Your job contains 1 sequence.
>psy396
MSISGGDWSARNKLKAYEGVYCLAIRQYCRAAELFVDVVPTFESYELAEFGTIIRYTVLA
CMIALPRYNLRKKLMHHGVMAQALHSQYRDLREYFVSLYDGHYFEFLKCLAAVEQDMKRD
PLLNPHYRHYVQEMRLRAYKQILQAYRSLSLKYMAQCFGVSVEFIEKEVARFAAAGRLQC
KIDSVAGNVVTTSHISEKGDCRSEAPEASLDRGILYQTTVKRGDIFLNRLKKLARVIDF
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy396
(239 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
ZFIN|ZDB-GENE-040426-1038 - symbol:psmd6 "proteasome (pro... 580 2.5e-56 1
UNIPROTKB|F1N903 - symbol:PSMD6 "Uncharacterized protein"... 578 4.2e-56 1
UNIPROTKB|F1MXE4 - symbol:PSMD6 "26S proteasome non-ATPas... 574 1.1e-55 1
UNIPROTKB|C9IZE4 - symbol:PSMD6 "Proteasome (Prosome, mac... 574 1.1e-55 1
UNIPROTKB|Q15008 - symbol:PSMD6 "26S proteasome non-ATPas... 574 1.1e-55 1
UNIPROTKB|Q6UV22 - symbol:PSMD6 "KIAA0107 isoform" specie... 574 1.1e-55 1
RGD|735127 - symbol:Psmd6 "proteasome (prosome, macropain... 574 1.1e-55 1
UNIPROTKB|E2RN00 - symbol:PSMD6 "Uncharacterized protein"... 573 1.4e-55 1
MGI|MGI:1913663 - symbol:Psmd6 "proteasome (prosome, macr... 570 2.9e-55 1
UNIPROTKB|Q3T0B2 - symbol:PSMD6 "26S proteasome non-ATPas... 567 6.1e-55 1
FB|FBgn0028688 - symbol:Rpn7 "Regulatory particle non-ATP... 540 4.4e-52 1
TAIR|locus:2126798 - symbol:AT4G24820 "AT4G24820" species... 473 5.6e-45 1
WB|WBGene00004463 - symbol:rpn-7 species:6239 "Caenorhabd... 436 4.6e-41 1
GENEDB_PFALCIPARUM|PF11_0303 - symbol:PF11_0303 "26S prot... 423 1.1e-39 1
DICTYBASE|DDB_G0270188 - symbol:psmD6 "26S proteasome non... 418 3.7e-39 1
POMBASE|SPBC582.07c - symbol:rpn7 "19S proteasome regulat... 393 1.7e-36 1
ASPGD|ASPL0000043868 - symbol:AN1922 species:162425 "Emer... 230 9.0e-35 2
CGD|CAL0003998 - symbol:RPN7 species:5476 "Candida albica... 309 1.3e-27 1
SGD|S000006312 - symbol:RPN7 "non-ATPase regulatory subun... 309 1.3e-27 1
TAIR|locus:2098851 - symbol:FUS6 "FUSCA 6" species:3702 "... 156 4.0e-09 1
UNIPROTKB|F1MP10 - symbol:GPS1 "Uncharacterized protein" ... 153 1.1e-08 1
UNIPROTKB|F1P996 - symbol:GPS1 "Uncharacterized protein" ... 150 2.3e-08 1
DICTYBASE|DDB_G0283587 - symbol:csn1 "COP9 signalosome co... 150 2.5e-08 1
MGI|MGI:2384801 - symbol:Gps1 "G protein pathway suppress... 150 2.6e-08 1
UNIPROTKB|F1NB10 - symbol:GPS1 "Uncharacterized protein" ... 150 2.8e-08 1
UNIPROTKB|F1NJQ7 - symbol:GPS1 "Uncharacterized protein" ... 150 2.8e-08 1
RGD|621532 - symbol:Gps1 "G protein pathway suppressor 1"... 149 3.6e-08 1
ZFIN|ZDB-GENE-041111-240 - symbol:gps1 "G protein pathway... 147 6.6e-08 1
UNIPROTKB|C9JFE4 - symbol:GPS1 "G protein pathway suppres... 143 1.9e-07 1
UNIPROTKB|Q13098 - symbol:GPS1 "COP9 signalosome complex ... 143 2.1e-07 1
FB|FBgn0027057 - symbol:CSN1b "COP9 complex homolog subun... 129 1.1e-05 1
>ZFIN|ZDB-GENE-040426-1038 [details] [associations]
symbol:psmd6 "proteasome (prosome, macropain) 26S
subunit, non-ATPase, 6" species:7955 "Danio rerio" [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0070306 "lens fiber cell differentiation"
evidence=IMP] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
ZFIN:ZDB-GENE-040426-1038 GO:GO:0043161 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0000502 GO:GO:0070306 eggNOG:COG5187
InterPro:IPR019585 Pfam:PF10602 HOGENOM:HOG000214998 KO:K03037
CTD:9861 HOVERGEN:HBG023924 OrthoDB:EOG4DV5MB EMBL:BC049452
EMBL:BC153637 IPI:IPI00501573 RefSeq:NP_956585.1 UniGene:Dr.84195
STRING:Q7ZWE5 GeneID:393261 KEGG:dre:393261 InParanoid:Q7ZWE5
NextBio:20814320 Uniprot:Q7ZWE5
Length = 386
Score = 580 (209.2 bits), Expect = 2.5e-56, P = 2.5e-56
Identities = 118/234 (50%), Positives = 164/234 (70%)
Query: 5 GGDWSARNKLKAYEGVYCLAIRQYCRAAELFVDVVPTFESYELAEFGTIIRYTVLACMIA 64
GGDW RN+LK Y+G+YC+AIR + +AAELF+D V TF SYEL ++ T + YTV CMIA
Sbjct: 168 GGDWDRRNRLKVYQGLYCVAIRDFKQAAELFLDTVSTFTSYELMDYKTFVTYTVYVCMIA 227
Query: 65 LPRYNLRKKLMHHGVMAQALHSQYRDLREYFVSLYDGHYFEFLKCLAAVEQDMKRDPLLN 124
L R +LR+K++ + + LHS +R+Y SLY+ Y F + LA VEQ+MK+D L
Sbjct: 228 LKRPDLREKVIKGAEILEVLHS-LPAVRQYLFSLYECRYSVFFQSLARVEQEMKQDWLFA 286
Query: 125 PHYRHYVQEMRLRAYKQILQAYRSLSLKYMAQCFGVSVEFIEKEVARFAAAGRLQCKIDS 184
PHYR+YV+EMR+ AY Q+L++YRSL+L YMA+ FGVS EFI++E++RF AAGRL CKID
Sbjct: 287 PHYRYYVREMRILAYSQLLESYRSLTLGYMAEAFGVSTEFIDQELSRFIAAGRLHCKIDK 346
Query: 185 VAGNVVTTSHISEKGDCRSEAPEASLDRGILYQTTVKRGDIFLNRLKKLARVID 238
V +V T+ P++ + YQ T+K+GD+ LNR++KL+RVI+
Sbjct: 347 V-NEIVETNR-----------PDS---KNWQYQETIKKGDLLLNRVQKLSRVIN 385
>UNIPROTKB|F1N903 [details] [associations]
symbol:PSMD6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR000717 Pfam:PF01399 SMART:SM00088 Gene3D:1.10.10.10
InterPro:IPR011991 InterPro:IPR019585 Pfam:PF10602
GeneTree:ENSGT00510000046608 OMA:YTVYVCM EMBL:AADN02014237
IPI:IPI00601017 Ensembl:ENSGALT00000011836 Uniprot:F1N903
Length = 398
Score = 578 (208.5 bits), Expect = 4.2e-56, P = 4.2e-56
Identities = 118/234 (50%), Positives = 164/234 (70%)
Query: 5 GGDWSARNKLKAYEGVYCLAIRQYCRAAELFVDVVPTFESYELAEFGTIIRYTVLACMIA 64
GGDW RN+LK Y+G+YC+AIR + +AAELF+D V TF SYEL ++ T + YTV MIA
Sbjct: 180 GGDWDRRNRLKVYQGLYCVAIRDFKQAAELFLDTVSTFTSYELMDYKTFVTYTVYVSMIA 239
Query: 65 LPRYNLRKKLMHHGVMAQALHSQYRDLREYFVSLYDGHYFEFLKCLAAVEQDMKRDPLLN 124
L R +LR+K++ + + LHS +R+Y SLY+ Y F + LA VEQ+MK+D L
Sbjct: 240 LDRPDLREKVIKGAEILEVLHS-LPAVRQYLFSLYECRYAAFFQSLAIVEQEMKKDWLFA 298
Query: 125 PHYRHYVQEMRLRAYKQILQAYRSLSLKYMAQCFGVSVEFIEKEVARFAAAGRLQCKIDS 184
PHYR+YV+EMR+ AY Q+L++YRSL+L YMA+ FGVSVEFI++E++RF AAGRL CKID
Sbjct: 299 PHYRYYVREMRIHAYSQLLESYRSLTLGYMAEAFGVSVEFIDQELSRFIAAGRLHCKIDK 358
Query: 185 VAGNVVTTSHISEKGDCRSEAPEASLDRGILYQTTVKRGDIFLNRLKKLARVID 238
V +V T+ P++ + YQ T+K+GD+ LNR++KL+RVI+
Sbjct: 359 V-NEIVETNR-----------PDS---KNWQYQETIKKGDLLLNRVQKLSRVIN 397
>UNIPROTKB|F1MXE4 [details] [associations]
symbol:PSMD6 "26S proteasome non-ATPase regulatory subunit
6" species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 Gene3D:1.10.10.10 InterPro:IPR011991
InterPro:IPR019585 Pfam:PF10602 GeneTree:ENSGT00510000046608
OMA:YTVYVCM IPI:IPI00697833 UniGene:Bt.3193 EMBL:DAAA02054147
Ensembl:ENSBTAT00000020108 Uniprot:F1MXE4
Length = 389
Score = 574 (207.1 bits), Expect = 1.1e-55, P = 1.1e-55
Identities = 118/234 (50%), Positives = 163/234 (69%)
Query: 5 GGDWSARNKLKAYEGVYCLAIRQYCRAAELFVDVVPTFESYELAEFGTIIRYTVLACMIA 64
GGDW RN+LK Y+G+YC+AIR + +AAELF+D V TF SYEL ++ T + YTV MIA
Sbjct: 171 GGDWDRRNRLKVYQGLYCVAIRDFKQAAELFLDTVSTFTSYELMDYKTFVTYTVYVSMIA 230
Query: 65 LPRYNLRKKLMHHGVMAQALHSQYRDLREYFVSLYDGHYFEFLKCLAAVEQDMKRDPLLN 124
L R +LR+K++ + + LHS +R+Y SLY+ Y F + LA VEQ+MK+D L
Sbjct: 231 LERPDLREKVIKGAEILEVLHS-LPAVRQYLFSLYECRYSVFFQSLAIVEQEMKKDWLFA 289
Query: 125 PHYRHYVQEMRLRAYKQILQAYRSLSLKYMAQCFGVSVEFIEKEVARFAAAGRLQCKIDS 184
PHYR+YV+EMR+ AY Q+L++YRSL+L YMA+ FGV VEFI++E++RF AAGRL CKID
Sbjct: 290 PHYRYYVREMRIHAYSQLLESYRSLTLGYMAEAFGVGVEFIDQELSRFIAAGRLHCKIDK 349
Query: 185 VAGNVVTTSHISEKGDCRSEAPEASLDRGILYQTTVKRGDIFLNRLKKLARVID 238
V VV T+ P++ + YQ T+K+GD+ LNR++KL+RVI+
Sbjct: 350 V-NEVVETNR-----------PDS---KNWQYQETIKKGDLLLNRVQKLSRVIN 388
>UNIPROTKB|C9IZE4 [details] [associations]
symbol:PSMD6 "Proteasome (Prosome, macropain) 26S subunit,
non-ATPase, 6, isoform CRA_b" species:9606 "Homo sapiens"
[GO:0000502 "proteasome complex" evidence=IEA] InterPro:IPR000717
