Query psy3952
Match_columns 252
No_of_seqs 141 out of 1279
Neff 9.1
Searched_HMMs 29240
Date Fri Aug 16 21:34:12 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3952.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/3952hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dme_A Conserved exported prot 100.0 8.2E-28 2.8E-32 209.3 19.3 201 2-241 157-368 (369)
2 3nyc_A D-arginine dehydrogenas 99.9 3.5E-26 1.2E-30 200.1 19.8 195 1-243 160-358 (381)
3 1y56_B Sarcosine oxidase; dehy 99.9 1.8E-24 6.3E-29 189.8 18.8 194 2-243 156-355 (382)
4 2gf3_A MSOX, monomeric sarcosi 99.9 3.1E-24 1.1E-28 188.5 16.0 200 2-243 157-364 (389)
5 3axb_A Putative oxidoreductase 99.9 5.2E-24 1.8E-28 191.0 17.6 200 2-243 188-418 (448)
6 3da1_A Glycerol-3-phosphate de 99.9 2E-23 6.9E-28 192.4 20.3 206 2-247 177-395 (561)
7 2uzz_A N-methyl-L-tryptophan o 99.9 3.2E-23 1.1E-27 181.1 18.9 195 2-243 156-357 (372)
8 1ryi_A Glycine oxidase; flavop 99.9 5.2E-23 1.8E-27 180.4 17.2 189 2-243 171-362 (382)
9 2oln_A NIKD protein; flavoprot 99.9 3.4E-22 1.1E-26 176.4 21.2 201 2-243 160-374 (397)
10 2gag_B Heterotetrameric sarcos 99.9 2.1E-22 7.3E-27 177.7 19.4 192 2-243 181-375 (405)
11 3pvc_A TRNA 5-methylaminomethy 99.9 6.3E-23 2.2E-27 193.4 14.8 192 2-243 419-649 (689)
12 3ps9_A TRNA 5-methylaminomethy 99.9 8.1E-23 2.8E-27 192.3 15.3 192 2-243 424-645 (676)
13 2qcu_A Aerobic glycerol-3-phos 99.9 8.1E-22 2.8E-26 179.5 21.3 201 1-244 155-373 (501)
14 3g3e_A D-amino-acid oxidase; F 99.9 1E-23 3.4E-28 183.3 7.7 190 1-250 148-340 (351)
15 2rgh_A Alpha-glycerophosphate 99.9 8.7E-22 3E-26 181.9 19.7 202 2-244 195-412 (571)
16 3dje_A Fructosyl amine: oxygen 99.9 2.6E-22 8.7E-27 179.4 14.0 205 1-244 167-385 (438)
17 3c4n_A Uncharacterized protein 99.9 4.2E-22 1.4E-26 176.7 12.1 199 2-243 179-397 (405)
18 1c0p_A D-amino acid oxidase; a 99.9 8.2E-22 2.8E-26 172.0 11.2 183 1-244 148-358 (363)
19 1pj5_A N,N-dimethylglycine oxi 99.8 4.4E-20 1.5E-24 177.4 20.4 213 1-243 157-379 (830)
20 3cgv_A Geranylgeranyl reductas 98.9 2.2E-08 7.5E-13 87.4 13.1 198 2-244 109-315 (397)
21 3nix_A Flavoprotein/dehydrogen 98.6 1.2E-07 4E-12 83.6 8.2 59 2-61 113-175 (421)
22 3atr_A Conserved archaeal prot 98.3 3E-05 1E-09 69.1 16.4 58 2-60 107-170 (453)
23 3fmw_A Oxygenase; mithramycin, 98.2 8.6E-06 2.9E-10 74.9 10.4 59 2-61 155-216 (570)
24 3v76_A Flavoprotein; structura 98.1 3.9E-06 1.3E-10 74.3 7.5 58 2-60 139-206 (417)
25 3oz2_A Digeranylgeranylglycero 98.1 2.4E-05 8.2E-10 67.6 11.0 58 2-60 109-170 (397)
26 2weu_A Tryptophan 5-halogenase 98.1 2.5E-05 8.4E-10 70.7 11.0 58 2-60 180-239 (511)
27 2i0z_A NAD(FAD)-utilizing dehy 98.0 9.6E-06 3.3E-10 72.3 8.1 60 2-61 141-211 (447)
28 2qa2_A CABE, polyketide oxygen 98.0 0.00019 6.5E-09 64.9 16.3 58 2-60 114-174 (499)
29 3i3l_A Alkylhalidase CMLS; fla 98.0 6.1E-05 2.1E-09 69.6 13.2 58 2-60 135-196 (591)
30 3i6d_A Protoporphyrinogen oxid 98.0 6.2E-05 2.1E-09 66.8 12.0 67 10-78 248-320 (470)
31 2gqf_A Hypothetical protein HI 98.0 1.3E-05 4.4E-10 70.5 7.3 59 2-61 116-188 (401)
32 4dgk_A Phytoene dehydrogenase; 97.8 2.3E-05 7.8E-10 70.5 6.6 51 1-51 227-278 (501)
33 3ihg_A RDME; flavoenzyme, anth 97.8 4.6E-05 1.6E-09 69.4 8.4 59 2-61 127-192 (535)
34 3lov_A Protoporphyrinogen oxid 97.7 0.00027 9.4E-09 63.0 12.1 66 10-78 249-319 (475)
35 2x3n_A Probable FAD-dependent 97.7 4.7E-05 1.6E-09 66.4 6.6 59 2-61 114-175 (399)
36 2ywl_A Thioredoxin reductase r 97.7 6.1E-05 2.1E-09 58.2 6.5 55 3-60 64-118 (180)
37 3ka7_A Oxidoreductase; structu 97.7 3.5E-05 1.2E-09 67.6 5.6 51 1-52 202-253 (425)
38 3nrn_A Uncharacterized protein 97.7 2.7E-05 9.4E-10 68.5 4.9 54 2-59 196-249 (421)
39 3nlc_A Uncharacterized protein 97.7 0.0001 3.6E-09 67.3 8.6 59 2-60 227-289 (549)
40 2qa1_A PGAE, polyketide oxygen 97.7 0.00015 5.1E-09 65.5 9.0 59 2-61 113-174 (500)
41 2bcg_G Secretory pathway GDP d 97.5 6.8E-05 2.3E-09 66.9 4.4 53 1-54 248-303 (453)
42 3rp8_A Flavoprotein monooxygen 97.5 0.00084 2.9E-08 58.6 11.1 55 3-60 135-190 (407)
43 3p1w_A Rabgdi protein; GDI RAB 97.4 0.00015 5.3E-09 65.0 5.3 50 1-50 262-313 (475)
44 4a9w_A Monooxygenase; baeyer-v 97.4 0.00019 6.4E-09 61.0 5.7 50 3-53 84-134 (357)
45 3nks_A Protoporphyrinogen oxid 97.4 0.00011 3.8E-09 65.5 4.3 49 2-51 241-290 (477)
46 1rp0_A ARA6, thiazole biosynth 97.3 0.00039 1.3E-08 58.0 6.7 69 3-73 127-217 (284)
47 2vvm_A Monoamine oxidase N; FA 97.3 0.00027 9.2E-09 63.4 5.9 50 2-51 262-312 (495)
48 2v3a_A Rubredoxin reductase; a 97.3 0.00036 1.2E-08 60.7 6.5 58 3-60 195-253 (384)
49 3d1c_A Flavin-containing putat 97.3 0.00036 1.2E-08 59.8 6.1 49 3-52 96-144 (369)
50 2e4g_A Tryptophan halogenase; 97.3 0.00016 5.5E-09 66.1 4.0 58 2-60 201-261 (550)
51 1d5t_A Guanine nucleotide diss 97.3 0.00011 3.7E-09 65.2 2.7 52 2-54 241-293 (433)
52 2cul_A Glucose-inhibited divis 97.1 0.00068 2.3E-08 54.7 6.1 50 3-53 76-127 (232)
53 3lxd_A FAD-dependent pyridine 97.1 0.001 3.5E-08 58.4 7.6 58 3-60 202-261 (415)
54 1mo9_A ORF3; nucleotide bindin 97.1 0.00057 2E-08 62.0 5.8 59 2-60 262-327 (523)
55 3iwa_A FAD-dependent pyridine 97.0 0.00092 3.2E-08 59.7 6.6 58 3-60 210-268 (472)
56 3fg2_P Putative rubredoxin red 97.0 0.00095 3.2E-08 58.4 6.6 58 3-60 192-251 (404)
57 2aqj_A Tryptophan halogenase, 97.0 0.00037 1.3E-08 63.4 4.0 58 2-60 172-231 (538)
58 3e1t_A Halogenase; flavoprotei 97.0 0.00091 3.1E-08 60.5 6.5 58 2-60 118-180 (512)
59 1y56_A Hypothetical protein PH 96.9 0.0011 3.8E-08 59.7 6.2 58 3-60 265-323 (493)
60 2pyx_A Tryptophan halogenase; 96.9 0.00052 1.8E-08 62.3 4.1 58 2-60 182-242 (526)
61 3alj_A 2-methyl-3-hydroxypyrid 96.9 0.0012 4.1E-08 57.1 6.2 55 2-60 114-168 (379)
62 1qo8_A Flavocytochrome C3 fuma 96.9 0.0011 3.8E-08 60.7 6.2 51 2-52 257-313 (566)
63 3k7m_X 6-hydroxy-L-nicotine ox 96.9 0.00082 2.8E-08 59.0 5.1 46 5-51 214-259 (431)
64 4at0_A 3-ketosteroid-delta4-5a 96.9 0.001 3.5E-08 60.2 5.8 51 2-52 209-265 (510)
65 1y0p_A Fumarate reductase flav 96.9 0.0015 5.3E-08 59.8 6.9 51 2-52 262-318 (571)
66 3qj4_A Renalase; FAD/NAD(P)-bi 96.9 0.0012 4.2E-08 56.1 5.7 45 5-49 119-163 (342)
67 1xdi_A RV3303C-LPDA; reductase 96.9 0.0012 4E-08 59.5 5.6 51 3-53 231-281 (499)
68 1k0i_A P-hydroxybenzoate hydro 96.9 0.0013 4.3E-08 57.1 5.6 58 2-60 110-171 (394)
69 1yvv_A Amine oxidase, flavin-c 96.9 0.0012 4E-08 55.8 5.3 44 8-51 118-162 (336)
70 1d4d_A Flavocytochrome C fumar 96.8 0.0022 7.4E-08 58.9 7.0 51 2-52 262-318 (572)
71 2gmh_A Electron transfer flavo 96.8 0.0032 1.1E-07 57.9 8.1 60 1-60 150-229 (584)
72 2zbw_A Thioredoxin reductase; 96.8 0.0023 7.8E-08 54.0 6.5 49 3-51 73-121 (335)
73 3ef6_A Toluene 1,2-dioxygenase 96.8 0.0018 6E-08 56.8 5.8 58 3-60 193-251 (410)
74 1b37_A Protein (polyamine oxid 96.7 0.00091 3.1E-08 59.7 4.0 43 9-51 228-270 (472)
75 2r0c_A REBC; flavin adenine di 96.7 0.0029 9.9E-08 57.7 7.2 55 3-61 146-205 (549)
76 1m6i_A Programmed cell death p 96.7 0.0018 6.2E-08 58.3 5.6 58 3-60 234-292 (493)
77 3gwf_A Cyclohexanone monooxyge 96.7 0.0021 7.2E-08 58.6 6.0 50 3-52 95-148 (540)
78 3o0h_A Glutathione reductase; 96.6 0.0026 8.9E-08 57.0 6.1 58 3-60 240-300 (484)
79 2gv8_A Monooxygenase; FMO, FAD 96.6 0.0018 6.2E-08 57.4 4.9 49 4-52 124-178 (447)
80 1zk7_A HGII, reductase, mercur 96.6 0.002 6.9E-08 57.4 5.3 49 3-52 224-272 (467)
81 2yqu_A 2-oxoglutarate dehydrog 96.6 0.0022 7.6E-08 56.9 5.4 51 3-53 216-266 (455)
82 2dkh_A 3-hydroxybenzoate hydro 96.6 0.0028 9.6E-08 58.9 6.3 58 2-60 148-219 (639)
83 2vou_A 2,6-dihydroxypyridine h 96.6 0.0028 9.4E-08 55.2 5.9 51 8-59 110-160 (397)
84 1s3e_A Amine oxidase [flavin-c 96.6 0.0022 7.5E-08 57.9 5.2 47 5-51 222-268 (520)
85 1fec_A Trypanothione reductase 96.5 0.0025 8.6E-08 57.3 5.4 58 3-60 239-300 (490)
86 3f8d_A Thioredoxin reductase ( 96.5 0.0029 1E-07 52.7 5.4 48 3-51 78-125 (323)
87 1q1r_A Putidaredoxin reductase 96.5 0.0045 1.5E-07 54.6 6.7 58 3-60 199-260 (431)
88 2xdo_A TETX2 protein; tetracyc 96.5 0.0022 7.6E-08 55.8 4.6 44 9-52 140-183 (398)
89 2q0l_A TRXR, thioredoxin reduc 96.5 0.0034 1.2E-07 52.3 5.5 48 3-51 67-114 (311)
90 3lzw_A Ferredoxin--NADP reduct 96.5 0.0037 1.3E-07 52.4 5.7 47 3-50 75-122 (332)
91 2wdq_A Succinate dehydrogenase 96.5 0.0048 1.6E-07 56.8 6.8 52 2-53 150-208 (588)
92 3ab1_A Ferredoxin--NADP reduct 96.4 0.0052 1.8E-07 52.5 6.5 49 3-51 82-131 (360)
93 4ap3_A Steroid monooxygenase; 96.4 0.0032 1.1E-07 57.5 5.4 49 4-52 108-160 (549)
94 2yg5_A Putrescine oxidase; oxi 96.4 0.0026 8.8E-08 56.2 4.6 46 5-51 222-268 (453)
95 4dna_A Probable glutathione re 96.4 0.0031 1E-07 56.2 5.1 57 3-60 219-280 (463)
96 2b9w_A Putative aminooxidase; 96.4 0.0026 8.9E-08 55.7 4.4 46 5-51 213-258 (424)
97 3oc4_A Oxidoreductase, pyridin 96.4 0.0053 1.8E-07 54.4 6.4 49 3-52 197-245 (452)
98 2bs2_A Quinol-fumarate reducta 96.3 0.0051 1.7E-07 57.4 6.3 51 2-52 165-221 (660)
99 2h88_A Succinate dehydrogenase 96.3 0.0059 2E-07 56.6 6.5 51 2-52 162-218 (621)
100 1vdc_A NTR, NADPH dependent th 96.3 0.0029 9.8E-08 53.3 4.0 48 3-52 78-125 (333)
101 1fl2_A Alkyl hydroperoxide red 96.3 0.0045 1.5E-07 51.6 5.1 49 3-51 64-115 (310)
102 2ivd_A PPO, PPOX, protoporphyr 96.2 0.0018 6.3E-08 57.6 2.7 47 5-51 245-294 (478)
103 2jbv_A Choline oxidase; alcoho 96.2 0.0045 1.5E-07 56.5 5.0 54 7-60 221-283 (546)
104 3ntd_A FAD-dependent pyridine 96.2 0.0093 3.2E-07 54.3 7.1 58 3-60 200-277 (565)
105 3ces_A MNMG, tRNA uridine 5-ca 96.2 0.0057 1.9E-07 56.8 5.7 48 3-51 132-181 (651)
106 2zxi_A TRNA uridine 5-carboxym 96.2 0.0074 2.5E-07 55.9 6.3 48 3-51 131-180 (637)
107 2bry_A NEDD9 interacting prote 96.1 0.0039 1.3E-07 56.2 4.1 51 2-52 173-231 (497)
108 2r9z_A Glutathione amide reduc 96.1 0.0099 3.4E-07 52.9 6.7 58 3-60 215-276 (463)
109 2xve_A Flavin-containing monoo 96.1 0.0051 1.7E-07 54.9 4.8 50 4-53 110-168 (464)
110 1w4x_A Phenylacetone monooxyge 96.1 0.0072 2.5E-07 55.0 5.8 49 5-53 104-156 (542)
111 1n4w_A CHOD, cholesterol oxida 96.1 0.0047 1.6E-07 55.7 4.6 57 3-59 229-297 (504)
112 1kf6_A Fumarate reductase flav 96.1 0.0088 3E-07 55.2 6.3 52 2-53 141-199 (602)
113 3cp8_A TRNA uridine 5-carboxym 96.1 0.0085 2.9E-07 55.6 6.1 49 3-52 125-175 (641)
114 2e5v_A L-aspartate oxidase; ar 96.0 0.0035 1.2E-07 56.1 3.5 50 2-53 126-178 (472)
115 1coy_A Cholesterol oxidase; ox 96.0 0.005 1.7E-07 55.6 4.4 57 3-59 234-302 (507)
116 1ges_A Glutathione reductase; 96.0 0.01 3.5E-07 52.6 6.2 58 3-60 216-277 (450)
117 1kdg_A CDH, cellobiose dehydro 96.0 0.0078 2.7E-07 54.7 5.5 58 3-60 203-271 (546)
118 2wpf_A Trypanothione reductase 95.9 0.013 4.6E-07 52.6 6.8 58 3-60 243-304 (495)
119 1chu_A Protein (L-aspartate ox 95.9 0.014 4.9E-07 53.1 7.0 52 1-52 144-209 (540)
120 3uox_A Otemo; baeyer-villiger 95.9 0.0063 2.2E-07 55.5 4.6 50 4-53 96-149 (545)
121 2gqw_A Ferredoxin reductase; f 95.9 0.014 4.6E-07 51.1 6.5 54 3-60 195-249 (408)
122 3c96_A Flavin-containing monoo 95.8 0.0067 2.3E-07 52.9 4.3 56 3-60 115-177 (410)
123 3fbs_A Oxidoreductase; structu 95.8 0.012 4E-07 48.4 5.6 47 4-51 65-112 (297)
124 3cty_A Thioredoxin reductase; 95.8 0.01 3.5E-07 49.7 5.1 48 3-52 80-127 (319)
125 1ju2_A HydroxynitrIle lyase; f 95.7 0.01 3.5E-07 54.0 5.2 58 3-60 202-271 (536)
126 4gut_A Lysine-specific histone 95.7 0.014 4.8E-07 55.5 6.1 45 6-50 540-584 (776)
127 3cgb_A Pyridine nucleotide-dis 95.7 0.012 4.1E-07 52.6 5.5 57 3-60 235-292 (480)
128 1hyu_A AHPF, alkyl hydroperoxi 95.6 0.011 3.9E-07 53.4 5.1 50 3-52 275-327 (521)
129 2hqm_A GR, grase, glutathione 95.6 0.016 5.5E-07 51.8 6.0 58 3-60 234-296 (479)
130 2q7v_A Thioredoxin reductase; 95.6 0.012 4.2E-07 49.3 4.9 48 3-51 73-123 (325)
131 2jae_A L-amino acid oxidase; o 95.5 0.0091 3.1E-07 53.3 4.0 47 5-51 246-296 (489)
132 1jnr_A Adenylylsulfate reducta 95.4 0.02 6.8E-07 53.3 6.0 50 3-52 159-219 (643)
133 2eq6_A Pyruvate dehydrogenase 95.4 0.025 8.7E-07 50.2 6.4 50 3-52 218-272 (464)
134 2cdu_A NADPH oxidase; flavoenz 95.3 0.033 1.1E-06 49.2 6.9 49 3-52 199-248 (452)
135 2qae_A Lipoamide, dihydrolipoy 95.3 0.025 8.6E-07 50.2 6.0 58 3-60 223-288 (468)
136 1onf_A GR, grase, glutathione 95.3 0.03 1E-06 50.3 6.5 51 3-53 225-277 (500)
137 3itj_A Thioredoxin reductase 1 95.3 0.019 6.5E-07 48.1 4.9 48 3-51 92-142 (338)
138 1zmd_A Dihydrolipoyl dehydroge 95.2 0.029 9.8E-07 49.9 6.3 58 3-60 228-294 (474)
139 3klj_A NAD(FAD)-dependent dehy 95.2 0.036 1.2E-06 48.1 6.7 46 3-50 70-115 (385)
140 3s5w_A L-ornithine 5-monooxyge 95.2 0.017 5.7E-07 51.2 4.6 46 4-49 136-190 (463)
141 1vg0_A RAB proteins geranylger 95.2 0.029 9.9E-07 52.1 6.2 49 1-49 384-435 (650)
142 1rsg_A FMS1 protein; FAD bindi 95.2 0.014 4.9E-07 52.5 4.1 43 10-52 215-258 (516)
143 2a87_A TRXR, TR, thioredoxin r 95.1 0.019 6.4E-07 48.4 4.6 47 3-51 79-126 (335)
144 3ics_A Coenzyme A-disulfide re 95.0 0.027 9.3E-07 51.6 5.4 56 3-60 236-292 (588)
145 1ojt_A Surface protein; redox- 94.8 0.028 9.5E-07 50.2 5.0 58 3-60 234-298 (482)
146 3f8d_A Thioredoxin reductase ( 94.8 0.048 1.6E-06 45.2 6.2 57 4-60 198-261 (323)
147 1trb_A Thioredoxin reductase; 94.8 0.027 9.1E-07 46.9 4.6 47 3-51 70-116 (320)
148 1ebd_A E3BD, dihydrolipoamide 94.7 0.036 1.2E-06 49.1 5.4 50 3-52 219-271 (455)
149 3lad_A Dihydrolipoamide dehydr 94.7 0.049 1.7E-06 48.4 6.2 50 3-52 229-281 (476)
150 1nhp_A NADH peroxidase; oxidor 94.6 0.042 1.4E-06 48.4 5.6 49 3-52 199-247 (447)
151 1v59_A Dihydrolipoamide dehydr 94.6 0.042 1.4E-06 48.9 5.5 51 3-53 232-289 (478)
152 3ab1_A Ferredoxin--NADP reduct 94.5 0.073 2.5E-06 45.2 6.7 58 3-60 210-273 (360)
153 2a8x_A Dihydrolipoyl dehydroge 94.5 0.05 1.7E-06 48.2 5.8 58 3-60 220-283 (464)
154 3vrd_B FCCB subunit, flavocyto 94.5 0.027 9.1E-07 48.8 3.9 57 4-60 211-267 (401)
155 2iid_A L-amino-acid oxidase; f 94.4 0.039 1.3E-06 49.2 4.9 46 6-51 249-298 (498)
156 3qvp_A Glucose oxidase; oxidor 94.4 0.074 2.5E-06 48.8 6.7 55 6-60 238-303 (583)
157 1trb_A Thioredoxin reductase; 94.2 0.084 2.9E-06 43.8 6.4 50 3-52 192-248 (320)
158 3s5w_A L-ornithine 5-monooxyge 94.2 0.068 2.3E-06 47.1 6.0 45 8-52 329-378 (463)
159 3h8l_A NADH oxidase; membrane 94.2 0.036 1.2E-06 48.2 4.0 52 3-58 226-277 (409)
160 4b1b_A TRXR, thioredoxin reduc 94.1 0.098 3.4E-06 47.6 6.9 50 2-51 270-319 (542)
161 3urh_A Dihydrolipoyl dehydroge 94.0 0.068 2.3E-06 47.7 5.6 50 3-52 247-301 (491)
162 1dxl_A Dihydrolipoamide dehydr 93.9 0.054 1.9E-06 48.0 4.7 50 3-52 226-280 (470)
163 3gyx_A Adenylylsulfate reducta 93.9 0.043 1.5E-06 51.2 4.1 51 2-52 173-234 (662)
164 1q1r_A Putidaredoxin reductase 93.8 0.11 3.7E-06 45.7 6.4 47 3-51 68-114 (431)
165 4hb9_A Similarities with proba 93.7 0.1 3.5E-06 44.7 6.1 53 7-60 121-174 (412)
166 3itj_A Thioredoxin reductase 1 93.7 0.081 2.8E-06 44.1 5.2 50 3-52 216-272 (338)
167 3k30_A Histamine dehydrogenase 93.5 0.032 1.1E-06 52.3 2.6 48 3-52 575-625 (690)
168 1gpe_A Protein (glucose oxidas 93.5 0.085 2.9E-06 48.4 5.4 56 5-60 241-307 (587)
169 2bc0_A NADH oxidase; flavoprot 93.3 0.1 3.5E-06 46.6 5.6 49 3-51 100-149 (490)
170 1lvl_A Dihydrolipoamide dehydr 93.2 0.071 2.4E-06 47.2 4.3 48 3-52 220-269 (458)
171 2z3y_A Lysine-specific histone 93.1 0.077 2.6E-06 49.4 4.6 44 8-51 409-458 (662)
172 2zbw_A Thioredoxin reductase; 93.1 0.16 5.5E-06 42.4 6.2 57 4-60 200-262 (335)
173 3dgh_A TRXR-1, thioredoxin red 93.1 0.12 3.9E-06 46.1 5.5 49 3-51 235-289 (483)
174 2bc0_A NADH oxidase; flavoprot 93.0 0.14 4.7E-06 45.8 5.9 48 3-52 244-292 (490)
175 3jsk_A Cypbp37 protein; octame 93.0 0.15 5.1E-06 43.6 5.7 51 2-52 167-252 (344)
176 3lzw_A Ferredoxin--NADP reduct 92.9 0.12 4E-06 43.0 5.0 58 3-60 197-260 (332)
177 3dk9_A Grase, GR, glutathione 92.8 0.16 5.4E-06 45.1 6.0 50 3-52 236-294 (478)
178 3sx6_A Sulfide-quinone reducta 92.8 0.21 7.1E-06 43.8 6.7 48 2-52 66-113 (437)
179 3hyw_A Sulfide-quinone reducta 92.8 0.15 5.2E-06 44.7 5.7 44 4-50 65-108 (430)
180 1nhp_A NADH peroxidase; oxidor 92.7 0.23 7.8E-06 43.7 6.8 49 3-51 64-115 (447)
181 3d1c_A Flavin-containing putat 92.7 0.14 4.8E-06 43.4 5.2 49 5-53 224-274 (369)
182 3r9u_A Thioredoxin reductase; 92.6 0.2 6.8E-06 41.2 6.0 48 5-52 193-245 (315)
183 1xhc_A NADH oxidase /nitrite r 92.6 0.069 2.4E-06 45.9 3.2 53 3-60 191-244 (367)
184 3oc4_A Oxidoreductase, pyridin 92.6 0.17 5.8E-06 44.6 5.9 49 3-51 66-115 (452)
185 3cty_A Thioredoxin reductase; 92.6 0.16 5.5E-06 42.2 5.4 57 3-59 198-261 (319)
186 1pn0_A Phenol 2-monooxygenase; 92.5 0.31 1E-05 45.4 7.6 58 2-60 126-238 (665)
187 4fk1_A Putative thioredoxin re 92.5 0.2 6.8E-06 41.5 5.8 46 5-50 70-116 (304)
188 3ef6_A Toluene 1,2-dioxygenase 92.1 0.29 1E-05 42.5 6.7 45 4-50 66-110 (410)
189 2cdu_A NADPH oxidase; flavoenz 92.1 0.26 8.8E-06 43.4 6.4 49 3-51 66-117 (452)
190 4gde_A UDP-galactopyranose mut 92.0 0.065 2.2E-06 47.7 2.4 53 2-58 229-281 (513)
191 3kd9_A Coenzyme A disulfide re 92.0 0.19 6.6E-06 44.2 5.4 56 3-60 198-254 (449)
192 2gjc_A Thiazole biosynthetic e 92.0 0.24 8E-06 42.0 5.7 49 3-51 154-239 (326)
193 3fbs_A Oxidoreductase; structu 92.0 0.16 5.4E-06 41.5 4.6 54 3-60 182-236 (297)
194 3cgb_A Pyridine nucleotide-dis 92.0 0.35 1.2E-05 43.0 7.1 46 6-51 104-152 (480)
195 1sez_A Protoporphyrinogen oxid 91.8 0.11 3.8E-06 46.2 3.7 47 5-51 250-308 (504)
196 2gqw_A Ferredoxin reductase; f 91.8 0.18 6.2E-06 43.8 5.0 45 5-51 69-113 (408)
197 2xag_A Lysine-specific histone 91.4 0.19 6.6E-06 48.2 4.9 44 8-51 580-629 (852)
198 3ic9_A Dihydrolipoamide dehydr 91.3 0.28 9.6E-06 43.8 5.8 48 4-52 224-275 (492)
199 4g6h_A Rotenone-insensitive NA 91.3 0.22 7.4E-06 44.8 5.0 53 3-55 280-336 (502)
200 2q7v_A Thioredoxin reductase; 90.9 0.47 1.6E-05 39.4 6.4 49 4-52 196-250 (325)
201 1v59_A Dihydrolipoamide dehydr 90.8 0.19 6.4E-06 44.6 4.1 45 4-51 105-157 (478)
202 1xhc_A NADH oxidase /nitrite r 90.7 0.39 1.3E-05 41.1 5.9 45 3-50 68-112 (367)
203 3r9u_A Thioredoxin reductase; 90.7 0.21 7.1E-06 41.1 4.0 45 3-50 70-117 (315)
204 3fim_B ARYL-alcohol oxidase; A 90.5 0.2 6.9E-06 45.8 4.1 55 6-60 219-286 (566)
205 3ntd_A FAD-dependent pyridine 90.5 0.33 1.1E-05 43.9 5.5 46 5-50 68-116 (565)
206 1fl2_A Alkyl hydroperoxide red 90.4 0.41 1.4E-05 39.4 5.6 48 4-51 188-242 (310)
207 3h8l_A NADH oxidase; membrane 90.4 0.42 1.4E-05 41.3 5.9 48 3-51 64-113 (409)
208 3q9t_A Choline dehydrogenase a 90.3 0.23 7.9E-06 45.5 4.3 53 7-59 218-279 (577)
209 2q0l_A TRXR, thioredoxin reduc 90.3 0.5 1.7E-05 38.9 6.1 46 7-52 191-242 (311)
210 3gwf_A Cyclohexanone monooxyge 90.3 0.29 9.9E-06 44.4 4.9 48 2-53 337-386 (540)
211 3dgz_A Thioredoxin reductase 2 90.1 0.43 1.5E-05 42.4 5.9 49 3-51 233-287 (488)
212 4b63_A L-ornithine N5 monooxyg 90.1 0.22 7.6E-06 44.6 3.9 46 4-49 154-212 (501)
213 3h28_A Sulfide-quinone reducta 90.1 0.44 1.5E-05 41.6 5.8 46 3-51 64-109 (430)
214 3uox_A Otemo; baeyer-villiger 89.9 0.25 8.6E-06 44.9 4.2 44 3-51 346-391 (545)
215 3lxd_A FAD-dependent pyridine 89.8 0.53 1.8E-05 40.8 6.1 46 3-50 73-118 (415)
216 3ics_A Coenzyme A-disulfide re 89.6 0.57 2E-05 42.7 6.4 46 5-50 103-151 (588)
217 1dxl_A Dihydrolipoamide dehydr 89.6 0.32 1.1E-05 42.9 4.6 45 4-51 105-151 (470)
218 1ebd_A E3BD, dihydrolipoamide 89.6 0.47 1.6E-05 41.7 5.6 45 4-51 100-145 (455)
219 4dsg_A UDP-galactopyranose mut 89.5 0.37 1.3E-05 43.0 4.9 44 6-51 224-270 (484)
220 1m6i_A Programmed cell death p 89.4 0.31 1.1E-05 43.6 4.3 43 7-51 102-144 (493)
221 3t37_A Probable dehydrogenase; 89.4 0.37 1.3E-05 43.1 4.9 53 7-59 223-280 (526)
222 3h28_A Sulfide-quinone reducta 89.3 0.49 1.7E-05 41.3 5.4 52 3-56 208-261 (430)
223 3hyw_A Sulfide-quinone reducta 89.1 0.15 5.1E-06 44.7 2.0 55 4-60 209-265 (430)
224 3kd9_A Coenzyme A disulfide re 89.1 0.73 2.5E-05 40.4 6.5 43 6-50 70-113 (449)
225 2a8x_A Dihydrolipoyl dehydroge 89.1 0.31 1.1E-05 43.0 4.1 45 4-51 100-146 (464)
226 1ojt_A Surface protein; redox- 88.9 0.25 8.5E-06 44.0 3.3 46 4-52 104-161 (482)
227 1vdc_A NTR, NADPH dependent th 88.7 0.75 2.6E-05 38.2 6.1 48 5-52 205-260 (333)
228 3iwa_A FAD-dependent pyridine 88.5 0.57 2E-05 41.4 5.4 44 7-50 78-124 (472)
229 3fg2_P Putative rubredoxin red 88.3 0.89 3.1E-05 39.2 6.4 45 3-50 65-109 (404)
230 4ap3_A Steroid monooxygenase; 88.1 0.52 1.8E-05 42.8 4.9 46 2-52 350-397 (549)
231 1ps9_A 2,4-dienoyl-COA reducta 87.8 0.73 2.5E-05 42.8 5.8 47 3-52 581-629 (671)
232 3pl8_A Pyranose 2-oxidase; sub 87.6 0.63 2.2E-05 43.0 5.2 54 7-60 272-334 (623)
233 4eqs_A Coenzyme A disulfide re 87.3 0.63 2.1E-05 40.9 4.8 54 3-60 196-250 (437)
234 2v3a_A Rubredoxin reductase; a 86.8 0.74 2.5E-05 39.4 4.9 44 5-51 70-113 (384)
235 4a5l_A Thioredoxin reductase; 86.6 0.97 3.3E-05 37.1 5.5 48 3-51 74-121 (314)
236 3vrd_B FCCB subunit, flavocyto 86.4 1.2 4.2E-05 38.1 6.2 46 3-51 63-108 (401)
237 2a87_A TRXR, TR, thioredoxin r 86.0 0.82 2.8E-05 38.1 4.7 47 6-52 202-253 (335)
238 4eqs_A Coenzyme A disulfide re 85.8 1.4 4.9E-05 38.5 6.3 47 5-51 67-116 (437)
239 3l8k_A Dihydrolipoyl dehydroge 84.5 1.1 3.9E-05 39.4 5.1 52 9-60 225-283 (466)
240 3qfa_A Thioredoxin reductase 1 83.7 1.8 6.3E-05 38.7 6.2 49 3-51 258-315 (519)
241 2qae_A Lipoamide, dihydrolipoy 83.3 1.2 4E-05 39.3 4.7 45 4-51 102-148 (468)
242 3l8k_A Dihydrolipoyl dehydroge 82.5 1.4 4.9E-05 38.8 4.9 43 5-50 99-143 (466)
243 1zmd_A Dihydrolipoyl dehydroge 82.3 1.7 5.9E-05 38.3 5.4 45 4-51 106-152 (474)
244 1xdi_A RV3303C-LPDA; reductase 81.9 1.4 4.6E-05 39.3 4.6 47 4-51 104-156 (499)
245 1zk7_A HGII, reductase, mercur 81.6 2.7 9.2E-05 36.9 6.4 43 5-50 104-149 (467)
246 1o94_A Tmadh, trimethylamine d 81.5 2.4 8.1E-05 39.8 6.2 48 3-52 579-647 (729)
247 2x8g_A Thioredoxin glutathione 80.8 3.6 0.00012 37.4 7.1 50 3-52 334-396 (598)
248 3ayj_A Pro-enzyme of L-phenyla 80.4 0.6 2.1E-05 43.9 1.7 43 9-51 360-414 (721)
249 3sx6_A Sulfide-quinone reducta 79.7 1.8 6.1E-05 37.7 4.5 47 3-51 216-269 (437)
250 2yqu_A 2-oxoglutarate dehydrog 78.9 1.5 5E-05 38.5 3.7 44 4-51 98-141 (455)
251 3c4a_A Probable tryptophan hyd 78.5 0.25 8.5E-06 42.4 -1.4 40 2-52 105-144 (381)
252 2hqm_A GR, grase, glutathione 78.3 2.2 7.5E-05 37.7 4.7 44 5-51 115-160 (479)
253 1hyu_A AHPF, alkyl hydroperoxi 77.3 3.1 0.00011 37.3 5.4 48 4-51 399-453 (521)
254 1w4x_A Phenylacetone monooxyge 76.9 1.6 5.5E-05 39.3 3.4 48 3-55 346-396 (542)
255 1y56_A Hypothetical protein PH 76.8 1.1 3.6E-05 40.0 2.1 45 7-51 172-219 (493)
256 2gag_A Heterotetrameric sarcos 76.2 3.5 0.00012 40.1 5.7 57 3-59 324-392 (965)
257 4fk1_A Putative thioredoxin re 75.5 1.8 6.3E-05 35.5 3.2 57 3-60 188-246 (304)
258 3urh_A Dihydrolipoyl dehydroge 75.3 4.3 0.00015 35.9 5.7 43 5-50 125-169 (491)
259 1gte_A Dihydropyrimidine dehyd 73.5 6.6 0.00022 38.4 6.9 55 3-57 378-450 (1025)
260 3lad_A Dihydrolipoamide dehydr 72.9 3.3 0.00011 36.4 4.3 44 5-51 109-154 (476)
261 2eq6_A Pyruvate dehydrogenase 70.1 3.6 0.00012 36.2 3.9 41 5-51 103-143 (464)
262 2vdc_G Glutamate synthase [NAD 69.6 2.2 7.5E-05 37.7 2.4 57 3-60 310-390 (456)
263 1cjc_A Protein (adrenodoxin re 69.3 4.7 0.00016 35.5 4.5 46 8-53 270-335 (460)
264 4g6h_A Rotenone-insensitive NA 67.0 6.9 0.00024 34.9 5.1 44 7-51 108-169 (502)
265 4a9w_A Monooxygenase; baeyer-v 63.0 4.1 0.00014 33.6 2.7 48 7-59 246-294 (357)
266 1fec_A Trypanothione reductase 62.7 11 0.00037 33.3 5.5 43 5-50 113-162 (490)
267 3dgh_A TRXR-1, thioredoxin red 62.5 13 0.00044 32.7 6.0 43 5-50 118-161 (483)
268 3qfa_A Thioredoxin reductase 1 60.7 12 0.00042 33.3 5.6 43 5-50 140-184 (519)
269 1lqt_A FPRA; NADP+ derivative, 60.4 6.8 0.00023 34.4 3.8 46 8-53 265-328 (456)
270 3dgz_A Thioredoxin reductase 2 59.2 11 0.00036 33.3 4.8 43 5-50 114-158 (488)
271 3klj_A NAD(FAD)-dependent dehy 56.1 0.88 3E-05 39.2 -2.8 45 3-60 196-241 (385)
272 3dk9_A Grase, GR, glutathione 55.3 14 0.00047 32.4 4.9 43 4-50 117-159 (478)
273 1onf_A GR, grase, glutathione 54.9 5.4 0.00019 35.4 2.2 44 5-51 99-153 (500)
274 4gcm_A TRXR, thioredoxin reduc 54.8 25 0.00084 28.5 6.1 45 5-51 72-116 (312)
275 1mo9_A ORF3; nucleotide bindin 53.8 12 0.00042 33.3 4.3 40 6-50 146-185 (523)
276 1lvl_A Dihydrolipoamide dehydr 53.3 16 0.00053 31.9 4.9 42 4-51 105-146 (458)
277 2r9z_A Glutathione amide reduc 49.9 18 0.00062 31.6 4.8 41 5-51 102-142 (463)
278 2xve_A Flavin-containing monoo 49.8 15 0.00051 32.2 4.2 38 9-52 240-277 (464)
279 2wpf_A Trypanothione reductase 49.4 11 0.00039 33.3 3.4 43 5-50 117-166 (495)
280 2gag_A Heterotetrameric sarcos 47.8 12 0.00042 36.3 3.5 48 4-51 190-253 (965)
281 4b63_A L-ornithine N5 monooxyg 44.6 21 0.00071 31.6 4.3 42 11-52 355-410 (501)
282 1ges_A Glutathione reductase; 40.8 34 0.0012 29.7 5.0 40 5-50 103-142 (450)
283 2gv8_A Monooxygenase; FMO, FAD 39.8 23 0.00079 30.6 3.8 36 15-52 257-293 (447)
284 2x8g_A Thioredoxin glutathione 39.2 47 0.0016 29.9 5.8 43 5-50 216-260 (598)
285 2vdc_G Glutamate synthase [NAD 35.5 4.1 0.00014 35.9 -1.9 40 3-51 180-219 (456)
286 3o0h_A Glutathione reductase; 33.3 50 0.0017 28.8 4.9 44 4-51 123-166 (484)
287 4dna_A Probable glutathione re 31.9 34 0.0011 29.7 3.5 42 5-51 103-145 (463)
288 4a5l_A Thioredoxin reductase; 29.8 94 0.0032 24.7 5.8 47 5-51 198-250 (314)
289 1lqt_A FPRA; NADP+ derivative, 28.9 4.3 0.00015 35.7 -2.9 39 4-51 70-108 (456)
290 3kkj_A Amine oxidase, flavin-c 27.1 44 0.0015 25.2 3.2 38 209-247 291-330 (336)
291 4b1b_A TRXR, thioredoxin reduc 27.0 77 0.0026 28.4 5.1 45 4-51 149-197 (542)
292 2i9o_A MHB8A peptide; beta-hai 26.2 62 0.0021 16.8 2.5 25 218-242 12-36 (37)
293 1cjc_A Protein (adrenodoxin re 26.2 5 0.00017 35.3 -2.9 40 3-51 67-106 (460)
294 1gte_A Dihydropyrimidine dehyd 20.1 9.1 0.00031 37.4 -2.7 41 3-50 246-286 (1025)
No 1
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.96 E-value=8.2e-28 Score=209.30 Aligned_cols=201 Identities=22% Similarity=0.311 Sum_probs=157.1
Q ss_pred hhHHHhCCcEEEeCceeEEEEEcCCe-EEEEeCCC--cEEEcCEEEEcCCCChHHHHHHc-CCCC--CCceeeeeeEEEE
Q psy3952 2 GEEFCELGGEIRLNQQVESFKENPES-VTISTKQG--DHLESSYALVCAGLQADEMALKS-GCSL--EPAIVPFRGEYLL 75 (252)
Q Consensus 2 ~~~a~~~G~~i~~~~~V~~i~~~~~~-~~V~t~~g--~~i~A~~VV~AaG~ws~~l~~~~-g~~~--~~~~~p~~g~~~~ 75 (252)
.+.++++|++|+++++|++|+.++++ |.|.|.+| .++.||.||+|+|+|+..|++++ |++. ..++.|.||+++.
T Consensus 157 ~~~~~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~a~~VV~A~G~~s~~l~~~~~g~~~~~~~~i~p~rG~~~~ 236 (369)
T 3dme_A 157 QGDAESDGAQLVFHTPLIAGRVRPEGGFELDFGGAEPMTLSCRVLINAAGLHAPGLARRIEGIPRDSIPPEYLCKGSYFT 236 (369)
T ss_dssp HHHHHHTTCEEECSCCEEEEEECTTSSEEEEECTTSCEEEEEEEEEECCGGGHHHHHHTEETSCGGGSCCCEEEEEEEEE
T ss_pred HHHHHHCCCEEECCCEEEEEEEcCCceEEEEECCCceeEEEeCEEEECCCcchHHHHHHhcCCCccccceeeecceEEEE
Confidence 56788999999999999999998765 88988877 47999999999999999999999 8631 2578999999999
Q ss_pred eCCCccccccceeecCCCCCCCCceeEEEEecCCcEEEcccceecccccCccccccchhHHhhhhcCCCccccchhhhhh
Q psy3952 76 LNPAKQHLVRGNIYPVPDPNFPFLGVHFTPRMDGSVWLGPNAVLAFKKEGYRWRDFSVRELFSTLRYPGFWRLGLKYTRY 155 (252)
Q Consensus 76 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (252)
++.+ ...++.+|+.|... ..++++.+..+|++++|++.+... +++. ..+. +
T Consensus 237 ~~~~--~~~~~~~~~~p~~~--~~~~~~~~~~~g~~~iG~t~e~~~---~~~~-~~~~---------------------~ 287 (369)
T 3dme_A 237 LAGR--APFSRLIYPVPQHA--GLGVHLTLDLGGQAKFGPDTEWIA---TEDY-TLDP---------------------R 287 (369)
T ss_dssp CSSS--CSCSSEEEECTTCS--SCCCCEEECTTSCEEECCCCEEES---SCCC-CCCG---------------------G
T ss_pred ECCC--CccCceeecCCCCC--CceEEEeCccCCcEEECCCccccc---cccc-ccCH---------------------H
Confidence 8763 34556677777542 346778888899999999876421 1111 1111 2
Q ss_pred hhHHHHhhhChhHHHHHHHHhccCCCCCCceecCCcceeEeecCCCCcccceEE-Ee----cCCeEEEeccCCccccchH
Q psy3952 156 GSKEMIMSWFPSMRVNELKQYIEEIEAGDIQRGPSGVRAQALSSSGDLVDDFVF-HS----AGRTLHCRNAPSPAATSSL 230 (252)
Q Consensus 156 ~~~~l~~~~~~~~~~~~~~~~~P~l~~~~i~~~w~G~rp~~~~~d~~p~~~~~i-~~----~~~~~~~~G~~~~G~t~a~ 230 (252)
.++. +++.+.+++|.|+..++.+.|+|+||++.++ +.|+.+|+| ++ .+|+|+++|++++|+|+||
T Consensus 288 ~~~~---------l~~~~~~~~P~l~~~~v~~~w~G~Rp~~~~~-~~~d~~p~i~g~~~~~~~~l~~~~G~~~~G~t~ap 357 (369)
T 3dme_A 288 RADV---------FYAAVRSYWPALPDGALAPGYTGIRPKISGP-HEPAADFAIAGPASHGVAGLVNLYGIESPGLTASL 357 (369)
T ss_dssp GGGG---------HHHHHHTTCTTCCTTCCEEEEEEEEEESSCT-TSCCCCCEEECHHHHCCTTEEEEECCCTTHHHHHH
T ss_pred HHHH---------HHHHHHHHCCCCChhhceecceeccccccCC-CCCcCCeEEecccccCCCCEEEEeCCCCchHhccH
Confidence 3333 3488999999999999999999999986322 245567777 44 4799999999999999999
Q ss_pred HHHHHHHHHHH
Q psy3952 231 AIAKHILNELR 241 (252)
Q Consensus 231 ~~g~~va~~i~ 241 (252)
++|+.++++|.
T Consensus 358 ~~a~~~a~~i~ 368 (369)
T 3dme_A 358 AIAEETLARLA 368 (369)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHhh
Confidence 99999999985
No 2
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.94 E-value=3.5e-26 Score=200.14 Aligned_cols=195 Identities=12% Similarity=0.105 Sum_probs=145.8
Q ss_pred ChhHHHhCCcEEEeCceeEEEEEcCCeEEEEeCCCcEEEcCEEEEcCCCChHHHHHHcCCCCCCceeeeeeEEEEeCCCc
Q psy3952 1 MGEEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQADEMALKSGCSLEPAIVPFRGEYLLLNPAK 80 (252)
Q Consensus 1 l~~~a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g~~i~A~~VV~AaG~ws~~l~~~~g~~~~~~~~p~~g~~~~~~~~~ 80 (252)
|++.|+++|++|+++++|++|+.++++|.|+|++| ++.||+||+|+|+|+..|++++|+. .+++.|.+|+++.++.+.
T Consensus 160 l~~~a~~~Gv~i~~~~~V~~i~~~~~~~~V~t~~g-~i~a~~VV~A~G~~s~~l~~~~g~~-~~~~~p~rg~~~~~~~~~ 237 (381)
T 3nyc_A 160 YLRGIRRNQGQVLCNHEALEIRRVDGAWEVRCDAG-SYRAAVLVNAAGAWCDAIAGLAGVR-PLGLQPKRRSAFIFAPPP 237 (381)
T ss_dssp HHHHHHHTTCEEESSCCCCEEEEETTEEEEECSSE-EEEESEEEECCGGGHHHHHHHHTCC-CCCCEEEEEEEEEECCCT
T ss_pred HHHHHHHCCCEEEcCCEEEEEEEeCCeEEEEeCCC-EEEcCEEEECCChhHHHHHHHhCCC-CCceeeeEEEEEEECCCc
Confidence 35678899999999999999999888899999999 9999999999999999999999873 368999999999887532
Q ss_pred cccccc-eeecCCCCCCCCceeEEEEecCCcEEEcccceecccccCccccccchhHHhhhhcCCCccccchhhhhhhhHH
Q psy3952 81 QHLVRG-NIYPVPDPNFPFLGVHFTPRMDGSVWLGPNAVLAFKKEGYRWRDFSVRELFSTLRYPGFWRLGLKYTRYGSKE 159 (252)
Q Consensus 81 ~~~~~~-~i~~~~~~~~~~~~~~~~~~~~g~~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (252)
...... ..+... ..++|++|.. |++++|++.+......+... +. ..++.
T Consensus 238 ~~~~~~~p~~~~~-----~~~~y~~p~~-g~~~ig~~~~~~~~~~~~~~---~~---------------------~~~~~ 287 (381)
T 3nyc_A 238 GIDCHDWPMLVSL-----DESFYLKPDA-GMLLGSPANADPVEAHDVQP---EQ---------------------LDIAT 287 (381)
T ss_dssp TCCCTTCCEEEET-----TSSCEEEEET-TEEEEECCCCEECCSSCCCC---CH---------------------HHHHH
T ss_pred CCCcCccceEEeC-----CCCEEEEeCC-CcEEEeCCcCCCCCcccCCC---Ch---------------------HHHHH
Confidence 111111 011111 2357888876 89999987653211111000 00 12222
Q ss_pred HHhhhChhHHHHHHHHhccCCCCCCceecCCcceeEeecCCCCcccceEEEec---CCeEEEeccCCccccchHHHHHHH
Q psy3952 160 MIMSWFPSMRVNELKQYIEEIEAGDIQRGPSGVRAQALSSSGDLVDDFVFHSA---GRTLHCRNAPSPAATSSLAIAKHI 236 (252)
Q Consensus 160 l~~~~~~~~~~~~~~~~~P~l~~~~i~~~w~G~rp~~~~~d~~p~~~~~i~~~---~~~~~~~G~~~~G~t~a~~~g~~v 236 (252)
+ ++.+.+ +|.+...++.+.|+|+||++ ||+.| +|+.. +|+|+++|++|+|+++||++|+.+
T Consensus 288 ~---------~~~~~~-~~~l~~~~~~~~w~G~r~~t--~D~~p----~ig~~~~~~~l~~a~G~~g~G~~~ap~~g~~l 351 (381)
T 3nyc_A 288 G---------MYLIEE-ATTLTIRRPEHTWAGLRSFV--ADGDL----VAGYAANAEGFFWVAAQGGYGIQTSAAMGEAS 351 (381)
T ss_dssp H---------HHHHHH-HBSCCCCCCSEEEEEEEEEC--TTSCC----EEEECTTSTTEEEEECCTTCTTTTHHHHHHHH
T ss_pred H---------HHHHHh-cCCCcccceeeeeEEccccC--CCCCc----eecCCCCCCCeEEEEcCCChhHhhCHHHHHHH
Confidence 2 345544 58888888999999999986 88765 58774 699999999999999999999999
Q ss_pred HHHHHhh
Q psy3952 237 LNELRRE 243 (252)
Q Consensus 237 a~~i~~~ 243 (252)
|++|.++
T Consensus 352 a~~i~g~ 358 (381)
T 3nyc_A 352 AALIRHQ 358 (381)
T ss_dssp HHHHTTC
T ss_pred HHHHhCC
Confidence 9999754
No 3
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.92 E-value=1.8e-24 Score=189.76 Aligned_cols=194 Identities=11% Similarity=0.120 Sum_probs=147.4
Q ss_pred hhHHHhCCcEEEeCceeEEEEEcCCeEE-EEeCCCcEEEcCEEEEcCCCChHHHHHHcCCCCCCceeeeeeEEEEeCCCc
Q psy3952 2 GEEFCELGGEIRLNQQVESFKENPESVT-ISTKQGDHLESSYALVCAGLQADEMALKSGCSLEPAIVPFRGEYLLLNPAK 80 (252)
Q Consensus 2 ~~~a~~~G~~i~~~~~V~~i~~~~~~~~-V~t~~g~~i~A~~VV~AaG~ws~~l~~~~g~~~~~~~~p~~g~~~~~~~~~ 80 (252)
.+.++++|++++++++|++++.++++|. |+|.+| ++.||.||+|+|.|+..|.+++|....+|+.|.+|+++.+++..
T Consensus 156 ~~~~~~~Gv~i~~~~~v~~i~~~~~~v~gv~~~~g-~i~a~~VV~A~G~~s~~l~~~~g~~~~~~~~~~~g~~~~~~~~~ 234 (382)
T 1y56_B 156 AVKAKEYGAKLLEYTEVKGFLIENNEIKGVKTNKG-IIKTGIVVNATNAWANLINAMAGIKTKIPIEPYKHQAVITQPIK 234 (382)
T ss_dssp HHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTE-EEECSEEEECCGGGHHHHHHHHTCCSCCCCEEEEEEEEEECCCS
T ss_pred HHHHHHCCCEEECCceEEEEEEECCEEEEEEECCc-EEECCEEEECcchhHHHHHHHcCCCcCcCCCeeEeEEEEEccCC
Confidence 4677889999999999999999888887 999999 99999999999999999999888621178999999998886531
Q ss_pred ccccc-ceeecCCCCCCCCceeEEEEecCCcEEEcc-cceecccccCccccccchhHHhhhhcCCCccccchhhhhhhhH
Q psy3952 81 QHLVR-GNIYPVPDPNFPFLGVHFTPRMDGSVWLGP-NAVLAFKKEGYRWRDFSVRELFSTLRYPGFWRLGLKYTRYGSK 158 (252)
Q Consensus 81 ~~~~~-~~i~~~~~~~~~~~~~~~~~~~~g~~~iG~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (252)
.... ..++.. . ..++|++|..+| +++|. +.... .+++. ..+. +.++
T Consensus 235 -~~~~~~~~~~~-~----~~~~y~~p~~~g-~~iG~~~~~~~---~~~~~-~~~~---------------------~~~~ 282 (382)
T 1y56_B 235 -RGTINPMVISF-K----YGHAYLTQTFHG-GIIGGIGYEIG---PTYDL-TPTY---------------------EFLR 282 (382)
T ss_dssp -TTSSCSEEEES-T----TTTEEEECCSSS-CCEEECSCCBS---SCCCC-CCCH---------------------HHHH
T ss_pred -cccCCCeEEec-C----CCeEEEEEeCCe-EEEecCCCCCC---CCCCC-CCCH---------------------HHHH
Confidence 1122 223221 1 135788998888 88984 32211 12211 1011 2233
Q ss_pred HHHhhhChhHHHHHHHHhccCCCCCCceecCCcceeEeecCCCCcccceEEEec---CCeEEEeccCCccccchHHHHHH
Q psy3952 159 EMIMSWFPSMRVNELKQYIEEIEAGDIQRGPSGVRAQALSSSGDLVDDFVFHSA---GRTLHCRNAPSPAATSSLAIAKH 235 (252)
Q Consensus 159 ~l~~~~~~~~~~~~~~~~~P~l~~~~i~~~w~G~rp~~~~~d~~p~~~~~i~~~---~~~~~~~G~~~~G~t~a~~~g~~ 235 (252)
.+++.+.+++|.|...++.+.|+|+||.+ +|+.| +++.. +|+|+++|++|+|+++||++|+.
T Consensus 283 ---------~l~~~~~~~~p~l~~~~~~~~~~g~r~~t--~d~~p----~ig~~~~~~~~~~~~G~~g~G~~~a~~~g~~ 347 (382)
T 1y56_B 283 ---------EVSYYFTKIIPALKNLLILRTWAGYYAKT--PDSNP----AIGRIEELNDYYIAAGFSGHGFMMAPAVGEM 347 (382)
T ss_dssp ---------HHHHHHHHHCGGGGGSEEEEEEEEEEEEC--TTSCC----EEEEESSSBTEEEEECCTTCHHHHHHHHHHH
T ss_pred ---------HHHHHHHHhCCCcCCCCceEEEEeccccC--CCCCc----EeccCCCCCCEEEEEecCcchHhhhHHHHHH
Confidence 33478899999999889999999999987 78755 57764 59999999999999999999999
Q ss_pred HHHHHHhh
Q psy3952 236 ILNELRRE 243 (252)
Q Consensus 236 va~~i~~~ 243 (252)
++++|.+.
T Consensus 348 la~~i~~~ 355 (382)
T 1y56_B 348 VAELITKG 355 (382)
T ss_dssp HHHHHHHS
T ss_pred HHHHHhCC
Confidence 99999875
No 4
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.92 E-value=3.1e-24 Score=188.45 Aligned_cols=200 Identities=14% Similarity=0.139 Sum_probs=145.9
Q ss_pred hhHHHhCCcEEEeCceeEEEEEcCCeEEEEeCCCcEEEcCEEEEcCCCChHHHHHHcCCCCCCceeeeeeEEEEeCCCcc
Q psy3952 2 GEEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQADEMALKSGCSLEPAIVPFRGEYLLLNPAKQ 81 (252)
Q Consensus 2 ~~~a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g~~i~A~~VV~AaG~ws~~l~~~~g~~~~~~~~p~~g~~~~~~~~~~ 81 (252)
.+.++++|++++++++|++++.++++|.|+|++| ++.||.||+|+|.|+..+...+|. .+|+.|.+|+++.+++...
T Consensus 157 ~~~~~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~g-~~~a~~vV~A~G~~~~~l~~~~g~--~~pl~~~rg~~~~~~~~~~ 233 (389)
T 2gf3_A 157 RELAEARGAKVLTHTRVEDFDISPDSVKIETANG-SYTADKLIVSMGAWNSKLLSKLNL--DIPLQPYRQVVGFFESDES 233 (389)
T ss_dssp HHHHHHTTCEEECSCCEEEEEECSSCEEEEETTE-EEEEEEEEECCGGGHHHHGGGGTE--ECCCEEEEEEEEEECCCHH
T ss_pred HHHHHHCCCEEEcCcEEEEEEecCCeEEEEeCCC-EEEeCEEEEecCccHHHHhhhhcc--CCceEEEEEEEEEEecCcc
Confidence 4678889999999999999999888898999888 899999999999999999888875 4779999999999875421
Q ss_pred ccc---cceeecCCCCCCCCceeEEEEecCC-cEEEcccceec-ccccCccccccchhHHhhhhcCCCccccchhhhhhh
Q psy3952 82 HLV---RGNIYPVPDPNFPFLGVHFTPRMDG-SVWLGPNAVLA-FKKEGYRWRDFSVRELFSTLRYPGFWRLGLKYTRYG 156 (252)
Q Consensus 82 ~~~---~~~i~~~~~~~~~~~~~~~~~~~~g-~~~iG~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (252)
... ...++..... ...+|+.|..+| ++++|.+.... ..+++.+. .. + ...+.
T Consensus 234 ~~~~~~~~p~~~~~~~---~~~~y~~p~~~g~~~~iG~~~~~~~~~~~~~~~-~~--------------~-----~~~~~ 290 (389)
T 2gf3_A 234 KYSNDIDFPGFMVEVP---NGIYYGFPSFGGCGLKLGYHTFGQKIDPDTINR-EF--------------G-----VYPED 290 (389)
T ss_dssp HHBGGGTCCEEEEEET---TEEEEEECBSTTCCEEEEESSCCEECCTTTCCC-CT--------------T-----SSHHH
T ss_pred cccccccCCEEEEeCC---CCcEEEcCCCCCCcEEEEEcCCCCccCcccccC-cc--------------C-----CCHHH
Confidence 100 0011100000 125678888887 99998653211 01111110 00 0 00022
Q ss_pred hHHHHhhhChhHHHHHHHHhccCCCCCCceecCCcceeEeecCCCCcccceEEEec---CCeEEEeccCCccccchHHHH
Q psy3952 157 SKEMIMSWFPSMRVNELKQYIEEIEAGDIQRGPSGVRAQALSSSGDLVDDFVFHSA---GRTLHCRNAPSPAATSSLAIA 233 (252)
Q Consensus 157 ~~~l~~~~~~~~~~~~~~~~~P~l~~~~i~~~w~G~rp~~~~~d~~p~~~~~i~~~---~~~~~~~G~~~~G~t~a~~~g 233 (252)
++ .+.+.+.++||.+.. ++.+.|+|+||.+ ||+.| +|+.. +|+|+++|++|+|+++||++|
T Consensus 291 ~~---------~l~~~~~~~~P~l~~-~~~~~w~g~r~~t--~D~~p----~ig~~~~~~~l~~a~G~~g~G~~~ap~~g 354 (389)
T 2gf3_A 291 ES---------NLRAFLEEYMPGANG-ELKRGAVCMYTKT--LDEHF----IIDLHPEHSNVVIAAGFSGHGFKFSSGVG 354 (389)
T ss_dssp HH---------HHHHHHHHHCGGGCS-CEEEEEEEEEEEC--TTSCC----EEEEETTEEEEEEEECCTTCCGGGHHHHH
T ss_pred HH---------HHHHHHHHhCCCCCC-CceEEEEEEeccC--CCCCe----EEccCCCCCCEEEEECCccccccccHHHH
Confidence 33 344889999999987 7888999999986 88755 57764 699999999999999999999
Q ss_pred HHHHHHHHhh
Q psy3952 234 KHILNELRRE 243 (252)
Q Consensus 234 ~~va~~i~~~ 243 (252)
+.++++|.+.
