Query psy3959
Match_columns 431
No_of_seqs 243 out of 1530
Neff 7.9
Searched_HMMs 46136
Date Fri Aug 16 21:43:10 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3959.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/3959hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1092|consensus 100.0 4.3E-90 9.3E-95 665.0 21.9 416 9-425 1-484 (484)
2 KOG4567|consensus 100.0 1.4E-52 3E-57 391.4 27.3 296 101-418 5-364 (370)
3 KOG2058|consensus 100.0 5E-45 1.1E-49 363.7 21.4 255 100-396 118-385 (436)
4 smart00164 TBC Domain in Tre-2 100.0 9.9E-40 2.2E-44 301.7 16.8 193 127-356 2-198 (199)
5 KOG2223|consensus 100.0 7.4E-38 1.6E-42 302.8 19.0 247 117-395 289-540 (586)
6 COG5210 GTPase-activating prot 100.0 2E-37 4.2E-42 323.6 22.7 248 105-390 183-439 (496)
7 PF00566 RabGAP-TBC: Rab-GTPas 100.0 9.2E-36 2E-40 277.4 22.3 213 132-378 1-214 (214)
8 KOG1093|consensus 100.0 2.2E-33 4.8E-38 280.2 20.3 264 105-420 331-596 (725)
9 KOG1091|consensus 100.0 2.9E-31 6.2E-36 265.2 18.8 284 132-421 27-369 (625)
10 KOG2222|consensus 100.0 3.1E-30 6.8E-35 252.1 20.1 261 108-414 149-418 (848)
11 KOG4347|consensus 100.0 1E-30 2.2E-35 265.5 16.5 272 99-413 167-456 (671)
12 KOG2224|consensus 100.0 6.9E-30 1.5E-34 247.3 15.2 297 115-422 420-737 (781)
13 KOG4436|consensus 100.0 1.5E-28 3.2E-33 253.3 18.8 259 94-396 538-809 (948)
14 KOG2197|consensus 99.9 6.9E-27 1.5E-31 240.5 10.8 264 127-421 175-448 (488)
15 KOG1102|consensus 99.9 1.1E-25 2.3E-30 227.6 14.2 242 116-402 132-376 (397)
16 KOG2595|consensus 99.9 1.6E-24 3.4E-29 205.5 17.6 251 115-418 44-304 (395)
17 KOG2221|consensus 99.9 1.6E-25 3.6E-30 200.2 0.9 189 102-331 72-267 (267)
18 KOG4436|consensus 99.6 8.3E-15 1.8E-19 152.4 15.3 256 116-412 171-438 (948)
19 KOG3636|consensus 99.6 6.3E-15 1.4E-19 144.5 12.5 177 206-415 91-272 (669)
20 KOG2801|consensus 99.1 2.1E-09 4.5E-14 101.2 13.1 252 117-414 30-293 (559)
21 KOG1648|consensus 98.6 1.8E-09 4E-14 107.6 -3.7 274 73-395 508-787 (813)
22 PF14961 BROMI: Broad-minded p 97.6 0.0015 3.3E-08 72.8 16.0 162 209-398 1085-1264(1296)
23 KOG1092|consensus 93.4 0.0079 1.7E-07 60.2 -3.0 72 172-243 237-308 (484)
24 KOG2197|consensus 83.4 1.1 2.3E-05 47.2 3.6 67 105-171 50-121 (488)
25 KOG2224|consensus 73.0 1.3 2.9E-05 44.7 0.5 30 258-287 545-576 (781)
26 PF08109 Antimicrobial14: Lact 47.6 14 0.0003 22.3 1.5 15 224-238 3-17 (31)
27 PF10815 ComZ: ComZ; InterPro 43.7 50 0.0011 23.5 4.0 40 300-339 5-44 (56)
28 cd00248 Mth938-like Mth938-lik 22.5 35 0.00076 28.1 0.5 38 307-357 66-103 (109)
29 PF09597 IGR: IGR protein moti 22.0 1.1E+02 0.0023 22.3 2.9 31 102-138 16-47 (57)
30 PF07803 GSG-1: GSG1-like prot 21.6 56 0.0012 27.3 1.5 47 7-59 28-82 (118)
31 PF12588 PSDC: Phophatidylseri 20.3 1E+02 0.0023 26.7 3.0 36 192-227 84-121 (141)
No 1
>KOG1092|consensus
Probab=100.00 E-value=4.3e-90 Score=664.97 Aligned_cols=416 Identities=55% Similarity=0.913 Sum_probs=371.9
Q ss_pred cccccCCCCCCCCCCCCCCCCCC----------CCCCCCccHHHHhhccCcCCCCCCccccCCCCCCchhhhhhhHHHHH
Q psy3959 9 FWKKNSHNVPGRPSPKKSVFSSS----------SQSNANSSFQAYQASISDAWVIDDDEFCSPNVNISKKVAQSAALNVI 78 (431)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (431)
+|++++.++||+.+||||.++.+ .+....++|++|+.|++||||.++++.+-...+..+.++.+++.++.
T Consensus 1 ~~~~s~~~~~~s~~~~~ga~s~~~d~~~~~~~~~a~~~~~~~~~~~~s~s~a~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (484)
T KOG1092|consen 1 PSLYSSSTTKGSSLPVYGASSPPRDTSDGNFRAMAKGRVSTFQDYEPSVSDAWDEGDDDELLRSASAAKHVAPSAAGSVS 80 (484)
T ss_pred CCccccCCCCCCcccCCCCCCCCccccccchhheeccccchhhhcCCCcCcccccCChHHHHHHHHHhhhhcccccchhh
Confidence 46777778899999999977654 22347799999999999999999666432225555566667777777
Q ss_pred HhcccccCCC-------------------C---CCC------------------CC------C-----------CCChhh
Q psy3959 79 NNHKTKQFET-------------------S---SSS------------------RN------S-----------KVNESE 101 (431)
Q Consensus 79 ~~h~~~~~~~-------------------l---p~~------------------~~------~-----------~~~~~e 101 (431)
.+++...+.. + ++. .. + ..+.+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~q~~da~~~~~~~s~~~st~~~~~~~~s~~~~~s~~~r~~~~~~~~~~~~~r~~~~~~s~~~ 160 (484)
T KOG1092|consen 81 RNCSQSTEVNAKGTKYFSQQDEDASIDDPNSSVVSSTPSTSSSTSSSSNSISNQGRSALRNYPGMPQLQRHSSNVESNRI 160 (484)
T ss_pred hhhhcccCCCccccccccccccccCcccCCCCCCCCCcCcCCcccccCCcccccchhhhccCCCChhhhhhhhhhhHHHH
Confidence 7766654430 0 000 00 0 112244
Q ss_pred HHHHHHHHHHhccCCCCHHHHHHHHHCCCCCCcHHHHHHHhhCCCCCChHHHHHHHHHHHHHHHHHHHHHccCCCC-chh
Q psy3959 102 SSKIAKFNALLNLNLLNLEELRSLAWSGIPNQVRPDAWRLLAGYLPTSSERRQQVLERKRTEYWVFVKQYYDTDRD-ETY 180 (431)
Q Consensus 102 ~~r~~k~~~ll~~~~~d~~~L~~l~~~GIP~~~R~~vW~~Llg~lp~~~~~~~~~l~~~~~~Y~~l~~~~~~~~~~-~~~ 180 (431)
.+|+.++...+..+.+|.++||++||.|||..+|+.+|++|+||+|++.++++.++++++.+|..++.+++....+ +..
T Consensus 161 ~s~i~~~~~~~~~~~id~~~Lr~l~w~Gvp~~~Rp~~Wkll~gylp~n~~rr~~~l~~Kr~eY~~~v~~~~~~~~~~~~~ 240 (484)
T KOG1092|consen 161 FSRISKFGSILDSPIIDLEKLRKLCWNGVPSKMRPIVWKLLSGYLPPNSDRREGTLQRKRKEYVDSVVQYFDSLTNGDED 240 (484)
T ss_pred HhccCcccccCCcccccHHHHHHHccCCCCccccCccceeeecccCcchhhhhhhHHHHHHHHHHHHHHHhccCCCcccc
Confidence 5567778888877889999999999999999999999999999999999999999999999999999999998865 777
Q ss_pred HHHHHHHHHhcccCCcchhhhcchHHHHHHHHHHHHHHHhCCCCCCCCChhHHHHHHHHHHhhccCCCCCcccccccCCC
Q psy3959 181 QDIYRQIHIDIPRMSPLMMLFQQKLVQEMFERILFIWAIRHPASGYVQGINDLVTPFFVVFLQEFLPVGTDLEQLDLSTL 260 (431)
Q Consensus 181 ~~~~~qI~~Dv~Rt~p~~~~f~~~~~~~~L~rIL~~~a~~~p~igY~QGm~~iva~ll~v~~~~~~~~~~~~~~~~~~~~ 260 (431)
.++++||..|++||.|..++|+++.+|++++|||++|+++||.+||+||+|++++|||++|+.+|++...++..+|+..+
T Consensus 241 ~d~~rQI~id~prm~p~~~l~q~~~vq~~lerIl~iwairhpAsGyvqgindlvtpf~vvfl~e~l~~~~~~~~~d~~~l 320 (484)
T KOG1092|consen 241 QDTWRQIPIDIPRMNPHIPLFQQKIVQEMLERILYIWAIRHPASGYVQGINDLVTPFFVVFLSEYLGPIMDVESIDMSLL 320 (484)
T ss_pred CccccccccCCCCCCccccchhhHHHHHHHHHHHHHHHHhcccccccccceeeechhhhhhhHhhcCccccccccchhhc
Confidence 89999999999999999999999999999999999999999999999999999999999999999987688889998889
Q ss_pred chhhhhhhHHHHHHHHHHHHhhhhhhhccchhhHHHHHHHHHHHHHHhcHHHHHHHHHcCCCcchhhhhHHHHHhccCCC
Q psy3959 261 PKEQRDIIEADSFCCLSKFLDGIQDNYIFAQLGIQQKVNQLKDLIQRIDTNLHNHLLKHGVDYLQFSFRWMNNLLTREVP 340 (431)
Q Consensus 261 ~~e~~~~iE~daF~~l~~ll~~~~~~f~~~~~~i~~~~~~l~~ll~~~dp~L~~hL~~~~v~~~~f~~~W~~tlF~~~lp 340 (431)
+.|.++.||+|||||+.+|+++|++||++.+||||.+++.|++|++++|+.||+||+++||++.+|+||||+|||+|++|
T Consensus 321 ~~E~~~~iEADsyWClskLLD~IQDNYtfaQpGIq~kV~~L~eLv~RID~~~hkHlq~~gveylQFAFRWmNcLLmRE~p 400 (484)
T KOG1092|consen 321 PAENAEDIEADAYWCLSKLLDGIQDNYTFAQPGIQRKVKNLKELVQRIDEPLHKHLQEHGVEYLQFAFRWMNCLLMREFP 400 (484)
T ss_pred cHHHHhhhhhhHHHHHHHHHHHhhhhhhhcChhHHHHHHHHHHHHHHhcHHHHHHHHHhchHHHHHHHHHHHHHHHhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHhccCCHHHHHHHHhCCCCCCCCcccHHHHHHHHHHHHHHhccc
Q psy3959 341 LRCSIRLWDTYLAESDDFAAFQLYVCAAFLLHWRQKLLRERDFQGLMLMLQNLPTSNWSDHDIGVLVAEAYRLKVAFADA 420 (431)
Q Consensus 341 ~~~~lRlWD~~l~eg~~~~~fl~~v~~AiL~~~r~~Ll~~~d~~~ll~~L~~lp~~~~~~~di~~Ll~~A~~L~~~~~~a 420 (431)
+.+++||||+|++|+++|++||+|||+|+|+.|+++|+ ++||++++.||||+|+++|+++||+.|+++||+++++|.+|
T Consensus 401 l~~~iRlWDTY~aE~dgf~~FhvYvcAAFL~kW~~eL~-e~DFQ~~ilfLQnlPT~~W~d~eIellLseA~~~k~~f~da 479 (484)
T KOG1092|consen 401 LRCTIRLWDTYLAEPDGFNEFHVYVCAAFLLKWSSELM-ENDFQELILFLQNLPTHNWSDREIELLLSEAFRLKSVFSDA 479 (484)
T ss_pred chhHHHHHHHhhcCccchHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHhcCCCCCccHHHHHHHHHHHHHHHHHHccc
Confidence 99999999999999999999999999999999999999 79999999999999999999999999999999999999999
Q ss_pred ccccc
Q psy3959 421 PNHLS 425 (431)
Q Consensus 421 ~~~~~ 425 (431)
|+|++
T Consensus 480 ~~H~~ 484 (484)
T KOG1092|consen 480 PNHLR 484 (484)
T ss_pred hhccC
Confidence 99985
No 2
>KOG4567|consensus
Probab=100.00 E-value=1.4e-52 Score=391.44 Aligned_cols=296 Identities=36% Similarity=0.651 Sum_probs=265.2
Q ss_pred hHHHHHHHHHHhccCC--CCHHHHHHHHHCCCC--CCcHHHHHHHhhCCCCCChHHHHHHHHHHHHHHHHHHHHHccCC-
Q psy3959 101 ESSKIAKFNALLNLNL--LNLEELRSLAWSGIP--NQVRPDAWRLLAGYLPTSSERRQQVLERKRTEYWVFVKQYYDTD- 175 (431)
Q Consensus 101 e~~r~~k~~~ll~~~~--~d~~~L~~l~~~GIP--~~~R~~vW~~Llg~lp~~~~~~~~~l~~~~~~Y~~l~~~~~~~~- 175 (431)
..+|.+.+.+.++.+. +|.++||+++..|+| ..+|+.+|++|+||+|++...|...+.++|..|..++++.....
T Consensus 5 ~~~r~~~~edvl~~~~~~id~kelr~~~~~g~p~~~~lR~~~WkllL~Yl~~er~~w~s~La~~R~~Y~q~i~e~v~epg 84 (370)
T KOG4567|consen 5 YKERIKSIEDVLNPADDTIDLKELRKLCFYGVPDDASLRPLVWKLLLGYLPPERSKWTSFLAKKRSLYKQFIEEIVDEPG 84 (370)
T ss_pred hhhhhhhHHHhhccccchhhHHHHHHHhhcCCCCccchhHhHHHHHHhhcChhhhhhHHHHHHHHHHHHHHHHHhccCcc
Confidence 4567778888887754 899999999999999 68999999999999999999999999999999999999875432
Q ss_pred ----------CC--c----------------hhHHHHHHHHHhcccCCcchhhhcchH----------------------
Q psy3959 176 ----------RD--E----------------TYQDIYRQIHIDIPRMSPLMMLFQQKL---------------------- 205 (431)
Q Consensus 176 ----------~~--~----------------~~~~~~~qI~~Dv~Rt~p~~~~f~~~~---------------------- 205 (431)
++ + .+.+...||++||.||+|+..+|+...
T Consensus 85 ~~~~~~~v~~~D~~~dhPls~~~~sdwn~ff~d~e~l~QIdrDvrr~~pdi~ff~~~~~~p~~~~~~~~~~i~~~q~~~~ 164 (370)
T KOG4567|consen 85 KKDNSKKVDSNDTDEDHPLSLGPTSDWNTFFKDCEVLLQIDRDVRRTHPDISFFQLASSYPCRQGMDSRRRINASQEAGR 164 (370)
T ss_pred ccccccccccCcccccCCCCCCchhhHHHHhhhhHHHHHHHHHHHHhCcchHhhhhccccccccchhhHhhhhhhhHhhh
Confidence 11 0 134678899999999999999997321
Q ss_pred -----HHHHHHHHHHHHHHhCCCCCCCCChhHHHHHHHHHHhhccCCCCCcccccccCCCchhhhhhhHHHHHHHHHHHH
Q psy3959 206 -----VQEMFERILFIWAIRHPASGYVQGINDLVTPFFVVFLQEFLPVGTDLEQLDLSTLPKEQRDIIEADSFCCLSKFL 280 (431)
Q Consensus 206 -----~~~~L~rIL~~~a~~~p~igY~QGm~~iva~ll~v~~~~~~~~~~~~~~~~~~~~~~e~~~~iE~daF~~l~~ll 280 (431)
.....+|||++||..||.+|||||||.|+||+++||.. +++.|...++|+|||.||.+||
T Consensus 165 n~~gl~~~~~erilfiyAKLNpGi~YVQGMNEIlaPiYYVfa~---------------Dpd~e~~~~aEaDaFFCF~~LM 229 (370)
T KOG4567|consen 165 NRLGLTRFAAERILFIYAKLNPGIGYVQGMNEILAPIYYVFAN---------------DPDEENRAYAEADAFFCFTQLM 229 (370)
T ss_pred cccchhhhHHHHHHHHHhhcCCcchHHhhhHHHhhhhheeecc---------------CCchhhHHhhhhhHHHHHHHHH
Confidence 12345899999999999999999999999999999875 5678888999999999999999
Q ss_pred hhhhhhhccc----hhhHHHHHHHHHHHHHHhcHHHHHHHHHcCCCcchhhhhHHHHHhccCCChhhHHHHHHHHhcCCC
Q psy3959 281 DGIQDNYIFA----QLGIQQKVNQLKDLIQRIDTNLHNHLLKHGVDYLQFSFRWMNNLLTREVPLRCSIRLWDTYLAESD 356 (431)
Q Consensus 281 ~~~~~~f~~~----~~~i~~~~~~l~~ll~~~dp~L~~hL~~~~v~~~~f~~~W~~tlF~~~lp~~~~lRlWD~~l~eg~ 356 (431)
..++++|..+ ..||...+..+.++++.+|-+||+||++.+|.|+.|+|||+.+||+.+||+++++||||.+|+++.
