Query psy3954
Match_columns 268
No_of_seqs 286 out of 1850
Neff 9.5
Searched_HMMs 29240
Date Fri Aug 16 21:36:22 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3954.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/3954hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2r83_A Synaptotagmin-1; C2A-C2 100.0 2.6E-42 8.9E-47 293.2 21.9 224 26-264 4-249 (284)
2 1dqv_A Synaptotagmin III; beta 100.0 1.8E-41 6.1E-46 289.7 13.3 223 26-263 5-250 (296)
3 3b7y_A E3 ubiquitin-protein li 99.9 7.6E-22 2.6E-26 151.9 15.3 117 50-168 16-152 (153)
4 2ep6_A MCTP2 protein; beta san 99.9 2.7E-22 9.2E-27 150.9 12.5 115 50-168 9-131 (133)
5 3kwu_A MUNC13-1; calcium bindi 99.9 5.9E-22 2E-26 151.7 14.5 112 53-168 16-146 (148)
6 2fk9_A Protein kinase C, ETA t 99.9 2.3E-22 8E-27 154.6 10.3 109 50-168 25-156 (157)
7 1tjx_A Similar to synaptotagmi 99.9 1.9E-22 6.6E-27 156.3 9.9 109 155-263 8-123 (159)
8 3n5a_A Synaptotagmin-7; calciu 99.9 1.9E-22 6.4E-27 152.5 9.0 111 158-268 2-119 (138)
9 1w15_A Synaptotagmin IV; metal 99.9 5.2E-22 1.8E-26 152.9 10.0 110 155-264 13-129 (153)
10 2z0u_A WW domain-containing pr 99.9 2.8E-22 9.6E-27 154.5 8.0 107 156-262 27-141 (155)
11 2cm5_A Rabphilin-3A; protein t 99.9 6.1E-22 2.1E-26 154.6 9.6 109 155-263 20-135 (166)
12 3m7f_B E3 ubiquitin-protein li 99.9 4.6E-21 1.6E-25 151.0 14.4 116 51-168 5-140 (176)
13 1wfm_A Synaptotagmin XIII; C2 99.9 4.1E-21 1.4E-25 145.3 13.3 107 155-263 9-120 (138)
14 1wfj_A Putative elicitor-respo 99.9 1.3E-21 4.5E-26 147.6 10.1 114 50-168 6-129 (136)
15 1ugk_A Synaptotagmin IV, KIAA1 99.9 4.1E-21 1.4E-25 145.3 12.4 108 155-264 5-121 (138)
16 2bwq_A Regulating synaptic mem 99.9 2.9E-21 9.9E-26 144.3 11.4 107 157-263 3-119 (129)
17 3rdl_A Protein kinase C alpha 99.9 4E-21 1.4E-25 145.0 11.8 107 157-263 3-113 (137)
18 2dmh_A Myoferlin; beta-sandwic 99.9 7.9E-21 2.7E-25 144.0 13.5 113 52-168 5-132 (140)
19 2chd_A Rabphilin-3A, exophilin 99.9 1.4E-21 4.9E-26 148.5 9.2 111 155-265 12-130 (142)
20 3fdw_A Synaptotagmin-like prot 99.9 3.1E-21 1.1E-25 147.7 11.1 109 155-263 6-122 (148)
21 1a25_A CALB, protein kinase C 99.9 3.4E-21 1.2E-25 147.7 10.8 110 155-264 16-129 (149)
22 2z0u_A WW domain-containing pr 99.9 1.3E-21 4.4E-26 150.8 8.5 112 24-150 26-155 (155)
23 1wfm_A Synaptotagmin XIII; C2 99.9 1.2E-20 4E-25 142.8 13.6 115 23-153 8-135 (138)
24 2enp_A B/K protein; C2 type 1, 99.8 3.2E-21 1.1E-25 147.5 10.2 112 155-268 9-136 (147)
25 3f04_A Synaptotagmin-1; C2A, c 99.8 3.9E-21 1.3E-25 146.3 10.2 111 25-150 18-142 (143)
26 2d8k_A Synaptotagmin VII; exoc 99.8 7.9E-21 2.7E-25 144.2 11.8 113 26-153 11-138 (141)
27 2dmg_A KIAA1228 protein; beta- 99.8 6.5E-21 2.2E-25 144.9 11.2 108 155-263 7-123 (142)
28 2b3r_A Phosphatidylinositol-4- 99.8 1.1E-20 3.6E-25 142.3 12.0 107 158-264 8-119 (134)
29 1rsy_A Synaptotagmin I; calciu 99.8 6E-21 2.1E-25 146.8 10.4 115 22-151 23-151 (152)
30 1gmi_A Protein kinase C, epsil 99.8 5.5E-21 1.9E-25 144.2 10.0 106 53-168 5-132 (136)
31 3fdw_A Synaptotagmin-like prot 99.8 3.2E-21 1.1E-25 147.6 8.8 114 26-154 8-138 (148)
32 3fbk_A RGS3, RGP3, regulator o 99.8 7.3E-21 2.5E-25 146.5 10.4 109 155-263 10-124 (153)
33 2d8k_A Synaptotagmin VII; exoc 99.8 2.5E-20 8.4E-25 141.5 12.8 108 155-264 9-124 (141)
34 1rsy_A Synaptotagmin I; calciu 99.8 9.8E-21 3.4E-25 145.6 10.3 107 156-264 26-139 (152)
35 1rh8_A Piccolo protein; beta-s 99.8 2.2E-21 7.5E-26 147.5 6.0 108 156-263 4-126 (142)
36 3f04_A Synaptotagmin-1; C2A, c 99.8 1.9E-20 6.3E-25 142.5 11.0 107 156-264 18-131 (143)
37 1v27_A Regulating synaptic mem 99.8 5.9E-21 2E-25 144.8 7.8 108 156-263 5-122 (141)
38 3pyc_A E3 ubiquitin-protein li 99.8 2.9E-20 9.8E-25 139.5 11.3 112 53-167 4-131 (132)
39 2b3r_A Phosphatidylinositol-4- 99.8 1.6E-20 5.3E-25 141.4 9.8 98 53-152 19-132 (134)
40 2q3x_A Regulating synaptic mem 99.8 2.3E-20 8E-25 146.3 10.9 113 24-153 15-142 (171)
41 1rlw_A Phospholipase A2, CALB 99.8 4.1E-20 1.4E-24 137.5 11.3 106 53-166 2-122 (126)
42 2q3x_A Regulating synaptic mem 99.8 6.3E-20 2.1E-24 143.8 12.9 107 156-263 16-127 (171)
43 2bwq_A Regulating synaptic mem 99.8 2.6E-20 9E-25 139.1 10.2 109 25-149 2-129 (129)
44 2nq3_A Itchy homolog E3 ubiqui 99.8 4.2E-20 1.4E-24 144.9 11.6 116 50-168 32-160 (173)
45 1v27_A Regulating synaptic mem 99.8 3.6E-20 1.2E-24 140.5 10.9 112 26-153 6-136 (141)
46 2enp_A B/K protein; C2 type 1, 99.8 2.1E-20 7.3E-25 142.8 9.5 116 23-153 8-144 (147)
47 2dmg_A KIAA1228 protein; beta- 99.8 3.9E-20 1.4E-24 140.5 9.8 113 25-153 8-138 (142)
48 1ugk_A Synaptotagmin IV, KIAA1 99.8 1E-19 3.6E-24 137.5 11.7 112 26-152 7-135 (138)
49 3fbk_A RGS3, RGP3, regulator o 99.8 3.5E-20 1.2E-24 142.6 9.2 116 22-153 8-140 (153)
50 2chd_A Rabphilin-3A, exophilin 99.8 5.6E-20 1.9E-24 139.7 9.6 113 24-151 12-141 (142)
51 3n5a_A Synaptotagmin-7; calciu 99.8 1.8E-19 6E-24 136.1 11.7 105 28-149 3-123 (138)
52 3rdl_A Protein kinase C alpha 99.8 7.2E-20 2.5E-24 138.1 9.3 109 26-152 3-126 (137)
53 1tjx_A Similar to synaptotagmi 99.8 3.2E-19 1.1E-23 138.1 12.9 114 24-152 8-149 (159)
54 1rh8_A Piccolo protein; beta-s 99.8 4.5E-20 1.5E-24 140.2 6.2 110 26-152 5-140 (142)
55 1a25_A CALB, protein kinase C 99.8 2.7E-19 9.2E-24 137.0 10.2 109 26-152 18-141 (149)
56 1w15_A Synaptotagmin IV; metal 99.8 2.8E-19 9.6E-24 137.5 9.3 110 24-150 13-138 (153)
57 2cm5_A Rabphilin-3A; protein t 99.8 6.1E-19 2.1E-23 137.5 11.3 109 23-148 19-143 (166)
58 2ep6_A MCTP2 protein; beta san 99.8 5E-19 1.7E-23 132.9 8.1 94 169-268 12-108 (133)
59 1rlw_A Phospholipase A2, CALB 99.8 1.2E-18 4.2E-23 129.4 9.3 95 169-265 2-101 (126)
60 2r83_A Synaptotagmin-1; C2A-C2 99.8 3.8E-18 1.3E-22 144.2 13.2 106 157-264 4-116 (284)
61 2dmh_A Myoferlin; beta-sandwic 99.8 2.8E-18 9.7E-23 129.8 10.8 90 169-264 6-101 (140)
62 3kwu_A MUNC13-1; calcium bindi 99.8 3.8E-18 1.3E-22 130.4 9.7 94 169-268 16-123 (148)
63 1dqv_A Synaptotagmin III; beta 99.7 6.6E-18 2.3E-22 143.7 11.2 100 156-257 4-110 (296)
64 3b7y_A E3 ubiquitin-protein li 99.7 2.6E-17 8.9E-22 126.4 12.9 96 169-265 19-118 (153)
65 2fk9_A Protein kinase C, ETA t 99.7 5.8E-18 2E-22 130.1 8.0 88 169-262 28-128 (157)
66 2cjt_A UNC-13 homolog A, MUNC1 99.7 1.4E-17 4.8E-22 124.6 9.5 112 53-168 4-131 (131)
67 3m7f_B E3 ubiquitin-protein li 99.7 3.9E-17 1.3E-21 128.5 11.8 95 169-264 7-105 (176)
68 3pyc_A E3 ubiquitin-protein li 99.7 2E-17 6.8E-22 123.9 8.5 87 170-261 5-97 (132)
69 1wfj_A Putative elicitor-respo 99.7 1.7E-17 5.7E-22 124.9 7.2 86 170-261 10-99 (136)
70 1gmi_A Protein kinase C, epsil 99.7 1.5E-17 5.3E-22 125.2 7.0 89 169-263 5-107 (136)
71 3jzy_A Intersectin 2; C2 domai 99.7 8.2E-17 2.8E-21 146.8 11.9 110 51-167 384-506 (510)
72 3l9b_A Otoferlin; C2-domain, b 99.7 8.1E-17 2.8E-21 119.4 9.4 110 53-168 20-139 (144)
73 1djx_A PLC-D1, phosphoinositid 99.7 1.1E-16 3.6E-21 148.5 12.4 142 18-167 454-622 (624)
74 2nq3_A Itchy homolog E3 ubiqui 99.7 9.6E-17 3.3E-21 125.7 9.2 87 169-262 35-124 (173)
75 3nsj_A Perforin-1; pore formin 99.7 4.3E-16 1.5E-20 141.6 13.0 116 37-166 375-501 (540)
76 2cjt_A UNC-13 homolog A, MUNC1 99.7 2.6E-16 8.8E-21 117.6 8.5 85 169-263 4-90 (131)
77 2cjs_A UNC-13 homolog A, MUNC1 99.7 4.4E-16 1.5E-20 121.1 10.1 83 52-138 12-99 (167)
78 1djx_A PLC-D1, phosphoinositid 99.6 1.8E-15 6E-20 140.3 9.6 99 169-267 496-600 (624)
79 2cjs_A UNC-13 homolog A, MUNC1 99.6 3.6E-15 1.2E-19 115.9 9.6 85 169-263 13-99 (167)
80 3nsj_A Perforin-1; pore formin 99.6 3.2E-15 1.1E-19 135.8 10.4 87 169-260 393-482 (540)
81 3l9b_A Otoferlin; C2-domain, b 99.6 3.7E-15 1.3E-19 110.5 7.5 85 171-263 22-110 (144)
82 3bxj_A RAS GTPase-activating p 99.6 1.7E-16 5.8E-21 143.4 -0.4 115 50-168 7-156 (483)
83 3jzy_A Intersectin 2; C2 domai 99.5 1.2E-14 4E-19 132.5 9.8 90 169-263 386-478 (510)
84 1cjy_A CPLA2, protein (cytosol 99.5 7.4E-15 2.5E-19 137.5 8.5 98 51-151 15-127 (749)
85 3pfq_A PKC-B, PKC-beta, protei 99.5 3E-14 1E-18 134.0 11.1 109 155-263 157-269 (674)
86 1cjy_A CPLA2, protein (cytosol 99.5 4.5E-14 1.5E-18 132.3 9.3 95 169-265 17-116 (749)
87 3ohm_B 1-phosphatidylinositol- 99.4 3.6E-13 1.2E-17 128.0 10.3 138 17-168 681-844 (885)
88 3qr0_A Phospholipase C-beta (P 99.4 6E-13 2E-17 125.9 10.9 137 17-167 606-769 (816)
89 2zkm_X 1-phosphatidylinositol- 99.4 7.8E-13 2.7E-17 125.5 10.8 137 17-167 634-797 (799)
90 3pfq_A PKC-B, PKC-beta, protei 99.3 8.3E-13 2.8E-17 124.2 6.9 95 53-150 171-280 (674)
91 3qr0_A Phospholipase C-beta (P 99.3 2.9E-12 9.9E-17 121.2 9.4 92 170-266 650-746 (816)
92 2zkm_X 1-phosphatidylinositol- 99.3 2.9E-12 1E-16 121.6 9.2 93 169-266 677-774 (799)
93 3ohm_B 1-phosphatidylinositol- 99.3 5E-12 1.7E-16 120.3 9.3 90 171-265 726-819 (885)
94 3bxj_A RAS GTPase-activating p 99.2 1E-12 3.5E-17 118.7 -0.4 88 169-264 10-105 (483)
95 1yrk_A NPKC-delta, protein kin 99.2 2.5E-10 8.6E-15 82.1 12.1 102 53-168 5-124 (126)
96 2enj_A NPKC-theta, protein kin 99.2 1.8E-10 6E-15 84.0 9.5 104 51-168 7-129 (138)
97 1yrk_A NPKC-delta, protein kin 98.2 2.3E-05 7.9E-10 56.3 10.6 86 171-262 7-95 (126)
98 2enj_A NPKC-theta, protein kin 97.9 4.9E-05 1.7E-09 55.4 8.3 86 171-262 11-100 (138)
99 2yrb_A Protein fantom; beta sa 96.1 0.058 2E-06 40.4 9.8 114 50-167 14-148 (156)
100 3hhm_A Phosphatidylinositol-4, 95.5 0.052 1.8E-06 52.9 9.4 93 169-262 354-456 (1091)
101 2wxf_A Phosphatidylinositol-4, 95.4 0.062 2.1E-06 51.9 9.3 93 169-262 216-325 (940)
102 3l4c_A Dedicator of cytokinesi 95.1 0.094 3.2E-06 41.5 8.0 56 79-134 77-138 (220)
103 3l4c_A Dedicator of cytokinesi 94.9 0.51 1.8E-05 37.3 11.7 58 204-261 76-140 (220)
104 1e7u_A Phosphatidylinositol 3- 94.5 0.1 3.4E-06 50.5 8.1 94 169-262 217-331 (961)
105 2y3a_A Phosphatidylinositol-4, 94.0 0.064 2.2E-06 52.5 5.7 98 163-261 346-470 (1092)
106 2wxf_A Phosphatidylinositol-4, 92.6 0.25 8.6E-06 47.7 7.3 85 51-137 214-325 (940)
107 3hhm_A Phosphatidylinositol-4, 92.4 0.37 1.3E-05 47.1 8.2 83 53-137 354-456 (1091)
108 2y3a_A Phosphatidylinositol-4, 90.8 0.44 1.5E-05 46.7 6.8 65 51-117 350-430 (1092)
109 1e7u_A Phosphatidylinositol 3- 87.9 1 3.5E-05 43.6 6.9 84 53-137 217-331 (961)
110 2qzq_A Axin interactor, dorsal 82.1 2.8 9.4E-05 31.0 5.4 91 172-263 16-115 (152)
111 2yrb_A Protein fantom; beta sa 72.6 4.1 0.00014 30.3 4.0 71 189-262 40-117 (156)
112 2qzq_A Axin interactor, dorsal 32.7 84 0.0029 23.0 5.1 87 50-138 10-115 (152)
No 1
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=100.00 E-value=2.6e-42 Score=293.20 Aligned_cols=224 Identities=22% Similarity=0.312 Sum_probs=197.4
Q ss_pred ceEEEeeeeeeccCcccccccccccCCCeEEEEEEEcccCccc--cCCCCCC-ceE--------EEeeecccCCCCCCcc
Q psy3954 26 KLMVKHTAYKYYLQPRKRLTANQIIQDLGTLRIRIQYTADHIL--QPHYYED-LCT--------QILNSPSVNPVTSPFF 94 (268)
Q Consensus 26 ~l~~~~~~~~y~~~p~~~~~~~~~~~~~~~L~V~v~~~a~~L~--~~~~~~d-yv~--------~~~~T~~~~~t~nP~w 94 (268)
.+|.+..++.|... .+.|.|+|+ +|++|+ +..+.+| ||+ ..++|+++++++||+|
T Consensus 4 ~~G~l~~~l~y~~~-------------~~~L~v~v~-~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~T~~~~~~~nP~w 69 (284)
T 2r83_A 4 KLGKLQYSLDYDFQ-------------NNQLLVGII-QAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVF 69 (284)
T ss_dssp CCCEEEEEEEEETT-------------TTEEEEEEE-EEECCCCCSSSSSCCEEEEEEEETCTTSCEECCCCCSCSSCEE
T ss_pred ceeEEEEEEEEECC-------------CCEEEEEEE-EeeCCCCCCCCCCCCeEEEEEEEcCCCceEeCCcccCCCCCee
Confidence 57899999999876 789999999 999999 7788999 998 3678999999999999
Q ss_pred CcEEEEEecCC---CcEEEEEEEeCCCCCCCCceeEEEEEeccccccccCccceecCcccCCC-cccceEEEEEEEEc--
Q psy3954 95 GEEFQFDIPRR---FRHLAVYAYDRDRTSKTDRVLGKVTIQRSDLHRISNKEHWFPLTPVTQD-SEVQGKIQIGVLST-- 168 (268)
Q Consensus 95 ne~f~f~v~~~---~~~l~~~v~d~d~~~~~d~~iG~~~i~l~~l~~~~~~~~w~~L~~~~~~-~~~~G~i~v~l~~~-- 168 (268)
||+|.|.++.. ...|.|+|||.| .+++|++||++.++|.++..+...+.|++|.+.... ....|+|.+++.|.
T Consensus 70 ne~f~f~v~~~~~~~~~l~~~V~d~d-~~~~~~~lG~~~i~l~~l~~~~~~~~w~~L~~~~~~~~~~~G~i~l~l~~~p~ 148 (284)
T 2r83_A 70 NEQFTFKVPYSELAGKTLVMAVYDFD-RFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQSAEKEEQEKLGDICFSLRYVPT 148 (284)
T ss_dssp EEEEEECCCGGGCTTCEEEEEEEECC-SSSCCCEEEEEEEEGGGCCCSSCEEEEEECBCCSSCCCCCCCEEEEEEEEETT
T ss_pred CceEEEEechHHhCcCEEEEEEEECC-CCCCCceeEEEEEcchhcccCCcceeEEEeeccccccccccccEEEEEEecCc
Confidence 99999998764 579999999999 788999999999999999887788999999876432 34579999999997
Q ss_pred CCeEEEEEceecCCC--CCCCCCCCEEEEEEEecCCcceeeeceeccCCCCCccceEEEEEccCCCCce--EEEEEEecC
Q psy3954 169 PTSLMVNVNEASGLT--QVNGQCDPTAMVTVHYTHNKSDVQKSKVKKKSHSPVFNESFMFDRSLGDPIE--LVVSLHHDI 244 (268)
Q Consensus 169 ~~~L~v~v~~a~~L~--~~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~~ne~f~f~v~~~~~~~--l~i~V~d~~ 244 (268)
.+.|.|.|++|++|+ +..|.+||||++++..++....+++|+++++++||+|||+|.|.++.+++.. |.|+|||++
T Consensus 149 ~~~l~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V~d~d 228 (284)
T 2r83_A 149 AGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDYD 228 (284)
T ss_dssp TTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCTTTGGGEEEEEEEEECC
T ss_pred CCceEEEEEEeECCCCcCCCCCcCeEEEEEEEeCCcEeeeeccceecCCCCCEEceeEEEeCCHHHhCceEEEEEEEeCC
Confidence 789999999999997 5677899999999985544456789999999999999999999998877754 999999999
Q ss_pred CC-CCeeeEEEEEeCCccCCC
Q psy3954 245 SG-LNVFLGEVHIPLNNKETS 264 (268)
Q Consensus 245 ~~-~~~~lG~~~l~l~~~~~~ 264 (268)
.+ ++++||++.|+++++..+
T Consensus 229 ~~~~~~~iG~~~i~l~~~~~~ 249 (284)
T 2r83_A 229 KIGKNDAIGKVFVGYNSTGAE 249 (284)
T ss_dssp SSSCCCEEEEEEEETTCCHHH
T ss_pred CCCCCcEEEEEEECCCCCCcH
Confidence 98 999999999999886543
No 2
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=100.00 E-value=1.8e-41 Score=289.67 Aligned_cols=223 Identities=19% Similarity=0.295 Sum_probs=192.9
Q ss_pred ceEEEeeeeeeccCcccccccccccCCCeEEEEEEEcccCccc--cCCCCCC-ceE--------EEeeecccCCCCCCcc
Q psy3954 26 KLMVKHTAYKYYLQPRKRLTANQIIQDLGTLRIRIQYTADHIL--QPHYYED-LCT--------QILNSPSVNPVTSPFF 94 (268)
Q Consensus 26 ~l~~~~~~~~y~~~p~~~~~~~~~~~~~~~L~V~v~~~a~~L~--~~~~~~d-yv~--------~~~~T~~~~~t~nP~w 94 (268)
.+|.++.++.|... .+.|.|+|+ +|++|+ +..|.+| ||+ +.+||+++++++||+|
T Consensus 5 ~~G~l~~~l~y~~~-------------~~~L~v~v~-~a~~L~~~d~~g~~dPyv~v~l~~~~~~~~kT~v~~~t~nP~w 70 (296)
T 1dqv_A 5 PCGRISFALRYLYG-------------SDQLVVRIL-QALDLPAKDSNGFSDPYVKIYLLPDRKKKFQTKVHRKTLNPIF 70 (296)
T ss_dssp SSCEEEEEEECCSS-------------SCEEEEEEE-EEECCCCCSTTSCCCEEEEEECTTSTTSCEECCCCCSCSSCEE
T ss_pred eeeEEEEEEEEeCC-------------CCEEEEEEE-EeECCCCcCCCCCcCeEEEEEEEcCCCeeEeCCccCCCCCCcE
Confidence 46899999999876 789999999 999999 7788999 998 4679999999999999
Q ss_pred CcEEEEEecCC---CcEEEEEEEeCCCCCCCCceeEEEEEe-cccccc-ccCccceecCcccCCCcccceEEEEEEEEc-
Q psy3954 95 GEEFQFDIPRR---FRHLAVYAYDRDRTSKTDRVLGKVTIQ-RSDLHR-ISNKEHWFPLTPVTQDSEVQGKIQIGVLST- 168 (268)
Q Consensus 95 ne~f~f~v~~~---~~~l~~~v~d~d~~~~~d~~iG~~~i~-l~~l~~-~~~~~~w~~L~~~~~~~~~~G~i~v~l~~~- 168 (268)
||+|.|.++.. ...|.|+|||+| .+++|++||++.++ +.++.. ......|++|.+........|+|.+++.|.
T Consensus 71 ne~f~f~v~~~~l~~~~L~~~V~d~d-~~~~~~~iG~~~i~~l~~~~~~~~~~~~w~~L~~~~~~~~~~G~i~vsl~y~~ 149 (296)
T 1dqv_A 71 NETFQFSVPLAELAQRKLHFSVYDFD-RFSRHDLIGQVVLDNLLELAEQPPDRPLWRDILEGGSEKADLGELNFSLCYLP 149 (296)
T ss_dssp EEEEEEECCGGGGSSCCCEEEEEECC-SSSCCCEEEEEECCCTTGGGSSCSSCCCCEECBCCSSCCSCCCEEEEEEEEET
T ss_pred eeEEEEEecHHHhcCCEEEEEEEEcC-CCCCCceEEEEEeccccccccCCccceeeeccccccccccccceEEEEEEecc
Confidence 99999998754 468999999999 78899999999996 444432 345678999987665555689999999997
Q ss_pred -CCeEEEEEceecCCC--CCCCCCCCEEEEEEEecCCcceeeeceeccCCCCCccceEEEEEccCCCCce--EEEEEEec
Q psy3954 169 -PTSLMVNVNEASGLT--QVNGQCDPTAMVTVHYTHNKSDVQKSKVKKKSHSPVFNESFMFDRSLGDPIE--LVVSLHHD 243 (268)
Q Consensus 169 -~~~L~v~v~~a~~L~--~~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~~ne~f~f~v~~~~~~~--l~i~V~d~ 243 (268)
.+.|.|.|++|++|+ +..|.+||||++++..++....+++|+++++++||+|||.|.|.++.+.+.. |.|+|||+
T Consensus 150 ~~~~l~v~v~~a~~L~~~d~~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~ 229 (296)
T 1dqv_A 150 TAGLLTVTIIKASNLKAMDLTGFSDPYVKASLISEGRRLKKRKTSIKKNTLNPTYNEALVFDVAPESVENVGLSIAVVDY 229 (296)
T ss_dssp TTTEEEEEEEEEESCCCCSSSSCCCEEEEECCCTTCCTTSCEECCCCCSCSSCEEEECCCCCCCSGGGGSCCCCCEEEEC
T ss_pred ccceeEEEEEEeecCCccCCCCCCCcEEEEEEEeCCcCccceecceecCCCCCeECceEEEEcCHHHccCcEEEEEEEeC
Confidence 799999999999997 5678899999999975444456889999999999999999999998776654 99999999
Q ss_pred CCC-CCeeeEEEEEeCCccCC
Q psy3954 244 ISG-LNVFLGEVHIPLNNKET 263 (268)
Q Consensus 244 ~~~-~~~~lG~~~l~l~~~~~ 263 (268)
+.+ ++++||++.|+++++..
T Consensus 230 d~~~~~~~iG~~~i~l~~~~~ 250 (296)
T 1dqv_A 230 DCIGHNEVIGVCRVGPEAADP 250 (296)
T ss_dssp CSSSCCEEEEECCCSSCTTCH
T ss_pred CCCCCCceEEEEEECCccCCc
Confidence 998 99999999999998754
No 3
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.88 E-value=7.6e-22 Score=151.94 Aligned_cols=117 Identities=17% Similarity=0.254 Sum_probs=98.3
Q ss_pred cCCCeEEEEEEEcccCccc--cCCCCCC-ceE-----------EEeeecccCCCCCCccCcEEEEEecCCCcEEEEEEEe
Q psy3954 50 IQDLGTLRIRIQYTADHIL--QPHYYED-LCT-----------QILNSPSVNPVTSPFFGEEFQFDIPRRFRHLAVYAYD 115 (268)
Q Consensus 50 ~~~~~~L~V~v~~~a~~L~--~~~~~~d-yv~-----------~~~~T~~~~~t~nP~wne~f~f~v~~~~~~l~~~v~d 115 (268)
....+.|.|+|+ +|++|+ +..+.+| ||+ ..+||+++++++||+|||+|.|.+......|.|+|||
T Consensus 16 ~~~~~~L~V~v~-~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~l~~~V~d 94 (153)
T 3b7y_A 16 EENSRIVRVRVI-AGIGLAKKDILGASDPYVRVTLYDPMNGVLTSVQTKTIKKSLNPKWNEEILFRVHPQQHRLLFEVFD 94 (153)
T ss_dssp CTTCEEEEEEEE-EEESCC-------CCEEEEEEEEETTTEEEEEEECCCCSSCSSCCCCEEEEEEECTTTCEEEEEEEE
T ss_pred CCCccEEEEEEE-EeeCCCCCCCCCCCCcEEEEEEECCCCccceeeeCccccCCCCCCCCCEEEEEecCCCCEEEEEEEE
Confidence 455789999999 999999 6778999 998 2679999999999999999999998888899999999
Q ss_pred CCCCCCCCceeEEEEEeccccccccCc------cceecCcccCCCcccceEEEEEEEEc
Q psy3954 116 RDRTSKTDRVLGKVTIQRSDLHRISNK------EHWFPLTPVTQDSEVQGKIQIGVLST 168 (268)
Q Consensus 116 ~d~~~~~d~~iG~~~i~l~~l~~~~~~------~~w~~L~~~~~~~~~~G~i~v~l~~~ 168 (268)
++ .+++|++||++.+++.++...... ..|++|.+........|+|++++.|.
T Consensus 95 ~d-~~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~G~i~l~l~~~ 152 (153)
T 3b7y_A 95 EN-RLTRDDFLGQVDVPLYPLPTENPRLERPYTFKDFVLHPRSHKSRVKGYLRLKMTYL 152 (153)
T ss_dssp CC-SSSCCEEEEEEEEECCSCCBCCTTSCCCCCCEEEECBCSSTTCCCCSEEEEEEEEC
T ss_pred CC-CCcCCCeeEEEEEEHHHcccCCCcccccccccccccccccCCCCcceEEEEEEEEe
Confidence 99 788999999999999999865543 58999988765556789999999884
No 4
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.88 E-value=2.7e-22 Score=150.86 Aligned_cols=115 Identities=23% Similarity=0.353 Sum_probs=101.6
Q ss_pred cCCCeEEEEEEEcccCccc--cCCCCCC-ceE-----EEeeecccCCCCCCccCcEEEEEecCCCcEEEEEEEeCCCCCC
Q psy3954 50 IQDLGTLRIRIQYTADHIL--QPHYYED-LCT-----QILNSPSVNPVTSPFFGEEFQFDIPRRFRHLAVYAYDRDRTSK 121 (268)
Q Consensus 50 ~~~~~~L~V~v~~~a~~L~--~~~~~~d-yv~-----~~~~T~~~~~t~nP~wne~f~f~v~~~~~~l~~~v~d~d~~~~ 121 (268)
.+..+.|.|+|+ +|++|+ +..|.+| ||+ +.+||+++++++||+|||+|.|.+......|.|+|||++ ..+
T Consensus 9 ~~~~~~L~v~v~-~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~l~i~V~d~d-~~~ 86 (133)
T 2ep6_A 9 VKDVGILQVKVL-KAADLLAADFSGKSDPFCLLELGNDRLQTHTVYKNLNPEWNKVFTFPIKDIHDVLEVTVFDED-GDK 86 (133)
T ss_dssp CCCSEEEEEEEE-EEESCCCSSSSSCCCEEEEEEETTEEEECCCCSSCSSCCCCEEEEEEESCTTCEEEEEEEEEE-TTE
T ss_pred cCCceEEEEEEE-eeECCCCCCCCCCcCeEEEEEECCEEEEeeeecCCCCCccccEEEEEecCCCCEEEEEEEECC-CCC
Confidence 345899999999 999999 7778999 999 788999999999999999999999887889999999999 788
Q ss_pred CCceeEEEEEeccccccccCccceecCcccCCCcccceEEEEEEEEc
Q psy3954 122 TDRVLGKVTIQRSDLHRISNKEHWFPLTPVTQDSEVQGKIQIGVLST 168 (268)
Q Consensus 122 ~d~~iG~~~i~l~~l~~~~~~~~w~~L~~~~~~~~~~G~i~v~l~~~ 168 (268)
+|++||++.+++.++..+ ...|++|.+........|+|++++.|.
T Consensus 87 ~~~~lG~~~i~l~~l~~~--~~~w~~L~~~~~~~~~~G~i~l~i~~~ 131 (133)
T 2ep6_A 87 PPDFLGKVAIPLLSIRDG--QPNCYVLKNKDLEQAFKGVIYLEMDLI 131 (133)
T ss_dssp EEEECCBCEEEGGGCCSS--CCEECCCBCSCTTSCCSSEEEEEEEEE
T ss_pred CCCeeEEEEEEHHHccCC--CceEEEeecCCCCCccceEEEEEEEEE
Confidence 899999999999999643 468999987665556789999998763
No 5
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.88 E-value=5.9e-22 Score=151.69 Aligned_cols=112 Identities=21% Similarity=0.354 Sum_probs=100.6
Q ss_pred CeEEEEEEEcccCccc--cCCCCCC-ceE-----EEeeecccCCCCCCccCcEEEEEecCCCcEEEEEEEeCCCCC----
Q psy3954 53 LGTLRIRIQYTADHIL--QPHYYED-LCT-----QILNSPSVNPVTSPFFGEEFQFDIPRRFRHLAVYAYDRDRTS---- 120 (268)
Q Consensus 53 ~~~L~V~v~~~a~~L~--~~~~~~d-yv~-----~~~~T~~~~~t~nP~wne~f~f~v~~~~~~l~~~v~d~d~~~---- 120 (268)
.+.|.|+|+ +|++|+ +..+.+| ||+ +.++|+++++|+||.|||+|.|.+......|.|+|||.| ..
T Consensus 16 ~~~L~V~v~-~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~t~nP~Wne~f~f~v~~~~~~l~~~v~d~d-~~~~~~ 93 (148)
T 3kwu_A 16 SAKISITVV-CAQGLQAKDKTGSSDPYVTVQVGKTKKRTKTIYGNLNPVWEENFHFECHNSSDRIKVRVLDED-DDIKSR 93 (148)
T ss_dssp CEEEEEEEE-EEESCCCCSTTSCCCEEEEEEETTEEEECCCCCSCSSCEEEEEEEEEECSTTCEEEEEEEECC-CSHHHH
T ss_pred ccEEEEEEE-eeeCCCCCCCCCCcCeEEEEEECCEEEECCccCCCCCCCcccEEEEEecCCCCEEEEEEEECC-CCcccc
Confidence 689999999 999999 7788999 999 789999999999999999999999887789999999999 64
Q ss_pred -------CCCceeEEEEEeccccccccCccceecCcccCCCcccceEEEEEEEEc
Q psy3954 121 -------KTDRVLGKVTIQRSDLHRISNKEHWFPLTPVTQDSEVQGKIQIGVLST 168 (268)
Q Consensus 121 -------~~d~~iG~~~i~l~~l~~~~~~~~w~~L~~~~~~~~~~G~i~v~l~~~ 168 (268)
++|++||++.+++.++. ...+.|++|.+........|+|++++.|.
T Consensus 94 ~~~~~~~~~~~~lG~~~i~l~~l~--~~~~~w~~L~~~~~~~~~~G~i~l~l~~e 146 (148)
T 3kwu_A 94 VKQRFKRESDDFLGQTIIEVRTLS--GEMDVWYNLDKRTDKSAVSGAIRLHISVE 146 (148)
T ss_dssp HHTTTSSCSSEEEEEEEEEGGGCC--SEEEEEEECBCSSTTCCCCCEEEEEEEEE
T ss_pred ccccccCCCCccEEEEEEEHHHCc--CCCCEEEEcccCCCCCCCceEEEEEEEEE
Confidence 78999999999999983 45689999997766666789999999874
No 6
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.87 E-value=2.3e-22 Score=154.64 Aligned_cols=109 Identities=25% Similarity=0.376 Sum_probs=94.4
Q ss_pred cCCCeEEEEEEEcccCccc--cC----------CCCCC-ceE------EEeeecccCCCCCCccCcEEEEEecCCCcEEE
Q psy3954 50 IQDLGTLRIRIQYTADHIL--QP----------HYYED-LCT------QILNSPSVNPVTSPFFGEEFQFDIPRRFRHLA 110 (268)
Q Consensus 50 ~~~~~~L~V~v~~~a~~L~--~~----------~~~~d-yv~------~~~~T~~~~~t~nP~wne~f~f~v~~~~~~l~ 110 (268)
....|.|+|+|+ +|++|+ |. .+.+| ||+ ...||+++++|+||+|||+|.|.+... ..|.
T Consensus 25 ~~~~g~L~V~Vi-eA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~~~~~~kT~v~~ktlnP~WNE~F~f~v~~~-~~L~ 102 (157)
T 2fk9_A 25 MKFNGYLRVRIG-EAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVDQVRVGQTSTKQKTNKPTYNEEFCANVTDG-GHLE 102 (157)
T ss_dssp CCEEEEEEEEEE-EEECCCCCHHHHHTTTSSSSCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEEE-CEEE
T ss_pred ccCccEEEEEEE-EEECCCCccccccccccccCCCCCCeEEEEEECCEeeEEeeecCCCCCCccCcEEEEEcCCC-CEEE
Confidence 345789999999 999998 42 26789 999 457999999999999999999998764 7999
Q ss_pred EEEEeCCCCCCCCceeEEEEEeccccccc----cCccceecCcccCCCcccceEEEEEEEEc
Q psy3954 111 VYAYDRDRTSKTDRVLGKVTIQRSDLHRI----SNKEHWFPLTPVTQDSEVQGKIQIGVLST 168 (268)
Q Consensus 111 ~~v~d~d~~~~~d~~iG~~~i~l~~l~~~----~~~~~w~~L~~~~~~~~~~G~i~v~l~~~ 168 (268)
|+|||+| .+++|++||++.|+++++..+ ...+.|++|.+ +|+|++++.+.
T Consensus 103 ~~V~D~d-~~~~dd~iG~~~i~l~~l~~~~~~~~~~~~W~~L~~-------~G~i~l~l~~~ 156 (157)
T 2fk9_A 103 LAVFHET-PLGYDHFVANCTLQFQELLRTTGASDTFEGWVDLEP-------EGKVFVVITLT 156 (157)
T ss_dssp EEEEECC-SSSSCEEEEEEEEEHHHHHHHHTTCSEEEEEEECBS-------SCEEEEEEEEC
T ss_pred EEEEECC-CCCCCCEEEEEEEEHHHhhcccCCCCcccEEEECCC-------CcEEEEEEEEE
Confidence 9999999 789999999999999998854 55789999965 69999998874
No 7
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.87 E-value=1.9e-22 Score=156.32 Aligned_cols=109 Identities=25% Similarity=0.329 Sum_probs=95.1
Q ss_pred cccceEEEEEEEEc--CCeEEEEEceecCCC--CCCCCCCCEEEEEEEecCCcceeeeceeccCCCCCccceEEEEEccC
Q psy3954 155 SEVQGKIQIGVLST--PTSLMVNVNEASGLT--QVNGQCDPTAMVTVHYTHNKSDVQKSKVKKKSHSPVFNESFMFDRSL 230 (268)
Q Consensus 155 ~~~~G~i~v~l~~~--~~~L~v~v~~a~~L~--~~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~~ne~f~f~v~~ 230 (268)
.+..|+|.+++.|. .+.|.|+|++|+||+ +..|.+||||++++..++....+++|+++++++||+|||+|.|.++.