T Consensus 355 ~~la~~i~~~ 364 (389)
T 2gf3_A 355 EVLSQLALTG 364 (389)
T ss_dssp HHHHHHHHHS
T ss_pred HHHHHHHcCC
Confidence 9999999875
No 5
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=99.92 E-value=5.2e-24 Score=191.00 Aligned_cols=200 Identities=13% Similarity=0.063 Sum_probs=148.1
Q ss_pred hhHHHhCCcEEEeCceeEEEEE---------------cCCe-EEEEeCCCcEE--EcCEEEEcCCCChHHHHHHcCCCCC
Q psy3952 2 GEEFCELGGEIRLNQQVESFKE---------------NPES-VTISTKQGDHL--ESSYALVCAGLQADEMALKSGCSLE 63 (252)
Q Consensus 2 ~~~a~~~G~~i~~~~~V~~i~~---------------~~~~-~~V~t~~g~~i--~A~~VV~AaG~ws~~l~~~~g~~~~ 63 (252)
.+.++++|++|+++++|++|+. ++++ +.|.|.+| ++ .||.||+|+|+|+..|++++|. .
T Consensus 188 ~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g-~i~~~Ad~VV~AtG~~s~~l~~~~g~--~ 264 (448)
T 3axb_A 188 YRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDG-TRVEVGEKLVVAAGVWSNRLLNPLGI--D 264 (448)
T ss_dssp HHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTS-CEEEEEEEEEECCGGGHHHHHGGGTC--C
T ss_pred HHHHHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCCC-EEeecCCEEEECCCcCHHHHHHHcCC--C
Confidence 5678889999999999999998 5666 46889999 89 9999999999999999999986 5
Q ss_pred CceeeeeeEEEEeCCCccccccceeec--------CCCCCCCCceeEEEEecC-CcEEEcccceecccccCcccc-ccch
Q psy3952 64 PAIVPFRGEYLLLNPAKQHLVRGNIYP--------VPDPNFPFLGVHFTPRMD-GSVWLGPNAVLAFKKEGYRWR-DFSV 133 (252)
Q Consensus 64 ~~~~p~~g~~~~~~~~~~~~~~~~i~~--------~~~~~~~~~~~~~~~~~~-g~~~iG~~~~~~~~~~~~~~~-~~~~ 133 (252)
+++.|.+|+++.+++... .+...++. .|... ...++|++|..+ |++++|++.+.. .+++++.. ..+.
T Consensus 265 ~~~~p~rg~~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~~-~~~~~y~~p~~~~g~~~iG~~~~~~-~~~~~~~~~~~~~ 341 (448)
T 3axb_A 265 TFSRPKKRMVFRVSASTE-GLRRIMREGDLAGAGAPPLII-LPKRVLVRPAPREGSFWVQLSDNLG-RPFALEEDPQPEE 341 (448)
T ss_dssp CSEEEEEEEEEEEECCSH-HHHHHHHHCCTTSSSSCCEEE-ETTTEEEEEETTTTEEEEEECCCTT-SCBCCCSSCCCCH
T ss_pred CcccccceEEEEeCCccc-ccccccccccccccCCCceEE-cCCceEEeecCCCCeEEEecCCccc-CCcccccccCCCh
Confidence 889999999999875321 01110000 00000 013578899888 899999876421 11111110 0000
Q ss_pred hHHhhhhcCCCccccchhhhhhh-hHHHHhhhChhHHHHHHHHhccCCCCCCceecCCcceeE-eecCCCCcccceEEEe
Q psy3952 134 RELFSTLRYPGFWRLGLKYTRYG-SKEMIMSWFPSMRVNELKQYIEEIEAGDIQRGPSGVRAQ-ALSSSGDLVDDFVFHS 211 (252)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~P~l~~~~i~~~w~G~rp~-~~~~d~~p~~~~~i~~ 211 (252)
+. ++ .+++.+.++||.|+..++.+.|+|+||+ + +|+.| +|+.
T Consensus 342 ---------------------~~~~~---------~l~~~~~~~~P~l~~~~~~~~w~G~r~~~t--~d~~p----~ig~ 385 (448)
T 3axb_A 342 ---------------------HYYSL---------AILPILSLYLPQFQDAYPSGGWAGHYDISF--DANPV----VFEP 385 (448)
T ss_dssp ---------------------HHHHH---------HTHHHHHHHCGGGTTCCCSEEEEEEEEEET--TSSCE----EECG
T ss_pred ---------------------HHHHH---------HHHHHHHHhCcCcccCCcccceEEEecccc--CCCCc----Eeee
Confidence 22 23 3347899999999988999999999998 6 78754 5776
Q ss_pred c-CCeEEEeccCCccccchHHHHHHHHHHHHhh
Q psy3952 212 A-GRTLHCRNAPSPAATSSLAIAKHILNELRRE 243 (252)
Q Consensus 212 ~-~~~~~~~G~~~~G~t~a~~~g~~va~~i~~~ 243 (252)
. +|+|+++|++|+|+++||++|+.++++|.+.
T Consensus 386 ~~~~l~~a~G~~g~G~~~ap~~g~~la~~i~~~ 418 (448)
T 3axb_A 386 WESGIVVAAGTSGSGIMKSDSIGRVAAAVALGM 418 (448)
T ss_dssp GGCSEEEEECCTTCCGGGHHHHHHHHHHHHTTC
T ss_pred cCCCEEEEECCCchhHhHhHHHHHHHHHHHcCC
Confidence 5 7999999999999999999999999999865
No 6
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.91 E-value=2e-23 Score=192.43 Aligned_cols=206 Identities=14% Similarity=0.162 Sum_probs=149.4
Q ss_pred hhHHHhCCcEEEeCceeEEEEEcCCeE-EEEeCC---C--cEEEcCEEEEcCCCChHHHHHHcCCCCCCceeeeeeEEEE
Q psy3952 2 GEEFCELGGEIRLNQQVESFKENPESV-TISTKQ---G--DHLESSYALVCAGLQADEMALKSGCSLEPAIVPFRGEYLL 75 (252)
Q Consensus 2 ~~~a~~~G~~i~~~~~V~~i~~~~~~~-~V~t~~---g--~~i~A~~VV~AaG~ws~~l~~~~g~~~~~~~~p~~g~~~~ 75 (252)
++.|+++|++|+++++|++|.++++++ .|++.+ | .++.|+.||||+|+|++.|.+++|.....++.|.||++++
T Consensus 177 ~~~a~~~G~~i~~~~~V~~l~~~~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s~~l~~~~g~~~~~~v~p~kG~~lv 256 (561)
T 3da1_A 177 MKEAVARGAVALNYMKVESFIYDQGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWVDTLREKDRSKHGKYLKLSKGVHLV 256 (561)
T ss_dssp HHHHHHTTCEEEESEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCGGGHHHHHHTTTCCCSSEEEEEEEEEEE
T ss_pred HHHHHHcCCEEEcCCEEEEEEEcCCeEEEEEEEEcCCCceEEEECCEEEECCCcchHHHHHhcCCCCCceEEeccEEEEE
Confidence 567889999999999999999988774 465432 2 3799999999999999999999987545789999999999
Q ss_pred eCCCccccccceeecCCCCCCCCceeEEEEecCCcEEEcccceecc-cccCccccccchhHHhhhhcCCCccccchhhhh
Q psy3952 76 LNPAKQHLVRGNIYPVPDPNFPFLGVHFTPRMDGSVWLGPNAVLAF-KKEGYRWRDFSVRELFSTLRYPGFWRLGLKYTR 154 (252)
Q Consensus 76 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~iG~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (252)
++....+.....+++.+.. ...+++.|. +|++++|++.+... +..+. ..+ .
T Consensus 257 l~~~~~~~~~~~~~~~~~d---gr~v~~iP~-~g~~~iGtT~~~~~~~~~~~---~~t---------------------~ 308 (561)
T 3da1_A 257 VDQSRFPLRQAVYFDTESD---GRMIFAIPR-EGKTYIGTTDTFYDKDIASP---RMT---------------------V 308 (561)
T ss_dssp EEGGGSCCSSEEEECCSSS---CCCEEEEEE-TTEEEECCCCEEECSCTTCC---CCC---------------------H
T ss_pred ECCccCCCceEEEeccCCC---CcEEEEEec-CCCEEEcCCCCccCCCcCCC---CCC---------------------H
Confidence 9753222222233443111 335778887 78999999876431 11111 111 1
Q ss_pred hhhHHHHhhhChhHHHHHHHHhccCCC--CCCceecCCcceeEeecCCCCc---c-cceEEEecCCeEEEeccCCccccc
Q psy3952 155 YGSKEMIMSWFPSMRVNELKQYIEEIE--AGDIQRGPSGVRAQALSSSGDL---V-DDFVFHSAGRTLHCRNAPSPAATS 228 (252)
Q Consensus 155 ~~~~~l~~~~~~~~~~~~~~~~~P~l~--~~~i~~~w~G~rp~~~~~d~~p---~-~~~~i~~~~~~~~~~G~~~~G~t~ 228 (252)
++++.+ ++.++++||.+. ..++...|+|+||.+.++.+.+ . .++++...+|++.++|.. +|+
T Consensus 309 ~~i~~l---------l~~~~~~~P~l~~~~~~v~~~~aGlRPl~~~~~~~~~~~sR~~~i~~~~~gli~i~Ggk---~Tt 376 (561)
T 3da1_A 309 EDRDYI---------LAAANYMFPSLRLTADDVESSWAGLRPLIHEEGKKASEISRKDEIFFSDSGLISIAGGK---LTG 376 (561)
T ss_dssp HHHHHH---------HHHHHHHCTTCCCCTTTEEEEEEEEEEEEEC-----------CCEEECSSCCEEECCCC---STT
T ss_pred HHHHHH---------HHHHHHhCCCCCCChhhEEEEeEEeccccCCCCCCccccccceEEEecCCCeEEEeCCh---hhh
Confidence 345544 488999999976 7899999999999985432221 2 355565568999999876 999
Q ss_pred hHHHHHHHHHHHHhhcccc
Q psy3952 229 SLAIAKHILNELRREFKLD 247 (252)
Q Consensus 229 a~~~g~~va~~i~~~~~~~ 247 (252)
++.+|+.+++++.+.+++.
T Consensus 377 ~r~mAe~~~d~~~~~~~~~ 395 (561)
T 3da1_A 377 YRKMAERTVDAVAQGLNVN 395 (561)
T ss_dssp HHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHhcCCC
Confidence 9999999999999988764
No 7
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.91 E-value=3.2e-23 Score=181.09 Aligned_cols=195 Identities=14% Similarity=0.133 Sum_probs=138.1
Q ss_pred hhHHHhCCcEEEeCceeEEEEEcCCeEEEEeCCCcEEEcCEEEEcCCCChHHHHHHcCCCCCCceeeeeeEEEEeCCCcc
Q psy3952 2 GEEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQADEMALKSGCSLEPAIVPFRGEYLLLNPAKQ 81 (252)
Q Consensus 2 ~~~a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g~~i~A~~VV~AaG~ws~~l~~~~g~~~~~~~~p~~g~~~~~~~~~~ 81 (252)
.+.++++|++++++++|++|+.++++|.|+|++| ++.||.||+|+|+|+..++. .+|+.|.+|+++.+..+..
T Consensus 156 ~~~~~~~G~~i~~~~~V~~i~~~~~~~~v~~~~g-~~~a~~vV~a~G~~s~~l~~------~l~~~p~rg~~~~~~~~~~ 228 (372)
T 2uzz_A 156 IQLAKEAGCAQLFNCPVTAIRHDDDGVTIETADG-EYQAKKAIVCAGTWVKDLLP------ELPVQPVRKVFAWYQADGR 228 (372)
T ss_dssp HHHHHHTTCEEECSCCEEEEEECSSSEEEEESSC-EEEEEEEEECCGGGGGGTST------TCCCEEEECCEEEECCCGG
T ss_pred HHHHHHCCCEEEcCCEEEEEEEcCCEEEEEECCC-eEEcCEEEEcCCccHHhhcc------ccCceEEEEEEEEEEeccc
Confidence 4667889999999999999999888899999999 89999999999999987753 3678999999888764311
Q ss_pred ccc--cceeecCCCCCCCCceeEEEEecCCcEEEcccce--ecccccCccccccchhHHhhhhcCCCccccchhhhhhhh
Q psy3952 82 HLV--RGNIYPVPDPNFPFLGVHFTPRMDGSVWLGPNAV--LAFKKEGYRWRDFSVRELFSTLRYPGFWRLGLKYTRYGS 157 (252)
Q Consensus 82 ~~~--~~~i~~~~~~~~~~~~~~~~~~~~g~~~iG~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (252)
... ...++..... .....|+.|..+|++++|.+.. ......+. ..... +.+..
T Consensus 229 ~~~~~~~p~~~~~~~--~~~~~y~~p~~~~~~~iG~~~~g~~~~~~~~~--~~~~~-------------------~~~~~ 285 (372)
T 2uzz_A 229 YSVKNKFPAFTGELP--NGDQYYGFPAENDALKIGKHNGGQVIHSADER--VPFAE-------------------VVSDG 285 (372)
T ss_dssp GSTTTTCCEEEEECT--TCCEEEEECCSSSCEEEEESSCCEECCSGGGC--CCTTT-------------------STTGG
T ss_pred cCccccCCEEEEecC--CCCeEEecCCCCCeEEEEecCCCCccCChhhc--cCCCC-------------------CHHHH
Confidence 000 0011100000 0134677787788999997542 11000000 00000 00122
Q ss_pred HHHHhhhChhHHHHHHHHhccCCCCCCceecCCcceeEeecCCCCcccceEEEec---CCeEEEeccCCccccchHHHHH
Q psy3952 158 KEMIMSWFPSMRVNELKQYIEEIEAGDIQRGPSGVRAQALSSSGDLVDDFVFHSA---GRTLHCRNAPSPAATSSLAIAK 234 (252)
Q Consensus 158 ~~l~~~~~~~~~~~~~~~~~P~l~~~~i~~~w~G~rp~~~~~d~~p~~~~~i~~~---~~~~~~~G~~~~G~t~a~~~g~ 234 (252)
+ .+.+.+.++||.+. ++...|+|+||.+ ||+.|+ |+.. +|+|+++|++|+|+++||++|+
T Consensus 286 ~---------~l~~~~~~~~P~l~--~~~~~~~g~r~~t--~d~~p~----ig~~~~~~~l~~~~G~~g~G~~~ap~~g~ 348 (372)
T 2uzz_A 286 S---------EAFPFLRNVLPGIG--CCLYGAACTYDNS--PDEDFI----IDTLPGHDNTLLITGLSGHGFKFASVLGE 348 (372)
T ss_dssp G---------SSHHHHHHHSCSCC--CEEEECCCEEEEC--TTSCCC----EEEETTEEEEEEECCCCSCCGGGHHHHHH
T ss_pred H---------HHHHHHHHHCCCCC--ccceeeEEeeccC--CCCCeE----EecCCCCCCEEEEeCCCccchhccHHHHH
Confidence 2 23478899999997 6788999999986 888664 7664 5999999999999999999999
Q ss_pred HHHHHHHhh
Q psy3952 235 HILNELRRE 243 (252)
Q Consensus 235 ~va~~i~~~ 243 (252)
.++++|.+.
T Consensus 349 ~la~~i~~~ 357 (372)
T 2uzz_A 349 IAADFAQDK 357 (372)
T ss_dssp HHHHHHTTC
T ss_pred HHHHHHhCC
Confidence 999999865
No 8
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.90 E-value=5.2e-23 Score=180.37 Aligned_cols=189 Identities=17% Similarity=0.188 Sum_probs=147.7
Q ss_pred hhHHHhCCcEEEeCceeEEEEEcCCeEEEEeCCCcEEEcCEEEEcCCCChHHHHHHcCCCCCCceeeeeeEEEEeCCCcc
Q psy3952 2 GEEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQADEMALKSGCSLEPAIVPFRGEYLLLNPAKQ 81 (252)
Q Consensus 2 ~~~a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g~~i~A~~VV~AaG~ws~~l~~~~g~~~~~~~~p~~g~~~~~~~~~~ 81 (252)
.+.+++.|++++++++|++|+.++++|.|.|.+| ++.||.||+|+|.|+..+++.+|. .+++.|.+|+++.+++..
T Consensus 171 ~~~~~~~g~~i~~~~~v~~i~~~~~~~~v~~~~g-~~~a~~vV~A~G~~s~~l~~~~~~--~~~~~~~~g~~~~~~~~~- 246 (382)
T 1ryi_A 171 VKAAKMLGAEIFEHTPVLHVERDGEALFIKTPSG-DVWANHVVVASGVWSGMFFKQLGL--NNAFLPVKGECLSVWNDD- 246 (382)
T ss_dssp HHHHHHTTCEEETTCCCCEEECSSSSEEEEETTE-EEEEEEEEECCGGGTHHHHHHTTC--CCCCEEEEEEEEEEECCS-
T ss_pred HHHHHHCCCEEEcCCcEEEEEEECCEEEEEcCCc-eEEcCEEEECCChhHHHHHHhcCC--CCceeccceEEEEECCCC-
Confidence 4667889999999999999998888888999888 999999999999999999998886 578899999998886532
Q ss_pred ccccceeecCCCCCCCCceeEEEEecCCcEEEcccceecccccCccccccchhHHhhhhcCCCccccchhhhhhhhHHHH
Q psy3952 82 HLVRGNIYPVPDPNFPFLGVHFTPRMDGSVWLGPNAVLAFKKEGYRWRDFSVRELFSTLRYPGFWRLGLKYTRYGSKEMI 161 (252)
Q Consensus 82 ~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 161 (252)
...+..++. .+.+++|..+|++++|.+.+.. ++.. ..+. +..+
T Consensus 247 ~~~~~~~~~--------~~~~~~p~~~g~~~vG~~~~~~----~~~~-~~~~---------------------~~~~--- 289 (382)
T 1ryi_A 247 IPLTKTLYH--------DHCYIVPRKSGRLVVGATMKPG----DWSE-TPDL---------------------GGLE--- 289 (382)
T ss_dssp SCCCSEEEE--------TTEEEEECTTSEEEEECCCEET----CCCC-SCCH---------------------HHHH---
T ss_pred CCccceEEc--------CCEEEEEcCCCeEEEeeccccc----CCCC-CCCH---------------------HHHH---
Confidence 122222221 2467888888899999875432 1111 1000 2233
Q ss_pred hhhChhHHHHHHHHhccCCCCCCceecCCcceeEeecCCCCcccceEEEec---CCeEEEeccCCccccchHHHHHHHHH
Q psy3952 162 MSWFPSMRVNELKQYIEEIEAGDIQRGPSGVRAQALSSSGDLVDDFVFHSA---GRTLHCRNAPSPAATSSLAIAKHILN 238 (252)
Q Consensus 162 ~~~~~~~~~~~~~~~~P~l~~~~i~~~w~G~rp~~~~~d~~p~~~~~i~~~---~~~~~~~G~~~~G~t~a~~~g~~va~ 238 (252)
.+++.+.+++|.++..++.+.|+|+||.+ +|+.| +++.. +|+|+++|++|+|+++||.+|+.+++
T Consensus 290 ------~l~~~~~~~~p~l~~~~~~~~w~g~~~~t--~d~~p----~ig~~~~~~~l~~~~G~~g~G~~~a~~~g~~la~ 357 (382)
T 1ryi_A 290 ------SVMKKAKTMLPAIQNMKVDRFWAGLRPGT--KDGKP----YIGRHPEDSRILFAAGHFRNGILLAPATGALISD 357 (382)
T ss_dssp ------HHHHHHHHHCGGGGGSEEEEEEEEEEEEC--SSSCC----EEEEETTEEEEEEEECCSSCTTTTHHHHHHHHHH
T ss_pred ------HHHHHHHHhCCCcCCCceeeEEEEecccC--CCCCc----EeccCCCcCCEEEEEcCCcchHHHhHHHHHHHHH
Confidence 34478999999998888899999999986 77755 57764 59999999999999999999999999
Q ss_pred HHHhh
Q psy3952 239 ELRRE 243 (252)
Q Consensus 239 ~i~~~ 243 (252)
+|.+.
T Consensus 358 ~i~~~ 362 (382)
T 1ryi_A 358 LIMNK 362 (382)
T ss_dssp HHTTC
T ss_pred HHhCC
Confidence 99765
No 9
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.90 E-value=3.4e-22 Score=176.37 Aligned_cols=201 Identities=9% Similarity=-0.015 Sum_probs=141.7
Q ss_pred hhHHHhCCcEEEeCceeEEEEEcCCeEEEEeCCCcEEEcCEEEEcCCCChHHHHHHcCCCCCCceeeeeeEEEEeCCCcc
Q psy3952 2 GEEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQADEMALKSGCSLEPAIVPFRGEYLLLNPAKQ 81 (252)
Q Consensus 2 ~~~a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g~~i~A~~VV~AaG~ws~~l~~~~g~~~~~~~~p~~g~~~~~~~~~~ 81 (252)
.+.|+++|++|+++++|++|+.++++|+|.|++| +++|+.||+|+|+|+..+.+++|. .+|+.|.+++++.+++...
T Consensus 160 ~~~a~~~Gv~i~~~~~V~~i~~~~~~v~v~t~~g-~i~a~~VV~A~G~~s~~l~~~~g~--~~p~~~~~~~~~~~~~~~~ 236 (397)
T 2oln_A 160 FTLAQAAGATLRAGETVTELVPDADGVSVTTDRG-TYRAGKVVLACGPYTNDLLEPLGA--RLAYSVYEMAIAAYRQATP 236 (397)
T ss_dssp HHHHHHTTCEEEESCCEEEEEEETTEEEEEESSC-EEEEEEEEECCGGGHHHHHGGGTC--CCCEEEEEEEEEEEEBCSC
T ss_pred HHHHHHcCCEEECCCEEEEEEEcCCeEEEEECCC-EEEcCEEEEcCCcChHHHhhhcCC--CCCeeEEEEEEEEEeecCc
Confidence 4567889999999999999998888899999888 899999999999999999998886 5889999999988864311
Q ss_pred c-cccceeecCCCCCCCCceeEEEEecCC----cEEEccccee--cccccCccccccchhHHhhhhcCCCccccchhhhh
Q psy3952 82 H-LVRGNIYPVPDPNFPFLGVHFTPRMDG----SVWLGPNAVL--AFKKEGYRWRDFSVRELFSTLRYPGFWRLGLKYTR 154 (252)
Q Consensus 82 ~-~~~~~i~~~~~~~~~~~~~~~~~~~~g----~~~iG~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (252)
. .....+.............|++|..+| ++++|.+... ...+++.+. ..+ .
T Consensus 237 ~~~~p~~~~~~~~~~~~~~~~y~~p~~~~~~~~~~~~G~~~~~~~~~~~~~~~~-~~~---------------------~ 294 (397)
T 2oln_A 237 VTEAPFWFAFQQPTPQDTNLFYGFGHNPWAPGEFVRCGPDFEVDPLDHPSAATG-VAD---------------------R 294 (397)
T ss_dssp CSCCCEEEEECCCCSSSCCCEEECCCCSSSSSSEEEEEECCCCSCCSSGGGCCS-SCC---------------------H
T ss_pred ccCCCEEEEecCCCCcccceEEECCCCCCCCCceEEEEecCCCCCcCCCccccC-CCC---------------------H
Confidence 0 011111111100000015677886665 7999965421 001111100 000 0
Q ss_pred hhhHHHHhhhChhHHHHHHHHhccCCCCCCceecCCcceeEeecCCCCcccceEEEec-------CCeEEEeccCCcccc
Q psy3952 155 YGSKEMIMSWFPSMRVNELKQYIEEIEAGDIQRGPSGVRAQALSSSGDLVDDFVFHSA-------GRTLHCRNAPSPAAT 227 (252)
Q Consensus 155 ~~~~~l~~~~~~~~~~~~~~~~~P~l~~~~i~~~w~G~rp~~~~~d~~p~~~~~i~~~-------~~~~~~~G~~~~G~t 227 (252)
+.++ .+.+.+.++||.+.. .+.+.|+|+++.+.+||+.| +|++. +|+|+++| |+|++
T Consensus 295 ~~~~---------~l~~~~~~~~p~l~~-~~~~~~~g~~~~p~t~D~~p----~ig~~~~~~~~~~~l~~a~G--g~G~~ 358 (397)
T 2oln_A 295 RQMD---------RLSGWLRDHLPTVDP-DPVRTSTCLAVLPTDPERQF----FLGTARDLMTHGEKLVVYGA--GWAFK 358 (397)
T ss_dssp HHHH---------HHHHHHHHHCTTBCS-SCSEEEEEEEEEESSTTCCC----EEEESTTTSTTGGGEEEEEE--SSCGG
T ss_pred HHHH---------HHHHHHHHhCCCCCC-CceeEEEEEecCCcCCCCCe----EeecCCccccCCCCEEEEeC--cchhh
Confidence 2232 344788999999987 77789999987334588755 57763 68999999 79999
Q ss_pred chHHHHHHHHHHHHhh
Q psy3952 228 SSLAIAKHILNELRRE 243 (252)
Q Consensus 228 ~a~~~g~~va~~i~~~ 243 (252)
+||.+|+.++++|.+.
T Consensus 359 ~ap~~g~~la~~i~~~ 374 (397)
T 2oln_A 359 FVPLFGRICADLAVED 374 (397)
T ss_dssp GHHHHHHHHHHHHHHS
T ss_pred ccHHHHHHHHHHHhCC
Confidence 9999999999999865
No 10
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.90 E-value=2.1e-22 Score=177.66 Aligned_cols=192 Identities=11% Similarity=0.102 Sum_probs=146.3
Q ss_pred hhHHHhCCcEEEeCceeEEEEEcCCe-EEEEeCCCcEEEcCEEEEcCCCChHHHHHHcCCCCCCceeeeeeEEEEeCCCc
Q psy3952 2 GEEFCELGGEIRLNQQVESFKENPES-VTISTKQGDHLESSYALVCAGLQADEMALKSGCSLEPAIVPFRGEYLLLNPAK 80 (252)
Q Consensus 2 ~~~a~~~G~~i~~~~~V~~i~~~~~~-~~V~t~~g~~i~A~~VV~AaG~ws~~l~~~~g~~~~~~~~p~~g~~~~~~~~~ 80 (252)
.+.+++.|++++++++|++++.++++ +.|+|.+| ++.||.||+|+|.|+..+.+++|+ .+|+.|.+++++++++.
T Consensus 181 ~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g-~~~a~~vV~a~G~~s~~l~~~~g~--~~~~~~~~~~~~~~~~~- 256 (405)
T 2gag_B 181 ARKANEMGVDIIQNCEVTGFIKDGEKVTGVKTTRG-TIHAGKVALAGAGHSSVLAEMAGF--ELPIQSHPLQALVSELF- 256 (405)
T ss_dssp HHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTC-CEEEEEEEECCGGGHHHHHHHHTC--CCCEEEEEEEEEEEEEB-
T ss_pred HHHHHHCCCEEEcCCeEEEEEEeCCEEEEEEeCCc-eEECCEEEECCchhHHHHHHHcCC--CCCccccceeEEEecCC-
Confidence 45678899999999999999988766 66899888 899999999999999999999987 57899999998877532
Q ss_pred cccccceeecCCCCCCCCceeEEEEecCCcEEEcccceecccccCccccccchhHHhhhhcCCCccccchhhhhhhhHHH
Q psy3952 81 QHLVRGNIYPVPDPNFPFLGVHFTPRMDGSVWLGPNAVLAFKKEGYRWRDFSVRELFSTLRYPGFWRLGLKYTRYGSKEM 160 (252)
Q Consensus 81 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 160 (252)
.......++. + ...+|++|..+|++++|.+.+.. .++.. ..+. +.++
T Consensus 257 ~~~~~~~~~~-~-----~~~~y~~p~~~g~~~ig~~~~~~---~~~~~-~~~~---------------------~~~~-- 303 (405)
T 2gag_B 257 EPVHPTVVMS-N-----HIHVYVSQAHKGELVMGAGIDSY---NGYGQ-RGAF---------------------HVIQ-- 303 (405)
T ss_dssp CSCCCSEEEE-T-----TTTEEEEECTTSEEEEEEEECSS---CCCSS-CCCT---------------------HHHH--
T ss_pred ccccCceEEe-C-----CCcEEEEEcCCCcEEEEeccCCC---Ccccc-CCCH---------------------HHHH--
Confidence 1111222211 1 23577888888999999765421 11111 0000 2233
Q ss_pred HhhhChhHHHHHHHHhccCCCCCCceecCCcceeEeecCCCCcccceEEEec--CCeEEEeccCCccccchHHHHHHHHH
Q psy3952 161 IMSWFPSMRVNELKQYIEEIEAGDIQRGPSGVRAQALSSSGDLVDDFVFHSA--GRTLHCRNAPSPAATSSLAIAKHILN 238 (252)
Q Consensus 161 ~~~~~~~~~~~~~~~~~P~l~~~~i~~~w~G~rp~~~~~d~~p~~~~~i~~~--~~~~~~~G~~~~G~t~a~~~g~~va~ 238 (252)
.+.+.+.+++|.++..++.+.|+|+||++ +|+.| +++.. +|+|+++|++|+|+++|+.+|+.+++
T Consensus 304 -------~l~~~~~~~~p~l~~~~~~~~w~g~~~~t--~d~~p----~ig~~~~~~l~~~~G~~g~G~~~a~~~g~~la~ 370 (405)
T 2gag_B 304 -------EQMAAAVELFPIFARAHVLRTWGGIVDTT--MDASP----IISKTPIQNLYVNCGWGTGGFKGTPGAGFTLAH 370 (405)
T ss_dssp -------HHHHHHHHHCGGGGGCEECEEEEEEEEEE--TTSCC----EEEECSSBTEEEEECCGGGCSTTHHHHHHHHHH
T ss_pred -------HHHHHHHHhCCccccCCcceEEeeccccC--CCCCC----EecccCCCCEEEEecCCCchhhHHHHHHHHHHH
Confidence 33478899999998888899999999987 78755 57775 59999999999999999999999999
Q ss_pred HHHhh
Q psy3952 239 ELRRE 243 (252)
Q Consensus 239 ~i~~~ 243 (252)
+|.+.
T Consensus 371 ~i~g~ 375 (405)
T 2gag_B 371 TIAND 375 (405)
T ss_dssp HHHHT
T ss_pred HHhCC
Confidence 99865
No 11
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.89 E-value=6.3e-23 Score=193.44 Aligned_cols=192 Identities=11% Similarity=0.062 Sum_probs=142.5
Q ss_pred hhHHHhCCcEEEeCceeEEEEEcCCeEEEEeCCCc-EEEcCEEEEcCCCChHHHHHHcCCCCCCceeeeeeEEEEeCCCc
Q psy3952 2 GEEFCELGGEIRLNQQVESFKENPESVTISTKQGD-HLESSYALVCAGLQADEMALKSGCSLEPAIVPFRGEYLLLNPAK 80 (252)
Q Consensus 2 ~~~a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g~-~i~A~~VV~AaG~ws~~l~~~~g~~~~~~~~p~~g~~~~~~~~~ 80 (252)
.+.+++.|++|+++++|++|+.++++|.|.|.+|. ++.|+.||+|+|+|+..+...++ +|+.|++|+++.++...
T Consensus 419 ~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~~i~Ad~VVlAtG~~s~~l~~~~~----lpl~p~rGq~~~~~~~~ 494 (689)
T 3pvc_A 419 MMLAQQNGMTCHYQHELQRLKRIDSQWQLTFGQSQAAKHHATVILATGHRLPEWEQTHH----LPLSAVRGQVSHIPTTP 494 (689)
T ss_dssp HHHHHHTTCEEEESCCEEEEEECSSSEEEEEC-CCCCEEESEEEECCGGGTTCSTTTTT----SCCEEEEEEEEEEECCT
T ss_pred HHHHHhCCCEEEeCCeEeEEEEeCCeEEEEeCCCcEEEECCEEEECCCcchhccccccC----CccccccCcEEEECCCC
Confidence 46678899999999999999999888999998886 79999999999999988876654 57899999999986532
Q ss_pred c-ccccceeecCCCCCCCCceeEEEEec--CCcEEEcccceecccccCccccccchhHHhhhhcCCCccccchhhhhhhh
Q psy3952 81 Q-HLVRGNIYPVPDPNFPFLGVHFTPRM--DGSVWLGPNAVLAFKKEGYRWRDFSVRELFSTLRYPGFWRLGLKYTRYGS 157 (252)
Q Consensus 81 ~-~~~~~~i~~~~~~~~~~~~~~~~~~~--~g~~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (252)
. ..+...+ ..+.|++|.. +|++++|.+.+.. +.+. .++. +..
T Consensus 495 ~~~~l~~v~---------~~~~Yl~P~~~~~g~~~iGat~~~~----~~d~-~~~~---------------------~~~ 539 (689)
T 3pvc_A 495 VLSQLQQVL---------CYDGYLTPVNPANQHHCIGASYQRG----DIAT-DFRL---------------------TEQ 539 (689)
T ss_dssp TGGGCCSEE---------ESSSEECCCBTTTTEEEEECCCEET----BCCC-CCCH---------------------HHH
T ss_pred ccccCCeeE---------eCCceEccccCCCCeEEEEEeccCC----CCCC-CCCH---------------------HHH
Confidence 1 0111111 1125788887 7899999876532 1111 1111 122
Q ss_pred HHHHhhhChhHHHHHHHHhccCCC-----CCCceecCCcceeEeecCCCCcccceEEE----------------------
Q psy3952 158 KEMIMSWFPSMRVNELKQYIEEIE-----AGDIQRGPSGVRAQALSSSGDLVDDFVFH---------------------- 210 (252)
Q Consensus 158 ~~l~~~~~~~~~~~~~~~~~P~l~-----~~~i~~~w~G~rp~~~~~d~~p~~~~~i~---------------------- 210 (252)
. .+++.+.+++|.+. +..+.+.|+|+||.+ ||+.|+.+.+-+
T Consensus 540 ~---------~ll~~l~~~~P~l~~~~~~~~~~~~~w~G~R~~t--~D~lPiiG~~p~~~~~~~~y~~l~~~~~~~~~~~ 608 (689)
T 3pvc_A 540 Q---------ENRERLLRCLPQVSWPQQVDVSDNQARCGVRCAI--RDHLPMVGAVPDYAATLAQYQDLSRRIQHGGESE 608 (689)
T ss_dssp H---------HHHHHHHHHCTTCSGGGGCCCTTCCEEEEEEEEC--TTSCCEEEEEECHHHHHHHSTTHHHHC-------
T ss_pred H---------HHHHHHHHhCCCccccccccccccceeEEEeeec--CCCCcccCcCCCHHHHHHHHHhhhcccccccccc
Confidence 2 23478899999986 345678999999986 898876443322
Q ss_pred --------ecCCeEEEeccCCccccchHHHHHHHHHHHHhh
Q psy3952 211 --------SAGRTLHCRNAPSPAATSSLAIAKHILNELRRE 243 (252)
Q Consensus 211 --------~~~~~~~~~G~~~~G~t~a~~~g~~va~~i~~~ 243 (252)
..+|+|+++|++|+|+++||.+|+.+|++|.+.
T Consensus 609 ~~~~~~~~~~~~l~~a~G~g~~Gl~~ap~~ae~lA~~i~g~ 649 (689)
T 3pvc_A 609 VNDIAVAPVWPELFMVGGLGSRGLCSAPLVAEILAAQMFGE 649 (689)
T ss_dssp -CCCCCCCEEEEEEEEECCTTCHHHHHHHHHHHHHHHHTTC
T ss_pred ccccccCCCCCChHHhhcccccHHHHHHHHHHHHHHHHcCC
Confidence 036999999999999999999999999999754
No 12
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.89 E-value=8.1e-23 Score=192.33 Aligned_cols=192 Identities=12% Similarity=0.076 Sum_probs=142.5
Q ss_pred hhHHHhCCcEEEeCceeEEEEEcCCeEEEEeCCCcEEEcCEEEEcCCCChHHHHHHcCCCCCCceeeeeeEEEEeCCCcc
Q psy3952 2 GEEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQADEMALKSGCSLEPAIVPFRGEYLLLNPAKQ 81 (252)
Q Consensus 2 ~~~a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g~~i~A~~VV~AaG~ws~~l~~~~g~~~~~~~~p~~g~~~~~~~~~~ 81 (252)
.+.++++|++|+++++|++|+.++++|.|+|.+|.++.|+.||+|+|.|+..+.+..+ +|+.|++|+++.++....
T Consensus 424 ~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~i~Ad~VVlAtG~~s~~l~~~~~----lpl~p~rGq~~~~~~~~~ 499 (676)
T 3ps9_A 424 LELAQQQGLQIYYQYQLQNFSRKDDCWLLNFAGDQQATHSVVVLANGHQISRFSQTST----LPVYSVAGQVSHIPTTPE 499 (676)
T ss_dssp HHHHHHTTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECCGGGGGCSTTTTT----CSCEEEEEEEEEEECCTT
T ss_pred HHHHHhCCCEEEeCCeeeEEEEeCCeEEEEECCCCEEECCEEEECCCcchhccccccC----CcceeecCEEEEECCCcc
Confidence 4667889999999999999999999999999876589999999999999988876554 678999999998864311
Q ss_pred -ccccceeecCCCCCCCCceeEEEEec--CCcEEEcccceecccccCccccccchhHHhhhhcCCCccccchhhhhhhhH
Q psy3952 82 -HLVRGNIYPVPDPNFPFLGVHFTPRM--DGSVWLGPNAVLAFKKEGYRWRDFSVRELFSTLRYPGFWRLGLKYTRYGSK 158 (252)
Q Consensus 82 -~~~~~~i~~~~~~~~~~~~~~~~~~~--~g~~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (252)
..+...+ ..+.|++|.. +|++++|.+.+.. +.+. .++. +...
T Consensus 500 ~~~l~~~l---------~~~~Yl~P~~~~~g~~~iG~t~~~~----~~d~-~~~~---------------------~~~~ 544 (676)
T 3ps9_A 500 LAELKQVL---------CYDGYLTPQNPANQHHCIGASYHRG----SEDT-AYSE---------------------DDQQ 544 (676)
T ss_dssp GGGCCSEE---------ESSSEECCCBTTTTEEEEECCCEET----CCCC-CCCH---------------------HHHH
T ss_pred cccCCcee---------ECCeeeccccCCCCeEEEeeccCCC----CCCC-CCCH---------------------HHHH
Confidence 0111111 1125788877 7899999876542 1111 1111 2222
Q ss_pred HHHhhhChhHHHHHHHHhccCCC-----CCCceecCCcceeEeecCCCCcccceEEE----------------------e
Q psy3952 159 EMIMSWFPSMRVNELKQYIEEIE-----AGDIQRGPSGVRAQALSSSGDLVDDFVFH----------------------S 211 (252)
Q Consensus 159 ~l~~~~~~~~~~~~~~~~~P~l~-----~~~i~~~w~G~rp~~~~~d~~p~~~~~i~----------------------~ 211 (252)
.+++.+.+++|.+. +..+.+.|+|+||.+ ||+.|+.+.+-+ .
T Consensus 545 ---------~~l~~l~~~~P~l~~~~~~d~~~~~~~~G~R~~t--~D~lPiiG~~p~~~~~~~~y~~l~~~~~~~~~~~~ 613 (676)
T 3ps9_A 545 ---------QNRQRLIDCFPQAQWAKEVDVSDKEARCGVRCAT--RDHLPMVGNVPDYEATLVEYASLAEQKDEAVSAPV 613 (676)
T ss_dssp ---------HHHHHHHHHSTTCHHHHTCCCTTCCEEEEEEEEC--TTCCCEEEEEECHHHHHHHTTTTTSCCTTCCSCCE
T ss_pred ---------HHHHHHHHhCCCccccccCcccccceEEEEeCcc--CCcCCccCcCCChHHHHHHHHhhhccccccccCCC
Confidence 23477899999986 345678999999986 898775333221 0
Q ss_pred cCCeEEEeccCCccccchHHHHHHHHHHHHhh
Q psy3952 212 AGRTLHCRNAPSPAATSSLAIAKHILNELRRE 243 (252)
Q Consensus 212 ~~~~~~~~G~~~~G~t~a~~~g~~va~~i~~~ 243 (252)
.+|+|+++|++|+|+++||.+|+.+|++|.+.
T Consensus 614 ~~~l~~a~G~g~~Gl~~Ap~~ae~lA~~i~g~ 645 (676)
T 3ps9_A 614 FDDLFMFAALGSRGLCSAPLCAEILAAQMSDE 645 (676)
T ss_dssp EEEEEEEECCTTCHHHHHHHHHHHHHHHHTTC
T ss_pred CCCEeeeecccccHHHHHHHHHHHHHHHHcCC
Confidence 36999999999999999999999999999865
No 13
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=99.89 E-value=8.1e-22 Score=179.49 Aligned_cols=201 Identities=15% Similarity=0.139 Sum_probs=147.8
Q ss_pred ChhHHHhCCcEEEeCceeEEEEEcCCeEEEEe---CCCc--EEEcCEEEEcCCCChHHHHHH-cCCCCCCceeeeeeEEE
Q psy3952 1 MGEEFCELGGEIRLNQQVESFKENPESVTIST---KQGD--HLESSYALVCAGLQADEMALK-SGCSLEPAIVPFRGEYL 74 (252)
Q Consensus 1 l~~~a~~~G~~i~~~~~V~~i~~~~~~~~V~t---~~g~--~i~A~~VV~AaG~ws~~l~~~-~g~~~~~~~~p~~g~~~ 74 (252)
|++.|+++|++++++++|++++.+++.|.|.+ .+|. ++.|+.||||+|+|++.+.+. ++.....++.|.||+++
T Consensus 155 l~~~a~~~Gv~i~~~~~V~~l~~~~~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s~~l~~~~l~~~~~~~i~p~rG~~~ 234 (501)
T 2qcu_A 155 NAQMVVRKGGEVLTRTRATSARRENGLWIVEAEDIDTGKKYSWQARGLVNATGPWVKQFFDDGMHLPSPYGIRLIKGSHI 234 (501)
T ss_dssp HHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTTCCEEEEEESCEEECCGGGHHHHHHHHTCCCCSSCBCCEEEEEE
T ss_pred HHHHHHHcCCEEEcCcEEEEEEEeCCEEEEEEEECCCCCEEEEECCEEEECCChhHHHHHHHhccCCcccccccceeEEE
Confidence 35678899999999999999998877677776 3563 699999999999999999885 55432468999999999
Q ss_pred EeCCCccccccceeecCCCCCCCCceeEEEEecCCcEEEcccceecc-cccCccccccchhHHhhhhcCCCccccchhhh
Q psy3952 75 LLNPAKQHLVRGNIYPVPDPNFPFLGVHFTPRMDGSVWLGPNAVLAF-KKEGYRWRDFSVRELFSTLRYPGFWRLGLKYT 153 (252)
Q Consensus 75 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~iG~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (252)
+++... +.....+++.++ ...+++.|..+|.+++|++..... ++.+. ..+
T Consensus 235 ~~~~~~-~~~~~~~~~~~d----g~~~~~~P~~~g~~~iG~t~~~~~~~~~~~---~~~--------------------- 285 (501)
T 2qcu_A 235 VVPRVH-TQKQAYILQNED----KRIVFVIPWMDEFSIIGTTDVEYKGDPKAV---KIE--------------------- 285 (501)
T ss_dssp EEECSS-SCSCEEEEECTT----SCEEEEEEETTTEEEEECCCEECCSCGGGC---CCC---------------------
T ss_pred EECCCC-CCceEEEeecCC----CCEEEEEEcCCCcEEEcCCCCCCCCCcCCC---CCC---------------------
Confidence 987432 111223344222 346888998888999998865421 11111 101
Q ss_pred hhhhHHHHhhhChhHHHHHHHHhcc-CCCCCCceecCCcceeEeecCCCCc-----ccceEEE--e---cCCeEEEeccC
Q psy3952 154 RYGSKEMIMSWFPSMRVNELKQYIE-EIEAGDIQRGPSGVRAQALSSSGDL-----VDDFVFH--S---AGRTLHCRNAP 222 (252)
Q Consensus 154 ~~~~~~l~~~~~~~~~~~~~~~~~P-~l~~~~i~~~w~G~rp~~~~~d~~p-----~~~~~i~--~---~~~~~~~~G~~ 222 (252)
.+.++. +++.++++|| .+...++.+.|+|+||.+ +|+.| .+++++. . .+|++.++|.
T Consensus 286 ~~~~~~---------l~~~~~~~~p~~l~~~~v~~~~aG~Rp~~--~d~~p~~~~~~~~~~i~~~~~~~~~gl~~i~Gg- 353 (501)
T 2qcu_A 286 ESEINY---------LLNVYNTHFKKQLSRDDIVWTYSGVRPLC--DDESDSPQAITRDYTLDIHDENGKAPLLSVFGG- 353 (501)
T ss_dssp HHHHHH---------HHHHHHHHBSSCCCGGGCCEEEEEEECCB--CCCCSSGGGSCCCCEEEEEEETTEEEEEEEECC-
T ss_pred HHHHHH---------HHHHHHHhcCCCCCcccEEEEEEEEeeec--CCCCCccccCcCceEEEecccCCCCCeEEEeCc-
Confidence 133443 3489999999 898889999999999987 67665 3567776 3 2578887775
Q ss_pred CccccchHHHHHHHHHHHHhhc
Q psy3952 223 SPAATSSLAIAKHILNELRREF 244 (252)
Q Consensus 223 ~~G~t~a~~~g~~va~~i~~~~ 244 (252)
|+|+++.+|+.+++++.+.+
T Consensus 354 --~~t~~~~~Ae~~~~~~~~~~ 373 (501)
T 2qcu_A 354 --KLTTYRKLAEHALEKLTPYY 373 (501)
T ss_dssp --CGGGHHHHHHHHHHHHGGGS
T ss_pred --cccchHHHHHHHHHHHHHhh
Confidence 69999999999999999886
No 14
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=99.89 E-value=1e-23 Score=183.34 Aligned_cols=190 Identities=16% Similarity=0.151 Sum_probs=139.9
Q ss_pred ChhHHHhCCcEEEeCceeEEEEEcCCeEEEEeCCCcEEEcCEEEEcCCCChHHHHHHcCCCCCCceeeeeeEEEEeCCCc
Q psy3952 1 MGEEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQADEMALKSGCSLEPAIVPFRGEYLLLNPAK 80 (252)
Q Consensus 1 l~~~a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g~~i~A~~VV~AaG~ws~~l~~~~g~~~~~~~~p~~g~~~~~~~~~ 80 (252)
|.+.|+++|++|++ ++|++++.. + .+.|+.||||+|+|+..+++ ..++.|.||+++.++++.
T Consensus 148 l~~~~~~~Gv~i~~-~~V~~i~~~----------~-~~~a~~VV~A~G~~s~~l~~------~~~l~p~rg~~~~~~~~~ 209 (351)
T 3g3e_A 148 LTERLTERGVKFFQ-RKVESFEEV----------A-REGADVIVNCTGVWAGALQR------DPLLQPGRGQIMKVDAPW 209 (351)
T ss_dssp HHHHHHHTTCEEEE-CCCCCHHHH----------H-HTTCSEEEECCGGGGGGTSC------CTTCEEEEEEEEEEECTT
T ss_pred HHHHHHHCCCEEEE-EEeCCHHHh----------h-cCCCCEEEECCCcChHhhcC------CCceeecCCcEEEEeCCC
Confidence 35678889999998 899887532 2 36899999999999988742 378899999999987531
Q ss_pred cccccceeecCCCCCCCCceeEEEEecCCcEEEcccceecccccCccccccchhHHhhhhcCCCccccchhhhhhhhHHH
Q psy3952 81 QHLVRGNIYPVPDPNFPFLGVHFTPRMDGSVWLGPNAVLAFKKEGYRWRDFSVRELFSTLRYPGFWRLGLKYTRYGSKEM 160 (252)
Q Consensus 81 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 160 (252)
++..++...........+|++|..+ ++++|++.+.. +++. ..+. +.++
T Consensus 210 ---~~~~~~~~~~~~~~~~~~y~~p~~~-~~~iGg~~~~~----~~~~-~~~~---------------------~~~~-- 257 (351)
T 3g3e_A 210 ---MKHFILTHDPERGIYNSPYIIPGTQ-TVTLGGIFQLG----NWSE-LNNI---------------------QDHN-- 257 (351)
T ss_dssp ---CCSEEEECCTTTCTTCSCEEEECSS-CEEEECCCEET----CCCC-SCCH---------------------HHHH--
T ss_pred ---cceEEEeccccCCCCceeEEEeCCC-cEEEeeeeecC----CCCC-CCCH---------------------HHHH--
Confidence 3333432211011123578899876 89999876542 1111 1011 2233
Q ss_pred HhhhChhHHHHHHHHhccCCCCCCceecCCcceeEeecCCCCcccceEEEec---CCeEEEeccCCccccchHHHHHHHH
Q psy3952 161 IMSWFPSMRVNELKQYIEEIEAGDIQRGPSGVRAQALSSSGDLVDDFVFHSA---GRTLHCRNAPSPAATSSLAIAKHIL 237 (252)
Q Consensus 161 ~~~~~~~~~~~~~~~~~P~l~~~~i~~~w~G~rp~~~~~d~~p~~~~~i~~~---~~~~~~~G~~~~G~t~a~~~g~~va 237 (252)
.+++.+.++||.|...++.+.|+|+||++ || .|+.+++++.. +|+|+++|++|+|+|+||++|+.++
T Consensus 258 -------~l~~~~~~~~P~l~~~~i~~~w~G~r~~t--~D-~p~~~~~ig~~~~~~~~~~~~G~~g~G~~~ap~~g~~la 327 (351)
T 3g3e_A 258 -------TIWEGCCRLEPTLKNARIIGERTGFRPVR--PQ-IRLEREQLRTGPSNTEVIHNYGHGGYGLTIHWGCALEAA 327 (351)
T ss_dssp -------HHHHHHHHHCGGGGGCEEEEEEEEEEEEC--SS-CEEEEEEECCSSSCEEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred -------HHHHHHHHhCCCccCCcEeeeeEeeCCCC--CC-ccceeeeccCCCCCCeEEEEeCCCcchHhhhHHHHHHHH
Confidence 33488999999999899999999999987 88 77666677754 6999999999999999999999999
Q ss_pred HHHHhhccccccc
Q psy3952 238 NELRREFKLDELS 250 (252)
Q Consensus 238 ~~i~~~~~~~~~~ 250 (252)
++|.+.+..++|+
T Consensus 328 ~li~~~~~~~~~~ 340 (351)
T 3g3e_A 328 KLFGRILEEKKLS 340 (351)
T ss_dssp HHHHHHHHHTTCC
T ss_pred HHHHHHHHhcccc
Confidence 9999988765543
No 15
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=99.88 E-value=8.7e-22 Score=181.87 Aligned_cols=202 Identities=13% Similarity=0.133 Sum_probs=141.7
Q ss_pred hhHHHhCCcEEEeCceeEEEEEcCCe-EEEE-----eCCCcEEEcCEEEEcCCCChHHHHHHcCCCCC-CceeeeeeEEE
Q psy3952 2 GEEFCELGGEIRLNQQVESFKENPES-VTIS-----TKQGDHLESSYALVCAGLQADEMALKSGCSLE-PAIVPFRGEYL 74 (252)
Q Consensus 2 ~~~a~~~G~~i~~~~~V~~i~~~~~~-~~V~-----t~~g~~i~A~~VV~AaG~ws~~l~~~~g~~~~-~~~~p~~g~~~ 74 (252)
++.|+++|++|+++++|+++.+++++ |.|. |+++.++.|+.||||+|+|++.+.++.|.... .++.|+||+++
T Consensus 195 ~~~a~~~Ga~i~~~t~V~~l~~~~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws~~l~~~~g~~~~~~~i~p~rG~~l 274 (571)
T 2rgh_A 195 IKKAAEDGAYLVSKMKAVGFLYEGDQIVGVKARDLLTDEVIEIKAKLVINTSGPWVDKVRNLNFTRPVSPKMRPTKGIHL 274 (571)
T ss_dssp HHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTCCEEEEEBSCEEECCGGGHHHHHTTCCSSCCCCCBCCEEEEEE
T ss_pred HHHHHHcCCeEEeccEEEEEEEeCCEEEEEEEEEcCCCCEEEEEcCEEEECCChhHHHHHHhhccCccCceeeccceEEE
Confidence 46788999999999999999988776 4455 33333699999999999999999988876423 67999999999
Q ss_pred EeCCCccccccceeecCCCCCCCCceeEEEEecCCcEEEcccceecc-cccCccccccchhHHhhhhcCCCccccchhhh
Q psy3952 75 LLNPAKQHLVRGNIYPVPDPNFPFLGVHFTPRMDGSVWLGPNAVLAF-KKEGYRWRDFSVRELFSTLRYPGFWRLGLKYT 153 (252)
Q Consensus 75 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~iG~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (252)
+++....+.....+++.+.. ....+|+.|. +|.+++|++.+... +..+. ..+
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~--dgr~~~~~P~-~~~~~iG~t~~~~~~~~~~~---~~~--------------------- 327 (571)
T 2rgh_A 275 VVDAKKLPVPQPTYFDTGKQ--DGRMVFAIPR-ENKTYFGTTDTDYQGDFTDP---KVT--------------------- 327 (571)
T ss_dssp EEEGGGSCCSSCEEEECSSS--SSCEEEEEEE-TTEEEECCCCEECCSCSSSC---CCC---------------------
T ss_pred EeccccCCCCcEEEEeccCC--CCcEEEEEEc-CCeEEEcCCCcCCCCCcCCC---CCC---------------------
Confidence 99753211112223332111 1345788886 58899998865421 11111 101
Q ss_pred hhhhHHHHhhhChhHHHHHHHHhccC--CCCCCceecCCcceeEeecCCCC-----cccceEEEec-CCeEEEeccCCcc
Q psy3952 154 RYGSKEMIMSWFPSMRVNELKQYIEE--IEAGDIQRGPSGVRAQALSSSGD-----LVDDFVFHSA-GRTLHCRNAPSPA 225 (252)
Q Consensus 154 ~~~~~~l~~~~~~~~~~~~~~~~~P~--l~~~~i~~~w~G~rp~~~~~d~~-----p~~~~~i~~~-~~~~~~~G~~~~G 225 (252)
.++++.+ ++.+.++||. +...+|.+.|+|+||++ +|+. ..++++++.. +|+++++|+.
T Consensus 328 ~~~~~~l---------l~~~~~~~P~~~l~~~~v~~~waG~Rp~~--~d~~~~~~~~~r~~~i~~~~~gl~~v~GGk--- 393 (571)
T 2rgh_A 328 QEDVDYL---------LDVINHRYPEANITLADIEASWAGLRPLL--IGNSGSPSTISRGSSLEREPDGLLTLSGGK--- 393 (571)
T ss_dssp HHHHHHH---------HHHHHHHSTTTCCCGGGCCEEEEEEECCB--CC-----------EEEEECTTSCEEEEECC---
T ss_pred HHHHHHH---------HHHHHHhcCccCCchhceeEEeEEeeecc--CCCCCCcccCCCCcEEecCCCCeEEEeCcc---
Confidence 1334443 4899999997 47788999999999997 5542 2356777654 7999888754
Q ss_pred ccchHHHHHHHHHHHHhhc
Q psy3952 226 ATSSLAIAKHILNELRREF 244 (252)
Q Consensus 226 ~t~a~~~g~~va~~i~~~~ 244 (252)
+|+++.+|+.+++++.+.+
T Consensus 394 ~Tt~r~~Ae~~~~~i~~~l 412 (571)
T 2rgh_A 394 ITDYRKMAEGALRLIRQLL 412 (571)
T ss_dssp GGGHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHh
Confidence 9999999999999999987
No 16
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.88 E-value=2.6e-22 Score=179.41 Aligned_cols=205 Identities=11% Similarity=0.073 Sum_probs=135.6
Q ss_pred ChhHHHhCCcEEEeCc---eeEEEEEcCCeEE-EEeCCCcEEEcCEEEEcCCCChHHHHHHcCCCCCCceeeeeeEEEEe
Q psy3952 1 MGEEFCELGGEIRLNQ---QVESFKENPESVT-ISTKQGDHLESSYALVCAGLQADEMALKSGCSLEPAIVPFRGEYLLL 76 (252)
Q Consensus 1 l~~~a~~~G~~i~~~~---~V~~i~~~~~~~~-V~t~~g~~i~A~~VV~AaG~ws~~l~~~~g~~~~~~~~p~~g~~~~~ 76 (252)
|.+.++++|++|++++ +|++|..++++|. |+|.+|.++.||.||+|+|+|+..|+. + ..++.|..++...+
T Consensus 167 L~~~a~~~Gv~i~~~t~~~~V~~i~~~~~~v~gV~t~~G~~i~Ad~VV~AtG~~s~~l~~-l----~~~~~p~~~~~~~~ 241 (438)
T 3dje_A 167 AAREAQRMGVKFVTGTPQGRVVTLIFENNDVKGAVTADGKIWRAERTFLCAGASAGQFLD-F----KNQLRPTAWTLVHI 241 (438)
T ss_dssp HHHHHHHTTCEEEESTTTTCEEEEEEETTEEEEEEETTTEEEECSEEEECCGGGGGGTSC-C----TTCCEEEEEEEEEE
T ss_pred HHHHHHhcCCEEEeCCcCceEEEEEecCCeEEEEEECCCCEEECCEEEECCCCChhhhcC-c----ccceeeEEEEEEEE
Confidence 3567888999999999 9999999888887 999998679999999999999998865 3 24566765554443
Q ss_pred CCCccc--cc-cceeecCCCCCCCCceeEEEEecC-CcEEEcccceeccccc---CccccccchhHHhhhhcCCCccccc
Q psy3952 77 NPAKQH--LV-RGNIYPVPDPNFPFLGVHFTPRMD-GSVWLGPNAVLAFKKE---GYRWRDFSVRELFSTLRYPGFWRLG 149 (252)
Q Consensus 77 ~~~~~~--~~-~~~i~~~~~~~~~~~~~~~~~~~~-g~~~iG~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (252)
...... .. ...++.. ...++|+.|..+ |.+++|.......... .....+.+... ..
T Consensus 242 ~l~~~~~~~~~~~p~~~~-----~~~~~~~~p~~~~~~l~i~~~~~g~~~~~~~~~~~~~~~p~~~-------~~----- 304 (438)
T 3dje_A 242 ALKPEERALYKNIPVIFN-----IERGFFFEPDEERGEIKICDEHPGYTNMVQSADGTMMSIPFEK-------TQ----- 304 (438)
T ss_dssp ECCGGGHHHHTTCCEEEE-----TTTEEECSCCTTTCEEEEEECCSCEECEEECTTCCEEECCCCC-------SS-----
T ss_pred EcChHHhhhhcCCCEEEE-----CCCceecCCCCCCCeEEEEeCCCCccCCccCCCcccccCCccc-------cc-----
Confidence 321100 01 1111111 134677777644 4577752110000000 00000000000 00
Q ss_pred hhhhhhhhHHHHhhhChhHHHHHHHHhccCCCCCCceecCCcceeEeecCCCCcccceEEEec---CCeEEEeccCCccc
Q psy3952 150 LKYTRYGSKEMIMSWFPSMRVNELKQYIEEIEAGDIQRGPSGVRAQALSSSGDLVDDFVFHSA---GRTLHCRNAPSPAA 226 (252)
Q Consensus 150 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~P~l~~~~i~~~w~G~rp~~~~~d~~p~~~~~i~~~---~~~~~~~G~~~~G~ 226 (252)
...+..+ .+.+.+.++||.|+..++.+.|+|+||.+ ||+.| +|+.. +|+|+++|++|+||
T Consensus 305 --~~~~~~~---------~l~~~~~~~~P~l~~~~~~~~~~g~~~~t--~D~~p----iig~~p~~~~l~~a~G~~g~G~ 367 (438)
T 3dje_A 305 --IPKEAET---------RVRALLKETMPQLADRPFSFARICWCADT--ANREF----LIDRHPQYHSLVLGCGASGRGF 367 (438)
T ss_dssp --CBHHHHH---------HHHHHHHHHCGGGTTCCCSEEEEEEEEEC--TTSCC----EEEECSSCTTEEEEECCTTCCG
T ss_pred --CCHHHHH---------HHHHHHHHhCcccccCCcceeeEEEeCcC--CCCCe----EEeecCCCCCEEEEECCCCcch
Confidence 0002222 34478899999999999999999999986 88755 57774 69999999999999
Q ss_pred cchHHHHHHHHHHHHhhc
Q psy3952 227 TSSLAIAKHILNELRREF 244 (252)
Q Consensus 227 t~a~~~g~~va~~i~~~~ 244 (252)
+++|++|+.+|++|.+..
