence 5677766543 35688855 445544 458853 233333 679999 99999997 79999999985
No 41
>2d7o_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=31.39 E-value=39 Score=22.86 Aligned_cols=25 Identities=20% Similarity=0.392 Sum_probs=21.0
Q ss_pred cCCceEEEEEecCCceeeeEEEEEee
Q psy3951 44 IAQGKYETVFKIPDVYGVYQFKVIYN 69 (132)
Q Consensus 44 ~~~g~y~~~FklPD~hGVf~F~v~Y~ 69 (132)
.++|+|.+.++ |..-|.|+..|.+.
T Consensus 61 ~~dGty~V~Y~-p~~~G~y~I~V~~~ 85 (111)
T 2d7o_A 61 NKDGTCTVSYL-PTAPGDYSIIVRFD 85 (111)
T ss_dssp CSSSEEEEEEC-CSSCEEEEEECBBS
T ss_pred CCCCEEEEEEE-eCCCeEEEEEEEEC
Confidence 46799999998 56679999999875
No 42
>2ovs_A L0044, ORF10; global regulator protein type three secretion system, gene regulation, ligand binding protein; HET: PG4; 1.90A {Escherichia coli} PDB: 3e3c_A*
Probab=30.86 E-value=28 Score=25.13 Aligned_cols=16 Identities=31% Similarity=0.573 Sum_probs=13.9
Q ss_pred CCceEEEEEecC-Ccee
Q psy3951 45 AQGKYETVFKIP-DVYG 60 (132)
Q Consensus 45 ~~g~y~~~FklP-D~hG 60 (132)
++|.|++.|+.| +..|
T Consensus 11 kDGiY~v~F~t~~~~~G 27 (118)
T 2ovs_A 11 KDGIYSIIFISNEDSCG 27 (118)
T ss_dssp CSEEEEEEEEETTCCEE
T ss_pred cCcEEEEEEECCCcCcc
Confidence 689999999999 6655
No 43
>2cov_D Beta-1,3-xylanase; carbohydrate-binding module, family 31 CBM, beta-1,3-xylanas binding protein; 1.25A {Alcaligenes SP}
Probab=30.81 E-value=1.4e+02 Score=20.97 Aligned_cols=60 Identities=22% Similarity=0.267 Sum_probs=36.6
Q ss_pred EEEEEeeCCeeEe---cc-cCCeEEEEEEeCeeEeeeeeccCCceEEEEEecCCceeeeEEEEEe
Q psy3951 8 LELERKSGNTWVP---HN-ANDVQMEFVRIDPFVRTTLKSIAQGKYETVFKIPDVYGVYQFKVIY 68 (132)
Q Consensus 8 i~i~e~~~~~WvP---f~-~dDiQlEf~mLDPy~R~~L~~~~~g~y~~~FklPD~hGVf~F~v~Y 68 (132)
|++..-++ .|.. |. -||.=|.=.+-.--.+.+....=+.+|+.+||+-|..|-=||.++=
T Consensus 23 ievfH~d~-gWsAgwnY~CLd~yCl~g~ks~g~f~r~F~a~LGqtY~i~FKVeD~~g~gQ~i~dk 86 (104)
T 2cov_D 23 IEVYHVDK-GWSAGWNYVCLNDYCLPGNKSNGAFRKTFNAVLGQDYKLTFKVEDRYGQGQQILDR 86 (104)
T ss_dssp EEEEEECC-CCCCSSEEEEETTEEEECEEETTEEEEEEECCTTCEEEEEEEEEETTTTEEEEEEE
T ss_pred EEEEEecC-CccceeeEEEecCeeccccccCCeeeeeechhcCcceeEEEEEecccCcceEEeee
Confidence 45554444 4654 22 2666555544443334444434456899999999999888887763
No 44
>2k7q_A Filamin-A; IG-like, ABP-280, actin binding protein, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; NMR {Homo sapiens}
Probab=30.80 E-value=69 Score=23.31 Aligned_cols=28 Identities=14% Similarity=0.400 Sum_probs=22.5
Q ss_pred eeccCCceEEEEEecCCceeeeEEEEEee
Q psy3951 41 LKSIAQGKYETVFKIPDVYGVYQFKVIYN 69 (132)
Q Consensus 41 L~~~~~g~y~~~FklPD~hGVf~F~v~Y~ 69 (132)
