Query psy3960
Match_columns 351
No_of_seqs 246 out of 1395
Neff 7.2
Searched_HMMs 29240
Date Fri Aug 16 21:45:59 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3960.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/3960hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3qt4_A Cathepsin-L-like midgut 100.0 2E-62 6.8E-67 472.8 22.3 250 96-351 73-329 (329)
2 3kwz_A Cathepsin K; enzyme inh 100.0 2.9E-61 1E-65 439.1 21.8 210 137-351 1-215 (215)
3 8pch_A Cathepsin H; hydrolase, 100.0 2.6E-61 8.8E-66 441.0 21.3 212 137-350 1-217 (220)
4 3qj3_A Cathepsin L-like protei 100.0 2E-61 7E-66 466.5 20.8 250 96-351 68-331 (331)
5 3ovx_A Cathepsin S; hydrolase, 100.0 3.6E-61 1.2E-65 439.4 20.8 211 137-351 2-218 (218)
6 2o6x_A Procathepsin L1, secret 100.0 1.5E-61 5.3E-66 463.7 17.6 247 97-351 51-306 (310)
7 2xu3_A Cathepsin L1; hydrolase 100.0 1E-60 3.5E-65 437.2 22.0 211 137-351 1-220 (220)
8 2c0y_A Procathepsin S; proenzy 100.0 1.7E-61 5.7E-66 464.5 17.4 248 97-351 59-315 (315)
9 1cs8_A Human procathepsin L; p 100.0 5.3E-61 1.8E-65 461.2 18.4 249 97-351 58-316 (316)
10 1by8_A Protein (procathepsin K 100.0 3.8E-61 1.3E-65 461.8 16.6 250 97-351 58-314 (314)
11 3f5v_A DER P 1 allergen; aller 100.0 4.1E-60 1.4E-64 433.7 19.8 209 136-351 9-222 (222)
12 1ppo_A Protease omega; hydrola 100.0 2.3E-59 7.7E-64 427.3 22.4 207 137-351 1-215 (216)
13 1cqd_A Protein (protease II); 100.0 2.8E-59 9.7E-64 428.0 22.7 207 137-351 3-217 (221)
14 3f75_A Toxopain-2, cathepsin L 100.0 1.2E-59 4.1E-64 430.9 19.5 210 136-351 6-224 (224)
15 1pci_A Procaricain; zymogen, h 100.0 9.2E-60 3.2E-64 453.5 19.5 248 93-351 62-321 (322)
16 1m6d_A Cathepsin F, catsf; pap 100.0 2.1E-59 7.3E-64 426.8 20.7 207 137-351 1-213 (214)
17 3p5u_A Actinidin; SAD, cystein 100.0 2.8E-59 9.7E-64 427.6 21.5 209 137-351 1-217 (220)
18 1iwd_A Ervatamin B; cysteine p 100.0 6.7E-59 2.3E-63 423.9 23.1 206 137-351 1-214 (215)
19 3u8e_A Papain-like cysteine pr 100.0 1.8E-59 6.2E-64 429.5 19.3 209 137-351 1-219 (222)
20 1yal_A Chymopapain; hydrolase, 100.0 5.3E-59 1.8E-63 425.4 22.2 207 137-351 1-215 (218)
21 2b1m_A SPE31; papain-like, sug 100.0 5.9E-59 2E-63 432.4 22.3 209 137-351 2-224 (246)
22 1xkg_A DER P I, major mite fec 100.0 4.6E-59 1.6E-63 446.5 20.9 208 136-351 89-302 (312)
23 3i06_A Cruzipain; autocatalyti 100.0 1E-58 3.5E-63 422.6 20.9 205 137-351 1-214 (215)
24 2cio_A Papain; hydrolase/inhib 100.0 3.8E-58 1.3E-62 418.0 22.1 203 137-351 1-211 (212)
25 3pdf_A Cathepsin C, dipeptidyl 100.0 5.2E-58 1.8E-62 456.7 22.5 280 66-349 131-433 (441)
26 1o0e_A Ervatamin C; plant cyst 100.0 8.2E-58 2.8E-62 414.7 21.6 201 137-351 1-207 (208)
27 2bdz_A Mexicain; cysteine prot 100.0 7.7E-58 2.6E-62 416.6 21.4 203 137-351 1-211 (214)
28 2oul_A Falcipain 2; cysteine p 100.0 7.5E-58 2.6E-62 423.8 21.2 205 136-351 17-240 (241)
29 1s4v_A Cysteine endopeptidase; 100.0 8.6E-58 3E-62 420.3 21.5 208 137-351 2-219 (229)
30 3bwk_A Cysteine protease falci 100.0 8.5E-58 2.9E-62 423.9 20.3 206 135-351 18-242 (243)