T Consensus 368 ~~ap~~g~~la~~i~g~~ 385 (438)
T 3dje_A 368 KYLPSIGNLIVDAMEGKV 385 (438)
T ss_dssp GGTTTHHHHHHHHHHTCC
T ss_pred hhhHHHHHHHHHHHhCCC
Confidence 999999999999998764
No 17
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=99.87 E-value=4.2e-22 Score=176.66 Aligned_cols=199 Identities=12% Similarity=0.083 Sum_probs=133.9
Q ss_pred hhHHHhCCcEEEeCceeE---------EEEEcCCeEEEEeCCCcEEEcCEEEEcCCCChHHHHH-HcCCCCCCceeeeee
Q psy3952 2 GEEFCELGGEIRLNQQVE---------SFKENPESVTISTKQGDHLESSYALVCAGLQADEMAL-KSGCSLEPAIVPFRG 71 (252)
Q Consensus 2 ~~~a~~~G~~i~~~~~V~---------~i~~~~~~~~V~t~~g~~i~A~~VV~AaG~ws~~l~~-~~g~~~~~~~~p~~g 71 (252)
.+.++++|++++++++|+ +++.++++|.|.|++| ++.||.||+|+|+|+..|.+ ++|+ ..++.|.+|
T Consensus 179 ~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~~~~v~v~~~~g-~i~a~~VV~A~G~~s~~l~~~~~g~--~~~~~~~~g 255 (405)
T 3c4n_A 179 AQQAIGQGAGLLLNTRAELVPGGVRLHRLTVTNTHQIVVHETR-QIRAGVIIVAAGAAGPALVEQGLGL--HTRHGRAYR 255 (405)
T ss_dssp HHHHHTTTCEEECSCEEEEETTEEEEECBCC-------CBCCE-EEEEEEEEECCGGGHHHHHHHHHCC--CCCCEEEEE
T ss_pred HHHHHHCCCEEEcCCEEEeccccccccceEeeCCeEEEEECCc-EEECCEEEECCCccHHHHHHHhcCC--CCCccccee
Confidence 466788899999999999 8887777788888888 89999999999999999998 8887 467899999
Q ss_pred EEEEeCCCccccccceeecCCCCCCCCceeEEEEecCCcEEEcccceecccccCccccccchhHHhhhhcCCCccccchh
Q psy3952 72 EYLLLNPAKQHLVRGNIYPVPDPNFPFLGVHFTPRMDGSVWLGPNAVLAFKKEGYRWRDFSVRELFSTLRYPGFWRLGLK 151 (252)
Q Consensus 72 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (252)
+++.+..+. ......++ ..++|++|..+|.+++|++.... ..++....-++... + +..
T Consensus 256 ~~~~~~~~~-~~~~~~~~--------~~~~y~~p~~~g~~~~G~t~~~~--~~~~~~~~~~~~~~----~-~~~------ 313 (405)
T 3c4n_A 256 QFPRLDLLS-GAQTPVLR--------ASGLTLRPQNGGYTLVPAIHHRD--PHGYHPAGGSLTGV----P-TGL------ 313 (405)
T ss_dssp ECCEECSCC-CTTCCEEE--------ETTEEEEEETTEEEEECCCCSCB--CSSCCCCCCCBTTB----C-CSS------
T ss_pred EEEEECCCC-ccCCCeEE--------CCcEEEEEcCCCeEEEecccccc--ccCcCccccccccc----c-cCC------
Confidence 988876431 11112221 23578899888888898763210 01111000000000 0 000
Q ss_pred hhhhhhHHHHhhhChhHHHHHHHHhccCCCCCC---------ceecCCcceeEeecCCCCcccceEEEec-CCeEEEecc
Q psy3952 152 YTRYGSKEMIMSWFPSMRVNELKQYIEEIEAGD---------IQRGPSGVRAQALSSSGDLVDDFVFHSA-GRTLHCRNA 221 (252)
Q Consensus 152 ~~~~~~~~l~~~~~~~~~~~~~~~~~P~l~~~~---------i~~~w~G~rp~~~~~d~~p~~~~~i~~~-~~~~~~~G~ 221 (252)
..+.++. +.+. .++||.|...+ +.+.|+|+||++ +|+.| +|+.. +|+|+++|+
T Consensus 314 -~~~~~~~---------l~~~-~~~~P~l~~~~~~~~r~~~~i~~~w~G~r~~t--~D~~P----~ig~~~~gl~~a~G~ 376 (405)
T 3c4n_A 314 -RRELLED---------LVGL-MDAVPALAGEGLELGRSSADVPGAWLALPGGR--PDAPP----QAEELAPGLHLLLGG 376 (405)
T ss_dssp -CHHHHHH---------HHHH-TTTCGGGGSSCBCCCSSGGGSCEEEEEEGGGC--TTCCC----EEEEEETTEEEEECC
T ss_pred -CHHHHHH---------HHHH-HHhCCCccccCccccccccceeeEEEeecCcC--CCCCC----EecccCCCeEEEEcc
Confidence 0012222 2233 38999987654 888999999986 88866 46654 799999999
Q ss_pred CCccccchHHHHHHHHHHHHhh
Q psy3952 222 PSPAATSSLAIAKHILNELRRE 243 (252)
Q Consensus 222 ~~~G~t~a~~~g~~va~~i~~~ 243 (252)
+++ +++||++|+.++++|.+.
T Consensus 377 ~g~-~~~ap~~a~~la~~i~~~ 397 (405)
T 3c4n_A 377 PLA-DTLGLAAAHELAQRVSAS 397 (405)
T ss_dssp TTH-HHHHHHHHHHHHHHHHHH
T ss_pred CcH-HHHHHHHHHHHHHHHhCc
Confidence 876 599999999999999865
No 18
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=99.86 E-value=8.2e-22 Score=171.99 Aligned_cols=183 Identities=18% Similarity=0.202 Sum_probs=133.2
Q ss_pred ChhHHHhCCcEEEeCceeEEEEEcCCeEEEEeCCCcEEEcCEEEEcCCCChHHHHHHcCCCCCCceeeeeeEEEEeCCCc
Q psy3952 1 MGEEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQADEMALKSGCSLEPAIVPFRGEYLLLNPAK 80 (252)
Q Consensus 1 l~~~a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g~~i~A~~VV~AaG~ws~~l~~~~g~~~~~~~~p~~g~~~~~~~~~ 80 (252)
|++.|+++|++|++ ++|++++.+ - + .|+.||+|+|+|+..++.+ ...++.|++|+++.++++.
T Consensus 148 l~~~~~~~G~~i~~-~~v~~l~~~----------~-~-~a~~VV~A~G~~s~~l~~~----~~~~~~p~rg~~~~~~~~~ 210 (363)
T 1c0p_A 148 LARELQKLGATFER-RTVTSLEQA----------F-D-GADLVVNATGLGAKSIAGI----DDQAAEPIRGQTVLVKSPC 210 (363)
T ss_dssp HHHHHHHTTCEEEE-CCCSBGGGT----------C-S-SCSEEEECCGGGGGTSBTT----CCTTEEEEEEEEEEEECCC
T ss_pred HHHHHHHCCCEEEE-EEcccHhhc----------C-c-CCCEEEECCCcchhhccCc----ccCCccccCCeEEEEeCCc
Confidence 35678899999998 999988643 1 2 8999999999999887644 2578999999999886532
Q ss_pred cccccceeecCCCCCCCCceeEEEEecCCcEEEcccceecccccCccccccchhHHhhhhcCCCccccchhhhhhhhHHH
Q psy3952 81 QHLVRGNIYPVPDPNFPFLGVHFTPRMDGSVWLGPNAVLAFKKEGYRWRDFSVRELFSTLRYPGFWRLGLKYTRYGSKEM 160 (252)
Q Consensus 81 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 160 (252)
. .. .++.... ..+.|++|..+|++++|++.+.. +++. ..+. +.++
T Consensus 211 -~-~~--~~~~~~~---~~~~y~~p~~~g~~~iG~t~~~~----~~~~-~~~~---------------------~~~~-- 255 (363)
T 1c0p_A 211 -K-RC--TMDSSDP---ASPAYIIPRPGGEVICGGTYGVG----DWDL-SVNP---------------------ETVQ-- 255 (363)
T ss_dssp -C-CC--EEECSCT---TCCEEEEEETTTEEEEECCCEET----CCCC-SCCH---------------------HHHH--
T ss_pred -c-cc--eEeeccC---CCcEEEEEcCCCEEEEEeeeccC----CCCC-CCCH---------------------HHHH--
Confidence 1 11 1222111 12478899888999999886542 1111 1011 2233
Q ss_pred HhhhChhHHHHHHHHhccCC------CCCCceecCCcceeEeecCCCCcccceEEEe--------------------c--
Q psy3952 161 IMSWFPSMRVNELKQYIEEI------EAGDIQRGPSGVRAQALSSSGDLVDDFVFHS--------------------A-- 212 (252)
Q Consensus 161 ~~~~~~~~~~~~~~~~~P~l------~~~~i~~~w~G~rp~~~~~d~~p~~~~~i~~--------------------~-- 212 (252)
.+++.+.+++|.+ +..++.+.|+|+||++ +|+.|+.+..++. .
T Consensus 256 -------~l~~~~~~~~P~l~~~~~~~~~~i~~~w~G~rp~t--~d~~piig~~~~~~~~~~~~~~d~~~~~g~~p~~~~ 326 (363)
T 1c0p_A 256 -------RILKHCLRLDPTISSDGTIEGIEVLRHNVGLRPAR--RGGPRVEAERIVLPLDRTKSPLSLGRGSARAAKEKE 326 (363)
T ss_dssp -------HHHHHHHHHCGGGSSSSSGGGCEEEEEEEEEEEEE--TTSCEEEEEEEEESCCTTTCTTCSSCTTCCCSCCEE
T ss_pred -------HHHHHHHHhCccccCCcccccceEeeceEEECCCC--CCCceeEEEecccccccccCcccccccccccccccc
Confidence 3448899999998 4578899999999987 8887754432220 1
Q ss_pred CCeEEEeccCCccccchHHHHHHHHHHHHhhc
Q psy3952 213 GRTLHCRNAPSPAATSSLAIAKHILNELRREF 244 (252)
Q Consensus 213 ~~~~~~~G~~~~G~t~a~~~g~~va~~i~~~~ 244 (252)
+|+|+++|++|+|+++||++|+.++++|.+++
T Consensus 327 ~~~~~a~G~~g~G~~~a~~~g~~~a~li~~~l 358 (363)
T 1c0p_A 327 VTLVHAYGFSSAGYQQSWGAAEDVAQLVDEAF 358 (363)
T ss_dssp EEEEEEECCTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEecCCCCcchheeccHHHHHHHHHHHHH
Confidence 68999999999999999999999999999875
No 19
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=99.85 E-value=4.4e-20 Score=177.38 Aligned_cols=213 Identities=15% Similarity=0.156 Sum_probs=142.6
Q ss_pred ChhHHHhCCcEEEeCceeEEEEEcCCeE-EEEeCCCcEEEcCEEEEcCCCChHHHHHHcCCCCCCceeeeeeEEEEeCCC
Q psy3952 1 MGEEFCELGGEIRLNQQVESFKENPESV-TISTKQGDHLESSYALVCAGLQADEMALKSGCSLEPAIVPFRGEYLLLNPA 79 (252)
Q Consensus 1 l~~~a~~~G~~i~~~~~V~~i~~~~~~~-~V~t~~g~~i~A~~VV~AaG~ws~~l~~~~g~~~~~~~~p~~g~~~~~~~~ 79 (252)
|++.|+++|++|+++++|++|+.+++++ .|.|++| +++||.||+|+|+|+..+++++|. ++|+.|++++++.+.+.
T Consensus 157 L~~~a~~~Gv~i~~~t~V~~i~~~~~~v~~V~t~~G-~i~Ad~VV~AaG~~s~~l~~~~g~--~~pl~p~~g~~~~~~~~ 233 (830)
T 1pj5_A 157 LIKRTESAGVTYRGSTTVTGIEQSGGRVTGVQTADG-VIPADIVVSCAGFWGAKIGAMIGM--AVPLLPLAHQYVKTTPV 233 (830)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTE-EEECSEEEECCGGGHHHHHHTTTC--CCCCEEEEEEEEEESCC
T ss_pred HHHHHHHcCCEEECCceEEEEEEeCCEEEEEEECCc-EEECCEEEECCccchHHHHHHhCC--CccceeceeEEEEEecC
Confidence 3567889999999999999999887775 5899999 999999999999999999999987 58899999999998753
Q ss_pred cccccccee----ecCCCCCCCCceeEEEEecCCcEEEcccceec--ccccCccccccchhHHhhhhcCCCccccchhhh
Q psy3952 80 KQHLVRGNI----YPVPDPNFPFLGVHFTPRMDGSVWLGPNAVLA--FKKEGYRWRDFSVRELFSTLRYPGFWRLGLKYT 153 (252)
Q Consensus 80 ~~~~~~~~i----~~~~~~~~~~~~~~~~~~~~g~~~iG~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (252)
. ....... ...|........+|++|.. +++++|.+.... ..++....+ .+... +....+...+ .+
T Consensus 234 ~-~~~~~~~~~~~~~~pv~~~~~~~~y~r~~~-~~l~iG~~~~~~~~~~~~~~~~t--~~~~~-~~~~~~~~~~----~~ 304 (830)
T 1pj5_A 234 P-AQQGRNDQPNGARLPILRHQDQDLYYREHG-DRYGIGSYAHRPMPVDVDTLGAY--APETV-SEHHMPSRLD----FT 304 (830)
T ss_dssp G-GGTTTSCTTTCCCSCEEEEGGGTEEEEEET-TEEEEEECCSCCCBCCGGGSCCC--CGGGC-BTTBSTTEEC----CC
T ss_pred c-ccccccccccCCCCCeEEcCCCCEEEEEeC-CeEEEeccCCCCcccCccccccc--ccccc-cccccccccC----CC
Confidence 1 1100000 0001000012346777764 478888653210 000000000 00000 0000000000 01
Q ss_pred hhhhHHHHhhhChhHHHHHHHHhccCCCCCCceecCCcceeEeecCCCCcccceEEEec---CCeEEEeccCCccccchH
Q psy3952 154 RYGSKEMIMSWFPSMRVNELKQYIEEIEAGDIQRGPSGVRAQALSSSGDLVDDFVFHSA---GRTLHCRNAPSPAATSSL 230 (252)
Q Consensus 154 ~~~~~~l~~~~~~~~~~~~~~~~~P~l~~~~i~~~w~G~rp~~~~~d~~p~~~~~i~~~---~~~~~~~G~~~~G~t~a~ 230 (252)
.+.++ .+++.+.+++|.|...++.+.|+|+||++ ||+.| +|++. +|+|+++|+ |+++||
T Consensus 305 ~~~~~---------~l~~~~~~~~P~l~~~~i~~~w~G~r~~t--~D~~P----iIG~~p~~~gl~va~G~---G~~~ap 366 (830)
T 1pj5_A 305 LEDFL---------PAWEATKQLLPALADSEIEDGFNGIFSFT--PDGGP----LLGESKELDGFYVAEAV---WVTHSA 366 (830)
T ss_dssp HHHHH---------HHHHHHHHHCGGGGGSCEEEEEEEEEEEC--TTSCC----EEEECSSSBTEEEEESC---CGGGHH
T ss_pred HHHHH---------HHHHHHHHhCccccccCcceEEEeecccC--CCCCe----eeccCCCCCCEEEEECc---hHHhhH
Confidence 12233 34588999999999999999999999986 88865 57764 699999986 799999
Q ss_pred HHHHHHHHHHHhh
Q psy3952 231 AIAKHILNELRRE 243 (252)
Q Consensus 231 ~~g~~va~~i~~~ 243 (252)
++|+.+|++|.+.
T Consensus 367 ~~g~~la~li~~~ 379 (830)
T 1pj5_A 367 GVAKAMAELLTTG 379 (830)
T ss_dssp HHHHHHHHHHHHS
T ss_pred HHHHHHHHHHhCC
Confidence 9999999999865
No 20
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=98.88 E-value=2.2e-08 Score=87.37 Aligned_cols=198 Identities=7% Similarity=0.008 Sum_probs=108.4
Q ss_pred hhHHHhCCcEEEeCceeEEEEEcCCeEE-EEe---CCCcEEEcCEEEEcCCCChHHHHHHcCCCC-CC-ceeeeeeEEEE
Q psy3952 2 GEEFCELGGEIRLNQQVESFKENPESVT-IST---KQGDHLESSYALVCAGLQADEMALKSGCSL-EP-AIVPFRGEYLL 75 (252)
Q Consensus 2 ~~~a~~~G~~i~~~~~V~~i~~~~~~~~-V~t---~~g~~i~A~~VV~AaG~ws~~l~~~~g~~~-~~-~~~p~~g~~~~ 75 (252)
.+.|++.|++++.+++|++++.+++++. |.+ +++.+++||.||.|+|.|+ .+.+++|... .. +.....+..+.
T Consensus 109 ~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~a~~vV~A~G~~s-~~~~~~g~~~~~~~~~~~~~~~~~~ 187 (397)
T 3cgv_A 109 AALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRAKMVIAADGFES-EFGRWAGLKSVILARNDIISALQYR 187 (397)
T ss_dssp HHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECCCTTC-HHHHHHTCCTTCCCGGGEEEEEEEE
T ss_pred HHHHHhCCCEEEECCEEEEEEEeCCEEEEEEEEECCeEEEEEcCEEEECCCcch-HhHHhcCCCccCCChhheeEEEEEE
Confidence 4567788999999999999999888876 765 3445799999999999999 6778888642 11 11112222222
Q ss_pred eC-CCccccccceeecCCCCCCCCceeEEEEecCCcEEEcccceecccccCccccccchhHHhhhhcCCCccccchhhhh
Q psy3952 76 LN-PAKQHLVRGNIYPVPDPNFPFLGVHFTPRMDGSVWLGPNAVLAFKKEGYRWRDFSVRELFSTLRYPGFWRLGLKYTR 154 (252)
Q Consensus 76 ~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (252)
+. ....+......+.. ..+..-.++.|..++++.+|-..... ... . .
T Consensus 188 ~~~~~~~~~~~~~~~~~---~~~~g~~~~~P~~~~~~~vg~~~~~~----~~~--~--~--------------------- 235 (397)
T 3cgv_A 188 MINVDVDPDYTDFYLGS---IAPAGYIWVFPKGEGMANVGIGSSIN----WIH--N--R--------------------- 235 (397)
T ss_dssp EESCCCCTTEEEEECST---TSTTEEEEEEEEETTEEEEEEEEETT----TCS--C--H---------------------
T ss_pred eccCCCCCCcEEEEeCC---cCCCceEEEEECCCCeEEEEEEeccc----ccc--C--C---------------------
Confidence 22 11111110111110 01122345677777777776432210 100 0 0
Q ss_pred hhhHHHHhhhChhHHHHHHHHhccCCCCCCceecCCcceeEeecCCCCccc-c-eEEEecCCeEEEeccCCccccchHHH
Q psy3952 155 YGSKEMIMSWFPSMRVNELKQYIEEIEAGDIQRGPSGVRAQALSSSGDLVD-D-FVFHSAGRTLHCRNAPSPAATSSLAI 232 (252)
Q Consensus 155 ~~~~~l~~~~~~~~~~~~~~~~~P~l~~~~i~~~w~G~rp~~~~~d~~p~~-~-~~i~~~~~~~~~~G~~~~G~t~a~~~ 232 (252)
.... ..++...+.+|.+...++.+.|.|..|+.. +-..... . +++|.+.+. ...+.|.|+.+|..-
T Consensus 236 ~~~~---------~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~~~~~~~v~liGDAa~~--~~P~~G~G~~~a~~~ 303 (397)
T 3cgv_A 236 FELK---------NYLDRFIENHPGLKKGQDIQLVTGGVSVSK-VKMPITMPGLMLVGDAARL--IDPITGGGIANAIVS 303 (397)
T ss_dssp HHHH---------HHHHHHHHTCHHHHTSEEEEEEEEEEECCC-CCSCCEETTEEECGGGGTC--SCTTTCCCHHHHHHH
T ss_pred CCHH---------HHHHHHHHhCcCCCCCeEEeeeeeeeecCC-CccceeeCCEEEEEccccC--CCCCCCCCHHHHHHH
Confidence 0011 111333444566666777788888777531 1100000 0 111211222 233678999999999
Q ss_pred HHHHHHHHHhhc
Q psy3952 233 AKHILNELRREF 244 (252)
Q Consensus 233 g~~va~~i~~~~ 244 (252)
|..+++.|.+.+
T Consensus 304 a~~la~~l~~~~ 315 (397)
T 3cgv_A 304 GMYAAQVTKEAI 315 (397)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 998888877644
No 21
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=98.58 E-value=1.2e-07 Score=83.60 Aligned_cols=59 Identities=17% Similarity=0.246 Sum_probs=49.6
Q ss_pred hhHHHhCCcEEEeCceeEEEEEcCCeE--EEEeCCCc--EEEcCEEEEcCCCChHHHHHHcCCC
Q psy3952 2 GEEFCELGGEIRLNQQVESFKENPESV--TISTKQGD--HLESSYALVCAGLQADEMALKSGCS 61 (252)
Q Consensus 2 ~~~a~~~G~~i~~~~~V~~i~~~~~~~--~V~t~~g~--~i~A~~VV~AaG~ws~~l~~~~g~~ 61 (252)
.+.|++.|++++.+++|++++.+++++ .|.+.+|. +++||.||+|+|.|+ .+.+++|..
T Consensus 113 ~~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~~~g~~~~~~a~~vV~A~G~~s-~l~~~~g~~ 175 (421)
T 3nix_A 113 ADEAARQGVDVEYEVGVTDIKFFGTDSVTTIEDINGNKREIEARFIIDASGYGR-VIPRMFGLD 175 (421)
T ss_dssp HHHHHHHTCEEECSEEEEEEEEETTEEEEEEEETTSCEEEEEEEEEEECCGGGC-HHHHHTTCE
T ss_pred HHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCCEEEEEcCEEEECCCCch-hhHHhcCCC
Confidence 456778899999999999999887764 57788885 599999999999999 677888763
No 22
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.28 E-value=3e-05 Score=69.09 Aligned_cols=58 Identities=14% Similarity=-0.023 Sum_probs=46.2
Q ss_pred hhHHHhCCcEEEeCceeEEEEEcCCeEE-EE--eC-CCc--EEEcCEEEEcCCCChHHHHHHcCC
Q psy3952 2 GEEFCELGGEIRLNQQVESFKENPESVT-IS--TK-QGD--HLESSYALVCAGLQADEMALKSGC 60 (252)
Q Consensus 2 ~~~a~~~G~~i~~~~~V~~i~~~~~~~~-V~--t~-~g~--~i~A~~VV~AaG~ws~~l~~~~g~ 60 (252)
.+.|++.|++++.+++|+++..+++++. |. +. +|. +++||.||.|.|.++. +.+.+|.
T Consensus 107 ~~~a~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s~-vr~~l~~ 170 (453)
T 3atr_A 107 LKEAQDRGVEIWDLTTAMKPIFEDGYVKGAVLFNRRTNEELTVYSKVVVEATGYSRS-FRSKLPP 170 (453)
T ss_dssp HHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTTEEEEEECSEEEECCGGGCT-TGGGSCT
T ss_pred HHHHHHcCCEEEeCcEEEEEEEECCEEEEEEEEEcCCCceEEEEcCEEEECcCCchh-hHHhcCC
Confidence 4567788999999999999998887754 43 33 563 6999999999999986 6666775
No 23
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.16 E-value=8.6e-06 Score=74.94 Aligned_cols=59 Identities=20% Similarity=0.368 Sum_probs=50.7
Q ss_pred hhHHHhCCcEEEeCceeEEEEEcCCeEEEEe--CCC-cEEEcCEEEEcCCCChHHHHHHcCCC
Q psy3952 2 GEEFCELGGEIRLNQQVESFKENPESVTIST--KQG-DHLESSYALVCAGLQADEMALKSGCS 61 (252)
Q Consensus 2 ~~~a~~~G~~i~~~~~V~~i~~~~~~~~V~t--~~g-~~i~A~~VV~AaG~ws~~l~~~~g~~ 61 (252)
.+.+++.|++|+.+++|++++.++++++|++ .+| .+++|++||.|.|.+| .+.+++|+.
T Consensus 155 ~~~a~~~gv~i~~~~~v~~l~~~~~~v~v~~~~~~G~~~~~a~~vV~ADG~~S-~vR~~lGi~ 216 (570)
T 3fmw_A 155 AEHAREAGAEIPRGHEVTRLRQDAEAVEVTVAGPSGPYPVRARYGVGCDGGRS-TVRRLAADR 216 (570)
T ss_dssp HHHHHHHTEECCBSCEEEECCBCSSCEEEEEEETTEEEEEEESEEEECSCSSC-HHHHHTTCC
T ss_pred HHHHHhCCCEEEeCCEEEEEEEcCCeEEEEEEeCCCcEEEEeCEEEEcCCCCc-hHHHHcCCC
Confidence 4567778999999999999999888888766 677 6899999999999999 688888873
No 24
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=98.15 E-value=3.9e-06 Score=74.28 Aligned_cols=58 Identities=19% Similarity=0.326 Sum_probs=52.2
Q ss_pred hhHHHhCCcEEEeCceeEEEEEcCCeEEEEeCCCcEEEcCEEEEcCCCCh----------HHHHHHcCC
Q psy3952 2 GEEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQA----------DEMALKSGC 60 (252)
Q Consensus 2 ~~~a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g~~i~A~~VV~AaG~ws----------~~l~~~~g~ 60 (252)
.+.+++.|++++++++|++++.++++|.|+|.+| ++.||.||+|+|.|+ ..+++.+|.
T Consensus 139 ~~~l~~~Gv~i~~~~~V~~i~~~~~~~~V~~~~g-~i~ad~VIlAtG~~S~p~~gs~g~g~~la~~~G~ 206 (417)
T 3v76_A 139 MAEMKEAGVQLRLETSIGEVERTASGFRVTTSAG-TVDAASLVVASGGKSIPKMGATGLAYRIAEQFGL 206 (417)
T ss_dssp HHHHHHHTCEEECSCCEEEEEEETTEEEEEETTE-EEEESEEEECCCCSSCGGGTCCCHHHHHHHHTTC
T ss_pred HHHHHHCCCEEEECCEEEEEEEeCCEEEEEECCc-EEEeeEEEECCCCccCCCCCCCcHHHHHHHHCCC
Confidence 4567788999999999999999888899999999 999999999999998 578888886
No 25
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=98.08 E-value=2.4e-05 Score=67.56 Aligned_cols=58 Identities=7% Similarity=0.161 Sum_probs=45.4
Q ss_pred hhHHHhCCcEEEeCceeEEEEEcCCeEE-EE--eC-CCcEEEcCEEEEcCCCChHHHHHHcCC
Q psy3952 2 GEEFCELGGEIRLNQQVESFKENPESVT-IS--TK-QGDHLESSYALVCAGLQADEMALKSGC 60 (252)
Q Consensus 2 ~~~a~~~G~~i~~~~~V~~i~~~~~~~~-V~--t~-~g~~i~A~~VV~AaG~ws~~l~~~~g~ 60 (252)
++.|++.|++++.+++|+++..+++.+. +. .+ ++.+++|+.||-|.|.+|. +.+.+|.
T Consensus 109 ~~~a~~~G~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~a~~vIgAdG~~S~-vr~~~g~ 170 (397)
T 3oz2_A 109 AALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRAKMVIAADGFESE-FGRWAGL 170 (397)
T ss_dssp HHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECCCTTCH-HHHHHTC
T ss_pred HHHHHhcCcEEeeeeeeeeeeeccceeeeeeecccccceEEEEeEEEeCCccccH-HHHHcCC
Confidence 5678889999999999999998887754 32 22 2236999999999999985 6677775
No 26
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=98.05 E-value=2.5e-05 Score=70.68 Aligned_cols=58 Identities=16% Similarity=0.209 Sum_probs=47.5
Q ss_pred hhHHHhCCcEEEeCceeEEEEEcCCe--EEEEeCCCcEEEcCEEEEcCCCChHHHHHHcCC
Q psy3952 2 GEEFCELGGEIRLNQQVESFKENPES--VTISTKQGDHLESSYALVCAGLQADEMALKSGC 60 (252)
Q Consensus 2 ~~~a~~~G~~i~~~~~V~~i~~~~~~--~~V~t~~g~~i~A~~VV~AaG~ws~~l~~~~g~ 60 (252)
.+.|++.|++++++ +|++++.++++ +.|++.+|.+++||.||.|+|.||..+.+++|.
T Consensus 180 ~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~~~~~~~g~ 239 (511)
T 2weu_A 180 SEYAIARGVRHVVD-DVQHVGQDERGWISGVHTKQHGEISGDLFVDCTGFRGLLINQTLGG 239 (511)
T ss_dssp HHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECCGGGCCCCCCCTCC
T ss_pred HHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEECCCCEEEcCEEEECCCcchHHHHHHhCC
Confidence 45677889999999 99999985544 568888886799999999999999765555664
No 27
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=98.05 E-value=9.6e-06 Score=72.28 Aligned_cols=60 Identities=23% Similarity=0.321 Sum_probs=52.1
Q ss_pred hhHHHhCCcEEEeCceeEEEEEcCCe-EEEEeCCCcEEEcCEEEEcCCCCh----------HHHHHHcCCC
Q psy3952 2 GEEFCELGGEIRLNQQVESFKENPES-VTISTKQGDHLESSYALVCAGLQA----------DEMALKSGCS 61 (252)
Q Consensus 2 ~~~a~~~G~~i~~~~~V~~i~~~~~~-~~V~t~~g~~i~A~~VV~AaG~ws----------~~l~~~~g~~ 61 (252)
.+.+++.|++|+++++|+++..++++ +.|++.+|.++.|+.||+|+|.|+ ..+++.+|..
T Consensus 141 ~~~~~~~GV~i~~~~~V~~i~~~~~~v~~V~~~~G~~i~Ad~VVlAtGg~s~~~~g~tG~g~~la~~~G~~ 211 (447)
T 2i0z_A 141 LTRLKDLGVKIRTNTPVETIEYENGQTKAVILQTGEVLETNHVVIAVGGKSVPQTGSTGDGYAWAEKAGHT 211 (447)
T ss_dssp HHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTCCEEECSCEEECCCCSSSGGGSCSSHHHHHHHHTTCC
T ss_pred HHHHHHCCCEEEeCcEEEEEEecCCcEEEEEECCCCEEECCEEEECCCCCcCCCCCCCcHHHHHHHHCCCC
Confidence 45677899999999999999987777 779988885599999999999999 6788889863
No 28
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=98.03 E-value=0.00019 Score=64.87 Aligned_cols=58 Identities=19% Similarity=0.327 Sum_probs=49.7
Q ss_pred hhHHHhCCcEEEeCceeEEEEEcCCeEEEEeCCCc---EEEcCEEEEcCCCChHHHHHHcCC
Q psy3952 2 GEEFCELGGEIRLNQQVESFKENPESVTISTKQGD---HLESSYALVCAGLQADEMALKSGC 60 (252)
Q Consensus 2 ~~~a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g~---~i~A~~VV~AaG~ws~~l~~~~g~ 60 (252)
.+.+++.|++|+.+++|++++.++++++|++.++. +++|++||.|.|.+|. +.+++|+
T Consensus 114 ~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~~S~-VR~~lg~ 174 (499)
T 2qa2_A 114 EEWALGRGAELLRGHTVRALTDEGDHVVVEVEGPDGPRSLTTRYVVGCDGGRST-VRKAAGF 174 (499)
T ss_dssp HHHHHHTTCEEEESCEEEEEEECSSCEEEEEECSSCEEEEEEEEEEECCCTTCH-HHHHTTC
T ss_pred HHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCcEEEEeCEEEEccCcccH-HHHHcCC
Confidence 45677889999999999999998888888776653 6999999999999986 7777886
No 29
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.03 E-value=6.1e-05 Score=69.56 Aligned_cols=58 Identities=19% Similarity=0.295 Sum_probs=47.2
Q ss_pred hhHHHhCCcEEEeCceeEEEEEc-CCeEEEEeC-CC--cEEEcCEEEEcCCCChHHHHHHcCC
Q psy3952 2 GEEFCELGGEIRLNQQVESFKEN-PESVTISTK-QG--DHLESSYALVCAGLQADEMALKSGC 60 (252)
Q Consensus 2 ~~~a~~~G~~i~~~~~V~~i~~~-~~~~~V~t~-~g--~~i~A~~VV~AaG~ws~~l~~~~g~ 60 (252)
.+.|++.|++++++++|+++..+ ++.+.|.+. +| .++.||.||.|+|.+|. +.+.+|.
T Consensus 135 ~~~a~~~Gv~i~~g~~V~~v~~~~g~~~~V~~~~~G~~~~i~AdlVV~AdG~~S~-lr~~lg~ 196 (591)
T 3i3l_A 135 LDEARSRGITVHEETPVTDVDLSDPDRVVLTVRRGGESVTVESDFVIDAGGSGGP-ISRKLGV 196 (591)
T ss_dssp HHHHHHTTCEEETTCCEEEEECCSTTCEEEEEEETTEEEEEEESEEEECCGGGCH-HHHHHTC
T ss_pred HHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEEecCCceEEEEcCEEEECCCCcch-hHHHcCC
Confidence 45678899999999999999976 455777765 55 47999999999999985 6666775
No 30
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=97.98 E-value=6.2e-05 Score=66.78 Aligned_cols=67 Identities=12% Similarity=0.047 Sum_probs=49.9
Q ss_pred cEEEeCceeEEEEEcCCeEEEEeCCCcEEEcCEEEEcCCCChHHHHHHcCCC-C-----CCceeeeeeEEEEeCC
Q psy3952 10 GEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQADEMALKSGCS-L-----EPAIVPFRGEYLLLNP 78 (252)
Q Consensus 10 ~~i~~~~~V~~i~~~~~~~~V~t~~g~~i~A~~VV~AaG~ws~~l~~~~g~~-~-----~~~~~p~~g~~~~~~~ 78 (252)
++|+++++|++|+.++++|+|+|.+|.++.||+||+|+.++.- .+.+..+ . .++..++...++.++.
T Consensus 248 ~~i~~~~~V~~i~~~~~~~~v~~~~g~~~~ad~vi~a~p~~~~--~~l~~~~~~~~~~~~~~~~~~~~v~l~~~~ 320 (470)
T 3i6d_A 248 TKVYKGTKVTKLSHSGSCYSLELDNGVTLDADSVIVTAPHKAA--AGMLSELPAISHLKNMHSTSVANVALGFPE 320 (470)
T ss_dssp EEEECSCCEEEEEECSSSEEEEESSSCEEEESEEEECSCHHHH--HHHTTTSTTHHHHHTCEEEEEEEEEEEESS
T ss_pred CEEEeCCceEEEEEcCCeEEEEECCCCEEECCEEEECCCHHHH--HHHcCCchhhHHHhcCCCCceEEEEEEECc
Confidence 6999999999999988889999999877999999999998862 2333211 0 2355565555666654
No 31
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=97.97 E-value=1.3e-05 Score=70.55 Aligned_cols=59 Identities=15% Similarity=0.192 Sum_probs=51.2
Q ss_pred hhHHHhCCcEEEeCceeEEEEEc----CCeEEEEeCCCcEEEcCEEEEcCCCCh----------HHHHHHcCCC
Q psy3952 2 GEEFCELGGEIRLNQQVESFKEN----PESVTISTKQGDHLESSYALVCAGLQA----------DEMALKSGCS 61 (252)
Q Consensus 2 ~~~a~~~G~~i~~~~~V~~i~~~----~~~~~V~t~~g~~i~A~~VV~AaG~ws----------~~l~~~~g~~ 61 (252)
.+.+++.|++++++++|+++..+ +++|.|++++| +++||.||+|+|.|+ ..+++.+|..
T Consensus 116 ~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~~~v~~~~g-~i~ad~VVlAtG~~s~p~~g~~G~g~~la~~~G~~ 188 (401)
T 2gqf_A 116 KSECDKYGAKILLRSEVSQVERIQNDEKVRFVLQVNST-QWQCKNLIVATGGLSMPGLGATPFGYQIAEQFGIP 188 (401)
T ss_dssp HHHHHHHTCEEECSCCEEEEEECCSCSSCCEEEEETTE-EEEESEEEECCCCSSCGGGTCCSHHHHHHHHTTCC
T ss_pred HHHHHHCCCEEEeCCEEEEEEcccCcCCCeEEEEECCC-EEECCEEEECCCCccCCCCCCChHHHHHHHHCCCC
Confidence 45677889999999999999977 56789999888 899999999999998 5788888863
No 32
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=97.84 E-value=2.3e-05 Score=70.50 Aligned_cols=51 Identities=22% Similarity=0.347 Sum_probs=43.8
Q ss_pred ChhHHHhCCcEEEeCceeEEEEEcCCeEE-EEeCCCcEEEcCEEEEcCCCCh
Q psy3952 1 MGEEFCELGGEIRLNQQVESFKENPESVT-ISTKQGDHLESSYALVCAGLQA 51 (252)
Q Consensus 1 l~~~a~~~G~~i~~~~~V~~i~~~~~~~~-V~t~~g~~i~A~~VV~AaG~ws 51 (252)
|++.++++|++|+++++|++|..++++++ |++.+|+++.||.||.+++++.
T Consensus 227 L~~~~~~~Gg~I~~~~~V~~I~~~~~~~~gV~~~~g~~~~ad~VV~~a~~~~ 278 (501)
T 4dgk_A 227 MIKLFQDLGGEVVLNARVSHMETTGNKIEAVHLEDGRRFLTQAVASNADVVH 278 (501)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSCEEECCC---
T ss_pred HHHHHHHhCCceeeecceeEEEeeCCeEEEEEecCCcEEEcCEEEECCCHHH
Confidence 35678899999999999999999999976 8999988899999999999885
No 33
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=97.82 E-value=4.6e-05 Score=69.37 Aligned_cols=59 Identities=20% Similarity=0.278 Sum_probs=50.3
Q ss_pred hhHHHhCCcEEEeCceeEEEEEcCC----eEEEEeCCC---cEEEcCEEEEcCCCChHHHHHHcCCC
Q psy3952 2 GEEFCELGGEIRLNQQVESFKENPE----SVTISTKQG---DHLESSYALVCAGLQADEMALKSGCS 61 (252)
Q Consensus 2 ~~~a~~~G~~i~~~~~V~~i~~~~~----~~~V~t~~g---~~i~A~~VV~AaG~ws~~l~~~~g~~ 61 (252)
.+.+++.|++++++++|++++.+++ +|+|++.++ .+++|++||.|.|.|| .+.+++|++
T Consensus 127 ~~~a~~~gv~i~~~~~v~~i~~~~~~~~~~v~v~~~~~~~~~~i~a~~vV~AdG~~S-~vR~~lgi~ 192 (535)
T 3ihg_A 127 LAQARKHGGAIRFGTRLLSFRQHDDDAGAGVTARLAGPDGEYDLRAGYLVGADGNRS-LVRESLGIG 192 (535)
T ss_dssp HHHHHHTTCEEESSCEEEEEEEECGGGCSEEEEEEEETTEEEEEEEEEEEECCCTTC-HHHHHTTCC
T ss_pred HHHHHhCCCEEEeCCEEEEEEECCCCccccEEEEEEcCCCeEEEEeCEEEECCCCcc-hHHHHcCCC
Confidence 4677888999999999999999887 887765543 5899999999999999 788888873
No 34
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=97.74 E-value=0.00027 Score=62.97 Aligned_cols=66 Identities=14% Similarity=0.131 Sum_probs=50.0
Q ss_pred cEEEeCceeEEEEEcCCeEEEEeCCCcEEEcCEEEEcCCCChHHHHHHcCCC-C----CCceeeeeeEEEEeCC
Q psy3952 10 GEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQADEMALKSGCS-L----EPAIVPFRGEYLLLNP 78 (252)
Q Consensus 10 ~~i~~~~~V~~i~~~~~~~~V~t~~g~~i~A~~VV~AaG~ws~~l~~~~g~~-~----~~~~~p~~g~~~~~~~ 78 (252)
++|+++++|++|+.++++|+|+|.+| ++.||+||+|+++|.- .+++..+ . .++..++...++.++.
T Consensus 249 ~~i~~~~~V~~i~~~~~~~~v~~~~g-~~~ad~vV~a~p~~~~--~~ll~~~~~~~~~~~~~~~~~~v~l~~~~ 319 (475)
T 3lov_A 249 SEIRLETPLLAISREDGRYRLKTDHG-PEYADYVLLTIPHPQV--VQLLPDAHLPELEQLTTHSTATVTMIFDQ 319 (475)
T ss_dssp CEEESSCCCCEEEEETTEEEEECTTC-CEEESEEEECSCHHHH--HHHCTTSCCHHHHTCCEEEEEEEEEEEEC
T ss_pred CEEEcCCeeeEEEEeCCEEEEEECCC-eEECCEEEECCCHHHH--HHHcCccCHHHHhcCCCCeEEEEEEEECC
Confidence 69999999999999988999999999 8999999999999862 2223211 0 2455666666666654
No 35
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=97.73 E-value=4.7e-05 Score=66.43 Aligned_cols=59 Identities=10% Similarity=0.102 Sum_probs=50.9
Q ss_pred hhHHHhC-CcEEEeCceeEEEEEcCCeE--EEEeCCCcEEEcCEEEEcCCCChHHHHHHcCCC
Q psy3952 2 GEEFCEL-GGEIRLNQQVESFKENPESV--TISTKQGDHLESSYALVCAGLQADEMALKSGCS 61 (252)
Q Consensus 2 ~~~a~~~-G~~i~~~~~V~~i~~~~~~~--~V~t~~g~~i~A~~VV~AaG~ws~~l~~~~g~~ 61 (252)
.+.+++. |++++++++|++++.++++| .|++.+|.+++||.||.|.|.||. +.+++|..
T Consensus 114 ~~~~~~~~gv~i~~~~~v~~i~~~~~~v~g~v~~~~g~~~~ad~vV~AdG~~s~-vr~~lg~~ 175 (399)
T 2x3n_A 114 LEKIDGEATVEMLFETRIEAVQRDERHAIDQVRLNDGRVLRPRVVVGADGIASY-VRRRLLDI 175 (399)
T ss_dssp HHHHTTCTTEEEECSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECCCTTCH-HHHHTSCC
T ss_pred HHHhhhcCCcEEEcCCEEEEEEEcCCceEEEEEECCCCEEECCEEEECCCCChH-HHHHhCCC
Confidence 4556677 99999999999999988888 898888878999999999999997 67778763
No 36
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=97.72 E-value=6.1e-05 Score=58.20 Aligned_cols=55 Identities=16% Similarity=0.267 Sum_probs=48.1
Q ss_pred hHHHhCCcEEEeCceeEEEEEcCCeEEEEeCCCcEEEcCEEEEcCCCChHHHHHHcCC
Q psy3952 3 EEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQADEMALKSGC 60 (252)
Q Consensus 3 ~~a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g~~i~A~~VV~AaG~ws~~l~~~~g~ 60 (252)
+.+++.|++++++ +|++++.+++++.|++++| ++.||.||+|+|.++. +.+.+|+
T Consensus 64 ~~~~~~gv~v~~~-~v~~i~~~~~~~~v~~~~g-~i~ad~vI~A~G~~~~-~~~~~g~ 118 (180)
T 2ywl_A 64 AHARRYGAEVRPG-VVKGVRDMGGVFEVETEEG-VEKAERLLLCTHKDPT-LPSLLGL 118 (180)
T ss_dssp HHHHHTTCEEEEC-CCCEEEECSSSEEEECSSC-EEEEEEEEECCTTCCH-HHHHHTC
T ss_pred HHHHHcCCEEEeC-EEEEEEEcCCEEEEEECCC-EEEECEEEECCCCCCC-ccccCCC
Confidence 4577889999999 9999998877889999999 9999999999999984 6677775
No 37
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=97.71 E-value=3.5e-05 Score=67.65 Aligned_cols=51 Identities=16% Similarity=0.196 Sum_probs=44.4
Q ss_pred ChhHHHhCCcEEEeCceeEEEEEcCCeEE-EEeCCCcEEEcCEEEEcCCCChH
Q psy3952 1 MGEEFCELGGEIRLNQQVESFKENPESVT-ISTKQGDHLESSYALVCAGLQAD 52 (252)
Q Consensus 1 l~~~a~~~G~~i~~~~~V~~i~~~~~~~~-V~t~~g~~i~A~~VV~AaG~ws~ 52 (252)
|++.++++|++|+++++|++|+.++++|+ |.++.+ ++.||.||+|+|+|..
T Consensus 202 l~~~~~~~G~~i~~~~~V~~i~~~~~~~~gv~~~g~-~~~ad~VV~a~~~~~~ 253 (425)
T 3ka7_A 202 LETVISANGGKIHTGQEVSKILIENGKAAGIIADDR-IHDADLVISNLGHAAT 253 (425)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTE-EEECSEEEECSCHHHH
T ss_pred HHHHHHHcCCEEEECCceeEEEEECCEEEEEEECCE-EEECCEEEECCCHHHH
Confidence 35677889999999999999999888886 888744 8999999999999964
No 38
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=97.71 E-value=2.7e-05 Score=68.48 Aligned_cols=54 Identities=15% Similarity=0.156 Sum_probs=45.3
Q ss_pred hhHHHhCCcEEEeCceeEEEEEcCCeEEEEeCCCcEEEcCEEEEcCCCChHHHHHHcC
Q psy3952 2 GEEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQADEMALKSG 59 (252)
Q Consensus 2 ~~~a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g~~i~A~~VV~AaG~ws~~l~~~~g 59 (252)
++.++++|++|+++++|++|+.++++| |.++.+ ++.||.||+|+|+|. +.++++
T Consensus 196 ~~~~~~~G~~i~~~~~V~~i~~~~~~v-V~~~g~-~~~ad~Vv~a~~~~~--~~~ll~ 249 (421)
T 3nrn_A 196 ERIIMENKGKILTRKEVVEINIEEKKV-YTRDNE-EYSFDVAISNVGVRE--TVKLIG 249 (421)
T ss_dssp HHHHHTTTCEEESSCCEEEEETTTTEE-EETTCC-EEECSEEEECSCHHH--HHHHHC
T ss_pred HHHHHHCCCEEEcCCeEEEEEEECCEE-EEeCCc-EEEeCEEEECCCHHH--HHHhcC
Confidence 566788899999999999999988899 876655 899999999999985 334554
No 39
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=97.70 E-value=0.0001 Score=67.33 Aligned_cols=59 Identities=24% Similarity=0.484 Sum_probs=49.0
Q ss_pred hhHHHhCCcEEEeCceeEEEEEcCCeE-EEEeCCCcEEEcCEEEEcCCCChHH---HHHHcCC
Q psy3952 2 GEEFCELGGEIRLNQQVESFKENPESV-TISTKQGDHLESSYALVCAGLQADE---MALKSGC 60 (252)
Q Consensus 2 ~~~a~~~G~~i~~~~~V~~i~~~~~~~-~V~t~~g~~i~A~~VV~AaG~ws~~---l~~~~g~ 60 (252)
.+.+++.|++|+++++|++|+.+++++ .|++.+|.++.|+.||+|+|.|+.. ++...|+
T Consensus 227 ~~~l~~~Gv~I~~~t~V~~I~~~~~~v~gV~l~~G~~i~Ad~VVlA~G~~s~~~~~~l~~~Gi 289 (549)
T 3nlc_A 227 RATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEEIKSRHVVLAVGHSARDTFEMLHERGV 289 (549)
T ss_dssp HHHHHHTTCEEESSCCEEEEEESSSBEEEEEETTSCEEECSCEEECCCTTCHHHHHHHHHTTC
T ss_pred HHHHHhcCCEEEeCCEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCChhhHHHHHHHcCC
Confidence 456778899999999999999888765 4888888679999999999999973 4455665
No 40
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=97.66 E-value=0.00015 Score=65.55 Aligned_cols=59 Identities=22% Similarity=0.402 Sum_probs=49.8
Q ss_pred hhHHHhCCcEEEeCceeEEEEEcCCeEEEEeCCCc---EEEcCEEEEcCCCChHHHHHHcCCC
Q psy3952 2 GEEFCELGGEIRLNQQVESFKENPESVTISTKQGD---HLESSYALVCAGLQADEMALKSGCS 61 (252)
Q Consensus 2 ~~~a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g~---~i~A~~VV~AaG~ws~~l~~~~g~~ 61 (252)
.+.+++.|++|+.+++|++++.++++++|++.++. +++|++||.|.|.+|. +.+++|+.
T Consensus 113 ~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~~S~-VR~~lg~~ 174 (500)
T 2qa1_A 113 EQWATGLGADIRRGHEVLSLTDDGAGVTVEVRGPEGKHTLRAAYLVGCDGGRSS-VRKAAGFD 174 (500)
T ss_dssp HHHHHHTTCEEEETCEEEEEEEETTEEEEEEEETTEEEEEEESEEEECCCTTCH-HHHHTTCC
T ss_pred HHHHHHCCCEEECCcEEEEEEEcCCeEEEEEEcCCCCEEEEeCEEEECCCcchH-HHHHcCCC
Confidence 45677889999999999999998888887765553 6999999999999985 77778863
No 41
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=97.50 E-value=6.8e-05 Score=66.88 Aligned_cols=53 Identities=9% Similarity=0.132 Sum_probs=44.2
Q ss_pred ChhHHHhCCcEEEeCceeEEEEEc--CCeE-EEEeCCCcEEEcCEEEEcCCCChHHH
Q psy3952 1 MGEEFCELGGEIRLNQQVESFKEN--PESV-TISTKQGDHLESSYALVCAGLQADEM 54 (252)
Q Consensus 1 l~~~a~~~G~~i~~~~~V~~i~~~--~~~~-~V~t~~g~~i~A~~VV~AaG~ws~~l 54 (252)
|++.++++|++|+++++|++|..+ ++++ .|.|+ |.++.||+||+|+|+|+..+
T Consensus 248 l~~~~~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~~-g~~~~ad~VV~a~~~~~~~l 303 (453)
T 2bcg_G 248 FARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKTK-LGTFKAPLVIADPTYFPEKC 303 (453)
T ss_dssp HHHHHHHTTCEEECSCCCCEEEEETTTTEEEEEEET-TEEEECSCEEECGGGCGGGE
T ss_pred HHHHHHHcCCEEECCCEEEEEEEECCCCeEEEEEEC-CeEEECCEEEECCCccchhh
Confidence 356678899999999999999987 7775 57786 44899999999999997644
No 42
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=97.48 E-value=0.00084 Score=58.60 Aligned_cols=55 Identities=13% Similarity=0.246 Sum_probs=45.5
Q ss_pred hHHHhCCcEEEeCceeEEEEEcCCeEEEEeCCCcEEEcCEEEEcCCCChHHHHHHc-CC
Q psy3952 3 EEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQADEMALKS-GC 60 (252)
Q Consensus 3 ~~a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g~~i~A~~VV~AaG~ws~~l~~~~-g~ 60 (252)
+.+++ ++|+++++|++++.++++|+|++.+|.+++||.||.|.|.+|.. .+.+ |.
T Consensus 135 ~~~~~--~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~a~~vV~AdG~~S~v-r~~l~~~ 190 (407)
T 3rp8_A 135 DYWGR--DSVQFGKRVTRCEEDADGVTVWFTDGSSASGDLLIAADGSHSAL-RPWVLGF 190 (407)
T ss_dssp HHHCG--GGEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECCCTTCSS-HHHHHSS
T ss_pred HhCCc--CEEEECCEEEEEEecCCcEEEEEcCCCEEeeCEEEECCCcChHH-HHHhcCC
Confidence 34444 88999999999999999999999888789999999999999863 3334 65
No 43
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=97.39 E-value=0.00015 Score=65.00 Aligned_cols=50 Identities=16% Similarity=0.194 Sum_probs=41.8
Q ss_pred ChhHHHhCCcEEEeCceeEEEEE-cCCe-EEEEeCCCcEEEcCEEEEcCCCC
Q psy3952 1 MGEEFCELGGEIRLNQQVESFKE-NPES-VTISTKQGDHLESSYALVCAGLQ 50 (252)
Q Consensus 1 l~~~a~~~G~~i~~~~~V~~i~~-~~~~-~~V~t~~g~~i~A~~VV~AaG~w 50 (252)
|++.++++|++|+.+++|++|.. ++++ +.|+|.+|.++.||+||+|+|.+
T Consensus 262 L~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~G~~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 262 FSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKSSDGEIAYCDKVICDPSYV 313 (475)
T ss_dssp HHHHHHHC--CEESSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECGGGC
T ss_pred HHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEECCCcEEECCEEEECCCcc
Confidence 35778899999999999999998 6666 45999888679999999999998
No 44
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=97.39 E-value=0.00019 Score=61.00 Aligned_cols=50 Identities=6% Similarity=0.005 Sum_probs=45.2
Q ss_pred hHHHhCCcEEEeCceeEEEEEcCCeEE-EEeCCCcEEEcCEEEEcCCCChHH
Q psy3952 3 EEFCELGGEIRLNQQVESFKENPESVT-ISTKQGDHLESSYALVCAGLQADE 53 (252)
Q Consensus 3 ~~a~~~G~~i~~~~~V~~i~~~~~~~~-V~t~~g~~i~A~~VV~AaG~ws~~ 53 (252)
+.+++.|++++.+++|++++.+++.|. |+|++| ++.+|+||+|+|.|+..
T Consensus 84 ~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g-~~~~d~vV~AtG~~~~~ 134 (357)
T 4a9w_A 84 QYEQKYALPVLRPIRVQRVSHFGERLRVVARDGR-QWLARAVISATGTWGEA 134 (357)
T ss_dssp HHHHHTTCCEECSCCEEEEEEETTEEEEEETTSC-EEEEEEEEECCCSGGGB
T ss_pred HHHHHcCCEEEcCCEEEEEEECCCcEEEEEeCCC-EEEeCEEEECCCCCCCC
Confidence 456788999999999999999999999 999999 99999999999998753
No 45
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=97.38 E-value=0.00011 Score=65.51 Aligned_cols=49 Identities=14% Similarity=0.142 Sum_probs=43.1
Q ss_pred hhHHHhCCcEEEeCceeEEEEEcCCe-EEEEeCCCcEEEcCEEEEcCCCCh
Q psy3952 2 GEEFCELGGEIRLNQQVESFKENPES-VTISTKQGDHLESSYALVCAGLQA 51 (252)
Q Consensus 2 ~~~a~~~G~~i~~~~~V~~i~~~~~~-~~V~t~~g~~i~A~~VV~AaG~ws 51 (252)
++.+++.|++|+++++|++|+.++++ |.|+|+++ ++.||+||+|+++|.
T Consensus 241 ~~~l~~~g~~i~~~~~V~~i~~~~~~~~~v~~~~~-~~~ad~vv~a~p~~~ 290 (477)
T 3nks_A 241 ETHLTSRGVSVLRGQPVCGLSLQAEGRWKVSLRDS-SLEADHVISAIPASV 290 (477)
T ss_dssp HHHHHHTTCEEECSCCCCEEEECGGGCEEEECSSC-EEEESEEEECSCHHH
T ss_pred HHHHHhcCCEEEeCCEEEEEEEcCCceEEEEECCe-EEEcCEEEECCCHHH
Confidence 45667789999999999999988776 99988777 899999999999885
No 46
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=97.32 E-value=0.00039 Score=57.96 Aligned_cols=69 Identities=9% Similarity=0.040 Sum_probs=48.9
Q ss_pred hHHHh-CCcEEEeCceeEEEEEcCCeE-EEEeC---------CC-----cEEEcCEEEEcCC------CChHHHHHHcCC
Q psy3952 3 EEFCE-LGGEIRLNQQVESFKENPESV-TISTK---------QG-----DHLESSYALVCAG------LQADEMALKSGC 60 (252)
Q Consensus 3 ~~a~~-~G~~i~~~~~V~~i~~~~~~~-~V~t~---------~g-----~~i~A~~VV~AaG------~ws~~l~~~~g~ 60 (252)
+.+.+ .|++++++++|+++..+++++ .|.+. +| .++.||.||+|+| .|+..++..+++
T Consensus 127 ~~~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~s~~~~~~~~~~~~~g~ 206 (284)
T 1rp0_A 127 SKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHDGPFGATGVKRLKSIGM 206 (284)
T ss_dssp HHHHTSTTEEEEETEEEEEEEEETTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCSSSTTTTHHHHHHHHTTS
T ss_pred HHHHhcCCCEEEcCcEEEEEEecCCeEEEEEEeccccccccCccccCceEEEECCEEEECCCCchHHHHHHHHHhhhccC
Confidence 44544 699999999999999877764 34331 21 4799999999999 555566655564
Q ss_pred CCCCceeeeeeEE
Q psy3952 61 SLEPAIVPFRGEY 73 (252)
Q Consensus 61 ~~~~~~~p~~g~~ 73 (252)
..++.|.+|.+
T Consensus 207 --~~~v~~~~g~~ 217 (284)
T 1rp0_A 207 --IDHVPGMKALD 217 (284)
T ss_dssp --SSCCCCCEEEC
T ss_pred --CCCcCCcCCch
Confidence 35677777743
No 47
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=97.31 E-value=0.00027 Score=63.41 Aligned_cols=50 Identities=14% Similarity=0.173 Sum_probs=43.8
Q ss_pred hhHHHhCC-cEEEeCceeEEEEEcCCeEEEEeCCCcEEEcCEEEEcCCCCh
Q psy3952 2 GEEFCELG-GEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQA 51 (252)
Q Consensus 2 ~~~a~~~G-~~i~~~~~V~~i~~~~~~~~V~t~~g~~i~A~~VV~AaG~ws 51 (252)
++.+++.| ++|+++++|++|+.+++++.|++.+|.++.||+||+|+|++.
T Consensus 262 ~~~l~~~g~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vI~a~~~~~ 312 (495)
T 2vvm_A 262 WEEAAGTGRLGYVFGCPVRSVVNERDAARVTARDGREFVAKRVVCTIPLNV 312 (495)
T ss_dssp HHHHHTTTCEEEESSCCEEEEEECSSSEEEEETTCCEEEEEEEEECCCGGG
T ss_pred HHHhhhcCceEEEeCCEEEEEEEcCCEEEEEECCCCEEEcCEEEECCCHHH
Confidence 44566778 999999999999998888999998886799999999999875
No 48
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=97.30 E-value=0.00036 Score=60.65 Aligned_cols=58 Identities=19% Similarity=0.340 Sum_probs=49.8
Q ss_pred hHHHhCCcEEEeCceeEEEEEcCCeEEEEeCCCcEEEcCEEEEcCCCChHH-HHHHcCC
Q psy3952 3 EEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQADE-MALKSGC 60 (252)
Q Consensus 3 ~~a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g~~i~A~~VV~AaG~ws~~-l~~~~g~ 60 (252)
+.+++.|++++++++|++++.+++++.|.+.+|.++.||.||+|+|.+.+. +++.+|+
T Consensus 195 ~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vv~a~G~~p~~~l~~~~g~ 253 (384)
T 2v3a_A 195 AGLEGLGVRFHLGPVLASLKKAGEGLEAHLSDGEVIPCDLVVSAVGLRPRTELAFAAGL 253 (384)
T ss_dssp HHHHTTTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEECCHHHHHTTC
T ss_pred HHHHHcCCEEEeCCEEEEEEecCCEEEEEECCCCEEECCEEEECcCCCcCHHHHHHCCC
Confidence 456788999999999999998777788888888789999999999999764 7777775
No 49
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=97.27 E-value=0.00036 Score=59.82 Aligned_cols=49 Identities=18% Similarity=0.091 Sum_probs=43.3
Q ss_pred hHHHhCCcEEEeCceeEEEEEcCCeEEEEeCCCcEEEcCEEEEcCCCChH
Q psy3952 3 EEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQAD 52 (252)
Q Consensus 3 ~~a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g~~i~A~~VV~AaG~ws~ 52 (252)
+.+++.|++++.+++|++++.++++|.|.+.+| ++.+|+||+|+|.++.
T Consensus 96 ~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g-~~~~d~vVlAtG~~~~ 144 (369)
T 3d1c_A 96 VVANHYELNIFENTVVTNISADDAYYTIATTTE-TYHADYIFVATGDYNF 144 (369)
T ss_dssp HHHHHTTCEEECSCCEEEEEECSSSEEEEESSC-CEEEEEEEECCCSTTS
T ss_pred HHHHHcCCeEEeCCEEEEEEECCCeEEEEeCCC-EEEeCEEEECCCCCCc
Confidence 346778999999999999998877899999888 8999999999999863
No 50
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=97.27 E-value=0.00016 Score=66.06 Aligned_cols=58 Identities=14% Similarity=0.174 Sum_probs=47.2
Q ss_pred hhHHHhC-CcEEEeCceeEEEEEcCCe--EEEEeCCCcEEEcCEEEEcCCCChHHHHHHcCC
Q psy3952 2 GEEFCEL-GGEIRLNQQVESFKENPES--VTISTKQGDHLESSYALVCAGLQADEMALKSGC 60 (252)
Q Consensus 2 ~~~a~~~-G~~i~~~~~V~~i~~~~~~--~~V~t~~g~~i~A~~VV~AaG~ws~~l~~~~g~ 60 (252)
.+.+++. |++++++ +|++++.++++ +.|.+.+|.++.||.||.|+|.|+..+.+++|.