T Consensus 8 ~~~~G~l~~~l~y~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~ 87 (159)
T 1tjx_A 8 LEKLGDICFSLRYVPTAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPF 87 (159)
T ss_dssp GGCCCEEEEEEEEETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCG
T ss_pred cCcCCeEEEEEEEcCCCCEEEEEEEEeeCCCCccCCCCCCeEEEEEEEeCCceeceeeCceecCCCCCcccceEEEEcCH
Confidence 44579999999996 899999999999997 55678999999999854444568999999999999999999999987
Q ss_pred CCCce--EEEEEEecCCC-CCeeeEEEEEeCCccCC
Q psy3954 231 GDPIE--LVVSLHHDISG-LNVFLGEVHIPLNNKET 263 (268)
Q Consensus 231 ~~~~~--l~i~V~d~~~~-~~~~lG~~~l~l~~~~~ 263 (268)
.++.. |.|+|||++.. ++++||++.|++.++..
T Consensus 88 ~~l~~~~l~i~V~d~d~~~~~~~iG~~~i~l~~~~~ 123 (159)
T 1tjx_A 88 EQIQKVQVVVTVLDYDKIGKNDAIGKVFVGYNSTGA 123 (159)
T ss_dssp GGGGGCEEEEEEEECCSSSCCEEEEEEEEETTCCHH
T ss_pred HHhCCcEEEEEEEECCCCCCCceEEEEEECCCCCCc
Confidence 66653 99999999998 89999999999997643
No 8
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.87 E-value=1.9e-22 Score=152.53 Aligned_cols=111 Identities=23% Similarity=0.455 Sum_probs=96.2
Q ss_pred ceEEEEEEEEc--CCeEEEEEceecCCC--CCCCCCCCEEEEEEEecCCcceeeeceeccCCCCCccceEEEEEccCCCC
Q psy3954 158 QGKIQIGVLST--PTSLMVNVNEASGLT--QVNGQCDPTAMVTVHYTHNKSDVQKSKVKKKSHSPVFNESFMFDRSLGDP 233 (268)
Q Consensus 158 ~G~i~v~l~~~--~~~L~v~v~~a~~L~--~~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~~ne~f~f~v~~~~~ 233 (268)
+|+|.+++.|. .+.|.|.|++|++|+ +..|.+||||++++...+....+++|++++++.||+|||+|.|.++..++
T Consensus 2 ~G~l~~sl~y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~~l 81 (138)
T 3n5a_A 2 RGELLLSLCYNPSANSIIVNIIKARNLKAMDIGGTSDPYVKVWLMYKDKRVEKKKTVTKKRNLNPIFNESFAFDIPTEKL 81 (138)
T ss_dssp CCEEEEEEEEETTTTEEEEEEEEEESCCCCBTTTBCCEEEEEEEEETTEEEEEEECCCCSSCSSCEEEEEEEEECCGGGG
T ss_pred CcEEEEEEEEcCCCCeEEEEEEEeeCCCCcCCCCCcCeEEEEEEEeCCCccceEeCccccCCCCCcCcceEEEECChhhc
Confidence 69999999996 899999999999997 55678999999999855445568999999999999999999999987776
Q ss_pred ce--EEEEEEecCCC-CCeeeEEEEEeCCccCCCCCCC
Q psy3954 234 IE--LVVSLHHDISG-LNVFLGEVHIPLNNKETSSSWW 268 (268)
Q Consensus 234 ~~--l~i~V~d~~~~-~~~~lG~~~l~l~~~~~~~~~w 268 (268)
.. |.|+|||++.. ++++||++.|+++++..+..+|
T Consensus 82 ~~~~l~~~V~d~~~~~~~~~lG~~~i~l~~~~~~~~~W 119 (138)
T 3n5a_A 82 RETTIIITVMDKDKLSRNDVIGKIYLSWKSGPGEVKHW 119 (138)
T ss_dssp GGEEEEEEEEECCSSSCCEEEEEEEESSSSCHHHHHHH
T ss_pred CceEEEEEEEECCCCCCCcEEEEEEEccccCChHHHHH
Confidence 43 99999999998 8999999999999865544443
No 9
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.87 E-value=5.2e-22 Score=152.89 Aligned_cols=110 Identities=24% Similarity=0.322 Sum_probs=91.3
Q ss_pred cccceEEEEEEEEc--CCeEEEEEceecCCC--CCCCCCCCEEEEEEEecCCcceeeeceeccCCCCCccceEEEEEccC
Q psy3954 155 SEVQGKIQIGVLST--PTSLMVNVNEASGLT--QVNGQCDPTAMVTVHYTHNKSDVQKSKVKKKSHSPVFNESFMFDRSL 230 (268)
Q Consensus 155 ~~~~G~i~v~l~~~--~~~L~v~v~~a~~L~--~~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~~ne~f~f~v~~ 230 (268)
....|+|.+++.|. .+.|.|.|++|++|+ +..|.+||||++++..++....+++|+++++++||+|||+|.|.+..
T Consensus 13 ~~~~G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~ 92 (153)
T 1w15_A 13 PSGRGELLVSLCYQSTTNTLTVVVLKARHLPKSDVSGLSDPYVKVNLYHAKKRISKKKTHVKKCTPNAVFNELFVFDIPC 92 (153)
T ss_dssp ---CCEEEEEEEEETTTTEEEEEEEEEESCC------CCCEEEEEEEEETTEEEEEEECCCCCSCSSEEEEEEEEEECCS
T ss_pred CccccEEEEEEEEcCCCCEEEEEEEEeECCCCcCCCCCCCeEEEEEEEeCCeEeceEecCcccCCCCCeecceEEEECCH
Confidence 34579999999996 899999999999997 55688999999999854444457899999999999999999999988
Q ss_pred CCCce--EEEEEEecCCC-CCeeeEEEEEeCCccCCC
Q psy3954 231 GDPIE--LVVSLHHDISG-LNVFLGEVHIPLNNKETS 264 (268)
Q Consensus 231 ~~~~~--l~i~V~d~~~~-~~~~lG~~~l~l~~~~~~ 264 (268)
.++.. |.|+|||++.+ ++++||++.|++++...+
T Consensus 93 ~~l~~~~l~v~V~d~d~~~~~~~lG~~~i~l~~~~~~ 129 (153)
T 1w15_A 93 ESLEEISVEFLVLDSERGSRNEVIGRLVLGATAEGSG 129 (153)
T ss_dssp SSSTTEEEEEEEEECCTTSCCEEEEEEEESTTCCSHH
T ss_pred HHhCceEEEEEEEeCCCCCCCcEEEEEEECCCCCchH
Confidence 77643 99999999988 899999999999884433
No 10
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.86 E-value=2.8e-22 Score=154.54 Aligned_cols=107 Identities=20% Similarity=0.161 Sum_probs=92.8
Q ss_pred ccceEEEEEEEEc--CCeEEEEEceecCCC--CCCCCCCCEEEEEEEecCC-cceeeeceeccCCCCCccceEEEEEccC
Q psy3954 156 EVQGKIQIGVLST--PTSLMVNVNEASGLT--QVNGQCDPTAMVTVHYTHN-KSDVQKSKVKKKSHSPVFNESFMFDRSL 230 (268)
Q Consensus 156 ~~~G~i~v~l~~~--~~~L~v~v~~a~~L~--~~~g~~dpyv~v~l~~~~~-~~~~~kT~v~~~t~nP~~ne~f~f~v~~ 230 (268)
...|+|++++.|. .+.|.|.|++|+||+ +.+|.+||||++++..... ...+++|+++++++||+|||+|.|.++.
T Consensus 27 ~~~G~l~~sl~y~~~~~~L~V~Vi~a~~L~~~d~~g~sDPyVkv~l~~~~~~~~~~~kT~v~~~tlnP~wnE~F~f~v~~ 106 (155)
T 2z0u_A 27 VGATRIQIALKYDEKNKQFAILIIQLSNLSALLQQQDQKVNIRVAVLPCSESTTCLFRTRPLDASDTLVFNEVFWVSMSY 106 (155)
T ss_dssp -CCEEEEEEEEEETTTTEEEEEEEEEECGGGTCCSCCSEEEEEEEEESCSCHHHHEEECCCEECCSSEEEEEEEEEECCH
T ss_pred CCcEEEEEEEEEcCCCCEEEEEEEEccCcCCcccCCCCCEEEEEEEecCCCCCccceeCCcCCCCCCCccccEEEEEcCH
Confidence 3479999999996 899999999999997 5678899999999984222 2347999999999999999999999876
Q ss_pred CCCce--EEEEEEecCCC-CCeeeEEEEEeCCccC
Q psy3954 231 GDPIE--LVVSLHHDISG-LNVFLGEVHIPLNNKE 262 (268)
Q Consensus 231 ~~~~~--l~i~V~d~~~~-~~~~lG~~~l~l~~~~ 262 (268)
.++.. |.|+|||++.+ ++++||++.++|+++.
T Consensus 107 ~~l~~~~L~~~V~d~d~~~~~d~iG~~~i~l~~l~ 141 (155)
T 2z0u_A 107 PALHQKTLRVDVCTTDRSHLEECLGGAQISLAEVC 141 (155)
T ss_dssp HHHHHCEEEEEEEEECTTSCEEEEEEEEEECTTSC
T ss_pred HHhCcCEEEEEEEECCCCCCCcEEEEEEEEHHHcc
Confidence 55533 99999999998 9999999999999985
No 11
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.86 E-value=6.1e-22 Score=154.60 Aligned_cols=109 Identities=27% Similarity=0.416 Sum_probs=94.1
Q ss_pred cccceEEEEEEEEc--CCeEEEEEceecCCC--CCCCCCCCEEEEEEEecCCcceeeeceeccCCCCCccceEEEEEccC
Q psy3954 155 SEVQGKIQIGVLST--PTSLMVNVNEASGLT--QVNGQCDPTAMVTVHYTHNKSDVQKSKVKKKSHSPVFNESFMFDRSL 230 (268)
Q Consensus 155 ~~~~G~i~v~l~~~--~~~L~v~v~~a~~L~--~~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~~ne~f~f~v~~ 230 (268)
....|+|.+++.|. .+.|.|.|++|++|+ +..|.+||||++++..++....+++|+++++++||+|||+|.|.+..
T Consensus 20 ~~~~G~l~~~l~y~~~~~~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~ 99 (166)
T 2cm5_A 20 IEERGKILVSLMYSTQQGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFYDIKH 99 (166)
T ss_dssp CCCCCEEEEEEEEETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETC---CCEEECCCCCSCSSCEEEEEEEEECCG
T ss_pred cCccceEEEEEEEECCCCEEEEEEEEeECCCCccCCCCCCcEEEEEEECCCCccceEeCCcccCCCCCcccceEEEEcch
Confidence 45689999999996 899999999999997 55788999999999844444568999999999999999999999987
Q ss_pred CCCce--EEEEEEecCCC-CCeeeEEEEEeCCccCC
Q psy3954 231 GDPIE--LVVSLHHDISG-LNVFLGEVHIPLNNKET 263 (268)
Q Consensus 231 ~~~~~--l~i~V~d~~~~-~~~~lG~~~l~l~~~~~ 263 (268)
.++.. |.|+|||++.. ++++||++.|++.++..
T Consensus 100 ~~l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~~~~ 135 (166)
T 2cm5_A 100 SDLAKKSLDISVWDYDIGKSNDYIGGCQLGISAKGE 135 (166)
T ss_dssp GGGGGCEEEEEEEECCSSSCCEEEEEEEEETTCCHH
T ss_pred HhcCCCEEEEEEEECCCCCCCcEEEeEEEecccCCc
Confidence 66643 99999999998 89999999999998654
No 12
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.86 E-value=4.6e-21 Score=151.00 Aligned_cols=116 Identities=17% Similarity=0.280 Sum_probs=96.7
Q ss_pred CCCeEEEEEEEcccCccc--cCCCCCC-ceE-----------EEeeecccCCCCCCccCcEEEEEecCCCcEEEEEEEeC
Q psy3954 51 QDLGTLRIRIQYTADHIL--QPHYYED-LCT-----------QILNSPSVNPVTSPFFGEEFQFDIPRRFRHLAVYAYDR 116 (268)
Q Consensus 51 ~~~~~L~V~v~~~a~~L~--~~~~~~d-yv~-----------~~~~T~~~~~t~nP~wne~f~f~v~~~~~~l~~~v~d~ 116 (268)
...+.|.|+|+ +|++|+ +..+.+| ||+ ..++|+++++++||+|||+|.|.+......|.|+|||.
T Consensus 5 ~~~g~L~V~v~-~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~v~~~~~~L~~~V~d~ 83 (176)
T 3m7f_B 5 DDTRVVRVKVI-AGIGLAKKDILGASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFRVLPQRHRILFEVFDE 83 (176)
T ss_dssp TTCEEEEEEEE-EEESCC---CCCCCCEEEEEEEEETTTEEEEEEECCCCSSCSSCEEEEEEEEEECTTTCEEEEEEEEC
T ss_pred CCcEEEEEEEE-EeeCCCCcCCCCCcCcEEEEEEECCCCCcccceeCceECCCCCCcccceEEEEEcCCCCEEEEEEEEC
Confidence 44789999999 999998 7788999 998 25799999999999999999999988788999999999
Q ss_pred CCCCCCCceeEEEEEeccccccccCc-c-----ceecCcccCCCcccceEEEEEEEEc
Q psy3954 117 DRTSKTDRVLGKVTIQRSDLHRISNK-E-----HWFPLTPVTQDSEVQGKIQIGVLST 168 (268)
Q Consensus 117 d~~~~~d~~iG~~~i~l~~l~~~~~~-~-----~w~~L~~~~~~~~~~G~i~v~l~~~ 168 (268)
+ .+++|++||++.++|.++...... + .|++|.+........|+|++++.|.
T Consensus 84 d-~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~l~~~ 140 (176)
T 3m7f_B 84 N-RLTRDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHPRSHKSRVKGYLRLKMTYL 140 (176)
T ss_dssp C-----CEEEEEEEEESCSCCBC------CCCCEEEECBCSSTTCCCCSEEEEEEEEC
T ss_pred C-CCCCCcEEEEEEEEHHHccccCCcccccccccEEEccccCCCCccCEEEEEEEEEE
Confidence 9 788999999999999999865432 2 7999998776666789999999986
No 13
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.86 E-value=4.1e-21 Score=145.30 Aligned_cols=107 Identities=17% Similarity=0.162 Sum_probs=93.1
Q ss_pred cccceEEEEEEEEc--CCeEEEEEceecCCCCCCCCCCCEEEEEEEecCCcceeeeceeccCCCCCccceEEEEEccCCC
Q psy3954 155 SEVQGKIQIGVLST--PTSLMVNVNEASGLTQVNGQCDPTAMVTVHYTHNKSDVQKSKVKKKSHSPVFNESFMFDRSLGD 232 (268)
Q Consensus 155 ~~~~G~i~v~l~~~--~~~L~v~v~~a~~L~~~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~~ne~f~f~v~~~~ 232 (268)
....|+|++++.|. .+.|.|.|++|++ .+..|.+||||++++.++. ...+++|+++++++||+|||+|.|.++..+
T Consensus 9 ~~~~G~l~~sl~y~~~~~~L~V~v~~a~~-~d~~g~sDPyv~v~l~~~~-~~~~~kT~v~~~tlnP~wnE~f~f~v~~~~ 86 (138)
T 1wfm_A 9 WNQAPKLHYCLDYDCQKAELFVTRLEAVT-SNHDGGCDCYVQGSVANRT-GSVEAQTALKKRQLHTTWEEGLVLPLAEEE 86 (138)
T ss_dssp CSSCCEEEEEEEEETTTTEEEEEEEEEEC-CCCSSCCCEEEEEEEEETT-EEEEEECCCCCCCSSEECSSCEEEECCTTS
T ss_pred CCcceEEEEEEEEeCCCCEEEEEEEEEEc-CCCCCCcceEEEEEEEcCC-CcccEecccCcCCCCCcCCceEEEEecHHH
Confidence 34579999999997 8899999999995 4677889999999997422 245789999999999999999999998777
Q ss_pred Cce--EEEEEEecCCC-CCeeeEEEEEeCCccCC
Q psy3954 233 PIE--LVVSLHHDISG-LNVFLGEVHIPLNNKET 263 (268)
Q Consensus 233 ~~~--l~i~V~d~~~~-~~~~lG~~~l~l~~~~~ 263 (268)
+.. |.|+|||++.+ ++++||++.++|.++..
T Consensus 87 l~~~~L~~~V~d~d~~~~dd~lG~~~i~l~~l~~ 120 (138)
T 1wfm_A 87 LPTATLTLTLRTCDRFSRHSVAGELRLGLDGTSV 120 (138)
T ss_dssp STTCEEEEEEEECCSSCTTSCSEEEEEESSSSSS
T ss_pred cCCCEEEEEEEECCCCCCCcEEEEEEEEcccccC
Confidence 653 99999999998 99999999999999964
No 14
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.86 E-value=1.3e-21 Score=147.60 Aligned_cols=114 Identities=21% Similarity=0.250 Sum_probs=99.5
Q ss_pred cCCCeEEEEEEEcccCccc--cCCCCCC-ceE-----EEeeecccC-CCCCCccCcEEEEEecCCCcEEEEEEEeCCCCC
Q psy3954 50 IQDLGTLRIRIQYTADHIL--QPHYYED-LCT-----QILNSPSVN-PVTSPFFGEEFQFDIPRRFRHLAVYAYDRDRTS 120 (268)
Q Consensus 50 ~~~~~~L~V~v~~~a~~L~--~~~~~~d-yv~-----~~~~T~~~~-~t~nP~wne~f~f~v~~~~~~l~~~v~d~d~~~ 120 (268)
....+.|.|+|+ +|++|+ +..+.+| ||+ +.+||++++ +++||+|||+|.|.+......|.|+|||++ .+
T Consensus 6 ~~~~~~L~v~v~-~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~~~~nP~Wne~f~f~v~~~~~~l~~~V~d~~-~~ 83 (136)
T 1wfj_A 6 SGPHGTLEVVLV-SAKGLEDADFLNNMDPYVQLTCRTQDQKSNVAEGMGTTPEWNETFIFTVSEGTTELKAKIFDKD-VG 83 (136)
T ss_dssp CCCEEEEEEEEE-EEEECSSCCSSCSSCCCEEEESSSCEEECCCCTTCCSSCEEEEEEEEEEESSCCEEEEEECCSS-SC
T ss_pred CCCcEEEEEEEE-eccCCCCcccCCCcCceEEEEECCccceeEeccCCCCCCccCcEEEEEECCCCCEEEEEEEECC-CC
Confidence 345789999999 999999 6678899 999 678999998 899999999999999887889999999999 78
Q ss_pred CCCceeEEEEEeccccc-cccCccceecCcccCCCcccceEEEEEEEEc
Q psy3954 121 KTDRVLGKVTIQRSDLH-RISNKEHWFPLTPVTQDSEVQGKIQIGVLST 168 (268)
Q Consensus 121 ~~d~~iG~~~i~l~~l~-~~~~~~~w~~L~~~~~~~~~~G~i~v~l~~~ 168 (268)
++|++||++.+++.++. .+.....|++|. ......|+|++++.|.
T Consensus 84 ~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~---~~~~~~G~i~l~l~~~ 129 (136)
T 1wfj_A 84 TEDDAVGEATIPLEPVFVEGSIPPTAYNVV---KDEEYKGEIWVALSFK 129 (136)
T ss_dssp TTTCCSEEEEEESHHHHHHSEEEEEEEEEE---ETTEEEEEEEEEEEEE
T ss_pred CCCceEEEEEEEHHHhccCCCCCcEEEEee---cCCccCEEEEEEEEEE
Confidence 89999999999999984 444467899997 2345689999999885
No 15
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.86 E-value=4.1e-21 Score=145.28 Aligned_cols=108 Identities=28% Similarity=0.337 Sum_probs=93.3
Q ss_pred cccceEEEEEEEEc--CCeEEEEEceecCCC--CCC-CCCCCEEEEEEEecCCcceeeeceeccCCCCCccceEEEEE-c
Q psy3954 155 SEVQGKIQIGVLST--PTSLMVNVNEASGLT--QVN-GQCDPTAMVTVHYTHNKSDVQKSKVKKKSHSPVFNESFMFD-R 228 (268)
Q Consensus 155 ~~~~G~i~v~l~~~--~~~L~v~v~~a~~L~--~~~-g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~~ne~f~f~-v 228 (268)
....|+|.+++.|. .+.|.|.|++|++|+ +.. |.+||||++++..+ ...+++|+++++++||+|||+|.|. +
T Consensus 5 ~~~~G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~~~~~dpyv~v~~~~~--~~~~~kT~v~~~t~nP~wne~f~f~~v 82 (138)
T 1ugk_A 5 SSGLGTLFFSLEYNFERKAFVVNIKEARGLPAMDEQSMTSDPYIKMTILPE--KKHKVKTRVLRKTLDPAFDETFTFYGI 82 (138)
T ss_dssp CCCCCEEEEEEEEEGGGTEEEEEEEEEESCCCCBTTTTBCEEEEEEEEETT--TCSEEECCCCSSCSSCEEEEEEEEECC
T ss_pred CCccEEEEEEEEEECCCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEecC--CCceEecCcCcCCCCCcEeeEEEEcCc
Confidence 34579999999995 899999999999997 443 77999999999832 2368999999999999999999996 7
Q ss_pred cCCCCce--EEEEEEecCCC-CCeeeEEEEEeCCccCCC
Q psy3954 229 SLGDPIE--LVVSLHHDISG-LNVFLGEVHIPLNNKETS 264 (268)
Q Consensus 229 ~~~~~~~--l~i~V~d~~~~-~~~~lG~~~l~l~~~~~~ 264 (268)
+..++.. |.|+|||++.+ ++++||++.++|.++..+
T Consensus 83 ~~~~~~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~ 121 (138)
T 1ugk_A 83 PYTQIQELALHFTILSFDRFSRDDIIGEVLIPLSGIELS 121 (138)
T ss_dssp CSTTGGGCEEEEEEEEECSSCCCCCCEEEEEECTTCCCT
T ss_pred CHHHhccCEEEEEEEECCCCCCCcEEEEEEEehhHccCC
Confidence 7666643 99999999988 899999999999999763
No 16
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.86 E-value=2.9e-21 Score=144.35 Aligned_cols=107 Identities=20% Similarity=0.299 Sum_probs=89.0
Q ss_pred cceEEEEEEEEc--CCeEEEEEceecCCC--CCCCCCCCEEEEEEEecCCcceeeeceeccCCCCCccceEEEEEc-cCC
Q psy3954 157 VQGKIQIGVLST--PTSLMVNVNEASGLT--QVNGQCDPTAMVTVHYTHNKSDVQKSKVKKKSHSPVFNESFMFDR-SLG 231 (268)
Q Consensus 157 ~~G~i~v~l~~~--~~~L~v~v~~a~~L~--~~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~~ne~f~f~v-~~~ 231 (268)
..|+|.+++.|. .+.|.|+|++|++|+ +..|.+||||++++..++....+++|+++++++||+|||+|.|.+ +..
T Consensus 3 ~~G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~ 82 (129)
T 2bwq_A 3 LSGQLSIKLWFDKVGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRR 82 (129)
T ss_dssp CCCEEEEEEEEETTTTEEEEEEEEEESCCCCTTSCCBCEEEEEEEESSCSGGGEEECCCCSSBSSCEEEEEEEECSCCGG
T ss_pred eeEEEEEEEEEccCCCEEEEEEEEeeCCCCCCCCCCCCCEEEEEEecCCCCCcceecccccCCCCCccccEEEEccCCHH
Confidence 469999999998 789999999999997 556779999999998554456789999999999999999999984 433
Q ss_pred CCc--eEEEEEEecCCC-C--CeeeEEEEEeCCccCC
Q psy3954 232 DPI--ELVVSLHHDISG-L--NVFLGEVHIPLNNKET 263 (268)
Q Consensus 232 ~~~--~l~i~V~d~~~~-~--~~~lG~~~l~l~~~~~ 263 (268)
++. .|.|+|||++.. + +++||++.+++.++..
T Consensus 83 ~~~~~~l~~~V~d~d~~~~~~~~~lG~~~i~l~~l~~ 119 (129)
T 2bwq_A 83 EFRERMLEITLWDQARVREEESEFLGEILIELETALL 119 (129)
T ss_dssp GGGGCEEEEEEEEC-------CEEEEEEEEEGGGCCC
T ss_pred HhcCCeEEEEEEECCcCcCcCCceeEEEEEEccccCC
Confidence 333 399999999988 5 9999999999999865
No 17
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.85 E-value=4e-21 Score=145.04 Aligned_cols=107 Identities=25% Similarity=0.319 Sum_probs=94.6
Q ss_pred cceEEEEEEEEcCCeEEEEEceecCCC--CCCCCCCCEEEEEEEecCCcceeeeceeccCCCCCccceEEEEEccCCCCc
Q psy3954 157 VQGKIQIGVLSTPTSLMVNVNEASGLT--QVNGQCDPTAMVTVHYTHNKSDVQKSKVKKKSHSPVFNESFMFDRSLGDPI 234 (268)
Q Consensus 157 ~~G~i~v~l~~~~~~L~v~v~~a~~L~--~~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~~ne~f~f~v~~~~~~ 234 (268)
..|+|.+++.|..+.|.|.|++|++|+ +..|.+||||++.+..++....+++|++++++.||.|||+|.|.+...+..
T Consensus 3 ~~G~l~~~l~~~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~ 82 (137)
T 3rdl_A 3 KRGRIYLKAEVTDEKLHVTVRDAKNLIPMDPNGLSDPYVKLKLIPDPKNESKQKTKTIRSTLNPQWNESFTFKLKPSDKD 82 (137)
T ss_dssp CCCEEEEEEEEETTEEEEEEEEEESCCCCSTTSCCCEEEEEEEECCTTCCCCEECCCCCSCSSCEEEEEEEEECCGGGGG
T ss_pred cceEEEEEEEEcCCEEEEEEEEeeCCCCCCCCCCCCeeEEEEEEcCCCCCeeecCceEcCCCCCCcccEEEEEcCchhcC
Confidence 479999999999999999999999997 567789999999997544456789999999999999999999998765555
Q ss_pred e-EEEEEEecCCC-CCeeeEEEEEeCCccCC
Q psy3954 235 E-LVVSLHHDISG-LNVFLGEVHIPLNNKET 263 (268)
Q Consensus 235 ~-l~i~V~d~~~~-~~~~lG~~~l~l~~~~~ 263 (268)
. |.|+|||++.. ++++||++.++++++..
T Consensus 83 ~~l~i~v~d~d~~~~~~~iG~~~i~l~~l~~ 113 (137)
T 3rdl_A 83 RRLSVEIWDWDRTTRNDFMGSLSFGVSELMK 113 (137)
T ss_dssp CEEEEEEEECCSSSCCEEEEEEEEEHHHHHH
T ss_pred CEEEEEEEECCCCCCCceEEEEEEeHHHhcc
Confidence 4 99999999988 89999999999988743
No 18
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.85 E-value=7.9e-21 Score=144.00 Aligned_cols=113 Identities=18% Similarity=0.262 Sum_probs=97.8
Q ss_pred CCeEEEEEEEcccCccc--cCCCCCC-ceE-----EEeeecccCCCCCCccCcEEEEEecCC----CcEEEEEEEeCCCC
Q psy3954 52 DLGTLRIRIQYTADHIL--QPHYYED-LCT-----QILNSPSVNPVTSPFFGEEFQFDIPRR----FRHLAVYAYDRDRT 119 (268)
Q Consensus 52 ~~~~L~V~v~~~a~~L~--~~~~~~d-yv~-----~~~~T~~~~~t~nP~wne~f~f~v~~~----~~~l~~~v~d~d~~ 119 (268)
..+.|.|+|+ +|++|+ +. +.+| ||+ +++||+++++++||+|||+|.|.+... ...|.|+|||+| .
T Consensus 5 ~~g~L~v~v~-~a~~L~~~~~-g~~dpyv~v~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~~l~i~V~d~d-~ 81 (140)
T 2dmh_A 5 SSGMLRVIVE-SASNIPKTKF-GKPDPIVSVIFKDEKKKTKKVDNELNPVWNEILEFDLRGIPLDFSSSLGIIVKDFE-T 81 (140)
T ss_dssp BCCEEEEEEE-EEESCCCCSS-SCCCEEEEEECSSCEEECCCCCSCSSCEEEEEEEEECSSCCCCTTCEEEEEEEETT-C
T ss_pred CCcEEEEEEE-EeeCCCCCCC-CCCCeEEEEEECCEeEEeeeecCCCCCccCcEEEEEecccccCCCCEEEEEEEECC-C
Confidence 3689999999 999999 56 8999 999 789999999999999999999998753 689999999999 7
Q ss_pred CCCCceeEEEEEeccccccccCccceec---CcccCCCcccceEEEEEEEEc
Q psy3954 120 SKTDRVLGKVTIQRSDLHRISNKEHWFP---LTPVTQDSEVQGKIQIGVLST 168 (268)
Q Consensus 120 ~~~d~~iG~~~i~l~~l~~~~~~~~w~~---L~~~~~~~~~~G~i~v~l~~~ 168 (268)
+++|++||++.+++.++..+...+.|++ |.... .....|+|++++.|.
T Consensus 82 ~~~~~~lG~~~i~l~~l~~~~~~~~w~~l~~l~~~~-~~~~~G~l~l~~~~~ 132 (140)
T 2dmh_A 82 IGQNKLIGTATVALKDLTGDQSRSLPYKLISLLNEK-GQDTGATIDLVIGYD 132 (140)
T ss_dssp SSSCCCCEEEEEEGGGTCSSSCEEEEEEEEEEECTT-CCEEEEEEEEEEEEC
T ss_pred CCCCceEEEEEEEHHHhccCCCceeEEeeeeccCCC-CCCCCCEEEEEEEEE
Confidence 8899999999999999987777888988 44332 234579999999986
No 19
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.85 E-value=1.4e-21 Score=148.49 Aligned_cols=111 Identities=23% Similarity=0.368 Sum_probs=94.8
Q ss_pred cccceEEEEEEEEc--CCeEEEEEceecCCC--CCCCCCCCEEEEEEEecCCcceeeeceeccCCCCCccceEEEEE-cc
Q psy3954 155 SEVQGKIQIGVLST--PTSLMVNVNEASGLT--QVNGQCDPTAMVTVHYTHNKSDVQKSKVKKKSHSPVFNESFMFD-RS 229 (268)
Q Consensus 155 ~~~~G~i~v~l~~~--~~~L~v~v~~a~~L~--~~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~~ne~f~f~-v~ 229 (268)
....|+|.+++.|. .+.|.|+|++|++|+ +..|.+||||++++..++....+++|+++++++||+|||+|.|. ++
T Consensus 12 ~~~~G~l~~~l~y~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~ 91 (142)
T 2chd_A 12 ATTLGALEFSLLYDQDNSNLQCTIIRAKGLKPMDSNGLADPYVKLHLLPGASKSNKLRTKTLRNTRNPVWNETLQYHGIT 91 (142)
T ss_dssp --CCCEEEEEEEEEGGGTEEEEEEEEEESCCCCCTTSCCCEEEEEEEESCCSGGGEEECCCCCSCSSCEEEEEEEEESCC
T ss_pred CCccceEEEEEEEeCCCCEEEEEEEEecCCCCCCCCCCCCCEEEEEEEcCCCCcceeeCCcCCCCCCCcCcCEEEEcccC
Confidence 44579999999995 999999999999997 45678999999999854445678999999999999999999998 65
Q ss_pred CCCCc--eEEEEEEecCCC-CCeeeEEEEEeCCccCCCC
Q psy3954 230 LGDPI--ELVVSLHHDISG-LNVFLGEVHIPLNNKETSS 265 (268)
Q Consensus 230 ~~~~~--~l~i~V~d~~~~-~~~~lG~~~l~l~~~~~~~ 265 (268)
..++. .|.|+|||++.. ++++||++.++++++..+.
T Consensus 92 ~~~~~~~~l~i~V~d~d~~~~d~~iG~~~i~l~~l~~~~ 130 (142)
T 2chd_A 92 EEDMQRKTLRISVCDEDKFGHNEFIGETRFSLKKLKANQ 130 (142)
T ss_dssp HHHHHHCEEEEEEEEECTTSCEEEEEEEEEEGGGCCTTC
T ss_pred HHHccCCEEEEEEEECCCCCCCcEEEEEEEEHHHcCCCC
Confidence 54443 399999999998 8999999999999997643
No 20
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.85 E-value=3.1e-21 Score=147.73 Aligned_cols=109 Identities=21% Similarity=0.334 Sum_probs=95.9
Q ss_pred cccceEEEEEEEEc--CCeEEEEEceecCCC--C-CCCCCCCEEEEEEEecCCcceeeeceeccCCCCCccceEEEEEcc
Q psy3954 155 SEVQGKIQIGVLST--PTSLMVNVNEASGLT--Q-VNGQCDPTAMVTVHYTHNKSDVQKSKVKKKSHSPVFNESFMFDRS 229 (268)
Q Consensus 155 ~~~~G~i~v~l~~~--~~~L~v~v~~a~~L~--~-~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~~ne~f~f~v~ 229 (268)
.+..|+|.+++.|. .+.|.|.|++|++|+ + ..|.+||||++++..++....+++|+++++++||+|||+|.|.++
T Consensus 6 ~~~~G~l~~sl~y~~~~~~L~V~v~~a~~L~~~d~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~ 85 (148)
T 3fdw_A 6 IFVTGRIAFSLKYEQQTQSLVVHVKECHQLAYADEAKKRSNPYVKTYLLPDKSRQGKRKTSIKRDTVNPLYDETLRYEIP 85 (148)
T ss_dssp CCCCCEEEEEEEEETTTTEEEEEEEEEESCCCSBTTTTBCCEEEEEEEETCCSGGGEEECCCCSSCSSCEEEEEEEEECC
T ss_pred CccceEEEEEEEEeCCCCEEEEEEEEecCCCCcccCCCCCCeEEEEEEEcCCcccCccccccCCCCCCCcEeeEEEEEeC
Confidence 45689999999998 789999999999997 3 467799999999985554466899999999999999999999998
Q ss_pred CCCCce--EEEEEEecCCC-CCeeeEEEEEeCCccCC
Q psy3954 230 LGDPIE--LVVSLHHDISG-LNVFLGEVHIPLNNKET 263 (268)
Q Consensus 230 ~~~~~~--l~i~V~d~~~~-~~~~lG~~~l~l~~~~~ 263 (268)
..++.. |.|+|||++.. ++++||++.++|+++..
T Consensus 86 ~~~~~~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~~ 122 (148)
T 3fdw_A 86 ESLLAQRTLQFSVWHHGRFGRNTFLGEAEIQMDSWKL 122 (148)
T ss_dssp STTGGGCEEEEEEEEECGGGCEEEEEEEEEEHHHHHH
T ss_pred hhHhCceEEEEEEEECCCCcCCcEEEEEEEEcccccc
Confidence 877654 99999999988 89999999999988754
No 21
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.85 E-value=3.4e-21 Score=147.68 Aligned_cols=110 Identities=26% Similarity=0.311 Sum_probs=95.7
Q ss_pred cccceEEEEEEEEcCCeEEEEEceecCCC--CCCCCCCCEEEEEEEecCCcceeeeceeccCCCCCccceEEEEEccCCC
Q psy3954 155 SEVQGKIQIGVLSTPTSLMVNVNEASGLT--QVNGQCDPTAMVTVHYTHNKSDVQKSKVKKKSHSPVFNESFMFDRSLGD 232 (268)
Q Consensus 155 ~~~~G~i~v~l~~~~~~L~v~v~~a~~L~--~~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~~ne~f~f~v~~~~ 232 (268)
.+..|+|.+++.|..+.|.|+|++|++|+ +..|.+||||++++..++....+++|+++++++||+|||+|.|.+...+
T Consensus 16 ~~~~G~l~~~l~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~ 95 (149)
T 1a25_A 16 MERRGRIYIQAHIDREVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQLKESD 95 (149)
T ss_dssp -CTTCEEEEEEEESSSEEEEEEEEEESCCCCSTTSCCCEEEEEEEESCTTCSSCEECCCCSSCSSCEEEEEEEEECCSGG
T ss_pred CCcceEEEEEEEecCCEEEEEEEEeeCCCCCCCCCCcCeEEEEEEECCCCCcceEecceeCCCCCCcCCcEEEEEecccc
Confidence 34479999999999999999999999997 5567899999999985444456899999999999999999999987655
Q ss_pred Cce-EEEEEEecCCC-CCeeeEEEEEeCCccCCC
Q psy3954 233 PIE-LVVSLHHDISG-LNVFLGEVHIPLNNKETS 264 (268)
Q Consensus 233 ~~~-l~i~V~d~~~~-~~~~lG~~~l~l~~~~~~ 264 (268)
+.. |.|+|||++.. ++++||++.|++.++..+
T Consensus 96 ~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~ 129 (149)
T 1a25_A 96 KDRRLSVEIWDWDLTSRNDFMGSLSFGISELQKA 129 (149)
T ss_dssp GGCEEEEEEEECCSSSCCEEEEEEEEEHHHHTTC
T ss_pred CCCEEEEEEEECCCCCCCCEEEEEEEEHHHhCcC
Confidence 544 99999999998 899999999999988653
No 22
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.85 E-value=1.3e-21 Score=150.82 Aligned_cols=112 Identities=15% Similarity=0.193 Sum_probs=98.2
Q ss_pred ccceEEEeeeeeeccCcccccccccccCCCeEEEEEEEcccCccc--cCCCCCC-ceE-----------EEeeecccCCC
Q psy3954 24 TYKLMVKHTAYKYYLQPRKRLTANQIIQDLGTLRIRIQYTADHIL--QPHYYED-LCT-----------QILNSPSVNPV 89 (268)
Q Consensus 24 ~~~l~~~~~~~~y~~~p~~~~~~~~~~~~~~~L~V~v~~~a~~L~--~~~~~~d-yv~-----------~~~~T~~~~~t 89 (268)
...+|.++.++.|... .+.|.|+|+ +|++|+ +.+|.+| ||+ .++||+++++|
T Consensus 26 ~~~~G~l~~sl~y~~~-------------~~~L~V~Vi-~a~~L~~~d~~g~sDPyVkv~l~~~~~~~~~~~kT~v~~~t 91 (155)
T 2z0u_A 26 AVGATRIQIALKYDEK-------------NKQFAILII-QLSNLSALLQQQDQKVNIRVAVLPCSESTTCLFRTRPLDAS 91 (155)
T ss_dssp --CCEEEEEEEEEETT-------------TTEEEEEEE-EEECGGGTCCSCCSEEEEEEEEESCSCHHHHEEECCCEECC
T ss_pred cCCcEEEEEEEEEcCC-------------CCEEEEEEE-EccCcCCcccCCCCCEEEEEEEecCCCCCccceeCCcCCCC
Confidence 3467999999999876 789999999 999999 7789999 999 16899999999
Q ss_pred CCCccCcEEEEEecCC---CcEEEEEEEeCCCCCCCCceeEEEEEeccccc-cccCccceecCcc
Q psy3954 90 TSPFFGEEFQFDIPRR---FRHLAVYAYDRDRTSKTDRVLGKVTIQRSDLH-RISNKEHWFPLTP 150 (268)
Q Consensus 90 ~nP~wne~f~f~v~~~---~~~l~~~v~d~d~~~~~d~~iG~~~i~l~~l~-~~~~~~~w~~L~~ 150 (268)
+||+|||+|.|.++.. ...|.|+|||+| .++++++||++.++|+++. .......|++|.+
T Consensus 92 lnP~wnE~F~f~v~~~~l~~~~L~~~V~d~d-~~~~~d~iG~~~i~l~~l~~~~~~~~~W~~L~~ 155 (155)
T 2z0u_A 92 DTLVFNEVFWVSMSYPALHQKTLRVDVCTTD-RSHLEECLGGAQISLAEVCRSGERSTRWYNLLS 155 (155)
T ss_dssp SSEEEEEEEEEECCHHHHHHCEEEEEEEEEC-TTSCEEEEEEEEEECTTSCTTCCCEEEEEEEBC
T ss_pred CCCccccEEEEEcCHHHhCcCEEEEEEEECC-CCCCCcEEEEEEEEHHHccCCCCccccceEccC
Confidence 9999999999998764 578999999999 7889999999999999996 3567789998864
No 23
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.85 E-value=1.2e-20 Score=142.77 Aligned_cols=115 Identities=11% Similarity=0.011 Sum_probs=100.5
Q ss_pred cccceEEEeeeeeeccCcccccccccccCCCeEEEEEEEcccCccccCCCCCC-ceE---------EEeeecccCCCCCC
Q psy3954 23 ATYKLMVKHTAYKYYLQPRKRLTANQIIQDLGTLRIRIQYTADHILQPHYYED-LCT---------QILNSPSVNPVTSP 92 (268)
Q Consensus 23 ~~~~l~~~~~~~~y~~~p~~~~~~~~~~~~~~~L~V~v~~~a~~L~~~~~~~d-yv~---------~~~~T~~~~~t~nP 92 (268)
+.-.+|.++.+++|... .+.|.|+|+ +|++ .+..|.+| ||+ ..+||+++++|+||
T Consensus 8 s~~~~G~l~~sl~y~~~-------------~~~L~V~v~-~a~~-~d~~g~sDPyv~v~l~~~~~~~~~kT~v~~~tlnP 72 (138)
T 1wfm_A 8 SWNQAPKLHYCLDYDCQ-------------KAELFVTRL-EAVT-SNHDGGCDCYVQGSVANRTGSVEAQTALKKRQLHT 72 (138)
T ss_dssp CCSSCCEEEEEEEEETT-------------TTEEEEEEE-EEEC-CCCSSCCCEEEEEEEEETTEEEEEECCCCCCCSSE
T ss_pred CCCcceEEEEEEEEeCC-------------CCEEEEEEE-EEEc-CCCCCCcceEEEEEEEcCCCcccEecccCcCCCCC
Confidence 34467899999999876 789999999 9994 26788999 998 26899999999999
Q ss_pred ccCcEEEEEecCC---CcEEEEEEEeCCCCCCCCceeEEEEEeccccccccCccceecCcccCC
Q psy3954 93 FFGEEFQFDIPRR---FRHLAVYAYDRDRTSKTDRVLGKVTIQRSDLHRISNKEHWFPLTPVTQ 153 (268)
Q Consensus 93 ~wne~f~f~v~~~---~~~l~~~v~d~d~~~~~d~~iG~~~i~l~~l~~~~~~~~w~~L~~~~~ 153 (268)
+|||+|.|.++.. ...|.|+|||+| .+++|++||++.++|.++......+.|++|.+...