+...++|+|.++|+ |..-|.|...|.|+
T Consensus 144 v~d~~dGty~v~Y~-p~~~G~y~i~V~~~ 171 (191)
T 2k7q_A 144 TEDLEDGTCRVTYC-PTEPGNYIINIKFA 171 (191)
T ss_dssp EEECTTSCEEEEEE-ESSCEEEEEEEEET
T ss_pred EEECCCCEEEEEEE-eCCCceEEEEEEEC
Confidence 33357799999999 56779999999886
No 45
>2k7q_A Filamin-A; IG-like, ABP-280, actin binding protein, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; NMR {Homo sapiens}
Probab=29.98 E-value=84 Score=22.83 Aligned_cols=43 Identities=23% Similarity=0.237 Sum_probs=30.5
Q ss_pred EEEEEEeCeeEe---eeeeccCCceEEEEEecCCceeeeEEEEEeee
Q psy3951 27 QMEFVRIDPFVR---TTLKSIAQGKYETVFKIPDVYGVYQFKVIYNR 70 (132)
Q Consensus 27 QlEf~mLDPy~R---~~L~~~~~g~y~~~FklPD~hGVf~F~v~Y~R 70 (132)
.|+....+|--+ ..++..++|+|.+.|. |..-|.++..|.+.-
T Consensus 32 ~l~v~v~~PsG~~~~~~v~~~~~g~y~v~ft-P~~~G~~~i~V~~~g 77 (191)
T 2k7q_A 32 LLTATVVPPSGREEPCLLKRLRNGHVGISFV-PKETGEHLVHVKKNG 77 (191)
T ss_dssp SEEEEEECTTSCCEECEEEECTTSCEEEECC-CSSSEEEEEEEEETT
T ss_pred cEEEEEECCCCCEEeeEEEECCCCEEEEEEE-ccCCEeEEEEEEECC
Confidence 344555566522 2344457799999998 999999999998854
No 46
>2pn5_A TEP1R, thioester-containing protein I; FULL-length mature peptide, immune system; HET: NAG; 2.70A {Anopheles gambiae}
Probab=29.35 E-value=2.3e+02 Score=26.67 Aligned_cols=63 Identities=22% Similarity=0.314 Sum_probs=41.0
Q ss_pred CcEEEEEEEEEeeCCeeEecccC-CeEEEEEEeCeeE----eeeeeccCCceEEEEEecCCc--eeeeEEEEEee
Q psy3951 2 DNVVFRLELERKSGNTWVPHNAN-DVQMEFVRIDPFV----RTTLKSIAQGKYETVFKIPDV--YGVYQFKVIYN 69 (132)
Q Consensus 2 D~v~ysi~i~e~~~~~WvPf~~d-DiQlEf~mLDPy~----R~~L~~~~~g~y~~~FklPD~--hGVf~F~v~Y~ 69 (132)
|.|.|.+-+-. ....|-... .+.+| .+||=- |..+.....|.++.+|+||+. -|.|+.++.+.
T Consensus 115 qtV~~r~~~~~---~~~~p~~~~~~v~v~--l~dp~g~~i~~~~~~~~~~G~~~~~f~Lp~~~~~G~y~I~~~~~ 184 (1325)
T 2pn5_A 115 DTVNFRVIVLD---TELKPPARVKSVYVT--IRDPQRNVIRKWSTAKLYAGVFESDLQIAPTPMLGVWNISVEVE 184 (1325)
T ss_dssp CEEEEEEEEEE---TTSSCCSSCCEEEEE--EECTTCCEEEEEEEEECBTTEEEEEEECCSSCCCEEEEEEEEET
T ss_pred CEEEEEEEEec---CCccccccCccEEEE--EECCCCCEEEEEecccCCCCeEecceECCCCccccceEEEEEeC
Confidence 56777665543 224565432 24444 458853 222223467999999999997 79999999885
No 47
>2erj_C Cytokine receptor common gamma chain; immune system-cytok complex; HET: NAG FUC BMA; 3.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1
Probab=28.47 E-value=73 Score=24.03 Aligned_cols=43 Identities=14% Similarity=0.002 Sum_probs=35.0
Q ss_pred EEEeCeeEeeeeeccCCceEEEEEecCCceeeeEEEEEeeecc
Q psy3951 30 FVRIDPFVRTTLKSIAQGKYETVFKIPDVYGVYQFKVIYNRIG 72 (132)