Pfam:PF01399 SMART:SM00088 EMBL:CH471055 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0000502 EMBL:AC012557 InterPro:IPR019585
Pfam:PF10602 HOGENOM:HOG000214998 OMA:YTVYVCM OrthoDB:EOG4DV5MB
UniGene:Hs.152536 GeneID:9861 HGNC:HGNC:9564 ChiTaRS:PSMD6
IPI:IPI00793381 RefSeq:NP_001258708.1 STRING:C9IZE4
Ensembl:ENST00000492933 UCSC:uc003dmb.1 Uniprot:C9IZE4
Length = 442
Score = 574 (207.1 bits), Expect = 1.1e-55, P = 1.1e-55
Identities = 117/234 (50%), Positives = 163/234 (69%)
Query: 5 GGDWSARNKLKAYEGVYCLAIRQYCRAAELFVDVVPTFESYELAEFGTIIRYTVLACMIA 64
GGDW RN+LK Y+G+YC+AIR + +AAELF+D V TF SYEL ++ T + YTV MIA
Sbjct: 224 GGDWDRRNRLKVYQGLYCVAIRDFKQAAELFLDTVSTFTSYELMDYKTFVTYTVYVSMIA 283
Query: 65 LPRYNLRKKLMHHGVMAQALHSQYRDLREYFVSLYDGHYFEFLKCLAAVEQDMKRDPLLN 124
L R +LR+K++ + + LHS +R+Y SLY+ Y F + LA VEQ+MK+D L
Sbjct: 284 LERPDLREKVIKGAEILEVLHS-LPAVRQYLFSLYECRYSVFFQSLAVVEQEMKKDWLFA 342
Query: 125 PHYRHYVQEMRLRAYKQILQAYRSLSLKYMAQCFGVSVEFIEKEVARFAAAGRLQCKIDS 184
PHYR+YV+EMR+ AY Q+L++YRSL+L YMA+ FGV VEFI++E++RF AAGRL CKID
Sbjct: 343 PHYRYYVREMRIHAYSQLLESYRSLTLGYMAEAFGVGVEFIDQELSRFIAAGRLHCKIDK 402
Query: 185 VAGNVVTTSHISEKGDCRSEAPEASLDRGILYQTTVKRGDIFLNRLKKLARVID 238
V +V T+ P++ + YQ T+K+GD+ LNR++KL+RVI+
Sbjct: 403 V-NEIVETNR-----------PDS---KNWQYQETIKKGDLLLNRVQKLSRVIN 441
>UNIPROTKB|Q15008 [details] [associations]
symbol:PSMD6 "26S proteasome non-ATPase regulatory subunit
6" species:9606 "Homo sapiens" [GO:0006508 "proteolysis"
evidence=NAS] [GO:0000502 "proteasome complex" evidence=NAS]
[GO:0016887 "ATPase activity" evidence=NAS] [GO:0022624 "proteasome
accessory complex" evidence=ISS] [GO:0000075 "cell cycle
checkpoint" evidence=TAS] [GO:0000082 "G1/S transition of mitotic
cell cycle" evidence=TAS] [GO:0000084 "S phase of mitotic cell
cycle" evidence=TAS] [GO:0000209 "protein polyubiquitination"
evidence=TAS] [GO:0000216 "M/G1 transition of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0002474 "antigen processing and presentation of peptide antigen
via MHC class I" evidence=TAS] [GO:0002479 "antigen processing and
presentation of exogenous peptide antigen via MHC class I,
TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0006200 "ATP catabolic process" evidence=NAS]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR000717 Pfam:PF01399 SMART:SM00088 GO:GO:0005829
Reactome:REACT_111102 Reactome:REACT_116125 Reactome:REACT_6900
GO:GO:0006915 GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 EMBL:CH471055 GO:GO:0000082
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016887 GO:GO:0051436
GO:GO:0000216 GO:GO:0000209 GO:GO:0000084 GO:GO:0031145
GO:GO:0051437 GO:GO:0006521 Reactome:REACT_383 eggNOG:COG5187
InterPro:IPR019585 Pfam:PF10602 GO:GO:0022624 HOGENOM:HOG000214998
KO:K03037 CTD:9861 HOVERGEN:HBG023924 OrthoDB:EOG4DV5MB
EMBL:AF215935 EMBL:AF530062 EMBL:AY568086 EMBL:D14663 EMBL:AK290205
EMBL:BC000630 EMBL:BC000904 EMBL:BC012369 IPI:IPI00014151
RefSeq:NP_055629.1 UniGene:Hs.152536 ProteinModelPortal:Q15008
DIP:DIP-27590N IntAct:Q15008 MINT:MINT-5004632 STRING:Q15008
PhosphoSite:Q15008 DMDM:2494625 PaxDb:Q15008 PRIDE:Q15008
Ensembl:ENST00000295901 GeneID:9861 KEGG:hsa:9861 UCSC:uc003dlz.1
GeneCards:GC03M063973 HGNC:HGNC:9564 HPA:HPA036922
neXtProt:NX_Q15008 PharmGKB:PA33910 InParanoid:Q15008
PhylomeDB:Q15008 ChiTaRS:PSMD6 GenomeRNAi:9861 NextBio:37172
ArrayExpress:Q15008 Bgee:Q15008 CleanEx:HS_PSMD6
Genevestigator:Q15008 GermOnline:ENSG00000163636 Uniprot:Q15008
Length = 389
Score = 574 (207.1 bits), Expect = 1.1e-55, P = 1.1e-55
Identities = 117/234 (50%), Positives = 163/234 (69%)
Query: 5 GGDWSARNKLKAYEGVYCLAIRQYCRAAELFVDVVPTFESYELAEFGTIIRYTVLACMIA 64
GGDW RN+LK Y+G+YC+AIR + +AAELF+D V TF SYEL ++ T + YTV MIA
Sbjct: 171 GGDWDRRNRLKVYQGLYCVAIRDFKQAAELFLDTVSTFTSYELMDYKTFVTYTVYVSMIA 230
Query: 65 LPRYNLRKKLMHHGVMAQALHSQYRDLREYFVSLYDGHYFEFLKCLAAVEQDMKRDPLLN 124
L R +LR+K++ + + LHS +R+Y SLY+ Y F + LA VEQ+MK+D L
Sbjct: 231 LERPDLREKVIKGAEILEVLHS-LPAVRQYLFSLYECRYSVFFQSLAVVEQEMKKDWLFA 289
Query: 125 PHYRHYVQEMRLRAYKQILQAYRSLSLKYMAQCFGVSVEFIEKEVARFAAAGRLQCKIDS 184
PHYR+YV+EMR+ AY Q+L++YRSL+L YMA+ FGV VEFI++E++RF AAGRL CKID
Sbjct: 290 PHYRYYVREMRIHAYSQLLESYRSLTLGYMAEAFGVGVEFIDQELSRFIAAGRLHCKIDK 349
Query: 185 VAGNVVTTSHISEKGDCRSEAPEASLDRGILYQTTVKRGDIFLNRLKKLARVID 238
V +V T+ P++ + YQ T+K+GD+ LNR++KL+RVI+
Sbjct: 350 V-NEIVETNR-----------PDS---KNWQYQETIKKGDLLLNRVQKLSRVIN 388
>UNIPROTKB|Q6UV22 [details] [associations]
symbol:PSMD6 "KIAA0107 isoform" species:9606 "Homo sapiens"
[GO:0000502 "proteasome complex" evidence=IEA] InterPro:IPR000717
Pfam:PF01399 SMART:SM00088 EMBL:CH471055 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0000502 EMBL:AC012557 InterPro:IPR019585
Pfam:PF10602 HOGENOM:HOG000214998 HOVERGEN:HBG023924
OrthoDB:EOG4DV5MB UniGene:Hs.152536 GeneID:9861 HGNC:HGNC:9564
ChiTaRS:PSMD6 EMBL:AY359879 IPI:IPI00794383 RefSeq:NP_001258709.1
STRING:Q6UV22 Ensembl:ENST00000394431 UCSC:uc003dmd.1
Uniprot:Q6UV22
Length = 351
Score = 574 (207.1 bits), Expect = 1.1e-55, P = 1.1e-55
Identities = 117/234 (50%), Positives = 163/234 (69%)
Query: 5 GGDWSARNKLKAYEGVYCLAIRQYCRAAELFVDVVPTFESYELAEFGTIIRYTVLACMIA 64
GGDW RN+LK Y+G+YC+AIR + +AAELF+D V TF SYEL ++ T + YTV MIA
Sbjct: 133 GGDWDRRNRLKVYQGLYCVAIRDFKQAAELFLDTVSTFTSYELMDYKTFVTYTVYVSMIA 192
Query: 65 LPRYNLRKKLMHHGVMAQALHSQYRDLREYFVSLYDGHYFEFLKCLAAVEQDMKRDPLLN 124
L R +LR+K++ + + LHS +R+Y SLY+ Y F + LA VEQ+MK+D L
Sbjct: 193 LERPDLREKVIKGAEILEVLHS-LPAVRQYLFSLYECRYSVFFQSLAVVEQEMKKDWLFA 251
Query: 125 PHYRHYVQEMRLRAYKQILQAYRSLSLKYMAQCFGVSVEFIEKEVARFAAAGRLQCKIDS 184
PHYR+YV+EMR+ AY Q+L++YRSL+L YMA+ FGV VEFI++E++RF AAGRL CKID
Sbjct: 252 PHYRYYVREMRIHAYSQLLESYRSLTLGYMAEAFGVGVEFIDQELSRFIAAGRLHCKIDK 311
Query: 185 VAGNVVTTSHISEKGDCRSEAPEASLDRGILYQTTVKRGDIFLNRLKKLARVID 238
V +V T+ P++ + YQ T+K+GD+ LNR++KL+RVI+
Sbjct: 312 V-NEIVETNR-----------PDS---KNWQYQETIKKGDLLLNRVQKLSRVIN 350
>RGD|735127 [details] [associations]
symbol:Psmd6 "proteasome (prosome, macropain) 26S subunit,
non-ATPase, 6" species:10116 "Rattus norvegicus" [GO:0022624
"proteasome accessory complex" evidence=IEA;ISO] InterPro:IPR000717
Pfam:PF01399 SMART:SM00088 RGD:735127 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0000502 eggNOG:COG5187 InterPro:IPR019585
Pfam:PF10602 GeneTree:ENSGT00510000046608 HOGENOM:HOG000214998
KO:K03037 OMA:YTVYVCM CTD:9861 HOVERGEN:HBG023924 OrthoDB:EOG4DV5MB
EMBL:CH474010 EMBL:BC059159 IPI:IPI00189463 RefSeq:NP_942025.1
UniGene:Rn.103875 IntAct:Q6PCT9 STRING:Q6PCT9
Ensembl:ENSRNOT00000009249 GeneID:289924 KEGG:rno:289924
InParanoid:Q6PCT9 NextBio:630485 Genevestigator:Q6PCT9
Uniprot:Q6PCT9
Length = 389
Score = 574 (207.1 bits), Expect = 1.1e-55, P = 1.1e-55
Identities = 117/234 (50%), Positives = 163/234 (69%)
Query: 5 GGDWSARNKLKAYEGVYCLAIRQYCRAAELFVDVVPTFESYELAEFGTIIRYTVLACMIA 64
GGDW RN+LK Y+G+YC+AIR + +AAELF+D V TF SYEL ++ T + YTV MIA
Sbjct: 171 GGDWDRRNRLKVYQGLYCVAIRDFKQAAELFLDTVSTFTSYELMDYKTFVTYTVYVSMIA 230
Query: 65 LPRYNLRKKLMHHGVMAQALHSQYRDLREYFVSLYDGHYFEFLKCLAAVEQDMKRDPLLN 124
L R +LR+K++ + + LHS +R+Y SLY+ Y F + LA VEQ+MK+D L
Sbjct: 231 LERPDLREKVIKGAEILEVLHS-LPAVRQYLFSLYECRYSVFFQSLAVVEQEMKKDWLFA 289
Query: 125 PHYRHYVQEMRLRAYKQILQAYRSLSLKYMAQCFGVSVEFIEKEVARFAAAGRLQCKIDS 184
PHYR+YV+EMR+ AY Q+L++YRSL+L YMA+ FGV VEFI++E++RF AAGRL CKID