T Consensus 73 ~wnE~f~f~v~~~~l~~~~L~~~V~d~d-~~~~dd~lG~~~i~l~~l~~~~~~~~W~~L~~~~~ 135 (138)
T 1wfm_A 73 TWEEGLVLPLAEEELPTATLTLTLRTCD-RFSRHSVAGELRLGLDGTSVPLGAAQWGELKTSGP 135 (138)
T ss_dssp ECSSCEEEECCTTSSTTCEEEEEEEECC-SSCTTSCSEEEEEESSSSSSCTTCCEEEECCCCSC
T ss_pred cCCceEEEEecHHHcCCCEEEEEEEECC-CCCCCcEEEEEEEEcccccCcccccceeeCcCCCc
Confidence 9999999998765 578999999999 78999999999999999987777889999987653
No 24
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.85 E-value=3.2e-21 Score=147.48 Aligned_cols=112 Identities=21% Similarity=0.389 Sum_probs=94.6
Q ss_pred cccceEEEEEEEEc--CCeEEEEEceecCCCC---CC------CCCCCEEEEEEEecCCcceeeeceeccCCCCCccceE
Q psy3954 155 SEVQGKIQIGVLST--PTSLMVNVNEASGLTQ---VN------GQCDPTAMVTVHYTHNKSDVQKSKVKKKSHSPVFNES 223 (268)
Q Consensus 155 ~~~~G~i~v~l~~~--~~~L~v~v~~a~~L~~---~~------g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~~ne~ 223 (268)
....|+|.+++.|. .+.|.|+|++|++|+. .+ |.+||||++++..++ ..+++|+++++++||+|||+
T Consensus 9 ~~~~G~l~~~l~y~~~~~~L~V~v~~a~~L~~~~d~~g~~~~~~~~dpyv~v~l~~~~--~~~~kT~v~~~t~nP~wne~ 86 (147)
T 2enp_A 9 KYQLGMLHFSTQYDLLHNHLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICLLPDQ--KNSKQTGVKRKTQKPVFEER 86 (147)
T ss_dssp CCCCCEEEEEEEEETTTTEEEEEEEEEECCCCSCSSCCSSCTTCCCCCEEEEEEETCC--SSCEECCCCCSCSSCCCCBC
T ss_pred CCcceEEEEEEEEcCCCCEEEEEEEEEeCCCCccccccccccCCCCCcEEEEEEEeCC--CcceEeecccCCCCCeEeee
Confidence 45689999999998 8999999999999974 23 469999999998432 34789999999999999999
Q ss_pred EEEEccCCCCc--eEEEEEEecCCC-CCeeeEEEEEeCCccCCC--CCCC
Q psy3954 224 FMFDRSLGDPI--ELVVSLHHDISG-LNVFLGEVHIPLNNKETS--SSWW 268 (268)
Q Consensus 224 f~f~v~~~~~~--~l~i~V~d~~~~-~~~~lG~~~l~l~~~~~~--~~~w 268 (268)
|.|.+...++. .|.|+|||++.+ ++++||++.|+|.++..+ ..||
T Consensus 87 f~f~v~~~~l~~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~w 136 (147)
T 2enp_A 87 YTFEIPFLEAQRRTLLLTVVDFDKFSRHCVIGKVSVPLCEVDLVKGGHWW 136 (147)
T ss_dssp CEECCCHHHHHHSEEEEEEECCSTTCCSCCCEEEEEETTTSCTTTCCCEE
T ss_pred EEEEeChHHhccCEEEEEEEECCCCcCCcEEEEEEEechhcCCCCCccEE
Confidence 99998765544 399999999988 899999999999998663 4465
No 25
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.85 E-value=3.9e-21 Score=146.27 Aligned_cols=111 Identities=20% Similarity=0.279 Sum_probs=99.9
Q ss_pred cceEEEeeeeeeccCcccccccccccCCCeEEEEEEEcccCccc--cCCCCCC-ceE--------EEeeecccCCCCCCc
Q psy3954 25 YKLMVKHTAYKYYLQPRKRLTANQIIQDLGTLRIRIQYTADHIL--QPHYYED-LCT--------QILNSPSVNPVTSPF 93 (268)
Q Consensus 25 ~~l~~~~~~~~y~~~p~~~~~~~~~~~~~~~L~V~v~~~a~~L~--~~~~~~d-yv~--------~~~~T~~~~~t~nP~ 93 (268)
-.+|.++.++.|... .+.|.|+|+ +|++|+ +..+.+| ||+ ..++|+++++++||+
T Consensus 18 ~~~G~l~~~l~y~~~-------------~~~L~v~v~-~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~ 83 (143)
T 3f04_A 18 EKLGKLQYSLDYDFQ-------------NNQLLVGII-QAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPV 83 (143)
T ss_dssp CCCCEEEEEEEEETT-------------TTEEEEEEE-EEECCCCBGGGBCCCEEEEEEEESCCSCCEECCCCCSCSSCE
T ss_pred cCeEEEEEEEEEeCC-------------CCEEEEEEE-EecCCCCCCCCCCcCcEEEEEEECCCCccEECccCcCCCCCc
Confidence 457889999888876 789999999 999999 6788999 998 478999999999999
Q ss_pred cCcEEEEEecCC---CcEEEEEEEeCCCCCCCCceeEEEEEeccccccccCccceecCcc
Q psy3954 94 FGEEFQFDIPRR---FRHLAVYAYDRDRTSKTDRVLGKVTIQRSDLHRISNKEHWFPLTP 150 (268)
Q Consensus 94 wne~f~f~v~~~---~~~l~~~v~d~d~~~~~d~~iG~~~i~l~~l~~~~~~~~w~~L~~ 150 (268)
|||+|.|.++.. ...|.|+|||++ .+++|++||++.++|.++..+...+.|++|++
T Consensus 84 wne~f~f~v~~~~l~~~~L~i~V~d~d-~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 142 (143)
T 3f04_A 84 FNEQFTFKVPYSELGGKTLVMAVYDFD-RFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQS 142 (143)
T ss_dssp EEEEEEECCCHHHHTTCEEEEEEEECC-SSSCCEEEEEEEEEGGGCCTTSCEEEEEECBC
T ss_pred CcCeEEEeecHhhcCCCEEEEEEEeCC-CCCCCceEEEEEEEHHHccCCCCcceEEECcC
Confidence 999999998754 589999999999 78899999999999999998888899999976
No 26
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.85 E-value=7.9e-21 Score=144.25 Aligned_cols=113 Identities=21% Similarity=0.284 Sum_probs=99.6
Q ss_pred ceEEEeeeeeeccCcccccccccccCCCeEEEEEEEcccCccc--cCCCCCC-ceE--------EEeeecccCCCCCCcc
Q psy3954 26 KLMVKHTAYKYYLQPRKRLTANQIIQDLGTLRIRIQYTADHIL--QPHYYED-LCT--------QILNSPSVNPVTSPFF 94 (268)
Q Consensus 26 ~l~~~~~~~~y~~~p~~~~~~~~~~~~~~~L~V~v~~~a~~L~--~~~~~~d-yv~--------~~~~T~~~~~t~nP~w 94 (268)
..|.++.++.|..+ .+.|.|+|+ +|++|+ +..+.+| ||+ ..+||+++++++||+|
T Consensus 11 ~~G~l~~~l~y~~~-------------~~~L~v~v~-~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~w 76 (141)
T 2d8k_A 11 NLGRIQFSVGYNFQ-------------ESTLTVKIM-KAQELPAKDFSGTSDPFVKIYLLPDKKHKLETKVKRKNLNPHW 76 (141)
T ss_dssp CCCEEEEEEEECSS-------------SCCEEEEEE-EEESCCCCSSSSCCCEEEEEEEESCCSSEEECCCCTTCSSCCC
T ss_pred eeeEEEEEEEEeCC-------------CCEEEEEEE-EeECCCCCCCCCCCCcEEEEEEECCCCccEeCceEcCCCCCcc
Confidence 46889999888876 789999999 999999 7788999 998 3679999999999999
Q ss_pred CcEEEEEe-cCC---CcEEEEEEEeCCCCCCCCceeEEEEEeccccccccCccceecCcccCC
Q psy3954 95 GEEFQFDI-PRR---FRHLAVYAYDRDRTSKTDRVLGKVTIQRSDLHRISNKEHWFPLTPVTQ 153 (268)
Q Consensus 95 ne~f~f~v-~~~---~~~l~~~v~d~d~~~~~d~~iG~~~i~l~~l~~~~~~~~w~~L~~~~~ 153 (268)
||+|.|.+ +.+ ...|.|+|||++ .+++|++||++.+++.++..+...+.|++|.+...
T Consensus 77 ne~f~f~~~~~~~~~~~~l~i~V~d~d-~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~~~ 138 (141)
T 2d8k_A 77 NETFLFEGFPYEKVVQRILYLQVLDYD-RFSRNDPIGEVSIPLNKVDLTQMQTFWKDLKPSGP 138 (141)
T ss_dssp CEEEEECSCCHHHHTTSEEEEEEEECC-SSSSCEEEEEEEEETTTSCTTSCEEEEECCEECCC
T ss_pred ccEEEECccCHHHcccCEEEEEEEECC-CCCCCcEEEEEEEEhhhhcCCCCccEEEECcCCCC
Confidence 99999985 322 588999999999 78899999999999999987777889999987653
No 27
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.85 E-value=6.5e-21 Score=144.86 Aligned_cols=108 Identities=28% Similarity=0.388 Sum_probs=92.8
Q ss_pred cccceEEEEEEEEc--CCeEEEEEceecCCC--CCCCCCCCEEEEEEEecCCcceeeeceeccCCCCCccceEEEEEccC
Q psy3954 155 SEVQGKIQIGVLST--PTSLMVNVNEASGLT--QVNGQCDPTAMVTVHYTHNKSDVQKSKVKKKSHSPVFNESFMFDRSL 230 (268)
Q Consensus 155 ~~~~G~i~v~l~~~--~~~L~v~v~~a~~L~--~~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~~ne~f~f~v~~ 230 (268)
....|+|++++.|. .+.|.|.|++|++|+ +..| +||||++++..++....+++|+++++++||+|||+|.|.++.
T Consensus 7 ~~~~G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~g-~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~ 85 (142)
T 2dmg_A 7 GSPLGQIQLTIRHSSQRNKLIVVVHACRNLIAFSEDG-SDPYVRMYLLPDKRRSGRRKTHVSKKTLNPVFDQSFDFSVSL 85 (142)
T ss_dssp SCSSCEEEEEEEEETTTTEEEEEEEEEECCCCSSTTC-CCEEEEEEEESCCCSSSCEECCCCCSCSSCEEEEEEEECCCH
T ss_pred CCCcceEEEEEEEeCCCCEEEEEEEEeECCCCCCCCC-CCeeEEEEEEcCCCCCCcccCCccCCCCCCCcCceEEEEecH
Confidence 34579999999998 899999999999997 5567 999999999854444568999999999999999999999876
Q ss_pred CCCc--eEEEEEEecCCC-C--CeeeEEEEEeCCccCC
Q psy3954 231 GDPI--ELVVSLHHDISG-L--NVFLGEVHIPLNNKET 263 (268)
Q Consensus 231 ~~~~--~l~i~V~d~~~~-~--~~~lG~~~l~l~~~~~ 263 (268)
.++. .|.|+|||++.. + +++||++.|+++++..
T Consensus 86 ~~l~~~~L~i~V~d~d~~~~~~~~~iG~~~i~l~~~~~ 123 (142)
T 2dmg_A 86 PEVQRRTLDVAVKNSGGFLSKDKGLLGKVLVALASEEL 123 (142)
T ss_dssp HHHHHCEEEEEEEECCCSSCCSCCCCEEEEEECCCSTT
T ss_pred HHhCcCEEEEEEEECCCccccCCcEEEEEEEecccccc
Confidence 5554 399999999987 3 4699999999999865
No 28
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.85 E-value=1.1e-20 Score=142.29 Aligned_cols=107 Identities=24% Similarity=0.354 Sum_probs=92.2
Q ss_pred ceEEEEEEEEcCCeEEEEEceecCCC-CCCCCCCCEEEEEEEecCCcceeeeceeccCCCCCccceEEEEE-ccCCCCc-
Q psy3954 158 QGKIQIGVLSTPTSLMVNVNEASGLT-QVNGQCDPTAMVTVHYTHNKSDVQKSKVKKKSHSPVFNESFMFD-RSLGDPI- 234 (268)
Q Consensus 158 ~G~i~v~l~~~~~~L~v~v~~a~~L~-~~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~~ne~f~f~-v~~~~~~- 234 (268)
.|.+.++..+..+.|.|.|++|++|+ +..|.+||||++++..++....+++|+++++++||+|||+|.|. ++..++.
T Consensus 8 ~~~~~~~~~~~~~~L~V~V~~a~~L~~~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~~v~~~~l~~ 87 (134)
T 2b3r_A 8 SGAVKLSVSYRNGTLFIMVMHIKDLVTEDGADPNPYVKTYLLPDTHKTSKRKTKISRKTRNPTFNEMLVYSGYSKETLRQ 87 (134)
T ss_dssp CCEEEEEEEEETTEEEEEEEEEECCCCTTSCCCCEEEEEEEESCSSSCCCEECCCCCSCSSCEEEEEEEEESCCHHHHTT
T ss_pred cEEEEEEEeecCCEEEEEEEEeeCCCCCCCCCCCeEEEEEEEcCCCCCceecCCcCcCCCCCCCccEEEECCcCHHHhCc
Confidence 46777777888999999999999998 55678999999999855445678999999999999999999999 7755433
Q ss_pred -eEEEEEEecCCC-CCeeeEEEEEeCCccCCC
Q psy3954 235 -ELVVSLHHDISG-LNVFLGEVHIPLNNKETS 264 (268)
Q Consensus 235 -~l~i~V~d~~~~-~~~~lG~~~l~l~~~~~~ 264 (268)
.|.|+|||++.. ++++||++.++++++..+
T Consensus 88 ~~L~~~V~d~d~~~~~~~lG~~~i~l~~l~~~ 119 (134)
T 2b3r_A 88 RELQLSVLSAESLRENFFLGGITLPLKDFNLS 119 (134)
T ss_dssp CEEEEEEEECCSSSCCEEEEEEEEEGGGSCTT
T ss_pred CEEEEEEEECCCCCCCcEEEEEEEEhhhccCC
Confidence 399999999988 899999999999999764
No 29
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.84 E-value=6e-21 Score=146.78 Aligned_cols=115 Identities=19% Similarity=0.271 Sum_probs=100.1
Q ss_pred ccccceEEEeeeeeeccCcccccccccccCCCeEEEEEEEcccCccc--cCCCCCC-ceE--------EEeeecccCCCC
Q psy3954 22 HATYKLMVKHTAYKYYLQPRKRLTANQIIQDLGTLRIRIQYTADHIL--QPHYYED-LCT--------QILNSPSVNPVT 90 (268)
Q Consensus 22 ~~~~~l~~~~~~~~y~~~p~~~~~~~~~~~~~~~L~V~v~~~a~~L~--~~~~~~d-yv~--------~~~~T~~~~~t~ 90 (268)
.....+|.++.++.|... .+.|.|+|+ +|++|+ +..+.+| ||+ ..+||+++++++
T Consensus 23 ~~~~~~G~l~~~l~y~~~-------------~~~L~V~v~-~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~ 88 (152)
T 1rsy_A 23 KEEEKLGKLQYSLDYDFQ-------------NNQLLVGII-QAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTL 88 (152)
T ss_dssp ---CCCCEEEEEEEEETT-------------TTEEEEEEE-EEESCCCCSTTSCCCEEEEEEEETTCCSCEECCCCTTCS
T ss_pred CCCCCceEEEEEEEEeCC-------------CCEEEEEEE-EeECCCCccCCCCcCeEEEEEEEcCCCceEeccccCCCC
Confidence 344567899999988876 789999999 999999 7788999 998 367999999999
Q ss_pred CCccCcEEEEEecCC---CcEEEEEEEeCCCCCCCCceeEEEEEeccccccccCccceecCccc
Q psy3954 91 SPFFGEEFQFDIPRR---FRHLAVYAYDRDRTSKTDRVLGKVTIQRSDLHRISNKEHWFPLTPV 151 (268)
Q Consensus 91 nP~wne~f~f~v~~~---~~~l~~~v~d~d~~~~~d~~iG~~~i~l~~l~~~~~~~~w~~L~~~ 151 (268)
||+|||+|.|.++.. ...|.|+|||++ .+++|++||++.+++.++..+...+.|++|.+.
T Consensus 89 nP~wne~f~f~v~~~~l~~~~L~i~V~d~d-~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 151 (152)
T 1rsy_A 89 NPVFNEQFTFKVPYSELGGKTLVMAVYDFD-RFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQSA 151 (152)
T ss_dssp SCEEEEEEEECCCHHHHTTCEEEEEEEECC-SSSCCEEEEEEEEEGGGCCCSSCEEEEEECBCC
T ss_pred CCcCcccEEEeecHHHcCCCEEEEEEEECC-CCCCCcEEEEEEEEchhccCCCCcceEEECCCC
Confidence 999999999998753 589999999999 788999999999999999877788999999764
No 30
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.84 E-value=5.5e-21 Score=144.22 Aligned_cols=106 Identities=23% Similarity=0.329 Sum_probs=91.5
Q ss_pred CeEEEEEEEcccCccc--cCCC-----------CCC-ceE------EEeeecccCCCCCCccCcEEEEEecCCCcEEEEE
Q psy3954 53 LGTLRIRIQYTADHIL--QPHY-----------YED-LCT------QILNSPSVNPVTSPFFGEEFQFDIPRRFRHLAVY 112 (268)
Q Consensus 53 ~~~L~V~v~~~a~~L~--~~~~-----------~~d-yv~------~~~~T~~~~~t~nP~wne~f~f~v~~~~~~l~~~ 112 (268)
.+.|.|+|+ +|++|+ +..+ .+| ||+ ...+|+++++|+||+|||+|.|.+... ..|.|+
T Consensus 5 ~g~L~v~v~-~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l~~~~~~~T~~~~~t~nP~WnE~f~f~v~~~-~~L~~~ 82 (136)
T 1gmi_A 5 NGLLKIKIC-EAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDDSRIGQTATKQKTNSPAWHDEFVTDVCNG-RKIELA 82 (136)
T ss_dssp EEEEEEEEE-EEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEEE-CEEEEE
T ss_pred ceEEEEEEE-eCcCCCCcccccccccccccCCcCcCcEEEEEECCeEeeeeeEECCCcCCccCCEEEEEecCC-CEEEEE
Confidence 579999999 999998 4333 389 999 447999999999999999999998776 899999
Q ss_pred EEeCCCCCCCCceeEEEEEecccccccc--CccceecCcccCCCcccceEEEEEEEEc
Q psy3954 113 AYDRDRTSKTDRVLGKVTIQRSDLHRIS--NKEHWFPLTPVTQDSEVQGKIQIGVLST 168 (268)
Q Consensus 113 v~d~d~~~~~d~~iG~~~i~l~~l~~~~--~~~~w~~L~~~~~~~~~~G~i~v~l~~~ 168 (268)
|||+| .+++|++||++.+++.++.... ..+.|++|.+ .|+|++++.|.
T Consensus 83 V~d~d-~~~~dd~iG~~~i~l~~l~~~~~~~~~~w~~L~~-------~G~i~l~l~~~ 132 (136)
T 1gmi_A 83 VFHDA-PIGYDDFVANCTIQFEELLQNGSRHFEDWIDLEP-------EGKVYVIIDLS 132 (136)
T ss_dssp EEECC-SSSSCEEEEEEEEEHHHHTSTTCSEEEEEEECBS-------SCEEEEEEEEE
T ss_pred EEeCC-CCCCCCEEEEEEEEHHHhcccCCCCccEEEEcCC-------CeEEEEEEEEE
Confidence 99999 7889999999999999988543 3478998865 69999999875
No 31
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.84 E-value=3.2e-21 Score=147.63 Aligned_cols=114 Identities=15% Similarity=0.237 Sum_probs=99.1
Q ss_pred ceEEEeeeeeeccCcccccccccccCCCeEEEEEEEcccCccc--c-CCCCCC-ceE----------EEeeecccCCCCC
Q psy3954 26 KLMVKHTAYKYYLQPRKRLTANQIIQDLGTLRIRIQYTADHIL--Q-PHYYED-LCT----------QILNSPSVNPVTS 91 (268)
Q Consensus 26 ~l~~~~~~~~y~~~p~~~~~~~~~~~~~~~L~V~v~~~a~~L~--~-~~~~~d-yv~----------~~~~T~~~~~t~n 91 (268)
..|.+..++.|... .+.|.|+|+ +|++|+ + ..+.+| ||+ .+++|+++++|+|
T Consensus 8 ~~G~l~~sl~y~~~-------------~~~L~V~v~-~a~~L~~~d~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~n 73 (148)
T 3fdw_A 8 VTGRIAFSLKYEQQ-------------TQSLVVHVK-ECHQLAYADEAKKRSNPYVKTYLLPDKSRQGKRKTSIKRDTVN 73 (148)
T ss_dssp CCCEEEEEEEEETT-------------TTEEEEEEE-EEESCCCSBTTTTBCCEEEEEEEETCCSGGGEEECCCCSSCSS
T ss_pred cceEEEEEEEEeCC-------------CCEEEEEEE-EecCCCCcccCCCCCCeEEEEEEEcCCcccCccccccCCCCCC
Confidence 34788888888876 789999999 999999 5 578899 998 2789999999999
Q ss_pred CccCcEEEEEecCC---CcEEEEEEEeCCCCCCCCceeEEEEEeccccccccCccceecCcccCCC
Q psy3954 92 PFFGEEFQFDIPRR---FRHLAVYAYDRDRTSKTDRVLGKVTIQRSDLHRISNKEHWFPLTPVTQD 154 (268)
Q Consensus 92 P~wne~f~f~v~~~---~~~l~~~v~d~d~~~~~d~~iG~~~i~l~~l~~~~~~~~w~~L~~~~~~ 154 (268)
|+|||+|.|.++.. ...|.|+|||+| .+++|++||++.++|.++..+...+.|++|.+....
T Consensus 74 P~wne~f~f~v~~~~~~~~~L~~~V~d~d-~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~~~~ 138 (148)
T 3fdw_A 74 PLYDETLRYEIPESLLAQRTLQFSVWHHG-RFGRNTFLGEAEIQMDSWKLDKKLDHCLPLHGKISA 138 (148)
T ss_dssp CEEEEEEEEECCSTTGGGCEEEEEEEEEC-GGGCEEEEEEEEEEHHHHHHHCCSEEEEECBCC---
T ss_pred CcEeeEEEEEeChhHhCceEEEEEEEECC-CCcCCcEEEEEEEEcccccccCCccceEECcCcccc
Confidence 99999999998875 457999999999 788999999999999999877788899999887644
No 32
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.84 E-value=7.3e-21 Score=146.47 Aligned_cols=109 Identities=23% Similarity=0.362 Sum_probs=92.9
Q ss_pred cccceEEEEEEEEc--CCeEEEEEceecCCCCC-CCCCCCEEEEEEEecCCcceeeeceeccCCCCCccceEEEEEccCC
Q psy3954 155 SEVQGKIQIGVLST--PTSLMVNVNEASGLTQV-NGQCDPTAMVTVHYTHNKSDVQKSKVKKKSHSPVFNESFMFDRSLG 231 (268)
Q Consensus 155 ~~~~G~i~v~l~~~--~~~L~v~v~~a~~L~~~-~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~~ne~f~f~v~~~ 231 (268)
....|++.+++.|. .+.|.|.|++|++|+.. .|.+||||++.+..+.....+++|+++++++||+|||+|.|.++..
T Consensus 10 ~~~~G~~~lsL~y~~~~~~L~V~v~~a~~L~~~d~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~ 89 (153)
T 3fbk_A 10 HKVQGAGQLRLSIDAQDRVLLLHIIEGKGLISKQPGTCDPYVKISLIPEDSRLRHQKTQTVPDCRDPAFHEHFFFPVQEE 89 (153)
T ss_dssp ---CCCCEEEEEEEESSSEEEEEEEEEESCCCCSSSCCCEEEEEEEESCSCCTTCEECCCCTTCSSCEEEEEEEEECCGG
T ss_pred cCCCCEEEEEEEEECCCCEEEEEEEEeeCCCCCCCCCCCEEEEEEEEcCCCCccEEeccccCCCCCCccccEEEEecccH
Confidence 44578999999988 99999999999999732 5789999999998554456789999999999999999999998766
Q ss_pred CCce-EEEEEEecCCC-C-CeeeEEEEEeCCccCC
Q psy3954 232 DPIE-LVVSLHHDISG-L-NVFLGEVHIPLNNKET 263 (268)
Q Consensus 232 ~~~~-l~i~V~d~~~~-~-~~~lG~~~l~l~~~~~ 263 (268)
++.. |.|+|||++.. + +++||++.++++++..
T Consensus 90 ~~~~~L~i~V~d~d~~~~~d~~lG~~~i~l~~l~~ 124 (153)
T 3fbk_A 90 DDQKRLLVTVWNRASQSRQSGLIGCMSFGVKSLLT 124 (153)
T ss_dssp GTTSEEEEEEEECCSSGGGCEEEEEEEEEHHHHTC
T ss_pred HhCCEEEEEEEeCCCCCCCCcEEEEEEEEHHHhcC
Confidence 6644 99999999987 5 9999999999998864
No 33
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.84 E-value=2.5e-20 Score=141.49 Aligned_cols=108 Identities=29% Similarity=0.379 Sum_probs=91.9
Q ss_pred cccceEEEEEEEEc--CCeEEEEEceecCCC--CCCCCCCCEEEEEEEecCCcceeeeceeccCCCCCccceEEEEEc-c
Q psy3954 155 SEVQGKIQIGVLST--PTSLMVNVNEASGLT--QVNGQCDPTAMVTVHYTHNKSDVQKSKVKKKSHSPVFNESFMFDR-S 229 (268)
Q Consensus 155 ~~~~G~i~v~l~~~--~~~L~v~v~~a~~L~--~~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~~ne~f~f~v-~ 229 (268)
.+..|+|.+++.|. .+.|.|+|++|++|+ +..|.+||||++++..+ ...+++|+++++++||+|||+|.|.+ +
T Consensus 9 ~~~~G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~--~~~~~kT~v~~~t~nP~wne~f~f~~~~ 86 (141)
T 2d8k_A 9 RENLGRIQFSVGYNFQESTLTVKIMKAQELPAKDFSGTSDPFVKIYLLPD--KKHKLETKVKRKNLNPHWNETFLFEGFP 86 (141)
T ss_dssp CCCCCEEEEEEEECSSSCCEEEEEEEEESCCCCSSSSCCCEEEEEEEESC--CSSEEECCCCTTCSSCCCCEEEEECSCC
T ss_pred CceeeEEEEEEEEeCCCCEEEEEEEEeECCCCCCCCCCCCcEEEEEEECC--CCccEeCceEcCCCCCccccEEEECccC
Confidence 44589999999996 899999999999997 55778999999999732 23578999999999999999999985 3
Q ss_pred CCCC--ceEEEEEEecCCC-CCeeeEEEEEeCCccCCC
Q psy3954 230 LGDP--IELVVSLHHDISG-LNVFLGEVHIPLNNKETS 264 (268)
Q Consensus 230 ~~~~--~~l~i~V~d~~~~-~~~~lG~~~l~l~~~~~~ 264 (268)
..++ ..|.|+|||++.+ ++++||++.+++.++..+
T Consensus 87 ~~~~~~~~l~i~V~d~d~~~~~~~iG~~~i~l~~l~~~ 124 (141)
T 2d8k_A 87 YEKVVQRILYLQVLDYDRFSRNDPIGEVSIPLNKVDLT 124 (141)
T ss_dssp HHHHTTSEEEEEEEECCSSSSCEEEEEEEEETTTSCTT
T ss_pred HHHcccCEEEEEEEECCCCCCCcEEEEEEEEhhhhcCC
Confidence 2222 3399999999998 899999999999999764
No 34
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.84 E-value=9.8e-21 Score=145.57 Aligned_cols=107 Identities=27% Similarity=0.387 Sum_probs=92.8
Q ss_pred ccceEEEEEEEEc--CCeEEEEEceecCCC--CCCCCCCCEEEEEEEecCCcceeeeceeccCCCCCccceEEEEEccCC
Q psy3954 156 EVQGKIQIGVLST--PTSLMVNVNEASGLT--QVNGQCDPTAMVTVHYTHNKSDVQKSKVKKKSHSPVFNESFMFDRSLG 231 (268)
Q Consensus 156 ~~~G~i~v~l~~~--~~~L~v~v~~a~~L~--~~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~~ne~f~f~v~~~ 231 (268)
...|+|.+++.|. .+.|.|+|++|++|+ +..|.+||||++++..+ ...+++|+++++++||+|||+|.|.+...
T Consensus 26 ~~~G~l~~~l~y~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~--~~~~~kT~v~~~t~nP~wne~f~f~v~~~ 103 (152)
T 1rsy_A 26 EKLGKLQYSLDYDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPD--KKKKFETKVHRKTLNPVFNEQFTFKVPYS 103 (152)
T ss_dssp CCCCEEEEEEEEETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETT--CCSCEECCCCTTCSSCEEEEEEEECCCHH
T ss_pred CCceEEEEEEEEeCCCCEEEEEEEEeECCCCccCCCCcCeEEEEEEEcC--CCceEeccccCCCCCCcCcccEEEeecHH
Confidence 4579999999995 899999999999997 55678999999999732 23578999999999999999999988765
Q ss_pred CC--ceEEEEEEecCCC-CCeeeEEEEEeCCccCCC
Q psy3954 232 DP--IELVVSLHHDISG-LNVFLGEVHIPLNNKETS 264 (268)
Q Consensus 232 ~~--~~l~i~V~d~~~~-~~~~lG~~~l~l~~~~~~ 264 (268)
++ ..|.|+|||++.+ ++++||++.|++.++..+
T Consensus 104 ~l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~ 139 (152)
T 1rsy_A 104 ELGGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFG 139 (152)
T ss_dssp HHTTCEEEEEEEECCSSSCCEEEEEEEEEGGGCCCS
T ss_pred HcCCCEEEEEEEECCCCCCCcEEEEEEEEchhccCC
Confidence 44 3399999999998 899999999999999664
No 35
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.83 E-value=2.2e-21 Score=147.46 Aligned_cols=108 Identities=25% Similarity=0.346 Sum_probs=91.8
Q ss_pred ccceEEEEEEEEcCCeEEEEEceecCCC--CCCCCCCCEEEEEEEecCCc---------ceeeeceeccCCCCCccceEE
Q psy3954 156 EVQGKIQIGVLSTPTSLMVNVNEASGLT--QVNGQCDPTAMVTVHYTHNK---------SDVQKSKVKKKSHSPVFNESF 224 (268)
Q Consensus 156 ~~~G~i~v~l~~~~~~L~v~v~~a~~L~--~~~g~~dpyv~v~l~~~~~~---------~~~~kT~v~~~t~nP~~ne~f 224 (268)
...|+|.+++.|..+.|.|.|++|++|+ +..|.+||||++++...... ..+++|+++++++||+|||.|
T Consensus 4 ~~~G~i~~~l~y~~~~L~V~v~~a~~L~~~d~~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wne~f 83 (142)
T 1rh8_A 4 PITGEIQLQINYDLGNLIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWNQTV 83 (142)
T ss_dssp CCCCEEEEEEEEETTEEEEEEEEEESCCCCSSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHHSCEEEEEE
T ss_pred CcceEEEEEEEEcCCEEEEEEEEecCCCCCCCCCCCCceEEEEEecCCCcccccccccccceeeccccCCCCCCCCCCEE
Confidence 3589999999999999999999999997 55788999999999743221 246899999999999999999
Q ss_pred EEE-ccCCCCc--eEEEEEEecCCC-CCeeeEEEEEeCCccCC
Q psy3954 225 MFD-RSLGDPI--ELVVSLHHDISG-LNVFLGEVHIPLNNKET 263 (268)
Q Consensus 225 ~f~-v~~~~~~--~l~i~V~d~~~~-~~~~lG~~~l~l~~~~~ 263 (268)
.|. ++.+++. .|.|+|||++.. ++++||++.|+++++..
T Consensus 84 ~f~~v~~~~l~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~ 126 (142)
T 1rh8_A 84 IYKSISMEQLMKKTLEVTVWDYDRFSSNDFLGEVLIDLSSTSH 126 (142)
T ss_dssp EECSCCHHHHTTCEEEEEEEEECSSSCEEEEEEEEEETTSCGG
T ss_pred EECCcCHHHccCCEEEEEEEECCCCCCCceEEEEEEecccccc
Confidence 997 6544332 399999999998 89999999999998864
No 36
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.83 E-value=1.9e-20 Score=142.50 Aligned_cols=107 Identities=26% Similarity=0.378 Sum_probs=93.4
Q ss_pred ccceEEEEEEEEc--CCeEEEEEceecCCC--CCCCCCCCEEEEEEEecCCcceeeeceeccCCCCCccceEEEEEccCC
Q psy3954 156 EVQGKIQIGVLST--PTSLMVNVNEASGLT--QVNGQCDPTAMVTVHYTHNKSDVQKSKVKKKSHSPVFNESFMFDRSLG 231 (268)
Q Consensus 156 ~~~G~i~v~l~~~--~~~L~v~v~~a~~L~--~~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~~ne~f~f~v~~~ 231 (268)
+..|+|.+++.|. .+.|.|+|++|++|+ +..+.+||||++++..++ ..+++|++++++.||+|||+|.|.+...
T Consensus 18 ~~~G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~l~~~~--~~~~kT~v~~~t~nP~wne~f~f~v~~~ 95 (143)
T 3f04_A 18 EKLGKLQYSLDYDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDK--KKKFETKVHRKTLNPVFNEQFTFKVPYS 95 (143)
T ss_dssp CCCCEEEEEEEEETTTTEEEEEEEEEECCCCBGGGBCCCEEEEEEEESCC--SCCEECCCCCSCSSCEEEEEEEECCCHH
T ss_pred cCeEEEEEEEEEeCCCCEEEEEEEEecCCCCCCCCCCcCcEEEEEEECCC--CccEECccCcCCCCCcCcCeEEEeecHh
Confidence 3479999999996 899999999999997 457789999999997332 3578999999999999999999998765
Q ss_pred CC--ceEEEEEEecCCC-CCeeeEEEEEeCCccCCC
Q psy3954 232 DP--IELVVSLHHDISG-LNVFLGEVHIPLNNKETS 264 (268)
Q Consensus 232 ~~--~~l~i~V~d~~~~-~~~~lG~~~l~l~~~~~~ 264 (268)
++ ..|.|+|||++.. ++++||++.++|.++..+
T Consensus 96 ~l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~ 131 (143)
T 3f04_A 96 ELGGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFG 131 (143)
T ss_dssp HHTTCEEEEEEEECCSSSCCEEEEEEEEEGGGCCTT
T ss_pred hcCCCEEEEEEEeCCCCCCCceEEEEEEEHHHccCC
Confidence 54 3499999999998 899999999999999765
No 37
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.83 E-value=5.9e-21 Score=144.80 Aligned_cols=108 Identities=19% Similarity=0.281 Sum_probs=92.5
Q ss_pred ccceEEEEEEEEc--CCeEEEEEceecCCC--CCCCCCCCEEEEEEEecCCcceeeeceeccCCCCCccceEEEEE-ccC
Q psy3954 156 EVQGKIQIGVLST--PTSLMVNVNEASGLT--QVNGQCDPTAMVTVHYTHNKSDVQKSKVKKKSHSPVFNESFMFD-RSL 230 (268)
Q Consensus 156 ~~~G~i~v~l~~~--~~~L~v~v~~a~~L~--~~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~~ne~f~f~-v~~ 230 (268)
...|+|.+++.|. .+.|.|.|++|++|+ +..|.+||||++++..++....+++|+++++++||+|||+|.|. +..