Q Consensus 30 f~mLDPy~R~~L~~~~~g~y~~~FklPD~hGVf~F~v~Y~R~G 72 (132)
.++.||=.-+++...+.+....+-+.|......+|.|.|++.+
T Consensus 134 iVkP~PP~nl~v~~~~~~~l~l~W~~P~~~~~L~Yevry~~~~ 176 (247)
T 2erj_C 134 LVIPWAPENLTLHKLSESQLELNWNNRFLNHCLEHLVQYRTDW 176 (247)
T ss_dssp SEECCCCEEEEEEESSSSCEEEEEECSSCCTTEEEEEEEECSS
T ss_pred eEEeCCCCeEEEEECCCCcEEEEECCCCCCCcEEEEEEEeeCC
Confidence 4788888878887666688999999997667789999999864
No 48
>4fxk_A Complement C4 beta chain; immune system, proteolytic cascade; HET: NAG BMA; 3.60A {Homo sapiens} PDB: 4fxg_A*
Probab=27.61 E-value=2.7e+02 Score=23.32 Aligned_cols=62 Identities=13% Similarity=0.318 Sum_probs=41.6
Q ss_pred CcEEEEEEEEEeeCCeeEecccCCeEEEEEEeCeeE----eeeeeccCCceEEEEEecCCc--eeeeEEEEEeee
Q psy3951 2 DNVVFRLELERKSGNTWVPHNANDVQMEFVRIDPFV----RTTLKSIAQGKYETVFKIPDV--YGVYQFKVIYNR 70 (132)
Q Consensus 2 D~v~ysi~i~e~~~~~WvPf~~dDiQlEf~mLDPy~----R~~L~~~~~g~y~~~FklPD~--hGVf~F~v~Y~R 70 (132)
|.|.|.+-+- +....|.. + .+.+...||=- +..++ ..+|.++.+|+||+. -|.|+.++.+..
T Consensus 135 qtV~~r~i~~---d~~~~p~~-~--~~~v~i~dp~g~~v~~~~~~-~~~G~~~~~f~Lp~~~~~G~w~i~v~~~~ 202 (656)
T 4fxk_A 135 QRVRYRVFAL---DQKMRPST-D--TITVMVENSHGLRVRKKEVY-MPSSIFQDDFVIPDISEPGTWKISARFSD 202 (656)
T ss_dssp CEEEEEEEEE---CSSSSBCC-C--CEEEEEECTTCCEEEEEEEC-CTTSEEEEEEECCTTCCSEEEEEEEEESS
T ss_pred CEEEEEEEEE---CCccCcCc-c--cceEEEECCCCcEEeeeEEe-cCCceEEEEecCCCCCCCcCEEEEEEEcC
Confidence 5677776442 45566754 3 34555678833 33333 356999999999965 699999998854
No 49
>2b5i_C Cytokine receptor common gamma chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3bpl_C* 3qb7_C* 3qaz_C*
Probab=27.35 E-value=59 Score=23.09 Aligned_cols=42 Identities=14% Similarity=-0.014 Sum_probs=33.7
Q ss_pred EEeCeeEeeeeeccCCceEEEEEecCCceeeeEEEEEeeecc
Q psy3951 31 VRIDPFVRTTLKSIAQGKYETVFKIPDVYGVYQFKVIYNRIG 72 (132)
Q Consensus 31 ~mLDPy~R~~L~~~~~g~y~~~FklPD~hGVf~F~v~Y~R~G 72 (132)
++.||=.-+++...+.+....+-+.|...+..+|.|.|++.+
T Consensus 97 VkP~pP~~l~~~~~~~~~l~l~W~~p~~~~~l~yev~y~~~~ 138 (199)
T 2b5i_C 97 VIPWAPENLTLHKLSESQLELNWNNRFLNHCLEHLVQYRTDW 138 (199)
T ss_dssp EECCCCEEEEEEEEETTEEEEEEECSSCSTTCEEEEEEEETT
T ss_pred eecCCCcEEEEEECCCCCEEEEECCCCCCCceEEEEEEeecC
Confidence 678887777776555688999999997667789999999864
No 50
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=26.18 E-value=57 Score=20.70 Aligned_cols=22 Identities=23% Similarity=0.332 Sum_probs=17.8
Q ss_pred CceEEEEEecCCceeeeEEEEE
Q psy3951 46 QGKYETVFKIPDVYGVYQFKVI 67 (132)
Q Consensus 46 ~g~y~~~FklPD~hGVf~F~v~ 67 (132)
+.+++.+|++|++-|.|.|.-.