Sbjct: 290 PHYRYYVREMRIHAYSQLLESYRSLTLGYMAEAFGVGVEFIDQELSRFIAAGRLHCKIDK 349
Query: 185 VAGNVVTTSHISEKGDCRSEAPEASLDRGILYQTTVKRGDIFLNRLKKLARVID 238
V +V T+ P++ + YQ T+K+GD+ LNR++KL+RVI+
Sbjct: 350 V-NEIVETNR-----------PDS---KNWQYQETIKKGDLLLNRVQKLSRVIN 388
>UNIPROTKB|E2RN00 [details] [associations]
symbol:PSMD6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022624 "proteasome accessory complex"
evidence=IEA] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
Gene3D:1.10.10.10 InterPro:IPR011991 InterPro:IPR019585
Pfam:PF10602 GeneTree:ENSGT00510000046608 EMBL:AAEX03012146
Ensembl:ENSCAFT00000011009 OMA:HRARESH NextBio:20858788
Uniprot:E2RN00
Length = 516
Score = 573 (206.8 bits), Expect = 1.4e-55, P = 1.4e-55
Identities = 117/234 (50%), Positives = 163/234 (69%)
Query: 5 GGDWSARNKLKAYEGVYCLAIRQYCRAAELFVDVVPTFESYELAEFGTIIRYTVLACMIA 64
GGDW RN+LK Y+G+YC+AIR + +AAELF+D V TF SYEL ++ T + YTV MIA
Sbjct: 298 GGDWDRRNRLKVYQGLYCVAIRDFKQAAELFLDTVSTFTSYELMDYKTFVTYTVYVSMIA 357
Query: 65 LPRYNLRKKLMHHGVMAQALHSQYRDLREYFVSLYDGHYFEFLKCLAAVEQDMKRDPLLN 124
L R +LR+K++ + + LHS +R+Y SLY+ Y F + LA VEQ+MK+D L
Sbjct: 358 LERPDLREKVIKGAEILEVLHS-LPAVRQYLFSLYECRYSVFFQSLAIVEQEMKKDWLFA 416
Query: 125 PHYRHYVQEMRLRAYKQILQAYRSLSLKYMAQCFGVSVEFIEKEVARFAAAGRLQCKIDS 184
PHYR+YV+EMR+ AY Q+L++YRSL+L YMA+ FGV VEFI++E++RF AAGRL CKID
Sbjct: 417 PHYRYYVREMRIHAYSQLLESYRSLTLGYMAEAFGVGVEFIDQELSRFIAAGRLHCKIDK 476
Query: 185 VAGNVVTTSHISEKGDCRSEAPEASLDRGILYQTTVKRGDIFLNRLKKLARVID 238
V +V T+ P++ + YQ T+K+GD+ LNR++KL+RVI+
Sbjct: 477 V-NEIVETNR-----------PDS---KNWQYQETIKKGDLLLNRVQKLSRVIN 515
>MGI|MGI:1913663 [details] [associations]
symbol:Psmd6 "proteasome (prosome, macropain) 26S subunit,
non-ATPase, 6" species:10090 "Mus musculus" [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IDA] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
MGI:MGI:1913663 Gene3D:1.10.10.10 InterPro:IPR011991 eggNOG:COG5187
InterPro:IPR019585 Pfam:PF10602 GeneTree:ENSGT00510000046608
GO:GO:0022624 HOGENOM:HOG000214998 KO:K03037 OMA:YTVYVCM CTD:9861
HOVERGEN:HBG023924 OrthoDB:EOG4DV5MB EMBL:AJ252147 EMBL:AK010287
EMBL:BC006869 IPI:IPI00319965 RefSeq:NP_079826.2 UniGene:Mm.27591
ProteinModelPortal:Q99JI4 IntAct:Q99JI4 STRING:Q99JI4
PhosphoSite:Q99JI4 PaxDb:Q99JI4 PRIDE:Q99JI4 DNASU:66413
Ensembl:ENSMUST00000022256 GeneID:66413 KEGG:mmu:66413
UCSC:uc007sgj.1 InParanoid:Q99JI4 NextBio:321623 Bgee:Q99JI4
Genevestigator:Q99JI4 GermOnline:ENSMUSG00000021737 Uniprot:Q99JI4
Length = 389
Score = 570 (205.7 bits), Expect = 2.9e-55, P = 2.9e-55
Identities = 116/234 (49%), Positives = 163/234 (69%)
Query: 5 GGDWSARNKLKAYEGVYCLAIRQYCRAAELFVDVVPTFESYELAEFGTIIRYTVLACMIA 64
GGDW RN+LK Y+G+YC+AIR + +AAELF+D V TF SYEL ++ T + YTV MIA
Sbjct: 171 GGDWDRRNRLKVYQGLYCVAIRDFKQAAELFLDTVSTFTSYELMDYKTFVTYTVYVSMIA 230
Query: 65 LPRYNLRKKLMHHGVMAQALHSQYRDLREYFVSLYDGHYFEFLKCLAAVEQDMKRDPLLN 124
L R +LR+K++ + + LHS +R+Y SLY+ Y F + LA VEQ+MK+D L
Sbjct: 231 LERPDLREKVIKGAEILEVLHS-LPAVRQYLFSLYECRYSVFFQSLAIVEQEMKKDWLFA 289
Query: 125 PHYRHYVQEMRLRAYKQILQAYRSLSLKYMAQCFGVSVEFIEKEVARFAAAGRLQCKIDS 184
PHYR+YV+EMR+ AY Q+L++YRSL+L YMA+ FGV V+FI++E++RF AAGRL CKID
Sbjct: 290 PHYRYYVREMRIHAYSQLLESYRSLTLGYMAEAFGVGVDFIDQELSRFIAAGRLHCKIDK 349
Query: 185 VAGNVVTTSHISEKGDCRSEAPEASLDRGILYQTTVKRGDIFLNRLKKLARVID 238
V +V T+ P++ + YQ T+K+GD+ LNR++KL+RVI+
Sbjct: 350 V-NEIVETNR-----------PDS---KNWQYQETIKKGDLLLNRVQKLSRVIN 388
>UNIPROTKB|Q3T0B2 [details] [associations]
symbol:PSMD6 "26S proteasome non-ATPase regulatory subunit
6" species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 Gene3D:1.10.10.10 InterPro:IPR011991 eggNOG:COG5187
InterPro:IPR019585 Pfam:PF10602 GO:GO:0022624 HOGENOM:HOG000214998
KO:K03037 EMBL:BC102468 IPI:IPI00697833 RefSeq:NP_001029821.1
UniGene:Bt.3193 ProteinModelPortal:Q3T0B2 STRING:Q3T0B2
PRIDE:Q3T0B2 GeneID:538625 KEGG:bta:538625 CTD:9861
HOVERGEN:HBG023924 InParanoid:Q3T0B2 OrthoDB:EOG4DV5MB
NextBio:20877481 Uniprot:Q3T0B2
Length = 389
Score = 567 (204.7 bits), Expect = 6.1e-55, P = 6.1e-55
Identities = 117/234 (50%), Positives = 162/234 (69%)
Query: 5 GGDWSARNKLKAYEGVYCLAIRQYCRAAELFVDVVPTFESYELAEFGTIIRYTVLACMIA 64
GGDW RN+LK Y+G+YC+AIR + +AAELF+D V TF SYEL ++ T + YTV MIA
Sbjct: 171 GGDWDRRNRLKVYQGLYCVAIRDFKQAAELFLDTVSTFTSYELMDYKTFVTYTVYVSMIA 230
Query: 65 LPRYNLRKKLMHHGVMAQALHSQYRDLREYFVSLYDGHYFEFLKCLAAVEQDMKRDPLLN 124
L R +LR+K++ + + LHS +R+Y SLY+ Y F + LA VEQ+MK+D L
Sbjct: 231 LERPDLREKVIKGAEILEVLHS-LPAVRQYLFSLYECRYSVFFQSLAIVEQEMKKDWLFA 289
Query: 125 PHYRHYVQEMRLRAYKQILQAYRSLSLKYMAQCFGVSVEFIEKEVARFAAAGRLQCKIDS 184
PHYR+YV+EMR+ AY Q+L++YRSL+L YMA+ FGV VEFI++E++RF AAGRL CKID
Sbjct: 290 PHYRYYVREMRIHAYSQLLESYRSLTLGYMAEAFGVGVEFIDQELSRFIAAGRLHCKIDK 349
Query: 185 VAGNVVTTSHISEKGDCRSEAPEASLDRGILYQTTVKRGDIFLNRLKKLARVID 238
V VV T+ P++ + YQ T+K+G + LNR++KL+RVI+
Sbjct: 350 V-NEVVETNR-----------PDS---KNWQYQETIKKGGLLLNRVQKLSRVIN 388
>FB|FBgn0028688 [details] [associations]
symbol:Rpn7 "Regulatory particle non-ATPase 7" species:7227
"Drosophila melanogaster" [GO:0008541 "proteasome regulatory
particle, lid subcomplex" evidence=ISS;NAS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS;NAS;IDA] [GO:0006508
"proteolysis" evidence=ISS;NAS;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0009987 "cellular process"
evidence=IMP] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR000717 Pfam:PF01399 SMART:SM00088 EMBL:AE014297
GO:GO:0022008 GO:GO:0006508 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0004175 GO:GO:0008541 eggNOG:COG5187 InterPro:IPR019585
Pfam:PF10602 GeneTree:ENSGT00510000046608 BRENDA:3.4.25.1 KO:K03037
EMBL:AF145308 EMBL:AY052008 RefSeq:NP_651048.1 UniGene:Dm.3424
ProteinModelPortal:Q9V3G7 DIP:DIP-23841N IntAct:Q9V3G7
MINT:MINT-845287 STRING:Q9V3G7 PaxDb:Q9V3G7 PRIDE:Q9V3G7
EnsemblMetazoa:FBtr0084294 GeneID:42641 KEGG:dme:Dmel_CG5378
UCSC:CG5378-RA CTD:42641 FlyBase:FBgn0028688 InParanoid:Q9V3G7
OMA:PWYEHIC OrthoDB:EOG4XPNXD PhylomeDB:Q9V3G7 GenomeRNAi:42641
NextBio:829829 Bgee:Q9V3G7 GermOnline:CG5378 Uniprot:Q9V3G7
Length = 389
Score = 540 (195.1 bits), Expect = 4.4e-52, P = 4.4e-52
Identities = 109/234 (46%), Positives = 159/234 (67%)
Query: 5 GGDWSARNKLKAYEGVYCLAIRQYCRAAELFVDVVPTFESYELAEFGTIIRYTVLACMIA 64
GGDW RN+LK Y+GVY +A+R + AA F+D V TF SYEL ++ T +RYTV MIA
Sbjct: 171 GGDWDRRNRLKVYQGVYSVAVRDFKAAATFFLDTVSTFTSYELMDYPTFVRYTVYVAMIA 230
Query: 65 LPRYNLRKKLMHHGVMAQALHSQYRDLREYFVSLYDGHYFEFLKCLAAVEQDMKRDPLLN 124
LPR LR K++ + + LH D++++ SLY+ Y F LA VE+ ++ D L++
Sbjct: 231 LPRNELRDKVIKGSEIQEVLHG-LPDVKQFLFSLYNCQYENFYVHLAGVEKQLRLDYLIH 289
Query: 125 PHYRHYVQEMRLRAYKQILQAYRSLSLKYMAQCFGVSVEFIEKEVARFAAAGRLQCKIDS 184
PHYR+YV+EMR+ Y Q+L++YRSL+L+YMA+ FGV+VE+I++E+ARF AAGRL K+D
Sbjct: 290 PHYRYYVREMRILGYTQLLESYRSLTLQYMAESFGVTVEYIDQELARFIAAGRLHAKVDR 349
Query: 185 VAGNVVTTSHISEKGDCRSEAPEASLDRGILYQTTVKRGDIFLNRLKKLARVID 238
V G +V T+ P+ ++ YQ T+K+GD+ LNR++KL+RVI+
Sbjct: 350 VGG-IVETNR-----------PD---NKNWQYQATIKQGDLLLNRIQKLSRVIN 388
>TAIR|locus:2126798 [details] [associations]
symbol:AT4G24820 "AT4G24820" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008541
"proteasome regulatory particle, lid subcomplex" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005634 "nucleus" evidence=TAS] [GO:0030163 "protein catabolic