T Consensus 5 ~~~G~i~~~l~y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~ 84 (141)
T 1v27_A 5 SSGGQLSIKLWFDKVGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHR 84 (141)
T ss_dssp CCCCEEEEEEEEETTTTEEEEEEEEEESCCCCSSSCCCCEEEECCCSSCCSSSSCCBCCCCSSCSSCCCCCCCEECSCCT
T ss_pred CcccEEEEEEEEeCCCCEEEEEEEEccCCCCcCCCCCCCCEEEEEEecCCCCCcceeCccccCCCCCccccEEEEccCCH
Confidence 3479999999998 889999999999997 55678999999999754434678999999999999999999998 444
Q ss_pred CCCc--eEEEEEEecCCC-C--CeeeEEEEEeCCccCC
Q psy3954 231 GDPI--ELVVSLHHDISG-L--NVFLGEVHIPLNNKET 263 (268)
Q Consensus 231 ~~~~--~l~i~V~d~~~~-~--~~~lG~~~l~l~~~~~ 263 (268)
.++. .|.|+|||++.. + +++||++.|++.++..
T Consensus 85 ~~~~~~~l~i~V~d~d~~~~~~~~~lG~~~i~l~~l~~ 122 (141)
T 1v27_A 85 REFRERMLEITLWDQARVREEESEFLGEILIELETALL 122 (141)
T ss_dssp TGGGTCEEEEEEEEBCSSSSCCBCCCEEEEEEGGGCCC
T ss_pred HHhcCCEEEEEEEECCCCcCCCCceEEEEEEEccccCC
Confidence 4443 399999999988 5 8999999999998754
No 38
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.83 E-value=2.9e-20 Score=139.52 Aligned_cols=112 Identities=12% Similarity=0.261 Sum_probs=94.2
Q ss_pred CeEEEEEEEcccCccc--cCCCCCC-ceE-------EEeeecccCCCCCCccCcEEEEEecCCCcEEEEEEEeCCCCCCC
Q psy3954 53 LGTLRIRIQYTADHIL--QPHYYED-LCT-------QILNSPSVNPVTSPFFGEEFQFDIPRRFRHLAVYAYDRDRTSKT 122 (268)
Q Consensus 53 ~~~L~V~v~~~a~~L~--~~~~~~d-yv~-------~~~~T~~~~~t~nP~wne~f~f~v~~~~~~l~~~v~d~d~~~~~ 122 (268)
...|.|+|+ +|++|+ +..|.+| ||+ +.++|+++++|+||+|||+|.|.+... ..|.|+|||++ ..++
T Consensus 4 ~~~L~V~v~-~a~~L~~~d~~g~sDpyv~v~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~-~~l~~~v~d~d-~~~~ 80 (132)
T 3pyc_A 4 FIKIRLTVL-CAKNLAKKDFFRLPDPFAKIVVDGSGQCHSTDTVKNTLDPKWNQHYDLYVGKT-DSITISVWNHK-KIHK 80 (132)
T ss_dssp EEEEEEEEE-EEESCCCCSTTCCCCEEEEEEETTTCCEEECCCCSSCSSCEEEEEEEEEEETT-CCEEEEEEEGG-GTTS
T ss_pred eEEEEEEEE-EeECCCCCCCCCCcCeEEEEEECCCCceEECCccCCCCCCCccCEEEEEeCCC-CEEEEEEEECC-CCCC
Confidence 468999999 999998 7788999 998 578999999999999999999998776 45999999999 6765
Q ss_pred ---CceeEEEEEeccccc-cccCccceecCcccC--CCcccceEEEEEEEE
Q psy3954 123 ---DRVLGKVTIQRSDLH-RISNKEHWFPLTPVT--QDSEVQGKIQIGVLS 167 (268)
Q Consensus 123 ---d~~iG~~~i~l~~l~-~~~~~~~w~~L~~~~--~~~~~~G~i~v~l~~ 167 (268)
|++||++.++++++. .......|++|.... ......|+|.+++.+
T Consensus 81 ~~~d~~lG~~~i~l~~l~~~~~~~~~~~~L~~~~~~~~~~~~G~i~v~l~~ 131 (132)
T 3pyc_A 81 KQGAGFLGCVRLLSNAISRLKDTGYQRLDLCKLNPSDTDAVRGQIVVSLQT 131 (132)
T ss_dssp STTTTEEEEEEECHHHHHHHTTSCCEEEECBCSSTTCCCCCCSEEEEEEEE
T ss_pred CCCCCceEEEEEeHHHhhcccccCcEEEeeeecCCCCCCceeEEEEEEEEc
Confidence 899999999999884 344456889987653 234568999999875
No 39
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.83 E-value=1.6e-20 Score=141.39 Aligned_cols=98 Identities=17% Similarity=0.302 Sum_probs=87.3
Q ss_pred CeEEEEEEEcccCccc-cCCCCCC-ceE----------EEeeecccCCCCCCccCcEEEEE-ecCC---CcEEEEEEEeC
Q psy3954 53 LGTLRIRIQYTADHIL-QPHYYED-LCT----------QILNSPSVNPVTSPFFGEEFQFD-IPRR---FRHLAVYAYDR 116 (268)
Q Consensus 53 ~~~L~V~v~~~a~~L~-~~~~~~d-yv~----------~~~~T~~~~~t~nP~wne~f~f~-v~~~---~~~l~~~v~d~ 116 (268)
.+.|.|+|+ +|++|+ +.++.+| ||+ .++||+++++|+||+|||+|.|. ++.. ...|.|+|||+
T Consensus 19 ~~~L~V~V~-~a~~L~~~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~~v~~~~l~~~~L~~~V~d~ 97 (134)
T 2b3r_A 19 NGTLFIMVM-HIKDLVTEDGADPNPYVKTYLLPDTHKTSKRKTKISRKTRNPTFNEMLVYSGYSKETLRQRELQLSVLSA 97 (134)
T ss_dssp TTEEEEEEE-EEECCCCTTSCCCCEEEEEEEESCSSSCCCEECCCCCSCSSCEEEEEEEEESCCHHHHTTCEEEEEEEEC
T ss_pred CCEEEEEEE-EeeCCCCCCCCCCCeEEEEEEEcCCCCCceecCCcCcCCCCCCCccEEEECCcCHHHhCcCEEEEEEEEC
Confidence 579999999 999999 7788999 998 36799999999999999999999 7753 57999999999
Q ss_pred CCCCCCCceeEEEEEeccccccccCccceecCcccC
Q psy3954 117 DRTSKTDRVLGKVTIQRSDLHRISNKEHWFPLTPVT 152 (268)
Q Consensus 117 d~~~~~d~~iG~~~i~l~~l~~~~~~~~w~~L~~~~ 152 (268)
| .+++|++||++.++|+++..+...+.|++|.+..
T Consensus 98 d-~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~~~ 132 (134)
T 2b3r_A 98 E-SLRENFFLGGITLPLKDFNLSKETVKWYQLTAAT 132 (134)
T ss_dssp C-SSSCCEEEEEEEEEGGGSCTTSCEEEEEECBC--
T ss_pred C-CCCCCcEEEEEEEEhhhccCCCCcceeEECCCcc
Confidence 9 7889999999999999998877889999997653
No 40
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.83 E-value=2.3e-20 Score=146.27 Aligned_cols=113 Identities=15% Similarity=0.194 Sum_probs=98.3
Q ss_pred ccceEEEeeeeeeccCcccccccccccCCCeEEEEEEEcccCccc--cC-CCCCC-ceE----------EEeeecccCCC
Q psy3954 24 TYKLMVKHTAYKYYLQPRKRLTANQIIQDLGTLRIRIQYTADHIL--QP-HYYED-LCT----------QILNSPSVNPV 89 (268)
Q Consensus 24 ~~~l~~~~~~~~y~~~p~~~~~~~~~~~~~~~L~V~v~~~a~~L~--~~-~~~~d-yv~----------~~~~T~~~~~t 89 (268)
.-.+|.++.++.| . .+.|.|+|+ +|++|+ +. .+.+| ||+ ..+||+++++|
T Consensus 15 ~~~~G~l~~~l~y--~-------------~~~L~V~v~-~a~~L~~~d~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t 78 (171)
T 2q3x_A 15 TPAMGDIQIGMED--K-------------KGQLEVEVI-RARSLTQKPGSKSTPAPYVKVYLLENGACIAKKKTRIARKT 78 (171)
T ss_dssp --CCCEEEEEEEE--E-------------TTEEEEEEE-EEESCCCCC---CCCEEEEEEEEEETTEEEEEEECCCCCSC
T ss_pred CCCccEEEEEEEE--C-------------CCEEEEEEE-EeeCCCCCCcCCCCCCceEEEEEECCCccccceeCccCCCC
Confidence 3456889988888 2 579999999 999999 53 68999 998 28899999999
Q ss_pred CCCccCcEEEEEecCCCcEEEEEEE-eCCCCCCCCceeEEEEEeccccccccCccceecCcccCC
Q psy3954 90 TSPFFGEEFQFDIPRRFRHLAVYAY-DRDRTSKTDRVLGKVTIQRSDLHRISNKEHWFPLTPVTQ 153 (268)
Q Consensus 90 ~nP~wne~f~f~v~~~~~~l~~~v~-d~d~~~~~d~~iG~~~i~l~~l~~~~~~~~w~~L~~~~~ 153 (268)
+||+|||+|.|.+......|.|+|| |+| .+++|++||++.++|+++..+...+.|++|.+...
T Consensus 79 ~nP~wne~f~f~v~~~~~~L~~~V~~d~d-~~~~d~~iG~~~i~l~~l~~~~~~~~W~~L~~~~~ 142 (171)
T 2q3x_A 79 LDPLYQQSLVFDESPQGKVLQVIVWGDYG-RMDHKCFMGVAQILLEELDLSSMVIGWYKLFPPSS 142 (171)
T ss_dssp SSCEEEEEEECSSCCTTEEEEEEEEEECS-TTCSSEEEEEEEECGGGSCTTSCEEEEEECBCGGG
T ss_pred CCCCCCcEEEEEecCCCCEEEEEEEEcCC-CCCCCCEEEEEEEEHHHcccCCCcceeEECCCccc
Confidence 9999999999999877899999999 999 78899999999999999987778899999987654
No 41
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.83 E-value=4.1e-20 Score=137.49 Aligned_cols=106 Identities=17% Similarity=0.186 Sum_probs=90.9
Q ss_pred CeEEEEEEEcccCcccc-----CCCCCC-ceE--------EEeeecccCCCCCCccCcEEEEEecCC-CcEEEEEEEeCC
Q psy3954 53 LGTLRIRIQYTADHILQ-----PHYYED-LCT--------QILNSPSVNPVTSPFFGEEFQFDIPRR-FRHLAVYAYDRD 117 (268)
Q Consensus 53 ~~~L~V~v~~~a~~L~~-----~~~~~d-yv~--------~~~~T~~~~~t~nP~wne~f~f~v~~~-~~~l~~~v~d~d 117 (268)
.+.|.|+|+ +|++|+. ..|.+| ||+ ..+||+++++++||+|||+|.|.+... ...|.|+|||++
T Consensus 2 ~~~L~v~v~-~a~~L~~~~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~l~i~V~d~d 80 (126)
T 1rlw_A 2 SHKFTVVVL-RATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDAN 80 (126)
T ss_dssp CEEEEEEEE-EEESCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCEEEEEEEECC
T ss_pred CcEEEEEEE-eeeCCCCCCccccCCCCCCEEEEEEccCCCceEEccccCCCCCCcccceEEEEecCCCCCEEEEEEEECC
Confidence 578999999 9999993 358899 999 577999999999999999999998544 789999999999
Q ss_pred CCCCCCceeEEEEEeccccccccCccceecCcccCCCcccceEEEEEEE
Q psy3954 118 RTSKTDRVLGKVTIQRSDLHRISNKEHWFPLTPVTQDSEVQGKIQIGVL 166 (268)
Q Consensus 118 ~~~~~d~~iG~~~i~l~~l~~~~~~~~w~~L~~~~~~~~~~G~i~v~l~ 166 (268)
..+ |++||++.++|+++..+...+.|++|.+. ..|.|++++.
T Consensus 81 -~~~-~~~iG~~~i~l~~l~~~~~~~~~~~L~~~-----~~g~i~~~le 122 (126)
T 1rlw_A 81 -YVM-DETLGTATFTVSSMKVGEKKEVPFIFNQV-----TEMVLEMSLE 122 (126)
T ss_dssp -SSC-CEEEEEEEEEGGGSCTTCEEEEEEEETTT-----EEEEEEEEEE
T ss_pred -CCC-CceeEEEEEEHHHccCCCcEEEEEEcCCC-----ceEEEEEEEE
Confidence 664 88999999999999877778899999762 2577777664
No 42
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.83 E-value=6.3e-20 Score=143.81 Aligned_cols=107 Identities=24% Similarity=0.278 Sum_probs=91.5
Q ss_pred ccceEEEEEEEEcCCeEEEEEceecCCC--CC-CCCCCCEEEEEEEecCCcceeeeceeccCCCCCccceEEEEEccCCC
Q psy3954 156 EVQGKIQIGVLSTPTSLMVNVNEASGLT--QV-NGQCDPTAMVTVHYTHNKSDVQKSKVKKKSHSPVFNESFMFDRSLGD 232 (268)
Q Consensus 156 ~~~G~i~v~l~~~~~~L~v~v~~a~~L~--~~-~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~~ne~f~f~v~~~~ 232 (268)
...|+|.+++.|..+.|.|.|++|++|+ +. .|.+||||++++..++....+++|+++++++||+|||+|.|.+...
T Consensus 16 ~~~G~l~~~l~y~~~~L~V~v~~a~~L~~~d~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~- 94 (171)
T 2q3x_A 16 PAMGDIQIGMEDKKGQLEVEVIRARSLTQKPGSKSTPAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFDESPQ- 94 (171)
T ss_dssp -CCCEEEEEEEEETTEEEEEEEEEESCCCCC---CCCEEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEECSSCCT-
T ss_pred CCccEEEEEEEECCCEEEEEEEEeeCCCCCCcCCCCCCceEEEEEECCCccccceeCccCCCCCCCCCCcEEEEEecCC-
Confidence 3479999999999999999999999997 32 5789999999998544444688999999999999999999998543
Q ss_pred CceEEEEEE-ecCCC-CCeeeEEEEEeCCccCC
Q psy3954 233 PIELVVSLH-HDISG-LNVFLGEVHIPLNNKET 263 (268)
Q Consensus 233 ~~~l~i~V~-d~~~~-~~~~lG~~~l~l~~~~~ 263 (268)
...|.|+|| |++.+ ++++||++.++|+++..
T Consensus 95 ~~~L~~~V~~d~d~~~~d~~iG~~~i~l~~l~~ 127 (171)
T 2q3x_A 95 GKVLQVIVWGDYGRMDHKCFMGVAQILLEELDL 127 (171)
T ss_dssp TEEEEEEEEEECSTTCSSEEEEEEEECGGGSCT
T ss_pred CCEEEEEEEEcCCCCCCCCEEEEEEEEHHHccc
Confidence 233999999 99988 89999999999999865
No 43
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.83 E-value=2.6e-20 Score=139.08 Aligned_cols=109 Identities=16% Similarity=0.219 Sum_probs=90.5
Q ss_pred cceEEEeeeeeeccCcccccccccccCCCeEEEEEEEcccCccc--cCCCCCC-ceE----------EEeeecccCCCCC
Q psy3954 25 YKLMVKHTAYKYYLQPRKRLTANQIIQDLGTLRIRIQYTADHIL--QPHYYED-LCT----------QILNSPSVNPVTS 91 (268)
Q Consensus 25 ~~l~~~~~~~~y~~~p~~~~~~~~~~~~~~~L~V~v~~~a~~L~--~~~~~~d-yv~----------~~~~T~~~~~t~n 91 (268)
+..|.+..++.|... .+.|.|+|+ +|++|+ +..+.+| ||+ ..+||+++++|+|
T Consensus 2 ~~~G~l~~~l~y~~~-------------~~~L~v~v~-~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~n 67 (129)
T 2bwq_A 2 FLSGQLSIKLWFDKV-------------GHQLIVTIL-GAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLE 67 (129)
T ss_dssp CCCCEEEEEEEEETT-------------TTEEEEEEE-EEESCCCCTTSCCBCEEEEEEEESSCSGGGEEECCCCSSBSS
T ss_pred ceeEEEEEEEEEccC-------------CCEEEEEEE-EeeCCCCCCCCCCCCCEEEEEEecCCCCCcceecccccCCCC
Confidence 346888888888876 789999999 999999 7788899 998 4689999999999
Q ss_pred CccCcEEEEEe-cCC---CcEEEEEEEeCCCCCCC--CceeEEEEEeccccccccCccceecCc
Q psy3954 92 PFFGEEFQFDI-PRR---FRHLAVYAYDRDRTSKT--DRVLGKVTIQRSDLHRISNKEHWFPLT 149 (268)
Q Consensus 92 P~wne~f~f~v-~~~---~~~l~~~v~d~d~~~~~--d~~iG~~~i~l~~l~~~~~~~~w~~L~ 149 (268)
|+|||+|.|.+ +.. ...|.|+|||++ ..++ |++||++.+++.++.... .+.|++|+
T Consensus 68 P~wne~f~f~~~~~~~~~~~~l~~~V~d~d-~~~~~~~~~lG~~~i~l~~l~~~~-~~~W~~Lq 129 (129)
T 2bwq_A 68 PKWNQTFIYSPVHRREFRERMLEITLWDQA-RVREEESEFLGEILIELETALLDD-EPHWYKLQ 129 (129)
T ss_dssp CEEEEEEEECSCCGGGGGGCEEEEEEEEC--------CEEEEEEEEEGGGCCCSS-CEEEEECC
T ss_pred CccccEEEEccCCHHHhcCCeEEEEEEECC-cCcCcCCceeEEEEEEccccCCCc-CCccEECc
Confidence 99999999994 332 579999999999 7776 999999999999987543 78999884
No 44
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.83 E-value=4.2e-20 Score=144.89 Aligned_cols=116 Identities=15% Similarity=0.166 Sum_probs=96.8
Q ss_pred cCCCeEEEEEEEcccCccc--cCCCCCC-ceE-----EEeeecccCCCCCCccCcEEEEEecCCCcEEEEEEEeCCCCCC
Q psy3954 50 IQDLGTLRIRIQYTADHIL--QPHYYED-LCT-----QILNSPSVNPVTSPFFGEEFQFDIPRRFRHLAVYAYDRDRTSK 121 (268)
Q Consensus 50 ~~~~~~L~V~v~~~a~~L~--~~~~~~d-yv~-----~~~~T~~~~~t~nP~wne~f~f~v~~~~~~l~~~v~d~d~~~~ 121 (268)
....+.|.|+|+ +|++|+ +..+.+| ||+ +.+||+++++|+||+|||+|.|.+.. ...|.|+|||+| .++
T Consensus 32 ~~~~~~L~V~V~-~A~~L~~~~~~~~sDPYv~v~~~~~~~kT~v~~~tlnP~Wne~f~f~v~~-~~~L~~~V~D~d-~~~ 108 (173)
T 2nq3_A 32 LTMKSQLQITVI-SAKLKENKKNWFGPSPYVEVTVDGQSKKTEKCNNTNSPKWKQPLTVIVTP-VSKLHFRVWSHQ-TLK 108 (173)
T ss_dssp CSCCEEEEEEEE-EEEECCCC--CCCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEECT-TCEEEEEEEECC-SSS
T ss_pred cCCceEEEEEEE-EeECCCCcccCCCCCeEEEEEECCEEeEccccCCCCCCeECCEEEEEeCC-CCEEEEEEEECC-CCC
Confidence 456789999999 999998 3334589 999 78999999999999999999999865 689999999999 788
Q ss_pred CCceeEEEEEecccccccc-----CccceecCcccCCCcccceEEEEEEEEc
Q psy3954 122 TDRVLGKVTIQRSDLHRIS-----NKEHWFPLTPVTQDSEVQGKIQIGVLST 168 (268)
Q Consensus 122 ~d~~iG~~~i~l~~l~~~~-----~~~~w~~L~~~~~~~~~~G~i~v~l~~~ 168 (268)
+|++||++.+++.++.... ....|++|..........|+|.+++.+.
T Consensus 109 ~dd~lG~~~i~l~~l~~~~~~~~~~~~~~~~L~~~~~~~~~~G~L~v~l~~l 160 (173)
T 2nq3_A 109 SDVLLGTAALDIYETLKSNNMKLEEVVVTLQLGGDKEPTETIGDLSICLDGL 160 (173)
T ss_dssp CCEEEEEEEEEHHHHHHHTTTEESSEEEEEEEEESSCTTSEEEEEEEEEESE
T ss_pred CCceEEEEEEEHHHhcccCCCCcceeEEEEECccCCCCCcccEEEEEEEeee
Confidence 9999999999999886432 1256999987644455689999998764
No 45
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.83 E-value=3.6e-20 Score=140.47 Aligned_cols=112 Identities=15% Similarity=0.214 Sum_probs=97.0
Q ss_pred ceEEEeeeeeeccCcccccccccccCCCeEEEEEEEcccCccc--cCCCCCC-ceE----------EEeeecccCCCCCC
Q psy3954 26 KLMVKHTAYKYYLQPRKRLTANQIIQDLGTLRIRIQYTADHIL--QPHYYED-LCT----------QILNSPSVNPVTSP 92 (268)
Q Consensus 26 ~l~~~~~~~~y~~~p~~~~~~~~~~~~~~~L~V~v~~~a~~L~--~~~~~~d-yv~----------~~~~T~~~~~t~nP 92 (268)
..|.+..++.|... .+.|.|+|+ +|++|+ +..+.+| ||+ ..+||+++++|+||
T Consensus 6 ~~G~i~~~l~y~~~-------------~~~L~v~v~-~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP 71 (141)
T 1v27_A 6 SGGQLSIKLWFDKV-------------GHQLIVTIL-GAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEP 71 (141)
T ss_dssp CCCEEEEEEEEETT-------------TTEEEEEEE-EEESCCCCSSSCCCCEEEECCCSSCCSSSSCCBCCCCSSCSSC
T ss_pred cccEEEEEEEEeCC-------------CCEEEEEEE-EccCCCCcCCCCCCCCEEEEEEecCCCCCcceeCccccCCCCC
Confidence 46888888888876 689999999 999999 7788899 998 47899999999999
Q ss_pred ccCcEEEEE-ecCC---CcEEEEEEEeCCCCCCC--CceeEEEEEeccccccccCccceecCcccCC
Q psy3954 93 FFGEEFQFD-IPRR---FRHLAVYAYDRDRTSKT--DRVLGKVTIQRSDLHRISNKEHWFPLTPVTQ 153 (268)
Q Consensus 93 ~wne~f~f~-v~~~---~~~l~~~v~d~d~~~~~--d~~iG~~~i~l~~l~~~~~~~~w~~L~~~~~ 153 (268)
+|||+|.|. ++.. ...|.|+|||++ ..++ |++||++.+++.++... ..+.|++|.+...
T Consensus 72 ~wne~f~f~~~~~~~~~~~~l~i~V~d~d-~~~~~~~~~lG~~~i~l~~l~~~-~~~~W~~L~~~~~ 136 (141)
T 1v27_A 72 KWNQTFIYSPVHRREFRERMLEITLWDQA-RVREEESEFLGEILIELETALLD-DEPHWYKLQTHDS 136 (141)
T ss_dssp CCCCCCEECSCCTTGGGTCEEEEEEEEBC-SSSSCCBCCCEEEEEEGGGCCCS-SEEEEEECBCCSS
T ss_pred ccccEEEEccCCHHHhcCCEEEEEEEECC-CCcCCCCceEEEEEEEccccCCC-CCCceEECccccc
Confidence 999999999 4433 589999999999 7776 89999999999998754 3789999987653
No 46
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.82 E-value=2.1e-20 Score=142.83 Aligned_cols=116 Identities=22% Similarity=0.340 Sum_probs=100.1
Q ss_pred cccceEEEeeeeeeccCcccccccccccCCCeEEEEEEEcccCcccc---CC------CCCC-ceE--------EEeeec
Q psy3954 23 ATYKLMVKHTAYKYYLQPRKRLTANQIIQDLGTLRIRIQYTADHILQ---PH------YYED-LCT--------QILNSP 84 (268)
Q Consensus 23 ~~~~l~~~~~~~~y~~~p~~~~~~~~~~~~~~~L~V~v~~~a~~L~~---~~------~~~d-yv~--------~~~~T~ 84 (268)
....+|.++.++.|... .+.|.|+|+ +|++|+. .+ +.+| ||+ ..+||+
T Consensus 8 ~~~~~G~l~~~l~y~~~-------------~~~L~V~v~-~a~~L~~~~d~~g~~~~~~~~dpyv~v~l~~~~~~~~kT~ 73 (147)
T 2enp_A 8 SKYQLGMLHFSTQYDLL-------------HNHLTVRVI-EARDLPPPISHDGSRQDMAHSNPYVKICLLPDQKNSKQTG 73 (147)
T ss_dssp SCCCCCEEEEEEEEETT-------------TTEEEEEEE-EEECCCCSCSSCCSSCTTCCCCCEEEEEEETCCSSCEECC
T ss_pred CCCcceEEEEEEEEcCC-------------CCEEEEEEE-EEeCCCCccccccccccCCCCCcEEEEEEEeCCCcceEee
Confidence 34578899999999876 789999999 9999982 23 4789 998 367999
Q ss_pred ccCCCCCCccCcEEEEEecCC---CcEEEEEEEeCCCCCCCCceeEEEEEeccccccccCccceecCcccCC
Q psy3954 85 SVNPVTSPFFGEEFQFDIPRR---FRHLAVYAYDRDRTSKTDRVLGKVTIQRSDLHRISNKEHWFPLTPVTQ 153 (268)
Q Consensus 85 ~~~~t~nP~wne~f~f~v~~~---~~~l~~~v~d~d~~~~~d~~iG~~~i~l~~l~~~~~~~~w~~L~~~~~ 153 (268)
++++++||+|||+|.|.++.. ...|.|+|||++ .+++|++||++.++|.++........|+.|.+..+
T Consensus 74 v~~~t~nP~wne~f~f~v~~~~l~~~~L~~~V~d~d-~~~~~~~iG~~~i~l~~l~~~~~~~~w~~L~~~~~ 144 (147)
T 2enp_A 74 VKRKTQKPVFEERYTFEIPFLEAQRRTLLLTVVDFD-KFSRHCVIGKVSVPLCEVDLVKGGHWWKALIPSGP 144 (147)
T ss_dssp CCCSCSSCCCCBCCEECCCHHHHHHSEEEEEEECCS-TTCCSCCCEEEEEETTTSCTTTCCCEEECCBCCCC
T ss_pred cccCCCCCeEeeeEEEEeChHHhccCEEEEEEEECC-CCcCCcEEEEEEEechhcCCCCCccEEEEeecCCC
Confidence 999999999999999998764 468999999999 78899999999999999987777789999987653
No 47
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.82 E-value=3.9e-20 Score=140.50 Aligned_cols=113 Identities=16% Similarity=0.201 Sum_probs=96.5
Q ss_pred cceEEEeeeeeeccCcccccccccccCCCeEEEEEEEcccCccc--cCCCCCC-ceE----------EEeeecccCCCCC
Q psy3954 25 YKLMVKHTAYKYYLQPRKRLTANQIIQDLGTLRIRIQYTADHIL--QPHYYED-LCT----------QILNSPSVNPVTS 91 (268)
Q Consensus 25 ~~l~~~~~~~~y~~~p~~~~~~~~~~~~~~~L~V~v~~~a~~L~--~~~~~~d-yv~----------~~~~T~~~~~t~n 91 (268)
...|.++.++.|... .+.|.|+|+ +|++|+ +..+ +| ||+ .++||+++++|+|
T Consensus 8 ~~~G~l~~~l~y~~~-------------~~~L~v~v~-~a~~L~~~d~~g-~dpyv~v~l~~~~~~~~~~kT~v~~~t~n 72 (142)
T 2dmg_A 8 SPLGQIQLTIRHSSQ-------------RNKLIVVVH-ACRNLIAFSEDG-SDPYVRMYLLPDKRRSGRRKTHVSKKTLN 72 (142)
T ss_dssp CSSCEEEEEEEEETT-------------TTEEEEEEE-EEECCCCSSTTC-CCEEEEEEEESCCCSSSCEECCCCCSCSS
T ss_pred CCcceEEEEEEEeCC-------------CCEEEEEEE-EeECCCCCCCCC-CCeeEEEEEEcCCCCCCcccCCccCCCCC
Confidence 346888888888765 689999999 999999 6677 99 998 3569999999999
Q ss_pred CccCcEEEEEecCC---CcEEEEEEEeCCCCCC--CCceeEEEEEeccccccccCccceecCcccCC
Q psy3954 92 PFFGEEFQFDIPRR---FRHLAVYAYDRDRTSK--TDRVLGKVTIQRSDLHRISNKEHWFPLTPVTQ 153 (268)
Q Consensus 92 P~wne~f~f~v~~~---~~~l~~~v~d~d~~~~--~d~~iG~~~i~l~~l~~~~~~~~w~~L~~~~~ 153 (268)
|+|||+|.|.++.. ...|.|+|||++ .++ .|++||++.+++.++......+.|++|.+...
T Consensus 73 P~wne~f~f~v~~~~l~~~~L~i~V~d~d-~~~~~~~~~iG~~~i~l~~~~~~~~~~~W~~L~~~~~ 138 (142)
T 2dmg_A 73 PVFDQSFDFSVSLPEVQRRTLDVAVKNSG-GFLSKDKGLLGKVLVALASEELAKGWTQWYDLTEDSG 138 (142)
T ss_dssp CEEEEEEEECCCHHHHHHCEEEEEEEECC-CSSCCSCCCCEEEEEECCCSTTTTCBCCBCCCBCSCS
T ss_pred CCcCceEEEEecHHHhCcCEEEEEEEECC-CccccCCcEEEEEEEecccccccccccceeeccCCCC
Confidence 99999999998764 469999999999 664 35799999999999987778889999987653
No 48
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.82 E-value=1e-19 Score=137.51 Aligned_cols=112 Identities=18% Similarity=0.194 Sum_probs=96.2
Q ss_pred ceEEEeeeeeeccCcccccccccccCCCeEEEEEEEcccCccc--cCC-CCCC-ceE--------EEeeecccCCCCCCc
Q psy3954 26 KLMVKHTAYKYYLQPRKRLTANQIIQDLGTLRIRIQYTADHIL--QPH-YYED-LCT--------QILNSPSVNPVTSPF 93 (268)
Q Consensus 26 ~l~~~~~~~~y~~~p~~~~~~~~~~~~~~~L~V~v~~~a~~L~--~~~-~~~d-yv~--------~~~~T~~~~~t~nP~ 93 (268)
..|.+..++.|... .+.|.|+|+ +|++|+ +.. +.+| ||+ ..+||+++++++||+
T Consensus 7 ~~G~l~~~l~y~~~-------------~~~L~v~v~-~a~~L~~~d~~~~~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~ 72 (138)
T 1ugk_A 7 GLGTLFFSLEYNFE-------------RKAFVVNIK-EARGLPAMDEQSMTSDPYIKMTILPEKKHKVKTRVLRKTLDPA 72 (138)
T ss_dssp CCCEEEEEEEEEGG-------------GTEEEEEEE-EEESCCCCBTTTTBCEEEEEEEEETTTCSEEECCCCSSCSSCE
T ss_pred ccEEEEEEEEEECC-------------CCEEEEEEE-EeeCCCCCCCCCCCCCCEEEEEEecCCCceEecCcCcCCCCCc
Confidence 46888888888866 789999999 999999 653 8899 999 478999999999999
Q ss_pred cCcEEEEE-ecCC---CcEEEEEEEeCCCCCCCCceeEEEEEeccccccccCc-cceecCcccC
Q psy3954 94 FGEEFQFD-IPRR---FRHLAVYAYDRDRTSKTDRVLGKVTIQRSDLHRISNK-EHWFPLTPVT 152 (268)
Q Consensus 94 wne~f~f~-v~~~---~~~l~~~v~d~d~~~~~d~~iG~~~i~l~~l~~~~~~-~~w~~L~~~~ 152 (268)
|||+|.|. ++.+ ...|.|+|||+| .+++|++||++.++|.++....+. ..|++|.+..
T Consensus 73 wne~f~f~~v~~~~~~~~~l~i~V~d~d-~~~~~~~lG~~~i~l~~l~~~~~~~~~~~~l~~~~ 135 (138)
T 1ugk_A 73 FDETFTFYGIPYTQIQELALHFTILSFD-RFSRDDIIGEVLIPLSGIELSEGKMLMNREIISGP 135 (138)
T ss_dssp EEEEEEEECCCSTTGGGCEEEEEEEEEC-SSCCCCCCEEEEEECTTCCCTTCCEEEEEECBSSS
T ss_pred EeeEEEEcCcCHHHhccCEEEEEEEECC-CCCCCcEEEEEEEehhHccCCCCcchhhhhhhcCC
Confidence 99999996 7654 468999999999 788999999999999999865544 5679997754
No 49
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.82 E-value=3.5e-20 Score=142.61 Aligned_cols=116 Identities=16% Similarity=0.198 Sum_probs=96.5
Q ss_pred ccccceEEEeeeeeeccCcccccccccccCCCeEEEEEEEcccCccc--cCCCCCC-ceE----------EEeeecccCC
Q psy3954 22 HATYKLMVKHTAYKYYLQPRKRLTANQIIQDLGTLRIRIQYTADHIL--QPHYYED-LCT----------QILNSPSVNP 88 (268)
Q Consensus 22 ~~~~~l~~~~~~~~y~~~p~~~~~~~~~~~~~~~L~V~v~~~a~~L~--~~~~~~d-yv~----------~~~~T~~~~~ 88 (268)
++...-|.+..++.|... .+.|.|+|+ +|++|+ + .+.+| ||+ .+++|+++++
T Consensus 8 ~~~~~~G~~~lsL~y~~~-------------~~~L~V~v~-~a~~L~~~d-~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~ 72 (153)
T 3fbk_A 8 HSHKVQGAGQLRLSIDAQ-------------DRVLLLHII-EGKGLISKQ-PGTCDPYVKISLIPEDSRLRHQKTQTVPD 72 (153)
T ss_dssp -----CCCCEEEEEEEES-------------SSEEEEEEE-EEESCCCCS-SSCCCEEEEEEEESCSCCTTCEECCCCTT
T ss_pred CccCCCCEEEEEEEEECC-------------CCEEEEEEE-EeeCCCCCC-CCCCCEEEEEEEEcCCCCccEEeccccCC
Confidence 445566788888889887 899999999 999999 5 68899 998 3589999999
Q ss_pred CCCCccCcEEEEEecCC--CcEEEEEEEeCCCCCCC-CceeEEEEEecccccc-ccCccceecCcccCC
Q psy3954 89 VTSPFFGEEFQFDIPRR--FRHLAVYAYDRDRTSKT-DRVLGKVTIQRSDLHR-ISNKEHWFPLTPVTQ 153 (268)
Q Consensus 89 t~nP~wne~f~f~v~~~--~~~l~~~v~d~d~~~~~-d~~iG~~~i~l~~l~~-~~~~~~w~~L~~~~~ 153 (268)
|+||+|||+|.|.++.. ...|.|+|||.+ .+++ |++||++.+++.++.. ......|++|.+...
T Consensus 73 t~nP~wne~f~f~v~~~~~~~~L~i~V~d~d-~~~~~d~~lG~~~i~l~~l~~~~~~~~~W~~L~~~~~ 140 (153)
T 3fbk_A 73 CRDPAFHEHFFFPVQEEDDQKRLLVTVWNRA-SQSRQSGLIGCMSFGVKSLLTPDKEISGWYYLLGEHL 140 (153)
T ss_dssp CSSCEEEEEEEEECCGGGTTSEEEEEEEECC-SSGGGCEEEEEEEEEHHHHTC--CCEEEEEECBCTTG
T ss_pred CCCCccccEEEEecccHHhCCEEEEEEEeCC-CCCCCCcEEEEEEEEHHHhcCCCCccccEEECCChhh
Confidence 99999999999998543 567999999999 6776 9999999999999984 677889999987653
No 50
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.81 E-value=5.6e-20 Score=139.66 Aligned_cols=113 Identities=17% Similarity=0.220 Sum_probs=97.8
Q ss_pred ccceEEEeeeeeeccCcccccccccccCCCeEEEEEEEcccCccc--cCCCCCC-ceE----------EEeeecccCCCC
Q psy3954 24 TYKLMVKHTAYKYYLQPRKRLTANQIIQDLGTLRIRIQYTADHIL--QPHYYED-LCT----------QILNSPSVNPVT 90 (268)
Q Consensus 24 ~~~l~~~~~~~~y~~~p~~~~~~~~~~~~~~~L~V~v~~~a~~L~--~~~~~~d-yv~----------~~~~T~~~~~t~ 90 (268)
.-.+|.+..++.|... .+.|.|+|+ +|++|+ +..+.+| ||+ ..+||+++++++
T Consensus 12 ~~~~G~l~~~l~y~~~-------------~~~L~V~v~-~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~ 77 (142)
T 2chd_A 12 ATTLGALEFSLLYDQD-------------NSNLQCTII-RAKGLKPMDSNGLADPYVKLHLLPGASKSNKLRTKTLRNTR 77 (142)
T ss_dssp --CCCEEEEEEEEEGG-------------GTEEEEEEE-EEESCCCCCTTSCCCEEEEEEEESCCSGGGEEECCCCCSCS
T ss_pred CCccceEEEEEEEeCC-------------CCEEEEEEE-EecCCCCCCCCCCCCCEEEEEEEcCCCCcceeeCCcCCCCC
Confidence 3457889999888865 689999999 999999 7788999 998 367999999999
Q ss_pred CCccCcEEEEE-ecCC---CcEEEEEEEeCCCCCCCCceeEEEEEeccccccccCccceecCccc
Q psy3954 91 SPFFGEEFQFD-IPRR---FRHLAVYAYDRDRTSKTDRVLGKVTIQRSDLHRISNKEHWFPLTPV 151 (268)
Q Consensus 91 nP~wne~f~f~-v~~~---~~~l~~~v~d~d~~~~~d~~iG~~~i~l~~l~~~~~~~~w~~L~~~ 151 (268)
||+|||+|.|. ++.. ...|.|+|||++ .+++|++||++.+++.++..+.....|++|+++
T Consensus 78 nP~wne~f~f~~~~~~~~~~~~l~i~V~d~d-~~~~d~~iG~~~i~l~~l~~~~~~~~~~~L~~p 141 (142)
T 2chd_A 78 NPVWNETLQYHGITEEDMQRKTLRISVCDED-KFGHNEFIGETRFSLKKLKANQRKNFNICLERV 141 (142)
T ss_dssp SCEEEEEEEEESCCHHHHHHCEEEEEEEEEC-TTSCEEEEEEEEEEGGGCCTTCCEEEEEECBCC
T ss_pred CCcCcCEEEEcccCHHHccCCEEEEEEEECC-CCCCCcEEEEEEEEHHHcCCCCccEEEEecccC
Confidence 99999999999 6554 378999999999 788899999999999999887778888888653
No 51
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.81 E-value=1.8e-19 Score=136.08 Aligned_cols=105 Identities=18% Similarity=0.279 Sum_probs=90.2
Q ss_pred EEEeeeeeeccCcccccccccccCCCeEEEEEEEcccCccc--cCCCCCC-ceE----------EEeeecccCCCCCCcc
Q psy3954 28 MVKHTAYKYYLQPRKRLTANQIIQDLGTLRIRIQYTADHIL--QPHYYED-LCT----------QILNSPSVNPVTSPFF 94 (268)
Q Consensus 28 ~~~~~~~~y~~~p~~~~~~~~~~~~~~~L~V~v~~~a~~L~--~~~~~~d-yv~----------~~~~T~~~~~t~nP~w 94 (268)
|.+..++.|... .+.|.|+|+ +|++|+ +..+.+| ||+ .+++|+++++++||+|
T Consensus 3 G~l~~sl~y~~~-------------~~~L~v~v~-~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~w 68 (138)
T 3n5a_A 3 GELLLSLCYNPS-------------ANSIIVNII-KARNLKAMDIGGTSDPYVKVWLMYKDKRVEKKKTVTKKRNLNPIF 68 (138)
T ss_dssp CEEEEEEEEETT-------------TTEEEEEEE-EEESCCCCBTTTBCCEEEEEEEEETTEEEEEEECCCCSSCSSCEE
T ss_pred cEEEEEEEEcCC-------------CCeEEEEEE-EeeCCCCcCCCCCcCeEEEEEEEeCCCccceEeCccccCCCCCcC
Confidence 677888888766 789999999 999999 7788999 998 3789999999999999
Q ss_pred CcEEEEEecCC---CcEEEEEEEeCCCCCCCCceeEEEEEeccccccccCccceecCc
Q psy3954 95 GEEFQFDIPRR---FRHLAVYAYDRDRTSKTDRVLGKVTIQRSDLHRISNKEHWFPLT 149 (268)
Q Consensus 95 ne~f~f~v~~~---~~~l~~~v~d~d~~~~~d~~iG~~~i~l~~l~~~~~~~~w~~L~ 149 (268)
||+|.|.++.. ...|.|+|||.+ .+++|++||++.+++.++. .+.+.|++|.