T Consensus 230 seirDnf~k~LDdS~~GI~~~Msr~~~~lk~~D~EL~~~L~~~~i~PqfyaFRWitLLLsQEF~lpDvi~lWDsl~sD~~ 309 (370)
T KOG4567|consen 230 SEIRDNFIKTLDDSVGGIHFLMSRLSELLKKHDEELWRHLEEKEIHPQFYAFRWITLLLSQEFPLPDVIRLWDSLLSDPQ 309 (370)
T ss_pred HHHHHHHHHhccccccchHHHHHHHHHHHHHhhHHHHHHHHhcCCCccchhHHHHHHHHhccCCchhHHHHHHHHhcChh
Confidence 9999999863 468888899999999999999999999999999999999999999999999999999999999999
Q ss_pred CchhHHHHHHHHHHHHHHHHHhccCCHHHHHHHHhCCCCCCCCcccHHHHHHHHHHHHHHhc
Q psy3959 357 DFAAFQLYVCAAFLLHWRQKLLRERDFQGLMLMLQNLPTSNWSDHDIGVLVAEAYRLKVAFA 418 (431)
Q Consensus 357 ~~~~fl~~v~~AiL~~~r~~Ll~~~d~~~ll~~L~~lp~~~~~~~di~~Ll~~A~~L~~~~~ 418 (431)
+|. |++++|.|+|+..|+.|+ ..||..-|++||++|+. |+..+++-|-.|+..-.
T Consensus 310 rfd-~Ll~iCcsmlil~Re~il-~~DF~~nmkLLQ~yp~t-----di~~~l~~A~~Lr~~k~ 364 (370)
T KOG4567|consen 310 RFD-FLLYICCSMLILVRERIL-EGDFTVNMKLLQNYPTT-----DISKMLAVADSLRDKKH 364 (370)
T ss_pred hhH-HHHHHHHHHHHHHHHHHH-hcchHHHHHHHhcCCCC-----CHHHHHHHHHHHHhccc
Confidence 975 889999999999999999 69999999999999997 99999999999985443
No 3
>KOG2058|consensus
Probab=100.00 E-value=5e-45 Score=363.67 Aligned_cols=255 Identities=24% Similarity=0.412 Sum_probs=224.7
Q ss_pred hhHHHHHHHHHHhccC---------CCCHHHHHHHHHCCCCCCcHHHHHHHhhCCCCCChHHHHHHHHHHHHHHHHHHHH
Q psy3959 100 SESSKIAKFNALLNLN---------LLNLEELRSLAWSGIPNQVRPDAWRLLAGYLPTSSERRQQVLERKRTEYWVFVKQ 170 (431)
Q Consensus 100 ~e~~r~~k~~~ll~~~---------~~d~~~L~~l~~~GIP~~~R~~vW~~Llg~lp~~~~~~~~~l~~~~~~Y~~l~~~ 170 (431)
.+..|..+|...+... ..-.++|++++++|||+.+|+.||..++|.. ...+.+..|+.+...
T Consensus 118 ~~~r~~~~~~l~~~~~~~~~~~~~~~~~s~elk~liRkGiP~~~R~~VW~~~~g~~---------~~~~~~~~yq~ll~~ 188 (436)
T KOG2058|consen 118 YEERRQLRWELELQSNIKLHSPNDFPPRSDELKRLIRKGIPPELRGEVWWVLSGAR---------RQLNYPGYYQELLRK 188 (436)
T ss_pred hhhhHHHHHHHHhhhhhcccccccccCCcHHHHHHHHcCCChhhhhHHHHHHhcch---------hhccCchhHHHHHhc
Confidence 3445667788777652 1336899999999999999999999999830 111226788888776
Q ss_pred HccCCCCchhHHHHHHHHHhcccCCcch-hhhcch--HHHHHHHHHHHHHHHhCCCCCCCCChhHHHHHHHHHHhhccCC
Q psy3959 171 YYDTDRDETYQDIYRQIHIDIPRMSPLM-MLFQQK--LVQEMFERILFIWAIRHPASGYVQGINDLVTPFFVVFLQEFLP 247 (431)
Q Consensus 171 ~~~~~~~~~~~~~~~qI~~Dv~Rt~p~~-~~f~~~--~~~~~L~rIL~~~a~~~p~igY~QGm~~iva~ll~v~~~~~~~ 247 (431)
. ++...+..+||+.|+.||+|++ +.|..+ .++..|+|||.|||.+||.||||||||.|||++|+++.+
T Consensus 189 ~-----~~~~~~~~~qI~~DL~RTfP~n~~~~~~~~~~~~~~LrRvL~Aya~hNp~vGYCQGmNflAallLL~~~~---- 259 (436)
T KOG2058|consen 189 G-----DEKKSPVVKQIKLDLPRTFPDNFKGFDSEDSDGRQTLRRVLLAYARHNPSVGYCQGMNFLAALLLLLMPS---- 259 (436)
T ss_pred C-----CCccchHHHHHHhccccccCCCcccCCCCCchHHHHHHHHHHHHHhhCCCCcchhhHHHHHHHHHHhcCC----
Confidence 3 3333478899999999999999 788744 458999999999999999999999999999999998876
Q ss_pred CCCcccccccCCCchhhhhhhHHHHHHHHHHHHhhh-hhhhccchhhHHHHHHHHHHHHHHhcHHHHHHHHHcCCCcchh
Q psy3959 248 VGTDLEQLDLSTLPKEQRDIIEADSFCCLSKFLDGI-QDNYIFAQLGIQQKVNQLKDLIQRIDTNLHNHLLKHGVDYLQF 326 (431)
Q Consensus 248 ~~~~~~~~~~~~~~~e~~~~iE~daF~~l~~ll~~~-~~~f~~~~~~i~~~~~~l~~ll~~~dp~L~~hL~~~~v~~~~f 326 (431)
|++|||||+.+++++ .+||+.+..|.+..+.+|+.+++..+|+|+.||..+|++..++
T Consensus 260 ---------------------EE~AFW~Lv~iie~~lp~Yyt~nL~g~qvDQ~VL~~llre~lPkl~~~l~~~~~~~~l~ 318 (436)
T KOG2058|consen 260 ---------------------EEDAFWMLVALIENYLPRYYTPNLIGSQVDQKVLRELLREKLPKLSLHLEGNGVDASLE 318 (436)
T ss_pred ---------------------hHHHHHHHHHHHHHhchhhcCchhhhhhccHHHHHHHHHHHCHHHHHhhhhcCCCeeee
Confidence 999999999999997 6799999999999999999999999999999999999999999
Q ss_pred hhhHHHHHhccCCChhhHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHhccCCHHHHHHHHhCCCCC
Q psy3959 327 SFRWMNNLLTREVPLRCSIRLWDTYLAESDDFAAFQLYVCAAFLLHWRQKLLRERDFQGLMLMLQNLPTS 396 (431)
Q Consensus 327 ~~~W~~tlF~~~lp~~~~lRlWD~~l~eg~~~~~fl~~v~~AiL~~~r~~Ll~~~d~~~ll~~L~~lp~~ 396 (431)
++.||+++|+..+|.++++||||++|.||.+ +++++++|++...+++|+++.+..+++.+++.+...
T Consensus 319 t~~wfLt~f~d~lP~~t~LrIwD~~f~eGsk---vlfr~Alai~k~~ee~il~~~~~~~i~~~~~~~~~~ 385 (436)
T KOG2058|consen 319 TLPWFLTLFVDILPSETVLRIWDCLFYEGSK---VLFRVALAILKKHEEEILKEDSSKEILRVLPDLTKR 385 (436)
T ss_pred ehhhhHHHhcccccHHHHHHHHHHHHhcccH---HHHHHHHHHHHHhHHHHhcCCCHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999987 788999999999999999999999999999887664
No 4
>smart00164 TBC Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs. Widespread domain present in Gyp6 and Gyp7, thereby giving rise to the notion that it performs a GTP-activator activity on Rab-like GTPases.
Probab=100.00 E-value=9.9e-40 Score=301.65 Aligned_cols=193 Identities=32% Similarity=0.585 Sum_probs=170.9
Q ss_pred HCCCCCCcHHHHHHHhhCCCCCChHHHHHHHHHHHHHHHHHHHHHccCCCCchhHHHHHHHHHhcccCCcchhhhcch--
Q psy3959 127 WSGIPNQVRPDAWRLLAGYLPTSSERRQQVLERKRTEYWVFVKQYYDTDRDETYQDIYRQIHIDIPRMSPLMMLFQQK-- 204 (431)
Q Consensus 127 ~~GIP~~~R~~vW~~Llg~lp~~~~~~~~~l~~~~~~Y~~l~~~~~~~~~~~~~~~~~~qI~~Dv~Rt~p~~~~f~~~-- 204 (431)
++|||+++|+.+|+.++|+.+...+ ..+..|..+.++.... +.....+|++||+||+|++++|+.+
T Consensus 2 ~~Gip~~~R~~vW~~ll~~~~~~~~-------~~~~~Y~~l~~~~~~~-----~~~~~~~I~~Dv~Rt~~~~~~f~~~~~ 69 (199)
T smart00164 2 RKGVPPSLRGVVWKLLLNAQPMDTS-------ADKDLYSRLLKETAPK-----DKSIVHQIEKDLRRTFPEHSFFQDKEG 69 (199)
T ss_pred CCCCCHHHHHHHHHHHhCCchhhhc-------ccchHHHHHHHhhcCC-----ChhhHHHHhcccCCCCCCchhhcCCCc
Confidence 6799999999999999999654321 1367899998875432 1235689999999999999999853
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCCChhHHHHHHHHHHhhccCCCCCcccccccCCCchhhhhhhHHHHHHHHHHHHhhhh
Q psy3959 205 LVQEMFERILFIWAIRHPASGYVQGINDLVTPFFVVFLQEFLPVGTDLEQLDLSTLPKEQRDIIEADSFCCLSKFLDGIQ 284 (431)
Q Consensus 205 ~~~~~L~rIL~~~a~~~p~igY~QGm~~iva~ll~v~~~~~~~~~~~~~~~~~~~~~~e~~~~iE~daF~~l~~ll~~~~ 284 (431)
..++.|+|||.+|+.+||++||||||++||++|+.++.+ |++|||||+++|+...
T Consensus 70 ~~~~~L~~IL~~~~~~~p~~gY~QGm~~i~~~ll~~~~~-------------------------e~~af~~~~~l~~~~~ 124 (199)
T smart00164 70 PGQESLRRVLKAYALYNPEVGYCQGMNFLAAPLLLVMPD-------------------------EEDAFWCLVKLMERYG 124 (199)
T ss_pred ccHHHHHHHHHHHHHHCCCCceeccHHHHHHHHHHhcCC-------------------------HHHHHHHHHHHHHHhC
Confidence 588999999999999999999999999999999997754 9999999999999874
Q ss_pred -hhhccchhhHHHHHHHHHHHHHHhcHHHHHHHHH-cCCCcchhhhhHHHHHhccCCChhhHHHHHHHHhcCCC
Q psy3959 285 -DNYIFAQLGIQQKVNQLKDLIQRIDTNLHNHLLK-HGVDYLQFSFRWMNNLLTREVPLRCSIRLWDTYLAESD 356 (431)
Q Consensus 285 -~~f~~~~~~i~~~~~~l~~ll~~~dp~L~~hL~~-~~v~~~~f~~~W~~tlF~~~lp~~~~lRlWD~~l~eg~ 356 (431)
.+|..+.+++...+..++.+++.++|+||+||.+ .|+++..|+++|++++|++++|++.++||||.|+++|.
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~ll~~~~p~l~~~l~~~~~i~~~~~~~~W~~~lF~~~~~~~~~~riwD~~l~eG~ 198 (199)
T smart00164 125 PNFYLPDMSGLQLDLLQLDRLVKEYDPDLYKHLKDKLGIDPSLYALRWFLTLFARELPLEIVLRIWDVLFAEGS 198 (199)
T ss_pred cccCCCChHHHHHHHHHHHHHHHHHCHHHHHHHHHhcCCCchhHHHHHHHHHHHhhCCHHHHHHHHHHHHhcCC
Confidence 4477788899999999999999999999999996 99999999999999999999999999999999999985
No 5
>KOG2223|consensus
Probab=100.00 E-value=7.4e-38 Score=302.82 Aligned_cols=247 Identities=24% Similarity=0.411 Sum_probs=218.6
Q ss_pred CCHHHHHHHHHCCCCCCcHHHHHHHhhCC-CCCChHHHHHHHHHHHHH-HHHHHHHHccCCCCchhHHHHHHHHHhcccC
Q psy3959 117 LNLEELRSLAWSGIPNQVRPDAWRLLAGY-LPTSSERRQQVLERKRTE-YWVFVKQYYDTDRDETYQDIYRQIHIDIPRM 194 (431)
Q Consensus 117 ~d~~~L~~l~~~GIP~~~R~~vW~~Llg~-lp~~~~~~~~~l~~~~~~-Y~~l~~~~~~~~~~~~~~~~~~qI~~Dv~Rt 194 (431)
.+..+.+.+.|.|||+.+|+.||.+-.|. +....+-....+.+..+. ...+.++... +-+.......+|+.|+.||
T Consensus 289 ~~SrR~relWwQGiP~~VRGkvW~laIGNel~it~elfd~~la~Aker~ak~~aeq~~~--sa~~re~sv~~i~LDisrT 366 (586)
T KOG2223|consen 289 LKSRRVRELWWQGIPPSVRGKVWSLAIGNELNITYELFDIALARAKEREAKSLAEQMSN--SAADREASVELIKLDISRT 366 (586)
T ss_pred HhhHHHHHHHHccCChhhcchhhHhhhCcccccCHHHHHHHHHHHHHHHHHHHHhhccc--chhhhhcchhheeechhcc
Confidence 45688889999999999999999999995 555566666666665554 6777776532 1222345678999999999
Q ss_pred Ccchhhhcc-hHHHHHHHHHHHHHHHhCCCCCCCCChhHHHHHHHHHHhhccCCCCCcccccccCCCchhhhhhhHHHHH
Q psy3959 195 SPLMMLFQQ-KLVQEMFERILFIWAIRHPASGYVQGINDLVTPFFVVFLQEFLPVGTDLEQLDLSTLPKEQRDIIEADSF 273 (431)
Q Consensus 195 ~p~~~~f~~-~~~~~~L~rIL~~~a~~~p~igY~QGm~~iva~ll~v~~~~~~~~~~~~~~~~~~~~~~e~~~~iE~daF 273 (431)
||+..+|+. ....+.|..||.+|+.|.|++||+|||.+|+|++++.+. +++||
T Consensus 367 fpsl~iFqk~GPy~d~L~~lL~AYt~yRpDvgYVqgmSFIaAvLllnmd--------------------------~~~AF 420 (586)
T KOG2223|consen 367 FPSLSIFQKGGPYHDDLHSLLGAYTCYRPDVGYVQGMSFIAAVLLLNMD--------------------------LADAF 420 (586)
T ss_pred CcceeeeccCCchHHHHHHHhhhheeecCccccccchHHHHHHHHHcCC--------------------------cHHHH
Confidence 999999984 357788999999999999999999999999999987655 89999
Q ss_pred HHHHHHHhhh--hhhhccchhhHHHHHHHHHHHHHHhcHHHHHHHHHcCCCcchhhhhHHHHHhccCCChhhHHHHHHHH
Q psy3959 274 CCLSKFLDGI--QDNYIFAQLGIQQKVNQLKDLIQRIDTNLHNHLLKHGVDYLQFSFRWMNNLLTREVPLRCSIRLWDTY 351 (431)
Q Consensus 274 ~~l~~ll~~~--~~~f~~~~~~i~~~~~~l~~ll~~~dp~L~~hL~~~~v~~~~f~~~W~~tlF~~~lp~~~~lRlWD~~ 351 (431)
.||.+|+++- +.+|..+.+.+...+..|+..+++..|+|+.||.++.+.|..|.+.|+.++|+..+|++.++||||+|
T Consensus 421 iafANLLdkp~q~Aff~~d~s~m~~yf~tfe~~leenlp~L~~Hl~kl~l~PDiylidwiftlyskslpldlacRIwDvy 500 (586)
T KOG2223|consen 421 IAFANLLDKPCQQAFFRVDHSSMLSYFATFEVFLEENLPKLFTHLKKLELTPDIYLIDWIFTLYSKSLPLDLACRIWDVY 500 (586)
T ss_pred HHHHHHhccHHHHHHHhcCcHHHHHHHHHHHHHHHhccHHHHHHHHhccCCCchhhHHHHHHHHhccCChHHhhhhhhee
Confidence 9999999984 78899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCCchhHHHHHHHHHHHHHHHHHhccCCHHHHHHHHhCCCC
Q psy3959 352 LAESDDFAAFQLYVCAAFLLHWRQKLLRERDFQGLMLMLQNLPT 395 (431)
Q Consensus 352 l~eg~~~~~fl~~v~~AiL~~~r~~Ll~~~d~~~ll~~L~~lp~ 395 (431)
+-+|+. |++..+++||..++..|+ .+||..+.+||..+|.