T Consensus 201 ~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~G~~i~ad~vI~A~G~~S~~~~~~lg~ 261 (550)
T 2e4g_A 201 RRFATEKLGVRHVED-RVEHVQRDANGNIESVRTATGRVFDADLFVDCSGFRGLLINKAMEE 261 (550)
T ss_dssp HHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEETTSCEEECSEEEECCGGGCCCCCCCTCC
T ss_pred HHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEECCCCEEECCEEEECCCCchhhHHHHhCC
Confidence 4567777 9999999 99999886544 568888886799999999999999765666664
No 51
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=97.26 E-value=0.00011 Score=65.20 Aligned_cols=52 Identities=15% Similarity=0.224 Sum_probs=43.4
Q ss_pred hhHHHhCCcEEEeCceeEEEEEcCCeEE-EEeCCCcEEEcCEEEEcCCCChHHH
Q psy3952 2 GEEFCELGGEIRLNQQVESFKENPESVT-ISTKQGDHLESSYALVCAGLQADEM 54 (252)
Q Consensus 2 ~~~a~~~G~~i~~~~~V~~i~~~~~~~~-V~t~~g~~i~A~~VV~AaG~ws~~l 54 (252)
++.++++|++|+++++|++|..+++++. |.++ |.++.||+||+|+|+|+..+
T Consensus 241 ~~~~~~~G~~i~~~~~V~~I~~~~~~v~~v~~~-g~~~~ad~VV~a~~~~~~~~ 293 (433)
T 1d5t_A 241 ARLSAIYGGTYMLNKPVDDIIMENGKVVGVKSE-GEVARCKQLICDPSYVPDRV 293 (433)
T ss_dssp HHHHHHHTCCCBCSCCCCEEEEETTEEEEEEET-TEEEECSEEEECGGGCGGGE
T ss_pred HHHHHHcCCEEECCCEEEEEEEeCCEEEEEEEC-CeEEECCEEEECCCCCcccc
Confidence 4567788999999999999998888876 6664 44899999999999998643
No 52
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=97.14 E-value=0.00068 Score=54.70 Aligned_cols=50 Identities=10% Similarity=0.002 Sum_probs=41.3
Q ss_pred hHHHhC-CcEEEeCceeEEEEEcCCeE-EEEeCCCcEEEcCEEEEcCCCChHH
Q psy3952 3 EEFCEL-GGEIRLNQQVESFKENPESV-TISTKQGDHLESSYALVCAGLQADE 53 (252)
Q Consensus 3 ~~a~~~-G~~i~~~~~V~~i~~~~~~~-~V~t~~g~~i~A~~VV~AaG~ws~~ 53 (252)
+.+++. |++++. ++|+++..+++++ .|.+.+|.++.||.||+|+|.|+..
T Consensus 76 ~~~~~~~gv~i~~-~~v~~i~~~~~~v~~v~~~~g~~i~a~~VV~A~G~~s~~ 127 (232)
T 2cul_A 76 YLLEGLRPLHLFQ-ATATGLLLEGNRVVGVRTWEGPPARGEKVVLAVGSFLGA 127 (232)
T ss_dssp HHHHTCTTEEEEE-CCEEEEEEETTEEEEEEETTSCCEECSEEEECCTTCSSC
T ss_pred HHHHcCCCcEEEE-eEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCChhh
Confidence 456676 999984 7999999877774 5888888679999999999998754
No 53
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=97.13 E-value=0.001 Score=58.37 Aligned_cols=58 Identities=14% Similarity=0.290 Sum_probs=49.3
Q ss_pred hHHHhCCcEEEeCceeEEEEEcCCeE-EEEeCCCcEEEcCEEEEcCCCChH-HHHHHcCC
Q psy3952 3 EEFCELGGEIRLNQQVESFKENPESV-TISTKQGDHLESSYALVCAGLQAD-EMALKSGC 60 (252)
Q Consensus 3 ~~a~~~G~~i~~~~~V~~i~~~~~~~-~V~t~~g~~i~A~~VV~AaG~ws~-~l~~~~g~ 60 (252)
+.++++|++++++++|++++.+++++ .|.+.+|.++.||.||+|+|.+.+ .+++.+|+
T Consensus 202 ~~l~~~GV~i~~~~~v~~i~~~~~~v~~v~l~dG~~i~aD~Vv~a~G~~p~~~l~~~~gl 261 (415)
T 3lxd_A 202 AEHRAHGVDLRTGAAMDCIEGDGTKVTGVRMQDGSVIPADIVIVGIGIVPCVGALISAGA 261 (415)
T ss_dssp HHHHHTTCEEEETCCEEEEEESSSBEEEEEESSSCEEECSEEEECSCCEESCHHHHHTTC
T ss_pred HHHHhCCCEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECCCCccChHHHHhCCC
Confidence 45678899999999999999877776 588888878999999999999876 47777776
No 54
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=97.09 E-value=0.00057 Score=62.01 Aligned_cols=59 Identities=24% Similarity=0.331 Sum_probs=49.0
Q ss_pred hhHHHhCCcEEEeCceeEEEEEcCCe----EEEEeCCCc-EEEcCEEEEcCCCChHH--HHHHcCC
Q psy3952 2 GEEFCELGGEIRLNQQVESFKENPES----VTISTKQGD-HLESSYALVCAGLQADE--MALKSGC 60 (252)
Q Consensus 2 ~~~a~~~G~~i~~~~~V~~i~~~~~~----~~V~t~~g~-~i~A~~VV~AaG~ws~~--l~~~~g~ 60 (252)
.+.+++.|++++++++|++++.++++ +.|++.+|. ++.||.||+|+|.+.+. +++.+|+
T Consensus 262 ~~~l~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~p~~~~~l~~~gl 327 (523)
T 1mo9_A 262 LDRMKEQGMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLGLGEQPRSAELAKILGL 327 (523)
T ss_dssp HHHHHHTTCEEESSCEEEEEEECTTSBEEEEEEEETTEEEEEECSCEEECCCCEECCHHHHHHHTC
T ss_pred HHHHHhCCcEEEECCEEEEEEEcCCCceEEEEEEECCCcEEEEcCEEEECcCCccCCccCHHHcCC
Confidence 34577899999999999999986554 678888885 69999999999999765 6677775
No 55
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=97.05 E-value=0.00092 Score=59.70 Aligned_cols=58 Identities=12% Similarity=0.243 Sum_probs=48.9
Q ss_pred hHHHhCCcEEEeCceeEEEEEcCCeEEEEeCCCcEEEcCEEEEcCCCChH-HHHHHcCC
Q psy3952 3 EEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQAD-EMALKSGC 60 (252)
Q Consensus 3 ~~a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g~~i~A~~VV~AaG~ws~-~l~~~~g~ 60 (252)
+.+++.|++++++++|++++.++++++|.+.+|.++.||.||+|+|.+.+ .+++.+|+
T Consensus 210 ~~l~~~GV~i~~~~~v~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~~p~~~l~~~~gl 268 (472)
T 3iwa_A 210 HDLEKNDVVVHTGEKVVRLEGENGKVARVITDKRTLDADLVILAAGVSPNTQLARDAGL 268 (472)
T ss_dssp HHHHHTTCEEECSCCEEEEEESSSBEEEEEESSCEEECSEEEECSCEEECCHHHHHHTC
T ss_pred HHHHhcCCEEEeCCEEEEEEccCCeEEEEEeCCCEEEcCEEEECCCCCcCHHHHHhCCc
Confidence 45778999999999999999877777777777768999999999999864 57777775
No 56
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=97.05 E-value=0.00095 Score=58.38 Aligned_cols=58 Identities=16% Similarity=0.300 Sum_probs=49.2
Q ss_pred hHHHhCCcEEEeCceeEEEEEcCCeE-EEEeCCCcEEEcCEEEEcCCCChH-HHHHHcCC
Q psy3952 3 EEFCELGGEIRLNQQVESFKENPESV-TISTKQGDHLESSYALVCAGLQAD-EMALKSGC 60 (252)
Q Consensus 3 ~~a~~~G~~i~~~~~V~~i~~~~~~~-~V~t~~g~~i~A~~VV~AaG~ws~-~l~~~~g~ 60 (252)
+.++++|++++++++|++++.+++++ .|.+.+|.++.||.||+|+|...+ .+++.+|+
T Consensus 192 ~~l~~~GV~i~~~~~v~~i~~~~~~v~~V~~~dG~~i~aD~Vv~a~G~~p~~~l~~~~gl 251 (404)
T 3fg2_P 192 DRHSGAGIRMHYGVRATEIAAEGDRVTGVVLSDGNTLPCDLVVVGVGVIPNVEIAAAAGL 251 (404)
T ss_dssp HHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSEEEECCCEEECCHHHHHTTC
T ss_pred HHHHhCCcEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECcCCccCHHHHHhCCC
Confidence 45678899999999999999877765 488888878999999999999865 47777776
No 57
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=97.04 E-value=0.00037 Score=63.42 Aligned_cols=58 Identities=19% Similarity=0.214 Sum_probs=46.9
Q ss_pred hhHHHhCCcEEEeCceeEEEEEcCCe--EEEEeCCCcEEEcCEEEEcCCCChHHHHHHcCC
Q psy3952 2 GEEFCELGGEIRLNQQVESFKENPES--VTISTKQGDHLESSYALVCAGLQADEMALKSGC 60 (252)
Q Consensus 2 ~~~a~~~G~~i~~~~~V~~i~~~~~~--~~V~t~~g~~i~A~~VV~AaG~ws~~l~~~~g~ 60 (252)
.+.|++.|++++.+ +|++++.++++ +.|.+.+|.++.||.||.|+|.|+..+.+++|.
T Consensus 172 ~~~a~~~gv~~~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A~G~~s~~~~~~lg~ 231 (538)
T 2aqj_A 172 KRWAVERGVNRVVD-EVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSGMRGLLINQALKE 231 (538)
T ss_dssp HHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEETTSCEECCSEEEECCGGGCCCCCCCTCC
T ss_pred HHHHHHCCCEEEEe-eEeEEEEcCCCcEEEEEECCCcEEEeCEEEECCCCchhhHHHHhCC
Confidence 45677889999999 89999886543 568888886799999999999999765555664
No 58
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=97.04 E-value=0.00091 Score=60.48 Aligned_cols=58 Identities=12% Similarity=0.111 Sum_probs=45.9
Q ss_pred hhHHHhCCcEEEeCceeEEEEEcCCeE---EEEeCCCc--EEEcCEEEEcCCCChHHHHHHcCC
Q psy3952 2 GEEFCELGGEIRLNQQVESFKENPESV---TISTKQGD--HLESSYALVCAGLQADEMALKSGC 60 (252)
Q Consensus 2 ~~~a~~~G~~i~~~~~V~~i~~~~~~~---~V~t~~g~--~i~A~~VV~AaG~ws~~l~~~~g~ 60 (252)
.+.+++.|++++.+++|+++..+++++ .+.+.+|. +++||.||.|+|.++. +.+.+|.
T Consensus 118 ~~~a~~~Gv~i~~~~~V~~v~~~~~~v~gv~~~~~dG~~~~i~ad~VI~AdG~~S~-vr~~lg~ 180 (512)
T 3e1t_A 118 LRNSERKGVDVRERHEVIDVLFEGERAVGVRYRNTEGVELMAHARFIVDASGNRTR-VSQAVGE 180 (512)
T ss_dssp HHHHHHTTCEEESSCEEEEEEEETTEEEEEEEECSSSCEEEEEEEEEEECCCTTCS-SGGGTCC
T ss_pred HHHHHhCCCEEEcCCEEEEEEEECCEEEEEEEEeCCCCEEEEEcCEEEECCCcchH-HHHHcCC
Confidence 456778999999999999999988764 45556663 7999999999999985 4455564
No 59
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=96.95 E-value=0.0011 Score=59.70 Aligned_cols=58 Identities=12% Similarity=0.125 Sum_probs=48.1
Q ss_pred hHHHhCCcEEEeCceeEEEEEcCCeEEEEeCCCcEEEcCEEEEcCCCChHH-HHHHcCC
Q psy3952 3 EEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQADE-MALKSGC 60 (252)
Q Consensus 3 ~~a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g~~i~A~~VV~AaG~ws~~-l~~~~g~ 60 (252)
+.++++|++++++++|++|+.+++...|.+.+|.++.||.||+|+|.+.+. +++.+|+
T Consensus 265 ~~l~~~GV~v~~~~~v~~i~~~~~v~~v~~~~g~~i~aD~Vv~a~G~~p~~~l~~~~g~ 323 (493)
T 1y56_A 265 QELERWGIDYVHIPNVKRVEGNEKVERVIDMNNHEYKVDALIFADGRRPDINPITQAGG 323 (493)
T ss_dssp HHHHHHTCEEEECSSEEEEECSSSCCEEEETTCCEEECSEEEECCCEEECCHHHHHTTC
T ss_pred HHHHhCCcEEEeCCeeEEEecCCceEEEEeCCCeEEEeCEEEECCCcCcCchHHHhcCC
Confidence 356788999999999999986654445777777689999999999999764 8888886
No 60
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=96.95 E-value=0.00052 Score=62.28 Aligned_cols=58 Identities=17% Similarity=0.209 Sum_probs=45.9
Q ss_pred hhHHHh-CCcEEEeCceeEEEEEcCCe--EEEEeCCCcEEEcCEEEEcCCCChHHHHHHcCC
Q psy3952 2 GEEFCE-LGGEIRLNQQVESFKENPES--VTISTKQGDHLESSYALVCAGLQADEMALKSGC 60 (252)
Q Consensus 2 ~~~a~~-~G~~i~~~~~V~~i~~~~~~--~~V~t~~g~~i~A~~VV~AaG~ws~~l~~~~g~ 60 (252)
.+.|++ .|++++.+ +|++++.++++ +.|.+.+|.+++||.||.|+|.||..+.+++|.
T Consensus 182 ~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~~S~~~~~~lg~ 242 (526)
T 2pyx_A 182 TEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAKSLLLGEHLQV 242 (526)
T ss_dssp HHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECSGGGCCCCCCCTCC
T ss_pred HHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEECCCCEEEcCEEEECCCcchHHHHHHhCC
Confidence 456777 89999999 69999886544 357787765799999999999999755666664
No 61
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=96.94 E-value=0.0012 Score=57.07 Aligned_cols=55 Identities=16% Similarity=0.232 Sum_probs=45.8
Q ss_pred hhHHHhCCcEEEeCceeEEEEEcCCeEEEEeCCCcEEEcCEEEEcCCCChHHHHHHcCC
Q psy3952 2 GEEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQADEMALKSGC 60 (252)
Q Consensus 2 ~~~a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g~~i~A~~VV~AaG~ws~~l~~~~g~ 60 (252)
.+.+++.|++++.+++|++++. ++ .|++.+|.++.||.||.|.|.++. +.++++.
T Consensus 114 ~~~~~~~gv~i~~~~~v~~i~~-~~--~v~~~~g~~~~ad~vV~AdG~~s~-vr~~l~~ 168 (379)
T 3alj_A 114 VNRARALGVDISVNSEAVAADP-VG--RLTLQTGEVLEADLIVGADGVGSK-VRDSIGF 168 (379)
T ss_dssp HHHHHHTTCEEESSCCEEEEET-TT--EEEETTSCEEECSEEEECCCTTCH-HHHHHCC
T ss_pred HHHHHhcCCEEEeCCEEEEEEe-CC--EEEECCCCEEEcCEEEECCCccHH-HHHHhcC
Confidence 4567788999999999999987 33 778877868999999999999985 6666764
No 62
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=96.93 E-value=0.0011 Score=60.74 Aligned_cols=51 Identities=22% Similarity=0.215 Sum_probs=41.1
Q ss_pred hhHHHhCCcEEEeCceeEEEEEcC-CeE---EEEeCCCc--EEEcCEEEEcCCCChH
Q psy3952 2 GEEFCELGGEIRLNQQVESFKENP-ESV---TISTKQGD--HLESSYALVCAGLQAD 52 (252)
Q Consensus 2 ~~~a~~~G~~i~~~~~V~~i~~~~-~~~---~V~t~~g~--~i~A~~VV~AaG~ws~ 52 (252)
.+.+++.|++|+++++|++|..++ +++ .+.+.+|. .+.|+.||+|+|.|+.
T Consensus 257 ~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s~ 313 (566)
T 1qo8_A 257 RKAAKEQGIDTRLNSRVVKLVVNDDHSVVGAVVHGKHTGYYMIGAKSVVLATGGYGM 313 (566)
T ss_dssp HHHHHHTTCCEECSEEEEEEEECTTSBEEEEEEEETTTEEEEEEEEEEEECCCCCTT
T ss_pred HHHHHhcCCEEEeCCEEEEEEECCCCcEEEEEEEeCCCcEEEEEcCEEEEecCCccc
Confidence 456788899999999999999877 654 34444663 5899999999999985
No 63
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=96.93 E-value=0.00082 Score=58.99 Aligned_cols=46 Identities=22% Similarity=0.395 Sum_probs=40.0
Q ss_pred HHhCCcEEEeCceeEEEEEcCCeEEEEeCCCcEEEcCEEEEcCCCCh
Q psy3952 5 FCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQA 51 (252)
Q Consensus 5 a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g~~i~A~~VV~AaG~ws 51 (252)
+++.| +|+++++|++|+.++++++|+|.+|.+++||+||+|+|+..
T Consensus 214 ~~~~g-~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vi~a~~~~~ 259 (431)
T 3k7m_X 214 SQEIP-EIRLQTVVTGIDQSGDVVNVTVKDGHAFQAHSVIVATPMNT 259 (431)
T ss_dssp HTTCS-CEESSCCEEEEECSSSSEEEEETTSCCEEEEEEEECSCGGG
T ss_pred HhhCC-ceEeCCEEEEEEEcCCeEEEEECCCCEEEeCEEEEecCcch
Confidence 44567 99999999999988888999998885699999999999653
No 64
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=96.92 E-value=0.001 Score=60.15 Aligned_cols=51 Identities=16% Similarity=0.120 Sum_probs=39.3
Q ss_pred hhHHHhCCcEEEeCceeEEEEEc-CCeEE-EE--eCCC-cEEEcC-EEEEcCCCChH
Q psy3952 2 GEEFCELGGEIRLNQQVESFKEN-PESVT-IS--TKQG-DHLESS-YALVCAGLQAD 52 (252)
Q Consensus 2 ~~~a~~~G~~i~~~~~V~~i~~~-~~~~~-V~--t~~g-~~i~A~-~VV~AaG~ws~ 52 (252)
.+.++++|++|+++++|++|..+ ++++. |. .+.+ .+|.|+ .||+|+|.|+.
T Consensus 209 ~~~~~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~~g~~~~i~A~k~VVlAtGG~~~ 265 (510)
T 4at0_A 209 VETAEKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQYGKEVAVRARRGVVLATGSFAY 265 (510)
T ss_dssp HHHHHHTTCEEECSEEEEEEEECTTCCEEEEEEEETTEEEEEEEEEEEEECCCCCTT
T ss_pred HHHHHHcCCEEEecCEeEEEEECCCCcEEEEEEEECCcEEEEEeCCeEEEeCCChhh
Confidence 46678899999999999999987 45543 43 3322 259995 99999999983
No 65
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=96.91 E-value=0.0015 Score=59.80 Aligned_cols=51 Identities=10% Similarity=0.107 Sum_probs=40.6
Q ss_pred hhHHHhCCcEEEeCceeEEEEEcC-CeE---EEEeCCCc--EEEcCEEEEcCCCChH
Q psy3952 2 GEEFCELGGEIRLNQQVESFKENP-ESV---TISTKQGD--HLESSYALVCAGLQAD 52 (252)
Q Consensus 2 ~~~a~~~G~~i~~~~~V~~i~~~~-~~~---~V~t~~g~--~i~A~~VV~AaG~ws~ 52 (252)
.+.+++.|++|+++++|++|..++ +++ .+.+.+|. +|.|+.||+|+|.|+.
T Consensus 262 ~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~~~ 318 (571)
T 1y0p_A 262 YDNAVKRNIDLRMNTRGIEVLKDDKGTVKGILVKGMYKGYYWVKADAVILATGGFAK 318 (571)
T ss_dssp HHHHHHTTCEEESSEEEEEEEECTTSCEEEEEEEETTTEEEEEECSEEEECCCCCTT
T ss_pred HHHHHhcCCEEEeCCEeeEeEEcCCCeEEEEEEEeCCCcEEEEECCeEEEeCCCccc
Confidence 456788999999999999999876 553 34443563 5899999999999974
No 66
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=96.88 E-value=0.0012 Score=56.12 Aligned_cols=45 Identities=13% Similarity=0.233 Sum_probs=39.6
Q ss_pred HHhCCcEEEeCceeEEEEEcCCeEEEEeCCCcEEEcCEEEEcCCC
Q psy3952 5 FCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGL 49 (252)
Q Consensus 5 a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g~~i~A~~VV~AaG~ 49 (252)
+++.|++|+++++|++|++++++|+|++.+|.++.||.||+|+.+
T Consensus 119 ~~~~g~~i~~~~~V~~i~~~~~~~~v~~~~g~~~~ad~vV~A~p~ 163 (342)
T 3qj4_A 119 LKESGAEVYFRHRVTQINLRDDKWEVSKQTGSPEQFDLIVLTMPV 163 (342)
T ss_dssp HHHHTCEEESSCCEEEEEECSSSEEEEESSSCCEEESEEEECSCH
T ss_pred HHhcCCEEEeCCEEEEEEEcCCEEEEEECCCCEEEcCEEEECCCH
Confidence 344599999999999999998899999988856999999999875
No 67
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=96.85 E-value=0.0012 Score=59.54 Aligned_cols=51 Identities=25% Similarity=0.343 Sum_probs=44.6
Q ss_pred hHHHhCCcEEEeCceeEEEEEcCCeEEEEeCCCcEEEcCEEEEcCCCChHH
Q psy3952 3 EEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQADE 53 (252)
Q Consensus 3 ~~a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g~~i~A~~VV~AaG~ws~~ 53 (252)
+.+++.|++++++++|++|+.+++++.|.+.+|.++.||.||+|+|.+.+.
T Consensus 231 ~~l~~~GV~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~~p~~ 281 (499)
T 1xdi_A 231 ESFAERGVRLFKNARAASVTRTGAGVLVTMTDGRTVEGSHALMTIGSVPNT 281 (499)
T ss_dssp HHHHHTTCEEETTCCEEEEEECSSSEEEEETTSCEEEESEEEECCCEEECC
T ss_pred HHHHHCCCEEEeCCEEEEEEEeCCEEEEEECCCcEEEcCEEEECCCCCcCC
Confidence 456789999999999999998777788888777689999999999999764
No 68
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=96.85 E-value=0.0013 Score=57.09 Aligned_cols=58 Identities=14% Similarity=0.185 Sum_probs=46.3
Q ss_pred hhHHHhCCcEEEeCceeEEEEEcC-CeEEEEe-CCCc--EEEcCEEEEcCCCChHHHHHHcCC
Q psy3952 2 GEEFCELGGEIRLNQQVESFKENP-ESVTIST-KQGD--HLESSYALVCAGLQADEMALKSGC 60 (252)
Q Consensus 2 ~~~a~~~G~~i~~~~~V~~i~~~~-~~~~V~t-~~g~--~i~A~~VV~AaG~ws~~l~~~~g~ 60 (252)
.+.+.+.|++++.+++|++++.++ +.+.|++ .+|. +++||.||.|.|.+|. +.+.++.
T Consensus 110 ~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~~g~~~~~~a~~vV~AdG~~S~-vr~~l~~ 171 (394)
T 1k0i_A 110 MEAREACGATTVYQAAEVRLHDLQGERPYVTFERDGERLRLDCDYIAGCDGFHGI-SRQSIPA 171 (394)
T ss_dssp HHHHHHTTCEEESSCEEEEEECTTSSSCEEEEEETTEEEEEECSEEEECCCTTCS-TGGGSCG
T ss_pred HHHHHhcCCeEEeceeEEEEEEecCCceEEEEecCCcEEEEEeCEEEECCCCCcH-HHHhcCc
Confidence 355677899999999999998764 4577765 6774 5999999999999996 5566664
No 69
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=96.85 E-value=0.0012 Score=55.79 Aligned_cols=44 Identities=7% Similarity=0.058 Sum_probs=39.0
Q ss_pred CCcEEEeCceeEEEEEcCCeEEEEeCCCcEEE-cCEEEEcCCCCh
Q psy3952 8 LGGEIRLNQQVESFKENPESVTISTKQGDHLE-SSYALVCAGLQA 51 (252)
Q Consensus 8 ~G~~i~~~~~V~~i~~~~~~~~V~t~~g~~i~-A~~VV~AaG~ws 51 (252)
.|++|+++++|++|+.++++|.|++.+|..+. |+.||+|.|+++
T Consensus 118 ~g~~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~a~~vV~a~g~~~ 162 (336)
T 1yvv_A 118 GDMPVSFSCRITEVFRGEEHWNLLDAEGQNHGPFSHVIIATPAPQ 162 (336)
T ss_dssp TTCCEECSCCEEEEEECSSCEEEEETTSCEEEEESEEEECSCHHH
T ss_pred ccCcEEecCEEEEEEEeCCEEEEEeCCCcCccccCEEEEcCCHHH
Confidence 39999999999999999889999999885554 899999999875
No 70
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=96.81 E-value=0.0022 Score=58.91 Aligned_cols=51 Identities=22% Similarity=0.281 Sum_probs=39.7
Q ss_pred hhHHHhCCcEEEeCceeEEEEEcC-CeE---EEEeCCCc--EEEcCEEEEcCCCChH
Q psy3952 2 GEEFCELGGEIRLNQQVESFKENP-ESV---TISTKQGD--HLESSYALVCAGLQAD 52 (252)
Q Consensus 2 ~~~a~~~G~~i~~~~~V~~i~~~~-~~~---~V~t~~g~--~i~A~~VV~AaG~ws~ 52 (252)
.+.+++.|++|+++++|++|..++ +++ .+.+.+|. +|.|+.||+|+|.|+.
T Consensus 262 ~~~~~~~gv~i~~~t~v~~l~~~~~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~~~ 318 (572)
T 1d4d_A 262 WDNAVKRGTDIRLNSRVVRILEDASGKVTGVLVKGEYTGYYVIKADAVVIAAGGFAK 318 (572)
T ss_dssp HHHHHHTTCEEESSEEEEEEEEC--CCEEEEEEEETTTEEEEEECSEEEECCCCCTT
T ss_pred HHHHHHcCCeEEecCEEEEEEECCCCeEEEEEEEeCCCcEEEEEcCEEEEeCCCCcc
Confidence 456788999999999999998776 553 34443562 5899999999999984
No 71
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=96.79 E-value=0.0032 Score=57.92 Aligned_cols=60 Identities=23% Similarity=0.265 Sum_probs=46.0
Q ss_pred ChhHHHhCCcEEEeCceeEEEEEcC-CeEE-EEeCC------C---------cEEEcCEEEEcCCCChH---HHHHHcCC
Q psy3952 1 MGEEFCELGGEIRLNQQVESFKENP-ESVT-ISTKQ------G---------DHLESSYALVCAGLQAD---EMALKSGC 60 (252)
Q Consensus 1 l~~~a~~~G~~i~~~~~V~~i~~~~-~~~~-V~t~~------g---------~~i~A~~VV~AaG~ws~---~l~~~~g~ 60 (252)
|.+.|++.|++|+.+++|+++..++ +.+. |.+.+ | .+++||.||.|.|.++. .+.+.+|+
T Consensus 150 L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S~vr~~l~~~~gl 229 (584)
T 2gmh_A 150 MGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHGHLAKQLYKKFDL 229 (584)
T ss_dssp HHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTTCHHHHHHHHHTTT
T ss_pred HHHHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCCchHHHHHHHHhCC
Confidence 3567788899999999999999876 4454 77652 2 47999999999999985 44444565
No 72
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=96.77 E-value=0.0023 Score=54.01 Aligned_cols=49 Identities=18% Similarity=0.378 Sum_probs=42.6
Q ss_pred hHHHhCCcEEEeCceeEEEEEcCCeEEEEeCCCcEEEcCEEEEcCCCCh
Q psy3952 3 EEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQA 51 (252)
Q Consensus 3 ~~a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g~~i~A~~VV~AaG~ws 51 (252)
+.+++.|++++.+++|++++.+++.|.|.+.+|.++.+|+||+|+|..+
T Consensus 73 ~~~~~~~~~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~ 121 (335)
T 2zbw_A 73 EQVAPFNPVYSLGERAETLEREGDLFKVTTSQGNAYTAKAVIIAAGVGA 121 (335)
T ss_dssp HHHGGGCCEEEESCCEEEEEEETTEEEEEETTSCEEEEEEEEECCTTSE
T ss_pred HHHHHcCCEEEeCCEEEEEEECCCEEEEEECCCCEEEeCEEEECCCCCC
Confidence 4566779999999999999988778999998886899999999999864
No 73
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=96.75 E-value=0.0018 Score=56.84 Aligned_cols=58 Identities=22% Similarity=0.417 Sum_probs=48.6
Q ss_pred hHHHhCCcEEEeCceeEEEEEcCCeEEEEeCCCcEEEcCEEEEcCCCChH-HHHHHcCC
Q psy3952 3 EEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQAD-EMALKSGC 60 (252)
Q Consensus 3 ~~a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g~~i~A~~VV~AaG~ws~-~l~~~~g~ 60 (252)
+.++++|++++++++|++++.++....|.+.+|.++.||.||+|+|...+ .+++.+|+
T Consensus 193 ~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~dg~~i~aD~Vv~a~G~~p~~~l~~~~gl 251 (410)
T 3ef6_A 193 GLLTELGVQVELGTGVVGFSGEGQLEQVMASDGRSFVADSALICVGAEPADQLARQAGL 251 (410)
T ss_dssp HHHHHHTCEEECSCCEEEEECSSSCCEEEETTSCEEECSEEEECSCEEECCHHHHHTTC
T ss_pred HHHHHCCCEEEeCCEEEEEeccCcEEEEEECCCCEEEcCEEEEeeCCeecHHHHHhCCC
Confidence 45678899999999999998766545788888878999999999999876 47777876
No 74
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=96.75 E-value=0.00091 Score=59.68 Aligned_cols=43 Identities=28% Similarity=0.459 Sum_probs=39.5
Q ss_pred CcEEEeCceeEEEEEcCCeEEEEeCCCcEEEcCEEEEcCCCCh
Q psy3952 9 GGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQA 51 (252)
Q Consensus 9 G~~i~~~~~V~~i~~~~~~~~V~t~~g~~i~A~~VV~AaG~ws 51 (252)
|++|+++++|++|+.++++++|+|.+|.+++||+||+|++++.
T Consensus 228 ~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vI~a~~~~~ 270 (472)
T 1b37_A 228 DPRLQLNKVVREIKYSPGGVTVKTEDNSVYSADYVMVSASLGV 270 (472)
T ss_dssp CTTEESSCCEEEEEECSSCEEEEETTSCEEEESEEEECSCHHH
T ss_pred ccEEEcCCEEEEEEEcCCcEEEEECCCCEEEcCEEEEecCHHH
Confidence 7899999999999999888999999887899999999999864
No 75
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=96.72 E-value=0.0029 Score=57.73 Aligned_cols=55 Identities=20% Similarity=0.418 Sum_probs=43.6
Q ss_pred hHHHhCCcEEEeCceeEEEEEcCCeEEEEeCC---C--cEEEcCEEEEcCCCChHHHHHHcCCC
Q psy3952 3 EEFCELGGEIRLNQQVESFKENPESVTISTKQ---G--DHLESSYALVCAGLQADEMALKSGCS 61 (252)
Q Consensus 3 ~~a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~---g--~~i~A~~VV~AaG~ws~~l~~~~g~~ 61 (252)
+.+++. |+.+++|++++.++++|+|++.+ | .+++||+||.|.|.+|. +.+++|+.
T Consensus 146 ~~a~~~---v~~~~~v~~~~~~~~~v~v~~~~~~~G~~~~i~a~~vVgADG~~S~-vR~~lg~~ 205 (549)
T 2r0c_A 146 EAVGER---LRTRSRLDSFEQRDDHVRATITDLRTGATRAVHARYLVACDGASSP-TRKALGID 205 (549)
T ss_dssp HHHGGG---EECSEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEEEECCCTTCH-HHHHHTCC
T ss_pred HHHHHh---cccCcEEEEEEEeCCEEEEEEEECCCCCEEEEEeCEEEECCCCCcH-HHHHcCCC
Confidence 445554 88999999999988888765433 5 46999999999999997 77778763
No 76
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=96.70 E-value=0.0018 Score=58.26 Aligned_cols=58 Identities=24% Similarity=0.340 Sum_probs=48.5
Q ss_pred hHHHhCCcEEEeCceeEEEEEcCCeEEEEeCCCcEEEcCEEEEcCCCChH-HHHHHcCC
Q psy3952 3 EEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQAD-EMALKSGC 60 (252)
Q Consensus 3 ~~a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g~~i~A~~VV~AaG~ws~-~l~~~~g~ 60 (252)
+.++++|++++++++|++++.+++.+.|.+.+|.++.||.||+|+|...+ .+++.+|+
T Consensus 234 ~~l~~~GV~v~~~~~V~~i~~~~~~~~v~l~dG~~i~aD~Vv~a~G~~pn~~l~~~~gl 292 (493)
T 1m6i_A 234 EKVRREGVKVMPNAIVQSVGVSSGKLLIKLKDGRKVETDHIVAAVGLEPNVELAKTGGL 292 (493)
T ss_dssp HHHHTTTCEEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECCCEEECCTTHHHHTC
T ss_pred HHHHhcCCEEEeCCEEEEEEecCCeEEEEECCCCEEECCEEEECCCCCccHHHHHHcCC
Confidence 45678899999999999998777777788888878999999999999865 36666665
No 77
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=96.69 E-value=0.0021 Score=58.60 Aligned_cols=50 Identities=14% Similarity=0.216 Sum_probs=42.9
Q ss_pred hHHHhCCc--EEEeCceeEEEEEcCC--eEEEEeCCCcEEEcCEEEEcCCCChH
Q psy3952 3 EEFCELGG--EIRLNQQVESFKENPE--SVTISTKQGDHLESSYALVCAGLQAD 52 (252)
Q Consensus 3 ~~a~~~G~--~i~~~~~V~~i~~~~~--~~~V~t~~g~~i~A~~VV~AaG~ws~ 52 (252)
+.+++.|+ .++++++|++++.+++ .|.|++.+|.++.||+||+|+|.++.
T Consensus 95 ~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~AtG~~s~ 148 (540)
T 3gwf_A 95 DVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGLLSA 148 (540)
T ss_dssp HHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEEECCCSCCS
T ss_pred HHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEEECCccccc
Confidence 34677888 8999999999988664 79999999967999999999999864
No 78
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=96.63 E-value=0.0026 Score=57.01 Aligned_cols=58 Identities=10% Similarity=0.221 Sum_probs=47.8
Q ss_pred hHHHhCCcEEEeCceeEEEEEcCCeEEEEeCCCcEEEcCEEEEcCCCChHHH---HHHcCC
Q psy3952 3 EEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQADEM---ALKSGC 60 (252)
Q Consensus 3 ~~a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g~~i~A~~VV~AaG~ws~~l---~~~~g~ 60 (252)
+.+++.|++++++++|++++.+++++.|.+.+|.++.||.||+|+|...+.- ++.+|+
T Consensus 240 ~~l~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vi~A~G~~p~~~~l~l~~~g~ 300 (484)
T 3o0h_A 240 DAMVAKGISIIYEATVSQVQSTENCYNVVLTNGQTICADRVMLATGRVPNTTGLGLERAGV 300 (484)
T ss_dssp HHHHHHTCEEESSCCEEEEEECSSSEEEEETTSCEEEESEEEECCCEEECCTTCCHHHHTC
T ss_pred HHHHHCCCEEEeCCEEEEEEeeCCEEEEEECCCcEEEcCEEEEeeCCCcCCCCCChhhcCc
Confidence 4577889999999999999988888888888887899999999999876432 344554
No 79
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=96.62 E-value=0.0018 Score=57.37 Aligned_cols=49 Identities=18% Similarity=0.102 Sum_probs=40.7
Q ss_pred HHHhCCcEEEeCceeEEEEEcCCeEEEEeCC---Cc---EEEcCEEEEcCCCChH
Q psy3952 4 EFCELGGEIRLNQQVESFKENPESVTISTKQ---GD---HLESSYALVCAGLQAD 52 (252)
Q Consensus 4 ~a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~---g~---~i~A~~VV~AaG~ws~ 52 (252)
.+++.+..++.+++|++++..+++|.|++.+ |. ++.+|.||+|+|.++.
T Consensus 124 ~~~~~~~~i~~~t~V~~v~~~~~~~~V~~~~~~~G~~~~~~~~d~VVvAtG~~s~ 178 (447)
T 2gv8_A 124 YAQPLLPFIKLATDVLDIEKKDGSWVVTYKGTKAGSPISKDIFDAVSICNGHYEV 178 (447)
T ss_dssp HHGGGGGGEECSEEEEEEEEETTEEEEEEEESSTTCCEEEEEESEEEECCCSSSS
T ss_pred HHHHhhCeEEeCCEEEEEEeCCCeEEEEEeecCCCCeeEEEEeCEEEECCCCCCC
Confidence 3455578899999999999888889887754 65 6999999999999874
No 80
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=96.62 E-value=0.002 Score=57.39 Aligned_cols=49 Identities=20% Similarity=0.274 Sum_probs=43.2
Q ss_pred hHHHhCCcEEEeCceeEEEEEcCCeEEEEeCCCcEEEcCEEEEcCCCChH
Q psy3952 3 EEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQAD 52 (252)
Q Consensus 3 ~~a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g~~i~A~~VV~AaG~ws~ 52 (252)
+.++++|++++++++|++++.+++.+.|.++++ ++.||.||+|+|.+.+
T Consensus 224 ~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~~-~i~aD~Vv~a~G~~p~ 272 (467)
T 1zk7_A 224 AAFRAEGIEVLEHTQASQVAHMDGEFVLTTTHG-ELRADKLLVATGRTPN 272 (467)
T ss_dssp HHHHHTTCEEETTCCEEEEEEETTEEEEEETTE-EEEESEEEECSCEEES
T ss_pred HHHHhCCCEEEcCCEEEEEEEeCCEEEEEECCc-EEEcCEEEECCCCCcC
Confidence 457789999999999999998777778888766 8999999999999975
No 81
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=96.60 E-value=0.0022 Score=56.92 Aligned_cols=51 Identities=22% Similarity=0.299 Sum_probs=44.1
Q ss_pred hHHHhCCcEEEeCceeEEEEEcCCeEEEEeCCCcEEEcCEEEEcCCCChHH
Q psy3952 3 EEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQADE 53 (252)
Q Consensus 3 ~~a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g~~i~A~~VV~AaG~ws~~ 53 (252)
+.++++|++++++++|++++.+++++.|++.+|.++.+|.||+|+|.+.+.
T Consensus 216 ~~l~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~~D~vv~A~G~~p~~ 266 (455)
T 2yqu_A 216 RVFKKQGLTIRTGVRVTAVVPEAKGARVELEGGEVLEADRVLVAVGRRPYT 266 (455)
T ss_dssp HHHHHHTCEEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEECC
T ss_pred HHHHHCCCEEEECCEEEEEEEeCCEEEEEECCCeEEEcCEEEECcCCCcCC
Confidence 456788999999999999998877788887777689999999999998754
No 82
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=96.60 E-value=0.0028 Score=58.92 Aligned_cols=58 Identities=19% Similarity=0.326 Sum_probs=46.2
Q ss_pred hhHHHhCCc--EEEeCceeEEEEEcCC----eEEEEeC------CC--cEEEcCEEEEcCCCChHHHHHHcCC
Q psy3952 2 GEEFCELGG--EIRLNQQVESFKENPE----SVTISTK------QG--DHLESSYALVCAGLQADEMALKSGC 60 (252)
Q Consensus 2 ~~~a~~~G~--~i~~~~~V~~i~~~~~----~~~V~t~------~g--~~i~A~~VV~AaG~ws~~l~~~~g~ 60 (252)
.+.+++.|+ +|+.+++|++++.+++ +++|+.. +| .+++|++||.|.|.+|. +.+++|+
T Consensus 148 ~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~~~~~G~~~~i~a~~vVgADG~~S~-vR~~lg~ 219 (639)
T 2dkh_A 148 LERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTVTLERCDAAHAGQIETVQARYVVGCDGARSN-VRRAIGR 219 (639)
T ss_dssp HHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEEEEEECSGGGTTCEEEEEEEEEEECCCTTCH-HHHHTTC
T ss_pred HHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEEEEEeccccCCCCeEEEEeCEEEECCCcchH-HHHHhCC
Confidence 466788887 9999999999998752 4666432 44 46999999999999996 7777886
No 83
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=96.59 E-value=0.0028 Score=55.15 Aligned_cols=51 Identities=10% Similarity=0.128 Sum_probs=44.4
Q ss_pred CCcEEEeCceeEEEEEcCCeEEEEeCCCcEEEcCEEEEcCCCChHHHHHHcC
Q psy3952 8 LGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQADEMALKSG 59 (252)
Q Consensus 8 ~G~~i~~~~~V~~i~~~~~~~~V~t~~g~~i~A~~VV~AaG~ws~~l~~~~g 59 (252)
.|++++.+++|++++.++++|+|++.+|.++.||.||.|.|.+|. +.+.++
T Consensus 110 ~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S~-vr~~~~ 160 (397)
T 2vou_A 110 GPERYHTSKCLVGLSQDSETVQMRFSDGTKAEANWVIGADGGASV-VRKRLL 160 (397)
T ss_dssp CSTTEETTCCEEEEEECSSCEEEEETTSCEEEESEEEECCCTTCH-HHHHHH
T ss_pred CCcEEEcCCEEEEEEecCCEEEEEECCCCEEECCEEEECCCcchh-HHHHhc
Confidence 489999999999999988889999888878999999999999985 445555
No 84
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=96.57 E-value=0.0022 Score=57.90 Aligned_cols=47 Identities=19% Similarity=0.288 Sum_probs=41.7
Q ss_pred HHhCCcEEEeCceeEEEEEcCCeEEEEeCCCcEEEcCEEEEcCCCCh
Q psy3952 5 FCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQA 51 (252)
Q Consensus 5 a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g~~i~A~~VV~AaG~ws 51 (252)
+++.|++|+++++|++|+.++++|+|.+.+|.++.||+||+|++++.
T Consensus 222 ~~~lg~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~VI~a~p~~~ 268 (520)
T 1s3e_A 222 MDLLGDRVKLERPVIYIDQTRENVLVETLNHEMYEAKYVISAIPPTL 268 (520)
T ss_dssp HHHHGGGEESSCCEEEEECSSSSEEEEETTSCEEEESEEEECSCGGG
T ss_pred HHHcCCcEEcCCeeEEEEECCCeEEEEECCCeEEEeCEEEECCCHHH
Confidence 44558999999999999988888999998887899999999999986
No 85
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=96.54 E-value=0.0025 Score=57.28 Aligned_cols=58 Identities=14% Similarity=0.261 Sum_probs=47.0
Q ss_pred hHHHhCCcEEEeCceeEEEEEcCC-eEEEEeCCCcEEEcCEEEEcCCCChHH--H-HHHcCC
Q psy3952 3 EEFCELGGEIRLNQQVESFKENPE-SVTISTKQGDHLESSYALVCAGLQADE--M-ALKSGC 60 (252)
Q Consensus 3 ~~a~~~G~~i~~~~~V~~i~~~~~-~~~V~t~~g~~i~A~~VV~AaG~ws~~--l-~~~~g~ 60 (252)
+.+++.|++++++++|++++.+++ .+.|++.+|.++.||.||+|+|.+.+. | ++.+|+
T Consensus 239 ~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~~~L~l~~~gl 300 (490)
T 1fec_A 239 EQLRANGINVRTHENPAKVTKNADGTRHVVFESGAEADYDVVMLAIGRVPRSQTLQLEKAGV 300 (490)
T ss_dssp HHHHHTTEEEEETCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEESCTTSCGGGGTC
T ss_pred HHHHhCCCEEEeCCEEEEEEEcCCCEEEEEECCCcEEEcCEEEEccCCCcCccccCchhcCc
Confidence 457789999999999999998764 477888888679999999999998764 3 455554
No 86
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=96.52 E-value=0.0029 Score=52.72 Aligned_cols=48 Identities=13% Similarity=0.251 Sum_probs=40.9
Q ss_pred hHHHhCCcEEEeCceeEEEEEcCCeEEEEeCCCcEEEcCEEEEcCCCCh
Q psy3952 3 EEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQA 51 (252)
Q Consensus 3 ~~a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g~~i~A~~VV~AaG~ws 51 (252)
+.+++.|+++++ ++|++++.+++.|.|.+.+|.++.+|+||+|+|.+.
T Consensus 78 ~~~~~~~v~~~~-~~v~~i~~~~~~~~v~~~~g~~~~~d~lvlAtG~~~ 125 (323)
T 3f8d_A 78 KHIEKYEVPVLL-DIVEKIENRGDEFVVKTKRKGEFKADSVILGIGVKR 125 (323)
T ss_dssp HHHHTTTCCEEE-SCEEEEEEC--CEEEEESSSCEEEEEEEEECCCCEE
T ss_pred HHHHHcCCEEEE-EEEEEEEecCCEEEEEECCCCEEEcCEEEECcCCCC
Confidence 456778999999 999999998888999998876899999999999984
No 87
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=96.50 E-value=0.0045 Score=54.61 Aligned_cols=58 Identities=26% Similarity=0.391 Sum_probs=47.8
Q ss_pred hHHHhCCcEEEeCceeEEEEE--cCCeE-EEEeCCCcEEEcCEEEEcCCCChH-HHHHHcCC
Q psy3952 3 EEFCELGGEIRLNQQVESFKE--NPESV-TISTKQGDHLESSYALVCAGLQAD-EMALKSGC 60 (252)
Q Consensus 3 ~~a~~~G~~i~~~~~V~~i~~--~~~~~-~V~t~~g~~i~A~~VV~AaG~ws~-~l~~~~g~ 60 (252)
+.+++.|++++++++|++++. +++++ .|.+.+|.++.||.||+|+|...+ .+++.+|+
T Consensus 199 ~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~i~~D~Vv~a~G~~p~~~l~~~~gl 260 (431)
T 1q1r_A 199 HLHREAGVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTRLPADLVIAGIGLIPNCELASAAGL 260 (431)
T ss_dssp HHHHHHTCEEECSCCEEEEEECTTTCCEEEEEETTSCEEECSEEEECCCEEECCHHHHHTTC
T ss_pred HHHHhCCeEEEeCCEEEEEEeccCCCcEEEEEeCCCCEEEcCEEEECCCCCcCcchhhccCC
Confidence 456788999999999999987 55555 588888878999999999998854 57777776
No 88
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=96.50 E-value=0.0022 Score=55.78 Aligned_cols=44 Identities=5% Similarity=0.125 Sum_probs=39.6
Q ss_pred CcEEEeCceeEEEEEcCCeEEEEeCCCcEEEcCEEEEcCCCChH
Q psy3952 9 GGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQAD 52 (252)
Q Consensus 9 G~~i~~~~~V~~i~~~~~~~~V~t~~g~~i~A~~VV~AaG~ws~ 52 (252)
+++++.+++|++++.++++|+|++.+|.+++||.||.|.|.+|.
T Consensus 140 ~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S~ 183 (398)
T 2xdo_A 140 NDTVIWDRKLVMLEPGKKKWTLTFENKPSETADLVILANGGMSK 183 (398)
T ss_dssp TTSEEESCCEEEEEECSSSEEEEETTSCCEEESEEEECSCTTCS
T ss_pred CCEEEECCEEEEEEECCCEEEEEECCCcEEecCEEEECCCcchh
Confidence 36889999999999988889999888878999999999999984
No 89
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=96.48 E-value=0.0034 Score=52.34 Aligned_cols=48 Identities=15% Similarity=0.299 Sum_probs=40.9
Q ss_pred hHHHhCCcEEEeCceeEEEEEcCCeEEEEeCCCcEEEcCEEEEcCCCCh
Q psy3952 3 EEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQA 51 (252)
Q Consensus 3 ~~a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g~~i~A~~VV~AaG~ws 51 (252)
+.+++.|++++. ++|++++.+++.|.|.+.+|.++.+|+||+|+|.++
T Consensus 67 ~~~~~~~v~~~~-~~v~~i~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~ 114 (311)
T 2q0l_A 67 EQCFRFGLKHEM-TAVQRVSKKDSHFVILAEDGKTFEAKSVIIATGGSP 114 (311)
T ss_dssp HHHHTTSCEEEC-SCEEEEEEETTEEEEEETTSCEEEEEEEEECCCEEE
T ss_pred HHHHHcCCEEEE-EEEEEEEEcCCEEEEEEcCCCEEECCEEEECCCCCC
Confidence 346678999988 899999988888888777776899999999999865
No 90
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=96.46 E-value=0.0037 Score=52.38 Aligned_cols=47 Identities=23% Similarity=0.324 Sum_probs=41.6
Q ss_pred hHHHhCCcEEEeCceeEEEEEcCC-eEEEEeCCCcEEEcCEEEEcCCCC
Q psy3952 3 EEFCELGGEIRLNQQVESFKENPE-SVTISTKQGDHLESSYALVCAGLQ 50 (252)
Q Consensus 3 ~~a~~~G~~i~~~~~V~~i~~~~~-~~~V~t~~g~~i~A~~VV~AaG~w 50 (252)
+.+++.|++++.+++|++++..++ .|.|.+.+| ++.+|+||+|+|.+
T Consensus 75 ~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g-~~~~d~vVlAtG~~ 122 (332)
T 3lzw_A 75 EQMAKFDQTICLEQAVESVEKQADGVFKLVTNEE-THYSKTVIITAGNG 122 (332)
T ss_dssp HHHTTSCCEEECSCCEEEEEECTTSCEEEEESSE-EEEEEEEEECCTTS
T ss_pred HHHHHhCCcEEccCEEEEEEECCCCcEEEEECCC-EEEeCEEEECCCCC
Confidence 456678999999999999998876 799999999 79999999999994
No 91
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=96.46 E-value=0.0048 Score=56.84 Aligned_cols=52 Identities=10% Similarity=0.037 Sum_probs=40.3
Q ss_pred hhHHHhCCcEEEeCceeEEEEEc-CCeE-EEE---eCCCc--EEEcCEEEEcCCCChHH
Q psy3952 2 GEEFCELGGEIRLNQQVESFKEN-PESV-TIS---TKQGD--HLESSYALVCAGLQADE 53 (252)
Q Consensus 2 ~~~a~~~G~~i~~~~~V~~i~~~-~~~~-~V~---t~~g~--~i~A~~VV~AaG~ws~~ 53 (252)
.+.+++.|++|+++++|+++..+ ++++ .|. +.+|. .+.|+.||+|+|.|+..
T Consensus 150 ~~~~~~~gv~i~~~~~v~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~~~~ 208 (588)
T 2wdq_A 150 YQQNLKNHTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGAGRI 208 (588)
T ss_dssp HHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEEECCCCCGGG
T ss_pred HHHHHhCCCEEEeCcEEEEEEECCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCCCccc
Confidence 45677889999999999999985 5543 233 24563 58999999999999853
No 92
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=96.43 E-value=0.0052 Score=52.49 Aligned_cols=49 Identities=22% Similarity=0.347 Sum_probs=42.2
Q ss_pred hHHHhCCcEEEeCceeEEEEEcCC-eEEEEeCCCcEEEcCEEEEcCCCCh
Q psy3952 3 EEFCELGGEIRLNQQVESFKENPE-SVTISTKQGDHLESSYALVCAGLQA 51 (252)
Q Consensus 3 ~~a~~~G~~i~~~~~V~~i~~~~~-~~~V~t~~g~~i~A~~VV~AaG~ws 51 (252)
+.+++.|++++.+++|++++..++ .|.|.+.+|.++.+|+||+|+|..+
T Consensus 82 ~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~li~AtG~~~ 131 (360)
T 3ab1_A 82 AQAERYNPDVVLNETVTKYTKLDDGTFETRTNTGNVYRSRAVLIAAGLGA 131 (360)
T ss_dssp HHHHTTCCEEECSCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCTTCS
T ss_pred HHHHHhCCEEEcCCEEEEEEECCCceEEEEECCCcEEEeeEEEEccCCCc
Confidence 456678999999999999998765 6889998887899999999999854
No 93
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=96.43 E-value=0.0032 Score=57.49 Aligned_cols=49 Identities=24% Similarity=0.352 Sum_probs=41.9
Q ss_pred HHHhCCc--EEEeCceeEEEEEcCC--eEEEEeCCCcEEEcCEEEEcCCCChH
Q psy3952 4 EFCELGG--EIRLNQQVESFKENPE--SVTISTKQGDHLESSYALVCAGLQAD 52 (252)
Q Consensus 4 ~a~~~G~--~i~~~~~V~~i~~~~~--~~~V~t~~g~~i~A~~VV~AaG~ws~ 52 (252)
.+++.|+ .++.+++|++++.+++ .|+|++.+|.++.||+||+|+|.++.
T Consensus 108 ~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G~~i~ad~lV~AtG~~s~ 160 (549)
T 4ap3_A 108 VADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRGDEVSARFLVVAAGPLSN 160 (549)
T ss_dssp HHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSEEE
T ss_pred HHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCCCEEEeCEEEECcCCCCC
Confidence 4677787 8999999999987654 79999999977999999999998763
No 94
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=96.42 E-value=0.0026 Score=56.19 Aligned_cols=46 Identities=20% Similarity=0.228 Sum_probs=40.0
Q ss_pred HHhCCcEEEeCceeEEEEEcCCe-EEEEeCCCcEEEcCEEEEcCCCCh
Q psy3952 5 FCELGGEIRLNQQVESFKENPES-VTISTKQGDHLESSYALVCAGLQA 51 (252)
Q Consensus 5 a~~~G~~i~~~~~V~~i~~~~~~-~~V~t~~g~~i~A~~VV~AaG~ws 51 (252)
+++.|++|+++++|++|+.++++ |.|+|+.+ ++.||+||+|++++.
T Consensus 222 ~~~lg~~i~~~~~V~~i~~~~~~~v~v~~~~~-~~~ad~VI~a~p~~~ 268 (453)
T 2yg5_A 222 AEALGDDVFLNAPVRTVKWNESGATVLADGDI-RVEASRVILAVPPNL 268 (453)
T ss_dssp HHHHGGGEECSCCEEEEEEETTEEEEEETTTE-EEEEEEEEECSCGGG
T ss_pred HHhcCCcEEcCCceEEEEEeCCceEEEEECCe-EEEcCEEEEcCCHHH
Confidence 45568999999999999998888 99988544 899999999999974
No 95
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=96.41 E-value=0.0031 Score=56.17 Aligned_cols=57 Identities=14% Similarity=0.217 Sum_probs=46.3
Q ss_pred hHHHhCCcEEEeCceeEEEEEcCCe-EEEE-eCCCcEEEcCEEEEcCCCChHHH---HHHcCC
Q psy3952 3 EEFCELGGEIRLNQQVESFKENPES-VTIS-TKQGDHLESSYALVCAGLQADEM---ALKSGC 60 (252)
Q Consensus 3 ~~a~~~G~~i~~~~~V~~i~~~~~~-~~V~-t~~g~~i~A~~VV~AaG~ws~~l---~~~~g~ 60 (252)
+.+++.|++++++++|++++.++++ +.|. +++| ++.||.||+|+|.+.+.. ++.+|+
T Consensus 219 ~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~g-~i~aD~Vv~a~G~~p~~~~l~l~~~g~ 280 (463)
T 4dna_A 219 AAMEEKGIRILCEDIIQSVSADADGRRVATTMKHG-EIVADQVMLALGRMPNTNGLGLEAAGV 280 (463)
T ss_dssp HHHHHTTCEEECSCCEEEEEECTTSCEEEEESSSC-EEEESEEEECSCEEESCTTSSTGGGTC
T ss_pred HHHHHCCCEEECCCEEEEEEEcCCCEEEEEEcCCC-eEEeCEEEEeeCcccCCCCCCccccCc
Confidence 4577899999999999999987655 6788 9999 599999999999986543 344554
No 96
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=96.38 E-value=0.0026 Score=55.66 Aligned_cols=46 Identities=17% Similarity=0.136 Sum_probs=40.3
Q ss_pred HHhCCcEEEeCceeEEEEEcCCeEEEEeCCCcEEEcCEEEEcCCCCh
Q psy3952 5 FCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQA 51 (252)
Q Consensus 5 a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g~~i~A~~VV~AaG~ws 51 (252)
+++.+.+++++++|++|+.++++|.|+|++| ++.||+||+|++++.
T Consensus 213 ~~~l~~~v~~~~~V~~i~~~~~~v~v~~~~g-~~~ad~Vv~a~~~~~ 258 (424)
T 2b9w_A 213 NATLEHPAERNVDITRITREDGKVHIHTTDW-DRESDVLVLTVPLEK 258 (424)
T ss_dssp HHHSSSCCBCSCCEEEEECCTTCEEEEESSC-EEEESEEEECSCHHH
T ss_pred HHhhcceEEcCCEEEEEEEECCEEEEEECCC-eEEcCEEEECCCHHH
Confidence 4455778899999999998888899999999 799999999999974
No 97
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=96.37 E-value=0.0053 Score=54.42 Aligned_cols=49 Identities=8% Similarity=0.210 Sum_probs=43.0
Q ss_pred hHHHhCCcEEEeCceeEEEEEcCCeEEEEeCCCcEEEcCEEEEcCCCChH
Q psy3952 3 EEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQAD 52 (252)
Q Consensus 3 ~~a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g~~i~A~~VV~AaG~ws~ 52 (252)
+.+++.|++++++++|++++..++++.|.+++| ++.||.||+|+|...+
T Consensus 197 ~~l~~~GV~i~~~~~v~~i~~~~~~v~v~~~~g-~i~aD~Vv~A~G~~p~ 245 (452)
T 3oc4_A 197 KSLEKQAVIFHFEETVLGIEETANGIVLETSEQ-EISCDSGIFALNLHPQ 245 (452)
T ss_dssp HHHHTTTEEEEETCCEEEEEECSSCEEEEESSC-EEEESEEEECSCCBCC
T ss_pred HHHHHcCCEEEeCCEEEEEEccCCeEEEEECCC-EEEeCEEEECcCCCCC
Confidence 456788999999999999998777788888888 9999999999998653
No 98
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=96.35 E-value=0.0051 Score=57.43 Aligned_cols=51 Identities=16% Similarity=0.158 Sum_probs=40.0
Q ss_pred hhHHHhCCcEEEeCceeEEEEEcCCeEE-E--E-eCCCc--EEEcCEEEEcCCCChH
Q psy3952 2 GEEFCELGGEIRLNQQVESFKENPESVT-I--S-TKQGD--HLESSYALVCAGLQAD 52 (252)
Q Consensus 2 ~~~a~~~G~~i~~~~~V~~i~~~~~~~~-V--~-t~~g~--~i~A~~VV~AaG~ws~ 52 (252)
.+.+++.|++|+++++|+++..+++++. | . +.+|. .+.|+.||+|+|.|+.
T Consensus 165 ~~~a~~~gv~i~~~~~v~~L~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~ 221 (660)
T 2bs2_A 165 ANECLKLGVSIQDRKEAIALIHQDGKCYGAVVRDLVTGDIIAYVAKGTLIATGGYGR 221 (660)
T ss_dssp HHHHHHHTCEEECSEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECCCCCGG
T ss_pred HHHHHhCCCEEEECcEEEEEEecCCEEEEEEEEECCCCcEEEEEcCEEEEccCcchh
Confidence 4567788999999999999987766532 3 2 35663 3999999999999984
No 99
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=96.31 E-value=0.0059 Score=56.62 Aligned_cols=51 Identities=4% Similarity=0.002 Sum_probs=40.1
Q ss_pred hhHHHhCCcEEEeCceeEEEEEcCCeEE-EE--e-CCCc--EEEcCEEEEcCCCChH
Q psy3952 2 GEEFCELGGEIRLNQQVESFKENPESVT-IS--T-KQGD--HLESSYALVCAGLQAD 52 (252)
Q Consensus 2 ~~~a~~~G~~i~~~~~V~~i~~~~~~~~-V~--t-~~g~--~i~A~~VV~AaG~ws~ 52 (252)
.+.+++.|++|+++++|+++..+++++. |. + .+|. .+.|+.||+|+|.|+.
T Consensus 162 ~~~~~~~gv~i~~~~~v~~Li~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~ 218 (621)
T 2h88_A 162 YGRSLRYDTSYFVEYFALDLLMENGECRGVIALCIEDGTIHRFRAKNTVIATGGYGR 218 (621)
T ss_dssp HHHHTTSCCEEEETEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCCCCGG
T ss_pred HHHHHhCCCEEEEceEEEEEEEECCEEEEEEEEEcCCCcEEEEEcCeEEECCCcccc
Confidence 4556788999999999999988776542 33 2 4563 5899999999999985
No 100
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=96.29 E-value=0.0029 Score=53.34 Aligned_cols=48 Identities=13% Similarity=0.159 Sum_probs=40.7
Q ss_pred hHHHhCCcEEEeCceeEEEEEcCCeEEEEeCCCcEEEcCEEEEcCCCChH
Q psy3952 3 EEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQAD 52 (252)
Q Consensus 3 ~~a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g~~i~A~~VV~AaG~ws~ 52 (252)
+.+++.|++++.++ |++++.+++.|+|.+ +|.++.+|+||+|+|.++.
T Consensus 78 ~~~~~~gv~~~~~~-v~~i~~~~~~~~v~~-~~~~~~~~~vv~A~G~~~~ 125 (333)
T 1vdc_A 78 KQSERFGTTIFTET-VTKVDFSSKPFKLFT-DSKAILADAVILAIGAVAK 125 (333)
T ss_dssp HHHHHTTCEEECCC-CCEEECSSSSEEEEC-SSEEEEEEEEEECCCEEEC
T ss_pred HHHHHCCCEEEEeE-EEEEEEcCCEEEEEE-CCcEEEcCEEEECCCCCcC
Confidence 45678899999986 999998888888888 5558999999999999863
No 101
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=96.28 E-value=0.0045 Score=51.57 Aligned_cols=49 Identities=16% Similarity=0.129 Sum_probs=41.1
Q ss_pred hHHHhCCcEEEeCceeEEEEEcC---CeEEEEeCCCcEEEcCEEEEcCCCCh
Q psy3952 3 EEFCELGGEIRLNQQVESFKENP---ESVTISTKQGDHLESSYALVCAGLQA 51 (252)
Q Consensus 3 ~~a~~~G~~i~~~~~V~~i~~~~---~~~~V~t~~g~~i~A~~VV~AaG~ws 51 (252)
+.+++.|++++.+++|+.++.+. +.|.|.+.+|.++.+|+||+|+|.+.