T Consensus 69 ne~f~f~v~~~~l~~~~l~~~V~d~~-~~~~~~~lG~~~i~l~~~~--~~~~~W~~l~ 123 (138)
T 3n5a_A 69 NESFAFDIPTEKLRETTIIITVMDKD-KLSRNDVIGKIYLSWKSGP--GEVKHWKDMI 123 (138)
T ss_dssp EEEEEEECCGGGGGGEEEEEEEEECC-SSSCCEEEEEEEESSSSCH--HHHHHHHHHH
T ss_pred cceEEEECChhhcCceEEEEEEEECC-CCCCCcEEEEEEEccccCC--hHHHHHHHHH
Confidence 99999998776 368999999999 7889999999999998753 3455666664
No 52
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.81 E-value=7.2e-20 Score=138.11 Aligned_cols=109 Identities=17% Similarity=0.334 Sum_probs=94.8
Q ss_pred ceEEEeeeeeeccCcccccccccccCCCeEEEEEEEcccCccc--cCCCCCC-ceE----------EEeeecccCCCCCC
Q psy3954 26 KLMVKHTAYKYYLQPRKRLTANQIIQDLGTLRIRIQYTADHIL--QPHYYED-LCT----------QILNSPSVNPVTSP 92 (268)
Q Consensus 26 ~l~~~~~~~~y~~~p~~~~~~~~~~~~~~~L~V~v~~~a~~L~--~~~~~~d-yv~----------~~~~T~~~~~t~nP 92 (268)
..|.+..++.| . .+.|.|+|+ +|++|+ +..+.+| ||+ ..++|+++++++||
T Consensus 3 ~~G~l~~~l~~--~-------------~~~L~v~v~-~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP 66 (137)
T 3rdl_A 3 KRGRIYLKAEV--T-------------DEKLHVTVR-DAKNLIPMDPNGLSDPYVKLKLIPDPKNESKQKTKTIRSTLNP 66 (137)
T ss_dssp CCCEEEEEEEE--E-------------TTEEEEEEE-EEESCCCCSTTSCCCEEEEEEEECCTTCCCCEECCCCCSCSSC
T ss_pred cceEEEEEEEE--c-------------CCEEEEEEE-EeeCCCCCCCCCCCCeeEEEEEEcCCCCCeeecCceEcCCCCC
Confidence 46788888777 2 589999999 999999 7788999 998 46899999999999
Q ss_pred ccCcEEEEEecCC--CcEEEEEEEeCCCCCCCCceeEEEEEeccccccccCccceecCcccC
Q psy3954 93 FFGEEFQFDIPRR--FRHLAVYAYDRDRTSKTDRVLGKVTIQRSDLHRISNKEHWFPLTPVT 152 (268)
Q Consensus 93 ~wne~f~f~v~~~--~~~l~~~v~d~d~~~~~d~~iG~~~i~l~~l~~~~~~~~w~~L~~~~ 152 (268)
.|||+|.|.+... ...|.|+|||++ ..++|++||++.++++++.... .+.|++|.+..
T Consensus 67 ~wne~f~f~~~~~~~~~~l~i~v~d~d-~~~~~~~iG~~~i~l~~l~~~~-~~~W~~L~~~~ 126 (137)
T 3rdl_A 67 QWNESFTFKLKPSDKDRRLSVEIWDWD-RTTRNDFMGSLSFGVSELMKMP-ASGWYKLLNQE 126 (137)
T ss_dssp EEEEEEEEECCGGGGGCEEEEEEEECC-SSSCCEEEEEEEEEHHHHHHSC-EEEEEECBCHH
T ss_pred CcccEEEEEcCchhcCCEEEEEEEECC-CCCCCceEEEEEEeHHHhccCc-cCceEECcCcc
Confidence 9999999998764 468999999999 7889999999999999997544 88999997654
No 53
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.81 E-value=3.2e-19 Score=138.11 Aligned_cols=114 Identities=18% Similarity=0.254 Sum_probs=97.2
Q ss_pred ccceEEEeeeeeeccCcccccccccccCCCeEEEEEEEcccCccc--cCCCCCC-ceE----------EEeeecccCCCC
Q psy3954 24 TYKLMVKHTAYKYYLQPRKRLTANQIIQDLGTLRIRIQYTADHIL--QPHYYED-LCT----------QILNSPSVNPVT 90 (268)
Q Consensus 24 ~~~l~~~~~~~~y~~~p~~~~~~~~~~~~~~~L~V~v~~~a~~L~--~~~~~~d-yv~----------~~~~T~~~~~t~ 90 (268)
....|.++.+++|... .+.|.|+|+ +|++|+ +..+.+| ||+ ..+||+++++++
T Consensus 8 ~~~~G~l~~~l~y~~~-------------~~~L~V~v~-~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~ 73 (159)
T 1tjx_A 8 LEKLGDICFSLRYVPT-------------AGKLTVVIL-EAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTL 73 (159)
T ss_dssp GGCCCEEEEEEEEETT-------------TTEEEEEEE-EEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCS
T ss_pred cCcCCeEEEEEEEcCC-------------CCEEEEEEE-EeeCCCCccCCCCCCeEEEEEEEeCCceeceeeCceecCCC
Confidence 3467899999988876 789999999 999999 7788999 998 367999999999
Q ss_pred CCccCcEEEEEecCC---CcEEEEEEEeCCCCCCCCceeEEEEEeccccc------------cccCccceecCcccC
Q psy3954 91 SPFFGEEFQFDIPRR---FRHLAVYAYDRDRTSKTDRVLGKVTIQRSDLH------------RISNKEHWFPLTPVT 152 (268)
Q Consensus 91 nP~wne~f~f~v~~~---~~~l~~~v~d~d~~~~~d~~iG~~~i~l~~l~------------~~~~~~~w~~L~~~~ 152 (268)
||+|||+|.|.++.. ...|.|+|||+| .+++|++||++.+++..+. .......|++|.+..
T Consensus 74 nP~wne~f~f~v~~~~l~~~~l~i~V~d~d-~~~~~~~iG~~~i~l~~~~~~~~~w~~l~~~~~~~~~~W~~L~~~~ 149 (159)
T 1tjx_A 74 NPYYNESFSFEVPFEQIQKVQVVVTVLDYD-KIGKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQVEE 149 (159)
T ss_dssp SCEEEEEEEEECCGGGGGGCEEEEEEEECC-SSSCCEEEEEEEEETTCCHHHHHHHHHHHHSTTCCEEEEEECBCHH
T ss_pred CCcccceEEEEcCHHHhCCcEEEEEEEECC-CCCCCceEEEEEECCCCCCcHHHHHHHHHHCCCCeeeeEEECcCcc
Confidence 999999999998765 468999999999 7889999999999998541 234567899887654
No 54
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.80 E-value=4.5e-20 Score=140.18 Aligned_cols=110 Identities=24% Similarity=0.365 Sum_probs=95.7
Q ss_pred ceEEEeeeeeeccCcccccccccccCCCeEEEEEEEcccCccc--cCCCCCC-ceE-----E--------------Eeee
Q psy3954 26 KLMVKHTAYKYYLQPRKRLTANQIIQDLGTLRIRIQYTADHIL--QPHYYED-LCT-----Q--------------ILNS 83 (268)
Q Consensus 26 ~l~~~~~~~~y~~~p~~~~~~~~~~~~~~~L~V~v~~~a~~L~--~~~~~~d-yv~-----~--------------~~~T 83 (268)
..|.++.++.|. .+.|.|+|+ +|++|+ +..|.+| ||+ . .+||
T Consensus 5 ~~G~i~~~l~y~---------------~~~L~V~v~-~a~~L~~~d~~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT 68 (142)
T 1rh8_A 5 ITGEIQLQINYD---------------LGNLIIHIL-QARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRT 68 (142)
T ss_dssp CCCEEEEEEEEE---------------TTEEEEEEE-EEESCCCCSSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTT
T ss_pred cceEEEEEEEEc---------------CCEEEEEEE-EecCCCCCCCCCCCCceEEEEEecCCCcccccccccccceeec
Confidence 467888888776 368999999 999999 7788999 999 1 3789
Q ss_pred cccCCCCCCccCcEEEEE-ecCC---CcEEEEEEEeCCCCCCCCceeEEEEEeccccccccCccceecCcccC
Q psy3954 84 PSVNPVTSPFFGEEFQFD-IPRR---FRHLAVYAYDRDRTSKTDRVLGKVTIQRSDLHRISNKEHWFPLTPVT 152 (268)
Q Consensus 84 ~~~~~t~nP~wne~f~f~-v~~~---~~~l~~~v~d~d~~~~~d~~iG~~~i~l~~l~~~~~~~~w~~L~~~~ 152 (268)
+++++|+||+|||+|.|. ++.+ ...|.|+|||+| .+++|++||++.+++.++........|++|.+..
T Consensus 69 ~v~~~t~nP~wne~f~f~~v~~~~l~~~~l~i~V~d~d-~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~~~ 140 (142)
T 1rh8_A 69 KYVQKSLNPEWNQTVIYKSISMEQLMKKTLEVTVWDYD-RFSSNDFLGEVLIDLSSTSHLDNTPRWYPLKEQT 140 (142)
T ss_dssp TTTHHHHSCEEEEEEEECSCCHHHHTTCEEEEEEEEEC-SSSCEEEEEEEEEETTSCGGGTTCCEEEECBCCC
T ss_pred cccCCCCCCCCCCEEEECCcCHHHccCCEEEEEEEECC-CCCCCceEEEEEEeccccccCCCCCeEEECCccC
Confidence 999999999999999997 6542 679999999999 7889999999999999998777788999998754
No 55
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.80 E-value=2.7e-19 Score=137.02 Aligned_cols=109 Identities=17% Similarity=0.313 Sum_probs=93.7
Q ss_pred ceEEEeeeeeeccCcccccccccccCCCeEEEEEEEcccCccc--cCCCCCC-ceE----------EEeeecccCCCCCC
Q psy3954 26 KLMVKHTAYKYYLQPRKRLTANQIIQDLGTLRIRIQYTADHIL--QPHYYED-LCT----------QILNSPSVNPVTSP 92 (268)
Q Consensus 26 ~l~~~~~~~~y~~~p~~~~~~~~~~~~~~~L~V~v~~~a~~L~--~~~~~~d-yv~----------~~~~T~~~~~t~nP 92 (268)
..|.++.++.|. .+.|.|+|+ +|++|+ +..+.+| ||+ ..+||+++++++||
T Consensus 18 ~~G~l~~~l~~~---------------~~~L~v~v~-~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP 81 (149)
T 1a25_A 18 RRGRIYIQAHID---------------REVLIVVVR-DAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNP 81 (149)
T ss_dssp TTCEEEEEEEES---------------SSEEEEEEE-EEESCCCCSTTSCCCEEEEEEEESCTTCSSCEECCCCSSCSSC
T ss_pred cceEEEEEEEec---------------CCEEEEEEE-EeeCCCCCCCCCCcCeEEEEEEECCCCCcceEecceeCCCCCC
Confidence 457777777662 368999999 999999 7788899 998 36799999999999
Q ss_pred ccCcEEEEEecCC--CcEEEEEEEeCCCCCCCCceeEEEEEeccccccccCccceecCcccC
Q psy3954 93 FFGEEFQFDIPRR--FRHLAVYAYDRDRTSKTDRVLGKVTIQRSDLHRISNKEHWFPLTPVT 152 (268)
Q Consensus 93 ~wne~f~f~v~~~--~~~l~~~v~d~d~~~~~d~~iG~~~i~l~~l~~~~~~~~w~~L~~~~ 152 (268)
+|||+|.|.+... ...|.|+|||++ .+++|++||++.+++.++... ..+.|++|.+..
T Consensus 82 ~wne~f~f~v~~~~~~~~L~i~V~d~d-~~~~~~~iG~~~i~l~~l~~~-~~~~W~~L~~~~ 141 (149)
T 1a25_A 82 EWNETFRFQLKESDKDRRLSVEIWDWD-LTSRNDFMGSLSFGISELQKA-GVDGWFKLLSQE 141 (149)
T ss_dssp EEEEEEEEECCSGGGGCEEEEEEEECC-SSSCCEEEEEEEEEHHHHTTC-CEEEEEECBCHH
T ss_pred cCCcEEEEEeccccCCCEEEEEEEECC-CCCCCCEEEEEEEEHHHhCcC-ccCCeEEccCCC
Confidence 9999999998765 568999999999 788899999999999998754 578999997653
No 56
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.79 E-value=2.8e-19 Score=137.50 Aligned_cols=110 Identities=17% Similarity=0.223 Sum_probs=89.9
Q ss_pred ccceEEEeeeeeeccCcccccccccccCCCeEEEEEEEcccCccc--cCCCCCC-ceE----------EEeeecccCCCC
Q psy3954 24 TYKLMVKHTAYKYYLQPRKRLTANQIIQDLGTLRIRIQYTADHIL--QPHYYED-LCT----------QILNSPSVNPVT 90 (268)
Q Consensus 24 ~~~l~~~~~~~~y~~~p~~~~~~~~~~~~~~~L~V~v~~~a~~L~--~~~~~~d-yv~----------~~~~T~~~~~t~ 90 (268)
....|.+..++.|... .+.|.|+|+ +|++|+ +..+.+| ||+ .++||+++++|+
T Consensus 13 ~~~~G~l~~~l~y~~~-------------~~~L~v~v~-~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~ 78 (153)
T 1w15_A 13 PSGRGELLVSLCYQST-------------TNTLTVVVL-KARHLPKSDVSGLSDPYVKVNLYHAKKRISKKKTHVKKCTP 78 (153)
T ss_dssp ---CCEEEEEEEEETT-------------TTEEEEEEE-EEESCC------CCCEEEEEEEEETTEEEEEEECCCCCSCS
T ss_pred CccccEEEEEEEEcCC-------------CCEEEEEEE-EeECCCCcCCCCCCCeEEEEEEEeCCeEeceEecCcccCCC
Confidence 3456888888888876 789999999 999999 7788899 999 267999999999
Q ss_pred CCccCcEEEEEecCC---CcEEEEEEEeCCCCCCCCceeEEEEEeccccccccCccceecCcc
Q psy3954 91 SPFFGEEFQFDIPRR---FRHLAVYAYDRDRTSKTDRVLGKVTIQRSDLHRISNKEHWFPLTP 150 (268)
Q Consensus 91 nP~wne~f~f~v~~~---~~~l~~~v~d~d~~~~~d~~iG~~~i~l~~l~~~~~~~~w~~L~~ 150 (268)
||+|||+|.|.++.. ...|.|+|||++ .+++|++||++.+++.+ .....+.|++|..
T Consensus 79 nP~wne~f~f~v~~~~l~~~~l~v~V~d~d-~~~~~~~lG~~~i~l~~--~~~~~~~W~~l~~ 138 (153)
T 1w15_A 79 NAVFNELFVFDIPCESLEEISVEFLVLDSE-RGSRNEVIGRLVLGATA--EGSGGGHWKEICD 138 (153)
T ss_dssp SEEEEEEEEEECCSSSSTTEEEEEEEEECC-TTSCCEEEEEEEESTTC--CSHHHHHHHHHHH
T ss_pred CCeecceEEEECCHHHhCceEEEEEEEeCC-CCCCCcEEEEEEECCCC--CchHHHHHHHHHh
Confidence 999999999998776 478999999999 78899999999999987 3445677877754
No 57
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.79 E-value=6.1e-19 Score=137.51 Aligned_cols=109 Identities=21% Similarity=0.313 Sum_probs=91.7
Q ss_pred cccceEEEeeeeeeccCcccccccccccCCCeEEEEEEEcccCccc--cCCCCCC-ceE----------EEeeecccCCC
Q psy3954 23 ATYKLMVKHTAYKYYLQPRKRLTANQIIQDLGTLRIRIQYTADHIL--QPHYYED-LCT----------QILNSPSVNPV 89 (268)
Q Consensus 23 ~~~~l~~~~~~~~y~~~p~~~~~~~~~~~~~~~L~V~v~~~a~~L~--~~~~~~d-yv~----------~~~~T~~~~~t 89 (268)
.....|.+..++.|... .+.|.|+|+ +|++|+ +..|.+| ||+ ..+||+++++|
T Consensus 19 ~~~~~G~l~~~l~y~~~-------------~~~L~V~v~-~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t 84 (166)
T 2cm5_A 19 DIEERGKILVSLMYSTQ-------------QGGLIVGII-RCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKT 84 (166)
T ss_dssp -CCCCCEEEEEEEEETT-------------TTEEEEEEE-EEESCCCCSTTSCCCEEEEEEEETC---CCEEECCCCCSC
T ss_pred CcCccceEEEEEEEECC-------------CCEEEEEEE-EeECCCCccCCCCCCcEEEEEEECCCCccceEeCCcccCC
Confidence 34567889999888866 789999999 999999 7788999 998 37899999999
Q ss_pred CCCccCcEEEEEecCC---CcEEEEEEEeCCCCCCCCceeEEEEEeccccccccCccceecC
Q psy3954 90 TSPFFGEEFQFDIPRR---FRHLAVYAYDRDRTSKTDRVLGKVTIQRSDLHRISNKEHWFPL 148 (268)
Q Consensus 90 ~nP~wne~f~f~v~~~---~~~l~~~v~d~d~~~~~d~~iG~~~i~l~~l~~~~~~~~w~~L 148 (268)
+||+|||+|.|.++.. ...|.|+|||++ .+++|++||++.+++.++. ...+.|++|
T Consensus 85 ~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d-~~~~~~~iG~~~i~l~~~~--~~~~~W~~l 143 (166)
T 2cm5_A 85 LNPEFNEEFFYDIKHSDLAKKSLDISVWDYD-IGKSNDYIGGCQLGISAKG--ERLKHWYEC 143 (166)
T ss_dssp SSCEEEEEEEEECCGGGGGGCEEEEEEEECC-SSSCCEEEEEEEEETTCCH--HHHHHHHHH
T ss_pred CCCcccceEEEEcchHhcCCCEEEEEEEECC-CCCCCcEEEeEEEecccCC--chhHHHHHH
Confidence 9999999999998764 569999999999 7889999999999999753 233444444
No 58
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.77 E-value=5e-19 Score=132.88 Aligned_cols=94 Identities=24% Similarity=0.290 Sum_probs=81.6
Q ss_pred CCeEEEEEceecCCC--CCCCCCCCEEEEEEEecCCcceeeeceeccCCCCCccceEEEEEccCCCCceEEEEEEecCCC
Q psy3954 169 PTSLMVNVNEASGLT--QVNGQCDPTAMVTVHYTHNKSDVQKSKVKKKSHSPVFNESFMFDRSLGDPIELVVSLHHDISG 246 (268)
Q Consensus 169 ~~~L~v~v~~a~~L~--~~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~~ne~f~f~v~~~~~~~l~i~V~d~~~~ 246 (268)
.+.|.|+|++|++|+ +..|.+||||++.+. ..+++|+++++++||+|||+|.|.+... ...|.|+|||++..
T Consensus 12 ~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~-----~~~~kT~~~~~t~nP~wne~f~f~~~~~-~~~l~i~V~d~d~~ 85 (133)
T 2ep6_A 12 VGILQVKVLKAADLLAADFSGKSDPFCLLELG-----NDRLQTHTVYKNLNPEWNKVFTFPIKDI-HDVLEVTVFDEDGD 85 (133)
T ss_dssp SEEEEEEEEEEESCCCSSSSSCCCEEEEEEET-----TEEEECCCCSSCSSCCCCEEEEEEESCT-TCEEEEEEEEEETT
T ss_pred ceEEEEEEEeeECCCCCCCCCCcCeEEEEEEC-----CEEEEeeeecCCCCCccccEEEEEecCC-CCEEEEEEEECCCC
Confidence 577899999999997 556889999999997 4578999999999999999999998643 23499999999998
Q ss_pred -CCeeeEEEEEeCCccCCCCCCC
Q psy3954 247 -LNVFLGEVHIPLNNKETSSSWW 268 (268)
Q Consensus 247 -~~~~lG~~~l~l~~~~~~~~~w 268 (268)
++++||++.+++.++..+...|
T Consensus 86 ~~~~~lG~~~i~l~~l~~~~~~w 108 (133)
T 2ep6_A 86 KPPDFLGKVAIPLLSIRDGQPNC 108 (133)
T ss_dssp EEEEECCBCEEEGGGCCSSCCEE
T ss_pred CCCCeeEEEEEEHHHccCCCceE
Confidence 8999999999999998766555
No 59
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.77 E-value=1.2e-18 Score=129.43 Aligned_cols=95 Identities=18% Similarity=0.224 Sum_probs=81.4
Q ss_pred CCeEEEEEceecCCCC-----CCCCCCCEEEEEEEecCCcceeeeceeccCCCCCccceEEEEEccCCCCceEEEEEEec
Q psy3954 169 PTSLMVNVNEASGLTQ-----VNGQCDPTAMVTVHYTHNKSDVQKSKVKKKSHSPVFNESFMFDRSLGDPIELVVSLHHD 243 (268)
Q Consensus 169 ~~~L~v~v~~a~~L~~-----~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~~ne~f~f~v~~~~~~~l~i~V~d~ 243 (268)
.+.|.|+|++|++|+. ..|.+||||++++... ...+++|+++++++||+|||+|.|.+.......|.|+|||+
T Consensus 2 ~~~L~v~v~~a~~L~~~~~~d~~g~~dpyv~v~~~~~--~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~l~i~V~d~ 79 (126)
T 1rlw_A 2 SHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTT--PDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDA 79 (126)
T ss_dssp CEEEEEEEEEEESCCSCHHHHHHCCCCEEEEEECTTS--TTCCEECCCCTTCSSCEEEEEEEEEECTTSCCEEEEEEEEC
T ss_pred CcEEEEEEEeeeCCCCCCccccCCCCCCEEEEEEccC--CCceEEccccCCCCCCcccceEEEEecCCCCCEEEEEEEEC
Confidence 4689999999999984 3588999999999722 23678999999999999999999998665555699999999
Q ss_pred CCCCCeeeEEEEEeCCccCCCC
Q psy3954 244 ISGLNVFLGEVHIPLNNKETSS 265 (268)
Q Consensus 244 ~~~~~~~lG~~~l~l~~~~~~~ 265 (268)
+..++++||++.++++++..+.
T Consensus 80 d~~~~~~iG~~~i~l~~l~~~~ 101 (126)
T 1rlw_A 80 NYVMDETLGTATFTVSSMKVGE 101 (126)
T ss_dssp CSSCCEEEEEEEEEGGGSCTTC
T ss_pred CCCCCceeEEEEEEHHHccCCC
Confidence 8778999999999999987654
No 60
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.77 E-value=3.8e-18 Score=144.24 Aligned_cols=106 Identities=26% Similarity=0.383 Sum_probs=92.7
Q ss_pred cceEEEEEEEEc--CCeEEEEEceecCCC--CCCCCCCCEEEEEEEecCCcceeeeceeccCCCCCccceEEEEEccCCC
Q psy3954 157 VQGKIQIGVLST--PTSLMVNVNEASGLT--QVNGQCDPTAMVTVHYTHNKSDVQKSKVKKKSHSPVFNESFMFDRSLGD 232 (268)
Q Consensus 157 ~~G~i~v~l~~~--~~~L~v~v~~a~~L~--~~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~~ne~f~f~v~~~~ 232 (268)
..|+|.+++.|. .+.|.|+|++|++|+ +..|.+||||++++..+ ...+++|+++++++||+|||+|.|.+...+
T Consensus 4 ~~G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~--~~~~~~T~~~~~~~nP~wne~f~f~v~~~~ 81 (284)
T 2r83_A 4 KLGKLQYSLDYDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPD--KKKKFETKVHRKTLNPVFNEQFTFKVPYSE 81 (284)
T ss_dssp CCCEEEEEEEEETTTTEEEEEEEEEECCCCCSSSSSCCEEEEEEEETC--TTSCEECCCCCSCSSCEEEEEEEECCCGGG
T ss_pred ceeEEEEEEEEECCCCEEEEEEEEeeCCCCCCCCCCCCeEEEEEEEcC--CCceEeCCcccCCCCCeeCceEEEEechHH
Confidence 479999999995 999999999999997 55678999999999732 234789999999999999999999987766
Q ss_pred Cc--eEEEEEEecCCC-CCeeeEEEEEeCCccCCC
Q psy3954 233 PI--ELVVSLHHDISG-LNVFLGEVHIPLNNKETS 264 (268)
Q Consensus 233 ~~--~l~i~V~d~~~~-~~~~lG~~~l~l~~~~~~ 264 (268)
+. .|.|+|||++.+ ++++||++.++|.++..+
T Consensus 82 ~~~~~l~~~V~d~d~~~~~~~lG~~~i~l~~l~~~ 116 (284)
T 2r83_A 82 LAGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFG 116 (284)
T ss_dssp CTTCEEEEEEEECCSSSCCCEEEEEEEEGGGCCCS
T ss_pred hCcCEEEEEEEECCCCCCCceeEEEEEcchhcccC
Confidence 54 399999999988 899999999999998664
No 61
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.76 E-value=2.8e-18 Score=129.83 Aligned_cols=90 Identities=23% Similarity=0.266 Sum_probs=79.2
Q ss_pred CCeEEEEEceecCCC--CCCCCCCCEEEEEEEecCCcceeeeceeccCCCCCccceEEEEEccCCCC---ceEEEEEEec
Q psy3954 169 PTSLMVNVNEASGLT--QVNGQCDPTAMVTVHYTHNKSDVQKSKVKKKSHSPVFNESFMFDRSLGDP---IELVVSLHHD 243 (268)
Q Consensus 169 ~~~L~v~v~~a~~L~--~~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~~ne~f~f~v~~~~~---~~l~i~V~d~ 243 (268)
.+.|.|+|++|++|+ +. |.+||||++++. ..+++|+++++++||+|||.|.|.+....+ ..|.|+|||+
T Consensus 6 ~g~L~v~v~~a~~L~~~~~-g~~dpyv~v~~~-----~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~~l~i~V~d~ 79 (140)
T 2dmh_A 6 SGMLRVIVESASNIPKTKF-GKPDPIVSVIFK-----DEKKKTKKVDNELNPVWNEILEFDLRGIPLDFSSSLGIIVKDF 79 (140)
T ss_dssp CCEEEEEEEEEESCCCCSS-SCCCEEEEEECS-----SCEEECCCCCSCSSCEEEEEEEEECSSCCCCTTCEEEEEEEET
T ss_pred CcEEEEEEEEeeCCCCCCC-CCCCeEEEEEEC-----CEeEEeeeecCCCCCccCcEEEEEecccccCCCCEEEEEEEEC
Confidence 478999999999997 44 889999999997 457999999999999999999999976533 3399999999
Q ss_pred CCC-CCeeeEEEEEeCCccCCC
Q psy3954 244 ISG-LNVFLGEVHIPLNNKETS 264 (268)
Q Consensus 244 ~~~-~~~~lG~~~l~l~~~~~~ 264 (268)
+.. ++++||++.+++.++..+
T Consensus 80 d~~~~~~~lG~~~i~l~~l~~~ 101 (140)
T 2dmh_A 80 ETIGQNKLIGTATVALKDLTGD 101 (140)
T ss_dssp TCSSSCCCCEEEEEEGGGTCSS
T ss_pred CCCCCCceEEEEEEEHHHhccC
Confidence 998 899999999999998664
No 62
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.75 E-value=3.8e-18 Score=130.38 Aligned_cols=94 Identities=22% Similarity=0.360 Sum_probs=80.7
Q ss_pred CCeEEEEEceecCCC--CCCCCCCCEEEEEEEecCCcceeeeceeccCCCCCccceEEEEEccCCCCceEEEEEEecCCC
Q psy3954 169 PTSLMVNVNEASGLT--QVNGQCDPTAMVTVHYTHNKSDVQKSKVKKKSHSPVFNESFMFDRSLGDPIELVVSLHHDISG 246 (268)
Q Consensus 169 ~~~L~v~v~~a~~L~--~~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~~ne~f~f~v~~~~~~~l~i~V~d~~~~ 246 (268)
.+.|.|+|++|++|+ +..|.+||||++.+. ..+++|+++++++||.|||.|.|.+.... +.|.|+|||++..
T Consensus 16 ~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~-----~~~~kT~~~~~t~nP~Wne~f~f~v~~~~-~~l~~~v~d~d~~ 89 (148)
T 3kwu_A 16 SAKISITVVCAQGLQAKDKTGSSDPYVTVQVG-----KTKKRTKTIYGNLNPVWEENFHFECHNSS-DRIKVRVLDEDDD 89 (148)
T ss_dssp CEEEEEEEEEEESCCCCSTTSCCCEEEEEEET-----TEEEECCCCCSCSSCEEEEEEEEEECSTT-CEEEEEEEECCCS
T ss_pred ccEEEEEEEeeeCCCCCCCCCCcCeEEEEEEC-----CEEEECCccCCCCCCCcccEEEEEecCCC-CEEEEEEEECCCC
Confidence 688999999999997 567889999999995 56789999999999999999999986543 4599999999873
Q ss_pred ------------CCeeeEEEEEeCCccCCCCCCC
Q psy3954 247 ------------LNVFLGEVHIPLNNKETSSSWW 268 (268)
Q Consensus 247 ------------~~~~lG~~~l~l~~~~~~~~~w 268 (268)
++++||++.++++++..+...|
T Consensus 90 ~~~~~~~~~~~~~~~~lG~~~i~l~~l~~~~~~w 123 (148)
T 3kwu_A 90 IKSRVKQRFKRESDDFLGQTIIEVRTLSGEMDVW 123 (148)
T ss_dssp HHHHHHTTTSSCSSEEEEEEEEEGGGCCSEEEEE
T ss_pred ccccccccccCCCCccEEEEEEEHHHCcCCCCEE
Confidence 7999999999999986544333
No 63
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.74 E-value=6.6e-18 Score=143.70 Aligned_cols=100 Identities=24% Similarity=0.340 Sum_probs=87.8
Q ss_pred ccceEEEEEEEEc--CCeEEEEEceecCCC--CCCCCCCCEEEEEEEecCCcceeeeceeccCCCCCccceEEEEEccCC
Q psy3954 156 EVQGKIQIGVLST--PTSLMVNVNEASGLT--QVNGQCDPTAMVTVHYTHNKSDVQKSKVKKKSHSPVFNESFMFDRSLG 231 (268)
Q Consensus 156 ~~~G~i~v~l~~~--~~~L~v~v~~a~~L~--~~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~~ne~f~f~v~~~ 231 (268)
...|+|.+++.|. .+.|.|+|++|++|+ +..|.+||||++++..+ ...+++|+++++++||+|||+|.|.+...
T Consensus 4 ~~~G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~g~~dPyv~v~l~~~--~~~~~kT~v~~~t~nP~wne~f~f~v~~~ 81 (296)
T 1dqv_A 4 APCGRISFALRYLYGSDQLVVRILQALDLPAKDSNGFSDPYVKIYLLPD--RKKKFQTKVHRKTLNPIFNETFQFSVPLA 81 (296)
T ss_dssp CSSCEEEEEEECCSSSCEEEEEEEEEECCCCCSTTSCCCEEEEEECTTS--TTSCEECCCCCSCSSCEEEEEEEEECCGG
T ss_pred CeeeEEEEEEEEeCCCCEEEEEEEEeECCCCcCCCCCcCeEEEEEEEcC--CCeeEeCCccCCCCCCcEeeEEEEEecHH
Confidence 3479999999997 889999999999997 55788999999998622 24678999999999999999999999776
Q ss_pred CCce--EEEEEEecCCC-CCeeeEEEEEe
Q psy3954 232 DPIE--LVVSLHHDISG-LNVFLGEVHIP 257 (268)
Q Consensus 232 ~~~~--l~i~V~d~~~~-~~~~lG~~~l~ 257 (268)
++.. |.|+|||+|.+ ++++||++.++
T Consensus 82 ~l~~~~L~~~V~d~d~~~~~~~iG~~~i~ 110 (296)
T 1dqv_A 82 ELAQRKLHFSVYDFDRFSRHDLIGQVVLD 110 (296)
T ss_dssp GGSSCCCEEEEEECCSSSCCCEEEEEECC
T ss_pred HhcCCEEEEEEEEcCCCCCCceEEEEEec
Confidence 6653 99999999998 89999999996
No 64
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.74 E-value=2.6e-17 Score=126.41 Aligned_cols=96 Identities=27% Similarity=0.338 Sum_probs=77.6
Q ss_pred CCeEEEEEceecCCC--CCCCCCCCEEEEEEEecCC-cceeeeceeccCCCCCccceEEEEEccCCCCceEEEEEEecCC
Q psy3954 169 PTSLMVNVNEASGLT--QVNGQCDPTAMVTVHYTHN-KSDVQKSKVKKKSHSPVFNESFMFDRSLGDPIELVVSLHHDIS 245 (268)
Q Consensus 169 ~~~L~v~v~~a~~L~--~~~g~~dpyv~v~l~~~~~-~~~~~kT~v~~~t~nP~~ne~f~f~v~~~~~~~l~i~V~d~~~ 245 (268)
.+.|.|+|++|++|+ +..|.+||||++++..... ...+++|+++++++||+|||+|.|.+... ...|.|+|||++.
T Consensus 19 ~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~-~~~l~~~V~d~d~ 97 (153)
T 3b7y_A 19 SRIVRVRVIAGIGLAKKDILGASDPYVRVTLYDPMNGVLTSVQTKTIKKSLNPKWNEEILFRVHPQ-QHRLLFEVFDENR 97 (153)
T ss_dssp CEEEEEEEEEEESCC-------CCEEEEEEEEETTTEEEEEEECCCCSSCSSCCCCEEEEEEECTT-TCEEEEEEEECCS
T ss_pred ccEEEEEEEEeeCCCCCCCCCCCCcEEEEEEECCCCccceeeeCccccCCCCCCCCCEEEEEecCC-CCEEEEEEEECCC
Confidence 467889999999997 4567899999999983322 24678999999999999999999998753 2349999999999
Q ss_pred C-CCeeeEEEEEeCCccCCCC
Q psy3954 246 G-LNVFLGEVHIPLNNKETSS 265 (268)
Q Consensus 246 ~-~~~~lG~~~l~l~~~~~~~ 265 (268)
. ++++||++.|++.++..+.
T Consensus 98 ~~~d~~iG~~~i~l~~l~~~~ 118 (153)
T 3b7y_A 98 LTRDDFLGQVDVPLYPLPTEN 118 (153)
T ss_dssp SSCCEEEEEEEEECCSCCBCC
T ss_pred CcCCCeeEEEEEEHHHcccCC
Confidence 8 8999999999999987643
No 65
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.73 E-value=5.8e-18 Score=130.08 Aligned_cols=88 Identities=23% Similarity=0.343 Sum_probs=74.6
Q ss_pred CCeEEEEEceecCCCCC------------CCCCCCEEEEEEEecCCcceeeeceeccCCCCCccceEEEEEccCCCCceE
Q psy3954 169 PTSLMVNVNEASGLTQV------------NGQCDPTAMVTVHYTHNKSDVQKSKVKKKSHSPVFNESFMFDRSLGDPIEL 236 (268)
Q Consensus 169 ~~~L~v~v~~a~~L~~~------------~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~~ne~f~f~v~~~~~~~l 236 (268)
.+.|.|+|++|++|+.. .|.+||||++.+. .....+|+++++++||+|||.|.|.+.. ...|
T Consensus 28 ~g~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~----~~~~~kT~v~~ktlnP~WNE~F~f~v~~--~~~L 101 (157)
T 2fk9_A 28 NGYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVD----QVRVGQTSTKQKTNKPTYNEEFCANVTD--GGHL 101 (157)
T ss_dssp EEEEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEET----TEEEEECCCCSSCSSCEEEEEEEEEEEE--ECEE
T ss_pred ccEEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEEC----CEeeEEeeecCCCCCCccCcEEEEEcCC--CCEE
Confidence 57899999999999732 2679999999986 1335799999999999999999999853 2349
Q ss_pred EEEEEecCCC-CCeeeEEEEEeCCccC
Q psy3954 237 VVSLHHDISG-LNVFLGEVHIPLNNKE 262 (268)
Q Consensus 237 ~i~V~d~~~~-~~~~lG~~~l~l~~~~ 262 (268)
.|+|||++.+ ++++||++.|++.++.