T Consensus 501 ~rdgee---Flfr~~lgIlklyepkLl-~mDf~~~~qfLtklp~ 540 (586)
T KOG2223|consen 501 CRDGEE---FLFRTALGILKLYEPKLL-VMDFIHVAQFLTKLPE 540 (586)
T ss_pred eecchH---HHHHHHHHHHHHccchHh-hhhHHHHHHHHHhCcc
Confidence 999998 889999999999999998 6999999999999987
No 6
>COG5210 GTPase-activating protein [General function prediction only]
Probab=100.00 E-value=2e-37 Score=323.55 Aligned_cols=248 Identities=32% Similarity=0.566 Sum_probs=209.1
Q ss_pred HHHHHHHhccC-----CCCHHHHHHHHHCCCCCCcHHHHHHHhhCCCCCChHHHHHHHHHHHHHHHHHHHHHccCCCCch
Q psy3959 105 IAKFNALLNLN-----LLNLEELRSLAWSGIPNQVRPDAWRLLAGYLPTSSERRQQVLERKRTEYWVFVKQYYDTDRDET 179 (431)
Q Consensus 105 ~~k~~~ll~~~-----~~d~~~L~~l~~~GIP~~~R~~vW~~Llg~lp~~~~~~~~~l~~~~~~Y~~l~~~~~~~~~~~~ 179 (431)
...|.+.+... .....+++.+++.|||..+|+.+|..++|+.+. .......|..+..........
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~gip~~~r~~vw~~~~~~~~~--------~~~~~~~y~~~~~~~~~~~~~-- 252 (496)
T COG5210 183 DKLWISYLDPNPLSFLPVQLSKLRELIRKGIPNELRGDVWEFLLGIGFD--------LDKNPGLYERLLNLHREAKIP-- 252 (496)
T ss_pred HHHHHHHHhcccchhhhhhHHHHHHHHHhcCChHhhhhhHHHHhccchh--------hccCchHHHHHHHHHHhcCCC--
Confidence 34455555432 346799999999999999999999999998543 333445666665543222111
Q ss_pred hHHHHHHHHHhcccCCcchhhhcchHHHHH--HHHHHHHHHHhCCCCCCCCChhHHHHHHHHHHhhccCCCCCccccccc
Q psy3959 180 YQDIYRQIHIDIPRMSPLMMLFQQKLVQEM--FERILFIWAIRHPASGYVQGINDLVTPFFVVFLQEFLPVGTDLEQLDL 257 (431)
Q Consensus 180 ~~~~~~qI~~Dv~Rt~p~~~~f~~~~~~~~--L~rIL~~~a~~~p~igY~QGm~~iva~ll~v~~~~~~~~~~~~~~~~~ 257 (431)
.....++|++||.||+|.+..|+.+..+.. |+|||.+|+.+||++|||||||+|+|+|++++..
T Consensus 253 ~~~~~~~i~~Dl~rt~~~~~~f~~~~s~~~~~L~rvL~ays~~~p~vgY~QgMn~l~a~ll~~~~~-------------- 318 (496)
T COG5210 253 TQEIISQIEKDLSRTFPDNSLFQTEISIRAENLRRVLKAYSLYNPEVGYVQGMNFLAAPLLLVLES-------------- 318 (496)
T ss_pred cHHHHHHHHccccccccccccccCcccccHHHHHHHHHHHHhcCCCCceeccHHHHHHHHHHHhhh--------------
Confidence 115789999999999999999997766555 9999999999999999999999999999999886
Q ss_pred CCCchhhhhhhHHHHHHHHHHHHh--hhhhhhccchhhHHHHHHHHHHHHHHhcHHHHHHHHHcCCCcchhhhhHHHHHh
Q psy3959 258 STLPKEQRDIIEADSFCCLSKFLD--GIQDNYIFAQLGIQQKVNQLKDLIQRIDTNLHNHLLKHGVDYLQFSFRWMNNLL 335 (431)
Q Consensus 258 ~~~~~e~~~~iE~daF~~l~~ll~--~~~~~f~~~~~~i~~~~~~l~~ll~~~dp~L~~hL~~~~v~~~~f~~~W~~tlF 335 (431)
|++||||+++||. .++++|..++.|+...+..+..+++..+|+||.||.+.|+...+|+++||+++|
T Consensus 319 -----------Ee~AF~~l~~L~~~~~l~~~~~~~~~G~~~~~~~l~~~v~~~~p~l~~hl~~~~~~~~~~~~~w~l~lF 387 (496)
T COG5210 319 -----------EEQAFWCLVKLLKNYGLPGYFLKNLSGLHRDLKVLDDLVEELDPELYEHLLREGVVLLMFAFRWFLTLF 387 (496)
T ss_pred -----------hHHHHHHHHHHHHhccchhhcccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhhhhHHHHHHHH
Confidence 9999999999999 479999999999999999999999999999999999999999999999999999
Q ss_pred ccCCChhhHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHhccCCHHHHHHHH
Q psy3959 336 TREVPLRCSIRLWDTYLAESDDFAAFQLYVCAAFLLHWRQKLLRERDFQGLMLML 390 (431)
Q Consensus 336 ~~~lp~~~~lRlWD~~l~eg~~~~~fl~~v~~AiL~~~r~~Ll~~~d~~~ll~~L 390 (431)
++++|++.++||||++|++|.. +++.+++|++...+.+++...+-..+..++
T Consensus 388 ~~~~p~e~~lriwD~lf~eg~~---~l~~~~~~~l~~~~~~l~~~~~~~~~~~~~ 439 (496)
T COG5210 388 VREFPLEYALRIWDCLFLEGSS---MLFQLALAILKLLRDKLLKLDSDELLDLLL 439 (496)
T ss_pred HhcCCHHHHHHHHHHHHHhccH---HHHHHHHHHHHhhhhhhhccCchhHHHHHH
Confidence 9999999999999999999987 678899999999999988654444333333
No 7
>PF00566 RabGAP-TBC: Rab-GTPase-TBC domain; InterPro: IPR000195 Identification of a TBC domain in GYP6_YEAST and GYP7_YEAST, which are GTPase activator proteins of yeast Ypt6 and Ypt7, imply that these domains are GTPase activator proteins of Rab-like small GTPases [].; GO: 0005097 Rab GTPase activator activity, 0032313 regulation of Rab GTPase activity, 0005622 intracellular; PDB: 2G77_A 1FKM_A 3HZJ_A 3QYE_A 2QFZ_A 3QYB_A 2QQ8_A 3DZX_A 3QWL_A.
Probab=100.00 E-value=9.2e-36 Score=277.41 Aligned_cols=213 Identities=31% Similarity=0.570 Sum_probs=172.5
Q ss_pred CCcHHHHHHHhhCCCCCChHHHHHHHHHHHHHHHHHHHHHccCCCCchhHHHHHHHHHhcccCCcchhhhcchHHHHHHH
Q psy3959 132 NQVRPDAWRLLAGYLPTSSERRQQVLERKRTEYWVFVKQYYDTDRDETYQDIYRQIHIDIPRMSPLMMLFQQKLVQEMFE 211 (431)
Q Consensus 132 ~~~R~~vW~~Llg~lp~~~~~~~~~l~~~~~~Y~~l~~~~~~~~~~~~~~~~~~qI~~Dv~Rt~p~~~~f~~~~~~~~L~ 211 (431)
+++|+.+|+.|+|+.| .... .........+........ ....+.+..++|++||.||+++...+..+.+++.|+
T Consensus 1 ~~~R~~vW~~ll~~~~--~~~~-~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~I~~Dv~rt~~~~~~~~~~~~~~~l~ 74 (214)
T PF00566_consen 1 HSLRGQVWKILLGIEP--NYSN-NYQDEKNQWEQIESKSSN---SNKLDNKIFEQIDKDVNRTFPNSFLFKNEQNQKSLE 74 (214)
T ss_dssp -CCHHHHHHHHCTCSC--HHHH-HHHHHHHHHHHHHHHHHH---CTSTCHTCHHHHHHHHCTSSTSCCCSTTHHHHHHHH
T ss_pred CChHHHHHHHHHccch--hhhh-hHHHHhhhhhhhhHHHHH---hccccchHHHHHHHhhhhhcccchhhhhcchHHHHH
Confidence 4789999999999866 1000 000111111111111111 222334557999999999999777788889999999
Q ss_pred HHHHHHHHhCCCCCCCCChhHHHHHHHHHHhhccCCCCCcccccccCCCchhhhhhhHHHHHHHHHHHH-hhhhhhhccc
Q psy3959 212 RILFIWAIRHPASGYVQGINDLVTPFFVVFLQEFLPVGTDLEQLDLSTLPKEQRDIIEADSFCCLSKFL-DGIQDNYIFA 290 (431)
Q Consensus 212 rIL~~~a~~~p~igY~QGm~~iva~ll~v~~~~~~~~~~~~~~~~~~~~~~e~~~~iE~daF~~l~~ll-~~~~~~f~~~ 290 (431)
+||.+|+.++|++||||||++|+++++.++.+ |++||||+++++ ....++|..+
T Consensus 75 ~iL~~~~~~~~~~~Y~qG~~~i~~~ll~~~~~-------------------------e~~af~~~~~l~~~~~~~~~~~~ 129 (214)
T PF00566_consen 75 RILSAYAKYNPDVGYCQGMNDIAAPLLLVFLD-------------------------EEEAFWCFVQLLNYYLPDFFQPN 129 (214)
T ss_dssp HHHHHHHHHTTTTSS-TTHHHHHHHHHHTCSH-------------------------HHHHHHHHHHHHTHHGGGGTSTT
T ss_pred HHHHHhccccccccccchhhhhhhhhhhhccc-------------------------ccchhccccchhccccccccccc
Confidence 99999999999999999999999999976665 889999999999 5568999999
Q ss_pred hhhHHHHHHHHHHHHHHhcHHHHHHHHHcCCCcchhhhhHHHHHhccCCChhhHHHHHHHHhcCCCCchhHHHHHHHHHH
Q psy3959 291 QLGIQQKVNQLKDLIQRIDTNLHNHLLKHGVDYLQFSFRWMNNLLTREVPLRCSIRLWDTYLAESDDFAAFQLYVCAAFL 370 (431)
Q Consensus 291 ~~~i~~~~~~l~~ll~~~dp~L~~hL~~~~v~~~~f~~~W~~tlF~~~lp~~~~lRlWD~~l~eg~~~~~fl~~v~~AiL 370 (431)
.++++..+..++.+++.++|+|+.||++.|+++..|+++|+.++|++++|.+.++|||| ++.+|.++ +++++|+|++
T Consensus 130 ~~~~~~~~~~~~~ll~~~~P~l~~~l~~~~~~~~~~~~~w~~~lF~~~l~~~~~~~lwD-~l~~g~~~--~l~~~~lail 206 (214)
T PF00566_consen 130 FKGLQKILKIFEQLLKKHDPELYNHLKQLGVDPEIYAFPWFLTLFSRSLPFDDVLRLWD-FLLEGYKF--FLFFIALAIL 206 (214)
T ss_dssp HHHHHHHHHHHHHHHHHHTHHHHHHHHHTT-GGHHHHHHHHHTTTTTTS-HHHHHHHHH-HHHHCTTH--HHHHHHHHHH
T ss_pred ccccchhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhHhhcCCcCCHHHHHHHHH-HHHcCCCc--HHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999 77788863 4899999999
Q ss_pred HHHHHHHh
Q psy3959 371 LHWRQKLL 378 (431)
Q Consensus 371 ~~~r~~Ll 378 (431)
...|++||
T Consensus 207 ~~~~~~il 214 (214)
T PF00566_consen 207 KYLRDQIL 214 (214)
T ss_dssp HHTHHHHH
T ss_pred HHHHHHhC
Confidence 99999986
No 8
>KOG1093|consensus
Probab=100.00 E-value=2.2e-33 Score=280.18 Aligned_cols=264 Identities=24% Similarity=0.427 Sum_probs=232.7
Q ss_pred HHHHHHHhccCCCCHHHHHHHHHCCCCCCcHHHHHHHhhCCCCCChHHHHHHHHHHHHHHHHHHHHHccCCCCchhHHHH
Q psy3959 105 IAKFNALLNLNLLNLEELRSLAWSGIPNQVRPDAWRLLAGYLPTSSERRQQVLERKRTEYWVFVKQYYDTDRDETYQDIY 184 (431)
Q Consensus 105 ~~k~~~ll~~~~~d~~~L~~l~~~GIP~~~R~~vW~~Llg~lp~~~~~~~~~l~~~~~~Y~~l~~~~~~~~~~~~~~~~~ 184 (431)
..++..++++.+.....+.+..+.|+|+.+|+.+|..||++ +.+.. ..|. ++.+ .+...+.
T Consensus 331 ~~~~d~Ll~g~~~k~~qI~r~a~vdvpp~~R~~iW~aLL~l-~e~~~----------a~y~-~IDk-------~Ts~~td 391 (725)
T KOG1093|consen 331 MLLFDRLLDGYPKKRLQILREAYVDVPPLYRGFIWAALLQL-EENHT----------AFYT-LIDK-------GTSHSTD 391 (725)
T ss_pred HHHHHHhhccchHHHHHHHHHhccCCChhHhHHHHHHHhcC-ccccc----------hhhh-hhhc-------CCCCcch
Confidence 56788899997777888888899999999999999999986 22211 1222 2222 2233566
Q ss_pred HHHHHhcccCCcchhhhcchHHHHHHHHHHHHHHHhCCCCCCCCChhHHHHHHHHHHhhccCCCCCcccccccCCCchhh
Q psy3959 185 RQIHIDIPRMSPLMMLFQQKLVQEMFERILFIWAIRHPASGYVQGINDLVTPFFVVFLQEFLPVGTDLEQLDLSTLPKEQ 264 (431)
Q Consensus 185 ~qI~~Dv~Rt~p~~~~f~~~~~~~~L~rIL~~~a~~~p~igY~QGm~~iva~ll~v~~~~~~~~~~~~~~~~~~~~~~e~ 264 (431)
+||+.||+|+.....+...+.+++.|+|+|.+|+..||..-|.||+..+++||+..+.+.
T Consensus 392 rqievdiprchQyd~~lsSp~~~r~lrRvLkawv~~s~~fvywqgldsLa~PFl~ln~Nn-------------------- 451 (725)
T KOG1093|consen 392 RQIEVDIPRCHQYDELLSSPKGHRKLRRVLKAWVTWSPIFVYWQGLDSLAAPFLYLNFNN-------------------- 451 (725)
T ss_pred hhhhcccchhhhcccccCCHHHHHHHHHHHHHHHhcCcceeecCCChhhhhhHHHHhcCc--------------------
Confidence 999999999999888888999999999999999999999999999999999999988775
Q ss_pred hhhhHHHHHHHHHHHHhhh-hhhhcc-chhhHHHHHHHHHHHHHHhcHHHHHHHHHcCCCcchhhhhHHHHHhccCCChh
Q psy3959 265 RDIIEADSFCCLSKFLDGI-QDNYIF-AQLGIQQKVNQLKDLIQRIDTNLHNHLLKHGVDYLQFSFRWMNNLLTREVPLR 342 (431)
Q Consensus 265 ~~~iE~daF~~l~~ll~~~-~~~f~~-~~~~i~~~~~~l~~ll~~~dp~L~~hL~~~~v~~~~f~~~W~~tlF~~~lp~~ 342 (431)
|+.||-|+..++-++ +.+|.. +...++..+.+|.+++..+||+|++||..+|+.++.||++||+|+|+++||++
T Consensus 452 ----e~laF~~~~~fi~kycq~fflkdns~vikeyLs~f~~l~AfhDpeL~qHl~~~~f~~eLyAiPwflT~Fshvlpl~ 527 (725)
T KOG1093|consen 452 ----ELLAFACIATFIPKYCQHFFLKDNSNVIKEYLSMFSQLLAFHDPELLQHLIDIGFIPELYAIPWFLTMFSHVLPLH 527 (725)
T ss_pred ----hHHHHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhcCHHHHHHHHHcCCcHHHHHHHHHHHHHHhhccHH
Confidence 999999999999886 778877 45678999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHhccCCHHHHHHHHhCCCCCCCCcccHHHHHHHHHHHHHHhccc
Q psy3959 343 CSIRLWDTYLAESDDFAAFQLYVCAAFLLHWRQKLLRERDFQGLMLMLQNLPTSNWSDHDIGVLVAEAYRLKVAFADA 420 (431)
Q Consensus 343 ~~lRlWD~~l~eg~~~~~fl~~v~~AiL~~~r~~Ll~~~d~~~ll~~L~~lp~~~~~~~di~~Ll~~A~~L~~~~~~a 420 (431)
.++.+||.++..+.. |.+++++|++...|+.|| ..+|.|.+.++.++|.. ||+.++++++.|..+.|..
T Consensus 528 kil~LwD~lml~~~S---Fplmi~vAil~~lR~~LL-a~nfne~illf~d~pdl-----dId~~Ires~~l~e~tP~s 596 (725)
T KOG1093|consen 528 KILHLWDNLMLGHSS---FPLMIGVAILIQLRDPLL-ACNFNECILLFSDLPDL-----DIDVCIRESYHLMETTPKS 596 (725)
T ss_pred HHHHHHHHHhcCCCc---cHHHHHHHHHHHhhhhhh-hCCchhheeeeccCCcc-----cHHHHHHHHhhhhhCCCCC
Confidence 999999999999987 789999999999999999 58999999999999965 9999999999998777654
No 9
>KOG1091|consensus
Probab=99.97 E-value=2.9e-31 Score=265.17 Aligned_cols=284 Identities=25% Similarity=0.403 Sum_probs=223.5
Q ss_pred CCcHHHHHHHhhCCCCCChHHHHHHHHHHHHHHHHHHHHHccCCCCc--------------------------hhHHHHH
Q psy3959 132 NQVRPDAWRLLAGYLPTSSERRQQVLERKRTEYWVFVKQYYDTDRDE--------------------------TYQDIYR 185 (431)
Q Consensus 132 ~~~R~~vW~~Llg~lp~~~~~~~~~l~~~~~~Y~~l~~~~~~~~~~~--------------------------~~~~~~~ 185 (431)
...|+..|+++||++|.+...|...+.+.+..|..+.+.+...+... .+.+...