T Consensus 64 ~~~~~~~v~~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~ 115 (310)
T 1fl2_A 64 VHVDEYDVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAKW 115 (310)
T ss_dssp HHHHTSCEEEECSCCEEEEECCSSTTCCEEEEETTSCEEEEEEEEECCCEEE
T ss_pred HHHHHcCCeEEccCEEEEEEecccCCceEEEEECCCCEEEeCEEEECcCCCc
Confidence 44667899999999999997653 36889988886899999999999875
No 102
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=96.24 E-value=0.0018 Score=57.57 Aligned_cols=47 Identities=15% Similarity=0.205 Sum_probs=38.2
Q ss_pred HHhCCcEEEeCceeEEEEEcCCeEEEEe---CCCcEEEcCEEEEcCCCCh
Q psy3952 5 FCELGGEIRLNQQVESFKENPESVTIST---KQGDHLESSYALVCAGLQA 51 (252)
Q Consensus 5 a~~~G~~i~~~~~V~~i~~~~~~~~V~t---~~g~~i~A~~VV~AaG~ws 51 (252)
++..|++|+++++|++|+.++++|.|++ .+|.++.||+||+|++++.
T Consensus 245 ~~~lg~~i~~~~~V~~i~~~~~~~~v~~~~~~~g~~~~ad~vV~a~~~~~ 294 (478)
T 2ivd_A 245 AASLGDAAHVGARVEGLAREDGGWRLIIEEHGRRAELSVAQVVLAAPAHA 294 (478)
T ss_dssp HHHHGGGEESSEEEEEEECC--CCEEEEEETTEEEEEECSEEEECSCHHH
T ss_pred HHHhhhhEEcCCEEEEEEecCCeEEEEEeecCCCceEEcCEEEECCCHHH
Confidence 3445889999999999998888888887 5665799999999999985
No 103
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=96.19 E-value=0.0045 Score=56.46 Aligned_cols=54 Identities=9% Similarity=0.172 Sum_probs=41.5
Q ss_pred hCCcEEEeCceeEEEEEcC-CeE-EEEe-CC--C--cEEEcC-EEEEcCCC-ChHHHHHHcCC
Q psy3952 7 ELGGEIRLNQQVESFKENP-ESV-TIST-KQ--G--DHLESS-YALVCAGL-QADEMALKSGC 60 (252)
Q Consensus 7 ~~G~~i~~~~~V~~i~~~~-~~~-~V~t-~~--g--~~i~A~-~VV~AaG~-ws~~l~~~~g~ 60 (252)
+.|++|++++.|++|..++ +++ .|+. .+ | .++.|+ .||+|||+ |+..|+...|+
T Consensus 221 ~~~~~i~~~~~V~~i~~~~~~~~~GV~~~~~~~g~~~~i~A~k~VIlaaG~~~sp~lL~~SGi 283 (546)
T 2jbv_A 221 QENFTLLTGLRARQLVFDADRRCTGVDIVDSAFGHTHRLTARNEVVLSTGAIDTPKLLMLSGI 283 (546)
T ss_dssp CTTEEEECSCEEEEEEECTTSBEEEEEEESSTTSCEEEEEEEEEEEECSHHHHHHHHHHHTTE
T ss_pred CCCcEEEeCCEEEEEEECCCCeEEEEEEEECCCCcEEEEEeCccEEEecCccCCchhhhhcCC
Confidence 5799999999999999876 554 3543 22 4 368998 99999999 58888776553
No 104
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=96.19 E-value=0.0093 Score=54.29 Aligned_cols=58 Identities=16% Similarity=0.380 Sum_probs=47.3
Q ss_pred hHHHhCCcEEEeCceeEEEEE-------------------cCCeEEEEeCCCcEEEcCEEEEcCCCChH-HHHHHcCC
Q psy3952 3 EEFCELGGEIRLNQQVESFKE-------------------NPESVTISTKQGDHLESSYALVCAGLQAD-EMALKSGC 60 (252)
Q Consensus 3 ~~a~~~G~~i~~~~~V~~i~~-------------------~~~~~~V~t~~g~~i~A~~VV~AaG~ws~-~l~~~~g~ 60 (252)
+.+++.|++++++++|++++. .++++.+.+.+|.++.||.||+|+|...+ .+++.+|+
T Consensus 200 ~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~l~~~~g~ 277 (565)
T 3ntd_A 200 QAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSNGELLETDLLIMAIGVRPETQLARDAGL 277 (565)
T ss_dssp HHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEEEEETTSCEEEESEEEECSCEEECCHHHHHHTC
T ss_pred HHHHHCCCEEEeCCeEEEEeccccccccccccccccccccCCCcEEEEEcCCCEEEcCEEEECcCCccchHHHHhCCc
Confidence 456789999999999999987 45667777777768999999999999865 56666665
No 105
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=96.18 E-value=0.0057 Score=56.79 Aligned_cols=48 Identities=17% Similarity=0.116 Sum_probs=39.3
Q ss_pred hHHHh-CCcEEEeCceeEEEEEcCCeE-EEEeCCCcEEEcCEEEEcCCCCh
Q psy3952 3 EEFCE-LGGEIRLNQQVESFKENPESV-TISTKQGDHLESSYALVCAGLQA 51 (252)
Q Consensus 3 ~~a~~-~G~~i~~~~~V~~i~~~~~~~-~V~t~~g~~i~A~~VV~AaG~ws 51 (252)
+.+++ .|++++ +++|+++..+++++ .|.|.+|..+.|+.||+|+|.|+
T Consensus 132 e~Le~~~GV~I~-~~~V~~L~~e~g~V~GV~t~dG~~I~Ad~VVLATGt~s 181 (651)
T 3ces_A 132 TALENQPNLMIF-QQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFL 181 (651)
T ss_dssp HHHHTCTTEEEE-ECCEEEEEESSSBEEEEEETTSEEEEEEEEEECCSTTT
T ss_pred HHHHhCCCCEEE-EEEEEEEEecCCEEEEEEECCCCEEECCEEEEcCCCCc
Confidence 34555 699995 57999999887765 58888886799999999999985
No 106
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=96.17 E-value=0.0074 Score=55.88 Aligned_cols=48 Identities=15% Similarity=0.115 Sum_probs=39.3
Q ss_pred hHHHh-CCcEEEeCceeEEEEEcCCeE-EEEeCCCcEEEcCEEEEcCCCCh
Q psy3952 3 EEFCE-LGGEIRLNQQVESFKENPESV-TISTKQGDHLESSYALVCAGLQA 51 (252)
Q Consensus 3 ~~a~~-~G~~i~~~~~V~~i~~~~~~~-~V~t~~g~~i~A~~VV~AaG~ws 51 (252)
+.+++ .|++++ +++|+++..+++++ .|.|.+|..+.|+.||+|+|.|+
T Consensus 131 ~~Le~~~GVeI~-~~~Vt~L~~e~g~V~GV~t~dG~~i~AdaVVLATG~~s 180 (637)
T 2zxi_A 131 KVCENQENLYIK-QEEVVDIIVKNNQVVGVRTNLGVEYKTKAVVVTTGTFL 180 (637)
T ss_dssp HHHHTCTTEEEE-ESCEEEEEESSSBEEEEEETTSCEEECSEEEECCTTCB
T ss_pred HHHHhCCCCEEE-EeEEEEEEecCCEEEEEEECCCcEEEeCEEEEccCCCc
Confidence 34555 599995 57999999888775 48888887899999999999873
No 107
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=96.11 E-value=0.0039 Score=56.18 Aligned_cols=51 Identities=14% Similarity=0.023 Sum_probs=40.8
Q ss_pred hhHHHhCCcEEEeCceeEEEEEc---CCeEEEEe--C-CC--cEEEcCEEEEcCCCChH
Q psy3952 2 GEEFCELGGEIRLNQQVESFKEN---PESVTIST--K-QG--DHLESSYALVCAGLQAD 52 (252)
Q Consensus 2 ~~~a~~~G~~i~~~~~V~~i~~~---~~~~~V~t--~-~g--~~i~A~~VV~AaG~ws~ 52 (252)
.+.+++.|++++++++|++++.+ ++.|.|.+ . +| .++.||.||.|+|.++.
T Consensus 173 ~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S~ 231 (497)
T 2bry_A 173 LKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKFV 231 (497)
T ss_dssp HHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTTCC
T ss_pred HHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCcc
Confidence 35567789999999999999874 34577765 4 55 46999999999999984
No 108
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=96.10 E-value=0.0099 Score=52.93 Aligned_cols=58 Identities=16% Similarity=0.234 Sum_probs=47.5
Q ss_pred hHHHhCCcEEEeCceeEEEEEcCCeEEEEeCCCc-EEEcCEEEEcCCCChHH--H-HHHcCC
Q psy3952 3 EEFCELGGEIRLNQQVESFKENPESVTISTKQGD-HLESSYALVCAGLQADE--M-ALKSGC 60 (252)
Q Consensus 3 ~~a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g~-~i~A~~VV~AaG~ws~~--l-~~~~g~ 60 (252)
+.+++.|++++++++|++++.+++++.|++.+|. ++.+|.||+|+|...+. | ++.+|+
T Consensus 215 ~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~~~l~~~~~g~ 276 (463)
T 2r9z_A 215 ENMHAQGIETHLEFAVAALERDAQGTTLVAQDGTRLEGFDSVIWAVGRAPNTRDLGLEAAGI 276 (463)
T ss_dssp HHHHHTTCEEESSCCEEEEEEETTEEEEEETTCCEEEEESEEEECSCEEESCTTSCHHHHTC
T ss_pred HHHHHCCCEEEeCCEEEEEEEeCCeEEEEEeCCcEEEEcCEEEECCCCCcCCCCCCchhcCC
Confidence 4567889999999999999987767888888896 69999999999988654 3 445554
No 109
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=96.09 E-value=0.0051 Score=54.88 Aligned_cols=50 Identities=22% Similarity=0.359 Sum_probs=39.8
Q ss_pred HHHhCCcE--EEeCceeEEEEEcCC--eEEEEeCC---C--cEEEcCEEEEcCCCChHH
Q psy3952 4 EFCELGGE--IRLNQQVESFKENPE--SVTISTKQ---G--DHLESSYALVCAGLQADE 53 (252)
Q Consensus 4 ~a~~~G~~--i~~~~~V~~i~~~~~--~~~V~t~~---g--~~i~A~~VV~AaG~ws~~ 53 (252)
.+++.|++ ++.+++|++++..++ +|+|++.+ | .++.+|+||+|+|.|+..
T Consensus 110 ~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~~~~~~~d~VVvAtG~~s~p 168 (464)
T 2xve_A 110 RVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDTIYSEEFDYVVCCTGHFSTP 168 (464)
T ss_dssp HHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECCCSSSSB
T ss_pred HHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCceEEEEcCEEEECCCCCCCC
Confidence 45667888 899999999998765 78887643 3 479999999999987643
No 110
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=96.09 E-value=0.0072 Score=54.98 Aligned_cols=49 Identities=16% Similarity=0.301 Sum_probs=40.4
Q ss_pred HHhCC--cEEEeCceeEEEEEcC--CeEEEEeCCCcEEEcCEEEEcCCCChHH
Q psy3952 5 FCELG--GEIRLNQQVESFKENP--ESVTISTKQGDHLESSYALVCAGLQADE 53 (252)
Q Consensus 5 a~~~G--~~i~~~~~V~~i~~~~--~~~~V~t~~g~~i~A~~VV~AaG~ws~~ 53 (252)
+++.+ ..++++++|++++.++ +.|+|++.+|.+++||+||+|+|.++..
T Consensus 104 ~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~vV~AtG~~s~p 156 (542)
T 1w4x_A 104 ADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHGDRIRARYLIMASGQLSVP 156 (542)
T ss_dssp HHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSCCCC
T ss_pred HHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCCCEEEeCEEEECcCCCCCC
Confidence 44544 6789999999998754 4799999888789999999999998743
No 111
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=96.09 E-value=0.0047 Score=55.73 Aligned_cols=57 Identities=18% Similarity=0.311 Sum_probs=42.7
Q ss_pred hHHHhCC-cEEEeCceeEEEEEcC-C-eE-EEEe--CCC-----cEEEcCEEEEcCCCC-hHHHHHHcC
Q psy3952 3 EEFCELG-GEIRLNQQVESFKENP-E-SV-TIST--KQG-----DHLESSYALVCAGLQ-ADEMALKSG 59 (252)
Q Consensus 3 ~~a~~~G-~~i~~~~~V~~i~~~~-~-~~-~V~t--~~g-----~~i~A~~VV~AaG~w-s~~l~~~~g 59 (252)
+.|+++| ++|++++.|++|..++ + ++ .|+. .+| .++.|+.||+|||++ +..|+...|
T Consensus 229 ~~a~~~~n~~i~~~~~V~~i~~~~~g~~~~gV~~~~~~g~~~~~~~v~A~~VIlaaG~~~s~~lL~~Sg 297 (504)
T 1n4w_A 229 AAALGTGKVTIQTLHQVKTIRQTKDGGYALTVEQKDTDGKLLATKEISCRYLFLGAGSLGSTELLVRAR 297 (504)
T ss_dssp HHHHHTTSEEEEESEEEEEEEECTTSSEEEEEEEECTTCCEEEEEEEEEEEEEECSHHHHHHHHHHHHH
T ss_pred HHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCccceeEEEeeCEEEEccCCCCCHHHHHhcc
Confidence 4566675 9999999999999875 3 33 3544 344 368999999999998 677766655
No 112
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=96.06 E-value=0.0088 Score=55.23 Aligned_cols=52 Identities=8% Similarity=-0.020 Sum_probs=40.7
Q ss_pred hhHHHhCC-cEEEeCceeEEEEEcCCeE---EEE-eCCCc--EEEcCEEEEcCCCChHH
Q psy3952 2 GEEFCELG-GEIRLNQQVESFKENPESV---TIS-TKQGD--HLESSYALVCAGLQADE 53 (252)
Q Consensus 2 ~~~a~~~G-~~i~~~~~V~~i~~~~~~~---~V~-t~~g~--~i~A~~VV~AaG~ws~~ 53 (252)
.+.+++.| ++++++++|+++..+++++ .+. +.+|. .+.|+.||+|+|.|+..
T Consensus 141 ~~~~~~~gnv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~s~~ 199 (602)
T 1kf6_A 141 FQTSLQFPQIQRFDEHFVLDILVDDGHVRGLVAMNMMEGTLVQIRANAVVMATGGAGRV 199 (602)
T ss_dssp HHHHTTCTTEEEEETEEEEEEEEETTEEEEEEEEETTTTEEEEEECSCEEECCCCCGGG
T ss_pred HHHHHhCCCcEEEeCCEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCCccc
Confidence 35567788 9999999999999877753 222 35673 59999999999999864
No 113
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=96.06 E-value=0.0085 Score=55.57 Aligned_cols=49 Identities=10% Similarity=0.179 Sum_probs=39.8
Q ss_pred hHHHh-CCcEEEeCceeEEEEEcCCeEE-EEeCCCcEEEcCEEEEcCCCChH
Q psy3952 3 EEFCE-LGGEIRLNQQVESFKENPESVT-ISTKQGDHLESSYALVCAGLQAD 52 (252)
Q Consensus 3 ~~a~~-~G~~i~~~~~V~~i~~~~~~~~-V~t~~g~~i~A~~VV~AaG~ws~ 52 (252)
+.+++ .|++++. .+|+++..+++++. |.|.+|..+.|+.||+|+|.|+.
T Consensus 125 ~~l~~~~GV~I~~-~~V~~L~~d~g~V~GV~t~~G~~i~Ad~VVLATG~~s~ 175 (641)
T 3cp8_A 125 RIVEHEPNIDLLQ-DTVIGVSANSGKFSSVTVRSGRAIQAKAAILACGTFLN 175 (641)
T ss_dssp HHHHTCTTEEEEE-CCEEEEEEETTEEEEEEETTSCEEEEEEEEECCTTCBT
T ss_pred HHHHhCCCCEEEe-eEEEEEEecCCEEEEEEECCCcEEEeCEEEECcCCCCC
Confidence 34555 4999975 58999988888775 88888878999999999999854
No 114
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=96.05 E-value=0.0035 Score=56.07 Aligned_cols=50 Identities=12% Similarity=-0.045 Sum_probs=39.5
Q ss_pred hhHHHhCCcEEEeCceeEEEEEcCCeE---EEEeCCCcEEEcCEEEEcCCCChHH
Q psy3952 2 GEEFCELGGEIRLNQQVESFKENPESV---TISTKQGDHLESSYALVCAGLQADE 53 (252)
Q Consensus 2 ~~~a~~~G~~i~~~~~V~~i~~~~~~~---~V~t~~g~~i~A~~VV~AaG~ws~~ 53 (252)
.+.+++.|++++++++| ++..+++++ .+.+.+| ++.|+.||+|+|.++..
T Consensus 126 ~~~~~~~gv~i~~~~~v-~l~~~~~~v~Gv~v~~~~g-~~~a~~VVlAtGg~~~~ 178 (472)
T 2e5v_A 126 LKLAREEGIPIIEDRLV-EIRVKDGKVTGFVTEKRGL-VEDVDKLVLATGGYSYL 178 (472)
T ss_dssp HHHHHHTTCCEECCCEE-EEEEETTEEEEEEETTTEE-ECCCSEEEECCCCCGGG
T ss_pred HHHHHhCCCEEEECcEE-EEEEeCCEEEEEEEEeCCC-eEEeeeEEECCCCCccc
Confidence 35567789999999999 998777764 2334556 78899999999999853
No 115
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=96.03 E-value=0.005 Score=55.59 Aligned_cols=57 Identities=14% Similarity=0.176 Sum_probs=42.5
Q ss_pred hHHHhCC-cEEEeCceeEEEEEcC-C-eE-EEEe--CCC-----cEEEcCEEEEcCCCC-hHHHHHHcC
Q psy3952 3 EEFCELG-GEIRLNQQVESFKENP-E-SV-TIST--KQG-----DHLESSYALVCAGLQ-ADEMALKSG 59 (252)
Q Consensus 3 ~~a~~~G-~~i~~~~~V~~i~~~~-~-~~-~V~t--~~g-----~~i~A~~VV~AaG~w-s~~l~~~~g 59 (252)
..|++.| ++|+++++|++|..++ + ++ .|+. .+| .++.|+.||+|||++ +..|+...|
T Consensus 234 ~~a~~~~n~~i~~~~~v~~i~~~~~g~~~~gV~~~~~~g~~~~~~~~~A~~VIlaaGa~~sp~lL~~Sg 302 (507)
T 1coy_A 234 AQAAATGKLTITTLHRVTKVAPATGSGYSVTMEQIDEQGNVVATKVVTADRVFFAAGSVGTSKLLVSMK 302 (507)
T ss_dssp HHHHHTTCEEEECSEEEEEEEECSSSSEEEEEEEECTTSCEEEEEEEEEEEEEECSHHHHHHHHHHHHH
T ss_pred HHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCcccccEEEEeCEEEEccCccCCHHHHHhcc
Confidence 4456664 9999999999999876 3 33 3543 244 368999999999998 777776655
No 116
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=95.99 E-value=0.01 Score=52.60 Aligned_cols=58 Identities=14% Similarity=0.221 Sum_probs=46.5
Q ss_pred hHHHhCCcEEEeCceeEEEEEcCCe-EEEEeCCCcEEEcCEEEEcCCCChHH--H-HHHcCC
Q psy3952 3 EEFCELGGEIRLNQQVESFKENPES-VTISTKQGDHLESSYALVCAGLQADE--M-ALKSGC 60 (252)
Q Consensus 3 ~~a~~~G~~i~~~~~V~~i~~~~~~-~~V~t~~g~~i~A~~VV~AaG~ws~~--l-~~~~g~ 60 (252)
+.+++.|++++++++|++++.++++ +.|.+.+|.++.||.||+|+|...+. | ++.+|+
T Consensus 216 ~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~i~~D~vv~a~G~~p~~~~l~~~~~gl 277 (450)
T 1ges_A 216 EVMNAEGPQLHTNAIPKAVVKNTDGSLTLELEDGRSETVDCLIWAIGREPANDNINLEAAGV 277 (450)
T ss_dssp HHHHHHSCEEECSCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEESCTTSCHHHHTC
T ss_pred HHHHHCCCEEEeCCEEEEEEEeCCcEEEEEECCCcEEEcCEEEECCCCCcCCCCCCchhcCc
Confidence 4567889999999999999986544 77888888679999999999987653 3 455564
No 117
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=95.98 E-value=0.0078 Score=54.75 Aligned_cols=58 Identities=16% Similarity=0.233 Sum_probs=42.9
Q ss_pred hHHHh-CCcEEEeCceeEEEEEcCCeEE-EEeCC---Cc--EE---EcCEEEEcCCCC-hHHHHHHcCC
Q psy3952 3 EEFCE-LGGEIRLNQQVESFKENPESVT-ISTKQ---GD--HL---ESSYALVCAGLQ-ADEMALKSGC 60 (252)
Q Consensus 3 ~~a~~-~G~~i~~~~~V~~i~~~~~~~~-V~t~~---g~--~i---~A~~VV~AaG~w-s~~l~~~~g~ 60 (252)
+.+++ .|++|++++.|++|..+++++. |+..+ |. ++ .++.||+|||+| +..|+...|+
T Consensus 203 ~~~~~~~~~~i~~~~~V~~i~~~~~~~~gV~~~~~~~g~~~~~~v~~~~~VIlaaG~~~sp~lL~~sGi 271 (546)
T 1kdg_A 203 QTALARPNFTFKTNVMVSNVVRNGSQILGVQTNDPTLGPNGFIPVTPKGRVILSAGAFGTSRILFQSGI 271 (546)
T ss_dssp HHHHTCTTEEEECSCCEEEEEEETTEEEEEEESCTTSSGGGEEEEEEEEEEEECSHHHHHHHHHHHTTB
T ss_pred HHHhhCCCcEEEeCCEEEEEEEeCCEEEEEEEEecCCCceeEEEEEeCCEEEEcCChhcCHHHHHHcCC
Confidence 34444 5999999999999998776643 65432 52 34 889999999997 5677776665
No 118
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=95.95 E-value=0.013 Score=52.59 Aligned_cols=58 Identities=17% Similarity=0.247 Sum_probs=46.0
Q ss_pred hHHHhCCcEEEeCceeEEEEEcCC-eEEEEeCCCcEEEcCEEEEcCCCChHH--H-HHHcCC
Q psy3952 3 EEFCELGGEIRLNQQVESFKENPE-SVTISTKQGDHLESSYALVCAGLQADE--M-ALKSGC 60 (252)
Q Consensus 3 ~~a~~~G~~i~~~~~V~~i~~~~~-~~~V~t~~g~~i~A~~VV~AaG~ws~~--l-~~~~g~ 60 (252)
+.+++.|++++++++|++++.+++ .+.|++.+|.++.||.||+|+|...+. | ++.+|+
T Consensus 243 ~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~~~L~l~~~gl 304 (495)
T 2wpf_A 243 KQLTANGIEIMTNENPAKVSLNTDGSKHVTFESGKTLDVDVVMMAIGRIPRTNDLQLGNVGV 304 (495)
T ss_dssp HHHHHTTCEEEESCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEECCGGGTGGGTTC
T ss_pred HHHHhCCCEEEeCCEEEEEEEcCCceEEEEECCCcEEEcCEEEECCCCcccccccchhhcCc
Confidence 456789999999999999998754 477888888689999999999987653 3 344554
No 119
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=95.92 E-value=0.014 Score=53.07 Aligned_cols=52 Identities=4% Similarity=-0.047 Sum_probs=39.6
Q ss_pred ChhHHHh-CCcEEEeCceeEEEEE-cCC------eE-EEEe---CCCc--EEEcCEEEEcCCCChH
Q psy3952 1 MGEEFCE-LGGEIRLNQQVESFKE-NPE------SV-TIST---KQGD--HLESSYALVCAGLQAD 52 (252)
Q Consensus 1 l~~~a~~-~G~~i~~~~~V~~i~~-~~~------~~-~V~t---~~g~--~i~A~~VV~AaG~ws~ 52 (252)
|.+.+++ .|++|+++++|+++.. +++ ++ .|.+ .+|. .+.|+.||+|+|.|+.
T Consensus 144 L~~~~~~~~gv~i~~~~~v~~L~~~~~g~~~~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~ 209 (540)
T 1chu_A 144 LVSKALNHPNIRVLERTNAVDLIVSDKIGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATGGASK 209 (540)
T ss_dssp CHHHHHHCTTEEEECSEEEEEEEEGGGTTCCSSCBEEEEEEEETTTTEEEEEECSEEEECCCCCGG
T ss_pred HHHHHHcCCCCEEEeCcEEEEEEEcCCCCcccCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCccc
Confidence 3566777 6999999999999998 434 43 2433 2563 6899999999999985
No 120
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=95.91 E-value=0.0063 Score=55.48 Aligned_cols=50 Identities=8% Similarity=0.117 Sum_probs=41.1
Q ss_pred HHHhCCc--EEEeCceeEEEEEcC--CeEEEEeCCCcEEEcCEEEEcCCCChHH
Q psy3952 4 EFCELGG--EIRLNQQVESFKENP--ESVTISTKQGDHLESSYALVCAGLQADE 53 (252)
Q Consensus 4 ~a~~~G~--~i~~~~~V~~i~~~~--~~~~V~t~~g~~i~A~~VV~AaG~ws~~ 53 (252)
.+++.|+ .++.+++|++++.++ +.|.|++.+|.++.||+||+|+|.++..
T Consensus 96 ~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~lV~AtG~~s~p 149 (545)
T 3uox_A 96 AADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNEEVVTCRFLISATGPLSAS 149 (545)
T ss_dssp HHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTTEEEEEEEEEECCCSCBC-
T ss_pred HHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCCCEEEeCEEEECcCCCCCC
Confidence 3566676 788999999998754 4799999998779999999999988643
No 121
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=95.90 E-value=0.014 Score=51.11 Aligned_cols=54 Identities=17% Similarity=0.313 Sum_probs=44.6
Q ss_pred hHHHhCCcEEEeCceeEEEEEcCCeEEEEeCCCcEEEcCEEEEcCCCChH-HHHHHcCC
Q psy3952 3 EEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQAD-EMALKSGC 60 (252)
Q Consensus 3 ~~a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g~~i~A~~VV~AaG~ws~-~l~~~~g~ 60 (252)
+.+++.|++++++++|++++ + + .|.+.+|.++.||.||+|+|...+ .+++.+|+
T Consensus 195 ~~l~~~GV~i~~~~~v~~i~-~-~--~v~~~~g~~i~~D~vi~a~G~~p~~~l~~~~gl 249 (408)
T 2gqw_A 195 RYHAAQGVDLRFERSVTGSV-D-G--VVLLDDGTRIAADMVVVGIGVLANDALARAAGL 249 (408)
T ss_dssp HHHHHTTCEEEESCCEEEEE-T-T--EEEETTSCEEECSEEEECSCEEECCHHHHHHTC
T ss_pred HHHHHcCcEEEeCCEEEEEE-C-C--EEEECCCCEEEcCEEEECcCCCccHHHHHhCCC
Confidence 45678899999999999998 3 3 566777768999999999998865 57777776
No 122
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=95.85 E-value=0.0067 Score=52.91 Aligned_cols=56 Identities=18% Similarity=0.254 Sum_probs=42.2
Q ss_pred hHHHh-CC-cEEEeCceeEEEEEcCCeEEEEeCC---C--cEEEcCEEEEcCCCChHHHHHHcCC
Q psy3952 3 EEFCE-LG-GEIRLNQQVESFKENPESVTISTKQ---G--DHLESSYALVCAGLQADEMALKSGC 60 (252)
Q Consensus 3 ~~a~~-~G-~~i~~~~~V~~i~~~~~~~~V~t~~---g--~~i~A~~VV~AaG~ws~~l~~~~g~ 60 (252)
+.+++ .| ++++.+++|++++. +++|+|.+.+ | .++.||.||.|.|.+|. +.+.++.
T Consensus 115 ~~~~~~~g~~~v~~~~~v~~i~~-~~~v~v~~~~~~~g~~~~~~ad~vV~AdG~~S~-vR~~l~~ 177 (410)
T 3c96_A 115 AAVRERLGQQAVRTGLGVERIEE-RDGRVLIGARDGHGKPQALGADVLVGADGIHSA-VRAHLHP 177 (410)
T ss_dssp HHHHHHHCTTSEEESEEEEEEEE-ETTEEEEEEEETTSCEEEEEESEEEECCCTTCH-HHHHHCT
T ss_pred HHHHhhCCCcEEEECCEEEEEec-CCccEEEEecCCCCCceEEecCEEEECCCccch-hHHHhcC
Confidence 44554 36 48999999999998 6677776543 5 47999999999999985 4555543
No 123
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=95.84 E-value=0.012 Score=48.39 Aligned_cols=47 Identities=9% Similarity=0.044 Sum_probs=39.2
Q ss_pred HHHhC-CcEEEeCceeEEEEEcCCeEEEEeCCCcEEEcCEEEEcCCCCh
Q psy3952 4 EFCEL-GGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQA 51 (252)
Q Consensus 4 ~a~~~-G~~i~~~~~V~~i~~~~~~~~V~t~~g~~i~A~~VV~AaG~ws 51 (252)
.+++. +++++. ++|++++.+++.|.|.+.+|.++.+|+||+|+|.+.
T Consensus 65 ~~~~~~~v~~~~-~~v~~i~~~~~~~~v~~~~g~~~~~d~vviAtG~~~ 112 (297)
T 3fbs_A 65 QIERYPTIHWVE-GRVTDAKGSFGEFIVEIDGGRRETAGRLILAMGVTD 112 (297)
T ss_dssp HHTTCTTEEEEE-SCEEEEEEETTEEEEEETTSCEEEEEEEEECCCCEE
T ss_pred HHHhcCCeEEEE-eEEEEEEEcCCeEEEEECCCCEEEcCEEEECCCCCC
Confidence 44555 777765 599999998888999998886799999999999964
No 124
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=95.79 E-value=0.01 Score=49.67 Aligned_cols=48 Identities=15% Similarity=0.230 Sum_probs=40.3
Q ss_pred hHHHhCCcEEEeCceeEEEEEcCCeEEEEeCCCcEEEcCEEEEcCCCChH
Q psy3952 3 EEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQAD 52 (252)
Q Consensus 3 ~~a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g~~i~A~~VV~AaG~ws~ 52 (252)
+.+++.|++++. ++|++++.+++.|.|.++.+ ++.+|+||+|+|.+..
T Consensus 80 ~~~~~~~v~~~~-~~v~~i~~~~~~~~v~~~~~-~~~~~~li~AtG~~~~ 127 (319)
T 3cty_A 80 DHAANYAKIREG-VEVRSIKKTQGGFDIETNDD-TYHAKYVIITTGTTHK 127 (319)
T ss_dssp HHHHTTSEEEET-CCEEEEEEETTEEEEEESSS-EEEEEEEEECCCEEEC
T ss_pred HHHHHcCCEEEE-eeEEEEEEeCCEEEEEECCC-EEEeCEEEECCCCCcc
Confidence 456778999987 79999998888888888655 8999999999998753
No 125
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=95.73 E-value=0.01 Score=53.96 Aligned_cols=58 Identities=16% Similarity=0.159 Sum_probs=42.0
Q ss_pred hHHHhCCcEEEeCceeEEEEEcCC---eE-EEEe--CCCc--EE---EcCEEEEcCCCC-hHHHHHHcCC
Q psy3952 3 EEFCELGGEIRLNQQVESFKENPE---SV-TIST--KQGD--HL---ESSYALVCAGLQ-ADEMALKSGC 60 (252)
Q Consensus 3 ~~a~~~G~~i~~~~~V~~i~~~~~---~~-~V~t--~~g~--~i---~A~~VV~AaG~w-s~~l~~~~g~ 60 (252)
..+++.|++|++++.|++|..+++ ++ .|+. .+|. ++ .++.||+|||++ +..|+...|+
T Consensus 202 ~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~GV~~~~~~g~~~~~~v~a~k~VILaaGa~~sp~lL~~SGi 271 (536)
T 1ju2_A 202 NKGNSNNLRVGVHASVEKIIFSNAPGLTATGVIYRDSNGTPHQAFVRSKGEVIVSAGTIGTPQLLLLSGV 271 (536)
T ss_dssp GGSCTTTEEEEESCEEEEEEECCSSSCBEEEEEEECTTSCEEEEEEEEEEEEEECCHHHHHHHHHHHTTE
T ss_pred hhhcCCCcEEEeCCEEEEEEECCCCCCEEEEEEEEeCCCceEEEEeccCCEEEEcCcccCCHHHHHHcCC
Confidence 445678999999999999998763 43 3543 3453 34 578999999997 6777666554
No 126
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=95.70 E-value=0.014 Score=55.50 Aligned_cols=45 Identities=22% Similarity=0.316 Sum_probs=39.9
Q ss_pred HhCCcEEEeCceeEEEEEcCCeEEEEeCCCcEEEcCEEEEcCCCC
Q psy3952 6 CELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQ 50 (252)
Q Consensus 6 ~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g~~i~A~~VV~AaG~w 50 (252)
...|++|+++++|++|+.++++|+|+|.+|.++.||+||+|+.+.
T Consensus 540 La~gl~I~l~t~V~~I~~~~~~v~V~~~~G~~i~Ad~VIvA~P~~ 584 (776)
T 4gut_A 540 LAEGLDIQLKSPVQCIDYSGDEVQVTTTDGTGYSAQKVLVTVPLA 584 (776)
T ss_dssp HHTTSCEESSCCEEEEECSSSSEEEEETTCCEEEESEEEECCCHH
T ss_pred HHhCCcEEcCCeeEEEEEcCCEEEEEECCCcEEEcCEEEECCCHH
Confidence 345899999999999999888899999888679999999999764
No 127
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=95.69 E-value=0.012 Score=52.58 Aligned_cols=57 Identities=23% Similarity=0.332 Sum_probs=44.3
Q ss_pred hHHHhCCcEEEeCceeEEEEEcCCeEEEEeCCCcEEEcCEEEEcCCCChH-HHHHHcCC
Q psy3952 3 EEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQAD-EMALKSGC 60 (252)
Q Consensus 3 ~~a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g~~i~A~~VV~AaG~ws~-~l~~~~g~ 60 (252)
+.+++.|++++++++|++++.+++.+.|.++++ ++.||.||+|+|...+ .+++.+|+
T Consensus 235 ~~l~~~Gv~i~~~~~v~~i~~~~~v~~v~~~~~-~i~~D~vi~a~G~~p~~~~l~~~g~ 292 (480)
T 3cgb_A 235 KEADKHHIEILTNENVKAFKGNERVEAVETDKG-TYKADLVLVSVGVKPNTDFLEGTNI 292 (480)
T ss_dssp HHHHHTTCEEECSCCEEEEEESSBEEEEEETTE-EEECSEEEECSCEEESCGGGTTSCC
T ss_pred HHHHHcCcEEEcCCEEEEEEcCCcEEEEEECCC-EEEcCEEEECcCCCcChHHHHhCCc
Confidence 457789999999999999987643345777766 8999999999999864 35554554
No 128
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=95.64 E-value=0.011 Score=53.41 Aligned_cols=50 Identities=12% Similarity=0.141 Sum_probs=41.8
Q ss_pred hHHHhCCcEEEeCceeEEEEEc---CCeEEEEeCCCcEEEcCEEEEcCCCChH
Q psy3952 3 EEFCELGGEIRLNQQVESFKEN---PESVTISTKQGDHLESSYALVCAGLQAD 52 (252)
Q Consensus 3 ~~a~~~G~~i~~~~~V~~i~~~---~~~~~V~t~~g~~i~A~~VV~AaG~ws~ 52 (252)
+.+++.|++++.+++|+.+..+ ++.|.|++.+|.++.+|+||+|+|.+..
T Consensus 275 ~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~~~~ 327 (521)
T 1hyu_A 275 AHVSDYDVDVIDSQSASKLVPAATEGGLHQIETASGAVLKARSIIIATGAKWR 327 (521)
T ss_dssp HHHHTSCEEEECSCCEEEEECCSSTTSCEEEEETTSCEEEEEEEEECCCEEEC
T ss_pred HHHHHcCCEEEcCCEEEEEEeccCCCceEEEEECCCCEEEcCEEEECCCCCcC
Confidence 4567889999999999999754 3368899888878999999999998753
No 129
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=95.63 E-value=0.016 Score=51.76 Aligned_cols=58 Identities=12% Similarity=0.186 Sum_probs=44.8
Q ss_pred hHHHhCCcEEEeCceeEEEEEcCCe--EEEEeCCC-cEEEcCEEEEcCCCChHH-H-HHHcCC
Q psy3952 3 EEFCELGGEIRLNQQVESFKENPES--VTISTKQG-DHLESSYALVCAGLQADE-M-ALKSGC 60 (252)
Q Consensus 3 ~~a~~~G~~i~~~~~V~~i~~~~~~--~~V~t~~g-~~i~A~~VV~AaG~ws~~-l-~~~~g~ 60 (252)
+.+++.|++++++++|++++.++++ +.|.+.+| .++.||.||+|+|...+. | ++.+|+
T Consensus 234 ~~l~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~~l~l~~~gl 296 (479)
T 2hqm_A 234 DHYVKEGINVHKLSKIVKVEKNVETDKLKIHMNDSKSIDDVDELIWTIGRKSHLGMGSENVGI 296 (479)
T ss_dssp HHHHHHTCEEECSCCEEEEEECC-CCCEEEEETTSCEEEEESEEEECSCEEECCCSSGGGGTC
T ss_pred HHHHhCCeEEEeCCEEEEEEEcCCCcEEEEEECCCcEEEEcCEEEECCCCCCccccChhhcCc
Confidence 4567889999999999999876554 67888777 689999999999976543 4 344554
No 130
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=95.60 E-value=0.012 Score=49.31 Aligned_cols=48 Identities=6% Similarity=0.234 Sum_probs=39.3
Q ss_pred hHHHhCCcEEEeCceeEEEEEc--CCe-EEEEeCCCcEEEcCEEEEcCCCCh
Q psy3952 3 EEFCELGGEIRLNQQVESFKEN--PES-VTISTKQGDHLESSYALVCAGLQA 51 (252)
Q Consensus 3 ~~a~~~G~~i~~~~~V~~i~~~--~~~-~~V~t~~g~~i~A~~VV~AaG~ws 51 (252)
+.+++.|++++. ++|++++.+ ++. |.|.+.+|.++.+|+||+|+|.+.
T Consensus 73 ~~~~~~gv~~~~-~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~ 123 (325)
T 2q7v_A 73 QQAEKFGAKVEM-DEVQGVQHDATSHPYPFTVRGYNGEYRAKAVILATGADP 123 (325)
T ss_dssp HHHHHTTCEEEE-CCEEEEEECTTSSSCCEEEEESSCEEEEEEEEECCCEEE
T ss_pred HHHHHcCCEEEe-eeEEEEEeccCCCceEEEEECCCCEEEeCEEEECcCCCc
Confidence 456788999987 689999887 544 777776776899999999999875
No 131
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=95.52 E-value=0.0091 Score=53.25 Aligned_cols=47 Identities=23% Similarity=0.360 Sum_probs=39.1
Q ss_pred HHhCC-cEEEeCceeEEEEEcCCeEEEEeCCC---cEEEcCEEEEcCCCCh
Q psy3952 5 FCELG-GEIRLNQQVESFKENPESVTISTKQG---DHLESSYALVCAGLQA 51 (252)
Q Consensus 5 a~~~G-~~i~~~~~V~~i~~~~~~~~V~t~~g---~~i~A~~VV~AaG~ws 51 (252)
+++.+ ++|+.+++|++|+.++++|.|++.+| .+++||+||+|+.++.
T Consensus 246 ~~~l~~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~~~~ad~vI~a~p~~~ 296 (489)
T 2jae_A 246 QDRIGTDNIVFGAEVTSMKNVSEGVTVEYTAGGSKKSITADYAICTIPPHL 296 (489)
T ss_dssp HHHHCGGGEETTCEEEEEEEETTEEEEEEEETTEEEEEEESEEEECSCHHH
T ss_pred HHhcCCCeEEECCEEEEEEEcCCeEEEEEecCCeEEEEECCEEEECCCHHH
Confidence 33445 78999999999999999999887665 5799999999998763
No 132
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=95.43 E-value=0.02 Score=53.25 Aligned_cols=50 Identities=10% Similarity=0.079 Sum_probs=38.9
Q ss_pred hHHHhC-Cc-EEEeCceeEEEEEcCC---eEE-EE---eCCCc--EEEcCEEEEcCCCChH
Q psy3952 3 EEFCEL-GG-EIRLNQQVESFKENPE---SVT-IS---TKQGD--HLESSYALVCAGLQAD 52 (252)
Q Consensus 3 ~~a~~~-G~-~i~~~~~V~~i~~~~~---~~~-V~---t~~g~--~i~A~~VV~AaG~ws~ 52 (252)
+.+++. |+ +|+++++|+++..+++ ++. |. +.+|. .|.|+.||+|+|.|+.
T Consensus 159 ~~~~~~~gv~~i~~~~~v~~L~~~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG~~~ 219 (643)
T 1jnr_A 159 EAAKMAVGEENIYERVFIFELLKDNNDPNAVAGAVGFSVREPKFYVFKAKAVILATGGATL 219 (643)
T ss_dssp HHHHHHHCGGGEECSEEEEEEEECTTCTTBEEEEEEEESSSSCEEEEECSEEEECCCCBCS
T ss_pred HHHHhcCCCcEEEecCEEEEEEEcCCccceeEEEEEEEecCCcEEEEEcCEEEECCCcccc
Confidence 456676 99 9999999999998766 543 33 24452 5899999999999985
No 133
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=95.38 E-value=0.025 Score=50.23 Aligned_cols=50 Identities=12% Similarity=0.292 Sum_probs=41.4
Q ss_pred hHHHhCCcEEEeCceeEEEEEcCCeEEEEeC-C--Cc--EEEcCEEEEcCCCChH
Q psy3952 3 EEFCELGGEIRLNQQVESFKENPESVTISTK-Q--GD--HLESSYALVCAGLQAD 52 (252)
Q Consensus 3 ~~a~~~G~~i~~~~~V~~i~~~~~~~~V~t~-~--g~--~i~A~~VV~AaG~ws~ 52 (252)
+.+++.|++++.+++|++++.+++++.|++. + |. ++.+|.||+|+|...+
T Consensus 218 ~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vv~a~G~~p~ 272 (464)
T 2eq6_A 218 RALEKEGIRVRTKTKAVGYEKKKDGLHVRLEPAEGGEGEEVVVDKVLVAVGRKPR 272 (464)
T ss_dssp HHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTCCSCEEEEESEEEECSCEEES
T ss_pred HHHHhcCCEEEcCCEEEEEEEeCCEEEEEEeecCCCceeEEEcCEEEECCCcccC
Confidence 4567889999999999999987777776654 4 65 7999999999998764
No 134
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=95.32 E-value=0.033 Score=49.22 Aligned_cols=49 Identities=20% Similarity=0.523 Sum_probs=40.2
Q ss_pred hHHHhCCcEEEeCceeEEEEEcCCeEE-EEeCCCcEEEcCEEEEcCCCChH
Q psy3952 3 EEFCELGGEIRLNQQVESFKENPESVT-ISTKQGDHLESSYALVCAGLQAD 52 (252)
Q Consensus 3 ~~a~~~G~~i~~~~~V~~i~~~~~~~~-V~t~~g~~i~A~~VV~AaG~ws~ 52 (252)
+.+++.|++++++++|++++.+++++. |.+ +|.++.||.||+|+|...+
T Consensus 199 ~~l~~~Gv~i~~~~~v~~i~~~~~~v~~v~~-~g~~i~~D~vv~a~G~~p~ 248 (452)
T 2cdu_A 199 KDYEAHGVNLVLGSKVAAFEEVDDEIITKTL-DGKEIKSDIAILCIGFRPN 248 (452)
T ss_dssp HHHHHTTCEEEESSCEEEEEEETTEEEEEET-TSCEEEESEEEECCCEEEC
T ss_pred HHHHHCCCEEEcCCeeEEEEcCCCeEEEEEe-CCCEEECCEEEECcCCCCC
Confidence 456789999999999999987666665 666 5558999999999998754
No 135
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=95.27 E-value=0.025 Score=50.25 Aligned_cols=58 Identities=16% Similarity=0.106 Sum_probs=43.5
Q ss_pred hHH-HhCCcEEEeCceeEEEEEcCCeEEEEeC--CC--cEEEcCEEEEcCCCChHH-H--HHHcCC
Q psy3952 3 EEF-CELGGEIRLNQQVESFKENPESVTISTK--QG--DHLESSYALVCAGLQADE-M--ALKSGC 60 (252)
Q Consensus 3 ~~a-~~~G~~i~~~~~V~~i~~~~~~~~V~t~--~g--~~i~A~~VV~AaG~ws~~-l--~~~~g~ 60 (252)
+.+ ++.|++++++++|++++.+++++.|.+. +| .++.||.||+|+|...+. + ++.+|+
T Consensus 223 ~~l~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~i~~D~vv~a~G~~p~~~~l~l~~~gl 288 (468)
T 2qae_A 223 GALAKNEKMKFMTSTKVVGGTNNGDSVSLEVEGKNGKRETVTCEALLVSVGRRPFTGGLGLDKINV 288 (468)
T ss_dssp HHHHHHTCCEEECSCEEEEEEECSSSEEEEEECC---EEEEEESEEEECSCEEECCTTSCHHHHTC
T ss_pred HHHhhcCCcEEEeCCEEEEEEEcCCeEEEEEEcCCCceEEEECCEEEECCCcccCCCCCCchhcCC
Confidence 446 7889999999999999987766666543 44 479999999999988653 2 455554
No 136
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=95.26 E-value=0.03 Score=50.26 Aligned_cols=51 Identities=16% Similarity=0.208 Sum_probs=42.4
Q ss_pred hHHHhCCcEEEeCceeEEEEEcCC-eEEEEeCCCcE-EEcCEEEEcCCCChHH
Q psy3952 3 EEFCELGGEIRLNQQVESFKENPE-SVTISTKQGDH-LESSYALVCAGLQADE 53 (252)
Q Consensus 3 ~~a~~~G~~i~~~~~V~~i~~~~~-~~~V~t~~g~~-i~A~~VV~AaG~ws~~ 53 (252)
+.++++|++++++++|++++.+++ .+.|.+.+|.+ +.||.||+|+|.-.+.
T Consensus 225 ~~l~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~D~vi~a~G~~p~~ 277 (500)
T 1onf_A 225 NDMKKNNINIVTFADVVEIKKVSDKNLSIHLSDGRIYEHFDHVIYCVGRSPDT 277 (500)
T ss_dssp HHHHHTTCEEECSCCEEEEEESSTTCEEEEETTSCEEEEESEEEECCCBCCTT
T ss_pred HHHHhCCCEEEECCEEEEEEEcCCceEEEEECCCcEEEECCEEEECCCCCcCC
Confidence 456789999999999999987653 47788878866 9999999999987653
No 137
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=95.26 E-value=0.019 Score=48.07 Aligned_cols=48 Identities=17% Similarity=0.284 Sum_probs=40.6
Q ss_pred hHHHhCCcEEEeCceeEEEEEcCCeEEEEe---CCCcEEEcCEEEEcCCCCh
Q psy3952 3 EEFCELGGEIRLNQQVESFKENPESVTIST---KQGDHLESSYALVCAGLQA 51 (252)
Q Consensus 3 ~~a~~~G~~i~~~~~V~~i~~~~~~~~V~t---~~g~~i~A~~VV~AaG~ws 51 (252)
+.+++.|++++.++ |++++.+++.|.+.+ +++..+.+|+||+|+|.+.
T Consensus 92 ~~~~~~gv~i~~~~-v~~i~~~~~~~~v~~~~~~~~~~~~~d~vvlAtG~~~ 142 (338)
T 3itj_A 92 EQSTKFGTEIITET-VSKVDLSSKPFKLWTEFNEDAEPVTTDAIILATGASA 142 (338)
T ss_dssp HHHHHTTCEEECSC-EEEEECSSSSEEEEETTCSSSCCEEEEEEEECCCEEE
T ss_pred HHHHHcCCEEEEeE-EEEEEEcCCEEEEEEEecCCCcEEEeCEEEECcCCCc
Confidence 45778899999988 999998888898877 3555799999999999864
No 138
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=95.25 E-value=0.029 Score=49.94 Aligned_cols=58 Identities=17% Similarity=0.275 Sum_probs=44.6
Q ss_pred hHHHhCCcEEEeCceeEEEEEcCCe-EEEE-----eCCCcEEEcCEEEEcCCCChHH-H--HHHcCC
Q psy3952 3 EEFCELGGEIRLNQQVESFKENPES-VTIS-----TKQGDHLESSYALVCAGLQADE-M--ALKSGC 60 (252)
Q Consensus 3 ~~a~~~G~~i~~~~~V~~i~~~~~~-~~V~-----t~~g~~i~A~~VV~AaG~ws~~-l--~~~~g~ 60 (252)
+.+++.|++++++++|++++.++++ +.|+ +.++.++.||.||+|+|...+. + ++.+|+
T Consensus 228 ~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~i~~D~vv~a~G~~p~~~~l~l~~~g~ 294 (474)
T 1zmd_A 228 RILQKQGFKFKLNTKVTGATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGRRPFTKNLGLEELGI 294 (474)
T ss_dssp HHHHHTTCEEECSEEEEEEEECTTSCEEEEEEETTSCCCEEEEESEEEECSCEEECCTTSSHHHHTC
T ss_pred HHHHHCCCEEEeCceEEEEEEcCCceEEEEEEecCCCCceEEEcCEEEECcCCCcCCCcCCchhcCC
Confidence 4567899999999999999987765 6665 3555579999999999987643 2 445554
No 139
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=95.23 E-value=0.036 Score=48.09 Aligned_cols=46 Identities=11% Similarity=0.197 Sum_probs=38.6
Q ss_pred hHHHhCCcEEEeCceeEEEEEcCCeEEEEeCCCcEEEcCEEEEcCCCC
Q psy3952 3 EEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQ 50 (252)
Q Consensus 3 ~~a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g~~i~A~~VV~AaG~w 50 (252)
+.++++|++++.+++|++|+.++. +|++.+|.++.+|++|+|+|..
T Consensus 70 ~~~~~~~i~~~~~~~V~~id~~~~--~v~~~~g~~~~yd~lvlAtG~~ 115 (385)
T 3klj_A 70 DWYEKNNIKVITSEFATSIDPNNK--LVTLKSGEKIKYEKLIIASGSI 115 (385)
T ss_dssp HHHHHTTCEEECSCCEEEEETTTT--EEEETTSCEEECSEEEECCCEE
T ss_pred HHHHHCCCEEEeCCEEEEEECCCC--EEEECCCCEEECCEEEEecCCC
Confidence 346688999999999999987765 4667777789999999999973
No 140
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=95.19 E-value=0.017 Score=51.16 Aligned_cols=46 Identities=11% Similarity=0.108 Sum_probs=37.2
Q ss_pred HHHhCCcEEEeCceeEEEEEc---CCeE--EEEeCCCc----EEEcCEEEEcCCC
Q psy3952 4 EFCELGGEIRLNQQVESFKEN---PESV--TISTKQGD----HLESSYALVCAGL 49 (252)
Q Consensus 4 ~a~~~G~~i~~~~~V~~i~~~---~~~~--~V~t~~g~----~i~A~~VV~AaG~ 49 (252)
.+++.|++++++++|++++.. ++.| .|.+.+|. ++.+|+||+|+|.
T Consensus 136 ~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~d~lVlAtG~ 190 (463)
T 3s5w_A 136 VASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTTRALVVSPGG 190 (463)
T ss_dssp HHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEESEEEECCCC
T ss_pred HHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEeCEEEECCCC
Confidence 355678999999999999876 4444 67776664 7999999999997
No 141
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=95.19 E-value=0.029 Score=52.06 Aligned_cols=49 Identities=12% Similarity=0.179 Sum_probs=39.6
Q ss_pred ChhHHHhCCcEEEeCceeEEEEEcC--CeEE-EEeCCCcEEEcCEEEEcCCC
Q psy3952 1 MGEEFCELGGEIRLNQQVESFKENP--ESVT-ISTKQGDHLESSYALVCAGL 49 (252)
Q Consensus 1 l~~~a~~~G~~i~~~~~V~~i~~~~--~~~~-V~t~~g~~i~A~~VV~AaG~ 49 (252)
|++.++.+|++++++++|.+|..++ ++++ |.+.+|.++.|++||..+..
T Consensus 384 L~r~~~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~~Ge~i~A~~VVs~~~~ 435 (650)
T 1vg0_A 384 FCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIEDSY 435 (650)
T ss_dssp HHHHHHHTTCEEESSCCEEEEEEETTTCCEEEEEETTSCEEECSEEEEEGGG
T ss_pred HHHHHHHcCCEEEeCCEeeEEEEeCCCCeEEEEEeCCCCEEEcCEEEEChhh
Confidence 3567889999999999999998876 6654 66677878999999885543
No 142
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=95.16 E-value=0.014 Score=52.51 Aligned_cols=43 Identities=16% Similarity=0.332 Sum_probs=37.4
Q ss_pred cEEEeCceeEEEEEc-CCeEEEEeCCCcEEEcCEEEEcCCCChH
Q psy3952 10 GEIRLNQQVESFKEN-PESVTISTKQGDHLESSYALVCAGLQAD 52 (252)
Q Consensus 10 ~~i~~~~~V~~i~~~-~~~~~V~t~~g~~i~A~~VV~AaG~ws~ 52 (252)
++|+++++|++|..+ ++++.|+|.+|.++.||+||+|++++.-
T Consensus 215 ~~i~~~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~p~~~l 258 (516)
T 1rsg_A 215 NWLKLSCEVKSITREPSKNVTVNCEDGTVYNADYVIITVPQSVL 258 (516)
T ss_dssp GGEETTCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCCHHHH
T ss_pred CEEEECCEEEEEEEcCCCeEEEEECCCcEEECCEEEECCCHHHh
Confidence 579999999999986 5679999988867999999999987653
No 143
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=95.14 E-value=0.019 Score=48.44 Aligned_cols=47 Identities=21% Similarity=0.352 Sum_probs=38.9
Q ss_pred hHHHhCCcEEEeCceeEEEEEcCCeEEE-EeCCCcEEEcCEEEEcCCCCh
Q psy3952 3 EEFCELGGEIRLNQQVESFKENPESVTI-STKQGDHLESSYALVCAGLQA 51 (252)
Q Consensus 3 ~~a~~~G~~i~~~~~V~~i~~~~~~~~V-~t~~g~~i~A~~VV~AaG~ws 51 (252)
+.+++.|++++.++ |++++. ++.|.| .+.+|.++.+|+||+|+|.+.
T Consensus 79 ~~~~~~~v~~~~~~-v~~i~~-~~~~~v~~~~~g~~~~~d~lviAtG~~~ 126 (335)
T 2a87_A 79 EQALRFGADLRMED-VESVSL-HGPLKSVVTADGQTHRARAVILAMGAAA 126 (335)
T ss_dssp HHHHHTTCEEECCC-EEEEEC-SSSSEEEEETTSCEEEEEEEEECCCEEE
T ss_pred HHHHHcCCEEEEee-EEEEEe-CCcEEEEEeCCCCEEEeCEEEECCCCCc
Confidence 34667899999887 999987 556888 787776899999999999865
No 144
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=94.95 E-value=0.027 Score=51.58 Aligned_cols=56 Identities=20% Similarity=0.376 Sum_probs=44.4
Q ss_pred hHHHhCCcEEEeCceeEEEEEcCCeEEEEeCCCcEEEcCEEEEcCCCChH-HHHHHcCC
Q psy3952 3 EEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQAD-EMALKSGC 60 (252)
Q Consensus 3 ~~a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g~~i~A~~VV~AaG~ws~-~l~~~~g~ 60 (252)
+.+++.|++++.+++|++++.++++ |.+.+|.++.||.||+|+|...+ .+++.+|+
T Consensus 236 ~~l~~~GV~i~~~~~v~~i~~~~~~--v~~~~g~~i~~D~Vi~a~G~~p~~~~l~~~g~ 292 (588)
T 3ics_A 236 EHMKNHDVELVFEDGVDALEENGAV--VRLKSGSVIQTDMLILAIGVQPESSLAKGAGL 292 (588)
T ss_dssp HHHHHTTCEEECSCCEEEEEGGGTE--EEETTSCEEECSEEEECSCEEECCHHHHHTTC
T ss_pred HHHHHcCCEEEECCeEEEEecCCCE--EEECCCCEEEcCEEEEccCCCCChHHHHhcCc
Confidence 4567899999999999999876554 55566668999999999999865 36666665
No 145
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=94.84 E-value=0.028 Score=50.22 Aligned_cols=58 Identities=17% Similarity=0.172 Sum_probs=44.7
Q ss_pred hHHHhCCcEEEeCceeEEEEEcCCeEEEEeCC----CcEEEcCEEEEcCCCChHH--H-HHHcCC
Q psy3952 3 EEFCELGGEIRLNQQVESFKENPESVTISTKQ----GDHLESSYALVCAGLQADE--M-ALKSGC 60 (252)
Q Consensus 3 ~~a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~----g~~i~A~~VV~AaG~ws~~--l-~~~~g~ 60 (252)
+.+++.|++++++++|++++.+++++.|.+.+ |.++.||.||+|+|...+. + ++.+|+
T Consensus 234 ~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~~~~D~vv~a~G~~p~~~~l~~~~~gl 298 (482)
T 1ojt_A 234 KQNEYRFDNIMVNTKTVAVEPKEDGVYVTFEGANAPKEPQRYDAVLVAAGRAPNGKLISAEKAGV 298 (482)
T ss_dssp HHHGGGEEEEECSCEEEEEEEETTEEEEEEESSSCCSSCEEESCEEECCCEEECGGGTTGGGTTC
T ss_pred HHHHhcCCEEEECCEEEEEEEcCCeEEEEEeccCCCceEEEcCEEEECcCCCcCCCCCChhhcCc
Confidence 45678899999999999999877776666544 6579999999999987643 2 455554
No 146
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=94.84 E-value=0.048 Score=45.17 Aligned_cols=57 Identities=18% Similarity=0.253 Sum_probs=42.9
Q ss_pred HHHh-CCcEEEeCceeEEEEEcCCeEEEEeC---CCc--EEEcCEEEEcCCCChH-HHHHHcCC
Q psy3952 4 EFCE-LGGEIRLNQQVESFKENPESVTISTK---QGD--HLESSYALVCAGLQAD-EMALKSGC 60 (252)
Q Consensus 4 ~a~~-~G~~i~~~~~V~~i~~~~~~~~V~t~---~g~--~i~A~~VV~AaG~ws~-~l~~~~g~ 60 (252)
.+.+ .|++++.+++|++++.+++...|.+. +|. ++.+|.||+|+|...+ .+++.+|+
T Consensus 198 ~~~~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~~~~~g~ 261 (323)
T 3f8d_A 198 TVKKKPNVEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKELNVNGVFIEIGFDPPTDFAKSNGI 261 (323)
T ss_dssp HHHTCTTEEEECSEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECCCEECCHHHHHHTTC
T ss_pred HHHhCCCcEEEeCCEEEEEeccCceeEEEEEECCCCceEEEEcCEEEEEECCCCChhHHhhcCe
Confidence 3444 49999999999999887554445443 253 6999999999999876 67777765
No 147
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=94.83 E-value=0.027 Score=46.91 Aligned_cols=47 Identities=11% Similarity=0.226 Sum_probs=38.6
Q ss_pred hHHHhCCcEEEeCceeEEEEEcCCeEEEEeCCCcEEEcCEEEEcCCCCh
Q psy3952 3 EEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQA 51 (252)
Q Consensus 3 ~~a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g~~i~A~~VV~AaG~ws 51 (252)
+.+++.|++++.++ |+.++.+++.|.| +.+|.++.+|+||+|+|.+.