T Consensus 102 ~~~V~D~d~~~~dd~iG~~~i~l~~l~ 128 (157)
T 2fk9_A 102 ELAVFHETPLGYDHFVANCTLQFQELL 128 (157)
T ss_dssp EEEEEECCSSSSCEEEEEEEEEHHHHH
T ss_pred EEEEEECCCCCCCCEEEEEEEEHHHhh
Confidence 9999999988 8999999999998775
No 66
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.73 E-value=1.4e-17 Score=124.56 Aligned_cols=112 Identities=20% Similarity=0.266 Sum_probs=82.1
Q ss_pred CeEEEEEEEcccCccccCCCCCC-ceE---EEeeecccC-CCCCCccCcEEEEEecCCCcEEEEEEEeCCCCCCCCceeE
Q psy3954 53 LGTLRIRIQYTADHILQPHYYED-LCT---QILNSPSVN-PVTSPFFGEEFQFDIPRRFRHLAVYAYDRDRTSKTDRVLG 127 (268)
Q Consensus 53 ~~~L~V~v~~~a~~L~~~~~~~d-yv~---~~~~T~~~~-~t~nP~wne~f~f~v~~~~~~l~~~v~d~d~~~~~d~~iG 127 (268)
.+.|.|+|+ +|++|+ ..|.+| ||+ +..+|++++ +++||+|||+|.|.+......|.|+|||+| +++|++||
T Consensus 4 ~~~L~V~V~-~A~~l~-~~g~~DPYv~v~~~~~kt~~~~~~t~nP~WnE~f~f~v~~~~~~L~~~V~D~d--~~~dd~iG 79 (131)
T 2cjt_A 4 MSLLCVGVK-KAKFDG-AQEKFNTYVTLKVQNVKSTTIAVRGSQPSWEQDFMFEINRLDLGLTVEVWNKG--LIWDTMVG 79 (131)
T ss_dssp CEEEEEEEE-EEECSS-CGGGCEEEEEEEETTEEEECCCEESSSCEEEEEEEEEECCCSSEEEEEEEECC--SSCEEEEE
T ss_pred ceEEEEEEE-EeECCC-CCCCcCeEEEEEecCEEEeEecCCCCCceECCEEEEEEeCCCCeEEEEEEECC--CCCCCeEE
Confidence 578999999 999886 467889 999 344566655 699999999999999877778999999999 56799999
Q ss_pred EEEEecccccccc--CccceecCccc--CCCcc-------cceEEEEEEEEc
Q psy3954 128 KVTIQRSDLHRIS--NKEHWFPLTPV--TQDSE-------VQGKIQIGVLST 168 (268)
Q Consensus 128 ~~~i~l~~l~~~~--~~~~w~~L~~~--~~~~~-------~~G~i~v~l~~~ 168 (268)
++.++|+++.... ....|.++... ..+.. ..+.+.+.++|+
T Consensus 80 ~~~i~l~~l~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~p~~~~~~~~~~~~ 131 (131)
T 2cjt_A 80 TVWIPLRTIRQSNEEGPGEWLTLDSQAIMADSEICGTKDPTFHRILLDAHFE 131 (131)
T ss_dssp EEEEEGGGSCBCSSCCCCEEEECBC----------CCSCCCCCEEEEEEEEC
T ss_pred EEEEEHHHhhhcCCCCccccEEcccccccCCCcCcceECCCccEEEEEEEeC
Confidence 9999999986432 12234444321 11222 234577777764
No 67
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.72 E-value=3.9e-17 Score=128.47 Aligned_cols=95 Identities=25% Similarity=0.317 Sum_probs=77.7
Q ss_pred CCeEEEEEceecCCC--CCCCCCCCEEEEEEEecCC-cceeeeceeccCCCCCccceEEEEEccCCCCceEEEEEEecCC
Q psy3954 169 PTSLMVNVNEASGLT--QVNGQCDPTAMVTVHYTHN-KSDVQKSKVKKKSHSPVFNESFMFDRSLGDPIELVVSLHHDIS 245 (268)
Q Consensus 169 ~~~L~v~v~~a~~L~--~~~g~~dpyv~v~l~~~~~-~~~~~kT~v~~~t~nP~~ne~f~f~v~~~~~~~l~i~V~d~~~ 245 (268)
.+.|.|+|++|++|+ +..|.+||||++++..... ...+++|+++++++||.|||.|.|.+... ...|.|+|||++.
T Consensus 7 ~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~v~~~-~~~L~~~V~d~d~ 85 (176)
T 3m7f_B 7 TRVVRVKVIAGIGLAKKDILGASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFRVLPQ-RHRILFEVFDENR 85 (176)
T ss_dssp CEEEEEEEEEEESCC---CCCCCCEEEEEEEEETTTEEEEEEECCCCSSCSSCEEEEEEEEEECTT-TCEEEEEEEECC-
T ss_pred cEEEEEEEEEeeCCCCcCCCCCcCcEEEEEEECCCCCcccceeCceECCCCCCcccceEEEEEcCC-CCEEEEEEEECCC
Confidence 467899999999997 5678899999999983222 12678999999999999999999998743 2459999999999
Q ss_pred C-CCeeeEEEEEeCCccCCC
Q psy3954 246 G-LNVFLGEVHIPLNNKETS 264 (268)
Q Consensus 246 ~-~~~~lG~~~l~l~~~~~~ 264 (268)
+ ++++||++.|+|..+..+
T Consensus 86 ~~~d~~lG~~~i~l~~l~~~ 105 (176)
T 3m7f_B 86 LTRDDFLGQVDVPLYPLPTE 105 (176)
T ss_dssp ---CEEEEEEEEESCSCCBC
T ss_pred CCCCcEEEEEEEEHHHcccc
Confidence 8 899999999999999764
No 68
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.71 E-value=2e-17 Score=123.91 Aligned_cols=87 Identities=20% Similarity=0.215 Sum_probs=75.1
Q ss_pred CeEEEEEceecCCC--CCCCCCCCEEEEEEEecCCcceeeeceeccCCCCCccceEEEEEccCCCCceEEEEEEecCCC-
Q psy3954 170 TSLMVNVNEASGLT--QVNGQCDPTAMVTVHYTHNKSDVQKSKVKKKSHSPVFNESFMFDRSLGDPIELVVSLHHDISG- 246 (268)
Q Consensus 170 ~~L~v~v~~a~~L~--~~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~~ne~f~f~v~~~~~~~l~i~V~d~~~~- 246 (268)
..|.|+|++|++|+ +..|.+||||++.+... ..+++|+++++++||+|||+|.|.+...+ .|.|+|||++..
T Consensus 5 ~~L~V~v~~a~~L~~~d~~g~sDpyv~v~~~~~---~~~~kT~v~~~t~nP~wne~f~f~v~~~~--~l~~~v~d~d~~~ 79 (132)
T 3pyc_A 5 IKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGS---GQCHSTDTVKNTLDPKWNQHYDLYVGKTD--SITISVWNHKKIH 79 (132)
T ss_dssp EEEEEEEEEEESCCCCSTTCCCCEEEEEEETTT---CCEEECCCCSSCSSCEEEEEEEEEEETTC--CEEEEEEEGGGTT
T ss_pred EEEEEEEEEeECCCCCCCCCCcCeEEEEEECCC---CceEECCccCCCCCCCccCEEEEEeCCCC--EEEEEEEECCCCC
Confidence 46899999999996 56788999999998622 36789999999999999999999986543 399999999988
Q ss_pred C---CeeeEEEEEeCCcc
Q psy3954 247 L---NVFLGEVHIPLNNK 261 (268)
Q Consensus 247 ~---~~~lG~~~l~l~~~ 261 (268)
+ +++||++.++++++
T Consensus 80 ~~~~d~~lG~~~i~l~~l 97 (132)
T 3pyc_A 80 KKQGAGFLGCVRLLSNAI 97 (132)
T ss_dssp SSTTTTEEEEEEECHHHH
T ss_pred CCCCCCceEEEEEeHHHh
Confidence 4 79999999998876
No 69
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.70 E-value=1.7e-17 Score=124.94 Aligned_cols=86 Identities=30% Similarity=0.408 Sum_probs=75.5
Q ss_pred CeEEEEEceecCCC--CCCCCCCCEEEEEEEecCCcceeeeceecc-CCCCCccceEEEEEccCCCCceEEEEEEecCCC
Q psy3954 170 TSLMVNVNEASGLT--QVNGQCDPTAMVTVHYTHNKSDVQKSKVKK-KSHSPVFNESFMFDRSLGDPIELVVSLHHDISG 246 (268)
Q Consensus 170 ~~L~v~v~~a~~L~--~~~g~~dpyv~v~l~~~~~~~~~~kT~v~~-~t~nP~~ne~f~f~v~~~~~~~l~i~V~d~~~~ 246 (268)
+.|.|+|++|++|+ +..|.+||||++++. ..+++|++++ ++.||+|||+|.|.+.. ....|.|+|||++.+
T Consensus 10 ~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~-----~~~~kT~~~~~~~~nP~Wne~f~f~v~~-~~~~l~~~V~d~~~~ 83 (136)
T 1wfj_A 10 GTLEVVLVSAKGLEDADFLNNMDPYVQLTCR-----TQDQKSNVAEGMGTTPEWNETFIFTVSE-GTTELKAKIFDKDVG 83 (136)
T ss_dssp EEEEEEEEEEEECSSCCSSCSSCCCEEEESS-----SCEEECCCCTTCCSSCEEEEEEEEEEES-SCCEEEEEECCSSSC
T ss_pred EEEEEEEEeccCCCCcccCCCcCceEEEEEC-----CccceeEeccCCCCCCccCcEEEEEECC-CCCEEEEEEEECCCC
Confidence 67889999999997 456789999999987 3467999998 89999999999999875 334499999999988
Q ss_pred -CCeeeEEEEEeCCcc
Q psy3954 247 -LNVFLGEVHIPLNNK 261 (268)
Q Consensus 247 -~~~~lG~~~l~l~~~ 261 (268)
++++||++.|++.++
T Consensus 84 ~~d~~lG~~~i~l~~l 99 (136)
T 1wfj_A 84 TEDDAVGEATIPLEPV 99 (136)
T ss_dssp TTTCCSEEEEEESHHH
T ss_pred CCCceEEEEEEEHHHh
Confidence 899999999999887
No 70
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.70 E-value=1.5e-17 Score=125.21 Aligned_cols=89 Identities=21% Similarity=0.344 Sum_probs=74.9
Q ss_pred CCeEEEEEceecCCCCC--CC-----------CCCCEEEEEEEecCCcceeeeceeccCCCCCccceEEEEEccCCCCce
Q psy3954 169 PTSLMVNVNEASGLTQV--NG-----------QCDPTAMVTVHYTHNKSDVQKSKVKKKSHSPVFNESFMFDRSLGDPIE 235 (268)
Q Consensus 169 ~~~L~v~v~~a~~L~~~--~g-----------~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~~ne~f~f~v~~~~~~~ 235 (268)
.+.|.|+|++|++|+.. .+ .+||||++.+. .....+|+++++++||+|||+|.|.+... ..
T Consensus 5 ~g~L~v~v~~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l~----~~~~~~T~~~~~t~nP~WnE~f~f~v~~~--~~ 78 (136)
T 1gmi_A 5 NGLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVD----DSRIGQTATKQKTNSPAWHDEFVTDVCNG--RK 78 (136)
T ss_dssp EEEEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEET----TEEEEECCCCSSCSSCEEEEEEEEEEEEE--CE
T ss_pred ceEEEEEEEeCcCCCCcccccccccccccCCcCcCcEEEEEEC----CeEeeeeeEECCCcCCccCCEEEEEecCC--CE
Confidence 36799999999999732 22 39999999985 13457899999999999999999998643 45
Q ss_pred EEEEEEecCCC-CCeeeEEEEEeCCccCC
Q psy3954 236 LVVSLHHDISG-LNVFLGEVHIPLNNKET 263 (268)
Q Consensus 236 l~i~V~d~~~~-~~~~lG~~~l~l~~~~~ 263 (268)
|.|+|||++.. ++++||++.++++++..
T Consensus 79 L~~~V~d~d~~~~dd~iG~~~i~l~~l~~ 107 (136)
T 1gmi_A 79 IELAVFHDAPIGYDDFVANCTIQFEELLQ 107 (136)
T ss_dssp EEEEEEECCSSSSCEEEEEEEEEHHHHTS
T ss_pred EEEEEEeCCCCCCCCEEEEEEEEHHHhcc
Confidence 99999999988 89999999999998865
No 71
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.69 E-value=8.2e-17 Score=146.82 Aligned_cols=110 Identities=19% Similarity=0.301 Sum_probs=94.9
Q ss_pred CCCeEEEEEEEcccCccc--cCCCCCC-ceE-----EEeeecccCCCCCCccCcEEEEEecCC-CcEEEEEEEeCCCCCC
Q psy3954 51 QDLGTLRIRIQYTADHIL--QPHYYED-LCT-----QILNSPSVNPVTSPFFGEEFQFDIPRR-FRHLAVYAYDRDRTSK 121 (268)
Q Consensus 51 ~~~~~L~V~v~~~a~~L~--~~~~~~d-yv~-----~~~~T~~~~~t~nP~wne~f~f~v~~~-~~~l~~~v~d~d~~~~ 121 (268)
.+.+.|.|+|+ +|++|+ +..|.+| ||+ ..++|+++++|+||+|||+|.|.+... ...|.|+|||+| .++
T Consensus 384 ~~~~~l~v~v~-~a~~L~~~d~~~~sdpyv~v~~~~~~~~T~~~~~t~nP~w~e~f~f~~~~~~~~~l~~~v~d~d-~~~ 461 (510)
T 3jzy_A 384 SGIGRLMVHVI-EATELKACKPNGKSNPYCEISMGSQSYTTRTIQDTLNPKWNFNCQFFIKDLYQDVLCLTLFDRD-QFS 461 (510)
T ss_dssp --CEEEEEEEE-EEESCCCCSTTSCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEESCTTTCEEEEEEEECC-SSS
T ss_pred CCCceEEEEec-eeecCCCCCCCCCCCeEEEEEECCeeccCCccCCCCCCccCceEEEEecCCCCCEEEEEEEeCC-CCC
Confidence 45689999999 999998 7789999 999 789999999999999999999998776 578999999999 788
Q ss_pred CCceeEEEEEeccccccccC----ccceecCcccCCCcccceEEEEEEEE
Q psy3954 122 TDRVLGKVTIQRSDLHRISN----KEHWFPLTPVTQDSEVQGKIQIGVLS 167 (268)
Q Consensus 122 ~d~~iG~~~i~l~~l~~~~~----~~~w~~L~~~~~~~~~~G~i~v~l~~ 167 (268)
+|++||++.+++.++..+.. ...|++|.+. ..|+|.+++.+
T Consensus 462 ~~d~lG~~~~~l~~l~~~~~~~~~~~~~~~l~~~-----~~G~i~l~~~l 506 (510)
T 3jzy_A 462 PDDFLGRTEIPVAKIRTEQESKGPMTRRLLLHEV-----PTGEVWVRFDL 506 (510)
T ss_dssp SCCEEEEEEEEHHHHHHHHHHHCSCCEEEECBSS-----SSCEEEEEEEE
T ss_pred CCCceEEEEEEHHHhccccCCCCceeeeecCCCC-----CCceEEEEEEE
Confidence 99999999999999875443 6789988754 26888887764
No 72
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.69 E-value=8.1e-17 Score=119.37 Aligned_cols=110 Identities=12% Similarity=0.145 Sum_probs=93.5
Q ss_pred CeEEEEEEEcccCccccCCCCCC-ceE-----EEeeecccC-CCCCCccCcEEEEEecCC---CcEEEEEEEeCCCCCCC
Q psy3954 53 LGTLRIRIQYTADHILQPHYYED-LCT-----QILNSPSVN-PVTSPFFGEEFQFDIPRR---FRHLAVYAYDRDRTSKT 122 (268)
Q Consensus 53 ~~~L~V~v~~~a~~L~~~~~~~d-yv~-----~~~~T~~~~-~t~nP~wne~f~f~v~~~---~~~l~~~v~d~d~~~~~ 122 (268)
.-.|+|+|. +|.+|| +.+| |++ .+++|++++ +++||+|||.|.|++... +..|.+.|+|++ .+++
T Consensus 20 ~msL~V~l~-~a~~Lp---g~~Dp~akv~FRg~k~kTkvi~~~~~npvfnE~F~wpl~~~ld~~e~L~v~V~d~~-~v~~ 94 (144)
T 3l9b_A 20 HMALIVHLK-TVSELR---GRADRIAKVTFRGQSFYSRVLENCEDVADFDETFRWPVASSIDRNEVLEIQIFNYS-KVFS 94 (144)
T ss_dssp CEEEEEEEE-EEESCC---SCEEEEEEEEETTEEEECCCEEEECSCEEEEEEEEEEESSCCCTTCEEEEEEEEEC-TTSC
T ss_pred cEEEEEEEE-EecCCC---CCCCCeEEEEEeccceeeEEeccCCCCceEcceEEecCCCCCCCCCEEEEEEEECc-cccC
Confidence 457999999 999999 6889 998 899999998 699999999999997766 789999999999 8999
Q ss_pred CceeEEEEEeccccccccCccceecCcccCCCcccceEEEEEEEEc
Q psy3954 123 DRVLGKVTIQRSDLHRISNKEHWFPLTPVTQDSEVQGKIQIGVLST 168 (268)
Q Consensus 123 d~~iG~~~i~l~~l~~~~~~~~w~~L~~~~~~~~~~G~i~v~l~~~ 168 (268)
+++||++.++|+++........+.+|..... ....++|.+++.|.
T Consensus 95 nrlIG~~~i~Lq~lv~~~~l~l~~~LvD~n~-~~~~a~I~l~l~Y~ 139 (144)
T 3l9b_A 95 NKLIGTFRMVLQKVVEENRVEVSDTLIDDNN-AIIKTSLSMEVRYQ 139 (144)
T ss_dssp CEEEEEEEEESHHHHHHSEEEEEEEEECTTS-CEEEEEEEEEEEEE
T ss_pred CCEEEEEEEEhHHhccCCeEEEeecccCCCC-CccccEEEEEEEec
Confidence 9999999999999986665555556654442 23458999999986
No 73
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.69 E-value=1.1e-16 Score=148.48 Aligned_cols=142 Identities=16% Similarity=0.188 Sum_probs=111.2
Q ss_pred eeccccccceEEEeeeeeeccCcccccccccc----------cCCCeEEEEEEEcccCccc--c--CCCCCC-ceE----
Q psy3954 18 LMVNHATYKLMVKHTAYKYYLQPRKRLTANQI----------IQDLGTLRIRIQYTADHIL--Q--PHYYED-LCT---- 78 (268)
Q Consensus 18 ~~~~~~~~~l~~~~~~~~y~~~p~~~~~~~~~----------~~~~~~L~V~v~~~a~~L~--~--~~~~~d-yv~---- 78 (268)
.++|++.|.-+.- ..|.++|......... ....+.|.|+|+ +|++|+ + ..+.+| ||+
T Consensus 454 m~ln~g~F~~ng~---~GYvlKP~~lr~~~~~f~p~~~~~~~~~~~~~L~V~Vi-~A~~L~~~d~~~~~~~DPYV~V~l~ 529 (624)
T 1djx_A 454 MDVYLGCFQDNGG---CGYVLKPAFLRDPNTTFNSRALTQGPWWRPERLRVRII-SGQQLPKVNKNKNSIVDPKVIVEIH 529 (624)
T ss_dssp HHHHHHHHHSGGG---CSEEECCGGGGCTTCCCCTTSCCSSTTCCCEEEEEEEE-EEESCCCCSSCSSSCCCEEEEEEEE
T ss_pred HhHHHHHhhcCCC---CccEECCHHHcCCCCCcCcccccccCCccceEEEEEEE-EcCCCCcccccccCCCCcEEEEEEe
Confidence 4588888875333 2799998875544211 125679999999 999999 4 368899 998
Q ss_pred ------EEeeecccCCC-CCCccCcEEEEEecCC-CcEEEEEEEeCCCCCCCCceeEEEEEeccccccccCccceecCcc
Q psy3954 79 ------QILNSPSVNPV-TSPFFGEEFQFDIPRR-FRHLAVYAYDRDRTSKTDRVLGKVTIQRSDLHRISNKEHWFPLTP 150 (268)
Q Consensus 79 ------~~~~T~~~~~t-~nP~wne~f~f~v~~~-~~~l~~~v~d~d~~~~~d~~iG~~~i~l~~l~~~~~~~~w~~L~~ 150 (268)
.++||++++++ +||+|||+|.|.+... ...|+|+|||+| .+++|++||++.+||..+..+ .+|++|..
T Consensus 530 g~~~d~~~~kTkvi~~ng~NP~WnE~f~F~v~~~el~~L~~~V~D~D-~~~~dd~iG~~~ipl~~L~~G---~r~v~L~d 605 (624)
T 1djx_A 530 GVGRDTGSRQTAVITNNGFNPRWDMEFEFEVTVPDLALVRFMVEDYD-SSSKNDFIGQSTIPWNSLKQG---YRHVHLLS 605 (624)
T ss_dssp SSGGGCEEEECCCCTTCSSSCEEEEEEEEEESCGGGCEEEEEEEECC-SSSCCEEEEEEEEEGGGBCCE---EEEEEEEC
T ss_pred cCCCCcceeecccccCCCCCCccCceEEEEEecCCCCEEEEEEEEcC-CCCCCceeEEEEEEHHHcCCC---cEEEeCCC
Confidence 47899999998 9999999999998876 478999999999 788999999999999999753 35888866
Q ss_pred cCCCcccceEEEEEEEE
Q psy3954 151 VTQDSEVQGKIQIGVLS 167 (268)
Q Consensus 151 ~~~~~~~~G~i~v~l~~ 167 (268)
.....-..|.|.+.+.+
T Consensus 606 ~~g~~~~~~~L~v~i~~ 622 (624)
T 1djx_A 606 KNGDQHPSATLFVKISI 622 (624)
T ss_dssp TTSCEEEEEEEEEEEEE
T ss_pred CCcCCCCceEEEEEEEE
Confidence 54333346788887765
No 74
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.68 E-value=9.6e-17 Score=125.68 Aligned_cols=87 Identities=16% Similarity=0.141 Sum_probs=74.8
Q ss_pred CCeEEEEEceecCCC-C-CCCCCCCEEEEEEEecCCcceeeeceeccCCCCCccceEEEEEccCCCCceEEEEEEecCCC
Q psy3954 169 PTSLMVNVNEASGLT-Q-VNGQCDPTAMVTVHYTHNKSDVQKSKVKKKSHSPVFNESFMFDRSLGDPIELVVSLHHDISG 246 (268)
Q Consensus 169 ~~~L~v~v~~a~~L~-~-~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~~ne~f~f~v~~~~~~~l~i~V~d~~~~ 246 (268)
.+.|.|+|++|++|+ . ..+.+||||++++. ..+++|+++++++||+|||.|.|.+. ....|.|+|||++.+
T Consensus 35 ~~~L~V~V~~A~~L~~~~~~~~sDPYv~v~~~-----~~~~kT~v~~~tlnP~Wne~f~f~v~--~~~~L~~~V~D~d~~ 107 (173)
T 2nq3_A 35 KSQLQITVISAKLKENKKNWFGPSPYVEVTVD-----GQSKKTEKCNNTNSPKWKQPLTVIVT--PVSKLHFRVWSHQTL 107 (173)
T ss_dssp CEEEEEEEEEEEECCCC--CCCCCEEEEEEET-----TEEEECCCCSSCSSCEEEEEEEEEEC--TTCEEEEEEEECCSS
T ss_pred ceEEEEEEEEeECCCCcccCCCCCeEEEEEEC-----CEEeEccccCCCCCCeECCEEEEEeC--CCCEEEEEEEECCCC
Confidence 567899999999997 2 33449999999996 37899999999999999999999884 234499999999998
Q ss_pred -CCeeeEEEEEeCCccC
Q psy3954 247 -LNVFLGEVHIPLNNKE 262 (268)
Q Consensus 247 -~~~~lG~~~l~l~~~~ 262 (268)
++++||++.+++.++.
T Consensus 108 ~~dd~lG~~~i~l~~l~ 124 (173)
T 2nq3_A 108 KSDVLLGTAALDIYETL 124 (173)
T ss_dssp SCCEEEEEEEEEHHHHH
T ss_pred CCCceEEEEEEEHHHhc
Confidence 8999999999998774
No 75
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.67 E-value=4.3e-16 Score=141.60 Aligned_cols=116 Identities=17% Similarity=0.156 Sum_probs=94.4
Q ss_pred ccCcc--cccccccccCCCeEEEEEEEcccCccc-cCCCCCC-ceE-----EEeeecccCCCCCCccCcEEEEEec-C-C
Q psy3954 37 YLQPR--KRLTANQIIQDLGTLRIRIQYTADHIL-QPHYYED-LCT-----QILNSPSVNPVTSPFFGEEFQFDIP-R-R 105 (268)
Q Consensus 37 ~~~p~--~~~~~~~~~~~~~~L~V~v~~~a~~L~-~~~~~~d-yv~-----~~~~T~~~~~t~nP~wne~f~f~v~-~-~ 105 (268)
..+|. ..++.-....+.+.|.|+|+ +|++|+ |..|.+| ||+ +.+||+++++++||+|||+|.|.+. . .
T Consensus 375 ~C~~~~~t~~~~C~~~~~~~~L~V~V~-~A~~L~~D~~g~sDPYV~v~l~~~~~kTkvik~tlNP~Wne~f~f~~~~~~~ 453 (540)
T 3nsj_A 375 ECQDSKVTNQDCCPRQRGLAHLVVSNF-RAEHLWGDYTTATDAYLKVFFGGQEFRTGVVWNNNNPRWTDKMDFENVLLST 453 (540)
T ss_dssp EESCTTTBCGGGCBSSTTEEEEEEEEE-EEESCCCSSCSCCCEEEEEEETTEEEECCCBCSCSSCBCCCCEEEEEEETTT
T ss_pred eCCCCCCcccccccccCcccEEEEEEE-EccCCCcccCCCcCeEEEEEECCEeeeeeeecCCCCCCCCeEEEEEEecCCC
Confidence 34444 55555556677899999999 999999 8888999 998 6799999999999999999999853 2 4
Q ss_pred CcEEEEEEEeCCCCCCCCceeEEEEEeccccccccCccceecCcccCCCcccceEEEEEEE
Q psy3954 106 FRHLAVYAYDRDRTSKTDRVLGKVTIQRSDLHRISNKEHWFPLTPVTQDSEVQGKIQIGVL 166 (268)
Q Consensus 106 ~~~l~~~v~d~d~~~~~d~~iG~~~i~l~~l~~~~~~~~w~~L~~~~~~~~~~G~i~v~l~ 166 (268)
.+.|+|+|||+| ..++|++||++.++|.. ...+.|++|. .|.|++++.
T Consensus 454 ~~~L~~~V~D~D-~~~~dD~LG~~~~~L~~----g~~~~~~~l~--------~G~l~~~~~ 501 (540)
T 3nsj_A 454 GGPLRVQVWDAD-YGWDDDLLGSCDRSPHS----GFHEVTCELN--------HGRVKFSYH 501 (540)
T ss_dssp CCCEEEEEEECC-SSSCCEEEEEEEECCCS----EEEEEEEECS--------SSEEEEEEE
T ss_pred CCEEEEEEEECC-CCCCCCEEEEEEEEeeC----CcEEEEEEcC--------CeEEEEEEE
Confidence 789999999999 78889999999999872 2356788763 377777643
No 76
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.66 E-value=2.6e-16 Score=117.64 Aligned_cols=85 Identities=21% Similarity=0.260 Sum_probs=68.8
Q ss_pred CCeEEEEEceecCCCCCCCCCCCEEEEEEEecCCcceeeeceec-cCCCCCccceEEEEEccCCCCceEEEEEEecCCC-
Q psy3954 169 PTSLMVNVNEASGLTQVNGQCDPTAMVTVHYTHNKSDVQKSKVK-KKSHSPVFNESFMFDRSLGDPIELVVSLHHDISG- 246 (268)
Q Consensus 169 ~~~L~v~v~~a~~L~~~~g~~dpyv~v~l~~~~~~~~~~kT~v~-~~t~nP~~ne~f~f~v~~~~~~~l~i~V~d~~~~- 246 (268)
.+.|.|+|++|++|+. .|.+||||++. . . ..+|+++ .++.||+|||.|.|.+...+ ..|.|+|||+| .
T Consensus 4 ~~~L~V~V~~A~~l~~-~g~~DPYv~v~-~-----~-~~kt~~~~~~t~nP~WnE~f~f~v~~~~-~~L~~~V~D~d-~~ 73 (131)
T 2cjt_A 4 MSLLCVGVKKAKFDGA-QEKFNTYVTLK-V-----Q-NVKSTTIAVRGSQPSWEQDFMFEINRLD-LGLTVEVWNKG-LI 73 (131)
T ss_dssp CEEEEEEEEEEECSSC-GGGCEEEEEEE-E-----T-TEEEECCCEESSSCEEEEEEEEEECCCS-SEEEEEEEECC-SS
T ss_pred ceEEEEEEEEeECCCC-CCCcCeEEEEE-e-----c-CEEEeEecCCCCCceECCEEEEEEeCCC-CeEEEEEEECC-CC
Confidence 3679999999999864 67799999999 3 2 2344444 47999999999999987422 24999999999 7
Q ss_pred CCeeeEEEEEeCCccCC
Q psy3954 247 LNVFLGEVHIPLNNKET 263 (268)
Q Consensus 247 ~~~~lG~~~l~l~~~~~ 263 (268)
+|++||++.|+|+++..
T Consensus 74 ~dd~iG~~~i~l~~l~~ 90 (131)
T 2cjt_A 74 WDTMVGTVWIPLRTIRQ 90 (131)
T ss_dssp CEEEEEEEEEEGGGSCB
T ss_pred CCCeEEEEEEEHHHhhh
Confidence 99999999999999854
No 77
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.66 E-value=4.4e-16 Score=121.06 Aligned_cols=83 Identities=20% Similarity=0.241 Sum_probs=71.9
Q ss_pred CCeEEEEEEEcccCccccCCCCCC-ceE---EEeeecccC-CCCCCccCcEEEEEecCCCcEEEEEEEeCCCCCCCCcee
Q psy3954 52 DLGTLRIRIQYTADHILQPHYYED-LCT---QILNSPSVN-PVTSPFFGEEFQFDIPRRFRHLAVYAYDRDRTSKTDRVL 126 (268)
Q Consensus 52 ~~~~L~V~v~~~a~~L~~~~~~~d-yv~---~~~~T~~~~-~t~nP~wne~f~f~v~~~~~~l~~~v~d~d~~~~~d~~i 126 (268)
..+.|.|+|+ +|++|+ ..+.+| ||+ +..+|++++ +++||+|||+|.|.+......|.|+|||+| +++|++|
T Consensus 12 ~~~~L~V~V~-~A~~l~-~~g~~DPYV~v~~~~~kt~~~~~~t~nP~WnE~f~f~v~~~~~~L~~~V~D~d--~~~dd~i 87 (167)
T 2cjs_A 12 ILSLLCVGVK-KAKFDG-AQEKFNTYVTLKVQNVESTTIAVRGSQPSWEQDFMFEINRLDLGLTVEVWNKG--LIWDTMV 87 (167)
T ss_dssp CCCEEEEEEE-EEECSS-CGGGCEEEEEEEETTEEEECCCEESSSCEEEEEEEEECCCTTSEEEEEEEECC--SSCCEEE
T ss_pred ceEEEEEEEE-EEECCC-CCCCCCeEEEEEecceEEEEecCCCCCCCCCCEEEEEeeCCCCEEEEEEEECC--CCCCceE
Confidence 3689999999 999886 567889 999 345677765 699999999999999877788999999999 5679999
Q ss_pred EEEEEecccccc
Q psy3954 127 GKVTIQRSDLHR 138 (268)
Q Consensus 127 G~~~i~l~~l~~ 138 (268)
|++.++|+++..
T Consensus 88 G~~~i~L~~l~~ 99 (167)
T 2cjs_A 88 GTVWIPLRTIRQ 99 (167)
T ss_dssp EEEEEEGGGSCB
T ss_pred EEEEEEHHHhcc
Confidence 999999999864
No 78
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.60 E-value=1.8e-15 Score=140.31 Aligned_cols=99 Identities=22% Similarity=0.351 Sum_probs=84.8
Q ss_pred CCeEEEEEceecCCCCC----CCCCCCEEEEEEEecCCcceeeeceeccCC-CCCccceEEEEEccCCCCceEEEEEEec
Q psy3954 169 PTSLMVNVNEASGLTQV----NGQCDPTAMVTVHYTHNKSDVQKSKVKKKS-HSPVFNESFMFDRSLGDPIELVVSLHHD 243 (268)
Q Consensus 169 ~~~L~v~v~~a~~L~~~----~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t-~nP~~ne~f~f~v~~~~~~~l~i~V~d~ 243 (268)
.+.|.|+|++|++|+.. .|.+||||+|.+...+....+++|++++++ +||+|||+|.|.+..+++..|.|+|||+
T Consensus 496 ~~~L~V~Vi~A~~L~~~d~~~~~~~DPYV~V~l~g~~~d~~~~kTkvi~~ng~NP~WnE~f~F~v~~~el~~L~~~V~D~ 575 (624)
T 1djx_A 496 PERLRVRIISGQQLPKVNKNKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFEFEVTVPDLALVRFMVEDY 575 (624)
T ss_dssp CEEEEEEEEEEESCCCCSSCSSSCCCEEEEEEEESSGGGCEEEECCCCTTCSSSCEEEEEEEEEESCGGGCEEEEEEEEC
T ss_pred ceEEEEEEEEcCCCCcccccccCCCCcEEEEEEecCCCCcceeecccccCCCCCCccCceEEEEEecCCCCEEEEEEEEc
Confidence 46789999999999743 567999999999733334567899999987 9999999999999877777799999999
Q ss_pred CCC-CCeeeEEEEEeCCccCCCCCC
Q psy3954 244 ISG-LNVFLGEVHIPLNNKETSSSW 267 (268)
Q Consensus 244 ~~~-~~~~lG~~~l~l~~~~~~~~~ 267 (268)
|.. ++++||++.|++.++..|..|
T Consensus 576 D~~~~dd~iG~~~ipl~~L~~G~r~ 600 (624)
T 1djx_A 576 DSSSKNDFIGQSTIPWNSLKQGYRH 600 (624)
T ss_dssp CSSSCCEEEEEEEEEGGGBCCEEEE
T ss_pred CCCCCCceeEEEEEEHHHcCCCcEE
Confidence 988 999999999999999876544
No 79
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.60 E-value=3.6e-15 Score=115.88 Aligned_cols=85 Identities=20% Similarity=0.259 Sum_probs=69.3
Q ss_pred CCeEEEEEceecCCCCCCCCCCCEEEEEEEecCCcceeeeceecc-CCCCCccceEEEEEccCCCCceEEEEEEecCCC-
Q psy3954 169 PTSLMVNVNEASGLTQVNGQCDPTAMVTVHYTHNKSDVQKSKVKK-KSHSPVFNESFMFDRSLGDPIELVVSLHHDISG- 246 (268)
Q Consensus 169 ~~~L~v~v~~a~~L~~~~g~~dpyv~v~l~~~~~~~~~~kT~v~~-~t~nP~~ne~f~f~v~~~~~~~l~i~V~d~~~~- 246 (268)
.+.|.|+|++|++|+ ..|.+||||++. . . ..+|++++ ++.||+|||.|.|.+...+ ..|.|+|||+| .
T Consensus 13 ~~~L~V~V~~A~~l~-~~g~~DPYV~v~-~-----~-~~kt~~~~~~t~nP~WnE~f~f~v~~~~-~~L~~~V~D~d-~~ 82 (167)
T 2cjs_A 13 LSLLCVGVKKAKFDG-AQEKFNTYVTLK-V-----Q-NVESTTIAVRGSQPSWEQDFMFEINRLD-LGLTVEVWNKG-LI 82 (167)
T ss_dssp CCEEEEEEEEEECSS-CGGGCEEEEEEE-E-----T-TEEEECCCEESSSCEEEEEEEEECCCTT-SEEEEEEEECC-SS
T ss_pred eEEEEEEEEEEECCC-CCCCCCeEEEEE-e-----c-ceEEEEecCCCCCCCCCCEEEEEeeCCC-CEEEEEEEECC-CC
Confidence 357899999999885 467799999999 3 1 24555554 6999999999999987422 24999999999 7
Q ss_pred CCeeeEEEEEeCCccCC
Q psy3954 247 LNVFLGEVHIPLNNKET 263 (268)
Q Consensus 247 ~~~~lG~~~l~l~~~~~ 263 (268)
+|++||++.|+|.++..
T Consensus 83 ~dd~iG~~~i~L~~l~~ 99 (167)
T 2cjs_A 83 WDTMVGTVWIPLRTIRQ 99 (167)
T ss_dssp CCEEEEEEEEEGGGSCB
T ss_pred CCceEEEEEEEHHHhcc
Confidence 99999999999999854
No 80
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.59 E-value=3.2e-15 Score=135.83 Aligned_cols=87 Identities=17% Similarity=0.145 Sum_probs=75.1
Q ss_pred CCeEEEEEceecCCC-CCCCCCCCEEEEEEEecCCcceeeeceeccCCCCCccceEEEEEcc-CCCCceEEEEEEecCCC
Q psy3954 169 PTSLMVNVNEASGLT-QVNGQCDPTAMVTVHYTHNKSDVQKSKVKKKSHSPVFNESFMFDRS-LGDPIELVVSLHHDISG 246 (268)
Q Consensus 169 ~~~L~v~v~~a~~L~-~~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~~ne~f~f~v~-~~~~~~l~i~V~d~~~~ 246 (268)
.+.|.|+|++|++|+ |..|.+||||++.+. ..+.+|+++++++||+|||.|.|.+. ......|.|+|||+|..
T Consensus 393 ~~~L~V~V~~A~~L~~D~~g~sDPYV~v~l~-----~~~~kTkvik~tlNP~Wne~f~f~~~~~~~~~~L~~~V~D~D~~ 467 (540)
T 3nsj_A 393 LAHLVVSNFRAEHLWGDYTTATDAYLKVFFG-----GQEFRTGVVWNNNNPRWTDKMDFENVLLSTGGPLRVQVWDADYG 467 (540)
T ss_dssp EEEEEEEEEEEESCCCSSCSCCCEEEEEEET-----TEEEECCCBCSCSSCBCCCCEEEEEEETTTCCCEEEEEEECCSS
T ss_pred ccEEEEEEEEccCCCcccCCCcCeEEEEEEC-----CEeeeeeeecCCCCCCCCeEEEEEEecCCCCCEEEEEEEECCCC
Confidence 467999999999997 567889999999997 35699999999999999999999854 23333499999999998
Q ss_pred -CCeeeEEEEEeCCc
Q psy3954 247 -LNVFLGEVHIPLNN 260 (268)
Q Consensus 247 -~~~~lG~~~l~l~~ 260 (268)
+|++||++.++|..
T Consensus 468 ~~dD~LG~~~~~L~~ 482 (540)
T 3nsj_A 468 WDDDLLGSCDRSPHS 482 (540)
T ss_dssp SCCEEEEEEEECCCS
T ss_pred CCCCEEEEEEEEeeC
Confidence 89999999999873
No 81
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.58 E-value=3.7e-15 Score=110.48 Aligned_cols=85 Identities=21% Similarity=0.262 Sum_probs=74.8
Q ss_pred eEEEEEceecCCCCCCCCCCCEEEEEEEecCCcceeeeceecc-CCCCCccceEEEEEccCCCCce--EEEEEEecCCC-
Q psy3954 171 SLMVNVNEASGLTQVNGQCDPTAMVTVHYTHNKSDVQKSKVKK-KSHSPVFNESFMFDRSLGDPIE--LVVSLHHDISG- 246 (268)
Q Consensus 171 ~L~v~v~~a~~L~~~~g~~dpyv~v~l~~~~~~~~~~kT~v~~-~t~nP~~ne~f~f~v~~~~~~~--l~i~V~d~~~~- 246 (268)
-|+|.|.+|.+|+ |.+|||+++.+. ..+++|++++ ++.||+|||.|+|++..+.... |.|.|+|++++
T Consensus 22 sL~V~l~~a~~Lp---g~~Dp~akv~FR-----g~k~kTkvi~~~~~npvfnE~F~wpl~~~ld~~e~L~v~V~d~~~v~ 93 (144)
T 3l9b_A 22 ALIVHLKTVSELR---GRADRIAKVTFR-----GQSFYSRVLENCEDVADFDETFRWPVASSIDRNEVLEIQIFNYSKVF 93 (144)
T ss_dssp EEEEEEEEEESCC---SCEEEEEEEEET-----TEEEECCCEEEECSCEEEEEEEEEEESSCCCTTCEEEEEEEEECTTS
T ss_pred EEEEEEEEecCCC---CCCCCeEEEEEe-----ccceeeEEeccCCCCceEcceEEecCCCCCCCCCEEEEEEEECcccc
Confidence 4789999999998 578999999995 7889999998 6999999999999998744433 99999999999
Q ss_pred CCeeeEEEEEeCCccCC
Q psy3954 247 LNVFLGEVHIPLNNKET 263 (268)
Q Consensus 247 ~~~~lG~~~l~l~~~~~ 263 (268)
++++||++.++|.++..