T Consensus 69 G~~~~~~f~~~~~~G~y~y~C~ 90 (105)
T 3cvb_A 69 GESYEITFSSDFPAGTYTYYCA 90 (105)
T ss_dssp TCEEEEEECTTSCSEEEEEECT
T ss_pred CCeEEEEEecCCCCeeEEEEeC
Confidence 4578889999999999988544
No 51
>1z0n_A 5'-AMP-activated protein kinase, beta-1 subunit; beta sandwich, sugar binding protein; HET: BCD; 1.49A {Rattus norvegicus} SCOP: b.1.18.21 PDB: 1z0m_A* 2f15_A
Probab=24.94 E-value=70 Score=21.15 Aligned_cols=22 Identities=23% Similarity=0.457 Sum_probs=15.4
Q ss_pred CceEEEEEecCCceeeeEEEEE
Q psy3951 46 QGKYETVFKIPDVYGVYQFKVI 67 (132)
Q Consensus 46 ~g~y~~~FklPD~hGVf~F~v~ 67 (132)
+|.+++...||.--=-|||.||
T Consensus 42 ~g~w~~~v~l~~G~~~YKf~Vd 63 (96)
T 1z0n_A 42 QNNFVAILDLPEGEHQYKFFVD 63 (96)
T ss_dssp TTEEEEEEEECSEEEEEEEEET
T ss_pred CCEEEEEEEccCCCEEEEEEEC
Confidence 4799998888772114888884
No 52
>4eiu_A Uncharacterized hypothetical protein; PF12866 family protein, DUF3823, structural genomics, joint for structural genomics, JCSG; HET: PGE; 1.90A {Bacteroides uniformis}
Probab=24.36 E-value=1.1e+02 Score=24.54 Aligned_cols=46 Identities=13% Similarity=0.431 Sum_probs=32.6
Q ss_pred EEEEEEEEeeCCeeEeccc----------CCeEEEE-------EEeCeeEeeeee--cc-CCceEEEEEe
Q psy3951 5 VFRLELERKSGNTWVPHNA----------NDVQMEF-------VRIDPFVRTTLK--SI-AQGKYETVFK 54 (132)
Q Consensus 5 ~ysi~i~e~~~~~WvPf~~----------dDiQlEf-------~mLDPy~R~~L~--~~-~~g~y~~~Fk 54 (132)
+|.|.+. |-|+|... |-|.+++ ..+-||+|+.-. +. ++++=.++||
T Consensus 70 ~Yki~~~----Gpf~p~~~~~~~~~~~~~dti~v~i~G~t~~DfeVtPY~~I~~~~~~~~~g~~v~asfk 135 (249)
T 4eiu_A 70 EYNVRID----GPFIPLVRENTDGTLLHDGSVNTEISGTTKVKFEVQPFLNVEFVGNPQVSNGVIKAQVR 135 (249)
T ss_dssp EEEEEEE----SSBCCSEEECTTSCEEEECCEEEEECSEEEEEEEECBSEEEEECSCCEEETTEEEEEEE
T ss_pred eeEEEeC----CCeeeeecccccccccCCceEEEEeCCcEEEeEEEeeeEEEecccceeccCCEEEEEEE
Confidence 5667765 88999872 2455555 467899999843 23 6788888988
No 53
>2nqc_A Filamin-C; immunoglobulin, metal binding, immune system; 2.05A {Homo sapiens} SCOP: b.1.18.10 PDB: 2d7q_A 2k3t_A
Probab=22.58 E-value=2e+02 Score=20.29 Aligned_cols=41 Identities=15% Similarity=0.256 Sum_probs=27.9
Q ss_pred EEEEEeCeeE-eeeeeccCCceEEEEEecCCceeeeEEEEEeee
Q psy3951 28 MEFVRIDPFV-RTTLKSIAQGKYETVFKIPDVYGVYQFKVIYNR 70 (132)
Q Consensus 28 lEf~mLDPy~-R~~L~~~~~g~y~~~FklPD~hGVf~F~v~Y~R 70 (132)
|+...-+|-- .+..+-.++| |.++++ |..-|.|+..|.|.-
T Consensus 78 l~v~I~gPs~~~~~~~d~~dG-y~V~Yt-P~~~G~y~I~Vk~~g 119 (138)
T 2nqc_A 78 LSVTIDGPSKVQLDCRECPEG-HVVTYT-PMAPGNYLIAIKYGG 119 (138)
T ss_dssp EEEEEESSSCCEEEEEEETTE-EEEEEE-CCSCEEEEEEEEESS