31 2fo5_A Cysteine proteinase EP- 100.0 1E-57 3.5E-62 427.4 19.9 208 137-351 4-224 (262)
32 3ioq_A CMS1MS2; caricaceae, cy 100.0 1.8E-57 6.1E-62 413.8 19.6 203 137-351 1-211 (213)
33 3hhi_A Cathepsin B-like cystei 100.0 1.6E-57 5.5E-62 438.3 16.2 247 93-350 25-311 (325)
34 3tnx_A Papain; hydrolase, cyto 100.0 2.8E-57 9.4E-62 441.0 17.4 252 86-350 99-361 (363)
35 3pbh_A Procathepsin B; thiol p 100.0 9.7E-56 3.3E-60 424.7 17.4 211 135-350 62-313 (317)
36 3cbj_A Cathepsin B; cathepsin 100.0 1.8E-55 6.3E-60 413.4 17.8 208 136-350 6-256 (266)
37 1deu_A Procathepsin X; cystein 100.0 8.1E-55 2.8E-59 411.2 19.5 205 136-350 35-274 (277)
38 3qsd_A Cathepsin B-like peptid 100.0 3E-54 1E-58 402.5 19.5 209 136-350 2-252 (254)
39 2wbf_X Serine-repeat antigen p 100.0 1.8E-51 6.2E-56 385.8 20.8 208 137-349 9-256 (265)
40 3ois_A Cysteine protease; alph 100.0 4.9E-48 1.7E-52 367.3 14.1 194 136-336 56-272 (291)
41 2cb5_A Protein (bleomycin hydr 100.0 3.7E-39 1.3E-43 319.8 12.2 187 147-336 61-412 (453)
42 2e01_A Cysteine proteinase 1; 100.0 8.3E-37 2.8E-41 303.3 17.0 203 140-349 58-422 (457)
43 3pw3_A Aminopeptidase C; bleom 100.0 1.3E-33 4.3E-38 274.9 18.1 186 147-335 23-355 (383)
44 1pxv_A Cysteine protease; hydr 97.5 0.0022 7.4E-08 55.2 14.1 132 151-339 26-165 (183)
45 1x9y_A Cysteine proteinase; ha 97.3 0.004 1.4E-07 58.9 14.1 132 151-339 202-341 (367)
46 1cv8_A Staphopain; cysteine pr 97.1 0.028 9.7E-07 48.1 16.0 131 151-339 17-156 (174)
47 3erv_A Putative C39-like pepti 90.4 0.61 2.1E-05 42.1 7.2 66 245-321 124-196 (236)
48 4d8b_A Streptopain; papain fol 80.1 2.1 7.2E-05 39.1 5.3 54 253-335 171-226 (261)
49 2r9f_A Calpain-1 catalytic sub 58.6 17 0.0006 34.1 6.5 76 253-337 210-315 (339)
50 1ziv_A Calpain 9; cysteine pro 58.5 18 0.00061 34.0 6.6 62 253-323 209-274 (339)
51 2nqa_A Calpain 8; calpain, cal 55.5 23 0.00077 33.1 6.7 62 253-323 205-270 (326)
52 1dki_A Pyrogenic exotoxin B zy 54.7 22 0.00074 34.0 6.5 56 253-335 289-344 (371)
53 3bb7_A Interpain A; cysteine p 44.2 38 0.0013 31.6 6.3 60 254-335 239-298 (321)
54 3m4w_A Sigma-E factor regulato 43.8 62 0.0021 29.7 7.6 110 30-145 34-151 (295)
55 3bow_A Calpain-2 catalytic sub 36.6 54 0.0018 33.9 6.6 76 253-337 225-330 (714)
56 1qxp_A MU-like calpain; M-calp 24.0 61 0.0021 34.3 4.4 76 253-337 225-330 (900)
No 1
>3qt4_A Cathepsin-L-like midgut cysteine proteinase; hydrolase, zymogen, intramolecular DISS bonds, insect larVal midgut; HET: PG4 PG6; 2.11A {Tenebrio molitor}
Probab=100.00 E-value=2e-62 Score=472.83 Aligned_cols=250 Identities=37% Similarity=0.726 Sum_probs=216.9
Q ss_pred cccceeecCeeccceeeccccCc---ccceeE-EEEEccCCCCCCcCcceeecC--CCccccCCccCchhhhhhHHHHHH
Q psy3960 96 YIGEELVNGIILEKWRLVTSEGE---KVSKYS-LWVRYNKASKDAIPVRYEMKG--YNSLLDQSVCGSCWSFGTTGAVEG 169 (351)
Q Consensus 96 ~~~~~~~~g~~~~~~~~~~~~~~---~~~~~~-~~~~~~~~~~~plP~~~d~r~--~~~v~dQg~cGSCWAfA~~~alE~ 169 (351)
.+|++.|.|++.++|+. +.... ...... .-..... ...++|.+||||. ..+|+|||.||||||||++++||+