T Consensus 70 ~~~~~~~~~~~~~~-v~~i~~~~~~~~v-~~~~~~~~~~~lv~AtG~~~ 116 (320)
T 1trb_A 70 EHATKFETEIIFDH-INKVDLQNRPFRL-NGDNGEYTCDALIIATGASA 116 (320)
T ss_dssp HHHHHTTCEEECCC-EEEEECSSSSEEE-EESSCEEEEEEEEECCCEEE
T ss_pred HHHHHCCCEEEEee-eeEEEecCCEEEE-EeCCCEEEcCEEEECCCCCc
Confidence 35677899999886 9999887778888 55555899999999999864
No 148
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=94.74 E-value=0.036 Score=49.06 Aligned_cols=50 Identities=20% Similarity=0.379 Sum_probs=40.3
Q ss_pred hHHHhCCcEEEeCceeEEEEEcCCeEEEEeC---CCcEEEcCEEEEcCCCChH
Q psy3952 3 EEFCELGGEIRLNQQVESFKENPESVTISTK---QGDHLESSYALVCAGLQAD 52 (252)
Q Consensus 3 ~~a~~~G~~i~~~~~V~~i~~~~~~~~V~t~---~g~~i~A~~VV~AaG~ws~ 52 (252)
+.+++.|++++.+++|++++.+++++.|++. ++.++.+|.||+|+|...+
T Consensus 219 ~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~ 271 (455)
T 1ebd_A 219 KRLKKKGVEVVTNALAKGAEEREDGVTVTYEANGETKTIDADYVLVTVGRRPN 271 (455)
T ss_dssp HHHHHTTCEEEESEEEEEEEEETTEEEEEEEETTEEEEEEESEEEECSCEEES
T ss_pred HHHHHCCCEEEeCCEEEEEEEeCCeEEEEEEeCCceeEEEcCEEEECcCCCcc
Confidence 4567889999999999999987777666542 3447999999999998764
No 149
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=94.68 E-value=0.049 Score=48.39 Aligned_cols=50 Identities=18% Similarity=0.197 Sum_probs=40.0
Q ss_pred hHHHhCCcEEEeCceeEEEEEcCCeEEEEeC--CC-cEEEcCEEEEcCCCChH
Q psy3952 3 EEFCELGGEIRLNQQVESFKENPESVTISTK--QG-DHLESSYALVCAGLQAD 52 (252)
Q Consensus 3 ~~a~~~G~~i~~~~~V~~i~~~~~~~~V~t~--~g-~~i~A~~VV~AaG~ws~ 52 (252)
+.+++.|++++.+++|++++.+++++.|... +| .++.+|.||+|+|.-.+
T Consensus 229 ~~l~~~Gv~v~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~D~vi~a~G~~p~ 281 (476)
T 3lad_A 229 KILTKQGLKILLGARVTGTEVKNKQVTVKFVDAEGEKSQAFDKLIVAVGRRPV 281 (476)
T ss_dssp HHHHHTTEEEEETCEEEEEEECSSCEEEEEESSSEEEEEEESEEEECSCEEEC
T ss_pred HHHHhCCCEEEECCEEEEEEEcCCEEEEEEEeCCCcEEEECCEEEEeeCCccc
Confidence 4567889999999999999988777665543 33 47999999999997643
No 150
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=94.61 E-value=0.042 Score=48.45 Aligned_cols=49 Identities=16% Similarity=0.291 Sum_probs=39.2
Q ss_pred hHHHhCCcEEEeCceeEEEEEcCCeEEEEeCCCcEEEcCEEEEcCCCChH
Q psy3952 3 EEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQAD 52 (252)
Q Consensus 3 ~~a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g~~i~A~~VV~AaG~ws~ 52 (252)
+.+++.|++++++++|++++.++..+.|.++.+ ++.||.||+|+|...+
T Consensus 199 ~~l~~~gv~i~~~~~v~~i~~~~~v~~v~~~~~-~i~~d~vi~a~G~~p~ 247 (447)
T 1nhp_A 199 EEMEANNITIATGETVERYEGDGRVQKVVTDKN-AYDADLVVVAVGVRPN 247 (447)
T ss_dssp HHHHTTTEEEEESCCEEEEECSSBCCEEEESSC-EEECSEEEECSCEEES
T ss_pred HHHHhCCCEEEcCCEEEEEEccCcEEEEEECCC-EEECCEEEECcCCCCC
Confidence 456788999999999999987633235777655 8999999999998764
No 151
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=94.57 E-value=0.042 Score=48.88 Aligned_cols=51 Identities=24% Similarity=0.289 Sum_probs=40.3
Q ss_pred hHHHhCCcEEEeCceeEEEEE--cCCeEEEEeC-----CCcEEEcCEEEEcCCCChHH
Q psy3952 3 EEFCELGGEIRLNQQVESFKE--NPESVTISTK-----QGDHLESSYALVCAGLQADE 53 (252)
Q Consensus 3 ~~a~~~G~~i~~~~~V~~i~~--~~~~~~V~t~-----~g~~i~A~~VV~AaG~ws~~ 53 (252)
+.+++.|++++++++|++++. +++.+.|.+. ++.++.+|.||+|+|...+.
T Consensus 232 ~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~ 289 (478)
T 1v59_A 232 KFLKKQGLDFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEVLLVAVGRRPYI 289 (478)
T ss_dssp HHHHHTTCEEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECSCEEECC
T ss_pred HHHHHCCCEEEeCCEEEEEEEecCCCeEEEEEEEcCCCCceEEECCEEEECCCCCcCC
Confidence 456788999999999999987 5666666543 34479999999999987653
No 152
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=94.53 E-value=0.073 Score=45.19 Aligned_cols=58 Identities=14% Similarity=0.183 Sum_probs=42.5
Q ss_pred hHHHhCCcEEEeCceeEEEEEcCCeE-EE--EeCCC--cEEEcCEEEEcCCCChH-HHHHHcCC
Q psy3952 3 EEFCELGGEIRLNQQVESFKENPESV-TI--STKQG--DHLESSYALVCAGLQAD-EMALKSGC 60 (252)
Q Consensus 3 ~~a~~~G~~i~~~~~V~~i~~~~~~~-~V--~t~~g--~~i~A~~VV~AaG~ws~-~l~~~~g~ 60 (252)
+..++.|++++.+++|++++.+++++ .| .+.+| ..+.+|.||+|+|...+ .+++.+|+
T Consensus 210 ~~~~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~ 273 (360)
T 3ab1_A 210 RARANGTIDVYLETEVASIEESNGVLTRVHLRSSDGSKWTVEADRLLILIGFKSNLGPLARWDL 273 (360)
T ss_dssp HHHHHTSEEEESSEEEEEEEEETTEEEEEEEEETTCCEEEEECSEEEECCCBCCSCGGGGGSSC
T ss_pred HHhhcCceEEEcCcCHHHhccCCCceEEEEEEecCCCeEEEeCCEEEECCCCCCCHHHHHhhcc
Confidence 44567899999999999999876653 33 33355 47999999999998764 35554543
No 153
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=94.52 E-value=0.05 Score=48.23 Aligned_cols=58 Identities=26% Similarity=0.382 Sum_probs=43.5
Q ss_pred hHHHhCCcEEEeCceeEEEEEcCCeEEEEeC-CC--cEEEcCEEEEcCCCChHH-H--HHHcCC
Q psy3952 3 EEFCELGGEIRLNQQVESFKENPESVTISTK-QG--DHLESSYALVCAGLQADE-M--ALKSGC 60 (252)
Q Consensus 3 ~~a~~~G~~i~~~~~V~~i~~~~~~~~V~t~-~g--~~i~A~~VV~AaG~ws~~-l--~~~~g~ 60 (252)
+.+++.|++++++++|++++.+++++.|... +| .++.+|.||+|+|...+. + ++.+|+
T Consensus 220 ~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~gl 283 (464)
T 2a8x_A 220 KQFKKLGVTILTATKVESIADGGSQVTVTVTKDGVAQELKAEKVLQAIGFAPNVEGYGLDKAGV 283 (464)
T ss_dssp HHHHHHTCEEECSCEEEEEEECSSCEEEEEESSSCEEEEEESEEEECSCEEECCSSSCHHHHTC
T ss_pred HHHHHcCCEEEeCcEEEEEEEcCCeEEEEEEcCCceEEEEcCEEEECCCCCccCCCCCchhcCC
Confidence 4567889999999999999987766666542 44 479999999999987543 2 344554
No 154
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=94.50 E-value=0.027 Score=48.82 Aligned_cols=57 Identities=14% Similarity=0.111 Sum_probs=49.1
Q ss_pred HHHhCCcEEEeCceeEEEEEcCCeEEEEeCCCcEEEcCEEEEcCCCChHHHHHHcCC
Q psy3952 4 EFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQADEMALKSGC 60 (252)
Q Consensus 4 ~a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g~~i~A~~VV~AaG~ws~~l~~~~g~ 60 (252)
..+++|++++.++++..++.+++...|.+.+|+++.+|.|+.|+|.-++.+++..|+
T Consensus 211 ~l~~~gi~v~~~~~v~~v~~~~~~~~v~~~~g~~i~~D~vi~~~g~~~~~~~~~~gl 267 (401)
T 3vrd_B 211 GTENALIEWHPGPDAAVVKTDTEAMTVETSFGETFKAAVINLIPPQRAGKIAQSASL 267 (401)
T ss_dssp TSTTCSEEEECTTTTCEEEEETTTTEEEETTSCEEECSEEEECCCEEECHHHHHTTC
T ss_pred HHHhcCcEEEeCceEEEEEecccceEEEcCCCcEEEeeEEEEecCcCCchhHhhccc
Confidence 345789999999999999988777778899998899999999999888888877775
No 155
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=94.43 E-value=0.039 Score=49.23 Aligned_cols=46 Identities=22% Similarity=0.428 Sum_probs=37.4
Q ss_pred HhCCcEEEeCceeEEEEEcCCeEEEEeCCCc----EEEcCEEEEcCCCCh
Q psy3952 6 CELGGEIRLNQQVESFKENPESVTISTKQGD----HLESSYALVCAGLQA 51 (252)
Q Consensus 6 ~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g~----~i~A~~VV~AaG~ws 51 (252)
+..+.+|+.+++|++|+.++++|.|++.+|. ++.||+||+|++++.
T Consensus 249 ~~l~~~i~~~~~V~~I~~~~~~v~v~~~~~~~~~~~~~ad~vI~t~p~~~ 298 (498)
T 2iid_A 249 RDIQDKVHFNAQVIKIQQNDQKVTVVYETLSKETPSVTADYVIVCTTSRA 298 (498)
T ss_dssp HHTGGGEESSCEEEEEEECSSCEEEEEECSSSCCCEEEESEEEECSCHHH
T ss_pred HhcccccccCCEEEEEEECCCeEEEEEecCCcccceEEeCEEEECCChHH
Confidence 3444589999999999998888988876652 489999999999863
No 156
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=94.36 E-value=0.074 Score=48.84 Aligned_cols=55 Identities=15% Similarity=0.119 Sum_probs=40.1
Q ss_pred HhCCcEEEeCceeEEEEEc----CCeEE-EEe--CCC--cEEEcC-EEEEcCCCC-hHHHHHHcCC
Q psy3952 6 CELGGEIRLNQQVESFKEN----PESVT-IST--KQG--DHLESS-YALVCAGLQ-ADEMALKSGC 60 (252)
Q Consensus 6 ~~~G~~i~~~~~V~~i~~~----~~~~~-V~t--~~g--~~i~A~-~VV~AaG~w-s~~l~~~~g~ 60 (252)
++.+.+|++++.|++|..+ +++++ |+. .+| .++.|+ -||+|||+. |.+|+...|+
T Consensus 238 ~r~NL~V~t~a~V~rIl~d~~~~~~ra~GV~~~~~~G~~~~v~A~kEVILsAGa~~SPqLL~lSGI 303 (583)
T 3qvp_A 238 QRPNLQVLTGQYVGKVLLSQNGTTPRAVGVEFGTHKGNTHNVYAKHEVLLAAGSAVSPTILEYSGI 303 (583)
T ss_dssp TCTTEEEECSCEEEEEEEECSSSSCEEEEEEEESSTTCEEEEEEEEEEEECSCTTTHHHHHHHTTB
T ss_pred cCCCcEEEcCCEEEEEEeccCCCCCEEEEEEEEecCCcEEEEEECCEEEEeCCccCCHHHHHHcCC
Confidence 4569999999999999887 45433 542 345 357887 599999887 6777766554
No 157
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=94.25 E-value=0.084 Score=43.83 Aligned_cols=50 Identities=12% Similarity=0.187 Sum_probs=37.4
Q ss_pred hHHHhCCcEEEeCceeEEEEEcCCeE-EEEeCC----C--cEEEcCEEEEcCCCChH
Q psy3952 3 EEFCELGGEIRLNQQVESFKENPESV-TISTKQ----G--DHLESSYALVCAGLQAD 52 (252)
Q Consensus 3 ~~a~~~G~~i~~~~~V~~i~~~~~~~-~V~t~~----g--~~i~A~~VV~AaG~ws~ 52 (252)
+.+++.|++++++++|++++.+++++ .|...+ | .++.||.||+|+|.-.+
T Consensus 192 ~~l~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~~p~ 248 (320)
T 1trb_A 192 DKVENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHSPN 248 (320)
T ss_dssp HHHHTSSEEEECSCEEEEEEECSSSEEEEEEECCTTCCCCEEEECSEEEECSCEEES
T ss_pred HhcccCCeEEEcCceeEEEEcCCCceEEEEEEeccCCCceEEEEcCEEEEEeCCCCC
Confidence 34567899999999999999876553 243321 3 47999999999997654
No 158
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=94.23 E-value=0.068 Score=47.14 Aligned_cols=45 Identities=11% Similarity=0.213 Sum_probs=37.9
Q ss_pred CCcEEEeCceeEEEEEcCCeEEEEeC---CCc--EEEcCEEEEcCCCChH
Q psy3952 8 LGGEIRLNQQVESFKENPESVTISTK---QGD--HLESSYALVCAGLQAD 52 (252)
Q Consensus 8 ~G~~i~~~~~V~~i~~~~~~~~V~t~---~g~--~i~A~~VV~AaG~ws~ 52 (252)
.|++++.+++|++++.++++|.|.+. +|. ++.||.||+|+|.-.+
T Consensus 329 ~~v~i~~~~~v~~v~~~~~~~~v~~~~~~~g~~~~~~~D~Vv~AtG~~p~ 378 (463)
T 3s5w_A 329 PRHAFRCMTTVERATATAQGIELALRDAGSGELSVETYDAVILATGYERQ 378 (463)
T ss_dssp CCSEEETTEEEEEEEEETTEEEEEEEETTTCCEEEEEESEEEECCCEECC
T ss_pred CCeEEEeCCEEEEEEecCCEEEEEEEEcCCCCeEEEECCEEEEeeCCCCC
Confidence 69999999999999988888877654 553 3999999999998755
No 159
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=94.15 E-value=0.036 Score=48.17 Aligned_cols=52 Identities=13% Similarity=0.294 Sum_probs=42.2
Q ss_pred hHHHhCCcEEEeCceeEEEEEcCCeEEEEeCCCcEEEcCEEEEcCCCChHHHHHHc
Q psy3952 3 EEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQADEMALKS 58 (252)
Q Consensus 3 ~~a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g~~i~A~~VV~AaG~ws~~l~~~~ 58 (252)
+.+++.|++++++++|++++.+ + |.+.+|.++.||.||+|+|...+.+...+
T Consensus 226 ~~l~~~gV~~~~~~~v~~i~~~--~--v~~~~g~~~~~D~vi~a~G~~~~~~l~~~ 277 (409)
T 3h8l_A 226 SIYNQLGIKLVHNFKIKEIREH--E--IVDEKGNTIPADITILLPPYTGNPALKNS 277 (409)
T ss_dssp HHHHHHTCEEECSCCEEEECSS--E--EEETTSCEEECSEEEEECCEECCHHHHTS
T ss_pred HHHHHCCCEEEcCCceEEECCC--e--EEECCCCEEeeeEEEECCCCCccHHHHhc
Confidence 4567889999999999998643 2 66667768999999999999887776655
No 160
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=94.10 E-value=0.098 Score=47.58 Aligned_cols=50 Identities=8% Similarity=-0.008 Sum_probs=43.6
Q ss_pred hhHHHhCCcEEEeCceeEEEEEcCCeEEEEeCCCcEEEcCEEEEcCCCCh
Q psy3952 2 GEEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQA 51 (252)
Q Consensus 2 ~~~a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g~~i~A~~VV~AaG~ws 51 (252)
.+..++.|+++++++.|++++..++.+.|.+.++..+.+|.|++|+|--.
T Consensus 270 ~~~l~~~gi~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~D~vLvAvGR~P 319 (542)
T 4b1b_A 270 KLYMEEQGVMFKNGILPKKLTKMDDKILVEFSDKTSELYDTVLYAIGRKG 319 (542)
T ss_dssp HHHHHHTTCEEEETCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEE
T ss_pred HHHHHhhcceeecceEEEEEEecCCeEEEEEcCCCeEEEEEEEEcccccC
Confidence 35678899999999999999999998888887776899999999999754
No 161
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=94.01 E-value=0.068 Score=47.74 Aligned_cols=50 Identities=14% Similarity=0.338 Sum_probs=39.9
Q ss_pred hHHHhCCcEEEeCceeEEEEEcCCeEEEEeC--C-C--cEEEcCEEEEcCCCChH
Q psy3952 3 EEFCELGGEIRLNQQVESFKENPESVTISTK--Q-G--DHLESSYALVCAGLQAD 52 (252)
Q Consensus 3 ~~a~~~G~~i~~~~~V~~i~~~~~~~~V~t~--~-g--~~i~A~~VV~AaG~ws~ 52 (252)
+.+++.|++++.+++|++++.+++++.|... + | .++.+|.||+|+|.-.+
T Consensus 247 ~~l~~~gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~Vi~a~G~~p~ 301 (491)
T 3urh_A 247 RMLTKQGIDFKLGAKVTGAVKSGDGAKVTFEPVKGGEATTLDAEVVLIATGRKPS 301 (491)
T ss_dssp HHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTSCCCEEEEESEEEECCCCEEC
T ss_pred HHHHhCCCEEEECCeEEEEEEeCCEEEEEEEecCCCceEEEEcCEEEEeeCCccC
Confidence 4567889999999999999988877665432 1 3 47999999999998654
No 162
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=93.87 E-value=0.054 Score=47.99 Aligned_cols=50 Identities=20% Similarity=0.320 Sum_probs=39.7
Q ss_pred hHHHhCCcEEEeCceeEEEEEcCCeEEEEeC---CC--cEEEcCEEEEcCCCChH
Q psy3952 3 EEFCELGGEIRLNQQVESFKENPESVTISTK---QG--DHLESSYALVCAGLQAD 52 (252)
Q Consensus 3 ~~a~~~G~~i~~~~~V~~i~~~~~~~~V~t~---~g--~~i~A~~VV~AaG~ws~ 52 (252)
+.+++.|++++.+++|++++.+++++.|... +| .++.+|.||+|+|...+
T Consensus 226 ~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~ 280 (470)
T 1dxl_A 226 RSLEKQGMKFKLKTKVVGVDTSGDGVKLTVEPSAGGEQTIIEADVVLVSAGRTPF 280 (470)
T ss_dssp HHHHHSSCCEECSEEEEEEECSSSSEEEEEEESSSCCCEEEEESEEECCCCEEEC
T ss_pred HHHHHcCCEEEeCCEEEEEEEcCCeEEEEEEecCCCcceEEECCEEEECCCCCcC
Confidence 4567889999999999999877666665532 23 47999999999998764
No 163
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=93.86 E-value=0.043 Score=51.19 Aligned_cols=51 Identities=8% Similarity=0.055 Sum_probs=38.7
Q ss_pred hhHHHhC--CcEEEeCceeEEEEEcCC---eEE-EE---eCCC--cEEEcCEEEEcCCCChH
Q psy3952 2 GEEFCEL--GGEIRLNQQVESFKENPE---SVT-IS---TKQG--DHLESSYALVCAGLQAD 52 (252)
Q Consensus 2 ~~~a~~~--G~~i~~~~~V~~i~~~~~---~~~-V~---t~~g--~~i~A~~VV~AaG~ws~ 52 (252)
.+.++++ |++|++++.|+++..+++ ++. |. ..+| ..|.|+.||+|+|.++.
T Consensus 173 ~~~a~~~~~gV~i~~~~~v~dLi~~~~~~g~v~Gv~~~~~~~g~~~~i~Ak~VVLATGG~g~ 234 (662)
T 3gyx_A 173 AEAAKNALGQDRIIERIFIVKLLLDKNTPNRIAGAVGFNLRANEVHIFKANAMVVACGGAVN 234 (662)
T ss_dssp HHHHHHHHCTTTEECSEEECCCEECSSSTTBEEEEEEEESSSSCEEEEECSEEEECCCCBCS
T ss_pred HHHHHhcCCCcEEEEceEEEEEEEeCCccceEEEEEEEEcCCCcEEEEEeCEEEECCCcccc
Confidence 4556676 999999999999988765 543 32 2344 35899999999999874
No 164
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=93.76 E-value=0.11 Score=45.66 Aligned_cols=47 Identities=11% Similarity=0.220 Sum_probs=38.6
Q ss_pred hHHHhCCcEEEeCceeEEEEEcCCeEEEEeCCCcEEEcCEEEEcCCCCh
Q psy3952 3 EEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQA 51 (252)
Q Consensus 3 ~~a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g~~i~A~~VV~AaG~ws 51 (252)
+.+++.|++++.+++|+.++.++. .|.+.+|.++.+|+||+|+|...
T Consensus 68 ~~~~~~gv~~~~~~~v~~i~~~~~--~v~~~~g~~~~~d~lviAtG~~p 114 (431)
T 1q1r_A 68 DAYAAQNIQLLGGTQVTAINRDRQ--QVILSDGRALDYDRLVLATGGRP 114 (431)
T ss_dssp HHHHHTTEEEECSCCEEEEETTTT--EEEETTSCEEECSEEEECCCEEE
T ss_pred HHHHhCCCEEEeCCEEEEEECCCC--EEEECCCCEEECCEEEEcCCCCc
Confidence 446788999999999999987654 46666776899999999999854
No 165
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=93.71 E-value=0.1 Score=44.73 Aligned_cols=53 Identities=13% Similarity=0.145 Sum_probs=43.1
Q ss_pred hCCcEEEeCceeEEEEEcC-CeEEEEeCCCcEEEcCEEEEcCCCChHHHHHHcCC
Q psy3952 7 ELGGEIRLNQQVESFKENP-ESVTISTKQGDHLESSYALVCAGLQADEMALKSGC 60 (252)
Q Consensus 7 ~~G~~i~~~~~V~~i~~~~-~~~~V~t~~g~~i~A~~VV~AaG~ws~~l~~~~g~ 60 (252)
..+..|+.+++|++++..+ ++++|++.+|.+++||.||-|-|.+|. +-+.++.
T Consensus 121 ~~~~~v~~~~~v~~~~~~~~~~v~v~~~dG~~~~adlvVgADG~~S~-vR~~l~~ 174 (412)
T 4hb9_A 121 GLANTIQWNKTFVRYEHIENGGIKIFFADGSHENVDVLVGADGSNSK-VRKQYLP 174 (412)
T ss_dssp TCTTTEECSCCEEEEEECTTSCEEEEETTSCEEEESEEEECCCTTCH-HHHHHST
T ss_pred hccceEEEEEEEEeeeEcCCCeEEEEECCCCEEEeeEEEECCCCCcc-hHHHhCC
Confidence 3467899999999998754 468899999988999999999999985 4455543
No 166
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=93.66 E-value=0.081 Score=44.13 Aligned_cols=50 Identities=16% Similarity=0.046 Sum_probs=37.5
Q ss_pred hHHHhC-CcEEEeCceeEEEEEcCCeEE-EEeCC-----CcEEEcCEEEEcCCCChH
Q psy3952 3 EEFCEL-GGEIRLNQQVESFKENPESVT-ISTKQ-----GDHLESSYALVCAGLQAD 52 (252)
Q Consensus 3 ~~a~~~-G~~i~~~~~V~~i~~~~~~~~-V~t~~-----g~~i~A~~VV~AaG~ws~ 52 (252)
+.+.+. |++++.+++|++++.+++++. |...+ +.++.||.||+|+|.-.+
T Consensus 216 ~~l~~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~ 272 (338)
T 3itj_A 216 KRAEKNEKIEILYNTVALEAKGDGKLLNALRIKNTKKNEETDLPVSGLFYAIGHTPA 272 (338)
T ss_dssp HHHHHCTTEEEECSEEEEEEEESSSSEEEEEEEETTTTEEEEEECSEEEECSCEEEC
T ss_pred HHHHhcCCeEEeecceeEEEEcccCcEEEEEEEECCCCceEEEEeCEEEEEeCCCCC
Confidence 345555 999999999999998776543 44322 347999999999998653
No 167
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=93.52 E-value=0.032 Score=52.30 Aligned_cols=48 Identities=15% Similarity=0.122 Sum_probs=37.3
Q ss_pred hHHHhCCcEEEeCceeEEEEEcCCeEEEE---eCCCcEEEcCEEEEcCCCChH
Q psy3952 3 EEFCELGGEIRLNQQVESFKENPESVTIS---TKQGDHLESSYALVCAGLQAD 52 (252)
Q Consensus 3 ~~a~~~G~~i~~~~~V~~i~~~~~~~~V~---t~~g~~i~A~~VV~AaG~ws~ 52 (252)
+.++++|++++++++|++|+.++ ..+. ++++.++.||.||+|+|...+
T Consensus 575 ~~l~~~GV~i~~~~~V~~i~~~~--~~v~~~~~~~~~~i~aD~VV~A~G~~p~ 625 (690)
T 3k30_A 575 RRLIENGVARVTDHAVVAVGAGG--VTVRDTYASIERELECDAVVMVTARLPR 625 (690)
T ss_dssp HHHHHTTCEEEESEEEEEEETTE--EEEEETTTCCEEEEECSEEEEESCEEEC
T ss_pred HHHHHCCCEEEcCcEEEEEECCe--EEEEEccCCeEEEEECCEEEECCCCCCC
Confidence 45778999999999999997543 4443 445557999999999998653
No 168
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=93.49 E-value=0.085 Score=48.44 Aligned_cols=56 Identities=16% Similarity=0.073 Sum_probs=39.5
Q ss_pred HHhCCcEEEeCceeEEEEEcC----CeEE-EEe--CCC--cEEEc-CEEEEcCCCC-hHHHHHHcCC
Q psy3952 5 FCELGGEIRLNQQVESFKENP----ESVT-IST--KQG--DHLES-SYALVCAGLQ-ADEMALKSGC 60 (252)
Q Consensus 5 a~~~G~~i~~~~~V~~i~~~~----~~~~-V~t--~~g--~~i~A-~~VV~AaG~w-s~~l~~~~g~ 60 (252)
+++.|++|++++.|++|..++ +++. |+. .+| .++.| +.||+|||+. +..|+...|+
T Consensus 241 ~~~~nl~i~~~~~v~~l~~~~~~~~~~~~GV~~~~~~g~~~~v~A~k~VILaaG~~~sp~lL~~SGI 307 (587)
T 1gpe_A 241 YQRSNLEILTGQMVGKVLFKQTASGPQAVGVNFGTNKAVNFDVFAKHEVLLAAGSAISPLILEYSGI 307 (587)
T ss_dssp TTCTTEEEEESCEEEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEEECSCTTTHHHHHHHTTE
T ss_pred hcCCCcEEEcCCEEEEEEECCCCCCCEEEEEEEEeCCCcEEEEEecccEEEccCCCCCHHHHHhCCC
Confidence 346699999999999998753 2332 432 345 35788 8999999984 6677666553
No 169
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=93.34 E-value=0.1 Score=46.59 Aligned_cols=49 Identities=20% Similarity=0.281 Sum_probs=39.4
Q ss_pred hHHHhCCcEEEeCceeEEEEEcCCeEEEE-eCCCcEEEcCEEEEcCCCCh
Q psy3952 3 EEFCELGGEIRLNQQVESFKENPESVTIS-TKQGDHLESSYALVCAGLQA 51 (252)
Q Consensus 3 ~~a~~~G~~i~~~~~V~~i~~~~~~~~V~-t~~g~~i~A~~VV~AaG~ws 51 (252)
+.+++.|++++.+++|+.++.+++.+.|. ++++.++.+|+||+|+|.+.
T Consensus 100 ~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~g~~~~~~~d~lviAtG~~p 149 (490)
T 2bc0_A 100 EELESLGAKVYMESPVQSIDYDAKTVTALVDGKNHVETYDKLIFATGSQP 149 (490)
T ss_dssp HHHHHTTCEEETTCCEEEEETTTTEEEEEETTEEEEEECSEEEECCCEEE
T ss_pred HHHHhCCCEEEeCCEEEEEECCCCEEEEEeCCcEEEEECCEEEECCCCCc
Confidence 45677899999999999998877778776 33334699999999999754
No 170
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=93.22 E-value=0.071 Score=47.22 Aligned_cols=48 Identities=25% Similarity=0.405 Sum_probs=38.6
Q ss_pred hHHHhCCcEEEeCceeEEEEEcCCeEEEEeCCC--cEEEcCEEEEcCCCChH
Q psy3952 3 EEFCELGGEIRLNQQVESFKENPESVTISTKQG--DHLESSYALVCAGLQAD 52 (252)
Q Consensus 3 ~~a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g--~~i~A~~VV~AaG~ws~ 52 (252)
+.+++.|++++.+++|++++. + ++.|.+++| .++.+|.||+|+|...+
T Consensus 220 ~~l~~~gv~i~~~~~v~~i~~-~-~v~v~~~~G~~~~i~~D~vv~a~G~~p~ 269 (458)
T 1lvl_A 220 ESLKKLGIALHLGHSVEGYEN-G-CLLANDGKGGQLRLEADRVLVAVGRRPR 269 (458)
T ss_dssp HHHHHHTCEEETTCEEEEEET-T-EEEEECSSSCCCEECCSCEEECCCEEEC
T ss_pred HHHHHCCCEEEECCEEEEEEe-C-CEEEEECCCceEEEECCEEEECcCCCcC
Confidence 456788999999999999986 4 366665445 57999999999998764
No 171
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=93.15 E-value=0.077 Score=49.44 Aligned_cols=44 Identities=16% Similarity=0.141 Sum_probs=37.2
Q ss_pred CCcEEEeCceeEEEEEcCCeEEEEeCC------CcEEEcCEEEEcCCCCh
Q psy3952 8 LGGEIRLNQQVESFKENPESVTISTKQ------GDHLESSYALVCAGLQA 51 (252)
Q Consensus 8 ~G~~i~~~~~V~~i~~~~~~~~V~t~~------g~~i~A~~VV~AaG~ws 51 (252)
.+.+|+.+++|++|+..+++|+|++.+ |.+++||+||+|..+..
T Consensus 409 ~~l~I~l~~~V~~I~~~~~~v~V~~~~~~~~~~~~~~~Ad~VI~tvP~~v 458 (662)
T 2z3y_A 409 EGLDIKLNTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLGV 458 (662)
T ss_dssp TTCEEETTEEEEEEEEETTEEEEEEEESSCTTCEEEEEESEEEECCCHHH
T ss_pred hcCceecCCeEEEEEECCCcEEEEEeecccCCCCeEEEeCEEEECCCHHH
Confidence 477999999999999999899887654 44799999999988653
No 172
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=93.13 E-value=0.16 Score=42.43 Aligned_cols=57 Identities=14% Similarity=-0.021 Sum_probs=40.8
Q ss_pred HHHhCCcEEEeCceeEEEEEcCCeEEEEeC---CC--cEEEcCEEEEcCCCChH-HHHHHcCC
Q psy3952 4 EFCELGGEIRLNQQVESFKENPESVTISTK---QG--DHLESSYALVCAGLQAD-EMALKSGC 60 (252)
Q Consensus 4 ~a~~~G~~i~~~~~V~~i~~~~~~~~V~t~---~g--~~i~A~~VV~AaG~ws~-~l~~~~g~ 60 (252)
.+++.|++++.+++|++++.+++...|... +| .++.+|.||+|+|...+ .+++.+|+
T Consensus 200 ~l~~~gv~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~ 262 (335)
T 2zbw_A 200 AHEEGRLEVLTPYELRRVEGDERVRWAVVFHNQTQEELALEVDAVLILAGYITKLGPLANWGL 262 (335)
T ss_dssp HHHTTSSEEETTEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECCCEEEECGGGGGSCC
T ss_pred ccccCCeEEecCCcceeEccCCCeeEEEEEECCCCceEEEecCEEEEeecCCCCchHhhhcce
Confidence 355669999999999999885442234332 45 47999999999998765 35555553
No 173
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=93.09 E-value=0.12 Score=46.13 Aligned_cols=49 Identities=12% Similarity=0.018 Sum_probs=37.9
Q ss_pred hHHHhCCcEEEeCceeEEEEEcCC-eEEEEeCCC-----cEEEcCEEEEcCCCCh
Q psy3952 3 EEFCELGGEIRLNQQVESFKENPE-SVTISTKQG-----DHLESSYALVCAGLQA 51 (252)
Q Consensus 3 ~~a~~~G~~i~~~~~V~~i~~~~~-~~~V~t~~g-----~~i~A~~VV~AaG~ws 51 (252)
+.+++.|++++.+++|++++..++ .+.|.+.++ .++.+|.||+|+|.-.
T Consensus 235 ~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~~~~D~vi~a~G~~p 289 (483)
T 3dgh_A 235 ASMEERGIPFLRKTVPLSVEKQDDGKLLVKYKNVETGEESEDVYDTVLWAIGRKG 289 (483)
T ss_dssp HHHHHTTCCEEETEEEEEEEECTTSCEEEEEEETTTCCEEEEEESEEEECSCEEE
T ss_pred HHHHhCCCEEEeCCEEEEEEEcCCCcEEEEEecCCCCceeEEEcCEEEECccccc
Confidence 456788999999999999998654 455654333 2699999999999754
No 174
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=93.04 E-value=0.14 Score=45.80 Aligned_cols=48 Identities=15% Similarity=0.312 Sum_probs=37.8
Q ss_pred hHHHhCCcEEEeCceeEEEEEcCCeE-EEEeCCCcEEEcCEEEEcCCCChH
Q psy3952 3 EEFCELGGEIRLNQQVESFKENPESV-TISTKQGDHLESSYALVCAGLQAD 52 (252)
Q Consensus 3 ~~a~~~G~~i~~~~~V~~i~~~~~~~-~V~t~~g~~i~A~~VV~AaG~ws~ 52 (252)
+.+++.|++++++++|++++. ++++ .|.++ |.++.||.||+|+|.-.+
T Consensus 244 ~~l~~~GV~i~~~~~v~~i~~-~~~v~~v~~~-g~~i~~D~Vi~a~G~~p~ 292 (490)
T 2bc0_A 244 KNMEEHGIQLAFGETVKEVAG-NGKVEKIITD-KNEYDVDMVILAVGFRPN 292 (490)
T ss_dssp HHHHTTTCEEEETCCEEEEEC-SSSCCEEEES-SCEEECSEEEECCCEEEC
T ss_pred HHHHhCCeEEEeCCEEEEEEc-CCcEEEEEEC-CcEEECCEEEECCCCCcC
Confidence 456788999999999999986 3444 36664 448999999999998654
No 175
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=92.96 E-value=0.15 Score=43.61 Aligned_cols=51 Identities=8% Similarity=0.103 Sum_probs=36.7
Q ss_pred hhHHHh-CCcEEEeCceeEEEEEcC-----------------C--eEE-EEe------CC--------CcEEEcCEEEEc
Q psy3952 2 GEEFCE-LGGEIRLNQQVESFKENP-----------------E--SVT-IST------KQ--------GDHLESSYALVC 46 (252)
Q Consensus 2 ~~~a~~-~G~~i~~~~~V~~i~~~~-----------------~--~~~-V~t------~~--------g~~i~A~~VV~A 46 (252)
.+.+++ .|++++++++|+++..++ + ++. |.+ .. ..+|+|++||+|
T Consensus 167 ~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~GVv~~~~~v~~~g~~~~~~d~~~i~Ak~VV~A 246 (344)
T 3jsk_A 167 LSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVVTNWTLVSMHHDDQSAMDPNTINAPVIIST 246 (344)
T ss_dssp HHHHHTCTTEEEEETEEEEEEEEEEC----------------CCEEEEEEEEEEHHHHTTSSSSSCCBCEEEECSEEEEC
T ss_pred HHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccccCCCceEeEEEeeeeeeeccCCcccccCceEEEcCEEEEC
Confidence 345666 599999999999998755 2 332 322 12 236999999999
Q ss_pred CCCChH
Q psy3952 47 AGLQAD 52 (252)
Q Consensus 47 aG~ws~ 52 (252)
+|..+.
T Consensus 247 TG~~s~ 252 (344)
T 3jsk_A 247 TGHDGP 252 (344)
T ss_dssp CCSSSS
T ss_pred CCCCch
Confidence 999874
No 176
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=92.89 E-value=0.12 Score=43.01 Aligned_cols=58 Identities=10% Similarity=-0.012 Sum_probs=41.6
Q ss_pred hHHHhCCcEEEeCceeEEEEEcCCeEEEEeCC-----CcEEEcCEEEEcCCCCh-HHHHHHcCC
Q psy3952 3 EEFCELGGEIRLNQQVESFKENPESVTISTKQ-----GDHLESSYALVCAGLQA-DEMALKSGC 60 (252)
Q Consensus 3 ~~a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~-----g~~i~A~~VV~AaG~ws-~~l~~~~g~ 60 (252)
+.+++.|++++.+++|++++.+++...|...+ +.++.+|.||+|+|.-. ..+++.+|+
T Consensus 197 ~~l~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~~~~~~~ 260 (332)
T 3lzw_A 197 ENLHASKVNVLTPFVPAELIGEDKIEQLVLEEVKGDRKEILEIDDLIVNYGFVSSLGPIKNWGL 260 (332)
T ss_dssp HHHHHSSCEEETTEEEEEEECSSSCCEEEEEETTSCCEEEEECSEEEECCCEECCCGGGGGSSC
T ss_pred HHHhcCCeEEEeCceeeEEecCCceEEEEEEecCCCceEEEECCEEEEeeccCCCchHHhhcCc
Confidence 45678999999999999998766543443322 34699999999999765 244444443
No 177
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=92.83 E-value=0.16 Score=45.12 Aligned_cols=50 Identities=22% Similarity=0.168 Sum_probs=39.4
Q ss_pred hHHHhCCcEEEeCceeEEEEEcCCe--EEEEeCC-------CcEEEcCEEEEcCCCChH
Q psy3952 3 EEFCELGGEIRLNQQVESFKENPES--VTISTKQ-------GDHLESSYALVCAGLQAD 52 (252)
Q Consensus 3 ~~a~~~G~~i~~~~~V~~i~~~~~~--~~V~t~~-------g~~i~A~~VV~AaG~ws~ 52 (252)
+.+++.|++++.+++|++++..+++ +.|.+.+ |.++.+|.||+|+|...+
T Consensus 236 ~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~~p~ 294 (478)
T 3dk9_A 236 EELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVPN 294 (478)
T ss_dssp HHHHHTTCEEETTEEEEEEEECSSSEEEEEEECCTTSCCEEEEEEEESEEEECSCEEES
T ss_pred HHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEccCCCCcccceEEEcCEEEEeeccccC
Confidence 4567889999999999999886554 5666653 247999999999997654
No 178
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=92.83 E-value=0.21 Score=43.83 Aligned_cols=48 Identities=15% Similarity=0.249 Sum_probs=38.3
Q ss_pred hhHHHhCCcEEEeCceeEEEEEcCCeEEEEeCCCcEEEcCEEEEcCCCChH
Q psy3952 2 GEEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQAD 52 (252)
Q Consensus 2 ~~~a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g~~i~A~~VV~AaG~ws~ 52 (252)
.+.+++.|++++. .+|++++.++. .|++++|.++.+|+||+|+|....
T Consensus 66 ~~~~~~~gv~~~~-~~v~~id~~~~--~V~~~~g~~i~~d~lviAtG~~~~ 113 (437)
T 3sx6_A 66 RHYVERKGIHFIA-QSAEQIDAEAQ--NITLADGNTVHYDYLMIATGPKLA 113 (437)
T ss_dssp HHHHHTTTCEEEC-SCEEEEETTTT--EEEETTSCEEECSEEEECCCCEEC
T ss_pred HHHHHHCCCEEEE-eEEEEEEcCCC--EEEECCCCEEECCEEEECCCCCcC
Confidence 3456778999985 69999987665 567777767999999999998654
No 179
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=92.77 E-value=0.15 Score=44.66 Aligned_cols=44 Identities=18% Similarity=0.369 Sum_probs=36.0
Q ss_pred HHHhCCcEEEeCceeEEEEEcCCeEEEEeCCCcEEEcCEEEEcCCCC
Q psy3952 4 EFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQ 50 (252)
Q Consensus 4 ~a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g~~i~A~~VV~AaG~w 50 (252)
.+++.|++++.+ +|++|+.++.. |++++|.++..|++|+|+|..
T Consensus 65 ~~~~~gv~~i~~-~v~~Id~~~~~--V~~~~g~~i~YD~LViAtG~~ 108 (430)
T 3hyw_A 65 LLPKFNIEFINE-KAESIDPDANT--VTTQSGKKIEYDYLVIATGPK 108 (430)
T ss_dssp TGGGGTEEEECS-CEEEEETTTTE--EEETTCCEEECSEEEECCCCE
T ss_pred HHHHCCcEEEEe-EEEEEECCCCE--EEECCCCEEECCEEEEeCCCC
Confidence 356779999875 79999877664 677888789999999999974
No 180
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=92.70 E-value=0.23 Score=43.67 Aligned_cols=49 Identities=14% Similarity=0.238 Sum_probs=39.1
Q ss_pred hHHHhCCcEEEeCceeEEEEEcCCeEEEEe-CCCc--EEEcCEEEEcCCCCh
Q psy3952 3 EEFCELGGEIRLNQQVESFKENPESVTIST-KQGD--HLESSYALVCAGLQA 51 (252)
Q Consensus 3 ~~a~~~G~~i~~~~~V~~i~~~~~~~~V~t-~~g~--~i~A~~VV~AaG~ws 51 (252)
+.+++.|++++.+++|+.++.+++.+.+.+ .+|. ++.+|++|+|+|...
T Consensus 64 ~~~~~~gv~~~~~~~v~~i~~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p 115 (447)
T 1nhp_A 64 EKMESRGVNVFSNTEITAIQPKEHQVTVKDLVSGEERVENYDKLIISPGAVP 115 (447)
T ss_dssp HHHHHTTCEEEETEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEE
T ss_pred HHHHHCCCEEEECCEEEEEeCCCCEEEEEecCCCceEEEeCCEEEEcCCCCc
Confidence 346678999999999999988777777765 3452 389999999999754
No 181
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=92.66 E-value=0.14 Score=43.39 Aligned_cols=49 Identities=16% Similarity=0.230 Sum_probs=39.2
Q ss_pred HHhCC-cEEEeCceeEEEEEcCCeEEEEeCCCcEEE-cCEEEEcCCCChHH
Q psy3952 5 FCELG-GEIRLNQQVESFKENPESVTISTKQGDHLE-SSYALVCAGLQADE 53 (252)
Q Consensus 5 a~~~G-~~i~~~~~V~~i~~~~~~~~V~t~~g~~i~-A~~VV~AaG~ws~~ 53 (252)
.++.| ++++.+++|++++.+++.+.|++.+|..+. +|.||.|+|.-.+.
T Consensus 224 l~~~g~v~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~~d~vi~a~G~~~~~ 274 (369)
T 3d1c_A 224 IKQGARIEMNVHYTVKDIDFNNGQYHISFDSGQSVHTPHEPILATGFDATK 274 (369)
T ss_dssp HHTTCCEEEECSCCEEEEEEETTEEEEEESSSCCEEESSCCEECCCBCGGG
T ss_pred HhhCCcEEEecCcEEEEEEecCCceEEEecCCeEeccCCceEEeeccCCcc
Confidence 35566 999999999999877777778887785565 59999999987654
No 182
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=92.63 E-value=0.2 Score=41.22 Aligned_cols=48 Identities=17% Similarity=0.158 Sum_probs=37.4
Q ss_pred HHhCCcEEEeCceeEEEEEcCCeE---EEEeCCCc--EEEcCEEEEcCCCChH
Q psy3952 5 FCELGGEIRLNQQVESFKENPESV---TISTKQGD--HLESSYALVCAGLQAD 52 (252)
Q Consensus 5 a~~~G~~i~~~~~V~~i~~~~~~~---~V~t~~g~--~i~A~~VV~AaG~ws~ 52 (252)
.++.|++++.+++|++++.+++++ .+.+.+|. ++.+|.||+|+|.-.+
T Consensus 193 ~~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~g~~~~~~~D~vv~a~G~~p~ 245 (315)
T 3r9u_A 193 KKNEKIELITSASVDEVYGDKMGVAGVKVKLKDGSIRDLNVPGIFTFVGLNVR 245 (315)
T ss_dssp HHCTTEEEECSCEEEEEEEETTEEEEEEEECTTSCEEEECCSCEEECSCEEEC
T ss_pred HhcCCeEEEeCcEEEEEEcCCCcEEEEEEEcCCCCeEEeecCeEEEEEcCCCC
Confidence 357899999999999998877553 34444664 6999999999997543
No 183
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=92.62 E-value=0.069 Score=45.88 Aligned_cols=53 Identities=23% Similarity=0.373 Sum_probs=42.6
Q ss_pred hHHHhCCcEEEeCceeEEEEEcCCeEEEEeCCCcEEEcCEEEEcCCCChH-HHHHHcCC
Q psy3952 3 EEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQAD-EMALKSGC 60 (252)
Q Consensus 3 ~~a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g~~i~A~~VV~AaG~ws~-~l~~~~g~ 60 (252)
+.+++.|++++++++|++++ .+ .|++.+| ++.+|.||+|+|...+ .+++.+|+
T Consensus 191 ~~l~~~gV~i~~~~~v~~i~--~~--~v~~~~g-~i~~D~vi~a~G~~p~~~ll~~~gl 244 (367)
T 1xhc_A 191 DMLEETGVKFFLNSELLEAN--EE--GVLTNSG-FIEGKVKICAIGIVPNVDLARRSGI 244 (367)
T ss_dssp HHHHHTTEEEECSCCEEEEC--SS--EEEETTE-EEECSCEEEECCEEECCHHHHHTTC
T ss_pred HHHHHCCCEEEcCCEEEEEE--ee--EEEECCC-EEEcCEEEECcCCCcCHHHHHhCCC
Confidence 45778899999999999997 22 3667788 4999999999998865 37777775
No 184
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=92.62 E-value=0.17 Score=44.61 Aligned_cols=49 Identities=12% Similarity=0.192 Sum_probs=39.9
Q ss_pred hHHHhCCcEEEeCceeEEEEEcCCeEEEE-eCCCcEEEcCEEEEcCCCCh
Q psy3952 3 EEFCELGGEIRLNQQVESFKENPESVTIS-TKQGDHLESSYALVCAGLQA 51 (252)
Q Consensus 3 ~~a~~~G~~i~~~~~V~~i~~~~~~~~V~-t~~g~~i~A~~VV~AaG~ws 51 (252)
+.+++.|++++.+++|++++.+++.|.+. +.++.++.+|++|+|+|...
T Consensus 66 ~~~~~~gi~~~~~~~V~~id~~~~~v~v~~~~~~~~~~~d~lviAtG~~p 115 (452)
T 3oc4_A 66 EELRRQKIQLLLNREVVAMDVENQLIAWTRKEEQQWYSYDKLILATGASQ 115 (452)
T ss_dssp HHHHHTTEEEECSCEEEEEETTTTEEEEEETTEEEEEECSEEEECCCCCB
T ss_pred HHHHHCCCEEEECCEEEEEECCCCEEEEEecCceEEEEcCEEEECCCccc
Confidence 45678899999999999999888888775 23444799999999999853
No 185
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=92.55 E-value=0.16 Score=42.19 Aligned_cols=57 Identities=19% Similarity=0.265 Sum_probs=40.5
Q ss_pred hHHHhCCcEEEeCceeEEEEEcCCe---EEEEe-CCCc--EEEcCEEEEcCCCChH-HHHHHcC
Q psy3952 3 EEFCELGGEIRLNQQVESFKENPES---VTIST-KQGD--HLESSYALVCAGLQAD-EMALKSG 59 (252)
Q Consensus 3 ~~a~~~G~~i~~~~~V~~i~~~~~~---~~V~t-~~g~--~i~A~~VV~AaG~ws~-~l~~~~g 59 (252)
+.+++.|++++.+++|+++..++++ +.+.. .+|. ++.||.||+|+|.-.+ .+++.+|
T Consensus 198 ~~l~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~g 261 (319)
T 3cty_A 198 QEIKKRNIPYIMNAQVTEIVGDGKKVTGVKYKDRTTGEEKLIETDGVFIYVGLIPQTSFLKDSG 261 (319)
T ss_dssp HHHHHTTCCEECSEEEEEEEESSSSEEEEEEEETTTCCEEEECCSEEEECCCEEECCGGGTTSC
T ss_pred HHHhcCCcEEEcCCeEEEEecCCceEEEEEEEEcCCCceEEEecCEEEEeeCCccChHHHhhcc
Confidence 4567889999999999999887653 33332 2453 5999999999997654 3443333
No 186
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=92.48 E-value=0.31 Score=45.44 Aligned_cols=58 Identities=16% Similarity=0.252 Sum_probs=43.9
Q ss_pred hhHHHhCC---cEEEeCceeEEEEEcC--------CeEEEE--e------------------------------------
Q psy3952 2 GEEFCELG---GEIRLNQQVESFKENP--------ESVTIS--T------------------------------------ 32 (252)
Q Consensus 2 ~~~a~~~G---~~i~~~~~V~~i~~~~--------~~~~V~--t------------------------------------ 32 (252)
.+.+++.| +++..+++|++++.++ .+++|+ +
T Consensus 126 ~~~~~~~g~~~v~v~~g~~v~~~~~d~~~~~~~~~~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~~~~ 205 (665)
T 1pn0_A 126 LDSIAEISDTRIKVERPLIPEKMEIDSSKAEDPEAYPVTMTLRYMSEDESTPLQFGHKTENGLFRSNLQTQEEEDANYRL 205 (665)
T ss_dssp HHHHHHHHTTSSCEECSEEEEEEEECGGGTTCTTCCCEEEEEEECCGGGSCCCTTCCCCCSSSCCCHHHHHHHHHTSCCC
T ss_pred HHHHHhcCCCceEEEeCCEEEEEEecCcccccCCCCCEEEEEEecccccccccccccccccccccccccccccccccccc
Confidence 35566666 8999999999998864 356553 2
Q ss_pred ----CCC--cEEEcCEEEEcCCCChHHHHHHcCC
Q psy3952 33 ----KQG--DHLESSYALVCAGLQADEMALKSGC 60 (252)
Q Consensus 33 ----~~g--~~i~A~~VV~AaG~ws~~l~~~~g~ 60 (252)
.+| .+++|++||-|-|++|. +.+++|+
T Consensus 206 ~~~~~~G~~~~i~A~~VVGADG~~S~-VR~~lg~ 238 (665)
T 1pn0_A 206 PEGKEAGEIETVHCKYVIGCDGGHSW-VRRTLGF 238 (665)
T ss_dssp STTCCTTCEEEEEEEEEEECCCTTCH-HHHHHTC
T ss_pred cccCCCCceEEEEeCEEEeccCCCCH-HHHhcCC
Confidence 234 46999999999999985 6677786
No 187
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=92.47 E-value=0.2 Score=41.46 Aligned_cols=46 Identities=15% Similarity=0.151 Sum_probs=33.0
Q ss_pred HHhCCcEEEeCceeEEEEEc-CCeEEEEeCCCcEEEcCEEEEcCCCC
Q psy3952 5 FCELGGEIRLNQQVESFKEN-PESVTISTKQGDHLESSYALVCAGLQ 50 (252)
Q Consensus 5 a~~~G~~i~~~~~V~~i~~~-~~~~~V~t~~g~~i~A~~VV~AaG~w 50 (252)
+.+.+...+....+..+... .+.++|.+.+|.++.+|+||+|+|..
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~a~~liiATGs~ 116 (304)
T 4fk1_A 70 VMKYPSVHYYEKTVVMITKQSTGLFEIVTKDHTKYLAERVLLATGMQ 116 (304)
T ss_dssp HTTSTTEEEEECCEEEEEECTTSCEEEEETTCCEEEEEEEEECCCCE
T ss_pred HHhcCCEEEEeeEEEEeeecCCCcEEEEECCCCEEEeCEEEEccCCc
Confidence 44555444445566666654 45578888888789999999999974
No 188
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=92.11 E-value=0.29 Score=42.48 Aligned_cols=45 Identities=18% Similarity=0.264 Sum_probs=37.6
Q ss_pred HHHhCCcEEEeCceeEEEEEcCCeEEEEeCCCcEEEcCEEEEcCCCC
Q psy3952 4 EFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQ 50 (252)
Q Consensus 4 ~a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g~~i~A~~VV~AaG~w 50 (252)
..++.|++++.+++|+.++.... .|.+.+|.++.+|++|+|+|..
T Consensus 66 ~~~~~~i~~~~~~~v~~id~~~~--~v~~~~g~~~~~d~lvlAtG~~ 110 (410)
T 3ef6_A 66 WYGEARIDMLTGPEVTALDVQTR--TISLDDGTTLSADAIVIATGSR 110 (410)
T ss_dssp HHHHTTCEEEESCCEEEEETTTT--EEEETTSCEEECSEEEECCCEE
T ss_pred HHHHCCCEEEeCCEEEEEECCCC--EEEECCCCEEECCEEEEccCCc
Confidence 45678999999999999986654 5677777689999999999975
No 189
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=92.10 E-value=0.26 Score=43.41 Aligned_cols=49 Identities=14% Similarity=0.345 Sum_probs=39.1
Q ss_pred hHHHhCCcEEEeCceeEEEEEcCCeEEEEeC---CCcEEEcCEEEEcCCCCh
Q psy3952 3 EEFCELGGEIRLNQQVESFKENPESVTISTK---QGDHLESSYALVCAGLQA 51 (252)
Q Consensus 3 ~~a~~~G~~i~~~~~V~~i~~~~~~~~V~t~---~g~~i~A~~VV~AaG~ws 51 (252)
+.+++.|++++.+++|+.++.+++.+.+.+. ++.++.+|++|+|+|...
T Consensus 66 ~~~~~~gv~~~~~~~v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtGs~p 117 (452)
T 2cdu_A 66 EELSNLGANVQMRHQVTNVDPETKTIKVKDLITNEEKTEAYDKLIMTTGSKP 117 (452)
T ss_dssp HHHHHTTCEEEESEEEEEEEGGGTEEEEEETTTCCEEEEECSEEEECCCEEE
T ss_pred HHHHHcCCEEEeCCEEEEEEcCCCEEEEEecCCCceEEEECCEEEEccCCCc
Confidence 4467789999999999999877777777652 234799999999999754
No 190
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=92.03 E-value=0.065 Score=47.73 Aligned_cols=53 Identities=9% Similarity=0.112 Sum_probs=40.1
Q ss_pred hhHHHhCCcEEEeCceeEEEEEcCCeEEEEeCCCcEEEcCEEEEcCCCChHHHHHHc
Q psy3952 2 GEEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQADEMALKS 58 (252)
Q Consensus 2 ~~~a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g~~i~A~~VV~AaG~ws~~l~~~~ 58 (252)
++.+.+.|++|+.+++|++|..+++. |.+.+|.++.||+||.+.-+ +.+.+++
T Consensus 229 ~~~l~~~g~~i~~~~~V~~I~~~~~~--v~~~~G~~~~ad~vI~t~P~--~~l~~~l 281 (513)
T 4gde_A 229 ANTLPKEKTRFGEKGKVTKVNANNKT--VTLQDGTTIGYKKLVSTMAV--DFLAEAM 281 (513)
T ss_dssp HHTSCGGGEEESGGGCEEEEETTTTE--EEETTSCEEEEEEEEECSCH--HHHHHHT
T ss_pred HHHHHhcCeeeecceEEEEEEccCCE--EEEcCCCEEECCEEEECCCH--HHHHHhc
Confidence 34456779999999999999987765 45667778999999988654 3455544
No 191
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=92.00 E-value=0.19 Score=44.16 Aligned_cols=56 Identities=16% Similarity=0.339 Sum_probs=42.1
Q ss_pred hHHHhCCcEEEeCceeEEEEEcCCeEEEEeCCCcEEEcCEEEEcCCCChH-HHHHHcCC
Q psy3952 3 EEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQAD-EMALKSGC 60 (252)
Q Consensus 3 ~~a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g~~i~A~~VV~AaG~ws~-~l~~~~g~ 60 (252)
+..++. ++++.+++|++++.++....|.++.+ ++.||.||+|+|...+ .+++.+|+
T Consensus 198 ~~l~~~-v~i~~~~~v~~i~~~~~v~~v~~~g~-~i~~D~Vv~a~G~~p~~~l~~~~gl 254 (449)
T 3kd9_A 198 EKLKKH-VNLRLQEITMKIEGEERVEKVVTDAG-EYKAELVILATGIKPNIELAKQLGV 254 (449)
T ss_dssp HHHTTT-SEEEESCCEEEEECSSSCCEEEETTE-EEECSEEEECSCEEECCHHHHHTTC
T ss_pred HHHHhC-cEEEeCCeEEEEeccCcEEEEEeCCC-EEECCEEEEeeCCccCHHHHHhCCc
Confidence 345566 99999999999986653223556555 8999999999999854 56777775
No 192
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=91.99 E-value=0.24 Score=42.03 Aligned_cols=49 Identities=18% Similarity=0.241 Sum_probs=34.0
Q ss_pred hHHHhC-CcEEEeCceeEEEEEcC----C--eEE-EEeC--------------CCcEEEc---------------CEEEE
Q psy3952 3 EEFCEL-GGEIRLNQQVESFKENP----E--SVT-ISTK--------------QGDHLES---------------SYALV 45 (252)
Q Consensus 3 ~~a~~~-G~~i~~~~~V~~i~~~~----~--~~~-V~t~--------------~g~~i~A---------------~~VV~ 45 (252)
+.+.+. |++++++++|+++..++ + ++. |.+. ++.++.| +.||+
T Consensus 154 ~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv~~~~v~~~g~~~~~~d~~~I~A~G~~~~~~~~~~~~~~~VV~ 233 (326)
T 2gjc_A 154 SKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCCMDPNVIELAGYKNDGTRDLSQKHGVILS 233 (326)
T ss_dssp HHHHTSTTEEEETTEEEEEEEECCCC-----CEEEEEEEEHHHHTC---CCCCCCEEEEESCCCSSSCCCSSTTCCEEEE
T ss_pred HHHHHhcCcEEEecceeeeeeecccccCCCcEEEEEEecceeecccccceeccCceEEEEeeccccccccccccCCEEEE
Confidence 456664 99999999999998763 3 432 4321 2246889 99999
Q ss_pred cCCCCh
Q psy3952 46 CAGLQA 51 (252)
Q Consensus 46 AaG~ws 51 (252)
|+|..+
T Consensus 234 ATG~~~ 239 (326)
T 2gjc_A 234 TTGHDG 239 (326)
T ss_dssp CCCCC-
T ss_pred CcCCCc
Confidence 999765
No 193
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=91.98 E-value=0.16 Score=41.46 Aligned_cols=54 Identities=11% Similarity=0.198 Sum_probs=41.4
Q ss_pred hHHHhCCcEEEeCceeEEEEEcCCeEEEEeCCCcEEEcCEEEEcCCCCh-HHHHHHcCC
Q psy3952 3 EEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQA-DEMALKSGC 60 (252)
Q Consensus 3 ~~a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g~~i~A~~VV~AaG~ws-~~l~~~~g~ 60 (252)
+.+++.|++++. ++|++++.++ .|.+.+|.++.+|.||+|+|... ..+++.+|+
T Consensus 182 ~~l~~~gv~i~~-~~v~~i~~~~---~v~~~~g~~~~~D~vi~a~G~~p~~~~~~~~g~ 236 (297)
T 3fbs_A 182 ALLAARGVRVET-TRIREIAGHA---DVVLADGRSIALAGLFTQPKLRITVDWIEKLGC 236 (297)
T ss_dssp HHHHHTTCEEEC-SCEEEEETTE---EEEETTSCEEEESEEEECCEEECCCSCHHHHTC
T ss_pred HHHHHCCcEEEc-ceeeeeecCC---eEEeCCCCEEEEEEEEEccCcccCchhHHhcCC
Confidence 456788999996 8999987543 67777787899999999999863 245555664
No 194
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=91.97 E-value=0.35 Score=43.01 Aligned_cols=46 Identities=15% Similarity=0.272 Sum_probs=37.6
Q ss_pred HhCCcEEEeCceeEEEEEcCCeEEEEe-CCCc--EEEcCEEEEcCCCCh
Q psy3952 6 CELGGEIRLNQQVESFKENPESVTIST-KQGD--HLESSYALVCAGLQA 51 (252)
Q Consensus 6 ~~~G~~i~~~~~V~~i~~~~~~~~V~t-~~g~--~i~A~~VV~AaG~ws 51 (252)
++.|++++.+++|+.++.+++.+.+.+ .+|. ++.+|+||+|+|...
T Consensus 104 ~~~gv~~~~~~~v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtG~~p 152 (480)
T 3cgb_A 104 DKYGIDAKVRHEVTKVDTEKKIVYAEHTKTKDVFEFSYDRLLIATGVRP 152 (480)
T ss_dssp HTTCCEEESSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEE
T ss_pred hhcCCEEEeCCEEEEEECCCCEEEEEEcCCCceEEEEcCEEEECCCCcc
Confidence 345999999999999988777787776 4564 699999999999754
No 195
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=91.83 E-value=0.11 Score=46.24 Aligned_cols=47 Identities=19% Similarity=0.178 Sum_probs=36.6
Q ss_pred HHhCC-cEEEeCceeEEEEEcCCe------EEEEe--CCC---cEEEcCEEEEcCCCCh
Q psy3952 5 FCELG-GEIRLNQQVESFKENPES------VTIST--KQG---DHLESSYALVCAGLQA 51 (252)
Q Consensus 5 a~~~G-~~i~~~~~V~~i~~~~~~------~~V~t--~~g---~~i~A~~VV~AaG~ws 51 (252)
+++.| ++|+++++|++|+.++++ |.|++ .+| .++.||+||+|+.++.