process" evidence=TAS] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0006888
"ER to Golgi vesicle-mediated transport" evidence=RCA] [GO:0009407
"toxin catabolic process" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009735 "response to
cytokinin stimulus" evidence=RCA] [GO:0010090 "trichome
morphogenesis" evidence=RCA] [GO:0010388 "cullin deneddylation"
evidence=RCA] [GO:0042023 "DNA endoreduplication" evidence=RCA]
[GO:0043090 "amino acid import" evidence=RCA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=RCA] [GO:0043248 "proteasome assembly" evidence=RCA]
[GO:0048767 "root hair elongation" evidence=RCA] [GO:0051302
"regulation of cell division" evidence=RCA] [GO:0051510 "regulation
of unidimensional cell growth" evidence=RCA] [GO:0051604 "protein
maturation" evidence=RCA] [GO:0051788 "response to misfolded
protein" evidence=RCA] [GO:0080129 "proteasome core complex
assembly" evidence=RCA] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 GO:GO:0005829 GO:GO:0005886 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0030163 GO:GO:0000502 EMBL:AL161562
EMBL:AL049657 eggNOG:COG5187 InterPro:IPR019585 Pfam:PF10602
EMBL:AY054500 EMBL:AY093269 EMBL:BT000653 EMBL:AY087847
IPI:IPI00520982 PIR:T06666 RefSeq:NP_567709.1 RefSeq:NP_974611.1
UniGene:At.3132 ProteinModelPortal:Q93Y35 IntAct:Q93Y35
STRING:Q93Y35 PaxDb:Q93Y35 PRIDE:Q93Y35 DNASU:828585
EnsemblPlants:AT4G24820.1 EnsemblPlants:AT4G24820.2 GeneID:828585
KEGG:ath:AT4G24820 TAIR:At4g24820 HOGENOM:HOG000214998
InParanoid:Q93Y35 KO:K03037 OMA:YTVYVCM PhylomeDB:Q93Y35
ProtClustDB:CLSN2689595 Genevestigator:Q93Y35 GermOnline:AT4G24820
Uniprot:Q93Y35
Length = 387
Score = 473 (171.6 bits), Expect = 5.6e-45, P = 5.6e-45
Identities = 99/234 (42%), Positives = 150/234 (64%)
Query: 5 GGDWSARNKLKAYEGVYCLAIRQYCRAAELFVDVVPTFESYELAEFGTIIRYTVLACMIA 64
GGDW +N+LK YEG+YC++ R + +AA LF+D + TF +YE+ + T I YTVL +I
Sbjct: 169 GGDWERKNRLKVYEGLYCMSTRNFKKAASLFLDSISTFTTYEIFPYETFIFYTVLTSIIT 228
Query: 65 LPRYNLRKKLMHHGVMAQALHSQYRDLREYFVSLYDGHYFEFLKCLAAVEQDMKRDPLLN 124
L R +L++K++ + L + L E+ SLY+ Y F A + +K D L
Sbjct: 229 LDRVSLKQKVVDAPEILTVL-GKIPFLSEFLNSLYECQYKAFFSAFAGMAVQIKYDRYLY 287
Query: 125 PHYRHYVQEMRLRAYKQILQAYRSLSLKYMAQCFGVSVEFIEKEVARFAAAGRLQCKIDS 184
PH+R Y++E+R Y Q L++Y+S++++ MA+ FGVSV+FI++E++RF AAG+L CKID
Sbjct: 288 PHFRFYMREVRTVVYSQFLESYKSVTVEAMAKAFGVSVDFIDQELSRFIAAGKLHCKIDK 347
Query: 185 VAGNVVTTSHISEKGDCRSEAPEASLDRGILYQTTVKRGDIFLNRLKKLARVID 238
VAG V+ T+ P+A + LYQ T+K+GD LNR++KL+RVID
Sbjct: 348 VAG-VLETNR-----------PDA---KNALYQATIKQGDFLLNRIQKLSRVID 386
>WB|WBGene00004463 [details] [associations]
symbol:rpn-7 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0018996 "molting
cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] InterPro:IPR000717
Pfam:PF01399 SMART:SM00088 GO:GO:0008340 GO:GO:0009792
GO:GO:0006915 GO:GO:0002119 GO:GO:0018996 GO:GO:0000003
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0000502 eggNOG:COG5187
InterPro:IPR019585 Pfam:PF10602 GeneTree:ENSGT00510000046608
HOGENOM:HOG000214998 KO:K03037 OMA:YTVYVCM EMBL:Z68227 PIR:T22413
RefSeq:NP_501632.1 ProteinModelPortal:Q20585 DIP:DIP-26993N
IntAct:Q20585 MINT:MINT-211626 STRING:Q20585 PaxDb:Q20585
EnsemblMetazoa:F49C12.8.1 EnsemblMetazoa:F49C12.8.2 GeneID:177753
KEGG:cel:CELE_F49C12.8 UCSC:F49C12.8 CTD:177753 WormBase:F49C12.8
InParanoid:Q20585 NextBio:898240 Uniprot:Q20585
Length = 410
Score = 436 (158.5 bits), Expect = 4.6e-41, P = 4.6e-41
Identities = 99/240 (41%), Positives = 145/240 (60%)
Query: 5 GGDWSARNKLKAYEGVYCLAIRQYCRAAELFVDVVPTFESYELAEFGTIIRYTVLACMIA 64
GGDW +N+L++YE +Y +++R + AA+LF++ VPTF SYEL + +I YTV+ A
Sbjct: 185 GGDWERKNRLRSYEALYRMSVRDFAGAADLFLEAVPTFGSYELMTYENLILYTVITTTFA 244
Query: 65 LPRYNLRKKLMH-HGVMAQ----ALHSQYRDLREYFVSLYDGHYFEFLKCLAAVEQD-MK 118
L R +LR K++ + V Q L+ +REY S YD HY F LAA+E + K
Sbjct: 245 LDRPDLRTKVIRCNEVQEQLTGGGLNGTLIPVREYLESYYDCHYDRFFIQLAALESERFK 304
Query: 119 RDPLLNPHYRHYVQEMRLRAYKQILQAYRSLSLKYMAQCFGVSVEFIEKEVARFAAAGRL 178
D L+PH+ +Y + MR RAY+Q L Y+++ + MA+ FGVS FI++E+ R A G+L
Sbjct: 305 FDRYLSPHFNYYSRGMRHRAYEQFLTPYKTVRIDMMAKDFGVSRAFIDRELHRLIATGQL 364
Query: 179 QCKIDSVAGNVVTTSHISEKGDCRSEAPEASLDRGILYQTTVKRGDIFLNRLKKLARVID 238
QC+ID+V G V+ +H K LY+ +K GDI LNR++KLARVI+
Sbjct: 365 QCRIDAVNG-VIEVNHRDSKNH--------------LYKAVIKDGDILLNRIQKLARVIN 409
>GENEDB_PFALCIPARUM|PF11_0303 [details] [associations]
symbol:PF11_0303 "26S proteasome regulatory
complex subunit, putative" species:5833 "Plasmodium falciparum"
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0000502
"proteasome complex" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0000502 EMBL:AE014186
InterPro:IPR019585 Pfam:PF10602 HOGENOM:HOG000214998 KO:K03037
ProtClustDB:CLSZ2444089 RefSeq:XP_001347974.2
ProteinModelPortal:Q8II71 IntAct:Q8II71 MINT:MINT-1646226
PRIDE:Q8II71 EnsemblProtists:PF11_0303:mRNA GeneID:810850
KEGG:pfa:PF11_0303 EuPathDB:PlasmoDB:PF3D7_1129200 Uniprot:Q8II71
Length = 393
Score = 423 (154.0 bits), Expect = 1.1e-39, P = 1.1e-39
Identities = 91/234 (38%), Positives = 136/234 (58%)
Query: 5 GGDWSARNKLKAYEGVYCLAIRQYCRAAELFVDVVPTFESYELAEFGTIIRYTVLACMIA 64
GGDW +NKLK YE + + IR + A+++ +D TF + E+ + II Y V+ ++
Sbjct: 175 GGDWERKNKLKIYEALNYIMIRNFAEASKILIDAASTFTATEIISYEKIIFYVVILGIMT 234
Query: 65 LPRYNLRKKLMHHGVMAQALHSQYRDLREYFVSLYDGHYFEFLKCLAAVEQDMKRDPLLN 124
R L KK+++ V+ Q S DL Y S Y Y F++ + +KRD L
Sbjct: 235 EERTVLDKKILNSSVILQITSSD-EDLHTYLHSFYHCDYRTFMEKTIKIAMRVKRDRYLG 293
Query: 125 PHYRHYVQEMRLRAYKQILQAYRSLSLKYMAQCFGVSVEFIEKEVARFAAAGRLQCKIDS 184
HYR++++ R+RAYKQ L+ +++++LK MA FGVS EFIE E++ F A G+L CKID
Sbjct: 294 RHYRYFIRNTRVRAYKQFLEPFKNVTLKNMAFAFGVSEEFIENEISSFIANGKLNCKIDK 353
Query: 185 VAGNVVTTSHISEKGDCRSEAPEASLDRGILYQTTVKRGDIFLNRLKKLARVID 238
V G++ S P +R +YQ T+K+GDI LNR++KL+RVID
Sbjct: 354 VNGSI------------ESNQPN---ERNTMYQNTIKKGDILLNRIQKLSRVID 392
>DICTYBASE|DDB_G0270188 [details] [associations]
symbol:psmD6 "26S proteasome non-ATPase regulatory
subunit 6" species:44689 "Dictyostelium discoideum" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0005198 "structural molecule activity" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 dictyBase:DDB_G0270188 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0005198 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0000502 GO:GO:0006511 eggNOG:COG5187
InterPro:IPR019585 Pfam:PF10602 KO:K03037 OMA:YTVYVCM
RefSeq:XP_646606.1 ProteinModelPortal:Q55C75 STRING:Q55C75
PRIDE:Q55C75 EnsemblProtists:DDB0232985 GeneID:8617578
KEGG:ddi:DDB_G0270188 ProtClustDB:CLSZ2444089 Uniprot:Q55C75
Length = 382
Score = 418 (152.2 bits), Expect = 3.7e-39, P = 3.7e-39
Identities = 89/234 (38%), Positives = 144/234 (61%)
Query: 5 GGDWSARNKLKAYEGVYCLAIRQYCRAAELFVDVVPTFESYELAEFGTIIRYTVLACMIA 64
GGDW +N+LK YE VY ++IRQ+ A++L+++ V +F S E ++ I+Y + ++
Sbjct: 164 GGDWDRKNRLKTYEAVYKMSIRQFKEASDLYLETVASFTSTEFIDYSRFIQYLIFTSLLH 223
Query: 65 LPRYNLRKKLMHHGVMAQALHSQYRDLREYFVSLYDGHYFEFLKCLAAVEQDMKRDPLLN 124
L R +L++K++ + ++ + L++ S Y+G Y F LA +K D L
Sbjct: 224 LDRVSLKQKVIDSPDVLSVINDTPK-LQDLLQSFYNGDYANFFGALAHFSDSIKGDRYLA 282
Query: 125 PHYRHYVQEMRLRAYKQILQAYRSLSLKYMAQCFGVSVEFIEKEVARFAAAGRLQCKIDS 184
H R + +EMR+ AY Q L++Y S+ L+ M+ FGVS +FI++E++RF AAGRL CKID
Sbjct: 283 EHSRFFTREMRILAYNQFLESYSSVKLESMSNQFGVSYDFIDRELSRFVAAGRLNCKIDK 342