T Consensus 27 s~~Rgv~Wrl~L~vLp~~~ss~id~~~~~ra~~r~~r~~~L~dPh~~k~~~s~d~~idnPLSq~~~S~W~rfF~d~EL~~ 106 (625)
T KOG1091|consen 27 SNLRGVRWRLLLGVLPSENSSWIDNLRRLRANYRRLRRRLLIDPHNLKENHSPDLPIDNPLSQNPQSVWNRFFRDAELEK 106 (625)
T ss_pred hhhhhHHHHHhheecCCCchhHHHHHHHHhhhhhccccccccCccccccccCCCcccCCccccCCCchhhhhcCcHHHHH
Confidence 36899999999999999988999999999999999866553322110 1467788
Q ss_pred HHHHhcccCCcch-hhhcchHHHHHHHHHHHHHHHhCCCCCCCCChhHHHHHHHHHHhhccCCCCCcccc-cccCCCchh
Q psy3959 186 QIHIDIPRMSPLM-MLFQQKLVQEMFERILFIWAIRHPASGYVQGINDLVTPFFVVFLQEFLPVGTDLEQ-LDLSTLPKE 263 (431)
Q Consensus 186 qI~~Dv~Rt~p~~-~~f~~~~~~~~L~rIL~~~a~~~p~igY~QGm~~iva~ll~v~~~~~~~~~~~~~~-~~~~~~~~e 263 (431)
.|..||.||||.+ .+|+++..+.+|++||.+||.-||.+||-|||+++.||+++|...+....-..-+. ++-...-+.
T Consensus 107 ~i~qDvsRtfPe~~~fFqs~~~q~mLr~iLl~~~lehp~i~YrQGMHElLAPl~fVl~~D~q~l~h~se~~~~~l~f~E~ 186 (625)
T KOG1091|consen 107 TIDQDVSRTFPEHSLFFQSPEVQGMLRRILLLYALEHPEIGYRQGMHELLAPLLFVLHVDNQALLHVSESLFDKLGFEER 186 (625)
T ss_pred hhcchhhccCcchhhhhcCchhhHHHHHHHHHHHhhchhhhHHhhhhhhhhhhhhheehhHHHHHHHHHhhhhhcCcchh
Confidence 9999999999999 99999999999999999999999999999999999999999876542210000000 000000000
Q ss_pred ----hhhhhHHHHH--HHHHHHHhhh------------------------hhhhccchhhHHHHHHHHHHHHHHhcHHHH
Q psy3959 264 ----QRDIIEADSF--CCLSKFLDGI------------------------QDNYIFAQLGIQQKVNQLKDLIQRIDTNLH 313 (431)
Q Consensus 264 ----~~~~iE~daF--~~l~~ll~~~------------------------~~~f~~~~~~i~~~~~~l~~ll~~~dp~L~ 313 (431)
...+.+.+.+ -+++.+|..- -+.+.++.+.+......+.+++..+|+.||
T Consensus 187 d~iy~~~y~k~d~dn~~lqs~lmls~~~~~e~e~g~~~~e~~ie~day~~~d~l~~~l~~v~e~~~~~~~lL~~~D~~Lh 266 (625)
T KOG1091|consen 187 DVIYNFLYLKTDLDNTELQSVLMLSDEYGYEEELGIVLSEKLIEHDAYVMFDALMPGLPPVFEANFAQYHLLAKVDKSLH 266 (625)
T ss_pred hhhhhHHHHhhhccchhHHHHHHhhhccccccCcceecCcccCCcCcccchhhhcccchhHHHHhhhhhhhhhhccHHHH
Confidence 1133455555 3555555321 112223455667777888999999999999
Q ss_pred HHHHHcCCCcchhhhhHHHHHhccCCChhhHHHHHH-HHhcCCCCchhHHHHHHHHHHHHHHHHHhccCCHHHHHHHHhC
Q psy3959 314 NHLLKHGVDYLQFSFRWMNNLLTREVPLRCSIRLWD-TYLAESDDFAAFQLYVCAAFLLHWRQKLLRERDFQGLMLMLQN 392 (431)
Q Consensus 314 ~hL~~~~v~~~~f~~~W~~tlF~~~lp~~~~lRlWD-~~l~eg~~~~~fl~~v~~AiL~~~r~~Ll~~~d~~~ll~~L~~ 392 (431)
.||.+.||+|++|.+||+..||.|+||+..++-+|| +.+++++.. .++-|+.+|+|++.|+.|+ ..+.++.+++|.+
T Consensus 267 ~HL~~l~i~pqifgiRWlRlLFGREfpL~dLLiVWD~~l~~d~pr~-~Lv~~m~VsmLL~IRd~Ll-ss~~~tcL~~Lm~ 344 (625)
T KOG1091|consen 267 SHLVELGIEPQIFGIRWLRLLFGREFPLQDLLIVWDHVLIFDSPRG-ILVACMFVSMLLYIRDSLL-SSEYQTCLQYLMN 344 (625)
T ss_pred HHHHhcCCchHHHHHHHHHHHHcchhHHHHHHHHhhhhhhccCchH-HHHHHHHHHHHHHHHHHHH-HhcchhHHHHHhc
Confidence 999999999999999999999999999999999999 777777663 4888999999999999999 5888889999999
Q ss_pred CCCCCCCcccHHHHHHHHHHHHHHhcccc
Q psy3959 393 LPTSNWSDHDIGVLVAEAYRLKVAFADAP 421 (431)
Q Consensus 393 lp~~~~~~~di~~Ll~~A~~L~~~~~~a~ 421 (431)
+|.. .|++.+|..|.-++..|+-.+
T Consensus 345 yP~~----~Dv~~~iekAl~l~~~~~K~n 369 (625)
T KOG1091|consen 345 YPEI----IDVDKFIEKALHLQKLFPKSN 369 (625)
T ss_pred CCCc----CcHHHHHHHHHHHHHhccccc
Confidence 9985 599999999999998777633
No 10
>KOG2222|consensus
Probab=99.97 E-value=3.1e-30 Score=252.11 Aligned_cols=261 Identities=22% Similarity=0.339 Sum_probs=221.1
Q ss_pred HHHHhccCCCCHHHHHHHHHC-CCCCCcHHHHHHHhhCCCCCChHHHHHHHHHHHHHHHHHHHHHccCCCCchhHHHHHH
Q psy3959 108 FNALLNLNLLNLEELRSLAWS-GIPNQVRPDAWRLLAGYLPTSSERRQQVLERKRTEYWVFVKQYYDTDRDETYQDIYRQ 186 (431)
Q Consensus 108 ~~~ll~~~~~d~~~L~~l~~~-GIP~~~R~~vW~~Llg~lp~~~~~~~~~l~~~~~~Y~~l~~~~~~~~~~~~~~~~~~q 186 (431)
|.-+ .+.....++++.+++. |||+.+|+..|+.|+|.+ +........|...+++.-.. ...+-.|
T Consensus 149 w~hi-~~~~~ktdk~~~llkeggiphslr~~lw~rlsga~--------~kkk~ae~sy~~ilk~~and-----k~~~~~q 214 (848)
T KOG2222|consen 149 WEHI-DGMELKTDKFEELLKEGGIPHSLRAFLWMRLSGAL--------AKKKDAETSYEDILKACAND-----KLMIGKQ 214 (848)
T ss_pred HHhh-cccccchHHHHHHHHcCCCCcchhHHHHHHhhhhh--------hhhccccccHHHHHHHhccc-----ccchhHH
Confidence 4443 3555667999999886 699999999999999973 23333445788887774321 1345689
Q ss_pred HHHhcccCCcchhhhcch--HHHHHHHHHHHHHHHhCCCCCCCCChhHHHHHHHHHHhhccCCCCCcccccccCCCchhh
Q psy3959 187 IHIDIPRMSPLMMLFQQK--LVQEMFERILFIWAIRHPASGYVQGINDLVTPFFVVFLQEFLPVGTDLEQLDLSTLPKEQ 264 (431)
Q Consensus 187 I~~Dv~Rt~p~~~~f~~~--~~~~~L~rIL~~~a~~~p~igY~QGm~~iva~ll~v~~~~~~~~~~~~~~~~~~~~~~e~ 264 (431)
|++|+-|+.|++.+|.++ .+.+.|+|||.+.|...|++||||||.-|||.+++.+.
T Consensus 215 iekdllr~lpnn~cf~k~n~~gi~~lrrilk~ia~ifpdigycqg~gviva~lllf~~---------------------- 272 (848)
T KOG2222|consen 215 IEKDLLRILPNNACFSKKNGEGIEALRRILKCIAFIFPDIGYCQGMGVIVACLLLFCE---------------------- 272 (848)
T ss_pred HHHHHHHhCCCcceeeCCCCcchHHHHHHHhhheeecCCcccccCccHHHHHHHHHhc----------------------
Confidence 999999999999999854 57789999999999999999999999999999887544
Q ss_pred hhhhHHHHHHHHHHHHhhh--hhhhccchhhHHHHHHHHHHHHHHhcHHHHHHHHHcCCCcchhhhhHHHHHhccCCChh
Q psy3959 265 RDIIEADSFCCLSKFLDGI--QDNYIFAQLGIQQKVNQLKDLIQRIDTNLHNHLLKHGVDYLQFSFRWMNNLLTREVPLR 342 (431)
Q Consensus 265 ~~~iE~daF~~l~~ll~~~--~~~f~~~~~~i~~~~~~l~~ll~~~dp~L~~hL~~~~v~~~~f~~~W~~tlF~~~lp~~ 342 (431)
|+.+||++..+++.+ ..+|+.+..|+|....+...++.-+.|.|-+.|..+.|+....+..||+|+|...+...
T Consensus 273 ----ee~afwmmaaiiedilp~nfysqtllgiqaderv~~~li~~~l~~ldeal~~~dielslitl~w~ltlf~nv~~~k 348 (848)
T KOG2222|consen 273 ----EENAFWMMAAIIEDILPANFYSQTLLGIQADERVMHHLIACHLPDLDEALEDHDIELSLITLHWFLTLFANVFHMK 348 (848)
T ss_pred ----chhHHHHHHHHHHHhcCchhhhhhHhccchhHHHHHHHHHhccCchhHHHHhccceeeehHHHHHHHHHHHHHHHH
Confidence 899999999999997 57888899999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHhcc----CCHHHHHHHHhCCCCCCCCcccHHHHHHHHHHHH
Q psy3959 343 CSIRLWDTYLAESDDFAAFQLYVCAAFLLHWRQKLLRE----RDFQGLMLMLQNLPTSNWSDHDIGVLVAEAYRLK 414 (431)
Q Consensus 343 ~~lRlWD~~l~eg~~~~~fl~~v~~AiL~~~r~~Ll~~----~d~~~ll~~L~~lp~~~~~~~di~~Ll~~A~~L~ 414 (431)
..+||||.||.+|.- .++.+.++||+.-+.+|... .+..++...|..+|.. -.|++.++..|.+.-
T Consensus 349 illriwd~~fy~g~i---~ifql~i~ilkmkeqdi~~iaettensa~if~als~ip~~---vtdve~l~~~~~~~~ 418 (848)
T KOG2222|consen 349 ILLRIWDFFFYEGGI---NIFQLIIGILKMKEQDIKEIAETTENSADIFNALSDIPAE---VTDVEKLFEQAGEFE 418 (848)
T ss_pred HHHHHHHhheecCcc---hhHHHHHHHHHhhHHHHHHHHHhcccHHHHHHHHHhCCch---hhhHHHHHHHHhhcc
Confidence 999999999999853 56789999999887777654 6778899999999985 458888888876653
No 11
>KOG4347|consensus
Probab=99.97 E-value=1e-30 Score=265.53 Aligned_cols=272 Identities=23% Similarity=0.306 Sum_probs=235.8
Q ss_pred hhhHHHHHHHHHHhcc--CCCC---HHHHHHHHHCCCCCCcHHHHHHHhhCCCCCChHHHHHHHHHHHHHHHHHHHHHcc
Q psy3959 99 ESESSKIAKFNALLNL--NLLN---LEELRSLAWSGIPNQVRPDAWRLLAGYLPTSSERRQQVLERKRTEYWVFVKQYYD 173 (431)
Q Consensus 99 ~~e~~r~~k~~~ll~~--~~~d---~~~L~~l~~~GIP~~~R~~vW~~Llg~lp~~~~~~~~~l~~~~~~Y~~l~~~~~~ 173 (431)
.+|+.+...|++-+.. +..+ ..+++++++.|||...|+.+|-+++|. ...+..+.++|..+++....
T Consensus 167 lre~~k~k~W~~~f~~~G~~~~~~qt~~~~Klv~~gipe~~rgeiW~l~sGa--------v~~~l~~~Geygkll~~~~G 238 (671)
T KOG4347|consen 167 LREWAKEKFWKKYFIKDGPNMNQIQTILLRKLLYNGFPEDPRGEIWYLASGA--------VASLLLNPGEYGKLLHSVTG 238 (671)
T ss_pred HHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhcCCChHHHHHHhhhHH--------HHHhhcCcHHhhhhhhcccC
Confidence 3788888888887754 4444 378899999999999999999999997 45667788999999988655
Q ss_pred CCCCchhHHHHHHHHHhcccCCcchhhhcchHHHHHHHHHHHHHHHhCCCCCCCCChhHHHHHHHHHHhhccCCCCCccc
Q psy3959 174 TDRDETYQDIYRQIHIDIPRMSPLMMLFQQKLVQEMFERILFIWAIRHPASGYVQGINDLVTPFFVVFLQEFLPVGTDLE 253 (431)
Q Consensus 174 ~~~~~~~~~~~~qI~~Dv~Rt~p~~~~f~~~~~~~~L~rIL~~~a~~~p~igY~QGm~~iva~ll~v~~~~~~~~~~~~~ 253 (431)
.. .-....|+.|++|..|+++-|+.+.+...|+|||.+||..||+|||||-||-+++.+++...
T Consensus 239 ~~-----~~a~eEIE~Dl~rsLpEhpA~Q~e~gi~aLR~vL~Aya~~Np~vGYcQaMNIV~s~lll~~~----------- 302 (671)
T KOG4347|consen 239 KR-----SVATEEIEPDLGRSLPEHPAFQSEPGIAALRRVLTAYAWSNPEVGYCQAMNIVGSELLLFCK----------- 302 (671)
T ss_pred Cc-----ccccccccCCCCCCCCcchhhhCCCchhhHHHHHHhhhccCCchhHHHHHHHHHHhhhhhhc-----------
Confidence 22 22346799999999999999999999999999999999999999999999988888776444
Q ss_pred ccccCCCchhhhhhhHHHHHHHHHHHHhhh-hhhhccchhhHHHHHHHHHHHHHHhcHHHHHHHHHcCCCcchhhhhHHH
Q psy3959 254 QLDLSTLPKEQRDIIEADSFCCLSKFLDGI-QDNYIFAQLGIQQKVNQLKDLIQRIDTNLHNHLLKHGVDYLQFSFRWMN 332 (431)
Q Consensus 254 ~~~~~~~~~e~~~~iE~daF~~l~~ll~~~-~~~f~~~~~~i~~~~~~l~~ll~~~dp~L~~hL~~~~v~~~~f~~~W~~ 332 (431)
|+.+||+++++.+.+ .++|....-|....+.+++++++...|.||.|+..+| ........||+
T Consensus 303 ---------------EEeafwll~~lce~~ip~yys~~vvGtliDQ~vfe~lve~~lP~l~~~~~~l~-~l~~Vsl~WFl 366 (671)
T KOG4347|consen 303 ---------------EEEAFWLLSKLCEIYIPDYYSKTVVGTLIDQSVFEELVEDTLPVLGEHLAVLG-QLSTVSLSWFL 366 (671)
T ss_pred ---------------cchHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHhhhHHHHHhhhhc-ccceEeeHHHH
Confidence 899999999999985 8999999999999999999999999999999999999 66779999999
Q ss_pred HHhccCCChhhHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHhccCCHHHHHHHHhCCCCCC------------CCc
Q psy3959 333 NLLTREVPLRCSIRLWDTYLAESDDFAAFQLYVCAAFLLHWRQKLLRERDFQGLMLMLQNLPTSN------------WSD 400 (431)
Q Consensus 333 tlF~~~lp~~~~lRlWD~~l~eg~~~~~fl~~v~~AiL~~~r~~Ll~~~d~~~ll~~L~~lp~~~------------~~~ 400 (431)
++|...+|++..+||.|+|+.+|.. +++-+++|++..+.+.|+.+.|-.++|..|+++...- -..