T Consensus 73 ~lg~N~FaDlt~eEf~~-~~g~~~~~~~~~~~~~~~~~~~-~~~~lP~~~DwR~~~vtpVkdQg~CGSCWAFaa~~alE~ 150 (329)
T 3qt4_A 73 SKAMNQFGDMSKEEFLA-YVNRGKAQKPKHPENLRMPYVS-SKKPLAASVDWRSNAVSEVKDQGQCGSSWSFSTTGAVEG 150 (329)
T ss_dssp EECCCGGGGCCHHHHHH-HHHHTCCC------CCEEECCC-CCSCCCSCEECTTTSCCCCCBCCSSBCHHHHHHHHHHHH
T ss_pred EEeccccccCCHHHHHH-hcCCcccccccccccccccccC-CccCCCCCEEccccccCCCccCCCCcChHHHHHHHHHHH
Confidence 47899999999999976 42111 000000 0011111 1246888888886 458899999999999999999999
Q ss_pred HHHHhcCCceecCHHHHhhhcCCCCCCCCCCCchHHHHHHHHHcCCCCCCCCCCCCCCCCccccCCCCceeeEeeEEEec
Q psy3960 170 AYYMKHKKLAVLSQQALIDCSWGYGNNGCDGGEDFRSYQWIMKHGLPTQDDYGPYLGQDAYCHIANTTATATMTGFVNVT 249 (351)
Q Consensus 170 ~~~~~~g~~~~LS~q~l~dc~~~~~~~gC~GG~~~~a~~~l~~~Gi~~e~~y~PY~~~~~~C~~~~~~~~~~i~~y~~v~ 249 (351)
++++++++++.||+|+|+||+..+++.||+||++..|++|+.++||++|++| ||.+.++.|+.......+++++|..++
T Consensus 151 ~~~i~~g~~~~LSeQ~LvdC~~~~g~~GC~GG~~~~a~~yi~~~Gi~~e~~y-PY~~~~~~C~~~~~~~~~~i~~~~~v~ 229 (329)
T 3qt4_A 151 QLALQRGRLTSLSEQNLIDCSSSYGNAGCDGGWMDSAFSYIHDYGIMSESAY-PYEAQGDYCRFDSSQSVTTLSGYYDLP 229 (329)
T ss_dssp HHHHHHSCCCCBCHHHHHHHCGGGTCCTTBCCCHHHHHHHHHHSCBCBTTTS-CCCSSCCCCCCCGGGCCBCCSEEEECC
T ss_pred HHHHHcCCcccCCHHHHHHhccccCCCCCCCCChhHHHHHHHHcCCCcHHHe-eeecCCCCCCCCcccceEEeceEEEec
Confidence 9999999999999999999997667899999999999999999999999999 999999999987777788999999998
Q ss_pred CCCHHHHHHHHHcCCCEEEEEEcCccccccccCcEEecCCCCCCCCCCCeEEEEEEEeeeCCeeEEEEEcCCCCCCCCCc
Q psy3960 250 PNSEDALKLALAKHGPVSVAIDASQKSFSFYVNGVYYDEKCNNSPDGLDHAVLAVGYGELDGKPYWQVKNSWSTYWGNQG 329 (351)
Q Consensus 250 ~~~~~~ik~aL~~~GPV~v~i~~~~~~f~~y~~Giy~~~~~~~~~~~~~HaV~iVGyg~~~g~~ywivkNSWG~~WG~~G 329 (351)
..++++||++|+++|||+|+|++. .+|++|++|||..+.|... .++|||+|||||+++|++|||||||||++||++|
T Consensus 230 ~~~e~~lk~al~~~GPV~v~i~a~-~~f~~Y~~GVy~~~~c~~~--~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~G 306 (329)
T 3qt4_A 230 SGDENSLADAVGQAGPVAVAIDAT-DELQFYSGGLFYDQTCNQS--DLNHGVLVVGYGSDNGQDYWILKNSWGSGWGESG 306 (329)
T ss_dssp TTCHHHHHHHHHHTCCEEEEECCC-GGGTTEEEEEECCSSCCSS--CCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTT
T ss_pred CCCHHHHHHHHHhCCCEEEEEecC-hhhhhccCceeecCCCCCC--cCCEEEEEEEEEeeCCccEEEEEeCCCCcccCCc
Confidence 889999999999999999999998 5999999999999888643 6899999999999999999999999999999999
Q ss_pred EEEEEecC-CeeeecCCcEEeeC
Q psy3960 330 YVLMSIKD-NNCGVMTAPTYVTM 351 (351)
Q Consensus 330 Y~~Is~~~-n~cgi~~~~~~~~~ 351 (351)
||||+|+. |.|||++.|+||+|
T Consensus 307 Y~~i~r~~~n~CgI~~~~~yp~v 329 (329)
T 3qt4_A 307 YWRQVRNYGNNCGIATAASYPAL 329 (329)
T ss_dssp EEEEESSSSSGGGTTTTCEEEEC
T ss_pred EEEEEeCCCCccCCCCceeEeeC
Confidence 99999987 99999999999986
No 2
>3kwz_A Cathepsin K; enzyme inhibitor, covalent reversible inhibitor, disease mutation, disulfide bond, glycoprotein, hydrolase, lysosome, protease; HET: KWZ; 1.49A {Homo sapiens} PDB: 1au0_A* 1au2_A* 1au3_A* 1au4_A* 1ayu_A* 1ayv_A* 1ayw_A* 1bgo_A* 1atk_A* 1nl6_A* 1nlj_A* 1q6k_A* 1mem_A* 1yk7_A* 1yk8_A* 1yt7_A* 2ato_A* 2aux_A* 2auz_A* 2bdl_A* ...