T ss_pred EEEEEECCCCCeeeEEECCCc-EEEEEE-cCCCEEEEEEEEECC
Confidence 3444455542 2233334678 999999 888899999998864
No 54
>1lqb_D HIF-1 alpha, hypoxia-inducible factor 1 alpha; protein-peptide complex, tumor suppressor, cancer, proteosomal degradation, ubiquitin; 2.00A {Homo sapiens}
Probab=22.23 E-value=11 Score=21.79 Aligned_cols=19 Identities=16% Similarity=0.642 Sum_probs=10.6
Q ss_pred ecccCCeEEEEEEeCeeEe
Q psy3951 20 PHNANDVQMEFVRIDPFVR 38 (132)
Q Consensus 20 Pf~~dDiQlEf~mLDPy~R 38 (132)
||..++--|.+-||-||+-
T Consensus 1 pF~~q~~dlDLemLAPYIp 19 (34)
T 1lqb_D 1 PFSTQDTDLDLEMLAPYIP 19 (34)
T ss_pred CcccccccccHhHhcCccc
Confidence 4443333455567777765
No 55
>2j3s_A Filamin-A; cytoskeleton, phosphorylation, structural protein; 2.5A {Homo sapiens} SCOP: b.1.18.10 b.1.18.10 PDB: 2e9i_A
Probab=21.80 E-value=1.3e+02 Score=23.20 Aligned_cols=25 Identities=16% Similarity=0.442 Sum_probs=21.7
Q ss_pred cCCceEEEEEecCCceeeeEEEEEee
Q psy3951 44 IAQGKYETVFKIPDVYGVYQFKVIYN 69 (132)
Q Consensus 44 ~~~g~y~~~FklPD~hGVf~F~v~Y~ 69 (132)
.++|+|.++|+ |..-|.|+..|.+.
T Consensus 56 ~~dGty~v~y~-p~~~G~y~i~V~~~ 80 (288)
T 2j3s_A 56 LEDGTCRVTYC-PTEPGNYIINIKFA 80 (288)
T ss_dssp CTTSEEEEEEE-CSSCEEEEEEEEET
T ss_pred CCCCEEEEEEE-CCCCeEEEEEEEEC
Confidence 57799999999 56779999999886
No 56
>2j3s_A Filamin-A; cytoskeleton, phosphorylation, structural protein; 2.5A {Homo sapiens} SCOP: b.1.18.10 b.1.18.10 PDB: 2e9i_A
Probab=21.43 E-value=1.3e+02 Score=23.16 Aligned_cols=29 Identities=17% Similarity=0.332 Sum_probs=23.1
Q ss_pred eeccCCceEEEEEecCCceeeeEEEEEeee
Q psy3951 41 LKSIAQGKYETVFKIPDVYGVYQFKVIYNR 70 (132)
Q Consensus 41 L~~~~~g~y~~~FklPD~hGVf~F~v~Y~R 70 (132)
+...++|+|.++++ |..-|.|+..|.|+.
T Consensus 244 ~~d~~dGt~~v~y~-p~~~G~y~i~V~~~~ 272 (288)
T 2j3s_A 244 FEDRKDGSCGVAYV-VQEPGDYEVSVKFNE 272 (288)
T ss_dssp EEECTTSEEEEEEE-ESSCEEEEEEEEETT
T ss_pred EEECCCCEEEEEEE-cCCCeeEEEEEEECC
Confidence 33357899999999 566799999998864
No 57
>2c9r_A COPC, copper resistance protein C; copper transport, copper proteins, copper dissociation const metal-binding, electron transport; 2.0A {Pseudomonas syringae PV} PDB: 1m42_A 1nm4_A 1ot4_A 2c9p_A 2c9q_A
Probab=20.69 E-value=1.3e+02 Score=20.16 Aligned_cols=31 Identities=29% Similarity=0.479 Sum_probs=21.5
Q ss_pred EeeeeeccCCceEEEEEecC--C---ceeeeEEEEE
Q psy3951 37 VRTTLKSIAQGKYETVFKIP--D---VYGVYQFKVI 67 (132)
Q Consensus 37 ~R~~L~~~~~g~y~~~FklP--D---~hGVf~F~v~ 67 (132)
+++.|.+...|+|++..++= | .-|.|+|.|.