T Consensus 367 slFls~m~le~a~~ilD~FF~eG~r---vlFqiaLail~~N~~~il~~~dDge~~~vl~~y~~~i~~~~~~~~~~~~~~~ 443 (671)
T KOG4347|consen 367 SLFLSLMPLEYAVRILDCFFYEGPR---VLFQIALAILKQNAERILSATDDGEAMMVLGNYFDSIYNGDYPDESDHASDS 443 (671)
T ss_pred HHHHHHcchHHHHHHHhhhhhcccH---HHHHHHHHHHHhhHHHhcccCCchHHHHHHHHHHHhccCCCCCccccchhhh
Confidence 9999999999999999999999998 7889999999999999999988888888877654311 112
Q ss_pred ccHHHHHHHHHHH
Q psy3959 401 HDIGVLVAEAYRL 413 (431)
Q Consensus 401 ~di~~Ll~~A~~L 413 (431)
.++..|++.||+-
T Consensus 444 ~~i~~Ll~~ay~k 456 (671)
T KOG4347|consen 444 IEIQDLLATAYEK 456 (671)
T ss_pred hHHHHHHHHHHHH
Confidence 2578999999984
No 12
>KOG2224|consensus
Probab=99.97 E-value=6.9e-30 Score=247.29 Aligned_cols=297 Identities=23% Similarity=0.399 Sum_probs=223.1
Q ss_pred CCCCHHHHHHHHH-CCCCCCcHHHHHHHhhCCCCCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCchhHHHHH----HH
Q psy3959 115 NLLNLEELRSLAW-SGIPNQVRPDAWRLLAGYLPTS--SERRQQVLERKRTEYWVFVKQYYDTDRDETYQDIYR----QI 187 (431)
Q Consensus 115 ~~~d~~~L~~l~~-~GIP~~~R~~vW~~Llg~lp~~--~~~~~~~l~~~~~~Y~~l~~~~~~~~~~~~~~~~~~----qI 187 (431)
...|--+||+.+. .||...+|+.||++|+.+++.. .+.|...+..+|++|.....+-..+...+.+..-.+ .+
T Consensus 420 qiedd~~lrk~iffggid~sir~evwpfllk~ys~est~edr~al~~~krkey~eiqqkrlysmspeeh~~fwknvq~tv 499 (781)
T KOG2224|consen 420 QIEDDLKLRKAIFFGGIDKSIRGEVWPFLLKCYSFESTFEDRAALMDIKRKEYEEIQQKRLYSMSPEEHIAFWKNVQFTV 499 (781)
T ss_pred cchhHHHhhhhheeccchhhhhcchhHHHHHHhccccchhHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHhheEEEE
Confidence 4556667888765 6899999999999999998764 588999999999999999887665555555544444 35
Q ss_pred HHhcccCCcchhhhcch--HHHHHHHHHHHHHHHhCCCCCCCCChhHHHHHHHHHHhhccCCCCCc----ccccc-cCCC
Q psy3959 188 HIDIPRMSPLMMLFQQK--LVQEMFERILFIWAIRHPASGYVQGINDLVTPFFVVFLQEFLPVGTD----LEQLD-LSTL 260 (431)
Q Consensus 188 ~~Dv~Rt~p~~~~f~~~--~~~~~L~rIL~~~a~~~p~igY~QGm~~iva~ll~v~~~~~~~~~~~----~~~~~-~~~~ 260 (431)
++||.||..++++|.+. .+.+.++|||.-||.|||.+||.|||+++.||.+.-..++ .+. +..+. .+++
T Consensus 500 dkdvvrtdrnn~ff~gddnpn~e~mk~illn~avyn~~m~ysqgmsdllapvlcevqne----setfwcfvglmqgmsdl 575 (781)
T KOG2224|consen 500 DKDVVRTDRNNPFFCGDDNPNTESMKNILLNFAVYNPAMGYSQGMSDLLAPVLCEVQNE----SETFWCFVGLMQGMSDL 575 (781)
T ss_pred ecceeeccCCCCcccCCCCCcHHHHHHHHHhheeecccccccccchhhcchhhhhhccc----cchhhhhhhhhccchhh
Confidence 89999999999999854 4678899999999999999999999999999987543321 000 00000 1112
Q ss_pred chhhhhhh--HHHHHHHHHHHHhhhhhhh--ccchhhHHHHHHHHHHHHHHhcHHHHHHHHHcCCCcc--hhhhhHHHHH
Q psy3959 261 PKEQRDII--EADSFCCLSKFLDGIQDNY--IFAQLGIQQKVNQLKDLIQRIDTNLHNHLLKHGVDYL--QFSFRWMNNL 334 (431)
Q Consensus 261 ~~e~~~~i--E~daF~~l~~ll~~~~~~f--~~~~~~i~~~~~~l~~ll~~~dp~L~~hL~~~~v~~~--~f~~~W~~tl 334 (431)
-..++..| |.|+||||+.||.. .+| ++....+...+.-+.++++...|..|+||.++|-+.. .||-||++.+
T Consensus 576 vapilaevldesdtfwcfvglmqn--a~fv~sp~d~dmd~~l~ylreliri~~~~fykhl~q~~ed~lellfchrwlllc 653 (781)
T KOG2224|consen 576 VAPILAEVLDESDTFWCFVGLMQN--AFFVCSPRDEDMDHNLLYLRELIRIMHPHFYKHLEQHGEDGLELLFCHRWLLLC 653 (781)
T ss_pred hhhHHHhhhccccchhhhhhhhcc--eEEEeCCcchhhhHhHHHHHHHHHHhhHHHHHHHHHhCcchhhHHHHHHHHHHH
Confidence 22222111 55566666665543 122 2334456667778899999999999999999987654 5999999999
Q ss_pred hccCCChhhHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHhcc-CCHHHHHHHHhCCCCCCCCcccHHHHHHHHHHH
Q psy3959 335 LTREVPLRCSIRLWDTYLAESDDFAAFQLYVCAAFLLHWRQKLLRE-RDFQGLMLMLQNLPTSNWSDHDIGVLVAEAYRL 413 (431)
Q Consensus 335 F~~~lp~~~~lRlWD~~l~eg~~~~~fl~~v~~AiL~~~r~~Ll~~-~d~~~ll~~L~~lp~~~~~~~di~~Ll~~A~~L 413 (431)
|.|+||-..++|||...++.--- ..||+|+|+||+-.+-+..+++ --.++++..+.|+...+ |=+.++++|..|
T Consensus 654 fkref~ea~airiweacwa~y~t-dyfhlficlaiiaiy~ddvi~q~l~~demllhf~nlam~m----dgelilrkar~l 728 (781)
T KOG2224|consen 654 FKREFPEAEAIRIWEACWAHYLT-DYFHLFICLAIIAIYADDVIAQNLAPDEMLLHFGNLAMHM----DGELILRKARGL 728 (781)
T ss_pred hhhcccHHHHHHHHHHHHHHhhH-HHHHHHHHHHHHHHhhhHHHHhhcCchhHHHhhhhhhhhc----CchhhHHHHHHH
Confidence 99999999999999998886321 2399999999999888877754 46788888888887753 778899999999
Q ss_pred HHHhccccc
Q psy3959 414 KVAFADAPN 422 (431)
Q Consensus 414 ~~~~~~a~~ 422 (431)
-.+|--.|+
T Consensus 729 l~qfr~lpk 737 (781)
T KOG2224|consen 729 LHQFRLLPK 737 (781)
T ss_pred HHHHhhcCC
Confidence 888765554
No 13
>KOG4436|consensus
Probab=99.96 E-value=1.5e-28 Score=253.26 Aligned_cols=259 Identities=20% Similarity=0.334 Sum_probs=223.6
Q ss_pred CCCCChhhHHHHHHHHHHhcc----CCCCHHHHHHHHHCCCCCCcHHHHHHHhhCC-----CCCChHHHHHHHHHHHHHH
Q psy3959 94 NSKVNESESSKIAKFNALLNL----NLLNLEELRSLAWSGIPNQVRPDAWRLLAGY-----LPTSSERRQQVLERKRTEY 164 (431)
Q Consensus 94 ~~~~~~~e~~r~~k~~~ll~~----~~~d~~~L~~l~~~GIP~~~R~~vW~~Llg~-----lp~~~~~~~~~l~~~~~~Y 164 (431)
...+.+...+-+..|.+++.. ...|.+.+-..+..|+|...|+.+|.+|.-- .+++.. ....--|
T Consensus 538 yeei~~c~k~~~~~wek~~e~~~~~~k~d~ed~~~~l~~gvprsrrgeiwtflA~q~~~~~~l~~~k------r~~~~p~ 611 (948)
T KOG4436|consen 538 YEEIVPCDKEVIETWEKILERTRIKIKKDMEDLHSALRTGVPRSRRGEIWTFLAEQHSLNHALPDKK------RPPDFPY 611 (948)
T ss_pred hhhhcchHHHHHHHHHHHHHHhhhcccccHHHHHHHHHccCchhhhHHHHHHHHHHHHHhccCCccc------CCCCCCh
Confidence 344555666677889888875 5679999999999999999999999998742 111111 1111245
Q ss_pred HHHHHHHccCCCCchhHHHHHHHHHhcccCCcchhhhcch--HHHHHHHHHHHHHHHhCCCCCCCCChhHHHHHHHHHHh
Q psy3959 165 WVFVKQYYDTDRDETYQDIYRQIHIDIPRMSPLMMLFQQK--LVQEMFERILFIWAIRHPASGYVQGINDLVTPFFVVFL 242 (431)
Q Consensus 165 ~~l~~~~~~~~~~~~~~~~~~qI~~Dv~Rt~p~~~~f~~~--~~~~~L~rIL~~~a~~~p~igY~QGm~~iva~ll~v~~ 242 (431)
+.++++. .+..+-|.+|+-||||.+++|..+ .++..+.++|.+|+..+|++|||||+.++++++|+.+.
T Consensus 612 ~~llkqL---------te~qhAi~idlgrtfp~h~~~~~qlg~gqlsl~n~Lkayslld~e~gycqg~~fv~gvlllh~~ 682 (948)
T KOG4436|consen 612 KELLKQL---------TEQQHAILIDLGRTFPTHPYFSDQLGLGQLSLFNLLKAYSLLDPEVGYCQGLSFVAGVLLLHMS 682 (948)
T ss_pred HHHHHHH---------HHHHHHHHHhhccccCCCHHHHhhccccHHHHHHHHHHhcccCccccccCcchhhhhhhHhhcc
Confidence 6666664 456688999999999999999855 57899999999999999999999999999999988665
Q ss_pred hccCCCCCcccccccCCCchhhhhhhHHHHHHHHHHHHhh--hhhhhccchhhHHHHHHHHHHHHHHhcHHHHHHHHHcC
Q psy3959 243 QEFLPVGTDLEQLDLSTLPKEQRDIIEADSFCCLSKFLDG--IQDNYIFAQLGIQQKVNQLKDLIQRIDTNLHNHLLKHG 320 (431)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~e~~~~iE~daF~~l~~ll~~--~~~~f~~~~~~i~~~~~~l~~ll~~~dp~L~~hL~~~~ 320 (431)
|+.||-++-.||.. ++.-|.+++..++..+..+.++++.+.++||+||.++.
T Consensus 683 --------------------------e~~afellk~LM~~r~~r~qy~pdm~~lq~qmyqLsrl~hd~hrdlyn~le~~e 736 (948)
T KOG4436|consen 683 --------------------------EENAFELLKFLMFDRGMRKQYRPDMKKLQIQMYQLSRLLHDYHRDLYNHLEENE 736 (948)
T ss_pred --------------------------hhhHHHHHHHHHHHHhhHhhhchHHHHHHHHHHHHHHHHHHHhHHHHHHHHhcc
Confidence 99999999999976 47889999999999999999999999999999999999
Q ss_pred CCcchhhhhHHHHHhccCCChhhHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHhccCCHHHHHHHHhCCCCC
Q psy3959 321 VDYLQFSFRWMNNLLTREVPLRCSIRLWDTYLAESDDFAAFQLYVCAAFLLHWRQKLLRERDFQGLMLMLQNLPTS 396 (431)
Q Consensus 321 v~~~~f~~~W~~tlF~~~lp~~~~lRlWD~~l~eg~~~~~fl~~v~~AiL~~~r~~Ll~~~d~~~ll~~L~~lp~~ 396 (431)
|.|..|+.+||+|+|+..+|+..+.|++|.++.+|.. +++.+++++|..++..|++..+|++|+.|+++.-+.
T Consensus 737 i~pslyAapw~lt~fasQf~lGfvarvfd~~flq~te---vifK~a~~llsv~k~~l~e~dn~e~i~d~~k~~~p~ 809 (948)
T KOG4436|consen 737 ISPSLYAAPWFLTVFASQFPLGFVARVFDLIFLQGTE---VIFKVALSLLSVHKQLLLEKDNFEEIVDFLKTTLPK 809 (948)
T ss_pred cChHHhhhHHHHHHHHhhCcchHHHHHHHHHHhhccc---hhhhhHHHHHHhhHHHHHhhhhHHHHHHHHHHhhhh
Confidence 9999999999999999999999999999999999977 789999999999999999999999999999986653
No 14
>KOG2197|consensus
Probab=99.94 E-value=6.9e-27 Score=240.47 Aligned_cols=264 Identities=26% Similarity=0.466 Sum_probs=223.3
Q ss_pred HCCCCCCcHHHHHHHhhCCCCCChHHHH--HHHHHHHHHHHHHHHHHccCCCCch-----hHHHHHHHHHhcccCCcchh
Q psy3959 127 WSGIPNQVRPDAWRLLAGYLPTSSERRQ--QVLERKRTEYWVFVKQYYDTDRDET-----YQDIYRQIHIDIPRMSPLMM 199 (431)
Q Consensus 127 ~~GIP~~~R~~vW~~Llg~lp~~~~~~~--~~l~~~~~~Y~~l~~~~~~~~~~~~-----~~~~~~qI~~Dv~Rt~p~~~ 199 (431)
+.|+-..+|+.+|+.+.++++.+...++ ..... ...|.....+|........ ..+....|.+||.||.+.+.
T Consensus 175 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~k~qW~~~~~~~~~~~~~~~~~~~~i~~dv~rtDr~~~ 253 (488)
T KOG2197|consen 175 SGGLSKSLRAEVWKFLLDYSPWDSTTRERVSLRKL-TDEYFRLKLQWSSTSPEQSPESEGYLERKSRIEKDVGRTDRSLE 253 (488)
T ss_pred ccccccchhhhhhhhhhcccCcccccccccccccc-cccHhhhhhhheeccccccccccchhhhhhhhhhhccccchhhh
Confidence 3467669999999999999887653322 22222 6688888888866543322 12445789999999999999
Q ss_pred hhcchHH--HHHHHHHHHHHHHhCCCCCCCCChhHHHHHHHHHHhhccCCCCCcccccccCCCchhhhhhhHHHHHHHHH
Q psy3959 200 LFQQKLV--QEMFERILFIWAIRHPASGYVQGINDLVTPFFVVFLQEFLPVGTDLEQLDLSTLPKEQRDIIEADSFCCLS 277 (431)
Q Consensus 200 ~f~~~~~--~~~L~rIL~~~a~~~p~igY~QGm~~iva~ll~v~~~~~~~~~~~~~~~~~~~~~~e~~~~iE~daF~~l~ 277 (431)
++..+.. ...|..||.+|+.+++++||||||+++.+|++.++.+ |.+|||||+
T Consensus 254 ~~~~~~n~~~~~l~~iL~ty~~~~~d~GY~QgmSDllspi~~v~~d-------------------------e~~aFwcFv 308 (488)
T KOG2197|consen 254 FYEGEENPHLARLVDILLTYAVYDFDLGYCQGMSDLLSPILIVMED-------------------------EVEAFWCFV 308 (488)
T ss_pred hhhcccccCHHHHHHHHhhcccccCccccccCchhhcCcceeeecC-------------------------chHHHHHHH
Confidence 9997777 8999999999999999999999999999999999887 999999999
Q ss_pred HHHhhhhhhhccchhhHHHHHHHHHHHHHHhcHHHHHHHHHcCCCcchhhhhHHHHHhccCCChhhHHHHHHHHhcCCCC
Q psy3959 278 KFLDGIQDNYIFAQLGIQQKVNQLKDLIQRIDTNLHNHLLKHGVDYLQFSFRWMNNLLTREVPLRCSIRLWDTYLAESDD 357 (431)
Q Consensus 278 ~ll~~~~~~f~~~~~~i~~~~~~l~~ll~~~dp~L~~hL~~~~v~~~~f~~~W~~tlF~~~lp~~~~lRlWD~~l~eg~~ 357 (431)
.+|++++.+|..++.+++.++..+..+++..||.+|+||+..+.....|++||+...|-++|.++++++||..+...-..