Probab=100.00 E-value=2.9e-61 Score=439.13 Aligned_cols=210 Identities=45% Similarity=0.879 Sum_probs=194.2
Q ss_pred cCcceeecC--C-CccccCCccCchhhhhhHHHHHHHHHHhcCCceecCHHHHhhhcCCCCCCCCCCCchHHHHHHHHHc
Q psy3960 137 IPVRYEMKG--Y-NSLLDQSVCGSCWSFGTTGAVEGAYYMKHKKLAVLSQQALIDCSWGYGNNGCDGGEDFRSYQWIMKH 213 (351)
Q Consensus 137 lP~~~d~r~--~-~~v~dQg~cGSCWAfA~~~alE~~~~~~~g~~~~LS~q~l~dc~~~~~~~gC~GG~~~~a~~~l~~~ 213 (351)
+|.+||+|. + .+|+|||.||||||||++++||+++++++++.++||+|+|+||+. .+.||+||++..|++|+.++
T Consensus 1 lP~~~Dwr~~~~v~pvkdQg~cGsCWAfa~~~~~e~~~~~~~~~~~~lS~q~l~dc~~--~~~gC~GG~~~~a~~~~~~~ 78 (215)
T 3kwz_A 1 APDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVS--ENDGCGGGYMTNAFQYVQKN 78 (215)
T ss_dssp CTTCEETTTTTCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT--TSCTTBCCCHHHHHHHHHHH
T ss_pred CCCCCccCcCCCCCCcccCCCCcHHHHHHHHHHHHHHHHHHcCCCcccCHHHHHHhcC--CCCCCCCCCHHHHHHHHHHh
Confidence 466666665 3 488999999999999999999999999999999999999999996 68899999999999999988
Q ss_pred -CCCCCCCCCCCCCCCCccccCCCCceeeEeeEEEecCCCHHHHHHHHHcCCCEEEEEEcCccccccccCcEEecCCCCC
Q psy3960 214 -GLPTQDDYGPYLGQDAYCHIANTTATATMTGFVNVTPNSEDALKLALAKHGPVSVAIDASQKSFSFYVNGVYYDEKCNN 292 (351)
Q Consensus 214 -Gi~~e~~y~PY~~~~~~C~~~~~~~~~~i~~y~~v~~~~~~~ik~aL~~~GPV~v~i~~~~~~f~~y~~Giy~~~~~~~ 292 (351)
|+++|++| ||.+.++.|+.......+++++|..++..++++||++|+++|||+++|++.+++|++|++|||..+.|..
T Consensus 79 ~Gi~~e~~y-PY~~~~~~C~~~~~~~~~~i~~~~~v~~~~~~~ik~~l~~~gPV~v~~~~~~~~f~~y~~Giy~~~~~~~ 157 (215)
T 3kwz_A 79 RGIDSEDAY-PYVGQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNS 157 (215)
T ss_dssp TCEEBTTTS-CCCSSCCCCCCCGGGEEECCCCEEECCTTCHHHHHHHHHHTCCEEEEECCCSHHHHTCCSSEECCTTCCT
T ss_pred CCccccccC-CCccCCCccccCCCCceeEecceEEeCCCCHHHHHHHHHHCCCEEEEEeechhhhhcccCCeECCCCCCC
Confidence 99999999 9999999999877777889999999987799999999999999999999986799999999999888854
Q ss_pred CCCCCCeEEEEEEEeeeCCeeEEEEEcCCCCCCCCCcEEEEEecC-CeeeecCCcEEeeC
Q psy3960 293 SPDGLDHAVLAVGYGELDGKPYWQVKNSWSTYWGNQGYVLMSIKD-NNCGVMTAPTYVTM 351 (351)
Q Consensus 293 ~~~~~~HaV~iVGyg~~~g~~ywivkNSWG~~WG~~GY~~Is~~~-n~cgi~~~~~~~~~ 351 (351)
. .++|||+|||||++++++|||||||||++||++|||||+|+. |.|||++.++||+|
T Consensus 158 ~--~~~HaV~iVGyg~~~g~~yWivkNSWG~~WG~~Gy~~i~r~~~n~Cgi~~~~~~p~~ 215 (215)
T 3kwz_A 158 D--NLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM 215 (215)
T ss_dssp T--CCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEESSSSSGGGTTSSCEEECC
T ss_pred C--hhhCEEEEEEEeccCCceEEEEECCcCcccccCCEEEEecCCCCccCcCCceeeeeC
Confidence 3 689999999999999999999999999999999999999986 89999999999986
No 3
>8pch_A Cathepsin H; hydrolase, protease, cysteine proteinase, aminopeptidase; HET: NAG BMA; 2.10A {Sus scrofa} SCOP: d.3.1.1 PDB: 1nb3_A* 1nb5_A*
Probab=100.00 E-value=2.6e-61 Score=440.96 Aligned_cols=212 Identities=40% Similarity=0.809 Sum_probs=196.2
Q ss_pred cCcceeec--C--CCccccCCccCchhhhhhHHHHHHHHHHhcCCceecCHHHHhhhcCCCCCCCCCCCchHHHHHHHHH
Q psy3960 137 IPVRYEMK--G--YNSLLDQSVCGSCWSFGTTGAVEGAYYMKHKKLAVLSQQALIDCSWGYGNNGCDGGEDFRSYQWIMK 212 (351)