T Consensus 67 ~~~~l~~L~~G~YtV~WrvvS~DGH~~~G~~~FtV~ 102 (102)
T 2c9r_A 67 VITPASPLTAGTYKVDWRAVSSDTFPITGSVTFKVK 102 (102)
T ss_dssp EEEESSCCCSEEEEEEEEECCTTCCCEEEEEEEEEC
T ss_pred EEEECCCCCCceEEEEEEEEecCCCccCCEEEEEEC
Confidence 34445556789999988874 3 3488888873
No 58
>2eec_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.49 E-value=2e+02 Score=19.72 Aligned_cols=25 Identities=28% Similarity=0.608 Sum_probs=21.2
Q ss_pred cCCceEEEEEecCCceeeeEEEEEeee
Q psy3951 44 IAQGKYETVFKIPDVYGVYQFKVIYNR 70 (132)
Q Consensus 44 ~~~g~y~~~FklPD~hGVf~F~v~Y~R 70 (132)
.++| |.++++ |..-|.|+..|.|.-
T Consensus 71 ~~dG-y~V~Y~-P~~~G~y~I~V~~~g 95 (125)
T 2eec_A 71 TPEG-YKVMYT-PMAPGNYLISVKYGG 95 (125)
T ss_dssp CSSS-EEEEEC-CSSCEEEEEEEEESS
T ss_pred CCCC-EEEEEE-cCCCeEEEEEEEECC
Confidence 4678 999999 677899999999875
No 59
>3nme_A Ptpkis1 protein, SEX4 glucan phosphatase; dual specificity phosphatase, carbohydrate BIND hydrolase; 2.40A {Arabidopsis thaliana}
Probab=20.19 E-value=1.1e+02 Score=24.11 Aligned_cols=30 Identities=17% Similarity=0.163 Sum_probs=20.9
Q ss_pred eeeeecc-CCceEEEEEecCCceeeeEEEEE
Q psy3951 38 RTTLKSI-AQGKYETVFKIPDVYGVYQFKVI 67 (132)
Q Consensus 38 R~~L~~~-~~g~y~~~FklPD~hGVf~F~v~ 67 (132)
++.|+.. ++|.|+++..||.--=-|+|.||
T Consensus 196 ~~~l~k~~~~g~~~~~~~L~~G~y~YkFiVD 226 (294)
T 3nme_A 196 RIPLTLGKGTGFWILKRELPEGQFEYKYIID 226 (294)
T ss_dssp EEECEECTTTCEEEEEEEECSEEEEEEEEET
T ss_pred cccceEcCCCCEEEEEEECCCceEEEEEEEC
Confidence 5667665 47999999999984333555565
No 60
>1lyq_A PCOC copper resistance protein; beta barrel, IG domain, metal binding protein; 1.50A {Escherichia coli} SCOP: b.1.18.17 PDB: 1ix2_A
Probab=20.17 E-value=1.4e+02 Score=20.20 Aligned_cols=31 Identities=26% Similarity=0.485 Sum_probs=21.3
Q ss_pred EeeeeeccCCceEEEEEecC--C---ceeeeEEEEE
Q psy3951 37 VRTTLKSIAQGKYETVFKIP--D---VYGVYQFKVI 67 (132)
Q Consensus 37 ~R~~L~~~~~g~y~~~FklP--D---~hGVf~F~v~ 67 (132)
+++.|.+...|+|++..++= | .-|.|+|.|.
T Consensus 69 ~~~~l~~L~~G~YtV~WrvvS~DGH~~~G~~~FtV~ 104 (104)
T 1lyq_A 69 VIIPREPLPAGTYRVDWRAVSSDTHPITGNYTFTVK 104 (104)
T ss_dssp EEEESSCCCSEEEEEEEEECCTTSCCEEEEEEEEEC
T ss_pred EEEECCCCCCceEEEEEEEEecCCCccCCEEEEEEC
Confidence 34445556789999988874 4 3488888873
Done!