T Consensus 309 ~fm~~~~~nF~~d~~~~~~Ql~~~~~li~~~dp~l~~hLe~~d~~~~~f~fr~l~v~frrEf~~ed~l~LWEvlw~~~~~ 388 (488)
T KOG2197|consen 309 GFMDRLRHNFRIDQSGMQTQLAQLSSLIQELDPRLYQHLEKLDAGDLFFCFRMLLVPFRREFEFEDSLRLWEVLWTDLPS 388 (488)
T ss_pred HHHHHHhhcCccccccHHHHhhhhhhhccccCHHHHhhccccCCCccceeeehhhcccccccccccHHHHHHHHHhcCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999997665
Q ss_pred chhHHHHHHHHHHHHHHHHHhcc-CCHHHHHHHHhCCCCCCCCcccHHHHHHHHHHHHHHhcccc
Q psy3959 358 FAAFQLYVCAAFLLHWRQKLLRE-RDFQGLMLMLQNLPTSNWSDHDIGVLVAEAYRLKVAFADAP 421 (431)
Q Consensus 358 ~~~fl~~v~~AiL~~~r~~Ll~~-~d~~~ll~~L~~lp~~~~~~~di~~Ll~~A~~L~~~~~~a~ 421 (431)
. +|++|++.|+|....+.|+.. .++.+++..+..+... .|..-++..|-.+...+...+
T Consensus 389 ~-~f~~~~~~~~l~~~~~~l~~~~~~~~e~l~~i~~~~~~----~d~~~~~~~A~~~~~~~k~~~ 448 (488)
T KOG2197|consen 389 P-HFHLYVAPAILNKDPQTLMEQGKSFNEVLKHVNLLSEK----ADVLWVLVRAEALERQNKQME 448 (488)
T ss_pred c-hHHHHHHHhhhhcchHHHHhcCccchhHHhhccccccc----chhhhHHHHHHHHHHHHHhcc
Confidence 3 799999999999988888876 5778888878776664 366767777766665554433
No 15
>KOG1102|consensus
Probab=99.93 E-value=1.1e-25 Score=227.59 Aligned_cols=242 Identities=24% Similarity=0.405 Sum_probs=199.9
Q ss_pred CCCHHHHHHHHHCCCCCCcHHHHHHHhhCCCCCChHHHHHHHHHHHHHHHHHHHHHccCCCCchhHHHHHHHHHhcccCC
Q psy3959 116 LLNLEELRSLAWSGIPNQVRPDAWRLLAGYLPTSSERRQQVLERKRTEYWVFVKQYYDTDRDETYQDIYRQIHIDIPRMS 195 (431)
Q Consensus 116 ~~d~~~L~~l~~~GIP~~~R~~vW~~Llg~lp~~~~~~~~~l~~~~~~Y~~l~~~~~~~~~~~~~~~~~~qI~~Dv~Rt~ 195 (431)
.....+|......|||..+|+.+|.++++. ..+.++..-..+.....+ +.......+| .|+.||+
T Consensus 132 ~~~~~~l~~~~~~gip~~~r~~~W~l~~~~----------~~~~~~~~~~~l~~~~~~----~~~~~~~~~~-~d~~Rt~ 196 (397)
T KOG1102|consen 132 LRRPLKLSRRVLVGIPDELRGLVWQLLLYA----------VEESLFDSLDELYRLQLD----EPEPHESEII-RDLSRTF 196 (397)
T ss_pred cccHHHHHHHhhccccHHHHHHHHHHhccc----------HhhhhhhhHHHHHHHhhc----cCCCchhHHH-hhccCcC
Confidence 356788888889999999999999999985 111111111111111111 1111223677 9999999
Q ss_pred cchhhhcc--hHHHHHHHHHHHHHHHhCCCCCCCCChhHHHHHHHHHHhhccCCCCCcccccccCCCchhhhhhhHHHHH
Q psy3959 196 PLMMLFQQ--KLVQEMFERILFIWAIRHPASGYVQGINDLVTPFFVVFLQEFLPVGTDLEQLDLSTLPKEQRDIIEADSF 273 (431)
Q Consensus 196 p~~~~f~~--~~~~~~L~rIL~~~a~~~p~igY~QGm~~iva~ll~v~~~~~~~~~~~~~~~~~~~~~~e~~~~iE~daF 273 (431)
|.+..|.. ..+|+.+.+|+.+|+.++|++||||||..++++++.++. |++||
T Consensus 197 ~~~~~f~~~~~~~q~sl~~vl~a~s~~~~~~gy~q~m~~~a~~ll~~~~--------------------------ee~af 250 (397)
T KOG1102|consen 197 PAHLLFRKRYGVGQRSLYNVLKAYSLYDPEVGYCQGMSSIAAPLLLYLP--------------------------EEEAF 250 (397)
T ss_pred cchhhhhhhcCcccccccccchhhcccCCCcccccchhhHhhhhhccCc--------------------------hhhhh
Confidence 99999975 357888999999999999999999999999999988655 99999
Q ss_pred HHHHHHHhhh-hhhhccchhhHHHHHHHHHHHHHHhcHHHHHHHHHcCCCcchhhhhHHHHHhccCCChhhHHHHHHHHh
Q psy3959 274 CCLSKFLDGI-QDNYIFAQLGIQQKVNQLKDLIQRIDTNLHNHLLKHGVDYLQFSFRWMNNLLTREVPLRCSIRLWDTYL 352 (431)
Q Consensus 274 ~~l~~ll~~~-~~~f~~~~~~i~~~~~~l~~ll~~~dp~L~~hL~~~~v~~~~f~~~W~~tlF~~~lp~~~~lRlWD~~l 352 (431)
|+++++|... .+.|..+.++++.....+..+++...|.++.|+.+.+++..+|+.+|++|+|+..+|++.+.|+||.++
T Consensus 251 ~~lv~l~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~p~~~~~~~~~~~~~~~~~s~w~~t~f~~k~p~~~~~ri~d~~~ 330 (397)
T KOG1102|consen 251 PLLVKLMKNYGLDLLSPGFSGLQRSFRQLQRLLKELIPKLLDHLLPQGIELSMYASQWFLTLFAAKFPLELVLRIWDALF 330 (397)
T ss_pred hhhhhhhhccchhcccccCCchhhhHHHHHHHHHHhChhhhhhccccccccceeccceeeEeeeccccHHHHHHHhHHHH
Confidence 9999999865 556688899999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCchhHHHHHHHHHHHHHHHHHhccCCHHHHHHHHhCCCCCCCCccc
Q psy3959 353 AESDDFAAFQLYVCAAFLLHWRQKLLRERDFQGLMLMLQNLPTSNWSDHD 402 (431)
Q Consensus 353 ~eg~~~~~fl~~v~~AiL~~~r~~Ll~~~d~~~ll~~L~~lp~~~~~~~d 402 (431)
.+|.. +++.++++++.+..+.++ ..+++++++++++.+.......+
T Consensus 331 ~~g~~---i~~~~~~~l~~~~~~~~~-~~~~e~~~~~l~~~~~~~~~~~~ 376 (397)
T KOG1102|consen 331 VEGVS---ILFRFSLALLKHKADDLL-DLDFESLLSYLRVDLPKSYDSEL 376 (397)
T ss_pred HhchH---HHHHHHHHHhhhhhHHHh-hccHHHHHHHHhcccHhhcCccc
Confidence 99944 778999999999999988 47799999999987776554443
No 16
>KOG2595|consensus
Probab=99.92 E-value=1.6e-24 Score=205.50 Aligned_cols=251 Identities=21% Similarity=0.332 Sum_probs=203.4
Q ss_pred CCCCHHHHHHHHHC--C-CCCCcHHHHHHHhhCCCCCChHHHHHHHHHHHHHHHHHHHHHccCCCCchhHHHHHHHHHhc
Q psy3959 115 NLLNLEELRSLAWS--G-IPNQVRPDAWRLLAGYLPTSSERRQQVLERKRTEYWVFVKQYYDTDRDETYQDIYRQIHIDI 191 (431)
Q Consensus 115 ~~~d~~~L~~l~~~--G-IP~~~R~~vW~~Llg~lp~~~~~~~~~l~~~~~~Y~~l~~~~~~~~~~~~~~~~~~qI~~Dv 191 (431)
...|.+.|+...-. | +.+++|+.+|+.|+|. ..| ......|....+. ...+.|+..|+
T Consensus 44 ~~~dv~~Lr~i~l~p~Glv~dslRk~vWp~L~~~-~~n--------~~~~~~~~~~~q~----------hkd~nQV~LDv 104 (395)
T KOG2595|consen 44 LKKDVDALRYIGLSPGGLVNDSLRKDVWPELLAL-NIN--------HLDATSTLTPVQK----------HKDYNQVILDV 104 (395)
T ss_pred hhccHHHHHHhccCCCccccHHHHHHHHHHHhcc-ccC--------CCcccccCChhhh----------CcccceEEEeh
Confidence 45899999998764 5 7889999999999995 111 1111122222222 24468999999
Q ss_pred ccCCcchh----hhcchHHHHHHHHHHHHHHHhCCCCCCCCChhHHHHHHHHHHhhccCCCCCcccccccCCCchhhhhh
Q psy3959 192 PRMSPLMM----LFQQKLVQEMFERILFIWAIRHPASGYVQGINDLVTPFFVVFLQEFLPVGTDLEQLDLSTLPKEQRDI 267 (431)
Q Consensus 192 ~Rt~p~~~----~f~~~~~~~~L~rIL~~~a~~~p~igY~QGm~~iva~ll~v~~~~~~~~~~~~~~~~~~~~~~e~~~~ 267 (431)
.|++...+ .-+....|+.|..++......+|...|.||.+|||..|++|+.
T Consensus 105 ~RSl~rfppg~p~~~R~~Lq~qL~~LI~rVl~~yP~L~YYQGyHDI~~tfLLv~g------------------------- 159 (395)
T KOG2595|consen 105 ERSLGRFPPGIPKELRLQLQKQLTELILRVLRKYPTLNYYQGYHDIVVTFLLVVG------------------------- 159 (395)
T ss_pred hhhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCcchhcchhHHHHHHHHhhh-------------------------
Confidence 99974443 3333466777777777777889999999999999999999887
Q ss_pred hHHHHHHHHHHHHh-hhhhhhccchhhHHHHHHHHHHHHHHhcHHHHHHHHHcCCCcchhhhhHHHHHhccCC-ChhhHH
Q psy3959 268 IEADSFCCLSKFLD-GIQDNYIFAQLGIQQKVNQLKDLIQRIDTNLHNHLLKHGVDYLQFSFRWMNNLLTREV-PLRCSI 345 (431)
Q Consensus 268 iE~daF~~l~~ll~-~~~~~f~~~~~~i~~~~~~l~~ll~~~dp~L~~hL~~~~v~~~~f~~~W~~tlF~~~l-p~~~~l 345 (431)
|.+|+-.+..|-. .++++..++..+-.+.+..+.-+++..+|+||+.|++..+.+. |+..|++|+|+|.+ +++.++
T Consensus 160 -E~~Al~l~E~L~~~~lrdfM~~Tld~t~~qL~~i~~iIk~~nP~Ly~~l~~aevgtl-FaLsWllTWFaH~L~~~~~vv 237 (395)
T KOG2595|consen 160 -ELEALSLMEELSTLHLRDFMLPTLDFTVRQLRLISPIIKEVNPELYQFLQSAEVGTL-FALSWLLTWFAHNLKDIRIVV 237 (395)
T ss_pred -hHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChHHHHHHHhhcccce-ehhhHHHHHHhhcchhHHHHH
Confidence 8889998888865 4689988899999999999999999999999999999999887 99999999999998 679999
Q ss_pred HHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHhcc-CCHHHHHHHHhCCCCCCCCcccHHHHHHHHHHHHHHhc
Q psy3959 346 RLWDTYLAESDDFAAFQLYVCAAFLLHWRQKLLRE-RDFQGLMLMLQNLPTSNWSDHDIGVLVAEAYRLKVAFA 418 (431)
Q Consensus 346 RlWD~~l~eg~~~~~fl~~v~~AiL~~~r~~Ll~~-~d~~~ll~~L~~lp~~~~~~~di~~Ll~~A~~L~~~~~ 418 (431)
|++|.|++..+- ..+|+|+|+++..+.+|+++ .|+.-+..+|+.+|.. .-.+.+|.++..+-..++
T Consensus 238 RlfD~Flas~pl---~piyv~A~vvL~r~~eIl~~~~dms~~H~lLs~iPq~----lp~d~lik~s~~~i~~~~ 304 (395)
T KOG2595|consen 238 RLFDFFLASHPL---LPIYVYAAVVLYRRSEILKCDCDMSLLHGLLSTIPQD----LPYDTLIKESVLLITRKP 304 (395)
T ss_pred HHHHHHHhcCcc---hhHHHHHHHhhhhHHHHHHHHhhhHHHHHHHHhCccc----cCHHHHHHHHHHHHhcCC
Confidence 999999998764 66899999999999999987 5888888899999973 467899999877755554
No 17
>KOG2221|consensus
Probab=99.90 E-value=1.6e-25 Score=200.24 Aligned_cols=189 Identities=22% Similarity=0.327 Sum_probs=161.1
Q ss_pred HHHHHHHHHHhccCC----CCHHHHHHHHHCCCCCCcHHHHHHHhhCCCCCChHHHHHHHHHHHHHHHHHHHHHccCCCC
Q psy3959 102 SSKIAKFNALLNLNL----LNLEELRSLAWSGIPNQVRPDAWRLLAGYLPTSSERRQQVLERKRTEYWVFVKQYYDTDRD 177 (431)
Q Consensus 102 ~~r~~k~~~ll~~~~----~d~~~L~~l~~~GIP~~~R~~vW~~Llg~lp~~~~~~~~~l~~~~~~Y~~l~~~~~~~~~~ 177 (431)
..|..||..|++++. ...++++-.|++|||+.+|+.+|+.|.|...+ ...++..|..+..+
T Consensus 72 ~~ReskwL~mldnw~~~m~kk~~~ir~rcrkgippslr~Raw~ylsGa~~~--------~~~np~~~~~~~~~------- 136 (267)
T KOG2221|consen 72 RYRESKWLHMLDNWHEEMRKKQKKIRPRCRKGIPPSLRGRAWRYLSGAPSP--------PPKNPVVFDELGPA------- 136 (267)
T ss_pred HhhHHHHHHHHHHHHHHHHhccccccchhhcCCCcccchhHHHhhcCCCCC--------CCCCcchhhhccCC-------
Confidence 457889999998854 44577888999999999999999999996221 11234455544433
Q ss_pred chhHHHHHHHHHhcccCCcchhhhcc--hHHHHHHHHHHHHHHHhCCCCCCCCChhHHHHHHHHHHhhccCCCCCccccc
Q psy3959 178 ETYQDIYRQIHIDIPRMSPLMMLFQQ--KLVQEMFERILFIWAIRHPASGYVQGINDLVTPFFVVFLQEFLPVGTDLEQL 255 (431)
Q Consensus 178 ~~~~~~~~qI~~Dv~Rt~p~~~~f~~--~~~~~~L~rIL~~~a~~~p~igY~QGm~~iva~ll~v~~~~~~~~~~~~~~~ 255 (431)
..+-.+.+-|++|++|.||.+.+|-. ..++..|+|+|.+|.+++|+.||||+=..|++.++..+.
T Consensus 137 pG~p~t~e~i~kdl~rqfp~hemf~s~~k~gkqelfr~lka~ti~~pe~g~cq~qapiaa~llmhmp------------- 203 (267)
T KOG2221|consen 137 PGDPKTAEGIHKDLHRQFPFHEMFGSSGKTGKQELFRVLKAYTIYKPEEGYCQAQAPIAAVLLMHMP------------- 203 (267)
T ss_pred CCCCcchhhhccccccCCCcccccccccccchHHHHHHHHHHHHhCchhhhhhhhchHHHHHHhccc-------------
Confidence 33456778999999999999999973 457888999999999999999999999999998887544
Q ss_pred ccCCCchhhhhhhHHHHHHHHHHHHhhh-hhhhccchhhHHHHHHHHHHHHHHhcHHHHHHHHHcCCCcchhhhhHH
Q psy3959 256 DLSTLPKEQRDIIEADSFCCLSKFLDGI-QDNYIFAQLGIQQKVNQLKDLIQRIDTNLHNHLLKHGVDYLQFSFRWM 331 (431)
Q Consensus 256 ~~~~~~~e~~~~iE~daF~~l~~ll~~~-~~~f~~~~~~i~~~~~~l~~ll~~~dp~L~~hL~~~~v~~~~f~~~W~ 331 (431)
++++||||+++++++ +++|+.+...||..-..+..|+++.+|..|.||...+|++..|...||
T Consensus 204 -------------~rdaf~~~vqicekylqgy~~sgleaiq~dg~il~~Llkk~~~p~~rH~~~~kvdp~lym~ewF 267 (267)
T KOG2221|consen 204 -------------ARDAFWCFVQICEKYLQGYYSSGLEAIQNDGGILEGLLKKASPPPYRHLGGDKVDPLLYMTEWF 267 (267)
T ss_pred -------------HHHHHHHHHHHHHHHcccccccchhhhhcccHHHHHHHHhcCCCCCcccccCCCCHHHhhhccC
Confidence 999999999999986 999999999999999999999999999999999999999999999997
No 18
>KOG4436|consensus
Probab=99.61 E-value=8.3e-15 Score=152.35 Aligned_cols=256 Identities=16% Similarity=0.176 Sum_probs=201.4
Q ss_pred CCCHHHHHHHHHCCCCCCcHHHHHHHhhCCCCCChHHHHHHHHHHHHHHHHHHHHHccCCCCchhHHHHHHHHHhcccCC
Q psy3959 116 LLNLEELRSLAWSGIPNQVRPDAWRLLAGYLPTSSERRQQVLERKRTEYWVFVKQYYDTDRDETYQDIYRQIHIDIPRMS 195 (431)
Q Consensus 116 ~~d~~~L~~l~~~GIP~~~R~~vW~~Llg~lp~~~~~~~~~l~~~~~~Y~~l~~~~~~~~~~~~~~~~~~qI~~Dv~Rt~ 195 (431)
.....+|+.++.+|||+..|..+|..|+.. +-+. . ..--+.|..+.... ........+-.|..|+.||.
T Consensus 171 ~~s~~~l~e~Ve~~~p~~frli~~qlLssa-td~~----q--~~I~e~~sdl~~~s----~~~Ek~~~~~~Irrdi~~~~ 239 (948)
T KOG4436|consen 171 KKSLHKLKELVEGGIPMHFRLIRWQLLSSA-TDRE----Q--ALIFEDYSDLAPCS----SQQEKELHIGIIRRDIERTY 239 (948)
T ss_pred hhchhhhHHHHhcCCchHHHHHHHHHhccc-ccch----h--hHHHHHHHHHhhhc----chhhhhHHHHHHHHHhhccC
Confidence 345688899999999999999999999964 1111 1 11234555555442 11222346678999999999
Q ss_pred cchhhhcch-H--------HHHHHHHHHHHHHHhCCCCCCCCChhHHHHHHHHHHhhccCCCCCcccccccCCCchhhhh
Q psy3959 196 PLMMLFQQK-L--------VQEMFERILFIWAIRHPASGYVQGINDLVTPFFVVFLQEFLPVGTDLEQLDLSTLPKEQRD 266 (431)
Q Consensus 196 p~~~~f~~~-~--------~~~~L~rIL~~~a~~~p~igY~QGm~~iva~ll~v~~~~~~~~~~~~~~~~~~~~~~e~~~ 266 (431)
|.+.+|... . .++.|.++..+|+...-++|||||-+.+++.+++.+.