Q Consensus 137 lP~~~d~r--~--~~~v~dQg~cGSCWAfA~~~alE~~~~~~~g~~~~LS~q~l~dc~~~~~~~gC~GG~~~~a~~~l~~ 212 (351)
+|.+||+| + ..+|+||+.||||||||++++||+++++++++.++||+|+|+||+....+.||+||++..|++|+++
T Consensus 1 lP~~~DwR~~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dc~~~~~~~gC~GG~~~~a~~~~~~ 80 (220)
T 8pch_A 1 YPPSMDWRKKGNFVSPVKNQGSCGSCWTFSTTGALESAVAIATGKMLSLAEQQLVDCAQNFNNHGCQGGLPSQAFEYIRY 80 (220)
T ss_dssp CCSCEEHHHHSSCSCCCCBCTTSCCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHGGGGTCCGGGCCCHHHHHHHHHH
T ss_pred CCCCEecCcCCCcCCcccccCCCchHHHHHHHHHHHHHHHHHcCCCCCCCHHHHhhCcCccCCCCCCCCCHHHHHHHHHH
Confidence 35556666 4 3588999999999999999999999999999999999999999997666899999999999999999
Q ss_pred c-CCCCCCCCCCCCCCCCccccCCCCceeeEeeEEEecCCCHHHHHHHHHcCCCEEEEEEcCccccccccCcEEecCCCC
Q psy3960 213 H-GLPTQDDYGPYLGQDAYCHIANTTATATMTGFVNVTPNSEDALKLALAKHGPVSVAIDASQKSFSFYVNGVYYDEKCN 291 (351)
Q Consensus 213 ~-Gi~~e~~y~PY~~~~~~C~~~~~~~~~~i~~y~~v~~~~~~~ik~aL~~~GPV~v~i~~~~~~f~~y~~Giy~~~~~~ 291 (351)
+ |+++|++| ||.+.++.|+.......+++++|..++..++++||++|+++|||+++|+++ ++|++|++|||..+.|.
T Consensus 81 ~~Gi~~e~~y-PY~~~~~~C~~~~~~~~~~i~~~~~v~~~~~~~ik~~l~~~gPV~~~~~~~-~~f~~Y~~Giy~~~~~~ 158 (220)
T 8pch_A 81 NKGIMGEDTY-PYKGQDDHCKFQPDKAIAFVKDVANITMNDEEAMVEAVALYNPVSFAFEVT-NDFLMYRKGIYSSTSCH 158 (220)
T ss_dssp HTCEEBTTTS-CCCSSCCCCCCCGGGEEECEEEEEECCTTCHHHHHHHHHHTCCEEEEECCC-HHHHTCCSSEECCSSCC
T ss_pred cCCcCccccc-CccCCCCCCCCCCCcceEEeCCEEEeCCCCHHHHHHHHHhcCCEEEEEEec-cchhhcCCCcccCCcCC
Confidence 8 99999999 999999999987777788999999998889999999999999999999998 69999999999988887
Q ss_pred CCCCCCCeEEEEEEEeeeCCeeEEEEEcCCCCCCCCCcEEEEEecCCeeeecCCcEEee
Q psy3960 292 NSPDGLDHAVLAVGYGELDGKPYWQVKNSWSTYWGNQGYVLMSIKDNNCGVMTAPTYVT 350 (351)
Q Consensus 292 ~~~~~~~HaV~iVGyg~~~g~~ywivkNSWG~~WG~~GY~~Is~~~n~cgi~~~~~~~~ 350 (351)
.....++|||+|||||+++|++|||||||||++||++|||||+|+.|.|||+++++||+
T Consensus 159 ~~~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~n~cgi~~~~~~~~ 217 (220)
T 8pch_A 159 KTPDKVNHAVLAVGYGEENGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASYPI 217 (220)
T ss_dssp CSTTTCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSSCGGGTTTSCEEEE
T ss_pred CCCCcCCcEEEEEEEEccCCeeEEEEECCCCcCcccCCEEEEEcCCCccccCCCceeEe
Confidence 65457899999999999999999999999999999999999999999999999999997
No 4
>3qj3_A Cathepsin L-like protein; hydrolase, proteinase, larVal midgut; 1.85A {Tenebrio molitor} SCOP: d.3.1.0
Probab=100.00 E-value=2e-61 Score=466.48 Aligned_cols=250 Identities=30% Similarity=0.598 Sum_probs=214.6
Q ss_pred cccceeecCeeccceeeccccCc----ccceeEEEEEcc---CCCCCCcCcceeecC--C-CccccCCccCchhhhhhHH
Q psy3960 96 YIGEELVNGIILEKWRLVTSEGE----KVSKYSLWVRYN---KASKDAIPVRYEMKG--Y-NSLLDQSVCGSCWSFGTTG 165 (351)
Q Consensus 96 ~~~~~~~~g~~~~~~~~~~~~~~----~~~~~~~~~~~~---~~~~~plP~~~d~r~--~-~~v~dQg~cGSCWAfA~~~ 165 (351)
.++++.|.|++.++|+..+.... .......+.... ......+|.+||||. + .+|+|||.||||||||+++