T Consensus 94 ~nrlIG~~~i~Lq~lv~ 110 (144)
T 3l9b_A 94 SNKLIGTFRMVLQKVVE 110 (144)
T ss_dssp CCEEEEEEEEESHHHHH
T ss_pred CCCEEEEEEEEhHHhcc
Confidence 99999999999977643
No 82
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=99.57 E-value=1.7e-16 Score=143.43 Aligned_cols=115 Identities=20% Similarity=0.298 Sum_probs=20.6
Q ss_pred cCCCeEEEEEEEcccCccccCCCCCC-ceE------EEeeecccCCC---CCCccCcEEEEEecCCCcEEEEEEEeC-CC
Q psy3954 50 IQDLGTLRIRIQYTADHILQPHYYED-LCT------QILNSPSVNPV---TSPFFGEEFQFDIPRRFRHLAVYAYDR-DR 118 (268)
Q Consensus 50 ~~~~~~L~V~v~~~a~~L~~~~~~~d-yv~------~~~~T~~~~~t---~nP~wne~f~f~v~~~~~~l~~~v~d~-d~ 118 (268)
.+..+.|.|+|+ +|++|+.. .| ||+ ...||+++++| +||+|||+|.|.+.+....|.|+|||. |.
T Consensus 7 ~r~~~~L~V~Vi-eAk~L~~~---ddpYv~v~l~~~~~~kT~v~~kt~~glnP~WnE~F~f~~~~~~~~L~v~V~d~~d~ 82 (483)
T 3bxj_A 7 RRVDNVLKLWII-EARELPPK---KRYYCELCLDDMLYARTTSKPRSASGDTVFWGEHFEFNNLPAVRALRLHLYRDSDK 82 (483)
T ss_dssp EEEEECC-------------------------------------------------CCEECC------------------
T ss_pred ceeccEEEEEEE-EcCCcCCC---CCCeEEEEECCeEEeeeeEEeCCCCCCCCccccEEEEecCCCccEEEEEEEecCCc
Confidence 344678999999 99999822 27 888 36799999999 999999999998655468999999994 41
Q ss_pred --CCCCCceeEEEEEeccccccccCccceecCcccCC----------------------CcccceEEEEEEEEc
Q psy3954 119 --TSKTDRVLGKVTIQRSDLHRISNKEHWFPLTPVTQ----------------------DSEVQGKIQIGVLST 168 (268)
Q Consensus 119 --~~~~d~~iG~~~i~l~~l~~~~~~~~w~~L~~~~~----------------------~~~~~G~i~v~l~~~ 168 (268)
..++|++||++.|+++++..+...+.|++|..... .....|.|++++.|.
T Consensus 83 ~~~~~~d~~lG~v~i~l~~l~~~~~~~~W~~L~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~G~lrL~v~~~ 156 (483)
T 3bxj_A 83 KRKKDKAGYVGLVTVPVATLAGRHFTEQWYPVTLPTGSGGSGGMGSGGGGGSGGGSGGKGKGGCPAVRLKARYQ 156 (483)
T ss_dssp ------------------------CCEECC--------------------------------------CEEEEE
T ss_pred cccCCCCceEEEEEEEHHHhcCCCCCCeEEECCCCCCccccccccccccccccccccccCCCCCceEEEEEEee
Confidence 25789999999999999987778899999954332 112458888888875
No 83
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.55 E-value=1.2e-14 Score=132.52 Aligned_cols=90 Identities=24% Similarity=0.270 Sum_probs=79.9
Q ss_pred CCeEEEEEceecCCC--CCCCCCCCEEEEEEEecCCcceeeeceeccCCCCCccceEEEEEccCCCCceEEEEEEecCCC
Q psy3954 169 PTSLMVNVNEASGLT--QVNGQCDPTAMVTVHYTHNKSDVQKSKVKKKSHSPVFNESFMFDRSLGDPIELVVSLHHDISG 246 (268)
Q Consensus 169 ~~~L~v~v~~a~~L~--~~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~~ne~f~f~v~~~~~~~l~i~V~d~~~~ 246 (268)
.+.|.|+|++|++|+ +..|.+||||++.+. ..+++|+++++++||.|||+|.|.+.......|.|+|||+|.+
T Consensus 386 ~~~l~v~v~~a~~L~~~d~~~~sdpyv~v~~~-----~~~~~T~~~~~t~nP~w~e~f~f~~~~~~~~~l~~~v~d~d~~ 460 (510)
T 3jzy_A 386 IGRLMVHVIEATELKACKPNGKSNPYCEISMG-----SQSYTTRTIQDTLNPKWNFNCQFFIKDLYQDVLCLTLFDRDQF 460 (510)
T ss_dssp CEEEEEEEEEEESCCCCSTTSCCCEEEEEEET-----TEEEECCCCSSCSSCEEEEEEEEEESCTTTCEEEEEEEECCSS
T ss_pred CceEEEEeceeecCCCCCCCCCCCeEEEEEEC-----CeeccCCccCCCCCCccCceEEEEecCCCCCEEEEEEEeCCCC
Confidence 678999999999996 567889999999996 5678999999999999999999998765555599999999998
Q ss_pred -CCeeeEEEEEeCCccCC
Q psy3954 247 -LNVFLGEVHIPLNNKET 263 (268)
Q Consensus 247 -~~~~lG~~~l~l~~~~~ 263 (268)
++++||++.++++++..
T Consensus 461 ~~~d~lG~~~~~l~~l~~ 478 (510)
T 3jzy_A 461 SPDDFLGRTEIPVAKIRT 478 (510)
T ss_dssp SSCCEEEEEEEEHHHHHH
T ss_pred CCCCceEEEEEEHHHhcc
Confidence 89999999999988754
No 84
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.55 E-value=7.4e-15 Score=137.51 Aligned_cols=98 Identities=19% Similarity=0.191 Sum_probs=87.5
Q ss_pred CCCeEEEEEEEcccCcccc-----CCCCCC-ceE--------EEeeecccCCCCCCccCcEEEEEecCC-CcEEEEEEEe
Q psy3954 51 QDLGTLRIRIQYTADHILQ-----PHYYED-LCT--------QILNSPSVNPVTSPFFGEEFQFDIPRR-FRHLAVYAYD 115 (268)
Q Consensus 51 ~~~~~L~V~v~~~a~~L~~-----~~~~~d-yv~--------~~~~T~~~~~t~nP~wne~f~f~v~~~-~~~l~~~v~d 115 (268)
...+.|.|+|+ +|++|+. ..|.+| ||+ .++||+++++++||+|||+|.|.+... ...|.|+|||
T Consensus 15 ~~~g~L~V~Vi-~A~nL~~~~~~D~~g~sDPYV~V~l~~~~~~k~kTkvik~tlNPvWNEtF~F~v~~~~~~~L~~~V~D 93 (749)
T 1cjy_A 15 QYSHKFTVVVL-RATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMD 93 (749)
T ss_dssp CCCEEEEEEEE-EEECCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCBCEEEEEE
T ss_pred CCccEEEEEEE-EEECCCCccccCCCCCcCeEEEEEEecCCCCeEecceEcCCCCCeeeeEEEEEecCCCCCEEEEEEEE
Confidence 34689999999 9999984 467899 999 478999999999999999999999874 7899999999
Q ss_pred CCCCCCCCceeEEEEEeccccccccCccceecCccc
Q psy3954 116 RDRTSKTDRVLGKVTIQRSDLHRISNKEHWFPLTPV 151 (268)
Q Consensus 116 ~d~~~~~d~~iG~~~i~l~~l~~~~~~~~w~~L~~~ 151 (268)
+| .++ |++||++.+++.++..+...+.|++|.+.
T Consensus 94 ~D-~~~-ddfIG~v~I~L~~L~~g~~~~~w~~L~~~ 127 (749)
T 1cjy_A 94 AN-YVM-DETLGTATFTVSSMKVGEKKEVPFIFNQV 127 (749)
T ss_dssp CC-SSS-CEEEEEECCBSTTSCTTCCCCEEEEETTT
T ss_pred CC-CCC-CceeEEEEEEHHHcCCCCceEEEEecCCC
Confidence 99 788 99999999999999877778899999764
No 85
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.53 E-value=3e-14 Score=133.97 Aligned_cols=109 Identities=27% Similarity=0.328 Sum_probs=96.4
Q ss_pred cccceEEEEEEEEcCCeEEEEEceecCCC--CCCCCCCCEEEEEEEecCCcceeeeceeccCCCCCccceEEEEEccCCC
Q psy3954 155 SEVQGKIQIGVLSTPTSLMVNVNEASGLT--QVNGQCDPTAMVTVHYTHNKSDVQKSKVKKKSHSPVFNESFMFDRSLGD 232 (268)
Q Consensus 155 ~~~~G~i~v~l~~~~~~L~v~v~~a~~L~--~~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~~ne~f~f~v~~~~ 232 (268)
....|.|.+++.+..+.|.|.|++|++|+ +..|.+||||++.+..++....+++|+++++++||.|||.|.|.+...+
T Consensus 157 ~~~~g~i~~~~~~~~~~L~V~v~~a~~L~~~d~~g~sDPyvkv~l~p~~~~~~k~kT~v~~~tlnP~wne~f~f~~~~~~ 236 (674)
T 3pfq_A 157 TERRGRIYIQAHIDREVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKSSLNPEWNETFRFQLKESD 236 (674)
T ss_dssp SCCSCEEEEEEEECSSEEEEEEEEEESCCCCSTTSSCCEEEEEEEESCSSCCSCEECCCCSSCSSCEEEEEEEEECCSTT
T ss_pred ccccccccccceeccceeeeeeecccccCCCCcccccCcccccccccCccccccccccccccccCCCccceeeeecccCC
Confidence 34579999999999999999999999996 6678899999999986655567889999999999999999999987766
Q ss_pred Cce-EEEEEEecCCC-CCeeeEEEEEeCCccCC
Q psy3954 233 PIE-LVVSLHHDISG-LNVFLGEVHIPLNNKET 263 (268)
Q Consensus 233 ~~~-l~i~V~d~~~~-~~~~lG~~~l~l~~~~~ 263 (268)
... |.|+|||+|.. ++++||++.++++++..
T Consensus 237 ~~~~L~v~v~d~d~~~~dd~iG~~~i~l~~l~~ 269 (674)
T 3pfq_A 237 KDRRLSVEIWDWDLTSRNDFMGSLSFGISELQK 269 (674)
T ss_dssp TTCEEEEEEEECCSSSCCEECCBCCCBTTHHHH
T ss_pred ccceeeeEEeecccccccccccccccchhhhcc
Confidence 655 99999999999 99999999999987744
No 86
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.50 E-value=4.5e-14 Score=132.26 Aligned_cols=95 Identities=17% Similarity=0.217 Sum_probs=81.4
Q ss_pred CCeEEEEEceecCCCC-----CCCCCCCEEEEEEEecCCcceeeeceeccCCCCCccceEEEEEccCCCCceEEEEEEec
Q psy3954 169 PTSLMVNVNEASGLTQ-----VNGQCDPTAMVTVHYTHNKSDVQKSKVKKKSHSPVFNESFMFDRSLGDPIELVVSLHHD 243 (268)
Q Consensus 169 ~~~L~v~v~~a~~L~~-----~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~~ne~f~f~v~~~~~~~l~i~V~d~ 243 (268)
.+.|.|.|++|++|+. ..|.+||||++++.. ....+++|+++++++||+|||+|.|.+.......|.|+|||+
T Consensus 17 ~g~L~V~Vi~A~nL~~~~~~D~~g~sDPYV~V~l~~--~~~~k~kTkvik~tlNPvWNEtF~F~v~~~~~~~L~~~V~D~ 94 (749)
T 1cjy_A 17 SHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFIST--TPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDA 94 (749)
T ss_dssp CEEEEEEEEEEECCCSCHHHHHHCCCCEEEEEECTT--STTCCEECCCCTTCSSCEEEEEEEEEECTTSCCBCEEEEEEC
T ss_pred ccEEEEEEEEEECCCCccccCCCCCcCeEEEEEEec--CCCCeEecceEcCCCCCeeeeEEEEEecCCCCCEEEEEEEEC
Confidence 4678999999999976 367899999999872 223678999999999999999999998765555599999999
Q ss_pred CCCCCeeeEEEEEeCCccCCCC
Q psy3954 244 ISGLNVFLGEVHIPLNNKETSS 265 (268)
Q Consensus 244 ~~~~~~~lG~~~l~l~~~~~~~ 265 (268)
|.+++++||++.+++.++..+.
T Consensus 95 D~~~ddfIG~v~I~L~~L~~g~ 116 (749)
T 1cjy_A 95 NYVMDETLGTATFTVSSMKVGE 116 (749)
T ss_dssp CSSSCEEEEEECCBSTTSCTTC
T ss_pred CCCCCceeEEEEEEHHHcCCCC
Confidence 8877999999999999987653
No 87
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=99.43 E-value=3.6e-13 Score=128.04 Aligned_cols=138 Identities=12% Similarity=0.213 Sum_probs=102.4
Q ss_pred eeeccccccceEEEeeeeeeccCccccccccccc----------CCCeEEEEEEEcccCccccCCCCCC-ceE-------
Q psy3954 17 KLMVNHATYKLMVKHTAYKYYLQPRKRLTANQII----------QDLGTLRIRIQYTADHILQPHYYED-LCT------- 78 (268)
Q Consensus 17 ~~~~~~~~~~l~~~~~~~~y~~~p~~~~~~~~~~----------~~~~~L~V~v~~~a~~L~~~~~~~d-yv~------- 78 (268)
-.++|++.|..+.- ..|.++|.........+ .....|.|+|+ +|++|++ ..+| ||+
T Consensus 681 ~m~lN~g~F~~nG~---cGYVLKP~~lr~~~~~f~p~~~~~~~~~~~~~L~V~Vi-saq~L~~--~~~DPYV~V~l~g~p 754 (885)
T 3ohm_B 681 AMQLNAGVFEYNGR---SGYLLKPEFMRRPDKSFDPFTEVIVDGIVANALRVKVI-SGQFLSD--RKVGIYVEVDMFGLP 754 (885)
T ss_dssp HHHHHHHHHTTGGG---CSEEECCGGGTCTTCCCCTTCSSCCTTCCCEEEEEEEE-EEESCCS--SCCCEEEEEEEESST
T ss_pred ccchhhhhhccCCc---eeeeecCHHHcCCCcCcCCCcCcccCcccceEEEEEEE-EeccCcc--cCCCcEEEEEEeCCC
Confidence 45678888876543 28999998776543221 12347999999 9999984 2578 998
Q ss_pred ----EEeeecccCC-CCCCccCc-EEEEE-ecCC-CcEEEEEEEeCCCCCCCCceeEEEEEeccccccccCccceecCcc
Q psy3954 79 ----QILNSPSVNP-VTSPFFGE-EFQFD-IPRR-FRHLAVYAYDRDRTSKTDRVLGKVTIQRSDLHRISNKEHWFPLTP 150 (268)
Q Consensus 79 ----~~~~T~~~~~-t~nP~wne-~f~f~-v~~~-~~~l~~~v~d~d~~~~~d~~iG~~~i~l~~l~~~~~~~~w~~L~~ 150 (268)
.++||+++++ ++||+||| +|.|. +... ...|+|+|||+| |++||++.+||..|..+ -++++|..
T Consensus 755 ~D~~~k~kTkvi~~NglNPvWnEe~F~F~~V~~pela~Lrf~V~D~d-----ddfiG~~~lpL~~L~~G---yR~vpL~~ 826 (885)
T 3ohm_B 755 VDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLPTLASLRIAAFEEG-----GKFVGHRILPVSAIRSG---YHYVCLRN 826 (885)
T ss_dssp TTCBCCCCCCCCSSCSSSCBCCCCCEEEEEESCGGGCEEEEEEEETT-----TEEEEEEEEETTTCCCE---EEEEEEEC
T ss_pred cccccceeeEEeeCCCcCCeeccceeEEeeEEcCCcCEEEEEEEcCC-----ccEEeeEEEEHHHcCCC---ceEEEecC
Confidence 1468999986 59999999 69998 6544 568999999987 78999999999998743 34577765
Q ss_pred cCCCcccceEEEEEEEEc
Q psy3954 151 VTQDSEVQGKIQIGVLST 168 (268)
Q Consensus 151 ~~~~~~~~G~i~v~l~~~ 168 (268)
.....-..|.|.+.+.+.
T Consensus 827 ~~g~~l~~atLfv~i~~~ 844 (885)
T 3ohm_B 827 EANQPLCLPALLIYTEAS 844 (885)
T ss_dssp TTSCEEEEEEEEEEEEEE
T ss_pred CCCCccCceEEEEEEEEE
Confidence 544433467787777654
No 88
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=99.42 E-value=6e-13 Score=125.88 Aligned_cols=137 Identities=12% Similarity=0.223 Sum_probs=99.8
Q ss_pred eeeccccccceEEEeeeeeeccCccccccccccc----------CCCeEEEEEEEcccCccccCCCCCC-ceE-------
Q psy3954 17 KLMVNHATYKLMVKHTAYKYYLQPRKRLTANQII----------QDLGTLRIRIQYTADHILQPHYYED-LCT------- 78 (268)
Q Consensus 17 ~~~~~~~~~~l~~~~~~~~y~~~p~~~~~~~~~~----------~~~~~L~V~v~~~a~~L~~~~~~~d-yv~------- 78 (268)
-.++|++.|..+.- ..|.++|.........+ ...+.|.|+|+ +|++|++. .+| ||+
T Consensus 606 ~m~LN~g~F~~nG~---cGYVLKP~~lr~~~~~f~p~~~~~~~~~~~~~L~V~Vi-saq~L~~~--~~DPYV~V~l~g~p 679 (816)
T 3qr0_A 606 AMCVNLGVFEYNGC---SGYLLKPEFMRKLDKRFDPFTESTVDGVVAGTIEIKII-SAQFLSDK--QISSYVEVEMYGLP 679 (816)
T ss_dssp HHHHHHHHTTTTTT---CSEEECCHHHHCTTCCCCTTCCSCCTTSCCEEEEEEEE-EEECCCSS--CCCEEEEEEEESSG
T ss_pred hhhhhhhhhccCCc---eeeeecChHhcCCCcccCCCCCCCcCCccceEEEEEEE-EcccCCCC--CCCCeEEEEEeCCC
Confidence 45688888875443 38999998665432211 12368999999 99999842 578 998
Q ss_pred -----EEeeecccCC-CCCCccCcE-EEEE-ecCC-CcEEEEEEEeCCCCCCCCceeEEEEEeccccccccCccceecCc
Q psy3954 79 -----QILNSPSVNP-VTSPFFGEE-FQFD-IPRR-FRHLAVYAYDRDRTSKTDRVLGKVTIQRSDLHRISNKEHWFPLT 149 (268)
Q Consensus 79 -----~~~~T~~~~~-t~nP~wne~-f~f~-v~~~-~~~l~~~v~d~d~~~~~d~~iG~~~i~l~~l~~~~~~~~w~~L~ 149 (268)
.++||+++++ ++||+|||+ |.|. +... -..|+|+|||++ |++||++.+||..|..+ -++++|.
T Consensus 680 ~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~pela~Lrf~V~D~d-----ddfiG~~~ipL~~L~~G---yR~vpL~ 751 (816)
T 3qr0_A 680 TDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLPDLAVVRIIVSEEN-----GKFIGHRVMPLDGIKPG---YRHVPLR 751 (816)
T ss_dssp GGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESCGGGCEEEEEEEETT-----SCEEEEEEEESTTCCCE---EEEEEEE
T ss_pred cccccceeeeEEecCCCCCCeEcCceeEEccccCCCccEEEEEEEecC-----CCeeeEEEEEHHHcCCc---ceEEEEe
Confidence 2568999986 599999998 9998 7655 478999999986 67999999999998753 3467776
Q ss_pred ccCCCcccceEEEEEEEE
Q psy3954 150 PVTQDSEVQGKIQIGVLS 167 (268)
Q Consensus 150 ~~~~~~~~~G~i~v~l~~ 167 (268)
......-..+.|.+.+.+
T Consensus 752 ~~~g~~~~~atLfv~i~~ 769 (816)
T 3qr0_A 752 NESNRPLGLASVFAHIVA 769 (816)
T ss_dssp CTTSCEEEEEEEEEEEEE
T ss_pred CCCCCCCCceEEEEEEEE
Confidence 554333334666666544
No 89
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=99.40 E-value=7.8e-13 Score=125.52 Aligned_cols=137 Identities=16% Similarity=0.165 Sum_probs=101.1
Q ss_pred eeeccccccceEEEeeeeeeccCcccccccccc----------cCCCeEEEEEEEcccCccccCCCCCC-ceE-------
Q psy3954 17 KLMVNHATYKLMVKHTAYKYYLQPRKRLTANQI----------IQDLGTLRIRIQYTADHILQPHYYED-LCT------- 78 (268)
Q Consensus 17 ~~~~~~~~~~l~~~~~~~~y~~~p~~~~~~~~~----------~~~~~~L~V~v~~~a~~L~~~~~~~d-yv~------- 78 (268)
..++|++.|..+.-+ .|.++|......... ....+.|.|+|+ +|++|++ +.+| ||+
T Consensus 634 ~m~ln~g~F~~nG~c---GYVlKP~~lr~~~~~f~p~~~~~~~~~~~~~L~V~Vi-sa~~L~~--~~~DPYV~V~l~g~p 707 (799)
T 2zkm_X 634 PMQQNMAVFEFNGQS---GYLLKHEFMRRPDKQFNPFSVDRIDVVVATTLSITVI-SGQFLSE--RSVRTYVEVELFGLP 707 (799)
T ss_dssp HHHHHHHHTTTGGGC---SEEECCGGGTCTTSCCCTTSCCTTTTTTCEEEEEEEE-EEESCCS--SCCCEEEEEEEECCT
T ss_pred HHHHHHhhhhccCCC---CceECCHHHhCCCccCCCcccccccceeeeeEEEEEE-eccccCc--cCCCcEEEEEEEecC
Confidence 457888988754432 899999976543221 123578999999 9999984 4688 999
Q ss_pred ----EEeeec-ccCC-CCCCccCc-EEEE-EecCC-CcEEEEEEEeCCCCCCCCceeEEEEEeccccccccCccceecCc
Q psy3954 79 ----QILNSP-SVNP-VTSPFFGE-EFQF-DIPRR-FRHLAVYAYDRDRTSKTDRVLGKVTIQRSDLHRISNKEHWFPLT 149 (268)
Q Consensus 79 ----~~~~T~-~~~~-t~nP~wne-~f~f-~v~~~-~~~l~~~v~d~d~~~~~d~~iG~~~i~l~~l~~~~~~~~w~~L~ 149 (268)
.++||+ ++++ ++||+||| +|.| .+... -..|+|.|||+| +++||++.+|+..+..+ -+|++|.
T Consensus 708 ~d~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~el~~Lr~~V~D~d-----~d~iG~~~ipl~~L~~G---~r~v~L~ 779 (799)
T 2zkm_X 708 GDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPELASLRVAVMEEG-----NKFLGHRIIPINALNSG---YHHLCLH 779 (799)
T ss_dssp TSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSGGGCEEEEEEEETT-----TEEEEEEEEEGGGBCCE---EEEEEEE
T ss_pred CCcccceeecccccCCCCCCeeecceEEEEEEccCCccEEEEEEEEeC-----CCccceEeeehhhcCCC---cEEEecc
Confidence 146899 7765 69999999 6999 77655 468999999987 68999999999999743 3577776
Q ss_pred ccCCCcccceEEEEEEEE
Q psy3954 150 PVTQDSEVQGKIQIGVLS 167 (268)
Q Consensus 150 ~~~~~~~~~G~i~v~l~~ 167 (268)
......-..+.|.+.+.+
T Consensus 780 ~~~g~~~~~~~Lfv~i~~ 797 (799)
T 2zkm_X 780 SESNMPLTMPALFIFLEM 797 (799)
T ss_dssp CTTCCEEEEEEEEEEEEE
T ss_pred CCCCCCCCceEEEEEEEE
Confidence 544332335777776654
No 90
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.35 E-value=8.3e-13 Score=124.17 Aligned_cols=95 Identities=20% Similarity=0.430 Sum_probs=83.4
Q ss_pred CeEEEEEEEcccCccc--cCCCCCC-ceE----------EEeeecccCCCCCCccCcEEEEEecCC--CcEEEEEEEeCC
Q psy3954 53 LGTLRIRIQYTADHIL--QPHYYED-LCT----------QILNSPSVNPVTSPFFGEEFQFDIPRR--FRHLAVYAYDRD 117 (268)
Q Consensus 53 ~~~L~V~v~~~a~~L~--~~~~~~d-yv~----------~~~~T~~~~~t~nP~wne~f~f~v~~~--~~~l~~~v~d~d 117 (268)
.+.|.|+|+ +|++|+ +.+|.+| ||+ .+.+|+++++|+||.|||+|.|.+... ...|.|+|||+|
T Consensus 171 ~~~L~V~v~-~a~~L~~~d~~g~sDPyvkv~l~p~~~~~~k~kT~v~~~tlnP~wne~f~f~~~~~~~~~~L~v~v~d~d 249 (674)
T 3pfq_A 171 REVLIVVVR-DAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKSSLNPEWNETFRFQLKESDKDRRLSVEIWDWD 249 (674)
T ss_dssp SSEEEEEEE-EEESCCCCSTTSSCCEEEEEEEESCSSCCSCEECCCCSSCSSCEEEEEEEEECCSTTTTCEEEEEEEECC
T ss_pred cceeeeeee-cccccCCCCcccccCcccccccccCccccccccccccccccCCCccceeeeecccCCccceeeeEEeecc
Confidence 467999999 999998 8889999 998 367999999999999999999998765 567999999999
Q ss_pred CCCCCCceeEEEEEeccccccccCccceecCcc
Q psy3954 118 RTSKTDRVLGKVTIQRSDLHRISNKEHWFPLTP 150 (268)
Q Consensus 118 ~~~~~d~~iG~~~i~l~~l~~~~~~~~w~~L~~ 150 (268)
..++|++||.+.+++.++... ..+.|+.|..
T Consensus 250 -~~~~dd~iG~~~i~l~~l~~~-~~~~w~~Lls 280 (674)
T 3pfq_A 250 -LTSRNDFMGSLSFGISELQKA-GVDGWFKLLS 280 (674)
T ss_dssp -SSSCCEECCBCCCBTTHHHHC-CEEEEEECBC
T ss_pred -cccccccccccccchhhhccC-Ccccceeecc
Confidence 889999999999999998754 3588988754
No 91
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=99.33 E-value=2.9e-12 Score=121.23 Aligned_cols=92 Identities=17% Similarity=0.267 Sum_probs=76.6
Q ss_pred CeEEEEEceecCCCCCCCCCCCEEEEEEEecCCcc--eeeeceeccC-CCCCccceE-EEEE-ccCCCCceEEEEEEecC
Q psy3954 170 TSLMVNVNEASGLTQVNGQCDPTAMVTVHYTHNKS--DVQKSKVKKK-SHSPVFNES-FMFD-RSLGDPIELVVSLHHDI 244 (268)
Q Consensus 170 ~~L~v~v~~a~~L~~~~g~~dpyv~v~l~~~~~~~--~~~kT~v~~~-t~nP~~ne~-f~f~-v~~~~~~~l~i~V~d~~ 244 (268)
+.|.|+|++|++|++. .+||||+|.+...+... .+++|+++++ ++||+|||. |.|. +..+++..|.|+|||++
T Consensus 650 ~~L~V~Visaq~L~~~--~~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~pela~Lrf~V~D~d 727 (816)
T 3qr0_A 650 GTIEIKIISAQFLSDK--QISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLPDLAVVRIIVSEEN 727 (816)
T ss_dssp EEEEEEEEEEECCCSS--CCCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESCGGGCEEEEEEEETT
T ss_pred eEEEEEEEEcccCCCC--CCCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCceeEEccccCCCccEEEEEEEecC
Confidence 5689999999999853 58999999998322222 5789999885 699999998 9998 87777777999999983
Q ss_pred CCCCeeeEEEEEeCCccCCCCC
Q psy3954 245 SGLNVFLGEVHIPLNNKETSSS 266 (268)
Q Consensus 245 ~~~~~~lG~~~l~l~~~~~~~~ 266 (268)
+++||++.+||+++..|-.
T Consensus 728 ---ddfiG~~~ipL~~L~~GyR 746 (816)
T 3qr0_A 728 ---GKFIGHRVMPLDGIKPGYR 746 (816)
T ss_dssp ---SCEEEEEEEESTTCCCEEE
T ss_pred ---CCeeeEEEEEHHHcCCcce
Confidence 8999999999999987643
No 92
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=99.32 E-value=2.9e-12 Score=121.60 Aligned_cols=93 Identities=23% Similarity=0.297 Sum_probs=76.6
Q ss_pred CCeEEEEEceecCCCCCCCCCCCEEEEEEEecCCc-ceeeece-ecc-CCCCCccce-EEEE-EccCCCCceEEEEEEec
Q psy3954 169 PTSLMVNVNEASGLTQVNGQCDPTAMVTVHYTHNK-SDVQKSK-VKK-KSHSPVFNE-SFMF-DRSLGDPIELVVSLHHD 243 (268)
Q Consensus 169 ~~~L~v~v~~a~~L~~~~g~~dpyv~v~l~~~~~~-~~~~kT~-v~~-~t~nP~~ne-~f~f-~v~~~~~~~l~i~V~d~ 243 (268)
.+.|.|.|++|++|++ +.+||||+|.+...+.. ..+++|+ +++ +++||+||| +|.| .+..+++..|.|.|||+
T Consensus 677 ~~~L~V~Visa~~L~~--~~~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~el~~Lr~~V~D~ 754 (799)
T 2zkm_X 677 ATTLSITVISGQFLSE--RSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPELASLRVAVMEE 754 (799)
T ss_dssp CEEEEEEEEEEESCCS--SCCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSGGGCEEEEEEEET
T ss_pred eeeEEEEEEeccccCc--cCCCcEEEEEEEecCCCcccceeecccccCCCCCCeeecceEEEEEEccCCccEEEEEEEEe
Confidence 3468999999999985 46899999999732322 2367899 776 469999999 7999 88877777899999998
Q ss_pred CCCCCeeeEEEEEeCCccCCCCC
Q psy3954 244 ISGLNVFLGEVHIPLNNKETSSS 266 (268)
Q Consensus 244 ~~~~~~~lG~~~l~l~~~~~~~~ 266 (268)
+ +++||++.||++++..|..
T Consensus 755 d---~d~iG~~~ipl~~L~~G~r 774 (799)
T 2zkm_X 755 G---NKFLGHRIIPINALNSGYH 774 (799)
T ss_dssp T---TEEEEEEEEEGGGBCCEEE
T ss_pred C---CCccceEeeehhhcCCCcE
Confidence 5 8999999999999987644
No 93
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=99.30 E-value=5e-12 Score=120.30 Aligned_cols=90 Identities=18% Similarity=0.221 Sum_probs=75.0
Q ss_pred eEEEEEceecCCCCCCCCCCCEEEEEEEecCCc-ceeeeceeccC-CCCCccce-EEEEE-ccCCCCceEEEEEEecCCC
Q psy3954 171 SLMVNVNEASGLTQVNGQCDPTAMVTVHYTHNK-SDVQKSKVKKK-SHSPVFNE-SFMFD-RSLGDPIELVVSLHHDISG 246 (268)
Q Consensus 171 ~L~v~v~~a~~L~~~~g~~dpyv~v~l~~~~~~-~~~~kT~v~~~-t~nP~~ne-~f~f~-v~~~~~~~l~i~V~d~~~~ 246 (268)
.|.|+|++|++|++. .+||||+|.+...+.. ..+++|+++++ ++||+||| +|.|. +..+++..|.|+|||++
T Consensus 726 ~L~V~Visaq~L~~~--~~DPYV~V~l~g~p~D~~~k~kTkvi~~NglNPvWnEe~F~F~~V~~pela~Lrf~V~D~d-- 801 (885)
T 3ohm_B 726 ALRVKVISGQFLSDR--KVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLPTLASLRIAAFEEG-- 801 (885)
T ss_dssp EEEEEEEEEESCCSS--CCCEEEEEEEESSTTTCBCCCCCCCCSSCSSSCBCCCCCEEEEEESCGGGCEEEEEEEETT--
T ss_pred EEEEEEEEeccCccc--CCCcEEEEEEeCCCcccccceeeEEeeCCCcCCeeccceeEEeeEEcCCcCEEEEEEEcCC--
Confidence 689999999999853 5899999999732222 23579999876 59999999 69998 77777777999999985
Q ss_pred CCeeeEEEEEeCCccCCCC
Q psy3954 247 LNVFLGEVHIPLNNKETSS 265 (268)
Q Consensus 247 ~~~~lG~~~l~l~~~~~~~ 265 (268)
+++||++.|||+++..|-
T Consensus 802 -ddfiG~~~lpL~~L~~Gy 819 (885)
T 3ohm_B 802 -GKFVGHRILPVSAIRSGY 819 (885)
T ss_dssp -TEEEEEEEEETTTCCCEE
T ss_pred -ccEEeeEEEEHHHcCCCc
Confidence 899999999999998764
No 94
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=99.21 E-value=1e-12 Score=118.69 Aligned_cols=88 Identities=17% Similarity=0.176 Sum_probs=8.4
Q ss_pred CCeEEEEEceecCCCCCCCCCCCEEEEEEEecCCcceeeeceeccCC---CCCccceEEEEEccCCCCceEEEEEEec-C
Q psy3954 169 PTSLMVNVNEASGLTQVNGQCDPTAMVTVHYTHNKSDVQKSKVKKKS---HSPVFNESFMFDRSLGDPIELVVSLHHD-I 244 (268)
Q Consensus 169 ~~~L~v~v~~a~~L~~~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t---~nP~~ne~f~f~v~~~~~~~l~i~V~d~-~ 244 (268)
.+.|.|+|++|++|+..+ ||||++++. + ....||++++++ +||.|||+|.|.+... ...|.|+|||. +
T Consensus 10 ~~~L~V~VieAk~L~~~d---dpYv~v~l~-~---~~~~kT~v~~kt~~glnP~WnE~F~f~~~~~-~~~L~v~V~d~~d 81 (483)
T 3bxj_A 10 DNVLKLWIIEARELPPKK---RYYCELCLD-D---MLYARTTSKPRSASGDTVFWGEHFEFNNLPA-VRALRLHLYRDSD 81 (483)
T ss_dssp EECC----------------------------------------------------CCEECC------------------
T ss_pred ccEEEEEEEEcCCcCCCC---CCeEEEEEC-C---eEEeeeeEEeCCCCCCCCccccEEEEecCCC-ccEEEEEEEecCC
Confidence 367899999999998544 999999996 1 235699999999 9999999999986432 44599999994 5
Q ss_pred C---C-CCeeeEEEEEeCCccCCC
Q psy3954 245 S---G-LNVFLGEVHIPLNNKETS 264 (268)
Q Consensus 245 ~---~-~~~~lG~~~l~l~~~~~~ 264 (268)
. . ++++||++.|+++++..+
T Consensus 82 ~~~~~~~d~~lG~v~i~l~~l~~~ 105 (483)
T 3bxj_A 82 KKRKKDKAGYVGLVTVPVATLAGR 105 (483)
T ss_dssp ------------------------
T ss_pred ccccCCCCceEEEEEEEHHHhcCC
Confidence 2 4 899999999999998764
No 95
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=99.21 E-value=2.5e-10 Score=82.13 Aligned_cols=102 Identities=20% Similarity=0.287 Sum_probs=79.9
Q ss_pred CeEEEEEEEcccCc--cccCCCCCC-ceE----EE-----eee-cccCCCCCCccCcEEEEEecCCCcEEEEEEEeCCCC
Q psy3954 53 LGTLRIRIQYTADH--ILQPHYYED-LCT----QI-----LNS-PSVNPVTSPFFGEEFQFDIPRRFRHLAVYAYDRDRT 119 (268)
Q Consensus 53 ~~~L~V~v~~~a~~--L~~~~~~~d-yv~----~~-----~~T-~~~~~t~nP~wne~f~f~v~~~~~~l~~~v~d~d~~ 119 (268)
...|+|.+. ++.- |+......| ||. +. .+| .++++|..|+|||+|.-.+.+. +.|.+.|++.. .
T Consensus 5 ~~flRi~~~-~~~~~~~~~~~~~lDPy~aV~vdE~~~~e~g~t~~~K~kT~~P~Wne~Fd~~V~~G-r~l~i~Vfh~a-~ 81 (126)
T 1yrk_A 5 APFLRIAFN-SYELGSLQAEDEANQPFCAVKMKEALSTERGKTLVQKKPTMYPEWKSTFDAHIYEG-RVIQIVLMRAA-E 81 (126)
T ss_dssp CCEEEEEEE-EEECSSCCCSSSSCCCEEEEEEEEEEEETTEEEEECCSCCBCCCTTCEEEEECCTT-CEEEEEEEEET-T
T ss_pred CccEEeeec-cccccccCCccccCCceEEEEeeeeEEcccceeecccCCCCCcCccceEEeeeeCC-EEEEEEEEcCC-C
Confidence 457888886 5542 333334678 998 22 266 7888899999999999988877 99999999777 3
Q ss_pred CCCCceeEEEEEecccccc-----ccCccceecCcccCCCcccceEEEEEEEEc
Q psy3954 120 SKTDRVLGKVTIQRSDLHR-----ISNKEHWFPLTPVTQDSEVQGKIQIGVLST 168 (268)
Q Consensus 120 ~~~d~~iG~~~i~l~~l~~-----~~~~~~w~~L~~~~~~~~~~G~i~v~l~~~ 168 (268)
++++.+.+++++|.. +...+.|++|+| .|+|++.+.|.
T Consensus 82 ----~fvAn~tV~~edL~~~c~~~~g~~e~WvdLeP-------~Gkl~~~i~~~ 124 (126)
T 1yrk_A 82 ----EPVSEVTVGVSVLAERCKKNNGKAEFWLDLQP-------QAKVLMSVQYF 124 (126)
T ss_dssp ----EEEEEEEEEHHHHHHHHHTTTTEEEEEEECBS-------SCEEEEEEEEE
T ss_pred ----CeeeEEEEEHHHHHhhhccCCCceEEEEeccc-------CcEEEEEEEEe
Confidence 799999999999983 234678999988 69999998774
No 96
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=99.16 E-value=1.8e-10 Score=84.01 Aligned_cols=104 Identities=17% Similarity=0.261 Sum_probs=82.2
Q ss_pred CCCeEEEEEEEcccCccc--c-CCCCCC-ceE----E--E---eee-cccCCCCCCccCcEEEEEecCCCcEEEEEEEeC
Q psy3954 51 QDLGTLRIRIQYTADHIL--Q-PHYYED-LCT----Q--I---LNS-PSVNPVTSPFFGEEFQFDIPRRFRHLAVYAYDR 116 (268)
Q Consensus 51 ~~~~~L~V~v~~~a~~L~--~-~~~~~d-yv~----~--~---~~T-~~~~~t~nP~wne~f~f~v~~~~~~l~~~v~d~ 116 (268)
+....|+|.+. ++.--+ + .....| ||. + . .+| .++++|..|+|||+|.-.+.+. +.|.|.|++.