T Consensus 250 ~~~l~~~~i~~~~~V~~I~~~~~~~~~~~~~~v~~~~~~g~~~~~~~ad~VI~a~p~~~ 308 (504)
T 1sez_A 250 CKDLREDELRLNSRVLELSCSCTEDSAIDSWSIISASPHKRQSEEESFDAVIMTAPLCD 308 (504)
T ss_dssp HTTSCTTTEETTCCEEEEEEECSSSSSSCEEEEEEBCSSSSCBCCCEESEEEECSCHHH
T ss_pred HhhcccceEEcCCeEEEEEecCCCCcccceEEEEEcCCCCccceeEECCEEEECCCHHH
Confidence 34456 789999999999987766 77654 345 4789999999998864
No 196
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=91.78 E-value=0.18 Score=43.82 Aligned_cols=45 Identities=18% Similarity=0.166 Sum_probs=36.9
Q ss_pred HHhCCcEEEeCceeEEEEEcCCeEEEEeCCCcEEEcCEEEEcCCCCh
Q psy3952 5 FCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQA 51 (252)
Q Consensus 5 a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g~~i~A~~VV~AaG~ws 51 (252)
+++.|++++.+++|+.++.++ ++|.+.+|.++.+|++|+|+|...
T Consensus 69 ~~~~~v~~~~~~~v~~i~~~~--~~v~~~~g~~~~~d~lviAtG~~~ 113 (408)
T 2gqw_A 69 KRAPEVEWLLGVTAQSFDPQA--HTVALSDGRTLPYGTLVLATGAAP 113 (408)
T ss_dssp TTSCSCEEEETCCEEEEETTT--TEEEETTSCEEECSEEEECCCEEE
T ss_pred HHHCCCEEEcCCEEEEEECCC--CEEEECCCCEEECCEEEECCCCCC
Confidence 456799999999999998654 456677776899999999999854
No 197
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=91.36 E-value=0.19 Score=48.20 Aligned_cols=44 Identities=16% Similarity=0.141 Sum_probs=36.6
Q ss_pred CCcEEEeCceeEEEEEcCCeEEEEeCC------CcEEEcCEEEEcCCCCh
Q psy3952 8 LGGEIRLNQQVESFKENPESVTISTKQ------GDHLESSYALVCAGLQA 51 (252)
Q Consensus 8 ~G~~i~~~~~V~~i~~~~~~~~V~t~~------g~~i~A~~VV~AaG~ws 51 (252)
.+..|+++++|++|...+++|+|++.+ |.++.||+||+|.-++.
T Consensus 580 ~~l~I~Lnt~V~~I~~~~~gV~V~~~~~~~~~~g~~i~AD~VIvTvPl~v 629 (852)
T 2xag_A 580 EGLDIKLNTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLGV 629 (852)
T ss_dssp TTCCEECSEEEEEEEEETTEEEEEEEESSSTTCEEEEEESEEEECCCHHH
T ss_pred hCCCEEeCCeEEEEEEcCCcEEEEEeecccCCCCeEEECCEEEECCCHHH
Confidence 367899999999999999999887643 44799999999987653
No 198
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=91.35 E-value=0.28 Score=43.81 Aligned_cols=48 Identities=23% Similarity=0.212 Sum_probs=38.3
Q ss_pred HHHhCCcEEEeCceeEEEEEcCCeEEEEeC--CC--cEEEcCEEEEcCCCChH
Q psy3952 4 EFCELGGEIRLNQQVESFKENPESVTISTK--QG--DHLESSYALVCAGLQAD 52 (252)
Q Consensus 4 ~a~~~G~~i~~~~~V~~i~~~~~~~~V~t~--~g--~~i~A~~VV~AaG~ws~ 52 (252)
..++. ++++.+++|++++.+++++.|... +| .++.+|.||+|+|...+
T Consensus 224 ~l~~~-V~i~~~~~v~~i~~~~~~v~v~~~~~~G~~~~i~~D~Vi~a~G~~p~ 275 (492)
T 3ic9_A 224 TFNEE-FYFDAKARVISTIEKEDAVEVIYFDKSGQKTTESFQYVLAATGRKAN 275 (492)
T ss_dssp HHHTT-SEEETTCEEEEEEECSSSEEEEEECTTCCEEEEEESEEEECSCCEES
T ss_pred HHhhC-cEEEECCEEEEEEEcCCEEEEEEEeCCCceEEEECCEEEEeeCCccC
Confidence 34455 999999999999988877776653 45 57999999999998653
No 199
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=91.31 E-value=0.22 Score=44.80 Aligned_cols=53 Identities=11% Similarity=0.161 Sum_probs=38.2
Q ss_pred hHHHhCCcEEEeCceeEEEEEcCCeEEEEeCCC----cEEEcCEEEEcCCCChHHHH
Q psy3952 3 EEFCELGGEIRLNQQVESFKENPESVTISTKQG----DHLESSYALVCAGLQADEMA 55 (252)
Q Consensus 3 ~~a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g----~~i~A~~VV~AaG~ws~~l~ 55 (252)
+..+++|++++++++|++++.++-...+.+.+| .+|.||.||.|+|.-.+.+.
T Consensus 280 ~~L~~~GV~v~~~~~v~~v~~~~~~~~~~~~dg~~~~~~i~ad~viwa~Gv~~~~~~ 336 (502)
T 4g6h_A 280 SHLENTSIKVHLRTAVAKVEEKQLLAKTKHEDGKITEETIPYGTLIWATGNKARPVI 336 (502)
T ss_dssp HHHHHTTCEEETTEEEEEECSSEEEEEEECTTSCEEEEEEECSEEEECCCEECCHHH
T ss_pred HHHHhcceeeecCceEEEEeCCceEEEEEecCcccceeeeccCEEEEccCCcCCHHH
Confidence 456789999999999999864322233445555 25999999999997665443
No 200
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=90.87 E-value=0.47 Score=39.40 Aligned_cols=49 Identities=12% Similarity=0.156 Sum_probs=35.3
Q ss_pred HHHh-CCcEEEeCceeEEEEEcCCeEEEEe---CCCc--EEEcCEEEEcCCCChH
Q psy3952 4 EFCE-LGGEIRLNQQVESFKENPESVTIST---KQGD--HLESSYALVCAGLQAD 52 (252)
Q Consensus 4 ~a~~-~G~~i~~~~~V~~i~~~~~~~~V~t---~~g~--~i~A~~VV~AaG~ws~ 52 (252)
.+.+ .|++++.+++|+++..++....|.. .+|. ++.+|.||+|+|.-.+
T Consensus 196 ~l~~~~gv~i~~~~~v~~i~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~ 250 (325)
T 2q7v_A 196 RAFANPKMKFIWDTAVEEIQGADSVSGVKLRNLKTGEVSELATDGVFIFIGHVPN 250 (325)
T ss_dssp HHHTCTTEEEECSEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECSCEEES
T ss_pred HHHhcCCceEecCCceEEEccCCcEEEEEEEECCCCcEEEEEcCEEEEccCCCCC
Confidence 3443 5999999999999987643223432 2453 6999999999997654
No 201
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=90.79 E-value=0.19 Score=44.61 Aligned_cols=45 Identities=11% Similarity=0.135 Sum_probs=35.8
Q ss_pred HHHhCCcEEEeCceeEEEEEcCCeEEEEeCCC--cE------EEcCEEEEcCCCCh
Q psy3952 4 EFCELGGEIRLNQQVESFKENPESVTISTKQG--DH------LESSYALVCAGLQA 51 (252)
Q Consensus 4 ~a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g--~~------i~A~~VV~AaG~ws 51 (252)
.+++.|++++.++.+.. +.+.+.|.+.+| .+ +.+|+||+|+|.+.
T Consensus 105 ~~~~~gv~~~~g~~~~~---~~~~v~V~~~~G~~~~~~~~~~i~~d~lViAtGs~p 157 (478)
T 1v59_A 105 LFKKNKVTYYKGNGSFE---DETKIRVTPVDGLEGTVKEDHILDVKNIIVATGSEV 157 (478)
T ss_dssp HHHHTTCEEEESEEEES---SSSEEEEECCTTCTTCCSSCEEEEEEEEEECCCEEE
T ss_pred HHHhCCCEEEEEEEEEc---cCCeEEEEecCCCcccccccceEEeCEEEECcCCCC
Confidence 45678999999987752 556688887666 46 99999999999876
No 202
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=90.72 E-value=0.39 Score=41.12 Aligned_cols=45 Identities=16% Similarity=0.254 Sum_probs=35.1
Q ss_pred hHHHhCCcEEEeCceeEEEEEcCCeEEEEeCCCcEEEcCEEEEcCCCC
Q psy3952 3 EEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQ 50 (252)
Q Consensus 3 ~~a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g~~i~A~~VV~AaG~w 50 (252)
+.+++.|++++.+++|+.++... +.|.+ +|.++.+|++|+|+|..
T Consensus 68 ~~~~~~~v~~~~g~~v~~id~~~--~~V~~-~g~~~~~d~lViATGs~ 112 (367)
T 1xhc_A 68 DWYRKRGIEIRLAEEAKLIDRGR--KVVIT-EKGEVPYDTLVLATGAR 112 (367)
T ss_dssp HHHHHHTEEEECSCCEEEEETTT--TEEEE-SSCEEECSEEEECCCEE
T ss_pred HHHHhCCcEEEECCEEEEEECCC--CEEEE-CCcEEECCEEEECCCCC
Confidence 34567899999999999998654 34553 44489999999999964
No 203
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=90.65 E-value=0.21 Score=41.08 Aligned_cols=45 Identities=22% Similarity=0.231 Sum_probs=35.3
Q ss_pred hHHHhCCcEEEeCceeEEEEEcC--CeEEE-EeCCCcEEEcCEEEEcCCCC
Q psy3952 3 EEFCELGGEIRLNQQVESFKENP--ESVTI-STKQGDHLESSYALVCAGLQ 50 (252)
Q Consensus 3 ~~a~~~G~~i~~~~~V~~i~~~~--~~~~V-~t~~g~~i~A~~VV~AaG~w 50 (252)
+.+++.|++++++ +|+++ .++ +.|.| .+.++ ++.+|+||+|+|..
T Consensus 70 ~~~~~~~v~~~~~-~v~~i-~~~~~~~~~v~~~~~~-~~~~d~lvlAtG~~ 117 (315)
T 3r9u_A 70 EQCMRFGLKHEMV-GVEQI-LKNSDGSFTIKLEGGK-TELAKAVIVCTGSA 117 (315)
T ss_dssp HHHTTTCCEEECC-CEEEE-EECTTSCEEEEETTSC-EEEEEEEEECCCEE
T ss_pred HHHHHcCcEEEEE-EEEEE-ecCCCCcEEEEEecCC-EEEeCEEEEeeCCC
Confidence 4566789999887 89999 766 67884 33344 89999999999974
No 204
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=90.54 E-value=0.2 Score=45.77 Aligned_cols=55 Identities=16% Similarity=0.192 Sum_probs=38.4
Q ss_pred HhCCcEEEeCceeEEEEEc----C-Ce---EEEEeCCC---cEEEc-CEEEEcCCCC-hHHHHHHcCC
Q psy3952 6 CELGGEIRLNQQVESFKEN----P-ES---VTISTKQG---DHLES-SYALVCAGLQ-ADEMALKSGC 60 (252)
Q Consensus 6 ~~~G~~i~~~~~V~~i~~~----~-~~---~~V~t~~g---~~i~A-~~VV~AaG~w-s~~l~~~~g~ 60 (252)
++.+.+|++++.|++|..+ + ++ |.+...+| .++.| +-||+|||+. +.+|+...|+
T Consensus 219 ~r~NL~Vlt~a~V~rIl~~~~~~g~~rA~GVe~~~~~g~~~~~v~A~kEVILsAGai~SPqlL~lSGI 286 (566)
T 3fim_B 219 SRPNLSVLINAQVTKLVNSGTTNGLPAFRCVEYAEQEGAPTTTVCAKKEVVLSAGSVGTPILLQLSGI 286 (566)
T ss_dssp TCTTEEEESSCEEEEEECCEEETTEEECCEEEEESSTTSCCEEEEEEEEEEECCHHHHHHHHHHHTTE
T ss_pred cCCCeEEECCCEEEEEEeecCCCCCCEEEEEEEEECCCceEEEEEeeeEEEEecCCcCChHHHHhcCC
Confidence 4569999999999999876 3 22 33444333 35888 6799999876 5666665443
No 205
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=90.48 E-value=0.33 Score=43.90 Aligned_cols=46 Identities=17% Similarity=0.247 Sum_probs=37.5
Q ss_pred HHhCCcEEEeCceeEEEEEcCCeEEEEe-CCC--cEEEcCEEEEcCCCC
Q psy3952 5 FCELGGEIRLNQQVESFKENPESVTIST-KQG--DHLESSYALVCAGLQ 50 (252)
Q Consensus 5 a~~~G~~i~~~~~V~~i~~~~~~~~V~t-~~g--~~i~A~~VV~AaG~w 50 (252)
+++.|++++.+++|++++.+++.+.+.+ .+| .++.+|+||+|+|..
T Consensus 68 ~~~~~i~~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~ 116 (565)
T 3ntd_A 68 KARFNVEVRVKHEVVAIDRAAKLVTVRRLLDGSEYQESYDTLLLSPGAA 116 (565)
T ss_dssp HHHHCCEEETTEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEE
T ss_pred HHhcCcEEEECCEEEEEECCCCEEEEEecCCCCeEEEECCEEEECCCCC
Confidence 3457999999999999998888888765 223 369999999999984
No 206
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=90.41 E-value=0.41 Score=39.39 Aligned_cols=48 Identities=23% Similarity=0.255 Sum_probs=35.6
Q ss_pred HHHh-CCcEEEeCceeEEEEEcCCeE-EEEe---CCC--cEEEcCEEEEcCCCCh
Q psy3952 4 EFCE-LGGEIRLNQQVESFKENPESV-TIST---KQG--DHLESSYALVCAGLQA 51 (252)
Q Consensus 4 ~a~~-~G~~i~~~~~V~~i~~~~~~~-~V~t---~~g--~~i~A~~VV~AaG~ws 51 (252)
.+++ .|++++.+++|+++..+++++ .|.. .+| .++.+|.||+|+|.-.
T Consensus 188 ~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p 242 (310)
T 1fl2_A 188 KLRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHNIELAGIFVQIGLLP 242 (310)
T ss_dssp HHHTCTTEEEESSEEEEEEEESSSSEEEEEEEETTTCCEEEEECSEEEECSCEEE
T ss_pred HHhhCCCeEEecCCceEEEEcCCCcEEEEEEEECCCCcEEEEEcCEEEEeeCCcc
Confidence 4555 699999999999998776554 3432 234 3689999999999754
No 207
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=90.36 E-value=0.42 Score=41.30 Aligned_cols=48 Identities=23% Similarity=0.293 Sum_probs=35.4
Q ss_pred hHHHhCCcEEEeCceeEEEEEcCCeEEEEeCCC--cEEEcCEEEEcCCCCh
Q psy3952 3 EEFCELGGEIRLNQQVESFKENPESVTISTKQG--DHLESSYALVCAGLQA 51 (252)
Q Consensus 3 ~~a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g--~~i~A~~VV~AaG~ws 51 (252)
+.+++.|++++.+ +|++++.++..+.+...++ .++.+|+||+|+|...
T Consensus 64 ~~~~~~gv~~~~~-~v~~i~~~~~~V~~~~g~~~~~~~~~d~lViAtG~~~ 113 (409)
T 3h8l_A 64 EALPEKGIQFQEG-TVEKIDAKSSMVYYTKPDGSMAEEEYDYVIVGIGAHL 113 (409)
T ss_dssp HHTGGGTCEEEEC-EEEEEETTTTEEEEECTTSCEEEEECSEEEECCCCEE
T ss_pred HHHhhCCeEEEEe-eEEEEeCCCCEEEEccCCcccceeeCCEEEECCCCCc
Confidence 3456789999987 9999987766555444332 2399999999999854
No 208
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=90.34 E-value=0.23 Score=45.49 Aligned_cols=53 Identities=15% Similarity=0.168 Sum_probs=37.1
Q ss_pred hCCcEEEeCceeEEEEEc--CCeE---EEEeCCC--cEEEc-CEEEEcCCCC-hHHHHHHcC
Q psy3952 7 ELGGEIRLNQQVESFKEN--PESV---TISTKQG--DHLES-SYALVCAGLQ-ADEMALKSG 59 (252)
Q Consensus 7 ~~G~~i~~~~~V~~i~~~--~~~~---~V~t~~g--~~i~A-~~VV~AaG~w-s~~l~~~~g 59 (252)
+.+.+|++++.|++|..+ ++++ .+...+| .++.| +-||+|||+. +.+|+...|
T Consensus 218 r~Nl~v~~~a~v~ri~~~~~~~~a~GV~~~~~~g~~~~v~A~keVILsaGa~~sp~lL~~SG 279 (577)
T 3q9t_A 218 KPNITIVPEVHSKRLIINEADRTCKGVTVVTAAGNELNFFADREVILSQGVFETPKLLMLSG 279 (577)
T ss_dssp CTTEEEECSEEEEEEEEETTTTEEEEEEEEETTSCEEEEEEEEEEEECSHHHHHHHHHHHTT
T ss_pred CCCeEEEcCcEEEEEEEeCCCCEEEEEEEEeCCCcEEEEEeeeEEEEcccccCChHHHHHcC
Confidence 468999999999999887 5543 3444435 35778 4699999886 455554443
No 209
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=90.32 E-value=0.5 Score=38.86 Aligned_cols=46 Identities=20% Similarity=0.200 Sum_probs=35.0
Q ss_pred hCCcEEEeCceeEEEEEcCCeE-EEEeC---CCc--EEEcCEEEEcCCCChH
Q psy3952 7 ELGGEIRLNQQVESFKENPESV-TISTK---QGD--HLESSYALVCAGLQAD 52 (252)
Q Consensus 7 ~~G~~i~~~~~V~~i~~~~~~~-~V~t~---~g~--~i~A~~VV~AaG~ws~ 52 (252)
+.|++++.+++|++++.+++++ .|... +|. ++.+|.||+|+|.-.+
T Consensus 191 ~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~ 242 (311)
T 2q0l_A 191 NDKIEFLTPYVVEEIKGDASGVSSLSIKNTATNEKRELVVPGFFIFVGYDVN 242 (311)
T ss_dssp CTTEEEETTEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECSCEEEC
T ss_pred CCCeEEEeCCEEEEEECCCCcEeEEEEEecCCCceEEEecCEEEEEecCccC
Confidence 4699999999999998775553 34332 553 6999999999997643
No 210
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=90.29 E-value=0.29 Score=44.40 Aligned_cols=48 Identities=15% Similarity=0.150 Sum_probs=37.7
Q ss_pred hhHHHhCCcEEEe--CceeEEEEEcCCeEEEEeCCCcEEEcCEEEEcCCCChHH
Q psy3952 2 GEEFCELGGEIRL--NQQVESFKENPESVTISTKQGDHLESSYALVCAGLQADE 53 (252)
Q Consensus 2 ~~~a~~~G~~i~~--~~~V~~i~~~~~~~~V~t~~g~~i~A~~VV~AaG~ws~~ 53 (252)
.++..+.+++++. .++|++|..++ |.|.+|.++++|.||+|+|.-+..
T Consensus 337 ~~~l~~~nV~lv~~~~~~I~~it~~g----v~~~dG~~~~~DvIV~ATGf~~~~ 386 (540)
T 3gwf_A 337 YEVYNRPNVEAVAIKENPIREVTAKG----VVTEDGVLHELDVLVFATGFDAVD 386 (540)
T ss_dssp GGGGGSTTEEEEETTTSCEEEECSSE----EEETTCCEEECSEEEECCCBSCSS
T ss_pred HHHhcCCCEEEEeCCCCCccEEecCe----EEcCCCCEEECCEEEECCccCccc
Confidence 4556677999985 67888886432 778889679999999999998754
No 211
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=90.12 E-value=0.43 Score=42.44 Aligned_cols=49 Identities=14% Similarity=0.121 Sum_probs=36.9
Q ss_pred hHHHhCCcEEEeCceeEEEEEcC-CeEEEEeC---CCc--EEEcCEEEEcCCCCh
Q psy3952 3 EEFCELGGEIRLNQQVESFKENP-ESVTISTK---QGD--HLESSYALVCAGLQA 51 (252)
Q Consensus 3 ~~a~~~G~~i~~~~~V~~i~~~~-~~~~V~t~---~g~--~i~A~~VV~AaG~ws 51 (252)
+.+++.|++++.+++|++++..+ +.+.|... +|. ++.+|.||+|+|.-.
T Consensus 233 ~~l~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~~~~D~vi~a~G~~p 287 (488)
T 3dgz_A 233 EHMESHGTQFLKGCVPSHIKKLPTNQLQVTWEDHASGKEDTGTFDTVLWAIGRVP 287 (488)
T ss_dssp HHHHHTTCEEEETEEEEEEEECTTSCEEEEEEETTTTEEEEEEESEEEECSCEEE
T ss_pred HHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEeCCCCeeEEEECCEEEEcccCCc
Confidence 45678899999999999998744 44555432 252 379999999999754
No 212
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=90.08 E-value=0.22 Score=44.64 Aligned_cols=46 Identities=7% Similarity=0.081 Sum_probs=35.6
Q ss_pred HHHhCCcEEEeCceeEEEEEcC--------CeEEEEeCCC-----cEEEcCEEEEcCCC
Q psy3952 4 EFCELGGEIRLNQQVESFKENP--------ESVTISTKQG-----DHLESSYALVCAGL 49 (252)
Q Consensus 4 ~a~~~G~~i~~~~~V~~i~~~~--------~~~~V~t~~g-----~~i~A~~VV~AaG~ 49 (252)
.|++.+..|+++++|++++... +.|+|++.++ .++.|+.||+|+|.
T Consensus 154 ~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~ar~vVlatG~ 212 (501)
T 4b63_A 154 CAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISARRTRKVVIAIGG 212 (501)
T ss_dssp HHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEEEEEEEEECCCC
T ss_pred HHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEEEEeCEEEECcCC
Confidence 4666777899999999998643 2488876432 36999999999995
No 213
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=90.05 E-value=0.44 Score=41.57 Aligned_cols=46 Identities=20% Similarity=0.353 Sum_probs=36.2
Q ss_pred hHHHhCCcEEEeCceeEEEEEcCCeEEEEeCCCcEEEcCEEEEcCCCCh
Q psy3952 3 EEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQA 51 (252)
Q Consensus 3 ~~a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g~~i~A~~VV~AaG~ws 51 (252)
+.+++.|++++. .+|+.++.++. .|.+++|.++.+|++|+|+|...
T Consensus 64 ~~~~~~gv~~~~-~~v~~id~~~~--~v~~~~g~~i~~d~liiAtG~~~ 109 (430)
T 3h28_A 64 PLLPKFNIEFIN-EKAESIDPDAN--TVTTQSGKKIEYDYLVIATGPKL 109 (430)
T ss_dssp TTGGGGTEEEEC-SCEEEEETTTT--EEEETTCCEEECSEEEECCCCEE
T ss_pred HHHHhcCCEEEE-EEEEEEECCCC--EEEECCCcEEECCEEEEcCCccc
Confidence 345678999986 58999986655 56677775799999999999863
No 214
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=89.92 E-value=0.25 Score=44.86 Aligned_cols=44 Identities=11% Similarity=0.174 Sum_probs=35.9
Q ss_pred hHHHhCCcEEEe--CceeEEEEEcCCeEEEEeCCCcEEEcCEEEEcCCCCh
Q psy3952 3 EEFCELGGEIRL--NQQVESFKENPESVTISTKQGDHLESSYALVCAGLQA 51 (252)
Q Consensus 3 ~~a~~~G~~i~~--~~~V~~i~~~~~~~~V~t~~g~~i~A~~VV~AaG~ws 51 (252)
++..+.+++++. .++|++|..++ |.|.+| ++++|.||+|+|.-+
T Consensus 346 ~al~~~nV~lv~~~~~~I~~it~~g----v~~~dG-~~~~D~IV~ATGf~~ 391 (545)
T 3uox_A 346 ETYNRDNVHLVDIREAPIQEVTPEG----IKTADA-AYDLDVIIYATGFDA 391 (545)
T ss_dssp HHTTSTTEEEEETTTSCEEEEETTE----EEESSC-EEECSEEEECCCCBS
T ss_pred HHhcCCCEEEEecCCCCceEEccCe----EEeCCC-eeecCEEEECCcccc
Confidence 455677999986 78899886432 788999 999999999999975
No 215
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=89.85 E-value=0.53 Score=40.83 Aligned_cols=46 Identities=17% Similarity=0.245 Sum_probs=37.5
Q ss_pred hHHHhCCcEEEeCceeEEEEEcCCeEEEEeCCCcEEEcCEEEEcCCCC
Q psy3952 3 EEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQ 50 (252)
Q Consensus 3 ~~a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g~~i~A~~VV~AaG~w 50 (252)
+..++.|++++.+++|+.++..+. .|.+.+|..+.+|++|+|+|..
T Consensus 73 ~~~~~~~i~~~~~~~v~~id~~~~--~v~~~~g~~~~~d~lvlAtG~~ 118 (415)
T 3lxd_A 73 QFWEDKAVEMKLGAEVVSLDPAAH--TVKLGDGSAIEYGKLIWATGGD 118 (415)
T ss_dssp HHHHHTTEEEEETCCEEEEETTTT--EEEETTSCEEEEEEEEECCCEE
T ss_pred HHHHHCCcEEEeCCEEEEEECCCC--EEEECCCCEEEeeEEEEccCCc
Confidence 345678999999999999986654 4667777689999999999964
No 216
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=89.64 E-value=0.57 Score=42.69 Aligned_cols=46 Identities=13% Similarity=0.238 Sum_probs=38.3
Q ss_pred HHhCCcEEEeCceeEEEEEcCCeEEEEe-CCCc--EEEcCEEEEcCCCC
Q psy3952 5 FCELGGEIRLNQQVESFKENPESVTIST-KQGD--HLESSYALVCAGLQ 50 (252)
Q Consensus 5 a~~~G~~i~~~~~V~~i~~~~~~~~V~t-~~g~--~i~A~~VV~AaG~w 50 (252)
+++.|++++.+++|++++.+++.+.+.+ .+|. .+.+|+||+|+|..
T Consensus 103 ~~~~gi~v~~~~~V~~id~~~~~v~v~~~~~g~~~~~~~d~lviAtG~~ 151 (588)
T 3ics_A 103 SKRFNLDIRVLSEVVKINKEEKTITIKNVTTNETYNEAYDVLILSPGAK 151 (588)
T ss_dssp HHHTTCEEECSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEE
T ss_pred HHhcCcEEEECCEEEEEECCCCEEEEeecCCCCEEEEeCCEEEECCCCC
Confidence 4578999999999999998888888765 3453 68999999999974
No 217
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=89.59 E-value=0.32 Score=42.91 Aligned_cols=45 Identities=11% Similarity=0.145 Sum_probs=35.4
Q ss_pred HHHhCCcEEEeCceeEEEEEcCCeEEEEeCCC--cEEEcCEEEEcCCCCh
Q psy3952 4 EFCELGGEIRLNQQVESFKENPESVTISTKQG--DHLESSYALVCAGLQA 51 (252)
Q Consensus 4 ~a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g--~~i~A~~VV~AaG~ws 51 (252)
.+++.|++++.++.+. + +.+.+.|.+.+| .++.+|+||+|+|...
T Consensus 105 ~~~~~gv~~~~g~~~~-~--~~~~~~v~~~~G~~~~i~~d~lIiAtGs~p 151 (470)
T 1dxl_A 105 LFKKNKVTYVKGYGKF-V--SPSEISVDTIEGENTVVKGKHIIIATGSDV 151 (470)
T ss_dssp HHHHHTCEEEESCEEE-E--ETTEEEECCSSSCCEEEECSEEEECCCEEE
T ss_pred HHHhCCCEEEEeEEEE-e--cCCEEEEEeCCCceEEEEcCEEEECCCCCC
Confidence 3567799999998664 3 456788887766 5799999999999865
No 218
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=89.58 E-value=0.47 Score=41.73 Aligned_cols=45 Identities=11% Similarity=0.089 Sum_probs=35.4
Q ss_pred HHHhCCcEEEeCceeEEEEEcCCeEEEEeCCC-cEEEcCEEEEcCCCCh
Q psy3952 4 EFCELGGEIRLNQQVESFKENPESVTISTKQG-DHLESSYALVCAGLQA 51 (252)
Q Consensus 4 ~a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g-~~i~A~~VV~AaG~ws 51 (252)
.+++.|++++.++.+. + +.+.+.|.+.+| .++.+|+||+|+|...
T Consensus 100 ~~~~~gv~~~~g~~~~-i--d~~~v~V~~~~G~~~i~~d~lViATGs~p 145 (455)
T 1ebd_A 100 LLKGNKVEIVKGEAYF-V--DANTVRVVNGDSAQTYTFKNAIIATGSRP 145 (455)
T ss_dssp HHHTTTCEEEESEEEE-E--ETTEEEEEETTEEEEEECSEEEECCCEEE
T ss_pred HHHhCCCEEEEEEEEE-c--cCCeEEEEeCCCcEEEEeCEEEEecCCCC
Confidence 4567899999988654 3 456788888776 5799999999999864
No 219
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=89.53 E-value=0.37 Score=42.98 Aligned_cols=44 Identities=14% Similarity=0.282 Sum_probs=33.7
Q ss_pred HhCCc-EEEeC--ceeEEEEEcCCeEEEEeCCCcEEEcCEEEEcCCCCh
Q psy3952 6 CELGG-EIRLN--QQVESFKENPESVTISTKQGDHLESSYALVCAGLQA 51 (252)
Q Consensus 6 ~~~G~-~i~~~--~~V~~i~~~~~~~~V~t~~g~~i~A~~VV~AaG~ws 51 (252)
+..+. +|+.+ ++|++|+.++++|+ +.+|.++.||+||+|+.++.
T Consensus 224 ~~l~~~~i~~~~~~~V~~I~~~~~~v~--~~~G~~~~ad~VI~a~p~~~ 270 (484)
T 4dsg_A 224 EKLPSEKLTFNSGFQAIAIDADAKTIT--FSNGEVVSYDYLISTVPFDN 270 (484)
T ss_dssp HHSCGGGEEECGGGCEEEEETTTTEEE--ETTSCEEECSEEEECSCHHH
T ss_pred hhhhhCeEEECCCceeEEEEecCCEEE--ECCCCEEECCEEEECCCHHH
Confidence 33443 78888 56999998888764 45665899999999997764
No 220
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=89.40 E-value=0.31 Score=43.57 Aligned_cols=43 Identities=12% Similarity=0.211 Sum_probs=35.9
Q ss_pred hCCcEEEeCceeEEEEEcCCeEEEEeCCCcEEEcCEEEEcCCCCh
Q psy3952 7 ELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQA 51 (252)
Q Consensus 7 ~~G~~i~~~~~V~~i~~~~~~~~V~t~~g~~i~A~~VV~AaG~ws 51 (252)
+.|++++.+++|++|+.++. +|.+.+|.++.+|++|+|+|...
T Consensus 102 ~~gv~~~~g~~v~~id~~~~--~V~~~~g~~i~yd~lviATGs~p 144 (493)
T 1m6i_A 102 NGGVAVLTGKKVVQLDVRDN--MVKLNDGSQITYEKCLIATGGTP 144 (493)
T ss_dssp TCEEEEEETCCEEEEEGGGT--EEEETTSCEEEEEEEEECCCEEE
T ss_pred cCCeEEEcCCEEEEEECCCC--EEEECCCCEEECCEEEECCCCCC
Confidence 56999999999999987654 56677776899999999999754
No 221
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=89.39 E-value=0.37 Score=43.15 Aligned_cols=53 Identities=21% Similarity=0.342 Sum_probs=39.9
Q ss_pred hCCcEEEeCceeEEEEEcCCeEE---EEeCCC-cEEEcCEEEEcCCCC-hHHHHHHcC
Q psy3952 7 ELGGEIRLNQQVESFKENPESVT---ISTKQG-DHLESSYALVCAGLQ-ADEMALKSG 59 (252)
Q Consensus 7 ~~G~~i~~~~~V~~i~~~~~~~~---V~t~~g-~~i~A~~VV~AaG~w-s~~l~~~~g 59 (252)
+.+.++++++.|+++..++++.+ +...++ ..+.|+.||+|||+. +..|+...|
T Consensus 223 r~nl~v~~~~~v~~i~~~~~~a~gv~~~~~~~~~~~~a~~VILsAGai~SP~LLl~SG 280 (526)
T 3t37_A 223 RKNLTILTGSRVRRLKLEGNQVRSLEVVGRQGSAEVFADQIVLCAGALESPALLMRSG 280 (526)
T ss_dssp CTTEEEECSCEEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECSHHHHHHHHHHHTT
T ss_pred CCCeEEEeCCEEEEEEecCCeEEEEEEEecCceEEEeecceEEcccccCCcchhhhcc
Confidence 45889999999999998887643 334443 458899999999986 666766544
No 222
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=89.27 E-value=0.49 Score=41.31 Aligned_cols=52 Identities=13% Similarity=0.229 Sum_probs=38.6
Q ss_pred hHHHhCCcEEEeCceeEEEEEcCCeEEEEe--CCCcEEEcCEEEEcCCCChHHHHH
Q psy3952 3 EEFCELGGEIRLNQQVESFKENPESVTIST--KQGDHLESSYALVCAGLQADEMAL 56 (252)
Q Consensus 3 ~~a~~~G~~i~~~~~V~~i~~~~~~~~V~t--~~g~~i~A~~VV~AaG~ws~~l~~ 56 (252)
+.++++|++++++++|++|+. ++++++. .+|.++.+|.||+|+|........
T Consensus 208 ~~l~~~GV~i~~~~~v~~v~~--~~v~~~~~~~~g~~i~~D~vv~a~G~~~~~~l~ 261 (430)
T 3h28_A 208 DLFAERNIDWIANVAVKAIEP--DKVIYEDLNGNTHEVPAKFTMFMPSFQGPEVVA 261 (430)
T ss_dssp HHHHHTTCEEECSCEEEEECS--SEEEEECTTSCEEEEECSEEEEECEEECCHHHH
T ss_pred HHHHHCCCEEEeCCEEEEEeC--CeEEEEecCCCceEEeeeEEEECCCCccchhHh
Confidence 457788999999999999853 3455543 225579999999999987654443
No 223
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=89.14 E-value=0.15 Score=44.69 Aligned_cols=55 Identities=18% Similarity=0.317 Sum_probs=42.4
Q ss_pred HHHhCCcEEEeCceeEEEEEcCCeEEEEeCCC--cEEEcCEEEEcCCCChHHHHHHcCC
Q psy3952 4 EFCELGGEIRLNQQVESFKENPESVTISTKQG--DHLESSYALVCAGLQADEMALKSGC 60 (252)
Q Consensus 4 ~a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g--~~i~A~~VV~AaG~ws~~l~~~~g~ 60 (252)
..+++|++++++++|++++ ++++.+++.+| .++.||.||.|+|.-.+.+....+.
T Consensus 209 ~l~~~GV~~~~~~~v~~v~--~~~~~~~~~~g~~~~i~~d~vi~~~G~~~~~~~~~~~~ 265 (430)
T 3hyw_A 209 LFAERNIDWIANVAVKAIE--PDKVIYEDLNGNTHEVPAKFTMFMPSFQGPEVVASAGD 265 (430)
T ss_dssp HHHHTTCEEECSCEEEEEC--SSEEEEECTTSCEEEEECSEEEEECEEECCHHHHTTCT
T ss_pred HHHhCCeEEEeCceEEEEe--CCceEEEeeCCCceEeecceEEEeccCCCchHHHhccc
Confidence 3567899999999999985 45566665443 4799999999999887777666653
No 224
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=89.12 E-value=0.73 Score=40.39 Aligned_cols=43 Identities=21% Similarity=0.313 Sum_probs=35.5
Q ss_pred HhCCcEEEeCceeEEEEEcCCeEEEEeCCC-cEEEcCEEEEcCCCC
Q psy3952 6 CELGGEIRLNQQVESFKENPESVTISTKQG-DHLESSYALVCAGLQ 50 (252)
Q Consensus 6 ~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g-~~i~A~~VV~AaG~w 50 (252)
++.|++++.+++|++++. +.+.|.+++| .++.+|+||+|+|..
T Consensus 70 ~~~gi~v~~~~~v~~i~~--~~~~v~~~~g~~~~~~d~lviAtG~~ 113 (449)
T 3kd9_A 70 KKRGIDLHLNAEVIEVDT--GYVRVRENGGEKSYEWDYLVFANGAS 113 (449)
T ss_dssp HHTTCEEETTCEEEEECS--SEEEEECSSSEEEEECSEEEECCCEE
T ss_pred HhcCcEEEecCEEEEEec--CCCEEEECCceEEEEcCEEEECCCCC
Confidence 678999999999999854 3467777776 379999999999964
No 225
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=89.06 E-value=0.31 Score=43.01 Aligned_cols=45 Identities=7% Similarity=0.051 Sum_probs=35.6
Q ss_pred HHHhCCcEEEeCceeEEEEEcCCeEEEEeCCC--cEEEcCEEEEcCCCCh
Q psy3952 4 EFCELGGEIRLNQQVESFKENPESVTISTKQG--DHLESSYALVCAGLQA 51 (252)
Q Consensus 4 ~a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g--~~i~A~~VV~AaG~ws 51 (252)
.+++.|++++.++.+. .+.+.+.|.+.+| .++.+|+||+|+|..+
T Consensus 100 ~~~~~gv~~~~g~~~~---id~~~v~V~~~~G~~~~~~~d~lViAtG~~~ 146 (464)
T 2a8x_A 100 LMKKNKITEIHGYGTF---ADANTLLVDLNDGGTESVTFDNAIIATGSST 146 (464)
T ss_dssp HHHHTTCEEECEEEEE---SSSSEEEEEETTSCCEEEEEEEEEECCCEEE
T ss_pred HHHhCCCEEEEeEEEE---ecCCeEEEEeCCCceEEEEcCEEEECCCCCC
Confidence 4567899999887654 3556688888777 5799999999999865
No 226
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=88.95 E-value=0.25 Score=43.95 Aligned_cols=46 Identities=11% Similarity=0.104 Sum_probs=34.6
Q ss_pred HHHhCCcEEEeCceeEEEEEcCCeEEEEeCCC------------cEEEcCEEEEcCCCChH
Q psy3952 4 EFCELGGEIRLNQQVESFKENPESVTISTKQG------------DHLESSYALVCAGLQAD 52 (252)
Q Consensus 4 ~a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g------------~~i~A~~VV~AaG~ws~ 52 (252)
.++++|++++.++.+. .+++.+.|.+.+| .++.+|+||+|+|.+..
T Consensus 104 ~~~~~gv~~~~g~~~~---~~~~~v~v~~~~g~~~~~~~~~g~~~~i~ad~lViAtGs~p~ 161 (482)
T 1ojt_A 104 MAKSRKVDVIQGDGQF---LDPHHLEVSLTAGDAYEQAAPTGEKKIVAFKNCIIAAGSRVT 161 (482)
T ss_dssp HHHHTTCEEEEEEEEE---EETTEEEEEEEEEEETTEEEEEEEEEEEEEEEEEECCCEEEC
T ss_pred HHHhCCcEEEeeEEEE---ccCCEEEEEecCCcccccccccCcceEEEcCEEEECCCCCCC
Confidence 4567899999988654 3455677765444 47999999999999853
No 227
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=88.75 E-value=0.75 Score=38.17 Aligned_cols=48 Identities=15% Similarity=0.158 Sum_probs=36.0
Q ss_pred HHhCCcEEEeCceeEEEEEcCC--e---EEEEe-CCC--cEEEcCEEEEcCCCChH
Q psy3952 5 FCELGGEIRLNQQVESFKENPE--S---VTIST-KQG--DHLESSYALVCAGLQAD 52 (252)
Q Consensus 5 a~~~G~~i~~~~~V~~i~~~~~--~---~~V~t-~~g--~~i~A~~VV~AaG~ws~ 52 (252)
.++.|++++.+++|++++.+++ + +.+.+ .+| .++.+|.||+|+|.-.+
T Consensus 205 ~~~~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~ 260 (333)
T 1vdc_A 205 LSNPKIDVIWNSSVVEAYGDGERDVLGGLKVKNVVTGDVSDLKVSGLFFAIGHEPA 260 (333)
T ss_dssp HTCTTEEEECSEEEEEEEESSSSSSEEEEEEEETTTCCEEEEECSEEEECSCEEES
T ss_pred HhCCCeeEecCCceEEEeCCCCccceeeEEEEecCCCceEEEecCEEEEEeCCccc
Confidence 3568999999999999988764 3 33332 133 47999999999998654
No 228
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=88.54 E-value=0.57 Score=41.38 Aligned_cols=44 Identities=14% Similarity=0.266 Sum_probs=34.3
Q ss_pred hCCcEEEeCceeEEEEEcCCeEEEEe-CCCc--EEEcCEEEEcCCCC
Q psy3952 7 ELGGEIRLNQQVESFKENPESVTIST-KQGD--HLESSYALVCAGLQ 50 (252)
Q Consensus 7 ~~G~~i~~~~~V~~i~~~~~~~~V~t-~~g~--~i~A~~VV~AaG~w 50 (252)
+.|++++.+++|++++.+++.+.+.+ .+|. .+.+|++|+|+|..
T Consensus 78 ~~gi~~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~ 124 (472)
T 3iwa_A 78 NKDVEALVETRAHAIDRAAHTVEIENLRTGERRTLKYDKLVLALGSK 124 (472)
T ss_dssp ---CEEECSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEE
T ss_pred hcCcEEEECCEEEEEECCCCEEEEeecCCCCEEEEECCEEEEeCCCC
Confidence 57999999999999998888888775 2343 69999999999974
No 229
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=88.29 E-value=0.89 Score=39.23 Aligned_cols=45 Identities=13% Similarity=0.187 Sum_probs=36.5
Q ss_pred hHHHhCCcEEEeCceeEEEEEcCCeEEEEeCCCcEEEcCEEEEcCCCC
Q psy3952 3 EEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQ 50 (252)
Q Consensus 3 ~~a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g~~i~A~~VV~AaG~w 50 (252)
+..++.|++++. ++|+.++.++. .|.+.+|.++.+|++|+|+|..
T Consensus 65 ~~~~~~~i~~~~-~~v~~id~~~~--~v~~~~g~~~~~d~lvlAtG~~ 109 (404)
T 3fg2_P 65 KFFQDQAIELIS-DRMVSIDREGR--KLLLASGTAIEYGHLVLATGAR 109 (404)
T ss_dssp HHHHHTTEEEEC-CCEEEEETTTT--EEEESSSCEEECSEEEECCCEE
T ss_pred HHHHhCCCEEEE-EEEEEEECCCC--EEEECCCCEEECCEEEEeeCCC
Confidence 345678999999 99999987665 4666777689999999999963
No 230
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=88.12 E-value=0.52 Score=42.82 Aligned_cols=46 Identities=17% Similarity=0.221 Sum_probs=36.3
Q ss_pred hhHHHhCCcEEE--eCceeEEEEEcCCeEEEEeCCCcEEEcCEEEEcCCCChH
Q psy3952 2 GEEFCELGGEIR--LNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQAD 52 (252)
Q Consensus 2 ~~~a~~~G~~i~--~~~~V~~i~~~~~~~~V~t~~g~~i~A~~VV~AaG~ws~ 52 (252)
.++..+.+++++ ..++|++|..++ |.|.+| ++.+|.||+|+|.-+.
T Consensus 350 ~~al~~~~V~lvd~~~~~I~~it~~g----v~~~dG-~~~~D~iI~ATGf~~~ 397 (549)
T 4ap3_A 350 YETYNRDNVELVDLRSTPIVGMDETG----IVTTGA-HYDLDMIVLATGFDAM 397 (549)
T ss_dssp GGGGGSTTEEEEETTTSCEEEEETTE----EEESSC-EEECSEEEECCCEEES
T ss_pred HHHhcCCCEEEEeCCCCCceEEeCCc----EEeCCC-ceecCEEEECCccccc
Confidence 455667789987 247888887432 778899 9999999999999765
No 231
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=87.76 E-value=0.73 Score=42.84 Aligned_cols=47 Identities=13% Similarity=0.301 Sum_probs=36.4
Q ss_pred hHHHhCCcEEEeCceeEEEEEcCCeEEEEeCCC--cEEEcCEEEEcCCCChH
Q psy3952 3 EEFCELGGEIRLNQQVESFKENPESVTISTKQG--DHLESSYALVCAGLQAD 52 (252)
Q Consensus 3 ~~a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g--~~i~A~~VV~AaG~ws~ 52 (252)
+.+++.|++++.+++|++++ ++++.++ .+| .++.||.||+|+|.-.+
T Consensus 581 ~~l~~~GV~v~~~~~v~~i~--~~~v~~~-~~G~~~~i~~D~Vi~a~G~~p~ 629 (671)
T 1ps9_A 581 TTLLSRGVKMIPGVSYQKID--DDGLHVV-INGETQVLAVDNVVICAGQEPN 629 (671)
T ss_dssp HHHHHTTCEEECSCEEEEEE--TTEEEEE-ETTEEEEECCSEEEECCCEEEC
T ss_pred HHHHhcCCEEEeCcEEEEEe--CCeEEEe-cCCeEEEEeCCEEEECCCcccc
Confidence 34678899999999999987 3456554 344 47999999999998653
No 232
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=87.60 E-value=0.63 Score=42.97 Aligned_cols=54 Identities=17% Similarity=0.158 Sum_probs=38.2
Q ss_pred hCCcEEEeCceeEEEEEcCC--e---EEEEe-CCC--cEEEcCEEEEcCCCCh-HHHHHHcCC
Q psy3952 7 ELGGEIRLNQQVESFKENPE--S---VTIST-KQG--DHLESSYALVCAGLQA-DEMALKSGC 60 (252)
Q Consensus 7 ~~G~~i~~~~~V~~i~~~~~--~---~~V~t-~~g--~~i~A~~VV~AaG~ws-~~l~~~~g~ 60 (252)
+.|++|++++.|++|..+++ + +.+.. .+| .++.|+.||+|+|... ..++...|+
T Consensus 272 ~~nv~v~~~~~V~~i~~~~~~~~v~GV~~~~~~~g~~~~i~A~~VIlaaG~~~s~~lL~~sgi 334 (623)
T 3pl8_A 272 EERFNLFPAVACERVVRNALNSEIESLHIHDLISGDRFEIKADVYVLTAGAVHNTQLLVNSGF 334 (623)
T ss_dssp EEEEEEECSEEEEEEEECTTSSCEEEEEEEETTTCCEEEECEEEEEECSCTTHHHHHHHTTTS
T ss_pred CCCEEEEeCCEEEEEEEECCCCEEEEEEEEEcCCCcEEEEECCEEEEcCCCcCCHHHHHhcCC
Confidence 45899999999999988643 3 23332 234 3688999999999864 456555544
No 233
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=87.33 E-value=0.63 Score=40.85 Aligned_cols=54 Identities=17% Similarity=0.220 Sum_probs=40.4
Q ss_pred hHHHhCCcEEEeCceeEEEEEcCCeEEEEeCCCcEEEcCEEEEcCCCChH-HHHHHcCC
Q psy3952 3 EEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQAD-EMALKSGC 60 (252)
Q Consensus 3 ~~a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g~~i~A~~VV~AaG~ws~-~l~~~~g~ 60 (252)
+..++.|++++.+++|++++ ++ .|.+.+|.++.+|.|++|+|.-.+ .+++..|+
T Consensus 196 ~~l~~~gV~i~~~~~v~~~~--~~--~v~~~~g~~~~~D~vl~a~G~~Pn~~~~~~~gl 250 (437)
T 4eqs_A 196 DELDKREIPYRLNEEINAIN--GN--EITFKSGKVEHYDMIIEGVGTHPNSKFIESSNI 250 (437)
T ss_dssp HHHHHTTCCEEESCCEEEEE--TT--EEEETTSCEEECSEEEECCCEEESCGGGTTSSC
T ss_pred HHhhccceEEEeccEEEEec--CC--eeeecCCeEEeeeeEEEEeceecCcHHHHhhhh
Confidence 45678899999999999875 23 356667778999999999997643 34444554
No 234
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=86.82 E-value=0.74 Score=39.43 Aligned_cols=44 Identities=11% Similarity=0.114 Sum_probs=35.8
Q ss_pred HHhCCcEEEeCceeEEEEEcCCeEEEEeCCCcEEEcCEEEEcCCCCh
Q psy3952 5 FCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQA 51 (252)
Q Consensus 5 a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g~~i~A~~VV~AaG~ws 51 (252)
+++.|++++.+++|+.+...+. +|.++++ ++.+|++|+|+|...
T Consensus 70 ~~~~~v~~~~~~~v~~i~~~~~--~v~~~~~-~~~~d~lviAtG~~p 113 (384)
T 2v3a_A 70 AEQLNARILTHTRVTGIDPGHQ--RIWIGEE-EVRYRDLVLAWGAEP 113 (384)
T ss_dssp HHHTTCEEECSCCCCEEEGGGT--EEEETTE-EEECSEEEECCCEEE
T ss_pred HHhCCcEEEeCCEEEEEECCCC--EEEECCc-EEECCEEEEeCCCCc
Confidence 4678999999999999986544 4566666 899999999999754
No 235
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=86.65 E-value=0.97 Score=37.06 Aligned_cols=48 Identities=13% Similarity=0.250 Sum_probs=36.3
Q ss_pred hHHHhCCcEEEeCceeEEEEEcCCeEEEEeCCCcEEEcCEEEEcCCCCh
Q psy3952 3 EEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQA 51 (252)
Q Consensus 3 ~~a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g~~i~A~~VV~AaG~ws 51 (252)
+.+++.+.++... .|.......+.+.+.+.++.++.+++||+|+|...
T Consensus 74 ~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~~~~~~~~~liiATG~~~ 121 (314)
T 4a5l_A 74 TQSEKYGTTIITE-TIDHVDFSTQPFKLFTEEGKEVLTKSVIIATGATA 121 (314)
T ss_dssp HHHHHTTCEEECC-CEEEEECSSSSEEEEETTCCEEEEEEEEECCCEEE
T ss_pred HHHhhcCcEEEEe-EEEEeecCCCceEEEECCCeEEEEeEEEEcccccc
Confidence 3466788888754 57766666666667777776899999999999743
No 236
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=86.44 E-value=1.2 Score=38.13 Aligned_cols=46 Identities=11% Similarity=0.225 Sum_probs=36.3
Q ss_pred hHHHhCCcEEEeCceeEEEEEcCCeEEEEeCCCcEEEcCEEEEcCCCCh
Q psy3952 3 EEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQA 51 (252)
Q Consensus 3 ~~a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g~~i~A~~VV~AaG~ws 51 (252)
+.+.+.|+++++. +|++|+.+.. .|.+.+|.++..|++|+|+|...
T Consensus 63 ~~~~~~gv~~i~~-~v~~id~~~~--~v~~~~g~~i~yd~LviAtG~~~ 108 (401)
T 3vrd_B 63 DGLRAHGIQVVHD-SALGIDPDKK--LVKTAGGAEFAYDRCVVAPGIDL 108 (401)
T ss_dssp HHHHHTTCEEECS-CEEEEETTTT--EEEETTSCEEECSEEEECCCEEE
T ss_pred HHHHHCCCEEEEe-EEEEEEccCc--EEEecccceeecceeeeccCCcc
Confidence 3456789999865 7999987665 35677777899999999999854
No 237
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=85.98 E-value=0.82 Score=38.13 Aligned_cols=47 Identities=13% Similarity=0.138 Sum_probs=35.0
Q ss_pred HhCCcEEEeCceeEEEEEcCCe--EEEEe-CCC--cEEEcCEEEEcCCCChH
Q psy3952 6 CELGGEIRLNQQVESFKENPES--VTIST-KQG--DHLESSYALVCAGLQAD 52 (252)
Q Consensus 6 ~~~G~~i~~~~~V~~i~~~~~~--~~V~t-~~g--~~i~A~~VV~AaG~ws~ 52 (252)
++.|++++.+++|++++.+++. +.+.. .+| .++.+|.||+|+|.-.+
T Consensus 202 ~~~gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~ 253 (335)
T 2a87_A 202 NNDKIRFLTNHTVVAVDGDTTVTGLRVRDTNTGAETTLPVTGVFVAIGHEPR 253 (335)
T ss_dssp HCTTEEEECSEEEEEEECSSSCCEEEEEEETTSCCEEECCSCEEECSCEEEC
T ss_pred ccCCcEEEeCceeEEEecCCcEeEEEEEEcCCCceEEeecCEEEEccCCccC
Confidence 5689999999999999876532 44442 133 47999999999997543
No 238
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=85.80 E-value=1.4 Score=38.51 Aligned_cols=47 Identities=9% Similarity=0.154 Sum_probs=37.5
Q ss_pred HHhCCcEEEeCceeEEEEEcCCeEEEEeC---CCcEEEcCEEEEcCCCCh
Q psy3952 5 FCELGGEIRLNQQVESFKENPESVTISTK---QGDHLESSYALVCAGLQA 51 (252)
Q Consensus 5 a~~~G~~i~~~~~V~~i~~~~~~~~V~t~---~g~~i~A~~VV~AaG~ws 51 (252)
.+++|++++.+++|+.|+.+...+.+... ++.++.+|++|+|+|...
T Consensus 67 ~~~~~i~~~~~~~V~~id~~~~~~~~~~~~~~~~~~~~yd~lVIATGs~p 116 (437)
T 4eqs_A 67 YDRKQITVKTYHEVIAINDERQTVSVLNRKTNEQFEESYDKLILSPGASA 116 (437)
T ss_dssp HHHHCCEEEETEEEEEEETTTTEEEEEETTTTEEEEEECSEEEECCCEEE
T ss_pred HHhcCCEEEeCCeEEEEEccCcEEEEEeccCCceEEEEcCEEEECCCCcc
Confidence 45779999999999999987777666543 334689999999999864
No 239
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=84.52 E-value=1.1 Score=39.44 Aligned_cols=52 Identities=17% Similarity=0.197 Sum_probs=39.9
Q ss_pred CcEEEeCceeEEEEEcC-CeEEEEeC--CCc--EEEcCEEEEcCCCChHHH--HHHcCC
Q psy3952 9 GGEIRLNQQVESFKENP-ESVTISTK--QGD--HLESSYALVCAGLQADEM--ALKSGC 60 (252)
Q Consensus 9 G~~i~~~~~V~~i~~~~-~~~~V~t~--~g~--~i~A~~VV~AaG~ws~~l--~~~~g~ 60 (252)
.++++.+++|++++.++ +++.|.+. +|. ++.||.||+|+|...+.- ++.+|+
T Consensus 225 ~v~i~~~~~v~~i~~~~~~~v~v~~~~~~G~~~~i~~D~vi~a~G~~p~~~l~l~~~gl 283 (466)
T 3l8k_A 225 KLNIKFNSPVTEVKKIKDDEYEVIYSTKDGSKKSIFTNSVVLAAGRRPVIPEGAREIGL 283 (466)
T ss_dssp CCCEECSCCEEEEEEEETTEEEEEECCTTSCCEEEEESCEEECCCEEECCCTTTGGGTC
T ss_pred EEEEEECCEEEEEEEcCCCcEEEEEEecCCceEEEEcCEEEECcCCCcccccchhhcCc
Confidence 48999999999999877 77777765 564 699999999999875432 344454
No 240
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=83.72 E-value=1.8 Score=38.72 Aligned_cols=49 Identities=12% Similarity=0.053 Sum_probs=35.3
Q ss_pred hHHHhCCcEEEeCceeEEEEEcC----CeEEE--EeCCC---cEEEcCEEEEcCCCCh
Q psy3952 3 EEFCELGGEIRLNQQVESFKENP----ESVTI--STKQG---DHLESSYALVCAGLQA 51 (252)
Q Consensus 3 ~~a~~~G~~i~~~~~V~~i~~~~----~~~~V--~t~~g---~~i~A~~VV~AaG~ws 51 (252)
+.+++.|++++.+++|++++..+ +.+.| ...+| .++.+|.||+|+|.-.
T Consensus 258 ~~l~~~GV~v~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~D~vi~a~G~~p 315 (519)
T 3qfa_A 258 EHMEEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDA 315 (519)
T ss_dssp HHHHHTTCEEEESEEEEEEEEEECCTTCEEEEEEEESSSSCEEEEEESEEEECSCEEE
T ss_pred HHHHHCCCEEEeCCeEEEEEEccCCCCceEEEEEEECCCcEEEEEECCEEEEecCCcc
Confidence 45678899999999988887532 34444 33444 2468999999999754
No 241
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=83.33 E-value=1.2 Score=39.29 Aligned_cols=45 Identities=13% Similarity=0.150 Sum_probs=34.4
Q ss_pred HHHhCCcEEEeCceeEEEEEcCCeEEEEeCCC--cEEEcCEEEEcCCCCh
Q psy3952 4 EFCELGGEIRLNQQVESFKENPESVTISTKQG--DHLESSYALVCAGLQA 51 (252)
Q Consensus 4 ~a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g--~~i~A~~VV~AaG~ws 51 (252)
.+++.|++++.++.+. + +.+.+.|.+.+| .++.+|++|+|+|...
T Consensus 102 ~~~~~~v~~~~g~~~~-i--~~~~~~v~~~~G~~~~~~~d~lviAtG~~p 148 (468)
T 2qae_A 102 LFKKNKVTYYKGEGSF-E--TAHSIRVNGLDGKQEMLETKKTIIATGSEP 148 (468)
T ss_dssp HHHHHTCEEEEEEEEE-E--ETTEEEEEETTSCEEEEEEEEEEECCCEEE
T ss_pred HHHhCCCEEEEEEEEE-e--eCCEEEEEecCCceEEEEcCEEEECCCCCc
Confidence 3556799999887553 3 456688888777 5799999999999743
No 242
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=82.53 E-value=1.4 Score=38.78 Aligned_cols=43 Identities=19% Similarity=0.237 Sum_probs=33.8
Q ss_pred HHhCCcEEEeCceeEEEEEcCCeEEEEeCCCcE--EEcCEEEEcCCCC
Q psy3952 5 FCELGGEIRLNQQVESFKENPESVTISTKQGDH--LESSYALVCAGLQ 50 (252)
Q Consensus 5 a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g~~--i~A~~VV~AaG~w 50 (252)
+++.|++++.+ +|..+. .+.+.|.+.+|.. +.+|+||+|+|..
T Consensus 99 ~~~~~v~~~~g-~v~~id--~~~~~V~~~~g~~~~~~~d~lviAtG~~ 143 (466)
T 3l8k_A 99 SQYETLTFYKG-YVKIKD--PTHVIVKTDEGKEIEAETRYMIIASGAE 143 (466)
T ss_dssp TTCTTEEEESE-EEEEEE--TTEEEEEETTSCEEEEEEEEEEECCCEE
T ss_pred HHhCCCEEEEe-EEEEec--CCeEEEEcCCCcEEEEecCEEEECCCCC
Confidence 45679998876 677665 4568888888867 9999999999963
No 243
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=82.33 E-value=1.7 Score=38.26 Aligned_cols=45 Identities=13% Similarity=0.088 Sum_probs=33.8
Q ss_pred HHHhCCcEEEeCceeEEEEEcCCeEEEEeCC-C-cEEEcCEEEEcCCCCh
Q psy3952 4 EFCELGGEIRLNQQVESFKENPESVTISTKQ-G-DHLESSYALVCAGLQA 51 (252)
Q Consensus 4 ~a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~-g-~~i~A~~VV~AaG~ws 51 (252)
.+++.|++++.++.+ .+ +.+.+.|.+.+ | .++.+|+||+|+|...
T Consensus 106 ~~~~~gv~~~~g~~~-~~--~~~~~~v~~~~gg~~~~~~d~lViAtGs~p 152 (474)
T 1zmd_A 106 LFKQNKVVHVNGYGK-IT--GKNQVTATKADGGTQVIDTKNILIATGSEV 152 (474)
T ss_dssp HHHHTTCEEEESEEE-EE--ETTEEEEECTTSCEEEEEEEEEEECCCEEE
T ss_pred HHHhCCCEEEEEEEE-Ee--cCCEEEEEecCCCcEEEEeCEEEECCCCCC
Confidence 356789999988653 33 45678888876 4 4699999999999754
No 244
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=81.92 E-value=1.4 Score=39.30 Aligned_cols=47 Identities=15% Similarity=0.289 Sum_probs=35.2
Q ss_pred HHHhCCcEEEeCceeEEEEEc----CCeEEEEeCCCc--EEEcCEEEEcCCCCh
Q psy3952 4 EFCELGGEIRLNQQVESFKEN----PESVTISTKQGD--HLESSYALVCAGLQA 51 (252)
Q Consensus 4 ~a~~~G~~i~~~~~V~~i~~~----~~~~~V~t~~g~--~i~A~~VV~AaG~ws 51 (252)
.+++.|++++.++ ++.+... ++.+.|.+.+|. .+.+|++|+|+|...
T Consensus 104 ~~~~~gv~~~~g~-~~~i~~~~~~~~~~~~V~~~~g~~~~~~~d~lviATGs~p 156 (499)
T 1xdi_A 104 QLLSMGVQVIAGR-GELIDSTPGLARHRIKATAADGSTSEHEADVVLVATGASP 156 (499)
T ss_dssp HHHHTTCEEEESE-EEECCSSSCCSSEEEEEECTTSCEEEEEESEEEECCCEEE
T ss_pred HHHhCCCEEEEeE-EEEecCcccCCCCEEEEEeCCCcEEEEEeCEEEEcCCCCC
Confidence 3567899999886 6655542 245778887775 699999999999754
No 245
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=81.61 E-value=2.7 Score=36.91 Aligned_cols=43 Identities=14% Similarity=0.115 Sum_probs=32.2
Q ss_pred HHhC-CcEEEeCceeEEEEEcCCeEEEEeCCC--cEEEcCEEEEcCCCC
Q psy3952 5 FCEL-GGEIRLNQQVESFKENPESVTISTKQG--DHLESSYALVCAGLQ 50 (252)
Q Consensus 5 a~~~-G~~i~~~~~V~~i~~~~~~~~V~t~~g--~~i~A~~VV~AaG~w 50 (252)
.++. |++++.++ ++.++ .+.+.|.+.+| .++.+|++|+|+|..