T Consensus 68 ~lg~N~FaDlt~eEf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~s~DwR~~g~vtpVkdQg~CGSCWAFaa~~ 147 (331)
T 3qj3_A 68 TLGVNLFTDMTPEEMKAYTHGLIMPADLHKNGIPIKTREDLGLNASVRYPASFDWRDQGMVSPVKNQGSCGSSWAFSSTG 147 (331)
T ss_dssp EECCSTTTTCCHHHHHHHHSCCCCCSSTTTTCEEECSGGGGTCCSSCCCCSSEEGGGGTCSCCCCBCCSSCCHHHHHHHH
T ss_pred eecccccccCCHHHHHHHhccccccccccccCcccccccccccccccCCCcceecccCCccCCCccCcccchhhHHHHHH
Confidence 37899999999999976543111 111111111110 001235677777774 4 4889999999999999999
Q ss_pred HHHHHHHHhcCC--ceecCHHHHhhhcCCCCCCCCCCCchHHHHHHHHHc-CCCCCCCCCCCCCCCCccccCCCCceeeE
Q psy3960 166 AVEGAYYMKHKK--LAVLSQQALIDCSWGYGNNGCDGGEDFRSYQWIMKH-GLPTQDDYGPYLGQDAYCHIANTTATATM 242 (351)
Q Consensus 166 alE~~~~~~~g~--~~~LS~q~l~dc~~~~~~~gC~GG~~~~a~~~l~~~-Gi~~e~~y~PY~~~~~~C~~~~~~~~~~i 242 (351)
+||+++++++++ ++.||+|+|+||+.. +.||+||++..|++|+.++ ||++|++| ||.+.++.|+.......+++
T Consensus 148 alE~~~~i~~g~~~~~~LSeQ~LvdC~~~--~~GC~GG~~~~a~~yi~~~~Gi~~e~~y-PY~~~~~~C~~~~~~~~~~i 224 (331)
T 3qj3_A 148 AIESQMKIANGAGYDSSVSEQQLVDCVPN--ALGCSGGWMNDAFTYVAQNGGIDSEGAY-PYEMADGNCHYDPNQVAARL 224 (331)
T ss_dssp HHHHHHHHHHCTTSCCCBCHHHHHHHCTT--SCGGGCCCHHHHHHHHHHHTCEEBTTTS-CCCSSCCCCCCCTTSEEECC
T ss_pred HHHHHHHHHhCCCcccCcCHHHHhhhccC--CCCCCCCCHHHHHHHHHHcCCcCccccc-CccCCCCCCCCCcccceeEe
Confidence 999999999998 899999999999963 8899999999999999999 99999999 99999999998888888999
Q ss_pred eeEEEecCCCHHHHHHHHHcCCCEEEEEEcCccccccccCcEEecCCCCCCCCCCCeEEEEEEEeeeCCeeEEEEEcCCC
Q psy3960 243 TGFVNVTPNSEDALKLALAKHGPVSVAIDASQKSFSFYVNGVYYDEKCNNSPDGLDHAVLAVGYGELDGKPYWQVKNSWS 322 (351)
Q Consensus 243 ~~y~~v~~~~~~~ik~aL~~~GPV~v~i~~~~~~f~~y~~Giy~~~~~~~~~~~~~HaV~iVGyg~~~g~~ywivkNSWG 322 (351)
++|..++..++++||++|+++|||+|+|++.. .|++|++|||..+.|... .++|||+|||||+++|++|||||||||
T Consensus 225 ~~~~~v~~~~e~~lk~al~~~GPV~v~i~a~~-~f~~Y~~Gvy~~~~c~~~--~~~HaV~iVGyg~~~g~~yWivkNSWG 301 (331)
T 3qj3_A 225 SGYVYLSGPDENMLADMVATKGPVAVAFDADD-PFGSYSGGVYYNPTCETN--KFTHAVLIVGYGNENGQDYWLVKNSWG 301 (331)
T ss_dssp SEEEEESSCCHHHHHHHHHHHCCEEEEECCCT-TGGGEEEEEECCTTCCSS--CCCEEEEEEEEEEETTEEEEEEECSBC
T ss_pred eEEEEeCCCCHHHHHHHHHhCCCEEEEEEccc-ccccccCceEeCCCCCCC--cCCEEEEEEEEeccCCceEEEEEcCCC
Confidence 99999988899999999999999999999984 499999999999888643 689999999999999999999999999
Q ss_pred CCCCCCcEEEEEecC-CeeeecCCcEEeeC
Q psy3960 323 TYWGNQGYVLMSIKD-NNCGVMTAPTYVTM 351 (351)
Q Consensus 323 ~~WG~~GY~~Is~~~-n~cgi~~~~~~~~~ 351 (351)
++||++|||||+|+. |.|||++.++||+|
T Consensus 302 ~~WGe~GY~~i~r~~~n~CgI~~~~~~p~v 331 (331)
T 3qj3_A 302 DGWGLDGYFKIARNANNHCGIAGVASVPTL 331 (331)
T ss_dssp TTSTBTTEEEEECSSSSGGGTTTSCEEEEC
T ss_pred CCcCCCCEEEEEcCCCCccCcCCceeeeeC
Confidence 999999999999987 99999999999986
No 5
>3ovx_A Cathepsin S; hydrolase, covalent inhibitor, aldehyde warhead is covalently bound to Cys25, lysosomeal protein; HET: O64; 1.49A {Homo sapiens} SCOP: d.3.1.1 PDB: 2h7j_A* 2f1g_A* 2hh5_B* 2hhn_A* 2hxz_A* 2op3_A* 2frq_A* 2fra_A* 2fq9_A* 2ft2_A* 2fud_A* 2g7y_A* 1ms6_A* 2r9m_A* 2r9n_A* 2r9o_A* 3n3g_A* 3n4c_A* 3mpe_A* 1nqc_A* ...