Query: 185 VAGNVVTTSHISEKGDCRSEAPEASLDRGILYQTTVKRGDIFLNRLKKLARVID 238
V+G + TT RS+A + LY+TT+++GD LNR++KL+RVI+
Sbjct: 343 VSGVIETT---------RSDA------KNHLYKTTLQQGDNLLNRVQKLSRVIN 381
>POMBASE|SPBC582.07c [details] [associations]
symbol:rpn7 "19S proteasome regulatory subunit Rpn7"
species:4896 "Schizosaccharomyces pombe" [GO:0000070 "mitotic
sister chromatid segregation" evidence=IMP] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0007346 "regulation of mitotic cell
cycle" evidence=IMP] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=ISO] [GO:0031144 "proteasome
localization" evidence=IGI] [GO:0031595 "nuclear proteasome
complex" evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0043248 "proteasome
assembly" evidence=IGI] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 PomBase:SPBC582.07c GO:GO:0005829 GO:GO:0007346
GO:GO:0043161 EMBL:CU329671 Gene3D:1.10.10.10 InterPro:IPR011991
GenomeReviews:CU329671_GR GO:GO:0000070 GO:GO:0043248
eggNOG:COG5187 InterPro:IPR019585 Pfam:PF10602 GO:GO:0031144
GO:GO:0008540 GO:GO:0031595 HOGENOM:HOG000214998 KO:K03037
OMA:YTVYVCM EMBL:D89258 PIR:T37976 PIR:T43183 RefSeq:NP_595175.1
ProteinModelPortal:Q10335 STRING:Q10335 EnsemblFungi:SPBC582.07c.1
GeneID:2540794 KEGG:spo:SPBC582.07c OrthoDB:EOG40S3QF
NextBio:20801912 Uniprot:Q10335
Length = 409
Score = 393 (143.4 bits), Expect = 1.7e-36, P = 1.7e-36
Identities = 92/231 (39%), Positives = 137/231 (59%)
Query: 5 GGDWSARNKLKAYEGVYCLAIRQYCRAAELFVDVVPTFESYELAEFGTIIRYTVLACMIA 64
GGDW +N+LKAY+G+Y ++IR + AA+L +D + TF S EL + ++RY V++ I+
Sbjct: 182 GGDWERKNRLKAYQGIYLMSIRNFSGAADLLLDCMSTFSSTELLPYYDVVRYAVISGAIS 241
Query: 65 LPRYNLRKKLMHHGVMAQAL--HSQYRDLREYFVSLYDGHYFEFLKCLAAVEQD-MKRDP 121
L R +++ K++ + L + L SLY Y F + LA VE + +K D
Sbjct: 242 LDRVDVKTKIVDSPEVLAVLPQNESMSSLEACINSLYLCDYSGFFRTLADVEVNHLKCDQ 301
Query: 122 LLNPHYRHYVQEMRLRAYKQILQAYRSLSLKYMAQCFGVSVEFIEKEVARFAAAGRLQCK 181
L HYR+YV+EMR RAY Q+L++YR+LS+ MA FGVSV++I++++A F +L C
Sbjct: 302 FLVAHYRYYVREMRRRAYAQLLESYRALSIDSMAASFGVSVDYIDRDLASFIPDNKLNCV 361
Query: 182 IDSVAGNVVTTSHISEKGDCRSEAPEASLDRGILYQTTVKRGDIFLNRLKK 232
ID V G VV T+ EK R YQ VK+GD+ LN+L+K
Sbjct: 362 IDRVNG-VVFTNRPDEKN--RQ------------YQEVVKQGDVLLNKLQK 397
>ASPGD|ASPL0000043868 [details] [associations]
symbol:AN1922 species:162425 "Emericella nidulans"
[GO:0008541 "proteasome regulatory particle, lid subcomplex"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0031595
"nuclear proteasome complex" evidence=IEA] [GO:0005198 "structural
molecule activity" evidence=IEA] [GO:0000070 "mitotic sister
chromatid segregation" evidence=IEA] [GO:0043248 "proteasome
assembly" evidence=IEA] [GO:0007346 "regulation of mitotic cell
cycle" evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0031144 "proteasome
localization" evidence=IEA] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 EMBL:BN001307 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0000502 EMBL:AACD01000029 eggNOG:COG5187 InterPro:IPR019585
Pfam:PF10602 HOGENOM:HOG000214998 KO:K03037 OrthoDB:EOG40S3QF
RefSeq:XP_659526.1 ProteinModelPortal:Q5BC08 STRING:Q5BC08
EnsemblFungi:CADANIAT00008582 GeneID:2874584 KEGG:ani:AN1922.2
OMA:FTSYELC Uniprot:Q5BC08
Length = 484
Score = 230 (86.0 bits), Expect = 9.0e-35, Sum P(2) = 9.0e-35
Identities = 57/162 (35%), Positives = 91/162 (56%)
Query: 78 GVMAQALHS-QYRDLREYFVSLYDGHYFEFLKCLAAVEQD-MKRDPLLNPHYRHYVQEMR 135
G+ A+A + + L SLY+G+Y F LAAVE + +D L H +V+EMR
Sbjct: 330 GIQAEAENPIDFTPLSNLVSSLYNGNYRTFFLALAAVEDHFLTQDRYLYEHRAWFVREMR 389
Query: 136 LRAYKQILQAYRSLSLKYMAQCFGVSVEFIEKEVARFAAAGRLQCKIDSVAGNVVTTSHI 195
LRAY+Q+LQ+YR + L MA FGV+V+++++++ARF + R+ C ID V G ++ T+
Sbjct: 390 LRAYQQLLQSYRVVGLNSMANDFGVTVDYLDRDLARFISNNRIACTIDRVNG-IIETNR- 447
Query: 196 SEKGDCRSEAPEASLDRGILYQTTVKRGDIFLNRLKKLARVI 237
P+ D+ Y VK GD + +L+K + +
Sbjct: 448 ----------PD---DKNKQYADVVKHGDALITKLQKYGQAV 476
Score = 176 (67.0 bits), Expect = 9.0e-35, Sum P(2) = 9.0e-35
Identities = 32/72 (44%), Positives = 48/72 (66%)
Query: 4 SGGDWSARNKLKAYEGVYCLAIRQYCRAAELFVDVVPTFESYELAEFGTIIRYTVLACMI 63
SGGDW RN+LKAY+G++ L +R Y AA L +D + TF SYEL + ++ Y VLA +
Sbjct: 203 SGGDWDRRNRLKAYKGLHLLTVRSYSAAAPLLLDSLSTFTSYELCSYSALVIYAVLAGSL 262
Query: 64 ALPRYNLRKKLM 75
+L R + + K++
Sbjct: 263 SLKRVDFKAKVV 274
>CGD|CAL0003998 [details] [associations]
symbol:RPN7 species:5476 "Candida albicans" [GO:0008541
"proteasome regulatory particle, lid subcomplex" evidence=IEA]
[GO:0031595 "nuclear proteasome complex" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IEA] [GO:0043248 "proteasome assembly"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IEA] [GO:0031144 "proteasome localization"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR000717 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF01399 PROSITE:PS50005
PROSITE:PS50293 SMART:SM00088 CGD:CAL0003998 Gene3D:1.10.10.10
InterPro:IPR011991 Gene3D:1.25.40.10 EMBL:AACQ01000069
eggNOG:COG5187 InterPro:IPR019585 Pfam:PF10602 HOGENOM:HOG000214998
KO:K03037 RefSeq:XP_716421.1 ProteinModelPortal:Q5A421
STRING:Q5A421 GeneID:3641909 KEGG:cal:CaO19.7286 Uniprot:Q5A421
Length = 400
Score = 309 (113.8 bits), Expect = 1.3e-27, P = 1.3e-27
Identities = 77/242 (31%), Positives = 129/242 (53%)
Query: 1 MSISGGDWSARNKLKAYEGVYCLAIRQYCRAAELFVDVVPTFESYELAEFGTIIRYTVLA 60
+S GGDW RN+ KAY G+Y LA R + AA+L +D + TF S EL + I ++A
Sbjct: 167 LSEKGGDWERRNRFKAYNGIYMLATRNFAEAAKLLIDSLATFTSTELCSYEAIAHCAIVA 226
Query: 61 CMIALPRYNLRKKLMHHG-VMAQALHS-QYRDLREYFVSLYDGHY---FEFLKCLAAVEQ 115
+++L R +L+ K++ +++ A + L SLY Y F++L L + E+
Sbjct: 227 GVLSLERVDLKNKIIDSPEILSIASTTPNLEPLLNLTNSLYTCEYNCFFQYL--LESYEK 284
Query: 116 DMKRDPLLNPHYRHYVQEMRLRAYKQILQAYRSLSLKYMAQCFGVSVEFIEKEVARFAAA 175
+ + L H +++EMR +AY Q+L++Y+SLSLK MA F +S EF+++++ +F
Sbjct: 285 LLLPNKYLYKHANFFLREMRCKAYNQLLESYKSLSLKSMATNFNISEEFLDQDLCKFIPN 344
Query: 176 GRLQCKIDSVAGNVVTTSHISEKGDCRSEAPEASLDRGILYQTTVKRGDIFLNRLKKLAR 235
+L C ID V G ++ T+ K + Y +K+GD L +L+K
Sbjct: 345 KKLNCTIDKVNG-IIETNRPDNKNN--------------QYHALIKQGDNLLTKLQKYGA 389
Query: 236 VI 237
+
Sbjct: 390 AV 391
>SGD|S000006312 [details] [associations]
symbol:RPN7 "non-ATPase regulatory subunit of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0005198
"structural molecule activity" evidence=IMP] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0000502 "proteasome complex" evidence=IEA] [GO:0008541
"proteasome regulatory particle, lid subcomplex" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR000717
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF01399 PROSITE:PS50005 PROSITE:PS50293 SMART:SM00088
SGD:S000006312 GO:GO:0005634 GO:GO:0005198 Gene3D:1.10.10.10
InterPro:IPR011991 EMBL:BK006949 Gene3D:1.25.40.10 GO:GO:0008541
GO:GO:0006511 EMBL:U32445 eggNOG:COG5187 InterPro:IPR019585
Pfam:PF10602 GeneTree:ENSGT00510000046608 PDB:4B4T PDBsum:4B4T
HOGENOM:HOG000214998 KO:K03037 OMA:YTVYVCM OrthoDB:EOG40S3QF
EMBL:AY692769 PIR:S59773 RefSeq:NP_015433.1
ProteinModelPortal:Q06103 DIP:DIP-2880N IntAct:Q06103
MINT:MINT-531082 STRING:Q06103 PaxDb:Q06103 PeptideAtlas:Q06103
EnsemblFungi:YPR108W GeneID:856223 KEGG:sce:YPR108W NextBio:981456
Genevestigator:Q06103 GermOnline:YPR108W Uniprot:Q06103
Length = 429
Score = 309 (113.8 bits), Expect = 1.3e-27, P = 1.3e-27