T Consensus 240 ~eh~~fke~~s~~~~~~~~~~d~LfN~~K~~~~~~~E~ifsqGs~~m~Gll~l~~~------------------------ 295 (948)
T KOG4436|consen 240 PEHYFFKEQSSTVCSDIRFAQDQLFNVAKAYSTKDLEVIFSQGSAFMVGLLLLQMP------------------------ 295 (948)
T ss_pred cceeeeccCccCCcchhHHHHHHHHHHHHHHhhhhhhhhhccchHHHHHHHHhcCc------------------------
Confidence 999999832 2 5899999999999999999999999999998887655
Q ss_pred hhHHHHHHHHHHHHhh--hhhhhccchhhHHHHHHHHHHHHHHhcH-HHHHHHHHcCCCcchhhhhHHHHHhccCCChhh
Q psy3959 267 IIEADSFCCLSKFLDG--IQDNYIFAQLGIQQKVNQLKDLIQRIDT-NLHNHLLKHGVDYLQFSFRWMNNLLTREVPLRC 343 (431)
Q Consensus 267 ~iE~daF~~l~~ll~~--~~~~f~~~~~~i~~~~~~l~~ll~~~dp-~L~~hL~~~~v~~~~f~~~W~~tlF~~~lp~~~ 343 (431)
++.+|-.++.+|.. ++..+.+.+..+-..+..++...+...| .|+.|+.+.+++..+|+-.||++.|...+|+.+
T Consensus 296 --~E~assv~~~lm~~~rl~~l~kpe~~~l~~~~~q~e~~~q~~sp~dl~sH~~eq~~h~S~~~rs~flt~~ltt~Pi~~ 373 (948)
T KOG4436|consen 296 --VEEASSVKVQLMILYRLRELSKPEMEPLGLCMFQLECTNQDQSPMDLFSHFPEQHFHTSMYARSWFLTNFLTTFPIFM 373 (948)
T ss_pred --HHHHHHHHHHHHHhhcccccCCcccchhHHHHHhhcccccccchhHHhhcccccCCCccHHHHHHHHHhhcccCchhh
Confidence 88899999999875 4788888888888888899999999999 999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHhccCCHHHHHHHHhCCCCCCCCcccHHHHHHHHHH
Q psy3959 344 SIRLWDTYLAESDDFAAFQLYVCAAFLLHWRQKLLRERDFQGLMLMLQNLPTSNWSDHDIGVLVAEAYR 412 (431)
Q Consensus 344 ~lRlWD~~l~eg~~~~~fl~~v~~AiL~~~r~~Ll~~~d~~~ll~~L~~lp~~~~~~~di~~Ll~~A~~ 412 (431)
.-|+.|+|.++|-. +.+++.+|++...++.=+...|+++...+.+.--.... .-+.+.+...|++
T Consensus 374 a~r~~~~f~~egll---k~fr~~ia~~~~~~d~~~~s~D~EG~~~~~qr~~s~~v-ggtp~k~~t~a~q 438 (948)
T KOG4436|consen 374 AARISDTFSSEGLL---KRFRDSIAYLHQLRDIELESLDMEGMLSYFQRNRSNTV-GGTPDKLRTAAWQ 438 (948)
T ss_pred ccccccccccccHH---HHHhhhHHHHHHHhhhhhhccCccccccchhhcccccc-CCCCchHHHHHHH
Confidence 99999999999854 55689999994434433446899999999884333222 2234455555544
No 19
>KOG3636|consensus
Probab=99.60 E-value=6.3e-15 Score=144.49 Aligned_cols=177 Identities=19% Similarity=0.338 Sum_probs=141.2
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCC--hhHHHHHHHHHHhhccCCCCCcccccccCCCchhhhhhhHHHHHHHHHHHHhhh
Q psy3959 206 VQEMFERILFIWAIRHPASGYVQG--INDLVTPFFVVFLQEFLPVGTDLEQLDLSTLPKEQRDIIEADSFCCLSKFLDGI 283 (431)
Q Consensus 206 ~~~~L~rIL~~~a~~~p~igY~QG--m~~iva~ll~v~~~~~~~~~~~~~~~~~~~~~~e~~~~iE~daF~~l~~ll~~~ 283 (431)
+...|+.++..|+. +..+.|... .-.|.-|++.+-+. -++.|-||.++++++
T Consensus 91 vv~dlES~iTfYCK-~Rn~~Y~~d~gWi~lL~pl~~L~lp-------------------------rsd~fN~F~ai~~kY 144 (669)
T KOG3636|consen 91 VVSDLESFITFYCK-KRNMDYIKDIGWITLLEPLLLLNLP-------------------------RSDEFNVFFAITTKY 144 (669)
T ss_pred hhHhhhhHhhhhhh-ccCCcccccccHHHHHHHHHHhcCC-------------------------cchhhhhhHhhhhcc
Confidence 44568888888875 345667664 44556666654333 788999999999873
Q ss_pred hhhhccchh-hHHHHHHHHHHHHHHhcHHHHHHHHHcCCCcchhhhhHHHHHhccCCChhhHHHHHHHHhcCCCCchhHH
Q psy3959 284 QDNYIFAQL-GIQQKVNQLKDLIQRIDTNLHNHLLKHGVDYLQFSFRWMNNLLTREVPLRCSIRLWDTYLAESDDFAAFQ 362 (431)
Q Consensus 284 ~~~f~~~~~-~i~~~~~~l~~ll~~~dp~L~~hL~~~~v~~~~f~~~W~~tlF~~~lp~~~~lRlWD~~l~eg~~~~~fl 362 (431)
++... .--.-+..|.-||+.|+|+|+.||+...+.|.+|+..||-+||+...+.+.+..+||.|+-.+++| ++
T Consensus 145 ----IPkdcrpkg~~Fh~FRLLlqYHdPelc~~LdtkkitPd~Y~lnWf~sLFas~~Stev~~a~WdlY~qqaDPF--~v 218 (669)
T KOG3636|consen 145 ----IPKDCRPKGQIFHLFRLLLQYHDPELCNHLDTKKITPDMYTLNWFASLFASSMSTEVCHALWDLYIQQADPF--LV 218 (669)
T ss_pred ----cCCCCCCCCccchHHHHHHHhcCHHHhhhhhccccCchHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCce--eh
Confidence 33211 111234567789999999999999999999999999999999999999999999999999999998 77
Q ss_pred HHHHHHHHHHHHHHHhcc--CCHHHHHHHHhCCCCCCCCcccHHHHHHHHHHHHH
Q psy3959 363 LYVCAAFLLHWRQKLLRE--RDFQGLMLMLQNLPTSNWSDHDIGVLVAEAYRLKV 415 (431)
Q Consensus 363 ~~v~~AiL~~~r~~Ll~~--~d~~~ll~~L~~lp~~~~~~~di~~Ll~~A~~L~~ 415 (431)
+++++.||+.-|++||+. ...+++++||.|.|.+ .+-+|+..+.+-|.-...
T Consensus 219 ffLaliiLiNake~ILq~~sdsKEe~ikfLenmp~~-L~~eDvpDffsLAqyY~~ 272 (669)
T KOG3636|consen 219 FFLALIILINAKEEILQVKSDSKEEAIKFLENMPAQ-LSVEDVPDFFSLAQYYSD 272 (669)
T ss_pred HHHHHHHhcccHHHHhhhccccHHHHHHHHHcCchh-cccccchhHHHHHHHHhh
Confidence 888999999999999976 5789999999999984 667899888887765433
No 20
>KOG2801|consensus
Probab=99.06 E-value=2.1e-09 Score=101.22 Aligned_cols=252 Identities=17% Similarity=0.247 Sum_probs=172.2
Q ss_pred CCHHHHHHHHHCCC---CCCcHHHHHHHhhCCCCCChHHHHHHHHHHHHHHHHHHHHHccCCCCchhHHHHHHHHHhccc
Q psy3959 117 LNLEELRSLAWSGI---PNQVRPDAWRLLAGYLPTSSERRQQVLERKRTEYWVFVKQYYDTDRDETYQDIYRQIHIDIPR 193 (431)
Q Consensus 117 ~d~~~L~~l~~~GI---P~~~R~~vW~~Llg~lp~~~~~~~~~l~~~~~~Y~~l~~~~~~~~~~~~~~~~~~qI~~Dv~R 193 (431)
..+.+|+++++.|. .+.+|++|+..|..-.|-.. .......|...+.+....-... . --...=|.-
T Consensus 30 telqelkqlarqgywaqshalrgkvyqrlirdipcrt------vtpdasvysdivgkivgkhsss----c-lplpefvdn 98 (559)
T KOG2801|consen 30 TELQELKQLARQGYWAQSHALRGKVYQRLIRDIPCRT------VTPDASVYSDIVGKIVGKHSSS----C-LPLPEFVDN 98 (559)
T ss_pred HhHHHHHHHHhcchHHhhhhhhhHHHHHHHhcCCccc------cCCchhHHHHHHHHHhccCCcc----c-ccchhhccc
Confidence 45788899998883 66799999998887655321 0111235555555432211000 0 000000111
Q ss_pred C-CcchhhhcchHHHHHHHHHHHHHHHhCCCCCCCCChhHHHHHHHHHHhhccCCCCCcccccccCCCchhhhhhhHHHH
Q psy3959 194 M-SPLMMLFQQKLVQEMFERILFIWAIRHPASGYVQGINDLVTPFFVVFLQEFLPVGTDLEQLDLSTLPKEQRDIIEADS 272 (431)
Q Consensus 194 t-~p~~~~f~~~~~~~~L~rIL~~~a~~~p~igY~QGm~~iva~ll~v~~~~~~~~~~~~~~~~~~~~~~e~~~~iE~da 272 (431)
| .|.. --+..+....++||.+.+...|++.+|..+..+++.++....+ |+++
T Consensus 99 tqvpsy--clnargegavrkilKOGanqfpdisfcpalpavvalllhysid-------------------------eaec 151 (559)
T KOG2801|consen 99 TQVPSY--CLNARGEGAVRKILLCLANQFPDISFCPALPAVVALLLHYSID-------------------------EAEC 151 (559)
T ss_pred CcCchh--hhcCcCchhHHHHHHHHhccCCCcccCcchHHHHHHHHHhccc-------------------------HHHH
Confidence 1 1111 1123345667899999999999999999999999988775544 8999
Q ss_pred HHHHHHHHhhh---hhhhccchhhHHHHHHHHHHHHHHhcHHHHHHHHHcCCCcchhhhhHHHHHhccCCChhhHHHHHH
Q psy3959 273 FCCLSKFLDGI---QDNYIFAQLGIQQKVNQLKDLIQRIDTNLHNHLLKHGVDYLQFSFRWMNNLLTREVPLRCSIRLWD 349 (431)
Q Consensus 273 F~~l~~ll~~~---~~~f~~~~~~i~~~~~~l~~ll~~~dp~L~~hL~~~~v~~~~f~~~W~~tlF~~~lp~~~~lRlWD 349 (431)
|---++++..- +.........+...+..|..++.++....|+.+....-+..+....|-..+|. ++|+--..|++|
T Consensus 152 fekacrilacndpgrrlidqsflafesscmtfgdlvnkycqaahklmvavsedvlqvyadwqrwlfg-elplcyfarvfd 230 (559)
T KOG2801|consen 152 FEKACRILACNDPGRRLIDQSFLAFESSCMTFGDLVNKYCQAAHKLMVAVSEDVLQVYADWQRWLFG-ELPLCYFARVFD 230 (559)
T ss_pred HHHhheeeeecCcchhhhhhHHHHHHhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhc-cchHHHHHHHhh
Confidence 98877776531 23333344566777888999999999998888877766777778889888775 599999999999
Q ss_pred HHhcCCCCchhHHHHHHHHHHHHHHHHH----hcc-CCHHHHHHHHhCCCCCCCCcccHHHHHHHHHHHH
Q psy3959 350 TYLAESDDFAAFQLYVCAAFLLHWRQKL----LRE-RDFQGLMLMLQNLPTSNWSDHDIGVLVAEAYRLK 414 (431)
Q Consensus 350 ~~l~eg~~~~~fl~~v~~AiL~~~r~~L----l~~-~d~~~ll~~L~~lp~~~~~~~di~~Ll~~A~~L~ 414 (431)
.|+.||.+ +++++++|||+.+.+.- ++. .-.+++-.|.+++... -..+.|+..|+.++
T Consensus 231 vflvegyk---vlyrvalailkffhkvragqplesdsvkqdirtfvrdiakt----vspekllekafair 293 (559)
T KOG2801|consen 231 VFLVEGYK---VLYRVALAILKFFHKVRAGQPLESDSVKQDIRTFVRDIAKT----VSPEKLLEKAFAIR 293 (559)
T ss_pred heeecchH---HHHHHHHHHHHHHHHhhcCCCCccchHHHHHHHHHHHHHhh----CCHHHHHHHHHHHH
Confidence 99999998 78999999999876532 222 2246777788776552 25788999998875
No 21
>KOG1648|consensus
Probab=98.62 E-value=1.8e-09 Score=107.56 Aligned_cols=274 Identities=19% Similarity=0.303 Sum_probs=174.3
Q ss_pred hHHHHHHhcccccCCCCCCCCCCCCChhhHHHHHHHHHHhccCCC-CHHHHHHHHHCCCCCCcHHHHHHHhhCCCCCChH
Q psy3959 73 AALNVINNHKTKQFETSSSSRNSKVNESESSKIAKFNALLNLNLL-NLEELRSLAWSGIPNQVRPDAWRLLAGYLPTSSE 151 (431)
Q Consensus 73 ~~~~~~~~h~~~~~~~lp~~~~~~~~~~e~~r~~k~~~ll~~~~~-d~~~L~~l~~~GIP~~~R~~vW~~Llg~lp~~~~ 151 (431)
|..+.|.+|.... ...|......++++ -|++....+.+ ...-|....+.|+....|+.+|+.+++.+...+.
T Consensus 508 THLsaLV~h~~~~-pD~pcda~~glt~~------~W~qy~~d~t~~e~~~l~~~~~g~~e~~~r~~~~p~~~~~~~~g~~ 580 (813)
T KOG1648|consen 508 THLSALVDHKTLI-PDDPCDASAGLTEK------FWKQYRADPTIEEWRVLEAEVRGRDEEAFRAARAPKAASPVREGSC 580 (813)
T ss_pred HHHHHHhcccccC-CCCCCCccccccHH------HHHHHhcCCchHHHHHHHHHHhcccHHHHhhccccccccccccccc
Confidence 5667777887754 45666666666664 36666656532 3344445667889999999999999886544321
Q ss_pred -HHHHHH-HHHHHHHHHHHHHHccCCCCchhHHHHHHHHHhcccCCcchhhhcchHHHHHHHHHHHHHHHhCCCCCCCCC
Q psy3959 152 -RRQQVL-ERKRTEYWVFVKQYYDTDRDETYQDIYRQIHIDIPRMSPLMMLFQQKLVQEMFERILFIWAIRHPASGYVQG 229 (431)
Q Consensus 152 -~~~~~l-~~~~~~Y~~l~~~~~~~~~~~~~~~~~~qI~~Dv~Rt~p~~~~f~~~~~~~~L~rIL~~~a~~~p~igY~QG 229 (431)
..+... ......|....-.++. ...+.|++|+.|...+..+|.+....+. +++.++|..++-+-||.||
T Consensus 581 ~~~~d~~e~~~s~~y~~~l~~~~~--------~~~~~~~kd~e~~~~~~~~fs~~~~les-~~~~~~~~~~~l~~~~~~~ 651 (813)
T KOG1648|consen 581 DVFEDPNEPTCSQHYDRNLITLFR--------ANLHRIDKDVERCDRNLMFFSNKDNLES-RRVMYTYVRRNLEEGYTQG 651 (813)
T ss_pred chhcCCCccHHHHHHHHHHHHHHh--------hheeeecchhhhCcchheeecCCcchhh-heeeeeeeccccccccccc
Confidence 111111 1122345555444432 3457899999999999999998887777 7899999999999999999
Q ss_pred hhHHHHHHHHHHhhccCCCCCcccccccCCCchhhhhhhHHHHHHHHHHHHhhhhhhhccchhhHHHHHHHHHHHHHHhc
Q psy3959 230 INDLVTPFFVVFLQEFLPVGTDLEQLDLSTLPKEQRDIIEADSFCCLSKFLDGIQDNYIFAQLGIQQKVNQLKDLIQRID 309 (431)
Q Consensus 230 m~~iva~ll~v~~~~~~~~~~~~~~~~~~~~~~e~~~~iE~daF~~l~~ll~~~~~~f~~~~~~i~~~~~~l~~ll~~~d 309 (431)
|.|+.+|++..|.++. .+--|+.-+|-.-++.|.. .++...-+-.+. +++-.+
T Consensus 652 ~~dl~~p~~~~~ed~~-------------------------~~~e~~s~~~~~q~~~~~q-~~~~~~~l~~~r-~~~v~~ 704 (813)
T KOG1648|consen 652 MCDLLAPLLVTFEDEA-------------------------LTLECFSLLMLRQRGKFPQ-RPGMSKCLLNLR-LIQVVD 704 (813)
T ss_pred hhhccCCcCCChhhcc-------------------------cccCCCcHHHHHhcccCCC-CCCccccccccc-chhhhc
Confidence 9999999998777633 2333555555444444432 233332222222 344444
Q ss_pred HHHHHHHHHcCCCc-chhhhhHHHHHhccCCChhhHHHHHHHHhcCCC--CchhHHHHHHHHHHHHHHHHHhccCCHHHH
Q psy3959 310 TNLHNHLLKHGVDY-LQFSFRWMNNLLTREVPLRCSIRLWDTYLAESD--DFAAFQLYVCAAFLLHWRQKLLRERDFQGL 386 (431)
Q Consensus 310 p~L~~hL~~~~v~~-~~f~~~W~~tlF~~~lp~~~~lRlWD~~l~eg~--~~~~fl~~v~~AiL~~~r~~Ll~~~d~~~l 386 (431)
| |.. .+++ +...|+|+..-|.++++.+++..+|........ .-..|-+++++|.--.+---|-..-|..++
T Consensus 705 ~-----l~s-~id~~qa~~f~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~~~~~~~t~~~~~t~~ 778 (813)
T KOG1648|consen 705 P-----LIS-DIDYAQALSFRWFLLDFKRELSYECTYKVWEVIWAAQRLRITDDFAIFFGLATTNYHDVLITNNFDYTDM 778 (813)
T ss_pred c-----hhc-chhhhhhcceeeeccCcccccCCCCcceeeEeeccccccccCcchhhhhhhHHHhhHHHHhhcccchHHH
Confidence 4 111 1222 235699999999999999999999988877531 011255677777744443333333567777
Q ss_pred HHHHhCCCC
Q psy3959 387 MLMLQNLPT 395 (431)
Q Consensus 387 l~~L~~lp~ 395 (431)
++|++..-.