Probab=100.00 E-value=3.6e-61 Score=439.39 Aligned_cols=211 Identities=40% Similarity=0.830 Sum_probs=194.5
Q ss_pred cCcceeecC--C-CccccCCccCchhhhhhHHHHHHHHHHhcCCceecCHHHHhhhc-CCCCCCCCCCCchHHHHHHHHH
Q psy3960 137 IPVRYEMKG--Y-NSLLDQSVCGSCWSFGTTGAVEGAYYMKHKKLAVLSQQALIDCS-WGYGNNGCDGGEDFRSYQWIMK 212 (351)
Q Consensus 137 lP~~~d~r~--~-~~v~dQg~cGSCWAfA~~~alE~~~~~~~g~~~~LS~q~l~dc~-~~~~~~gC~GG~~~~a~~~l~~ 212 (351)
+|.+||+|. + .||+||+.||||||||++++||+++++++++.++||+|+|++|+ +..++.||+||++..|++|+.+
T Consensus 2 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~~c~~~~~~~~gC~GG~~~~a~~~~~~ 81 (218)
T 3ovx_A 2 LPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYIID 81 (218)
T ss_dssp CCSCEEGGGGTCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHSCGGGTCCGGGCCCHHHHHHHHHH
T ss_pred CCCCCCcccCCCCCCCccCCCCccHHHHHHHHHHHHHHHHHcCCccccCHHHheeccCCcCCCCCCCCCCHHHHHHHHHH
Confidence 566666665 4 48899999999999999999999999999999999999999998 5556899999999999999976
Q ss_pred -cCCCCCCCCCCCCCCCCccccCCCCceeeEeeEEEecCCCHHHHHHHHHcCCCEEEEEEcCccccccccCcEEecCCCC
Q psy3960 213 -HGLPTQDDYGPYLGQDAYCHIANTTATATMTGFVNVTPNSEDALKLALAKHGPVSVAIDASQKSFSFYVNGVYYDEKCN 291 (351)
Q Consensus 213 -~Gi~~e~~y~PY~~~~~~C~~~~~~~~~~i~~y~~v~~~~~~~ik~aL~~~GPV~v~i~~~~~~f~~y~~Giy~~~~~~ 291 (351)
+|+++|++| ||.+.++.|+.......+++.+|..++..++++||++|+++|||+++|++..++|++|++|||..+.|.
T Consensus 82 ~~Gi~~e~~y-PY~~~~~~C~~~~~~~~~~i~~~~~~~~~~~~~ik~~l~~~gPV~v~~~~~~~~f~~y~~Giy~~~~~~ 160 (218)
T 3ovx_A 82 NKGIDSDASY-PYKAMDQKCQYDSKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSCT 160 (218)
T ss_dssp HTCEEBTTTS-CCCSSCCCCCCCGGGEEECCCEEEECCTTCHHHHHHHHHHTCCEEEEECCCSHHHHHCCSSEECCTTCC
T ss_pred hCCcCccccc-CccCCCCcccCCCccceeeeccEEEeCCCCHHHHHHHHHhcCCEEEEEEecchhhhcccCceecCCCCC
Confidence 699999999 999999999987777888999999998789999999999999999999998668999999999988883
Q ss_pred CCCCCCCeEEEEEEEeeeCCeeEEEEEcCCCCCCCCCcEEEEEecC-CeeeecCCcEEeeC
Q psy3960 292 NSPDGLDHAVLAVGYGELDGKPYWQVKNSWSTYWGNQGYVLMSIKD-NNCGVMTAPTYVTM 351 (351)
Q Consensus 292 ~~~~~~~HaV~iVGyg~~~g~~ywivkNSWG~~WG~~GY~~Is~~~-n~cgi~~~~~~~~~ 351 (351)
. .++|||+|||||+++|++|||||||||++||++|||||+|+. |+|||+++++||+|
T Consensus 161 ~---~~~HaV~iVGyg~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~n~cgi~~~~~~p~~ 218 (218)
T 3ovx_A 161 Q---NVNHGVLVVGYGDLNGKEYWLVKNSWGHNFGEEGYIRMARNKGNHCGIASFPSYPEI 218 (218)
T ss_dssp S---CCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSSSSGGGTTTSCEEEEC
T ss_pred c---ccCcEEEEEEEeccCCceEEEEECCCCCccccCCEEEEecCCCCcccccCceeeeeC
Confidence 3 689999999999999999999999999999999999999987 99999999999986
No 6