Identities = 75/236 (31%), Positives = 122/236 (51%)
Query: 5 GGDWSARNKLKAYEGVYCLAIRQYCRAAELFVDVVPTFESYELAEFGTIIRYTVLACMIA 64
GGDW RN+ K Y G++CLA+R + AA+L VD + TF S EL + +I Y + +
Sbjct: 201 GGDWERRNRYKTYYGIHCLAVRNFKEAAKLLVDSLATFTSIELTSYESIATYASVTGLFT 260
Query: 65 LPRYNLRKKLMHHGVMAQALHSQ--YRDLREYFVSLYDGHYFEFLKCLAAVEQDMKRD-P 121
L R +L+ K++ + + + + + +SLY Y + L ++
Sbjct: 261 LERTDLKSKVIDSPELLSLISTTAALQSISSLTISLYASDYASYFPYLLETYANVLIPCK 320
Query: 122 LLNPHYRHYVQEMRLRAYKQILQAYRSLSLKYMAQCFGVSVEFIEKEVARFAAAGRLQCK 181
LN H +V+EMR + Y Q+L++Y++LSLK MA FGVSV F++ ++ +F +L C
Sbjct: 321 YLNRHADFFVREMRRKVYAQLLESYKTLSLKSMASAFGVSVAFLDNDLGKFIPNKQLNCV 380
Query: 182 IDSVAGNVVTTSHISEKGDCRSEAPEASLDRGILYQTTVKRGDIFLNRLKKLARVI 237
ID V G +V T+ P+ ++ Y VK+GD L +L+K +
Sbjct: 381 IDRVNG-IVETNR-----------PD---NKNAQYHLLVKQGDGLLTKLQKYGAAV 421
>TAIR|locus:2098851 [details] [associations]
symbol:FUS6 "FUSCA 6" species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM;ISS;IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0008180 "signalosome" evidence=TAS;IPI]
[GO:0009640 "photomorphogenesis" evidence=RCA;TAS] [GO:0000338
"protein deneddylation" evidence=TAS] [GO:0006461 "protein complex
assembly" evidence=IDA] [GO:0006972 "hyperosmotic response"
evidence=IEP] [GO:0009646 "response to absence of light"
evidence=IEP] [GO:0009651 "response to salt stress" evidence=IEP]
[GO:0010388 "cullin deneddylation" evidence=RCA;IMP] [GO:0005829
"cytosol" evidence=IDA] [GO:0000003 "reproduction" evidence=RCA]
[GO:0006325 "chromatin organization" evidence=RCA] [GO:0007062
"sister chromatid cohesion" evidence=RCA] [GO:0007131 "reciprocal
meiotic recombination" evidence=RCA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=IMP;RCA] [GO:0009845
"seed germination" evidence=RCA] [GO:0009880 "embryonic pattern
specification" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010090 "trichome
morphogenesis" evidence=RCA] [GO:0010162 "seed dormancy process"
evidence=RCA] [GO:0010182 "sugar mediated signaling pathway"
evidence=RCA] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=RCA] [GO:0010431 "seed maturation"
evidence=RCA] [GO:0010564 "regulation of cell cycle process"
evidence=RCA] [GO:0010638 "positive regulation of organelle
organization" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0016571 "histone methylation" evidence=RCA]
[GO:0016579 "protein deubiquitination" evidence=RCA] [GO:0019915
"lipid storage" evidence=RCA] [GO:0033044 "regulation of chromosome
organization" evidence=RCA] [GO:0045595 "regulation of cell
differentiation" evidence=RCA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA] [GO:0048366 "leaf
development" evidence=RCA] [GO:0048825 "cotyledon development"
evidence=RCA] [GO:0050826 "response to freezing" evidence=RCA]
[GO:0051301 "cell division" evidence=RCA] InterPro:IPR000717
Pfam:PF01399 SMART:SM00088 GO:GO:0005829 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0006461 GO:GO:0009651
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0009793 GO:GO:0006972
GO:GO:0009646 EMBL:AL137898 GO:GO:0009585 GO:GO:0008180
GO:GO:0010388 EMBL:L26498 EMBL:AF395057 EMBL:AF360295 EMBL:AK117532
EMBL:AY051056 EMBL:AJ243015 IPI:IPI00545799 PIR:T47906
RefSeq:NP_567109.1 UniGene:At.303 ProteinModelPortal:P45432
IntAct:P45432 STRING:P45432 PaxDb:P45432 PRIDE:P45432
EnsemblPlants:AT3G61140.1 GeneID:825286 KEGG:ath:AT3G61140
TAIR:At3g61140 eggNOG:COG5187 HOGENOM:HOG000091977
InParanoid:P45432 KO:K12175 OMA:CPPLRVE PhylomeDB:P45432
ProtClustDB:CLSN2689283 Genevestigator:P45432 GermOnline:AT3G61140
InterPro:IPR019585 Pfam:PF10602 Uniprot:P45432
Length = 441
Score = 156 (60.0 bits), Expect = 4.0e-09, P = 4.0e-09
Identities = 49/188 (26%), Positives = 87/188 (46%)
Query: 13 KLKAYEGVYCLAIRQYCRAAELFVDVVPTF-ESY-ELAEFGTIIRYTVLACMIALPRYNL 70
KL+ G+ L +++Y AA F+DV P SY E+ I Y L + + R L
Sbjct: 216 KLRCASGLAHLELKKYKLAARKFLDVNPELGNSYNEVIAPQDIATYGGLCALASFDRSEL 275
Query: 71 RKKLMHHGVMAQALHSQYRDLREYFVSLYDGHYFEFLKCLAAVEQDMKRDPLLNPHYRHY 130
++K++ + + + D+RE Y Y L+ LA+++ ++ D L+ H
Sbjct: 276 KQKVIDN-INFRNFLELVPDVRELINDFYSSRYASCLEYLASLKSNLLLDIHLHDHVDTL 334
Query: 131 VQEMRLRAYKQILQAYRSLSLKYMAQCFGVSVEFIEKEVARFAAAGRLQCKIDSVAGNVV 190
++R +A Q + S+ L MA F SV +EKE+ ++Q +IDS ++
Sbjct: 335 YDQIRKKALIQYTLPFVSVDLSRMADAFKTSVSGLEKELEALITDNQIQARIDS-HNKIL 393
Query: 191 TTSHISEK 198
H ++
Sbjct: 394 YARHADQR 401
>UNIPROTKB|F1MP10 [details] [associations]
symbol:GPS1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0010388 "cullin deneddylation" evidence=IEA]
[GO:0008180 "signalosome" evidence=IEA] InterPro:IPR000717
Pfam:PF01399 SMART:SM00088 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0008180 GO:GO:0010388 OMA:CPPLRVE InterPro:IPR019585
Pfam:PF10602 GeneTree:ENSGT00510000046608 EMBL:DAAA02049401
IPI:IPI00867147 Ensembl:ENSBTAT00000025728 ArrayExpress:F1MP10
Uniprot:F1MP10
Length = 478
Score = 153 (58.9 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 56/213 (26%), Positives = 98/213 (46%)
Query: 13 KLKAYEGVYCLAIRQYCRAAELFVDVVPTFESYELAEFGTIIRYTVLACMIALPRYNLRK 72
KLK G+ LA R+Y +AA+ F+ + +F+ + E + V + AL ++ R+
Sbjct: 235 KLKCAAGLAELAARKYKQAAKCFL--LASFDHCDFPELLSPSNVAVYGGLCALATFD-RQ 291
Query: 73 KLMHHGVMAQALHSQYRDL----REYFVSLYDGHYFEFLKCLAAVEQDMKRDPLLNPHYR 128
+L + V++ + + +L R+ Y+ Y LK L ++ ++ D L PH R
Sbjct: 292 ELQRN-VISSSSFKLFLELEPQVRDIIFKFYESKYASCLKMLDEMKDNLLLDMYLAPHVR 350
Query: 129 HYVQEMRLRAYKQILQAYRSLSLKYMAQCFGVSVEFIEKEVARFAAAGRLQCKIDSVAGN 188
++R RA Q Y S ++ MA F +V +E E+ + G + +IDS +
Sbjct: 351 TLYTQIRNRALIQYFSPYVSADMRKMATAFNTTVAALEDELTQLILEGLINARIDSHS-K 409
Query: 189 VVTTSHISEKGDCRSEAPEASLDRGILYQTTVK 221
++ + D RS E SL G +Q K
Sbjct: 410 ILYARDV----DQRSTTFEKSLLMGKEFQRRAK 438
>UNIPROTKB|F1P996 [details] [associations]
symbol:GPS1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0010388 "cullin deneddylation" evidence=IEA]
[GO:0008180 "signalosome" evidence=IEA] InterPro:IPR000717
InterPro:IPR011990 Pfam:PF01399 SMART:SM00088 Gene3D:1.10.10.10
InterPro:IPR011991 Gene3D:1.25.40.10 GO:GO:0008180 GO:GO:0010388
OMA:CPPLRVE InterPro:IPR019585 Pfam:PF10602
GeneTree:ENSGT00510000046608 EMBL:AAEX03006161
Ensembl:ENSCAFT00000009593 Uniprot:F1P996
Length = 433
Score = 150 (57.9 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 56/213 (26%), Positives = 97/213 (45%)
Query: 13 KLKAYEGVYCLAIRQYCRAAELFVDVVPTFESYELAEFGTIIRYTVLACMIALPRYNLRK 72
KLK G+ LA R+Y +AA+ F+ + +F+ + E + V + AL ++ R+
Sbjct: 190 KLKCAAGLAELAARKYKQAAKCFL--LASFDHCDFPELLSPSNVAVYGGLCALATFD-RQ 246
Query: 73 KLMHHGVMAQALHSQYRDL----REYFVSLYDGHYFEFLKCLAAVEQDMKRDPLLNPHYR 128
+L + V++ + + +L R+ Y+ Y LK L ++ ++ D L PH R
Sbjct: 247 ELQRN-VISSSSFKLFLELEPQVRDIIFKFYESKYASCLKMLDEMKDNLLLDMYLAPHVR 305
Query: 129 HYVQEMRLRAYKQILQAYRSLSLKYMAQCFGVSVEFIEKEVARFAAAGRLQCKIDSVAGN 188
++R RA Q Y S + MA F +V +E E+ + G + +IDS +
Sbjct: 306 TLYTQIRNRALIQYFSPYVSADMHKMAAAFNTTVAALEDELTQLILEGLINARIDSHS-K 364
Query: 189 VVTTSHISEKGDCRSEAPEASLDRGILYQTTVK 221
++ + D RS E SL G +Q K
Sbjct: 365 ILYARDV----DQRSTTFEKSLLMGKEFQRRAK 393
>DICTYBASE|DDB_G0283587 [details] [associations]
symbol:csn1 "COP9 signalosome complex subunit 1"
species:44689 "Dictyostelium discoideum" [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0008180 "signalosome" evidence=IEA;ISS;IPI] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 dictyBase:DDB_G0283587 GO:GO:0005737 GO:GO:0043161