T Consensus 104 ~~~~~~v~~~~g~-~~~~~--~~~~~v~~~~g~~~~~~~d~lviAtGs~ 149 (467)
T 1zk7_A 104 LGGNPAITVVHGE-ARFKD--DQSLTVRLNEGGERVVMFDRCLVATGAS 149 (467)
T ss_dssp HTTCTTEEEEEEE-EEEEE--TTEEEEEETTSSEEEEECSEEEECCCEE
T ss_pred HhccCCeEEEEEE-EEEcc--CCEEEEEeCCCceEEEEeCEEEEeCCCC
Confidence 3455 99988764 65554 45678888777 579999999999963
No 246
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=81.50 E-value=2.4 Score=39.84 Aligned_cols=48 Identities=13% Similarity=0.129 Sum_probs=34.9
Q ss_pred hHHHhCCcEEEeCceeEEEEEcCCeEEEE---eCCCcE------------------EEcCEEEEcCCCChH
Q psy3952 3 EEFCELGGEIRLNQQVESFKENPESVTIS---TKQGDH------------------LESSYALVCAGLQAD 52 (252)
Q Consensus 3 ~~a~~~G~~i~~~~~V~~i~~~~~~~~V~---t~~g~~------------------i~A~~VV~AaG~ws~ 52 (252)
+.+++.|++++.+++|++|+. +++++. ++.+.. +.||.||+|+|.-.+
T Consensus 579 ~~l~~~GV~i~~~~~v~~i~~--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~G~~p~ 647 (729)
T 1o94_A 579 RRLHELHVEELGDHFCSRIEP--GRMEIYNIWGDGSKRTYRGPGVSPRDANTSHRWIEFDSLVLVTGRHSE 647 (729)
T ss_dssp HHHHHTTCEEECSEEEEEEET--TEEEEEETTCSCSCCCCCCTTSCSSCCCCCCEEEECSEEEEESCEEEC
T ss_pred HHHHhCCCEEEcCcEEEEEEC--CeEEEEEecCCceEEecccccccccccCCcceeeeCCEEEECCCCCCC
Confidence 446788999999999999974 344443 222222 999999999997654
No 247
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=80.84 E-value=3.6 Score=37.40 Aligned_cols=50 Identities=10% Similarity=0.110 Sum_probs=35.5
Q ss_pred hHHHhCCcEEEeCceeEEEEEc------C---CeEEEE--eCCCcEEE--cCEEEEcCCCChH
Q psy3952 3 EEFCELGGEIRLNQQVESFKEN------P---ESVTIS--TKQGDHLE--SSYALVCAGLQAD 52 (252)
Q Consensus 3 ~~a~~~G~~i~~~~~V~~i~~~------~---~~~~V~--t~~g~~i~--A~~VV~AaG~ws~ 52 (252)
+.+++.|+++++++.+++++.. + +++.|. ..+|.++. +|.||+|+|.-.+
T Consensus 334 ~~l~~~gv~i~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~D~vi~a~G~~p~ 396 (598)
T 2x8g_A 334 DYMENHGVKFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGKKFEEEFETVIFAVGREPQ 396 (598)
T ss_dssp HHHHHTTCEEEETEEEEEEEEEECCBTTTTBCCEEEEEEEETTSCEEEEEESEEEECSCEEEC
T ss_pred HHHHhCCCEEEECCeEEEEEeccccccccCCCceEEEEEEeCCCcEEeccCCEEEEEeCCccc
Confidence 3466789999999988888642 2 445443 34564555 9999999997643
No 248
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=80.41 E-value=0.6 Score=43.85 Aligned_cols=43 Identities=12% Similarity=0.084 Sum_probs=33.0
Q ss_pred CcEEEeCceeE--EEEEcCCe-------EEE-EeCCCc--EEEcCEEEEcCCCCh
Q psy3952 9 GGEIRLNQQVE--SFKENPES-------VTI-STKQGD--HLESSYALVCAGLQA 51 (252)
Q Consensus 9 G~~i~~~~~V~--~i~~~~~~-------~~V-~t~~g~--~i~A~~VV~AaG~ws 51 (252)
|..|+.+++|+ +|.+.+++ ++| .+.+|. ++.||+||+|+-...
T Consensus 360 g~~I~l~~~V~~~~I~~~~~g~~~~~~~V~V~~~~~G~~~~~~aD~VIvTvP~~~ 414 (721)
T 3ayj_A 360 VGAGKLVVQVRQERVANACHSGTASARAQLLSYDSHNAVHSEAYDFVILAVPHDQ 414 (721)
T ss_dssp HTTTSEEEEEECEEEEEEEECSSSSCCEEEEEEETTCCEEEEEESEEEECSCHHH
T ss_pred CCceEeCCEEEeeeEEECCCCCccccceEEEEEecCCceEEEEcCEEEECCCHHH
Confidence 66778899999 99986544 888 456674 699999999876543
No 249
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=79.68 E-value=1.8 Score=37.74 Aligned_cols=47 Identities=13% Similarity=0.222 Sum_probs=34.8
Q ss_pred hHHHhCCcEEEeCceeEEEEEcCCeEEEEe--CC-----CcEEEcCEEEEcCCCCh
Q psy3952 3 EEFCELGGEIRLNQQVESFKENPESVTIST--KQ-----GDHLESSYALVCAGLQA 51 (252)
Q Consensus 3 ~~a~~~G~~i~~~~~V~~i~~~~~~~~V~t--~~-----g~~i~A~~VV~AaG~ws 51 (252)
+..+++|++++++++|++++. +++.+.. .+ +.++.+|.|++|.|.-.
T Consensus 216 ~~l~~~gI~~~~~~~v~~v~~--~~v~~~~~~~~g~~~~~~~i~~D~vv~~~g~~~ 269 (437)
T 3sx6_A 216 KGLKEEGIEAYTNCKVTKVED--NKMYVTQVDEKGETIKEMVLPVKFGMMIPAFKG 269 (437)
T ss_dssp HHHHHTTCEEECSEEEEEEET--TEEEEEEECTTSCEEEEEEEECSEEEEECCEEC
T ss_pred HHHHHCCCEEEcCCEEEEEEC--CeEEEEecccCCccccceEEEEeEEEEcCCCcC
Confidence 456788999999999999863 4444432 22 44799999999998543
No 250
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=78.94 E-value=1.5 Score=38.50 Aligned_cols=44 Identities=20% Similarity=0.259 Sum_probs=32.4
Q ss_pred HHHhCCcEEEeCceeEEEEEcCCeEEEEeCCCcEEEcCEEEEcCCCCh
Q psy3952 4 EFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQA 51 (252)
Q Consensus 4 ~a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g~~i~A~~VV~AaG~ws 51 (252)
.+++.|++++.++.+. .+.+.+.|.+ +|.++.+|+||+|+|...
T Consensus 98 ~~~~~~v~~~~g~~~~---i~~~~~~v~~-~g~~~~~d~lviAtG~~p 141 (455)
T 2yqu_A 98 LFKKNGIARHQGTARF---LSERKVLVEE-TGEELEARYILIATGSAP 141 (455)
T ss_dssp HHHHHTCEEEESCEEE---SSSSEEEETT-TCCEEEEEEEEECCCEEE
T ss_pred HHHhCCCEEEEeEEEE---ecCCeEEEee-CCEEEEecEEEECCCCCC
Confidence 3556799999887543 2445677766 565899999999999743
No 251
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=78.53 E-value=0.25 Score=42.35 Aligned_cols=40 Identities=13% Similarity=0.169 Sum_probs=32.4
Q ss_pred hhHHHhCCcEEEeCceeEEEEEcCCeEEEEeCCCcEEEcCEEEEcCCCChH
Q psy3952 2 GEEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQAD 52 (252)
Q Consensus 2 ~~~a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g~~i~A~~VV~AaG~ws~ 52 (252)
.+.+++.|++++++++|++++.. . +++||.||.|.|.+|.
T Consensus 105 ~~~~~~~gv~i~~~~~v~~i~~~----------~-~~~ad~vV~AdG~~S~ 144 (381)
T 3c4a_A 105 RDKCRSQGIAIRFESPLLEHGEL----------P-LADYDLVVLANGVNHK 144 (381)
T ss_dssp HHHHHHTTCEEETTCCCCSGGGC----------C-GGGCSEEEECCGGGGG
T ss_pred HHHHHHCCCEEEeCCEeccchhc----------c-cccCCEEEECCCCCch
Confidence 45677789999999999987531 1 3689999999999996
No 252
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=78.32 E-value=2.2 Score=37.74 Aligned_cols=44 Identities=11% Similarity=0.107 Sum_probs=33.1
Q ss_pred HHhCCcEEEeCceeEEEEEcCCeEEEEeCCCc--EEEcCEEEEcCCCCh
Q psy3952 5 FCELGGEIRLNQQVESFKENPESVTISTKQGD--HLESSYALVCAGLQA 51 (252)
Q Consensus 5 a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g~--~i~A~~VV~AaG~ws 51 (252)
+++.|++++.++ ++.+ +.+.+.|.+.+|. ++.+|++|+|+|...
T Consensus 115 ~~~~gv~~~~g~-~~~i--~~~~~~v~~~~g~~~~~~~d~lviAtGs~p 160 (479)
T 2hqm_A 115 LEKEKVDVVFGW-ARFN--KDGNVEVQKRDNTTEVYSANHILVATGGKA 160 (479)
T ss_dssp HHHTTEEEEEEE-EEEC--TTSCEEEEESSSCCEEEEEEEEEECCCEEE
T ss_pred HHhCCCEEEEeE-EEEe--eCCEEEEEeCCCcEEEEEeCEEEEcCCCCC
Confidence 456899998874 5544 4455778887775 699999999999753
No 253
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=77.27 E-value=3.1 Score=37.25 Aligned_cols=48 Identities=21% Similarity=0.201 Sum_probs=35.2
Q ss_pred HHHh-CCcEEEeCceeEEEEEcCCeE-EEEe---CCC--cEEEcCEEEEcCCCCh
Q psy3952 4 EFCE-LGGEIRLNQQVESFKENPESV-TIST---KQG--DHLESSYALVCAGLQA 51 (252)
Q Consensus 4 ~a~~-~G~~i~~~~~V~~i~~~~~~~-~V~t---~~g--~~i~A~~VV~AaG~ws 51 (252)
.+++ .|++++.+++|+++..+++++ .|.. .+| .++.+|.||+|+|.-.
T Consensus 399 ~l~~~~gV~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p 453 (521)
T 1hyu_A 399 KVRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHSVALAGIFVQIGLLP 453 (521)
T ss_dssp HHTTCTTEEEECSEEEEEEEECSSSEEEEEEEETTTCCEEEEECSEEEECCCEEE
T ss_pred HHhcCCCcEEEeCCEEEEEEcCCCcEEEEEEEeCCCCceEEEEcCEEEECcCCCC
Confidence 3445 599999999999998766654 3432 234 3689999999999643
No 254
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=76.91 E-value=1.6 Score=39.34 Aligned_cols=48 Identities=17% Similarity=0.222 Sum_probs=33.5
Q ss_pred hHHHhCCcEEE--eCceeEEEEEcCCeEEEEeCCCcEEEcCEEEEcCCCChH-HHH
Q psy3952 3 EEFCELGGEIR--LNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQAD-EMA 55 (252)
Q Consensus 3 ~~a~~~G~~i~--~~~~V~~i~~~~~~~~V~t~~g~~i~A~~VV~AaG~ws~-~l~ 55 (252)
++..+.+++++ .++.|++|.. ++ |.+.+ .++.+|.||.|+|..+. .++
T Consensus 346 ~~~~~~~v~lv~~~~~~i~~i~~--~g--v~~~d-~~~~~D~ii~atG~~~~~~~~ 396 (542)
T 1w4x_A 346 EMFNRDNVHLVDTLSAPIETITP--RG--VRTSE-REYELDSLVLATGFDALTGAL 396 (542)
T ss_dssp HHTTSTTEEEEETTTSCEEEECS--SE--EEESS-CEEECSEEEECCCCCCTTHHH
T ss_pred HHhCCCCEEEEecCCCCceEEcC--Ce--EEeCC-eEEecCEEEEcCCccccccCc
Confidence 34455577776 3667888753 33 55655 59999999999999973 443
No 255
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=76.82 E-value=1.1 Score=40.05 Aligned_cols=45 Identities=9% Similarity=0.124 Sum_probs=35.5
Q ss_pred hCCcEEEeCceeEEEEEcCCeEEEEe-CCCc--EEEcCEEEEcCCCCh
Q psy3952 7 ELGGEIRLNQQVESFKENPESVTIST-KQGD--HLESSYALVCAGLQA 51 (252)
Q Consensus 7 ~~G~~i~~~~~V~~i~~~~~~~~V~t-~~g~--~i~A~~VV~AaG~ws 51 (252)
+.|++++.+++|.++..++..+.+.+ +++. .+.+|++|+|+|...
T Consensus 172 ~~~v~~~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~d~lvlAtGa~~ 219 (493)
T 1y56_A 172 NENTKIYLETSALGVFDKGEYFLVPVVRGDKLIEILAKRVVLATGAID 219 (493)
T ss_dssp CTTEEEETTEEECCCEECSSSEEEEEEETTEEEEEEESCEEECCCEEE
T ss_pred hcCCEEEcCCEEEEEEcCCcEEEEEEecCCeEEEEECCEEEECCCCCc
Confidence 45999999999999988777666543 4442 589999999999864
No 256
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=76.24 E-value=3.5 Score=40.08 Aligned_cols=57 Identities=11% Similarity=0.178 Sum_probs=39.8
Q ss_pred hHHHhCCcEEEeCceeEEEEEc-CCe---EEEEe--C---CC--cEEEcCEEEEcCCCChH-HHHHHcC
Q psy3952 3 EEFCELGGEIRLNQQVESFKEN-PES---VTIST--K---QG--DHLESSYALVCAGLQAD-EMALKSG 59 (252)
Q Consensus 3 ~~a~~~G~~i~~~~~V~~i~~~-~~~---~~V~t--~---~g--~~i~A~~VV~AaG~ws~-~l~~~~g 59 (252)
+.+++.|+++++++.|++++.+ +++ +++.. . +| .++.||.||+|+|.-.+ .++...+
T Consensus 324 ~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G~~P~~~l~~~~~ 392 (965)
T 2gag_A 324 AQAVADGVQVISGSVVVDTEADENGELSAIVVAELDEARELGGTQRFEADVLAVAGGFNPVVHLHSQRQ 392 (965)
T ss_dssp HHHHHTTCCEEETEEEEEEEECTTSCEEEEEEEEECTTCCEEEEEEEECSEEEEECCEEECCHHHHHTT
T ss_pred HHHHhCCeEEEeCCEeEEEeccCCCCEEEEEEEeccccCCCCceEEEEcCEEEECCCcCcChHHHHhCC
Confidence 4567899999999999999874 343 33333 1 23 47999999999997542 3554443
No 257
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=75.54 E-value=1.8 Score=35.47 Aligned_cols=57 Identities=9% Similarity=0.240 Sum_probs=41.8
Q ss_pred hHHHhCCcEEEeCceeEEEEEcCCeE-EEEeCCCcEEEcCEEEEcCCCCh-HHHHHHcCC
Q psy3952 3 EEFCELGGEIRLNQQVESFKENPESV-TISTKQGDHLESSYALVCAGLQA-DEMALKSGC 60 (252)
Q Consensus 3 ~~a~~~G~~i~~~~~V~~i~~~~~~~-~V~t~~g~~i~A~~VV~AaG~ws-~~l~~~~g~ 60 (252)
+.+++.|+.++++ .|+.+..+++.+ .|++.+|.++.++.+|+++|.-. ..+++.+|+
T Consensus 188 ~~l~~~g~~~~~~-~v~~~~~~~~~~~~v~~~~g~~i~~~~~vi~~g~~~~~~~~~~~g~ 246 (304)
T 4fk1_A 188 DELSNKNIPVITE-SIRTLQGEGGYLKKVEFHSGLRIERAGGFIVPTFFRPNQFIEQLGC 246 (304)
T ss_dssp HHHHTTTCCEECS-CEEEEESGGGCCCEEEETTSCEECCCEEEECCEEECSSCHHHHTTC
T ss_pred hhhhccceeEeee-eEEEeecCCCeeeeeeccccceeeecceeeeeccccCChhhhhcCe
Confidence 4567789999876 477777666654 48888887899999999887643 345666665
No 258
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=75.31 E-value=4.3 Score=35.88 Aligned_cols=43 Identities=14% Similarity=0.156 Sum_probs=32.4
Q ss_pred HHhCCcEEEeCceeEEEEEcCCeEEEEeCCC--cEEEcCEEEEcCCCC
Q psy3952 5 FCELGGEIRLNQQVESFKENPESVTISTKQG--DHLESSYALVCAGLQ 50 (252)
Q Consensus 5 a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g--~~i~A~~VV~AaG~w 50 (252)
.++.|++++.+..+. .+.+.+.|.+.+| .++.+|+||+|+|..
T Consensus 125 ~~~~~v~~~~g~~~~---~~~~~~~v~~~~g~~~~~~~d~lViATGs~ 169 (491)
T 3urh_A 125 FKKNKIDGFQGTGKV---LGQGKVSVTNEKGEEQVLEAKNVVIATGSD 169 (491)
T ss_dssp HHHTTCEEEESEEEE---CSSSEEEEECTTSCEEEEECSEEEECCCEE
T ss_pred HHhCCCEEEEEEEEE---ecCCEEEEEeCCCceEEEEeCEEEEccCCC
Confidence 456799988876433 3456688888776 479999999999965
No 259
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=73.53 E-value=6.6 Score=38.42 Aligned_cols=55 Identities=13% Similarity=0.010 Sum_probs=39.2
Q ss_pred hHHHhCCcEEEeCceeEEEEEcCCeEE-EEeC------CC---------cEEEcCEEEEcCCCC--hHHHHHH
Q psy3952 3 EEFCELGGEIRLNQQVESFKENPESVT-ISTK------QG---------DHLESSYALVCAGLQ--ADEMALK 57 (252)
Q Consensus 3 ~~a~~~G~~i~~~~~V~~i~~~~~~~~-V~t~------~g---------~~i~A~~VV~AaG~w--s~~l~~~ 57 (252)
+.+++.|++++.++.++++..++++++ |+.. +| .++.||.||+|.|.- ...|+..
T Consensus 378 ~~~~~~Gv~~~~~~~~~~i~~~~g~v~~v~~~~~~~~~~g~~~~~~g~~~~i~aD~Vi~A~G~~~~~~~l~~~ 450 (1025)
T 1gte_A 378 ELAKEEKCEFLPFLSPRKVIVKGGRIVAVQFVRTEQDETGKWNEDEDQIVHLKADVVISAFGSVLRDPKVKEA 450 (1025)
T ss_dssp HHHHHTTCEEECSEEEEEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEECSEEEECSCEECCCHHHHHH
T ss_pred HHHHHcCCEEEeCCCceEEEccCCeEEEEEEEEeEEcCCCCcccCCCceEEEECCEEEECCCCCCCchhhhhc
Confidence 357788999999999999987655543 3221 12 368999999999983 3556554
No 260
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=72.86 E-value=3.3 Score=36.39 Aligned_cols=44 Identities=11% Similarity=0.169 Sum_probs=33.1
Q ss_pred HHhCCcEEEeCceeEEEEEcCCeEEEEeCCC--cEEEcCEEEEcCCCCh
Q psy3952 5 FCELGGEIRLNQQVESFKENPESVTISTKQG--DHLESSYALVCAGLQA 51 (252)
Q Consensus 5 a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g--~~i~A~~VV~AaG~ws 51 (252)
.++.|++++.++.+. .+.+.+.|.+.+| ..+.+|+||+|+|...
T Consensus 109 ~~~~~v~~~~g~~~~---~~~~~~~v~~~~g~~~~~~~d~lvlAtG~~p 154 (476)
T 3lad_A 109 IKANGVTLFEGHGKL---LAGKKVEVTAADGSSQVLDTENVILASGSKP 154 (476)
T ss_dssp HHHHTCEEEESEEEE---CSTTCEEEECTTSCEEEECCSCEEECCCEEE
T ss_pred HHhCCCEEEEeEEEE---ecCCEEEEEcCCCceEEEEcCEEEEcCCCCC
Confidence 456799998876443 3456688888777 4799999999999753
No 261
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=70.13 E-value=3.6 Score=36.16 Aligned_cols=41 Identities=12% Similarity=0.202 Sum_probs=29.5
Q ss_pred HHhCCcEEEeCceeEEEEEcCCeEEEEeCCCcEEEcCEEEEcCCCCh
Q psy3952 5 FCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQA 51 (252)
Q Consensus 5 a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g~~i~A~~VV~AaG~ws 51 (252)
+++.|++++.++.+. + +... |.+. |.++.+|+||+|+|.+.
T Consensus 103 ~~~~gv~~~~g~~~~-~--~~~~--v~v~-g~~~~~d~lViATGs~p 143 (464)
T 2eq6_A 103 LKGNGVELLRGFARL-V--GPKE--VEVG-GERYGAKSLILATGSEP 143 (464)
T ss_dssp HHHTTCEEEESCEEE-E--ETTE--EEET-TEEEEEEEEEECCCEEE
T ss_pred HHhCCCEEEeeeEEE-c--cCCE--EEEc-cEEEEeCEEEEcCCCCC
Confidence 567899999987654 3 2333 4444 44799999999999864
No 262
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=69.62 E-value=2.2 Score=37.65 Aligned_cols=57 Identities=12% Similarity=0.115 Sum_probs=38.1
Q ss_pred hHHHhCCcEEEeCceeEEEEEcCCeE---EEE------------------eCCCcEEEcCEEEEcCCCChHH---HHHHc
Q psy3952 3 EEFCELGGEIRLNQQVESFKENPESV---TIS------------------TKQGDHLESSYALVCAGLQADE---MALKS 58 (252)
Q Consensus 3 ~~a~~~G~~i~~~~~V~~i~~~~~~~---~V~------------------t~~g~~i~A~~VV~AaG~ws~~---l~~~~ 58 (252)
+.+++.|+++++++.+++|..+ +++ .+. +++..++.||.||+|.|.-.+. +++.+
T Consensus 310 ~~~~~~Gv~~~~~~~~~~i~~~-g~v~~v~~~~~~~~~~d~~G~~~~~~~~g~~~~i~aD~Vi~A~G~~p~~~~~~l~~~ 388 (456)
T 2vdc_G 310 AHAEEEGVEFIWQAAPEGFTGD-TVVTGVRAVRIHLGVADATGRQTPQVIEGSEFTVQADLVIKALGFEPEDLPNAFDEP 388 (456)
T ss_dssp HHHHHTTCEEECCSSSCCEEEE-EEEETTEEEEEEEEEEEECTTCCEEEEEEEEEEEECSEEEECSCEECCCHHHHHHST
T ss_pred HHHHHCCCEEEeCCCceEEeCC-CcEEEEEEEEEEecccCCcCCccccccCCcEEEEECCEEEECCCCCCCcchhhcccC
Confidence 4577889999999998888753 222 221 1112369999999999986532 45545
Q ss_pred CC
Q psy3952 59 GC 60 (252)
Q Consensus 59 g~ 60 (252)
|+
T Consensus 389 gl 390 (456)
T 2vdc_G 389 EL 390 (456)
T ss_dssp TS
T ss_pred Ce
Confidence 54
No 263
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=69.32 E-value=4.7 Score=35.53 Aligned_cols=46 Identities=13% Similarity=0.222 Sum_probs=33.8
Q ss_pred CCcEEEeCceeEEEEEcC-C-e---EEEE---------------eCCCcEEEcCEEEEcCCCChHH
Q psy3952 8 LGGEIRLNQQVESFKENP-E-S---VTIS---------------TKQGDHLESSYALVCAGLQADE 53 (252)
Q Consensus 8 ~G~~i~~~~~V~~i~~~~-~-~---~~V~---------------t~~g~~i~A~~VV~AaG~ws~~ 53 (252)
.|+++++++.+++|..++ + + +++. ++++.++.||.||.|+|.-.+.
T Consensus 270 ~gv~~~~~~~~~~i~~~~~~~~v~~v~~~~~~l~~~~~~~~~~~~g~~~~i~~d~Vi~a~G~~p~~ 335 (460)
T 1cjc_A 270 RAWGLRFFRSPQQVLPSPDGRRAAGIRLAVTRLEGIGEATRAVPTGDVEDLPCGLVLSSIGYKSRP 335 (460)
T ss_dssp EEEEEECSEEEEEEEECTTSSSEEEEEEEEEEEESSGGGCEEEEEEEEEEEECSEEEECCCEECCC
T ss_pred ceEEEECCCChheEEcCCCCceEEEEEEEEEEEccccCCCcccCCCceEEEEcCEEEECCCCCCCC
Confidence 799999999999998763 3 3 2222 2222479999999999987654
No 264
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=67.04 E-value=6.9 Score=34.86 Aligned_cols=44 Identities=14% Similarity=0.210 Sum_probs=32.9
Q ss_pred hCCcEEEeCceeEEEEEcCCeEEEEe------------------CCCcEEEcCEEEEcCCCCh
Q psy3952 7 ELGGEIRLNQQVESFKENPESVTIST------------------KQGDHLESSYALVCAGLQA 51 (252)
Q Consensus 7 ~~G~~i~~~~~V~~i~~~~~~~~V~t------------------~~g~~i~A~~VV~AaG~ws 51 (252)
+.+++++. .+|++|+.+...+.+.+ .++.++..|++|+|+|.-.
T Consensus 108 ~~~v~~~~-~~v~~ID~~~k~V~l~~~~~~~~~~~~~~~~~~~~~~~~~i~YD~LViAtGs~~ 169 (502)
T 4g6h_A 108 KGNVTYYE-AEATSINPDRNTVTIKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLISAVGAEP 169 (502)
T ss_dssp SSCEEEEE-EEEEEEEGGGTEEEEEEEEEEEECSSSCCCCCCCTTCCEEEECSEEEECCCCEE
T ss_pred cCCeEEEE-EEEEEEEhhhCEEEEeecccceeecccccccccccCCceEEeCCEEEEcCCccc
Confidence 45788776 48999988877766542 2344799999999999854
No 265
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=62.99 E-value=4.1 Score=33.63 Aligned_cols=48 Identities=10% Similarity=0.131 Sum_probs=31.9
Q ss_pred hCCcEEEeCceeEEEEEcCCeEEEEeCCCcEEEcCEEEEcCCCChH-HHHHHcC
Q psy3952 7 ELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQAD-EMALKSG 59 (252)
Q Consensus 7 ~~G~~i~~~~~V~~i~~~~~~~~V~t~~g~~i~A~~VV~AaG~ws~-~l~~~~g 59 (252)
+.|. +.....|.+++.. .|.+.+|.++.+|.||.|+|.-.+ .+++.+|
T Consensus 246 ~~g~-i~~~~~v~~~~~~----~v~~~~g~~i~~D~vi~a~G~~p~~~~l~~~g 294 (357)
T 4a9w_A 246 ARGV-LAAVPPPARFSPT----GMQWADGTERAFDAVIWCTGFRPALSHLKGLD 294 (357)
T ss_dssp HTTC-CCEECCCSEEETT----EEECTTSCEEECSEEEECCCBCCCCGGGTTTT
T ss_pred hcCc-eEEecCcceEeCC----eeEECCCCEecCCEEEECCCcCCCCcccCccc
Confidence 4444 4555666666432 267777878999999999998765 4444344
No 266
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=62.69 E-value=11 Score=33.33 Aligned_cols=43 Identities=16% Similarity=0.267 Sum_probs=31.1
Q ss_pred HHhC-CcEEEeCceeEEEEEcCCeEEEEe---CCC---cEEEcCEEEEcCCCC
Q psy3952 5 FCEL-GGEIRLNQQVESFKENPESVTIST---KQG---DHLESSYALVCAGLQ 50 (252)
Q Consensus 5 a~~~-G~~i~~~~~V~~i~~~~~~~~V~t---~~g---~~i~A~~VV~AaG~w 50 (252)
.+++ |++++.++ ++.+. ...+.|.+ .+| ..+.+|++|+|+|..
T Consensus 113 l~~~~gv~~~~g~-~~~i~--~~~v~v~~~~~~~g~~~~~~~~d~lviAtGs~ 162 (490)
T 1fec_A 113 FADTEGLTFHQGF-GALQD--NHTVLVRESADPNSAVLETLDTEYILLATGSW 162 (490)
T ss_dssp HHTSTTEEEEESE-EEEEE--TTEEEEESSSSTTSCEEEEEEEEEEEECCCEE
T ss_pred HhcCCCcEEEEeE-EEEee--CCEEEEEeeccCCCCceEEEEcCEEEEeCCCC
Confidence 4567 99999886 55553 34566664 245 479999999999964
No 267
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=62.51 E-value=13 Score=32.69 Aligned_cols=43 Identities=9% Similarity=0.105 Sum_probs=30.8
Q ss_pred HHhCCcEEEeCceeEEEEEcCCeEEEEeCCCc-EEEcCEEEEcCCCC
Q psy3952 5 FCELGGEIRLNQQVESFKENPESVTISTKQGD-HLESSYALVCAGLQ 50 (252)
Q Consensus 5 a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g~-~i~A~~VV~AaG~w 50 (252)
.++.|++++.+.. .-+ +.+.+.|.+.+|. ++.+|+||+|+|..
T Consensus 118 ~~~~~v~~~~g~a-~~~--~~~~v~v~~~~g~~~~~~d~lviATGs~ 161 (483)
T 3dgh_A 118 LRDKKVEYINGLG-SFV--DSHTLLAKLKSGERTITAQTFVIAVGGR 161 (483)
T ss_dssp HHHTTCEEECSEE-EEE--ETTEEEEECTTCCEEEEEEEEEECCCEE
T ss_pred HHhCCCEEEEeEE-EEc--cCCEEEEEeCCCeEEEEcCEEEEeCCCC
Confidence 4567898887643 222 3456778887773 69999999999964
No 268
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=60.74 E-value=12 Score=33.27 Aligned_cols=43 Identities=12% Similarity=0.134 Sum_probs=31.1
Q ss_pred HHhCCcEEEeCceeEEEEEcCCeEEEEeCCCc--EEEcCEEEEcCCCC
Q psy3952 5 FCELGGEIRLNQQVESFKENPESVTISTKQGD--HLESSYALVCAGLQ 50 (252)
Q Consensus 5 a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g~--~i~A~~VV~AaG~w 50 (252)
.+..|++++.+. +..+ +...+.|.+.+|. ++.+|+||+|+|..
T Consensus 140 ~~~~gV~~i~g~-a~~~--d~~~v~v~~~~g~~~~i~~d~lViATGs~ 184 (519)
T 3qfa_A 140 LREKKVVYENAY-GQFI--GPHRIKATNNKGKEKIYSAERFLIATGER 184 (519)
T ss_dssp HHHTTCEEECSE-EEEE--ETTEEEEECTTCCCCEEEEEEEEECCCEE
T ss_pred HHhCCCEEEEEE-EEEe--eCCEEEEEcCCCCEEEEECCEEEEECCCC
Confidence 456799988764 4433 3456778877663 69999999999964
No 269
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=60.43 E-value=6.8 Score=34.40 Aligned_cols=46 Identities=11% Similarity=0.166 Sum_probs=33.2
Q ss_pred CCcEEEeCceeEEEEEcCC--eEEEEe--------------CCC--cEEEcCEEEEcCCCChHH
Q psy3952 8 LGGEIRLNQQVESFKENPE--SVTIST--------------KQG--DHLESSYALVCAGLQADE 53 (252)
Q Consensus 8 ~G~~i~~~~~V~~i~~~~~--~~~V~t--------------~~g--~~i~A~~VV~AaG~ws~~ 53 (252)
.|+++++++.+++|..++. ++++.. .+| .++.||.||.|.|.-...
T Consensus 265 ~gv~i~~~~~~~~i~~~~~v~~v~~~~~~~~~~~~~~~~~~~~g~~~~i~~d~vi~a~G~~p~~ 328 (456)
T 1lqt_A 265 RRMVFRFLTSPIEIKGKRKVERIVLGRNELVSDGSGRVAAKDTGEREELPAQLVVRSVGYRGVP 328 (456)
T ss_dssp EEEEEECSEEEEEEECSSSCCEEEEEEEEEEECSSSSEEEEEEEEEEEEECSEEEECSCEECCC
T ss_pred ceEEEEeCCCCeEEecCCcEeEEEEEEEEecCCCcccccccCCCceEEEEcCEEEEccccccCC
Confidence 7999999999999976532 233321 123 369999999999987654
No 270
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=59.19 E-value=11 Score=33.28 Aligned_cols=43 Identities=12% Similarity=0.039 Sum_probs=30.4
Q ss_pred HHhCCcEEEeCceeEEEEEcCCeEEEEeCCC--cEEEcCEEEEcCCCC
Q psy3952 5 FCELGGEIRLNQQVESFKENPESVTISTKQG--DHLESSYALVCAGLQ 50 (252)
Q Consensus 5 a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g--~~i~A~~VV~AaG~w 50 (252)
.++.|++++.+. +.. .+...+.|.+.+| .++.+|+||+|+|..
T Consensus 114 ~~~~~V~~i~g~-~~~--~~~~~v~v~~~~g~~~~~~~d~lViATGs~ 158 (488)
T 3dgz_A 114 LQDRKVKYFNIK-ASF--VDEHTVRGVDKGGKATLLSAEHIVIATGGR 158 (488)
T ss_dssp HHHTTCEEECCE-EEE--SSSSEEEEECTTSCEEEEEEEEEEECCCEE
T ss_pred HHhCCCEEEEEE-EEE--ccCCeEEEEeCCCceEEEECCEEEEcCCCC
Confidence 456788887653 332 2345577887776 479999999999963
No 271
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=56.13 E-value=0.88 Score=39.22 Aligned_cols=45 Identities=22% Similarity=0.412 Sum_probs=33.0
Q ss_pred hHHHhCCcEEEeCceeEEEEEcCCeEEEEeCCCcEEEcCEEEEcCCCChH-HHHHHcCC
Q psy3952 3 EEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQAD-EMALKSGC 60 (252)
Q Consensus 3 ~~a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g~~i~A~~VV~AaG~ws~-~l~~~~g~ 60 (252)
+..++.|++++.+++|+++ |.++.||.||+|+|...+ .+++.+|+
T Consensus 196 ~~l~~~gV~~~~~~~v~~i-------------g~~~~~D~vv~a~G~~p~~~~~~~~gl 241 (385)
T 3klj_A 196 DKLDRLGIKIYTNSNFEEM-------------GDLIRSSCVITAVGVKPNLDFIKDTEI 241 (385)
T ss_dssp HHHHTTTCEEECSCCGGGC-------------HHHHHHSEEEECCCEEECCGGGTTSCC
T ss_pred HHHHhCCCEEEeCCEEEEc-------------CeEEecCeEEECcCcccChhhhhhcCC
Confidence 3456778888888877766 447899999999998764 45555554
No 272
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=55.33 E-value=14 Score=32.41 Aligned_cols=43 Identities=14% Similarity=0.052 Sum_probs=29.5
Q ss_pred HHHhCCcEEEeCceeEEEEEcCCeEEEEeCCCcEEEcCEEEEcCCCC
Q psy3952 4 EFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQ 50 (252)
Q Consensus 4 ~a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g~~i~A~~VV~AaG~w 50 (252)
.+++.|++++.++ +..+ +...+.|.++.. ++.+|+||+|+|..
T Consensus 117 ~~~~~gv~~~~g~-~~~~--~~~~~~v~~~g~-~~~~d~lviAtG~~ 159 (478)
T 3dk9_A 117 NLTKSHIEIIRGH-AAFT--SDPKPTIEVSGK-KYTAPHILIATGGM 159 (478)
T ss_dssp HHHHTTCEEEESC-EEEC--SCSSCEEEETTE-EEECSCEEECCCEE
T ss_pred HHHhCCcEEEEeE-EEEe--eCCeEEEEECCE-EEEeeEEEEccCCC
Confidence 3566799988875 3322 233356665544 89999999999964
No 273
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=54.92 E-value=5.4 Score=35.39 Aligned_cols=44 Identities=11% Similarity=0.126 Sum_probs=22.8
Q ss_pred HHhCCcEEEeCceeEEEEEcCCeEEEEe-----------CCCcEEEcCEEEEcCCCCh
Q psy3952 5 FCELGGEIRLNQQVESFKENPESVTIST-----------KQGDHLESSYALVCAGLQA 51 (252)
Q Consensus 5 a~~~G~~i~~~~~V~~i~~~~~~~~V~t-----------~~g~~i~A~~VV~AaG~ws 51 (252)
+++.|++++.++.+ .++ ...+.|.+ +++.++.+|+||+|+|...
T Consensus 99 ~~~~gv~~~~g~~~-~id--~~~v~v~~~~~~~~~~~~~~~~~~~~~d~lViAtGs~p 153 (500)
T 1onf_A 99 LSKDKVDLYEGTAS-FLS--ENRILIKGTKDNNNKDNGPLNEEILEGRNILIAVGNKP 153 (500)
T ss_dssp HHHTTCEEEESCCC-CC----------------------------CBSSEEECCCCCB
T ss_pred HHhCCCEEEEeEEE-Eee--CCEEEEEeccccccccccCCCceEEEeCEEEECCCCCC
Confidence 46789999988643 332 23354533 2244799999999999854
No 274
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=54.77 E-value=25 Score=28.48 Aligned_cols=45 Identities=9% Similarity=0.088 Sum_probs=29.3
Q ss_pred HHhCCcEEEeCceeEEEEEcCCeEEEEeCCCcEEEcCEEEEcCCCCh
Q psy3952 5 FCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQA 51 (252)
Q Consensus 5 a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g~~i~A~~VV~AaG~ws 51 (252)
..+.+..+.....+....... ...+.++.. ++++|++|+|+|...
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~d~liiAtGs~~ 116 (312)
T 4gcm_A 72 AKKFGAVYQYGDIKSVEDKGE-YKVINFGNK-ELTAKAVIIATGAEY 116 (312)
T ss_dssp HHHTTCEEEECCCCEEEECSS-CEEEECSSC-EEEEEEEEECCCEEE
T ss_pred Hhhccccccceeeeeeeeeec-ceeeccCCe-EEEeceeEEcccCcc
Confidence 445677777766655544332 333455544 899999999999743
No 275
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=53.79 E-value=12 Score=33.31 Aligned_cols=40 Identities=18% Similarity=0.252 Sum_probs=29.9
Q ss_pred HhCCcEEEeCceeEEEEEcCCeEEEEeCCCcEEEcCEEEEcCCCC
Q psy3952 6 CELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQ 50 (252)
Q Consensus 6 ~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g~~i~A~~VV~AaG~w 50 (252)
++.|++++.+.+|+.+.. . .|.+. |..+.+|++|+|+|..
T Consensus 146 ~~~gv~~~~~~~v~~i~~--~--~v~~~-g~~~~~d~lViATGs~ 185 (523)
T 1mo9_A 146 EQLNLEYILNCPAKVIDN--H--TVEAA-GKVFKAKNLILAVGAG 185 (523)
T ss_dssp HTSCCCEEESSCCEEEET--T--EEEET-TEEEEBSCEEECCCEE
T ss_pred ccCCcEEEEeeEEEEeeC--C--EEEEC-CEEEEeCEEEECCCCC
Confidence 678999986678887753 3 34444 5479999999999964
No 276
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=53.34 E-value=16 Score=31.92 Aligned_cols=42 Identities=7% Similarity=0.110 Sum_probs=30.3
Q ss_pred HHHhCCcEEEeCceeEEEEEcCCeEEEEeCCCcEEEcCEEEEcCCCCh
Q psy3952 4 EFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQA 51 (252)
Q Consensus 4 ~a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g~~i~A~~VV~AaG~ws 51 (252)
.++++|++++.++.+. + +.. +|.+.+. ++.+|++|+|+|...
T Consensus 105 ~~~~~gv~~~~g~~~~-~--~~~--~v~v~~~-~~~~d~lviATGs~p 146 (458)
T 1lvl_A 105 LLKKHGVKVVHGWAKV-L--DGK--QVEVDGQ-RIQCEHLLLATGSSS 146 (458)
T ss_dssp HHHHTTCEEECSCEEE-E--ETT--EEEETTE-EEECSEEEECCCEEE
T ss_pred HHHhCCcEEEEEEEEE-c--cCC--EEEEeeE-EEEeCEEEEeCCCCC
Confidence 3567899999887654 3 233 4555444 899999999999854
No 277
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=49.93 E-value=18 Score=31.56 Aligned_cols=41 Identities=17% Similarity=0.205 Sum_probs=28.7
Q ss_pred HHhCCcEEEeCceeEEEEEcCCeEEEEeCCCcEEEcCEEEEcCCCCh
Q psy3952 5 FCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQA 51 (252)
Q Consensus 5 a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g~~i~A~~VV~AaG~ws 51 (252)
+++.|++++.++ +..+. .. .|.+ +|.++.+|++|+|+|.+.
T Consensus 102 ~~~~gv~~~~g~-~~~i~--~~--~v~~-~g~~~~~d~lviAtGs~p 142 (463)
T 2r9z_A 102 VERLGITRVDGH-ARFVD--AH--TIEV-EGQRLSADHIVIATGGRP 142 (463)
T ss_dssp HHHTTCEEEESC-EEEEE--TT--EEEE-TTEEEEEEEEEECCCEEE
T ss_pred HHHCCCEEEEeE-EEEcc--CC--EEEE-CCEEEEcCEEEECCCCCC
Confidence 467899999875 44443 22 3445 454799999999999753
No 278
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=49.81 E-value=15 Score=32.18 Aligned_cols=38 Identities=13% Similarity=0.220 Sum_probs=26.4
Q ss_pred CcEEEeCceeEEEEEcCCeEEEEeCCCcEEEcCEEEEcCCCChH
Q psy3952 9 GGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQAD 52 (252)
Q Consensus 9 G~~i~~~~~V~~i~~~~~~~~V~t~~g~~i~A~~VV~AaG~ws~ 52 (252)
|++++ ..|++++ +++ |...+|.++.+|.||.|+|.-.+
T Consensus 240 ~V~~~--~~V~~i~--~~~--V~~~dG~~i~~D~Vi~atG~~p~ 277 (464)
T 2xve_A 240 NWDER--PNLVRVD--TEN--AYFADGSSEKVDAIILCTGYIHH 277 (464)
T ss_dssp TEEEC--SCEEEEC--SSE--EEETTSCEEECSEEEECCCBCCC
T ss_pred ceEEc--CCeEEEe--CCE--EEECCCCEEeCCEEEECCCCCCC
Confidence 45544 5666664 333 55667768999999999997643
No 279
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=49.37 E-value=11 Score=33.27 Aligned_cols=43 Identities=16% Similarity=0.182 Sum_probs=29.1
Q ss_pred HHhC-CcEEEeCceeEEEEEcCCeEEEEe-CC-----CcEEEcCEEEEcCCCC
Q psy3952 5 FCEL-GGEIRLNQQVESFKENPESVTIST-KQ-----GDHLESSYALVCAGLQ 50 (252)
Q Consensus 5 a~~~-G~~i~~~~~V~~i~~~~~~~~V~t-~~-----g~~i~A~~VV~AaG~w 50 (252)
++++ |++++.++ ++.+. ...+.+.+ .+ +..+.+|++|+|+|..
T Consensus 117 l~~~~gv~~~~g~-~~~i~--~~~v~v~~~~~~~~~~~~~~~~d~lViATGs~ 166 (495)
T 2wpf_A 117 FNDTEGLDFFLGW-GSLES--KNVVVVRETADPKSAVKERLQADHILLATGSW 166 (495)
T ss_dssp HHHCTTEEEEESE-EEEEE--TTEEEEESSSSTTSCEEEEEEEEEEEECCCEE
T ss_pred HhcCCCeEEEEeE-EEEee--CCEEEEeecCCccCCCCeEEEcCEEEEeCCCC
Confidence 4567 99999885 55553 33444442 13 4479999999999974
No 280
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=47.76 E-value=12 Score=36.27 Aligned_cols=48 Identities=10% Similarity=0.025 Sum_probs=31.7
Q ss_pred HHHh-CCcEEEeCceeEEEEEcCCe---------EEEEe------CCCcEEEcCEEEEcCCCCh
Q psy3952 4 EFCE-LGGEIRLNQQVESFKENPES---------VTIST------KQGDHLESSYALVCAGLQA 51 (252)
Q Consensus 4 ~a~~-~G~~i~~~~~V~~i~~~~~~---------~~V~t------~~g~~i~A~~VV~AaG~ws 51 (252)
.+.+ .|++++.+++|.++...+.. +.|.+ .++..+.+|+||+|+|...
T Consensus 190 ~l~~~~~v~~~~~~~V~~i~~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~i~~d~lVlATGs~p 253 (965)
T 2gag_A 190 ELAEAEETTHLQRTTVFGSYDANYLIAAQRRTVHLDGPSGPGVSRERIWHIRAKQVVLATGAHE 253 (965)
T ss_dssp HHHHSTTEEEESSEEEEEEETTTEEEEEEECSTTCSSCCCTTCCSEEEEEEEEEEEEECCCEEE
T ss_pred HHhhcCCcEEEeCCEEEeeecCCceeeeEeecccccccccccCCCCceEEEECCEEEECCCCcc
Confidence 3445 49999999999988643321 12222 1123689999999999863
No 281
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=44.56 E-value=21 Score=31.63 Aligned_cols=42 Identities=12% Similarity=0.237 Sum_probs=25.7
Q ss_pred EEEeCceeEEEEEcCC--eEE------------EEeCCCcEEEcCEEEEcCCCChH
Q psy3952 11 EIRLNQQVESFKENPE--SVT------------ISTKQGDHLESSYALVCAGLQAD 52 (252)
Q Consensus 11 ~i~~~~~V~~i~~~~~--~~~------------V~t~~g~~i~A~~VV~AaG~ws~ 52 (252)
.+..++.+.+++..+. .++ |.+.+|.++++|.||.|+|.-..
T Consensus 355 ~l~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~v~~~dg~~~~~D~VI~ATGy~~~ 410 (501)
T 4b63_A 355 RILPERKITRVEHHGPQSRMRIHLKSSKPESEGAANDVKETLEVDALMVATGYNRN 410 (501)
T ss_dssp EEECSEEEEEEECCSSSSCEEEEEEESCC--------CCCEEEESEEEECCCEECC
T ss_pred eecCCcceeeeeecCCCCeEEEEeeeeEEeCCeeEeCCCeEEECCEEEECcCCCCC
Confidence 4556666666665332 232 23456778999999999997543
No 282
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=40.81 E-value=34 Score=29.65 Aligned_cols=40 Identities=10% Similarity=0.190 Sum_probs=27.9
Q ss_pred HHhCCcEEEeCceeEEEEEcCCeEEEEeCCCcEEEcCEEEEcCCCC
Q psy3952 5 FCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQ 50 (252)
Q Consensus 5 a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g~~i~A~~VV~AaG~w 50 (252)
+++.|++++.++ ++.+. .. .|.+ +|.++.+|++|+|+|..
T Consensus 103 ~~~~~v~~~~g~-~~~i~--~~--~v~~-~g~~~~~d~lviAtGs~ 142 (450)
T 1ges_A 103 LGKNNVDVIKGF-ARFVD--AK--TLEV-NGETITADHILIATGGR 142 (450)
T ss_dssp HHHTTCEEEESC-CEEEE--TT--EEEE-TTEEEEEEEEEECCCEE
T ss_pred HHhCCCEEEEeE-EEEec--CC--EEEE-CCEEEEeCEEEECCCCC
Confidence 456799999875 44443 23 3444 45479999999999964
No 283
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=39.84 E-value=23 Score=30.60 Aligned_cols=36 Identities=17% Similarity=0.291 Sum_probs=25.1
Q ss_pred CceeEEEEEcCCeEEEEeCCCcE-EEcCEEEEcCCCChH
Q psy3952 15 NQQVESFKENPESVTISTKQGDH-LESSYALVCAGLQAD 52 (252)
Q Consensus 15 ~~~V~~i~~~~~~~~V~t~~g~~-i~A~~VV~AaG~ws~ 52 (252)
+..|++++.+++ .|...+|.. +.+|.||.|+|.-.+
T Consensus 257 ~~~v~~~~~~~~--~v~~~dG~~~~~~D~vi~atG~~~~ 293 (447)
T 2gv8_A 257 VPEITKFDPTTR--EIYLKGGKVLSNIDRVIYCTGYLYS 293 (447)
T ss_dssp ECCEEEEETTTT--EEEETTTEEECCCSEEEECCCBCCC
T ss_pred ecCeEEEecCCC--EEEECCCCEeccCCEEEECCCCCcC
Confidence 467777764443 456667744 689999999997643
No 284
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=39.17 E-value=47 Score=29.95 Aligned_cols=43 Identities=12% Similarity=0.148 Sum_probs=28.6
Q ss_pred HHhCCcEEEeCceeEEEEEcCCeEEEEeCCC--cEEEcCEEEEcCCCC
Q psy3952 5 FCELGGEIRLNQQVESFKENPESVTISTKQG--DHLESSYALVCAGLQ 50 (252)
Q Consensus 5 a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g--~~i~A~~VV~AaG~w 50 (252)
.++.|++++.+. +..+. ...+.|.+.+| .++.+|+||+|+|..
T Consensus 216 ~~~~~V~~~~~~-~~~~~--~~~v~v~~~~g~~~~~~~d~lviAtGs~ 260 (598)
T 2x8g_A 216 LRDNQVTYLNAK-GRLIS--PHEVQITDKNQKVSTITGNKIILATGER 260 (598)
T ss_dssp HHHTTCEEECSE-EEEEE--TTEEEEECTTCCEEEEEEEEEEECCCEE
T ss_pred HhhCCcEEEEEE-EEEcC--CCEEEEEeCCCCeEEEEeCEEEEeCCCC
Confidence 345688887653 33332 33456666666 369999999999964
No 285
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=35.48 E-value=4.1 Score=35.90 Aligned_cols=40 Identities=18% Similarity=0.122 Sum_probs=28.9
Q ss_pred hHHHhCCcEEEeCceeEEEEEcCCeEEEEeCCCcEEEcCEEEEcCCCCh
Q psy3952 3 EEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQA 51 (252)
Q Consensus 3 ~~a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g~~i~A~~VV~AaG~ws 51 (252)
+.+++.|+++++++.|. . .|.++++ .+.+|+||+|+|.+.
T Consensus 180 ~~l~~~gv~~~~~~~v~------~--~v~~~~~-~~~~d~vvlAtG~~~ 219 (456)
T 2vdc_G 180 KLLADAGVIYHPNFEVG------R--DASLPEL-RRKHVAVLVATGVYK 219 (456)
T ss_dssp HHHHHTTCEEETTCCBT------T--TBCHHHH-HSSCSEEEECCCCCE
T ss_pred HHHHHCCcEEEeCCEec------c--EEEhhHh-HhhCCEEEEecCCCC
Confidence 34678899999998763 1 1334444 467999999999985
No 286
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=33.31 E-value=50 Score=28.81 Aligned_cols=44 Identities=11% Similarity=0.191 Sum_probs=29.3
Q ss_pred HHHhCCcEEEeCceeEEEEEcCCeEEEEeCCCcEEEcCEEEEcCCCCh
Q psy3952 4 EFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQA 51 (252)
Q Consensus 4 ~a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g~~i~A~~VV~AaG~ws 51 (252)
.+++.|++++.+ .+..+. ...+.+. .++..+.+|++|+|+|...
T Consensus 123 ~~~~~~v~~~~g-~~~~i~--~~~v~v~-~~~~~~~~d~lviAtG~~p 166 (484)
T 3o0h_A 123 GLQNSNVHIYES-RAVFVD--EHTLELS-VTGERISAEKILIATGAKI 166 (484)
T ss_dssp HHHHTTCEEEES-CEEEEE--TTEEEET-TTCCEEEEEEEEECCCEEE
T ss_pred HHHhCCCEEEEe-EEEEee--CCEEEEe-cCCeEEEeCEEEEccCCCc
Confidence 356779999887 455443 3333332 1444899999999999754
No 287
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=31.87 E-value=34 Score=29.73 Aligned_cols=42 Identities=19% Similarity=0.331 Sum_probs=28.0
Q ss_pred HHhCCcEEEeCceeEEEEEcCCeEEEEe-CCCcEEEcCEEEEcCCCCh
Q psy3952 5 FCELGGEIRLNQQVESFKENPESVTIST-KQGDHLESSYALVCAGLQA 51 (252)
Q Consensus 5 a~~~G~~i~~~~~V~~i~~~~~~~~V~t-~~g~~i~A~~VV~AaG~ws 51 (252)
+++.|++++.+ ++..+ +.. .|.+ .++..+.+|++|+|+|...
T Consensus 103 ~~~~gv~~~~g-~~~~i--~~~--~v~~~~~~~~~~~d~lviAtG~~p 145 (463)
T 4dna_A 103 LANAGAEILDT-RAELA--GPN--TVKLLASGKTVTAERIVIAVGGHP 145 (463)
T ss_dssp HHHHTCEEEES-CEEES--SSS--EEEETTTTEEEEEEEEEECCCEEE
T ss_pred HHhCCCEEEEE-EEEEe--eCC--EEEEecCCeEEEeCEEEEecCCCc
Confidence 45678998877 44433 222 3444 3455899999999999743
No 288
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=29.82 E-value=94 Score=24.71 Aligned_cols=47 Identities=9% Similarity=0.061 Sum_probs=32.7
Q ss_pred HHhCCcEEEeCceeEEEEEcCCe---EEEE---eCCCcEEEcCEEEEcCCCCh
Q psy3952 5 FCELGGEIRLNQQVESFKENPES---VTIS---TKQGDHLESSYALVCAGLQA 51 (252)
Q Consensus 5 a~~~G~~i~~~~~V~~i~~~~~~---~~V~---t~~g~~i~A~~VV~AaG~ws 51 (252)
....+.+.+..+.+.++...++. .++. +.++.++.+|.|++|.|.-.
T Consensus 198 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~d~vi~a~G~~p 250 (314)
T 4a5l_A 198 LNHPKIEVIWNSELVELEGDGDLLNGAKIHNLVSGEYKVVPVAGLFYAIGHSP 250 (314)
T ss_dssp HTCTTEEEECSEEEEEEEESSSSEEEEEEEETTTCCEEEEECSEEEECSCEEE
T ss_pred hcccceeeEeeeeeEEEEeeeeccceeEEeecccccceeeccccceEeccccc
Confidence 34557788888888888765543 3333 34455799999999999754
No 289
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=28.92 E-value=4.3 Score=35.73 Aligned_cols=39 Identities=13% Similarity=-0.053 Sum_probs=28.1
Q ss_pred HHHhCCcEEEeCceeEEEEEcCCeEEEEeCCCcEEEcCEEEEcCCCCh
Q psy3952 4 EFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQA 51 (252)
Q Consensus 4 ~a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g~~i~A~~VV~AaG~ws 51 (252)
.+++.|++++.++.| +. .|.+.++ .+.+|+||+|+|.+.
T Consensus 70 ~~~~~~v~~~~~v~v------~~--~v~~~~~-~~~~d~lViAtG~~~ 108 (456)
T 1lqt_A 70 TAEDPRFRFFGNVVV------GE--HVQPGEL-SERYDAVIYAVGAQS 108 (456)
T ss_dssp HHTSTTEEEEESCCB------TT--TBCHHHH-HHHSSEEEECCCCCE
T ss_pred HHhcCCCEEEeeEEE------CC--EEEECCC-eEeCCEEEEeeCCCC
Confidence 456679999887654 22 2445556 689999999999974
No 290
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=27.07 E-value=44 Score=25.23 Aligned_cols=38 Identities=8% Similarity=0.007 Sum_probs=29.1
Q ss_pred EEecCCeEEEec--cCCccccchHHHHHHHHHHHHhhcccc
Q psy3952 209 FHSAGRTLHCRN--APSPAATSSLAIAKHILNELRREFKLD 247 (252)
Q Consensus 209 i~~~~~~~~~~G--~~~~G~t~a~~~g~~va~~i~~~~~~~ 247 (252)
....++++ +.| +.|.|+..|-.-|+.+|+.|.+.|+.+
T Consensus 291 ~~~~~~v~-l~GDa~~g~gv~~A~~sG~~aA~~I~~~L~~e 330 (336)
T 3kkj_A 291 SDADLGIY-VCGDWCLSGRVEGAWLSGQEAARRLLEHLQLE 330 (336)
T ss_dssp EETTTTEE-ECCGGGTTSSHHHHHHHHHHHHHHHHHHTTC-
T ss_pred eeCCCCEE-EEecccCCcCHHHHHHHHHHHHHHHHHHhhcc
Confidence 33457875 445 567899999999999999999988765
No 291
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=26.97 E-value=77 Score=28.40 Aligned_cols=45 Identities=13% Similarity=0.204 Sum_probs=28.7
Q ss_pred HHHhCCcEEEeCceeEEEEEcCCeEEEEeC----CCcEEEcCEEEEcCCCCh
Q psy3952 4 EFCELGGEIRLNQQVESFKENPESVTISTK----QGDHLESSYALVCAGLQA 51 (252)
Q Consensus 4 ~a~~~G~~i~~~~~V~~i~~~~~~~~V~t~----~g~~i~A~~VV~AaG~ws 51 (252)
..+++|++++.+.. .+. +.+.+.|... ++.+++|+++|+|+|...
T Consensus 149 ~l~~~~V~~i~G~a--~f~-~~~~v~V~~~~~~~~~~~i~a~~iiIATGs~P 197 (542)
T 4b1b_A 149 GLRSSKVKYINGLA--KLK-DKNTVSYYLKGDLSKEETVTGKYILIATGCRP 197 (542)
T ss_dssp HHHHTTCEEECEEE--EEE-ETTEEEEEEC--CCCEEEEEEEEEEECCCEEE
T ss_pred HHHhCCCEEEeeeE--EEc-CCCcceEeecccCCceEEEeeeeEEeccCCCC
Confidence 35677888876542 222 3445555432 234699999999999753
No 292
>2i9o_A MHB8A peptide; beta-hairpin, alpha-helix, de novo protein; NMR {Synthetic}
Probab=26.25 E-value=62 Score=16.82 Aligned_cols=25 Identities=16% Similarity=0.169 Sum_probs=17.7
Q ss_pred EeccCCccccchHHHHHHHHHHHHh
Q psy3952 218 CRNAPSPAATSSLAIAKHILNELRR 242 (252)
Q Consensus 218 ~~G~~~~G~t~a~~~g~~va~~i~~ 242 (252)
--|.+|.|=+.+-+.++.+++.+.+
T Consensus 12 eggggggggsaaeayakriaeamak 36 (37)
T 2i9o_A 12 EGGGGGGGGSAAEAYAKRIAEAMAK 36 (37)
T ss_dssp CCSCCCCSCSSHHHHHHHHHHHHTT
T ss_pred ecCCCCCcchHHHHHHHHHHHHHhc
Confidence 3355566777788888888887653
No 293
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=26.16 E-value=5 Score=35.32 Aligned_cols=40 Identities=8% Similarity=-0.024 Sum_probs=28.7
Q ss_pred hHHHhCCcEEEeCceeEEEEEcCCeEEEEeCCCcEEEcCEEEEcCCCCh
Q psy3952 3 EEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQA 51 (252)
Q Consensus 3 ~~a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g~~i~A~~VV~AaG~ws 51 (252)
+.+++.|++++.++.|. . .|.+.+. .+.+|+||+|+|...
T Consensus 67 ~~~~~~gv~~~~~~~v~------~--~V~~~~~-~~~~d~lVlAtGs~~ 106 (460)
T 1cjc_A 67 QTARSDRCAFYGNVEVG------R--DVTVQEL-QDAYHAVVLSYGAED 106 (460)
T ss_dssp HHHTSTTEEEEBSCCBT------T--TBCHHHH-HHHSSEEEECCCCCE
T ss_pred HHHHhCCcEEEeeeEEe------e--EEEeccc-eEEcCEEEEecCcCC
Confidence 34567799999887762 1 1444444 578999999999975
No 294
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=20.09 E-value=9.1 Score=37.41 Aligned_cols=41 Identities=20% Similarity=0.205 Sum_probs=28.8
Q ss_pred hHHHhCCcEEEeCceeEEEEEcCCeEEEEeCCCcEEEcCEEEEcCCCC
Q psy3952 3 EEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQ 50 (252)
Q Consensus 3 ~~a~~~G~~i~~~~~V~~i~~~~~~~~V~t~~g~~i~A~~VV~AaG~w 50 (252)
+.+++.|+++++++.|.. . .|++.++..+.+|+||+|+|.+
T Consensus 246 ~~~~~~gv~~~~~~~v~~-----~--~v~~~~~~~~~~d~vvlAtGa~ 286 (1025)
T 1gte_A 246 ELMKDLGVKIICGKSLSE-----N--EITLNTLKEEGYKAAFIGIGLP 286 (1025)
T ss_dssp HHHHTTTCEEEESCCBST-----T--SBCHHHHHHTTCCEEEECCCCC
T ss_pred HHHHHCCcEEEcccEecc-----c--eEEhhhcCccCCCEEEEecCCC
Confidence 346778999999987732 1 1333344347899999999986
Done!