T Consensus 7 ~m~~flRi~l~-~~~~~~~~~~~~~~lDPY~aV~VdE~~~te~gqtl~~KkkT~~P~Wne~Fd~~V~~G-r~l~i~Vfh~ 84 (138)
T 2enj_A 7 GMSPFLRIGLS-NFDCGSCQSCQGEAVNPYCAVLVKEYVESENGQMYIQKKPTMYPPWDSTFDAHINKG-RVMQIIVKGK 84 (138)
T ss_dssp SCCCCEEEEEE-EEECCCCCCSCCCCCCCEEEEEEEEEEEETTEEEEEEEEEEECCCSSSEEEECCCSS-CEEEEEEECS
T ss_pred ccCcceEEEee-ccccCCCCCcccccCCceEEEEeeeeeeccCceeecccCCCCCccccceEeeeEECC-eEEEEEEEcC
Confidence 33567889887 665433 2 345678 998 2 2 777 7788899999999999887777 9999999976
Q ss_pred CCCCCCCceeEEEEEecccccc-----ccCccceecCcccCCCcccceEEEEEEEEc
Q psy3954 117 DRTSKTDRVLGKVTIQRSDLHR-----ISNKEHWFPLTPVTQDSEVQGKIQIGVLST 168 (268)
Q Consensus 117 d~~~~~d~~iG~~~i~l~~l~~-----~~~~~~w~~L~~~~~~~~~~G~i~v~l~~~ 168 (268)
. . +|++.+.+++++|.. ....+.|++|+| .|+|++.+.|.
T Consensus 85 a-~----~fVAn~tV~~edL~~~ck~~~g~~e~WvdLeP-------~Gkl~v~i~~~ 129 (138)
T 2enj_A 85 N-V----DLISETTVELYSLAERCRKNNGKTEIWLELKP-------QGRMLMNARYF 129 (138)
T ss_dssp S-C----SCCEEEEEESHHHHHHHHHTTTCEEEEEECBS-------SCEEEEEEEEC
T ss_pred C-C----CeeeEEEEEHHHHHhhhccCCCceEEEEeccc-------CcEEEEEEEEE
Confidence 6 2 799999999999983 345688999988 69999998875
No 97
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=98.18 E-value=2.3e-05 Score=56.33 Aligned_cols=86 Identities=16% Similarity=0.155 Sum_probs=59.3
Q ss_pred eEEEEEceec--CCCCCCCCCCCEEEEEEEecCCcceeeec-eeccCCCCCccceEEEEEccCCCCceEEEEEEecCCCC
Q psy3954 171 SLMVNVNEAS--GLTQVNGQCDPTAMVTVHYTHNKSDVQKS-KVKKKSHSPVFNESFMFDRSLGDPIELVVSLHHDISGL 247 (268)
Q Consensus 171 ~L~v~v~~a~--~L~~~~g~~dpyv~v~l~~~~~~~~~~kT-~v~~~t~nP~~ne~f~f~v~~~~~~~l~i~V~d~~~~~ 247 (268)
.|+|.+.++. .|+......|||+.|.+..... ....+| ..+++|..|.|||.|.-.+... ..|.|.|++...
T Consensus 7 flRi~~~~~~~~~~~~~~~~lDPy~aV~vdE~~~-~e~g~t~~~K~kT~~P~Wne~Fd~~V~~G--r~l~i~Vfh~a~-- 81 (126)
T 1yrk_A 7 FLRIAFNSYELGSLQAEDEANQPFCAVKMKEALS-TERGKTLVQKKPTMYPEWKSTFDAHIYEG--RVIQIVLMRAAE-- 81 (126)
T ss_dssp EEEEEEEEEECSSCCCSSSSCCCEEEEEEEEEEE-ETTEEEEECCSCCBCCCTTCEEEEECCTT--CEEEEEEEEETT--
T ss_pred cEEeeeccccccccCCccccCCceEEEEeeeeEE-cccceeecccCCCCCcCccceEEeeeeCC--EEEEEEEEcCCC--
Confidence 4556554443 4443334589999999872211 112354 7788899999999998877432 349999997633
Q ss_pred CeeeEEEEEeCCccC
Q psy3954 248 NVFLGEVHIPLNNKE 262 (268)
Q Consensus 248 ~~~lG~~~l~l~~~~ 262 (268)
+++..|.+++.++.
T Consensus 82 -~fvAn~tV~~edL~ 95 (126)
T 1yrk_A 82 -EPVSEVTVGVSVLA 95 (126)
T ss_dssp -EEEEEEEEEHHHHH
T ss_pred -CeeeEEEEEHHHHH
Confidence 99999999988764
No 98
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=97.93 E-value=4.9e-05 Score=55.39 Aligned_cols=86 Identities=13% Similarity=0.103 Sum_probs=58.3
Q ss_pred eEEEEEceecC--CCC-CCCCCCCEEEEEEEecCCcceeeec-eeccCCCCCccceEEEEEccCCCCceEEEEEEecCCC
Q psy3954 171 SLMVNVNEASG--LTQ-VNGQCDPTAMVTVHYTHNKSDVQKS-KVKKKSHSPVFNESFMFDRSLGDPIELVVSLHHDISG 246 (268)
Q Consensus 171 ~L~v~v~~a~~--L~~-~~g~~dpyv~v~l~~~~~~~~~~kT-~v~~~t~nP~~ne~f~f~v~~~~~~~l~i~V~d~~~~ 246 (268)
.|+|.+.++.- |+. .....||||.|.+.... .....+| ..+++|..|.|||.|.-.+.. -..|.|.|++...
T Consensus 11 flRi~l~~~~~~~~~~~~~~~lDPY~aV~VdE~~-~te~gqtl~~KkkT~~P~Wne~Fd~~V~~--Gr~l~i~Vfh~a~- 86 (138)
T 2enj_A 11 FLRIGLSNFDCGSCQSCQGEAVNPYCAVLVKEYV-ESENGQMYIQKKPTMYPPWDSTFDAHINK--GRVMQIIVKGKNV- 86 (138)
T ss_dssp CEEEEEEEEECCCCCCSCCCCCCCEEEEEEEEEE-EETTEEEEEEEEEEECCCSSSEEEECCCS--SCEEEEEEECSSC-
T ss_pred ceEEEeeccccCCCCCcccccCCceEEEEeeeee-eccCceeecccCCCCCccccceEeeeEEC--CeEEEEEEEcCCC-
Confidence 45555544442 332 23358999999987221 1123566 777789999999998876643 2339999996533
Q ss_pred CCeeeEEEEEeCCccC
Q psy3954 247 LNVFLGEVHIPLNNKE 262 (268)
Q Consensus 247 ~~~~lG~~~l~l~~~~ 262 (268)
+++..|.|++.++.
T Consensus 87 --~fVAn~tV~~edL~ 100 (138)
T 2enj_A 87 --DLISETTVELYSLA 100 (138)
T ss_dssp --SCCEEEEEESHHHH
T ss_pred --CeeeEEEEEHHHHH
Confidence 89999999998774
No 99
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=96.12 E-value=0.058 Score=40.36 Aligned_cols=114 Identities=13% Similarity=0.081 Sum_probs=78.7
Q ss_pred cCCCeEEEEEEEcccCccc---c-CCCCCC--ceE------EEeeecccCCCCCCccCcEEEEEecCC--------CcEE
Q psy3954 50 IQDLGTLRIRIQYTADHIL---Q-PHYYED--LCT------QILNSPSVNPVTSPFFGEEFQFDIPRR--------FRHL 109 (268)
Q Consensus 50 ~~~~~~L~V~v~~~a~~L~---~-~~~~~d--yv~------~~~~T~~~~~t~nP~wne~f~f~v~~~--------~~~l 109 (268)
-++.+.+.|.|. ++.--+ . ...... ||. +.+-|.++. ..+|.+|-+-+|.|... ...|
T Consensus 14 ~~gEnlfEihi~-~~~~~~~~l~~~~d~~p~tF~t~dF~dfEtq~Tpv~~-G~~p~y~fts~Y~V~~d~~fl~yL~~~~l 91 (156)
T 2yrb_A 14 ERGENLFEIHIN-KVTFSSEVLQASGDKEPVTFCTYAFYDFELQTTPVVR-GLHPEYNFTSQYLVHVNDLFLQYIQKNTI 91 (156)
T ss_dssp CSSCEEEEEEEE-EECCCHHHHHHHCSSCCEEEEEECSTTCCCEECCCEE-SSSCCCCEEEEEEECCSHHHHHHHHHCCE
T ss_pred cCCCcEEEEEEe-EEEEcHHHHhhccccCCcEEEEEEEeceEeeeccccc-CCCCCcceEEEEEEEeCHHHHHHHhcCCE
Confidence 355788999999 887444 1 112223 888 666777666 78999999999998766 4589
Q ss_pred EEEEEeCCCCCCCCceeEEEEEeccccccccC-ccceecCcccCCCcccceEEEEEEEE
Q psy3954 110 AVYAYDRDRTSKTDRVLGKVTIQRSDLHRISN-KEHWFPLTPVTQDSEVQGKIQIGVLS 167 (268)
Q Consensus 110 ~~~v~d~d~~~~~d~~iG~~~i~l~~l~~~~~-~~~w~~L~~~~~~~~~~G~i~v~l~~ 167 (268)
.+++.... .+.-..||++.|++.++...++ ...-.+|..........|.|.+.+++
T Consensus 92 ~lELhqa~--g~~~~tla~~~I~l~~lLe~~~~i~g~~~L~g~~g~~~~~G~LeywiRL 148 (156)
T 2yrb_A 92 TLEVHQAY--STEYETIAACQLKFHEILEKSGRIFCTASLIGTKGDIPNFGTVEYWFRL 148 (156)
T ss_dssp EEEEEEEC--SSCEEEEEEEEECCSHHHHCCSCEEEEEEECBSSSCCTTSEEEEEEEEE
T ss_pred EEEEEEee--CCCceEEEEEEEEhHHhhCcCCceEEEEEEEcCCCCcceEEEEEEEEEE
Confidence 99998876 2345689999999999875443 33344555443322457888887765
No 100
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=95.55 E-value=0.052 Score=52.93 Aligned_cols=93 Identities=14% Similarity=0.059 Sum_probs=67.6
Q ss_pred CCeEEEEEceecCCC-CCCCCCCCEEEEEEEecCCcc-eeeeceeccCCCCCccceEEEEEccCCCCce---EEEEEEec
Q psy3954 169 PTSLMVNVNEASGLT-QVNGQCDPTAMVTVHYTHNKS-DVQKSKVKKKSHSPVFNESFMFDRSLGDPIE---LVVSLHHD 243 (268)
Q Consensus 169 ~~~L~v~v~~a~~L~-~~~g~~dpyv~v~l~~~~~~~-~~~kT~v~~~t~nP~~ne~f~f~v~~~~~~~---l~i~V~d~ 243 (268)
...+.|+|..+.++. +.....+.||.+.+..|+... ....|+.+. ..+|.|||.+.|++...++.. |.|+||+.
T Consensus 354 ~~~f~v~i~~~~~~n~~~~~~~~~~V~~~l~hG~~~L~~~~~T~~~~-~~~~~Wne~l~f~i~i~dLPr~arL~~tl~~~ 432 (1091)
T 3hhm_A 354 NSALRIKILCATYVNVNIRDIDKIYVRTGIYHGGEPLCDNVNTQRVP-CSNPRWNEWLNYDIYIPDLPRAARLCLSICSV 432 (1091)
T ss_dssp CSEEEEEEEEESCCCCCCSSCCCCCEEEEEESSSCSSCCEECCCCCC-TTSCEEEEEEEEEEEGGGCCTTCEEEEEECCC
T ss_pred CCCEEEEEEEecCCCCCccccceEEEEEEEEECCEEccCceeccccC-CCCCCCCeeEEecCccccCChhcEEEEEEEEe
Confidence 778999999999886 333357899999999766643 344555444 457889999999987766655 99999985
Q ss_pred CCC-----CCeeeEEEEEeCCccC
Q psy3954 244 ISG-----LNVFLGEVHIPLNNKE 262 (268)
Q Consensus 244 ~~~-----~~~~lG~~~l~l~~~~ 262 (268)
... .+..||.+.++|-+..
T Consensus 433 ~~~~~~~~~~~~lg~~n~~lfd~~ 456 (1091)
T 3hhm_A 433 KGRKGAKEEHCPLAWGNINLFDYT 456 (1091)
T ss_dssp CCCC-------CCEEEEEESBCTT
T ss_pred cCccCcccccceeEEeeeeeEccC
Confidence 432 2457999999886543
No 101
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=95.38 E-value=0.062 Score=51.89 Aligned_cols=93 Identities=12% Similarity=0.121 Sum_probs=68.3
Q ss_pred CCeEEEEEceecCCCCCCCCCCCEEEEEEEecCCc-ceeeeceeccCCCCCccceEEEEEccCCCCce---EEEEEEecC
Q psy3954 169 PTSLMVNVNEASGLTQVNGQCDPTAMVTVHYTHNK-SDVQKSKVKKKSHSPVFNESFMFDRSLGDPIE---LVVSLHHDI 244 (268)
Q Consensus 169 ~~~L~v~v~~a~~L~~~~g~~dpyv~v~l~~~~~~-~~~~kT~v~~~t~nP~~ne~f~f~v~~~~~~~---l~i~V~d~~ 244 (268)
...+.|.|..+.++... ...+-||.+.+..|+.. .....|..+....+|.|||.+.|++...++.. |.|+||+..
T Consensus 216 ~~~f~i~i~~~~~~~~~-~~~~~~V~~~l~~g~~~l~~~~~T~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~~ 294 (940)
T 2wxf_A 216 EQPFSIELIEGRKVNAD-ERMKLVVQAGLFHGNEMLCKTVSSSEVNVCSEPVWKQRLEFDISVCDLPRMARLCFALYAVV 294 (940)
T ss_dssp CSEEEEEEEEEECCCC----CEEEEEEEEEETTEESSCCEECCCEESCSSCEEEEEEEEEEEGGGCCTTCEEEEEEEEEC
T ss_pred CCceEEEEEEecccCCC-CCceEEEEEEEEECCEEccCceecccccCCCCcccceEEEcccccccCCcccEEEEEEEEec
Confidence 78999999999998633 34789999999866553 23455666665778999999999987766655 999999952
Q ss_pred C-----------C--CCeeeEEEEEeCCccC
Q psy3954 245 S-----------G--LNVFLGEVHIPLNNKE 262 (268)
Q Consensus 245 ~-----------~--~~~~lG~~~l~l~~~~ 262 (268)
. . ....||.+.+++-+..
T Consensus 295 ~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~~ 325 (940)
T 2wxf_A 295 EKAKKARSTKKKSKKADCPIAWANLMLFDYK 325 (940)
T ss_dssp ----------------CEEEEEEEEESBCTT
T ss_pred CCccCccccccccccccceEEEEeeeEECCc
Confidence 1 1 2469999999886643
No 102
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=95.10 E-value=0.094 Score=41.54 Aligned_cols=56 Identities=16% Similarity=0.184 Sum_probs=43.5
Q ss_pred EEeeecccCCCCCCccCcEEEEEecCC---CcEEEEEEEeCCCCCC---CCceeEEEEEecc
Q psy3954 79 QILNSPSVNPVTSPFFGEEFQFDIPRR---FRHLAVYAYDRDRTSK---TDRVLGKVTIQRS 134 (268)
Q Consensus 79 ~~~~T~~~~~t~nP~wne~f~f~v~~~---~~~l~~~v~d~d~~~~---~d~~iG~~~i~l~ 134 (268)
..++|.+...+.+|.|+|++.+.++.+ ...|.|++++..-..+ .+..+|.+-+||-
T Consensus 77 se~~S~V~YHnk~P~w~EtIKi~LP~~~~~~~HLlFtFrH~S~~~k~dk~E~pfg~a~lPL~ 138 (220)
T 3l4c_A 77 SEYKSVIYYQVKQPRWFETVKVAIPIEDVNRSHLRFTFRHRSSQDSKDKSEKIFALAFVKLM 138 (220)
T ss_dssp SCEECCCCTTCSSCCCCEEEEEEECTTSSTTEEEEEEEEECCCCSSCCCCCCEEEEEEEESB
T ss_pred eeEEEEEEEcCCCCCceEeEEEeeChhhcCCeEEEEEEEEecccccccccCCeeEEEEEEcc
Confidence 466888999999999999999999988 6889999998761111 2346787777765
No 103
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=94.88 E-value=0.51 Score=37.30 Aligned_cols=58 Identities=16% Similarity=0.122 Sum_probs=47.3
Q ss_pred ceeeeceeccCCCCCccceEEEEEccCCCCce--EEEEEEecCCC-----CCeeeEEEEEeCCcc
Q psy3954 204 SDVQKSKVKKKSHSPVFNESFMFDRSLGDPIE--LVVSLHHDISG-----LNVFLGEVHIPLNNK 261 (268)
Q Consensus 204 ~~~~kT~v~~~t~nP~~ne~f~f~v~~~~~~~--l~i~V~d~~~~-----~~~~lG~~~l~l~~~ 261 (268)
...++|.+...+.+|.|+|++-..++.+.... |.|++++.... ....+|-+.+||-.-
T Consensus 76 ~se~~S~V~YHnk~P~w~EtIKi~LP~~~~~~~HLlFtFrH~S~~~k~dk~E~pfg~a~lPL~~~ 140 (220)
T 3l4c_A 76 ISEYKSVIYYQVKQPRWFETVKVAIPIEDVNRSHLRFTFRHRSSQDSKDKSEKIFALAFVKLMRY 140 (220)
T ss_dssp BSCEECCCCTTCSSCCCCEEEEEEECTTSSTTEEEEEEEEECCCCSSCCCCCCEEEEEEEESBCT
T ss_pred ceeEEEEEEEcCCCCCceEeEEEeeChhhcCCeEEEEEEEEecccccccccCCeeEEEEEEcccC
Confidence 45688999999999999999999999887766 99999875432 235899999998654
No 104
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=94.48 E-value=0.1 Score=50.54 Aligned_cols=94 Identities=11% Similarity=0.065 Sum_probs=65.5
Q ss_pred CCeEEEEEceecCCC-CCCCCCCCEEEEEEEecCCcceeeeceeccCCCCCccceEEEEEccCCCCce---EEEEEEecC
Q psy3954 169 PTSLMVNVNEASGLT-QVNGQCDPTAMVTVHYTHNKSDVQKSKVKKKSHSPVFNESFMFDRSLGDPIE---LVVSLHHDI 244 (268)
Q Consensus 169 ~~~L~v~v~~a~~L~-~~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~~ne~f~f~v~~~~~~~---l~i~V~d~~ 244 (268)
...+.|.|..+.... ..+..++.||++.+..|+.......|..+.-+.+|.|||.+.|++...++.. |.|+||+..
T Consensus 217 ~~~f~i~i~~~~~~~~~~~~~~~~~V~~~l~~G~~~l~~~~t~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~~ 296 (961)
T 1e7u_A 217 DRKFRVKIRGIDIPVLPRTADLTVFVEANIQYGQQVLCQRRTSPKPFTEEVLWNVWLEFSIKIKDLPKGALLNLQIYCGA 296 (961)
T ss_dssp CSEEEEEEEEEECSSCCTTSCEEEEEEEEEEETTEEEEEEECCCEECCSEEEEEEEEEEEEEGGGCCTTCEEEEEEEEEE
T ss_pred cCceEEEEeecccccccCCCCceEEEEEEEEECCEEcccceeeccccCCCcccceeEEeccccccCCcccEEEEEEEecc
Confidence 677888888876421 1233468899998886665443455666666678999999999987766655 999999743
Q ss_pred CC-----------------CCeeeEEEEEeCCccC
Q psy3954 245 SG-----------------LNVFLGEVHIPLNNKE 262 (268)
Q Consensus 245 ~~-----------------~~~~lG~~~l~l~~~~ 262 (268)
.. +...||.+.+++-+..
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~lg~~n~~lfd~~ 331 (961)
T 1e7u_A 297 KPALSGKTSAEMPSPESKGKAQLLYYVNLLLIDHR 331 (961)
T ss_dssp C--------------------CEEEEEEEESBCTT
T ss_pred cCccccccccccccccccccceeEEEEeeeeecCC
Confidence 11 2458999998876543
No 105
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=94.03 E-value=0.064 Score=52.50 Aligned_cols=98 Identities=9% Similarity=0.063 Sum_probs=68.3
Q ss_pred EEEEEcCCeEEEEEceecCCCCCCCCCCCEEEEEEEecCCcc-eeeeceeccCCCCCccceEEEEEccCCCCce---EEE
Q psy3954 163 IGVLSTPTSLMVNVNEASGLTQVNGQCDPTAMVTVHYTHNKS-DVQKSKVKKKSHSPVFNESFMFDRSLGDPIE---LVV 238 (268)
Q Consensus 163 v~l~~~~~~L~v~v~~a~~L~~~~g~~dpyv~v~l~~~~~~~-~~~kT~v~~~t~nP~~ne~f~f~v~~~~~~~---l~i 238 (268)
+++.-....+.|+|..+.++... ...+-||.+.+..|+... ....|..+....+|.|||.+.|++...++.. |.|
T Consensus 346 ~s~~~~~~~f~i~i~~~~~~~~~-~~~~~~V~~~l~~g~~~L~~~~~T~~~~~~~~~~Wnewl~f~i~~~dLPr~a~L~~ 424 (1092)
T 2y3a_A 346 SHIWDNNNPFQITLVKGNKLNTE-ETVKVHVRAGLFHGTELLCKTVVSSEISGKNDHIWNEQLEFDINICDLPRMARLCF 424 (1092)
T ss_dssp --CCCCCSEEEEEECCCCCCCCC-SSCCCCCBCCEEETTEESSCCCBCCCCCSSSCCCCCEEEEEEEESSSCCTTCEEEE
T ss_pred eehhhcCCCEEEEEEEeccCCCC-CCceEEEEEEEEECCEEccCceecccccCCCCCccceeEEeCCccccCChhcEEEE
Confidence 33333388999999999998633 357899999888665532 3455666666778999999999988777765 999
Q ss_pred EEEecCCC-----------------------CCeeeEEEEEeCCcc
Q psy3954 239 SLHHDISG-----------------------LNVFLGEVHIPLNNK 261 (268)
Q Consensus 239 ~V~d~~~~-----------------------~~~~lG~~~l~l~~~ 261 (268)
+||+.... ....||.+.+++-+.
T Consensus 425 ti~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~ 470 (1092)
T 2y3a_A 425 AVYAVLDKVKTKKSTKTINPSKYQTIRKAGKVHYPVAWVNTMVFDF 470 (1092)
T ss_dssp ECCCC------------------------------CCEEEEESBCT
T ss_pred EEEEecCccccccccccccccccccccccccccceeEEEeeeeECC
Confidence 99985311 124888888887654
No 106
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=92.62 E-value=0.25 Score=47.73 Aligned_cols=85 Identities=15% Similarity=0.203 Sum_probs=57.0
Q ss_pred CCCeEEEEEEEcccCccccCCCCCC-ceE-----------EEeeecccCCCCCCccCcEEEEEecCC----CcEEEEEEE
Q psy3954 51 QDLGTLRIRIQYTADHILQPHYYED-LCT-----------QILNSPSVNPVTSPFFGEEFQFDIPRR----FRHLAVYAY 114 (268)
Q Consensus 51 ~~~~~L~V~v~~~a~~L~~~~~~~d-yv~-----------~~~~T~~~~~t~nP~wne~f~f~v~~~----~~~l~~~v~ 114 (268)
.....+.|+|. ++.++. ....++ ||. ....|+.+.-..+|.|||...|++.-. ...|.|.||
T Consensus 214 ~~~~~f~i~i~-~~~~~~-~~~~~~~~V~~~l~~g~~~l~~~~~T~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~ 291 (940)
T 2wxf_A 214 SLEQPFSIELI-EGRKVN-ADERMKLVVQAGLFHGNEMLCKTVSSSEVNVCSEPVWKQRLEFDISVCDLPRMARLCFALY 291 (940)
T ss_dssp TCCSEEEEEEE-EEECCC-C---CEEEEEEEEEETTEESSCCEECCCEESCSSCEEEEEEEEEEEGGGCCTTCEEEEEEE
T ss_pred hcCCceEEEEE-EecccC-CCCCceEEEEEEEEECCEEccCceecccccCCCCcccceEEEcccccccCCcccEEEEEEE
Confidence 44578999999 999997 223456 877 234455555567899999999985443 689999999
Q ss_pred eCCCC--C---------CCCceeEEEEEeccccc
Q psy3954 115 DRDRT--S---------KTDRVLGKVTIQRSDLH 137 (268)
Q Consensus 115 d~d~~--~---------~~d~~iG~~~i~l~~l~ 137 (268)
+.... . ..+..||-+.+++-+-.
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~~ 325 (940)
T 2wxf_A 292 AVVEKAKKARSTKKKSKKADCPIAWANLMLFDYK 325 (940)
T ss_dssp EEC----------------CEEEEEEEEESBCTT
T ss_pred EecCCccCccccccccccccceEEEEeeeEECCc
Confidence 97511 1 02347888888776543
No 107
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=92.42 E-value=0.37 Score=47.10 Aligned_cols=83 Identities=18% Similarity=0.162 Sum_probs=57.4
Q ss_pred CeEEEEEEEcccCccc-cCCCCCC-ceE-----------EEeeecccCCCCCCccCcEEEEEecCC----CcEEEEEEEe
Q psy3954 53 LGTLRIRIQYTADHIL-QPHYYED-LCT-----------QILNSPSVNPVTSPFFGEEFQFDIPRR----FRHLAVYAYD 115 (268)
Q Consensus 53 ~~~L~V~v~~~a~~L~-~~~~~~d-yv~-----------~~~~T~~~~~t~nP~wne~f~f~v~~~----~~~l~~~v~d 115 (268)
...++|+|. ++.++. +.....+ ||. ...+|+.+. ..+|.|||...|++.-. ...|.|.||+
T Consensus 354 ~~~f~v~i~-~~~~~n~~~~~~~~~~V~~~l~hG~~~L~~~~~T~~~~-~~~~~Wne~l~f~i~i~dLPr~arL~~tl~~ 431 (1091)
T 3hhm_A 354 NSALRIKIL-CATYVNVNIRDIDKIYVRTGIYHGGEPLCDNVNTQRVP-CSNPRWNEWLNYDIYIPDLPRAARLCLSICS 431 (1091)
T ss_dssp CSEEEEEEE-EESCCCCCCSSCCCCCEEEEEESSSCSSCCEECCCCCC-TTSCEEEEEEEEEEEGGGCCTTCEEEEEECC
T ss_pred CCCEEEEEE-EecCCCCCccccceEEEEEEEEECCEEccCceeccccC-CCCCCCCeeEEecCccccCChhcEEEEEEEE
Confidence 467899999 999888 4444566 887 344455444 45788999999985443 6899999999
Q ss_pred CCCCC---CCCceeEEEEEeccccc
Q psy3954 116 RDRTS---KTDRVLGKVTIQRSDLH 137 (268)
Q Consensus 116 ~d~~~---~~d~~iG~~~i~l~~l~ 137 (268)
..... .....||-+.++|-+-.
T Consensus 432 ~~~~~~~~~~~~~lg~~n~~lfd~~ 456 (1091)
T 3hhm_A 432 VKGRKGAKEEHCPLAWGNINLFDYT 456 (1091)
T ss_dssp CCCCC-------CCEEEEEESBCTT
T ss_pred ecCccCcccccceeEEeeeeeEccC
Confidence 76211 12357899999877654
No 108
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=90.76 E-value=0.44 Score=46.72 Aligned_cols=65 Identities=12% Similarity=0.199 Sum_probs=47.6
Q ss_pred CCCeEEEEEEEcccCccccCCCCCC-ceE-----------EEeeecccCCCCCCccCcEEEEEecCC----CcEEEEEEE
Q psy3954 51 QDLGTLRIRIQYTADHILQPHYYED-LCT-----------QILNSPSVNPVTSPFFGEEFQFDIPRR----FRHLAVYAY 114 (268)
Q Consensus 51 ~~~~~L~V~v~~~a~~L~~~~~~~d-yv~-----------~~~~T~~~~~t~nP~wne~f~f~v~~~----~~~l~~~v~ 114 (268)
.....++|+|. ++.++. .....+ ||. ...+|+.+.-..+|.|||...|.+.-. ...|.|.||
T Consensus 350 ~~~~~f~i~i~-~~~~~~-~~~~~~~~V~~~l~~g~~~L~~~~~T~~~~~~~~~~Wnewl~f~i~~~dLPr~a~L~~ti~ 427 (1092)
T 2y3a_A 350 DNNNPFQITLV-KGNKLN-TEETVKVHVRAGLFHGTELLCKTVVSSEISGKNDHIWNEQLEFDINICDLPRMARLCFAVY 427 (1092)
T ss_dssp CCCSEEEEEEC-CCCCCC-CCSSCCCCCBCCEEETTEESSCCCBCCCCCSSSCCCCCEEEEEEEESSSCCTTCEEEEECC
T ss_pred hcCCCEEEEEE-EeccCC-CCCCceEEEEEEEEECCEEccCceecccccCCCCCccceeEEeCCccccCChhcEEEEEEE
Confidence 33568999999 999997 224567 777 334455555567899999999985544 689999999
Q ss_pred eCC
Q psy3954 115 DRD 117 (268)
Q Consensus 115 d~d 117 (268)
+..
T Consensus 428 ~~~ 430 (1092)
T 2y3a_A 428 AVL 430 (1092)
T ss_dssp CC-
T ss_pred Eec
Confidence 863
No 109
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=87.86 E-value=1 Score=43.63 Aligned_cols=84 Identities=12% Similarity=0.063 Sum_probs=53.7
Q ss_pred CeEEEEEEEcccCccc-cCCCCCC-ceE----------EEeeecccCCCCCCccCcEEEEEecCC----CcEEEEEEEeC
Q psy3954 53 LGTLRIRIQYTADHIL-QPHYYED-LCT----------QILNSPSVNPVTSPFFGEEFQFDIPRR----FRHLAVYAYDR 116 (268)
Q Consensus 53 ~~~L~V~v~~~a~~L~-~~~~~~d-yv~----------~~~~T~~~~~t~nP~wne~f~f~v~~~----~~~l~~~v~d~ 116 (268)
...++|+|. .+.... ..+..++ ||. ...+|..+.-+.+|.|||...|.+.-. ...|.|.||+.
T Consensus 217 ~~~f~i~i~-~~~~~~~~~~~~~~~~V~~~l~~G~~~l~~~~t~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~ 295 (961)
T 1e7u_A 217 DRKFRVKIR-GIDIPVLPRTADLTVFVEANIQYGQQVLCQRRTSPKPFTEEVLWNVWLEFSIKIKDLPKGALLNLQIYCG 295 (961)
T ss_dssp CSEEEEEEE-EEECSSCCTTSCEEEEEEEEEEETTEEEEEEECCCEECCSEEEEEEEEEEEEEGGGCCTTCEEEEEEEEE
T ss_pred cCceEEEEe-ecccccccCCCCceEEEEEEEEECCEEcccceeeccccCCCcccceeEEeccccccCCcccEEEEEEEec
Confidence 457889999 876422 2334456 887 234565555567899999988874433 68999999985
Q ss_pred CCCC---------------CCCceeEEEEEeccccc
Q psy3954 117 DRTS---------------KTDRVLGKVTIQRSDLH 137 (268)
Q Consensus 117 d~~~---------------~~d~~iG~~~i~l~~l~ 137 (268)
.... ++...||-+.++|-+-.
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~lg~~n~~lfd~~ 331 (961)
T 1e7u_A 296 AKPALSGKTSAEMPSPESKGKAQLLYYVNLLLIDHR 331 (961)
T ss_dssp EC--------------------CEEEEEEEESBCTT
T ss_pred ccCccccccccccccccccccceeEEEEeeeeecCC
Confidence 4111 12346788777766543
No 110
>2qzq_A Axin interactor, dorsalization associated protein; beta sheet sandwich, coiled coil, signaling protein, lipid binding protein; 1.90A {Danio rerio} PDB: 2qz5_A
Probab=82.07 E-value=2.8 Score=30.98 Aligned_cols=91 Identities=16% Similarity=0.190 Sum_probs=55.7
Q ss_pred EEEEEceecCCCCCCCCCCCEEEEEEEecCCc--ceeeeceec--cCCCCCccceEEEEEccCCCCce---EEEEEEecC
Q psy3954 172 LMVNVNEASGLTQVNGQCDPTAMVTVHYTHNK--SDVQKSKVK--KKSHSPVFNESFMFDRSLGDPIE---LVVSLHHDI 244 (268)
Q Consensus 172 L~v~v~~a~~L~~~~g~~dpyv~v~l~~~~~~--~~~~kT~v~--~~t~nP~~ne~f~f~v~~~~~~~---l~i~V~d~~ 244 (268)
|.|.|.+. +|.+.....|||+.|++....+. ...+.|.+. +....-.||.....+-+.+.+.. |.|++.++.
T Consensus 16 l~v~Ie~i-glkda~~~~~P~~tVSV~D~~G~~ve~~QdTpv~~~~~~~yv~f~~~v~lqtple~lp~G~aivfElkH~k 94 (152)
T 2qzq_A 16 LTLTIEKI-GLKDAGQCIDPYITVSVKDLNGIDLNPVQDTPVATRKEDTYIHFSVDVEIQRHLEKLPKGAAIFFEFKHYK 94 (152)
T ss_dssp EEEEEEEE-ECTTGGGCEEEEEEEEEECTTSCBSSCCEECCCCCEECSSEEEEEEEEECSSCGGGSCTTCEEEEEEEEEE
T ss_pred EEEEEEEE-EeCCHHHccCCeEEEEEEcCCCCCccccccCCCcceecCCeEEEeeEEEeeCcHHHCCCCcEEEEEEEEec
Confidence 44555544 67766667899999999854442 345666655 22223346665555555555544 888888875
Q ss_pred CCC--CeeeEEEEEeCCccCC
Q psy3954 245 SGL--NVFLGEVHIPLNNKET 263 (268)
Q Consensus 245 ~~~--~~~lG~~~l~l~~~~~ 263 (268)
..+ -...+.+.+.++++..
T Consensus 95 ~kkkk~S~kCw~f~~~d~i~~ 115 (152)
T 2qzq_A 95 PKKRFTSTKCFAFMEMDEIKP 115 (152)
T ss_dssp TTTTEEEEEEEEEEEGGGCCS
T ss_pred ccceeeeeeeEEEEEhhhccc
Confidence 542 2355667777777654
No 111
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=72.61 E-value=4.1 Score=30.31 Aligned_cols=71 Identities=13% Similarity=0.190 Sum_probs=49.8
Q ss_pred CCCEEEEEEEecCCcceeeeceeccCCCCCccceEEEEEccCCCC-----ce--EEEEEEecCCCCCeeeEEEEEeCCcc
Q psy3954 189 CDPTAMVTVHYTHNKSDVQKSKVKKKSHSPVFNESFMFDRSLGDP-----IE--LVVSLHHDISGLNVFLGEVHIPLNNK 261 (268)
Q Consensus 189 ~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~~ne~f~f~v~~~~~-----~~--l~i~V~d~~~~~~~~lG~~~l~l~~~ 261 (268)
.+|..=+.+. --....+.|.+.+ ..+|.||-+-.|.|..+++ +. +.++++......-+.||.+.|+|..+
T Consensus 40 ~~p~tF~t~d--F~dfEtq~Tpv~~-G~~p~y~fts~Y~V~~d~~fl~yL~~~~l~lELhqa~g~~~~tla~~~I~l~~l 116 (156)
T 2yrb_A 40 KEPVTFCTYA--FYDFELQTTPVVR-GLHPEYNFTSQYLVHVNDLFLQYIQKNTITLEVHQAYSTEYETIAACQLKFHEI 116 (156)
T ss_dssp SCCEEEEEEC--STTCCCEECCCEE-SSSCCCCEEEEEEECCSHHHHHHHHHCCEEEEEEEECSSCEEEEEEEEECCSHH
T ss_pred cCCcEEEEEE--EeceEeeeccccc-CCCCCcceEEEEEEEeCHHHHHHHhcCCEEEEEEEeeCCCceEEEEEEEEhHHh
Confidence 3555444443 1124567777777 6899999999998854432 11 99999997544778999999999877
Q ss_pred C
Q psy3954 262 E 262 (268)
Q Consensus 262 ~ 262 (268)
.
T Consensus 117 L 117 (156)
T 2yrb_A 117 L 117 (156)
T ss_dssp H
T ss_pred h
Confidence 4
No 112
>2qzq_A Axin interactor, dorsalization associated protein; beta sheet sandwich, coiled coil, signaling protein, lipid binding protein; 1.90A {Danio rerio} PDB: 2qz5_A
Probab=32.69 E-value=84 Score=23.03 Aligned_cols=87 Identities=8% Similarity=0.027 Sum_probs=50.8
Q ss_pred cCCCeEEEEEEEcccCccccCCCCCC-ceE------------EEeeecccCC--CCCCccCcEEEEEecCC----CcEEE
Q psy3954 50 IQDLGTLRIRIQYTADHILQPHYYED-LCT------------QILNSPSVNP--VTSPFFGEEFQFDIPRR----FRHLA 110 (268)
Q Consensus 50 ~~~~~~L~V~v~~~a~~L~~~~~~~d-yv~------------~~~~T~~~~~--t~nP~wne~f~f~v~~~----~~~l~ 110 (268)
.++...|.|.|. +- +|.|.....| |+. ..+.|.+... +..=.||...++..+.+ +..+.
T Consensus 10 ~pg~t~l~v~Ie-~i-glkda~~~~~P~~tVSV~D~~G~~ve~~QdTpv~~~~~~~yv~f~~~v~lqtple~lp~G~aiv 87 (152)
T 2qzq_A 10 EPGMTLLTLTIE-KI-GLKDAGQCIDPYITVSVKDLNGIDLNPVQDTPVATRKEDTYIHFSVDVEIQRHLEKLPKGAAIF 87 (152)
T ss_dssp CTTCCEEEEEEE-EE-ECTTGGGCEEEEEEEEEECTTSCBSSCCEECCCCCEECSSEEEEEEEEECSSCGGGSCTTCEEE
T ss_pred CCCCeEEEEEEE-EE-EeCCHHHccCCeEEEEEEcCCCCCccccccCCCcceecCCeEEEeeEEEeeCcHHHCCCCcEEE
Confidence 344566777777 55 8876666777 665 3445665522 22234665555543333 67899
Q ss_pred EEEEeCCCCCCCCceeEEEEEecccccc
Q psy3954 111 VYAYDRDRTSKTDRVLGKVTIQRSDLHR 138 (268)
Q Consensus 111 ~~v~d~d~~~~~d~~iG~~~i~l~~l~~ 138 (268)
|++.++...-.+-...+-+.++++++..
T Consensus 88 fElkH~k~kkkk~S~kCw~f~~~d~i~~ 115 (152)
T 2qzq_A 88 FEFKHYKPKKRFTSTKCFAFMEMDEIKP 115 (152)
T ss_dssp EEEEEEETTTTEEEEEEEEEEEGGGCCS
T ss_pred EEEEEecccceeeeeeeEEEEEhhhccc
Confidence 9999987211222244556677777654
Done!