GenomeReviews:CM000153_GR Gene3D:1.10.10.10 InterPro:IPR011991
EMBL:AAFI02000055 GO:GO:0008180 eggNOG:COG5187 KO:K12175
OMA:CPPLRVE InterPro:IPR019585 Pfam:PF10602 EMBL:DQ309429
RefSeq:XP_639011.1 ProteinModelPortal:Q54QX3 STRING:Q54QX3
PRIDE:Q54QX3 EnsemblProtists:DDB0233099 GeneID:8624141
KEGG:ddi:DDB_G0283587 ProtClustDB:CLSZ2728967 Uniprot:Q54QX3
Length = 458
Score = 150 (57.9 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 47/175 (26%), Positives = 79/175 (45%)
Query: 13 KLKAYEGVYCLAIRQYCRAAELFVDVVPTFESYELAEFGT---IIRYTVLACMIALPRYN 69
KL++ G+Y L +Y AA F++ P +S ++ + I Y L + R
Sbjct: 204 KLRSVNGLYNLDGSRYKLAARKFIET-PFEQSNVFSDIISPQDIAYYGGLCALATFDRNE 262
Query: 70 LRKKLMHHGVMAQALHSQYRDLREYFVSLYDGHYFEFLKCLAAVEQDMKRDPLLNPHYRH 129
L+KK++ + L +LRE Y+ Y LK L ++ + D L H
Sbjct: 263 LKKKVIDDPMFKNYLEL-VPELRELINDFYNTKYGSCLKYLDKMKPILLLDIHLYKHVEI 321
Query: 130 YVQEMRLRAYKQILQAYRSLSLKYMAQCFGVSVEFIEKEVARFAAAGRLQCKIDS 184
Q +R +A Q Y+S+ + MA F +V +EKE+++ +Q +IDS
Sbjct: 322 LYQRIRSKALVQYFSPYQSVDMNIMASAFNTTVTLLEKEISKLIMENEIQARIDS 376
>MGI|MGI:2384801 [details] [associations]
symbol:Gps1 "G protein pathway suppressor 1" species:10090
"Mus musculus" [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0008180 "signalosome" evidence=ISO;IDA]
[GO:0010388 "cullin deneddylation" evidence=ISO] InterPro:IPR000717
InterPro:IPR011990 Pfam:PF01399 SMART:SM00088 MGI:MGI:2384801
GO:GO:0005737 Gene3D:1.10.10.10 InterPro:IPR011991
Gene3D:1.25.40.10 GO:GO:0008180 EMBL:AL663090 GO:GO:0010388
eggNOG:COG5187 InterPro:IPR019585 Pfam:PF10602 HOVERGEN:HBG030722
EMBL:AK088490 EMBL:BC003350 IPI:IPI00116793 IPI:IPI00480341
UniGene:Mm.30195 ProteinModelPortal:Q99LD4 STRING:Q99LD4
PhosphoSite:Q99LD4 PaxDb:Q99LD4 PRIDE:Q99LD4 NextBio:372621
Bgee:Q99LD4 CleanEx:MM_GPS1 Genevestigator:Q99LD4
GermOnline:ENSMUSG00000025156 Uniprot:Q99LD4
Length = 471
Score = 150 (57.9 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 56/213 (26%), Positives = 97/213 (45%)
Query: 13 KLKAYEGVYCLAIRQYCRAAELFVDVVPTFESYELAEFGTIIRYTVLACMIALPRYNLRK 72
KLK G+ LA R+Y +AA+ F+ + +F+ + E + V + AL ++ R+
Sbjct: 228 KLKCAAGLAELAARKYKQAAKCFL--LASFDHCDFPELLSPSNVAVYGGLCALATFD-RQ 284
Query: 73 KLMHHGVMAQALHSQYRDL----REYFVSLYDGHYFEFLKCLAAVEQDMKRDPLLNPHYR 128
+L + V++ + + +L R+ Y+ Y LK L ++ ++ D L PH R
Sbjct: 285 ELQRN-VISSSSFKLFLELEPQVRDIIFKFYESKYASCLKMLDEMKDNLLLDMYLAPHVR 343
Query: 129 HYVQEMRLRAYKQILQAYRSLSLKYMAQCFGVSVEFIEKEVARFAAAGRLQCKIDSVAGN 188
++R RA Q Y S + MA F +V +E E+ + G + +IDS +
Sbjct: 344 TLYTQIRNRALIQYFSPYVSADMHKMAAAFNTTVAALEDELTQLILEGLINARIDSHS-K 402
Query: 189 VVTTSHISEKGDCRSEAPEASLDRGILYQTTVK 221
++ + D RS E SL G +Q K
Sbjct: 403 ILYARDV----DQRSTTFEKSLLMGKEFQRRAK 431
>UNIPROTKB|F1NB10 [details] [associations]
symbol:GPS1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008180 "signalosome" evidence=IEA] [GO:0010388 "cullin
deneddylation" evidence=IEA] InterPro:IPR000717 InterPro:IPR011990
Pfam:PF01399 SMART:SM00088 Gene3D:1.10.10.10 InterPro:IPR011991
Gene3D:1.25.40.10 GO:GO:0008180 GO:GO:0010388 InterPro:IPR019585
Pfam:PF10602 GeneTree:ENSGT00510000046608 EMBL:AADN02029975
IPI:IPI00580463 PRIDE:F1NB10 Ensembl:ENSGALT00000004462
ArrayExpress:F1NB10 Uniprot:F1NB10
Length = 487
Score = 150 (57.9 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 56/213 (26%), Positives = 97/213 (45%)
Query: 13 KLKAYEGVYCLAIRQYCRAAELFVDVVPTFESYELAEFGTIIRYTVLACMIALPRYNLRK 72
KLK G+ LA R+Y +AA+ F+ + +F+ + E + V + AL ++ R+
Sbjct: 244 KLKCAAGLAELAARKYKQAAKCFL--LASFDHCDFPELLSPSNVAVYGGLCALATFD-RQ 300
Query: 73 KLMHHGVMAQALHSQYRDL----REYFVSLYDGHYFEFLKCLAAVEQDMKRDPLLNPHYR 128
+L + V++ + + +L R+ Y+ Y LK L ++ ++ D L PH R
Sbjct: 301 ELQRN-VISSSSFKLFLELEPQVRDIIFKFYESKYASCLKMLDEMKDNLLLDMYLAPHVR 359
Query: 129 HYVQEMRLRAYKQILQAYRSLSLKYMAQCFGVSVEFIEKEVARFAAAGRLQCKIDSVAGN 188
++R RA Q Y S + MA F +V +E E+ + G + +IDS +
Sbjct: 360 TLYTQIRNRALIQYFSPYVSADMHKMATAFNTTVAALEDELTQLILEGLINARIDSHS-K 418
Query: 189 VVTTSHISEKGDCRSEAPEASLDRGILYQTTVK 221
++ + D RS E SL G +Q K
Sbjct: 419 ILYARDV----DQRSTTFEKSLLMGKEFQRRAK 447
>UNIPROTKB|F1NJQ7 [details] [associations]
symbol:GPS1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008180 "signalosome" evidence=IEA] [GO:0010388 "cullin
deneddylation" evidence=IEA] InterPro:IPR000717 InterPro:IPR011990
Pfam:PF01399 SMART:SM00088 Gene3D:1.10.10.10 InterPro:IPR011991
Gene3D:1.25.40.10 GO:GO:0008180 GO:GO:0010388 InterPro:IPR019585
Pfam:PF10602 GeneTree:ENSGT00510000046608 EMBL:AADN02029975
IPI:IPI00818730 Ensembl:ENSGALT00000038889 OMA:SHERARS
ArrayExpress:F1NJQ7 Uniprot:F1NJQ7
Length = 491
Score = 150 (57.9 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 56/213 (26%), Positives = 97/213 (45%)
Query: 13 KLKAYEGVYCLAIRQYCRAAELFVDVVPTFESYELAEFGTIIRYTVLACMIALPRYNLRK 72
KLK G+ LA R+Y +AA+ F+ + +F+ + E + V + AL ++ R+
Sbjct: 248 KLKCAAGLAELAARKYKQAAKCFL--LASFDHCDFPELLSPSNVAVYGGLCALATFD-RQ 304
Query: 73 KLMHHGVMAQALHSQYRDL----REYFVSLYDGHYFEFLKCLAAVEQDMKRDPLLNPHYR 128
+L + V++ + + +L R+ Y+ Y LK L ++ ++ D L PH R
Sbjct: 305 ELQRN-VISSSSFKLFLELEPQVRDIIFKFYESKYASCLKMLDEMKDNLLLDMYLAPHVR 363
Query: 129 HYVQEMRLRAYKQILQAYRSLSLKYMAQCFGVSVEFIEKEVARFAAAGRLQCKIDSVAGN 188
++R RA Q Y S + MA F +V +E E+ + G + +IDS +
Sbjct: 364 TLYTQIRNRALIQYFSPYVSADMHKMATAFNTTVAALEDELTQLILEGLINARIDSHS-K 422
Query: 189 VVTTSHISEKGDCRSEAPEASLDRGILYQTTVK 221
++ + D RS E SL G +Q K
Sbjct: 423 ILYARDV----DQRSTTFEKSLLMGKEFQRRAK 451
>RGD|621532 [details] [associations]
symbol:Gps1 "G protein pathway suppressor 1" species:10116
"Rattus norvegicus" [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0008180 "signalosome"
evidence=IEA;ISO] [GO:0010388 "cullin deneddylation" evidence=ISO]
InterPro:IPR000717 InterPro:IPR011990 Pfam:PF01399 SMART:SM00088
RGD:621532 GO:GO:0005737 Gene3D:1.10.10.10 InterPro:IPR011991
Gene3D:1.25.40.10 GO:GO:0008180 KO:K12175 InterPro:IPR019585
Pfam:PF10602 CTD:2873 HOVERGEN:HBG030722 EMBL:X87885 EMBL:BC061746
IPI:IPI00208644 PIR:S57449 RefSeq:NP_001257868.1 RefSeq:NP_446421.3
UniGene:Rn.16873 PhosphoSite:P97834 PRIDE:P97834 GeneID:117039
KEGG:rno:117039 NextBio:619843 Genevestigator:P97834 Uniprot:P97834
Length = 471
Score = 149 (57.5 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 56/213 (26%), Positives = 97/213 (45%)
Query: 13 KLKAYEGVYCLAIRQYCRAAELFVDVVPTFESYELAEFGTIIRYTVLACMIALPRYNLRK 72
KLK G+ LA R+Y +AA+ F+ + +F+ + E + V + AL ++ R+
Sbjct: 228 KLKCAAGLAELAARKYKQAAKCFL--LASFDHCDFPELLSPSNVAVYGGLCALATFD-RQ 284
Query: 73 KLMHHGVMAQALHSQYRDL----REYFVSLYDGHYFEFLKCLAAVEQDMKRDPLLNPHYR 128
+L + V++ + + +L R+ Y+ Y LK L ++ ++ D L PH R
Sbjct: 285 ELQRN-VISSSSFKLFLELEPQVRDIIFKFYESKYASCLKMLDEMKDNLLLDMYLAPHVR 343
Query: 129 HYVQEMRLRAYKQILQAYRSLSLKYMAQCFGVSVEFIEKEVARFAAAGRLQCKIDSVAGN 188
++R RA Q Y S + MA F +V +E E+ + G + +IDS +
Sbjct: 344 TLYTQIRNRALIQYFSPYVSADMHKMAAAFNTTVAALEDELTQVILEGLINARIDSHS-K 402
Query: 189 VVTTSHISEKGDCRSEAPEASLDRGILYQTTVK 221
++ + D RS E SL G +Q K
Sbjct: 403 ILYARDV----DQRSTTFEKSLLMGKEFQRRAK 431
>ZFIN|ZDB-GENE-041111-240 [details] [associations]
symbol:gps1 "G protein pathway suppressor 1"
species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR000717 InterPro:IPR011990 Pfam:PF01399 SMART:SM00088