T Consensus 779 i~~~~~~~e 787 (813)
T KOG1648|consen 779 IKFFNEMAE 787 (813)
T ss_pred HHHHHHHHh
Confidence 887765433
No 22
>PF14961 BROMI: Broad-minded protein
Probab=97.62 E-value=0.0015 Score=72.75 Aligned_cols=162 Identities=18% Similarity=0.274 Sum_probs=118.8
Q ss_pred HHHHHHHHHHHhCCCCCCCCChhHHHHHHHHHHhhccCCCCCcccccccCCCchhhhhhhHHHHHHHHHHHHhhh-----
Q psy3959 209 MFERILFIWAIRHPASGYVQGINDLVTPFFVVFLQEFLPVGTDLEQLDLSTLPKEQRDIIEADSFCCLSKFLDGI----- 283 (431)
Q Consensus 209 ~L~rIL~~~a~~~p~igY~QGm~~iva~ll~v~~~~~~~~~~~~~~~~~~~~~~e~~~~iE~daF~~l~~ll~~~----- 283 (431)
..-+|++.|..+++.-+| .|..-.|+.+++++..+ -+.+.-.+.++-.-+
T Consensus 1085 s~l~~~~~~~~~~~~~~y-~g~DWFvstvfli~~Gd------------------------~e~~~~fL~~fS~ll~Safl 1139 (1296)
T PF14961_consen 1085 SSLHILFEFIHFCLQGSY-PGHDWFVSTVFLIMLGD------------------------KERSLQFLQRFSRLLTSAFL 1139 (1296)
T ss_pred chhHHHhhhhcccCCCCC-CCchhHHHHHHHHHcCC------------------------hhHhHHHHHHHHHHHHHhHh
Confidence 334677777777776555 57777777777777653 222333333332221
Q ss_pred ---hhhh---ccc---hhhHH----HHHHHHHHHHHHhcHHHHHHHHHcCCCcchhhhhHHHHHhccCCChhhHHHHHHH
Q psy3959 284 ---QDNY---IFA---QLGIQ----QKVNQLKDLIQRIDTNLHNHLLKHGVDYLQFSFRWMNNLLTREVPLRCSIRLWDT 350 (431)
Q Consensus 284 ---~~~f---~~~---~~~i~----~~~~~l~~ll~~~dp~L~~hL~~~~v~~~~f~~~W~~tlF~~~lp~~~~lRlWD~ 350 (431)
+-.. .+. ..|+. -.+..++.+++...|.++.-|..-|..+.+.+.+|+..+|=+-+++..++.-.=+
T Consensus 1140 W~pRlh~s~~l~~~~~~s~i~p~~~~~~~~vE~ll~~E~P~V~saf~~sg~tpsqi~~rW~~QcFWnyldW~eI~~y~~~ 1219 (1296)
T PF14961_consen 1140 WPPRLHASIHLPVDTAESGIHPVYFCSCHYVEMLLKAELPLVFSAFRMSGFTPSQICQRWLSQCFWNYLDWPEICHYIAI 1219 (1296)
T ss_pred ccccccccccCCchhhhcCCCchhhhHHHHHHHHHHhhccHHHHHHHHcCCCHHHHHHHHHHHHhhhcCCHHHHHHHHHH
Confidence 1111 111 12222 2357789999999999999999999999999999999999999999888877777
Q ss_pred HhcCCCCchhHHHHHHHHHHHHHHHHHhccCCHHHHHHHHhCCCCCCC
Q psy3959 351 YLAESDDFAAFQLYVCAAFLLHWRQKLLRERDFQGLMLMLQNLPTSNW 398 (431)
Q Consensus 351 ~l~eg~~~~~fl~~v~~AiL~~~r~~Ll~~~d~~~ll~~L~~lp~~~~ 398 (431)
.+..|+. |.+|+|+|+|++.+++||+...-+++..||+.-+-..+
T Consensus 1220 cil~G~d---yqvY~~VailkHlq~~ilq~~q~q~L~~flke~~l~gF 1264 (1296)
T PF14961_consen 1220 CILYGPD---YQVYICVAILKHLQPEILQHTQTQDLQVFLKEEALRGF 1264 (1296)
T ss_pred HHhcCcc---ceeehhHHHHHHhhHHHHHhhhhchHHHHhhhccccce
Confidence 7777877 78999999999999999987777888889988776654
No 23
>KOG1092|consensus
Probab=93.45 E-value=0.0079 Score=60.20 Aligned_cols=72 Identities=11% Similarity=-0.195 Sum_probs=62.2
Q ss_pred ccCCCCchhHHHHHHHHHhcccCCcchhhhcchHHHHHHHHHHHHHHHhCCCCCCCCChhHHHHHHHHHHhh
Q psy3959 172 YDTDRDETYQDIYRQIHIDIPRMSPLMMLFQQKLVQEMFERILFIWAIRHPASGYVQGINDLVTPFFVVFLQ 243 (431)
Q Consensus 172 ~~~~~~~~~~~~~~qI~~Dv~Rt~p~~~~f~~~~~~~~L~rIL~~~a~~~p~igY~QGm~~iva~ll~v~~~ 243 (431)
.+...+.-.+-.++++..+..++.+..+.+++.-.+-....+++..|..++.-++.++.+++|+++..++..
T Consensus 237 ~~~~~d~~rQI~id~prm~p~~~l~q~~~vq~~lerIl~iwairhpAsGyvqgindlvtpf~vvfl~e~l~~ 308 (484)
T KOG1092|consen 237 GDEDQDTWRQIPIDIPRMNPHIPLFQQKIVQEMLERILYIWAIRHPASGYVQGINDLVTPFFVVFLSEYLGP 308 (484)
T ss_pred ccccCccccccccCCCCCCccccchhhHHHHHHHHHHHHHHHHhcccccccccceeeechhhhhhhHhhcCc
Confidence 445566667777889999999999999999888777778899999999999999999999999999887766
No 24
>KOG2197|consensus
Probab=83.40 E-value=1.1 Score=47.18 Aligned_cols=67 Identities=21% Similarity=0.331 Sum_probs=47.1
Q ss_pred HHHHHHHhccCCCC--HHHH-HHHHHCCCCCCcHHHHHHHhhCCCCCC--hHHHHHHHHHHHHHHHHHHHHH
Q psy3959 105 IAKFNALLNLNLLN--LEEL-RSLAWSGIPNQVRPDAWRLLAGYLPTS--SERRQQVLERKRTEYWVFVKQY 171 (431)
Q Consensus 105 ~~k~~~ll~~~~~d--~~~L-~~l~~~GIP~~~R~~vW~~Llg~lp~~--~~~~~~~l~~~~~~Y~~l~~~~ 171 (431)
.++|+..+..+... ..++ +....+||++.+|+.+|..|+|.++.+ .+.+.......+..|..+..+-
T Consensus 50 ~~~~~~~f~~~~~~~~~~~~l~~i~~~gi~psir~evw~fll~~y~~~~~~~~~~~~r~~~~~~~~~l~~~c 121 (488)
T KOG2197|consen 50 PEKWQANFDPDGRLSGFVKLLKLIILGGIDPSIRGEVWEFLLGCYDLDSTFEERNQLRVARRPQYNELLLVC 121 (488)
T ss_pred hhhhhhccCCCccccchhhhheeeecCCCCCcccchhHHHHhcccCCCCchHHHHHHHhhcccchHHHHHHc
Confidence 46677777653322 2333 333457999999999999999998875 4666666667778888887763
No 25
>KOG2224|consensus
Probab=73.02 E-value=1.3 Score=44.72 Aligned_cols=30 Identities=23% Similarity=0.428 Sum_probs=20.8
Q ss_pred CCCchhhhhhh--HHHHHHHHHHHHhhhhhhh
Q psy3959 258 STLPKEQRDII--EADSFCCLSKFLDGIQDNY 287 (431)
Q Consensus 258 ~~~~~e~~~~i--E~daF~~l~~ll~~~~~~f 287 (431)
+++-..++..| |.++||||+.||.++.+.-
T Consensus 545 sdllapvlcevqnesetfwcfvglmqgmsdlv 576 (781)
T KOG2224|consen 545 SDLLAPVLCEVQNESETFWCFVGLMQGMSDLV 576 (781)
T ss_pred hhhcchhhhhhccccchhhhhhhhhccchhhh
Confidence 34444455333 9999999999998866553
No 26
>PF08109 Antimicrobial14: Lactocin 705 family; InterPro: IPR012517 This family consists of lactocin 705 which is a bacteriocin produced by Lactobacillus casei CRL 705. Lactocin 705 is a class IIb bacteriocin, whose activity depends upon the complementation of two peptides (705-alpha and 705-beta) of 33 amino acid residues each. Lactocin 705 is active against several Gram-positive bacteria, including food-borne pathogens and is a good candidate to be used for biopreservation of fermented meats [].
Probab=47.63 E-value=14 Score=22.27 Aligned_cols=15 Identities=47% Similarity=1.026 Sum_probs=11.8
Q ss_pred CCCCCChhHHHHHHH
Q psy3959 224 SGYVQGINDLVTPFF 238 (431)
Q Consensus 224 igY~QGm~~iva~ll 238 (431)
.||.||+.+..--.+
T Consensus 3 sgyiqgipdflkgyl 17 (31)
T PF08109_consen 3 SGYIQGIPDFLKGYL 17 (31)
T ss_pred cccccccHHHHHHHH
Confidence 699999998766544
No 27
>PF10815 ComZ: ComZ; InterPro: IPR024558 ComZ, which contains a leucine zipper motif, negatively regulates transcription of the ComG operon [].
Probab=43.71 E-value=50 Score=23.53 Aligned_cols=40 Identities=15% Similarity=0.205 Sum_probs=34.5
Q ss_pred HHHHHHHHhcHHHHHHHHHcCCCcchhhhhHHHHHhccCC
Q psy3959 300 QLKDLIQRIDTNLHNHLLKHGVDYLQFSFRWMNNLLTREV 339 (431)
Q Consensus 300 ~l~~ll~~~dp~L~~hL~~~~v~~~~f~~~W~~tlF~~~l 339 (431)
.|.++-.++.|+--..|++.||+...-.+.=+++||+...
T Consensus 5 ~FmqIaMK~lPEak~~L~k~GIeLsme~~qP~m~L~~~VM 44 (56)
T PF10815_consen 5 EFMQIAMKYLPEAKEELDKKGIELSMEMLQPLMQLLTKVM 44 (56)
T ss_pred HHHHHHHHHhHHHHHHHHHcCccCCHHHHHHHHHHHHHHH
Confidence 4667778899999999999999999988999999998754
No 28
>cd00248 Mth938-like Mth938-like domain. The members of this family include: Mth938, 2P1, Xcr35, Rpa2829, and several uncharacterized sequences. Mth938 is a hypothetical protein encoded by the Methanobacterium thermoautotrophicum (Mth) genome. This protein crystallizes as a dimer, although it is monomeric in solution, with one disulfide bond in each monomer. 2P1 is a partially characterized nuclear protein which is homologous to E3-3 from rat and known to be alternately spliced. Xcr35 and Rpa2829 are hypothetical proteins of unknown function from the Xanthomonas campestris and Rhodopseudomonas palustris genomes, respectively, for which the crystal structures have been determined.
Probab=22.47 E-value=35 Score=28.10 Aligned_cols=38 Identities=16% Similarity=0.220 Sum_probs=32.9
Q ss_pred HhcHHHHHHHHHcCCCcchhhhhHHHHHhccCCChhhHHHHHHHHhcCCCC
Q psy3959 307 RIDTNLHNHLLKHGVDYLQFSFRWMNNLLTREVPLRCSIRLWDTYLAESDD 357 (431)
Q Consensus 307 ~~dp~L~~hL~~~~v~~~~f~~~W~~tlF~~~lp~~~~lRlWD~~l~eg~~ 357 (431)
...|++.+.|.+.|+... .++....+|-|..++.||..
T Consensus 66 ~~~~~~~~~l~~~gI~vE-------------~m~T~aAcrTyNiL~~EgR~ 103 (109)
T cd00248 66 FLPRALRAALRAAGIGVE-------------VMSTGAACRTYNVLLSEGRR 103 (109)
T ss_pred cCCHHHHHHHHHcCCeEE-------------EeCcHHHHHHHHHHHhCCcc
Confidence 457899999999999877 47888999999999999875
No 29
>PF09597 IGR: IGR protein motif; InterPro: IPR019083 This entry is found in fungal and plant proteins and contains a conserved IGR motif. Its function is unknown.
Probab=21.98 E-value=1.1e+02 Score=22.27 Aligned_cols=31 Identities=26% Similarity=0.471 Sum_probs=20.9
Q ss_pred HHHHHH-HHHHhccCCCCHHHHHHHHHCCCCCCcHHHH
Q psy3959 102 SSKIAK-FNALLNLNLLNLEELRSLAWSGIPNQVRPDA 138 (431)
Q Consensus 102 ~~r~~k-~~~ll~~~~~d~~~L~~l~~~GIP~~~R~~v 138 (431)
.++.+. |.+++. .+..+|+.+ |||...|.-+
T Consensus 16 ~~kf~~~w~~lf~---~~s~~LK~~---GIp~r~Rryi 47 (57)
T PF09597_consen 16 AEKFESDWEKLFT---TSSKQLKEL---GIPVRQRRYI 47 (57)
T ss_pred HHHHHHHHHHHHh---cCHHHHHHC---CCCHHHHHHH
Confidence 344444 888874 466666654 9999888754
No 30
>PF07803 GSG-1: GSG1-like protein; InterPro: IPR012478 This family contains sequences bearing similarity to a region of GSG1 (Q9Z1H7 from SWISSPROT), a protein specifically expressed in testicular germ cells []. It is possible that over expression of the human homologue may be involved in tumourigenesis of human testicular germ cell tumours []. The region in question has four highly conserved cysteine residues.
Probab=21.64 E-value=56 Score=27.30 Aligned_cols=47 Identities=26% Similarity=0.536 Sum_probs=28.4
Q ss_pred cccccccCCCCCCCCCCCCC-------CCCCCCC-CCCCccHHHHhhccCcCCCCCCcccc
Q psy3959 7 KGFWKKNSHNVPGRPSPKKS-------VFSSSSQ-SNANSSFQAYQASISDAWVIDDDEFC 59 (431)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~-------~~~~~~~-~~~~~~~~~~~~~~~d~~~~~~~~~~ 59 (431)
++||=..++||| +|.+| |..+... +...++ =.+.|.-.|+.|||..+
T Consensus 28 sSyWC~GTqKVp---KPlC~~~~~~~Ci~~~~~~~~~~~~~---~~~~VqY~WETGDDkF~ 82 (118)
T PF07803_consen 28 SSYWCEGTQKVP---KPLCGKGKGTNCIHFPSNSDSGSNTS---DSNVVQYIWETGDDKFI 82 (118)
T ss_pred cccccccceecC---CCCCCccccCcCcCCCCCCcccccCC---CCceeEEEEecCCceee
Confidence 689999999998 45554 1111111 111111 23678889999999943
No 31
>PF12588 PSDC: Phophatidylserine decarboxylase ; InterPro: IPR022237 This domain family is found in bacteria and eukaryotes, and is approximately 140 amino acids in length. The family is found in association with PF02666 from PFAM. Phosphatidylserine decarboxylase (PSD) is an important enzyme in the synthesis of phosphatidylethanolamine in both prokaryotes and eukaryotes.
Probab=20.29 E-value=1e+02 Score=26.74 Aligned_cols=36 Identities=25% Similarity=0.258 Sum_probs=27.5
Q ss_pred ccCCcchhhhcchHHHHHHHHHHHHHHHh--CCCCCCC
Q psy3959 192 PRMSPLMMLFQQKLVQEMFERILFIWAIR--HPASGYV 227 (431)
Q Consensus 192 ~Rt~p~~~~f~~~~~~~~L~rIL~~~a~~--~p~igY~ 227 (431)
--|--...+|..+.+-+.|++||..|+.+ .|++.|+
T Consensus 84 M~T~sG~a~F~~p~vN~~lK~ILn~W~~fL~sp~S~~v 121 (141)
T PF12588_consen 84 MGTPSGYAFFLDPDVNAQLKKILNEWGEFLSSPASRSV 121 (141)
T ss_pred ccChHHHHHHcCHHHHHHHHHHHHHHHHHcCChhhhcc
Confidence 34555677888888889999999999975 4555554
Done!