ZFIN:ZDB-GENE-041111-240 Gene3D:1.10.10.10 InterPro:IPR011991
Gene3D:1.25.40.10 HOGENOM:HOG000091977 InterPro:IPR019585
Pfam:PF10602 GeneTree:ENSGT00510000046608 HOVERGEN:HBG030722
EMBL:BX897685 IPI:IPI00774251 UniGene:Dr.52385
Ensembl:ENSDART00000141106 Uniprot:B0S7K9
Length = 490
Score = 147 (56.8 bits), Expect = 6.6e-08, P = 6.6e-08
Identities = 56/213 (26%), Positives = 94/213 (44%)
Query: 13 KLKAYEGVYCLAIRQYCRAAELFVDVVPTFESYELAEFGTIIRYTVLACMIALPRYNLRK 72
KLK G LA R+Y AA+ F+ +F+ + E + V + AL ++ R+
Sbjct: 247 KLKCAAGKAELASRKYKPAAKCFLQA--SFDHCDFPELLSPSNVAVYGGLCALATFD-RQ 303
Query: 73 KLMHHGVMAQALHSQYRDL----REYFVSLYDGHYFEFLKCLAAVEQDMKRDPLLNPHYR 128
+L + V++ + + +L R+ Y+ Y LK L ++ ++ D L PH R
Sbjct: 304 ELQRN-VISSSSFKLFLELEPQVRDIIFKFYESKYASCLKMLDEMKDNLLLDMYLAPHVR 362
Query: 129 HYVQEMRLRAYKQILQAYRSLSLKYMAQCFGVSVEFIEKEVARFAAAGRLQCKIDSVAGN 188
++R RA Q Y S + MA F +V +E E+ + G + +IDS +
Sbjct: 363 TLYTQIRNRALIQYFSPYVSADMNKMAVAFNTTVAALEDELTQLILEGLINARIDSHS-K 421
Query: 189 VVTTSHISEKGDCRSEAPEASLDRGILYQTTVK 221
++ + D RS E SL G +Q K
Sbjct: 422 ILYARDV----DQRSTTFEKSLQMGKEFQRRAK 450
>UNIPROTKB|C9JFE4 [details] [associations]
symbol:GPS1 "G protein pathway suppressor 1, isoform CRA_b"
species:9606 "Homo sapiens" [GO:0008180 "signalosome" evidence=IEA]
InterPro:IPR000717 Pfam:PF01399 SMART:SM00088 Gene3D:1.10.10.10
InterPro:IPR011991 EMBL:CH471099 HOGENOM:HOG000091977
InterPro:IPR019585 Pfam:PF10602 EMBL:AC135056 IPI:IPI00300386
UniGene:Hs.268530 HGNC:HGNC:4549 ChiTaRS:GPS1 STRING:C9JFE4
Ensembl:ENST00000320548 OrthoDB:EOG469QTM Uniprot:C9JFE4
Length = 471
Score = 143 (55.4 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 52/212 (24%), Positives = 91/212 (42%)
Query: 13 KLKAYEGVYCLAIRQYCRAAELFVDVVPTFESYELAEF---GTIIRYTVLACMIALPRYN 69
KLK G+ LA R+Y +AA+ + + +F+ + E + Y L + R
Sbjct: 228 KLKCAAGLAELAARKYKQAAKCLL--LASFDHCDFPELLSPSNVAIYGGLCALATFDRQE 285
Query: 70 LRKKLMHHGVMAQALHSQYRDLREYFVSLYDGHYFEFLKCLAAVEQDMKRDPLLNPHYRH 129
L++ ++ L + + +R+ Y+ Y LK L ++ ++ D L PH R
Sbjct: 286 LQRNVISSSSFKLFLELEPQ-VRDIIFKFYESKYASCLKMLDEMKDNLLLDMYLAPHVRT 344
Query: 130 YVQEMRLRAYKQILQAYRSLSLKYMAQCFGVSVEFIEKEVARFAAAGRLQCKIDSVAGNV 189
++R RA Q Y S + MA F +V +E E+ + G + ++DS + +
Sbjct: 345 LYTQIRNRALIQYFSPYVSADMHRMAAAFNTTVAALEDELTQLILEGLISARVDSHS-KI 403
Query: 190 VTTSHISEKGDCRSEAPEASLDRGILYQTTVK 221
+ + D RS E SL G +Q K
Sbjct: 404 LYARDV----DQRSTTFEKSLLMGKEFQRRAK 431
>UNIPROTKB|Q13098 [details] [associations]
symbol:GPS1 "COP9 signalosome complex subunit 1"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008180 "signalosome" evidence=IDA] [GO:0010388 "cullin
deneddylation" evidence=IDA] [GO:0000188 "inactivation of MAPK
activity" evidence=TAS] [GO:0005095 "GTPase inhibitor activity"
evidence=TAS] [GO:0007049 "cell cycle" evidence=TAS] [GO:0007254
"JNK cascade" evidence=TAS] InterPro:IPR000717 InterPro:IPR011990
Pfam:PF01399 SMART:SM00088 GO:GO:0005737 GO:GO:0000188
GO:GO:0007254 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0007049
GO:GO:0005095 Gene3D:1.25.40.10 GO:GO:0008180 GO:GO:0010388
eggNOG:COG5187 HOGENOM:HOG000091977 KO:K12175 OMA:CPPLRVE
InterPro:IPR019585 Pfam:PF10602 EMBL:U20285 EMBL:AK093283
EMBL:AC135056 EMBL:BC000155 EMBL:BC064503 EMBL:BT009834
IPI:IPI00156282 IPI:IPI00300386 IPI:IPI00414289 IPI:IPI00921488
PIR:G01646 RefSeq:NP_004118.3 RefSeq:NP_997657.1 UniGene:Hs.268530
ProteinModelPortal:Q13098 DIP:DIP-42077N IntAct:Q13098
MINT:MINT-1203964 STRING:Q13098 PhosphoSite:Q13098 DMDM:223590263
PaxDb:Q13098 PRIDE:Q13098 DNASU:2873 Ensembl:ENST00000306823
Ensembl:ENST00000355130 Ensembl:ENST00000392358
Ensembl:ENST00000578552 GeneID:2873 KEGG:hsa:2873 UCSC:uc002kdk.1
UCSC:uc002kdl.1 UCSC:uc002kdm.1 CTD:2873 GeneCards:GC17P080009
HGNC:HGNC:4549 MIM:601934 neXtProt:NX_Q13098 PharmGKB:PA28944
HOVERGEN:HBG030722 ChiTaRS:GPS1 GenomeRNAi:2873 NextBio:11339
ArrayExpress:Q13098 Bgee:Q13098 CleanEx:HS_GPS1
Genevestigator:Q13098 GermOnline:ENSG00000169727 Uniprot:Q13098
Length = 491
Score = 143 (55.4 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 52/212 (24%), Positives = 91/212 (42%)
Query: 13 KLKAYEGVYCLAIRQYCRAAELFVDVVPTFESYELAEF---GTIIRYTVLACMIALPRYN 69
KLK G+ LA R+Y +AA+ + + +F+ + E + Y L + R
Sbjct: 248 KLKCAAGLAELAARKYKQAAKCLL--LASFDHCDFPELLSPSNVAIYGGLCALATFDRQE 305
Query: 70 LRKKLMHHGVMAQALHSQYRDLREYFVSLYDGHYFEFLKCLAAVEQDMKRDPLLNPHYRH 129
L++ ++ L + + +R+ Y+ Y LK L ++ ++ D L PH R
Sbjct: 306 LQRNVISSSSFKLFLELEPQ-VRDIIFKFYESKYASCLKMLDEMKDNLLLDMYLAPHVRT 364
Query: 130 YVQEMRLRAYKQILQAYRSLSLKYMAQCFGVSVEFIEKEVARFAAAGRLQCKIDSVAGNV 189
++R RA Q Y S + MA F +V +E E+ + G + ++DS + +
Sbjct: 365 LYTQIRNRALIQYFSPYVSADMHRMAAAFNTTVAALEDELTQLILEGLISARVDSHS-KI 423
Query: 190 VTTSHISEKGDCRSEAPEASLDRGILYQTTVK 221
+ + D RS E SL G +Q K
Sbjct: 424 LYARDV----DQRSTTFEKSLLMGKEFQRRAK 451
>FB|FBgn0027057 [details] [associations]
symbol:CSN1b "COP9 complex homolog subunit 1 b" species:7227
"Drosophila melanogaster" [GO:0008277 "regulation of G-protein
coupled receptor protein signaling pathway" evidence=ISS]
[GO:0008180 "signalosome" evidence=ISS] [GO:0050821 "protein
stabilization" evidence=IMP] [GO:0007095 "mitotic G2 DNA damage
checkpoint" evidence=IGI] [GO:0022008 "neurogenesis" evidence=IMP]
[GO:0046331 "lateral inhibition" evidence=IMP] InterPro:IPR000717
Pfam:PF01399 SMART:SM00088 GO:GO:0005737 GO:GO:0007095
GO:GO:0050821 EMBL:AE014296 GO:GO:0022008 GO:GO:0048477
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0046331 GO:GO:0008180
GO:GO:0000338 eggNOG:COG5187 KO:K12175 OMA:CPPLRVE
InterPro:IPR019585 Pfam:PF10602 GeneTree:ENSGT00510000046608
EMBL:AF129080 EMBL:AY051972 RefSeq:NP_524152.2 UniGene:Dm.2527
ProteinModelPortal:Q9VVU5 STRING:Q9VVU5 PaxDb:Q9VVU5 PRIDE:Q9VVU5
EnsemblMetazoa:FBtr0075074 GeneID:40063 KEGG:dme:Dmel_CG3889
CTD:40063 FlyBase:FBgn0027057 InParanoid:Q9VVU5 OrthoDB:EOG4PVMDW
PhylomeDB:Q9VVU5 GenomeRNAi:40063 NextBio:816813 Bgee:Q9VVU5
GermOnline:CG3889 GO:GO:0019781 Uniprot:Q9VVU5
Length = 525
Score = 129 (50.5 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 50/207 (24%), Positives = 88/207 (42%)
Query: 13 KLKAYEGVYCLAIRQYCRAAELFVDVVPTFESYELAEFGTIIRYTVLACMIALPRYNLR- 71
+L+ G+ L ++Y AA+ F++ F+ + E + V + AL ++ +
Sbjct: 277 RLECAAGLAELQQKKYKVAAKHFLNA--NFDHCDFPEMISTSNVAVYGGLCALATFDRQE 334
Query: 72 -KKLMHHGVMAQALHSQYRDLREYFVSLYDGHYFEFLKCLAAVEQDMKRDPLLNPHYRHY 130
K+L+ + LR+ Y+ Y L L + ++ D + PH
Sbjct: 335 LKRLVIASTSFKLFLELEPQLRDIIFKFYESKYASCLTLLDEIRDNLLVDMYIAPHVTTL 394
Query: 131 VQEMRLRAYKQILQAYRSLSLKYMAQCFGVSVEFIEKEVARFAAAGRLQCKIDSVAGNVV 190
++R RA Q Y S + MA F SV +E EV + G++Q +IDS N +
Sbjct: 395 YTKIRNRALIQYFSPYMSADMHKMAMAFNSSVGDLENEVMQLILDGQIQARIDS--HNKI 452
Query: 191 TTSHISEKGDCRSEAPEASLDRGILYQ 217
+++ D R+ E +L G YQ
Sbjct: 453 L---FAKEADQRNSTFERALIMGKQYQ 476
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.326 0.138 0.412 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 239 239 0.00092 113 3 11 22 0.48 32
32 0.44 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 31
No. of states in DFA: 599 (64 KB)
Total size of DFA: 184 KB (2105 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 21.45u 0.08s 21.53t Elapsed: 00:00:13
Total cpu time: 21.45u 0.08s 21.53t Elapsed: 00:00:15
Start: Thu Aug 15 12:10:01 2013 End: Thu Aug 15 12:10:16 2013