>2o6x_A Procathepsin L1, secreted cathepsin L 1; hydrolase, thiol protease, cysteine protease, zymogen, hydro; 1.40A {Fasciola hepatica}
Probab=100.00 E-value=1.5e-61 Score=463.72 Aligned_cols=247 Identities=34% Similarity=0.695 Sum_probs=210.0
Q ss_pred ccceeecCeeccceeecccc--Cc-ccc--eeEEEEEccCCCCCCcCcceeecC--C-CccccCCccCchhhhhhHHHHH
Q psy3960 97 IGEELVNGIILEKWRLVTSE--GE-KVS--KYSLWVRYNKASKDAIPVRYEMKG--Y-NSLLDQSVCGSCWSFGTTGAVE 168 (351)
Q Consensus 97 ~~~~~~~g~~~~~~~~~~~~--~~-~~~--~~~~~~~~~~~~~~plP~~~d~r~--~-~~v~dQg~cGSCWAfA~~~alE 168 (351)
++.+.|.|++.++|...+.. .. ... ... .... ....+|.+||+|. . .+|+|||.||||||||++++||
T Consensus 51 ~g~N~F~Dlt~eEf~~~~~g~~~~~~~~~~~~~---~~~~-~~~~lP~~~DwR~~g~vtpVkdQg~CGSCWAfa~~~alE 126 (310)
T 2o6x_A 51 LGLNQFTDMTFEEFKAKYLTEMSRASDILSHGV---PYEA-NNRAVPDKIDWRESGYVTEVKDQGNCGSGWAFSTTGTME 126 (310)
T ss_dssp ECCCTTTTSCHHHHHHHHCCCCCCGGGGSCSSE---ECCC-----CCSCEEGGGGTCCCCCCBCCSSCCHHHHHHHHHHH
T ss_pred EeccccCCCCHHHHHHHhcCCCCCcccccccCC---cccc-ccCCCCCeEecCcCCCCCCcccCCCCCccHHHHhHHHHH
Confidence 47888999998888643321 11 000 001 0111 1124777777775 3 4889999999999999999999
Q ss_pred HHHHHhcCCceecCHHHHhhhcCCCCCCCCCCCchHHHHHHHHHcCCCCCCCCCCCCCCCCccccCCCCceeeEeeEEEe
Q psy3960 169 GAYYMKHKKLAVLSQQALIDCSWGYGNNGCDGGEDFRSYQWIMKHGLPTQDDYGPYLGQDAYCHIANTTATATMTGFVNV 248 (351)
Q Consensus 169 ~~~~~~~g~~~~LS~q~l~dc~~~~~~~gC~GG~~~~a~~~l~~~Gi~~e~~y~PY~~~~~~C~~~~~~~~~~i~~y~~v 248 (351)
+++++++++.+.||+|+|+||+..+++.||+||++..|++|+.+.||++|++| ||.+.++.|+.......++|++|..|
T Consensus 127 ~~~~i~~g~~~~LS~q~lvdC~~~~~~~gC~GG~~~~a~~yi~~~Gi~~e~~y-PY~~~~~~C~~~~~~~~~~i~~~~~v 205 (310)
T 2o6x_A 127 GQYMKNERTSISFSEQQLVDCSRPWGNNGCGGGLMENAYQYLKQFGLETESSY-PYTAVEGQCRYNKQLGVAKVTGFYTV 205 (310)
T ss_dssp HHHHHHHSSCCCBCHHHHHHHCGGGTCCGGGCCCHHHHHHHHTTSCBCBTTTS-CCCSSCCCCCCCGGGCCEEEEEEEEE
T ss_pred HHHHHHhCCCcCcCHHHHHHhhhccCCCCCCCCCHHHHHHHHHHCCcCchhcC-CCCCCCCCccCCCCCCceEeCeEEEe
Confidence 99999999999999999999996556899999999999999997799999999 99999999997666667899999999
Q ss_pred cCCCHHHHHHHHHcCCCEEEEEEcCccccccccCcEEecCCCCCCCCCCCeEEEEEEEeeeCCeeEEEEEcCCCCCCCCC
Q psy3960 249 TPNSEDALKLALAKHGPVSVAIDASQKSFSFYVNGVYYDEKCNNSPDGLDHAVLAVGYGELDGKPYWQVKNSWSTYWGNQ 328 (351)
Q Consensus 249 ~~~~~~~ik~aL~~~GPV~v~i~~~~~~f~~y~~Giy~~~~~~~~~~~~~HaV~iVGyg~~~g~~ywivkNSWG~~WG~~ 328 (351)
+..++++||++|+++|||+|+|+++ ++|++|++|||..+.|+.. .++|||+|||||+++|++|||||||||++||++
T Consensus 206 ~~~~~~~i~~~l~~~GPV~v~i~~~-~~f~~Y~~Gvy~~~~c~~~--~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~ 282 (310)
T 2o6x_A 206 HSGSEVELKNLVGAEGPAAVAVDVE-SDFMMYRSGIYQSQTCSPL--RVNHAVLAVGYGTQGGTDYWIVKNSWGLSWGER 282 (310)
T ss_dssp CSCCHHHHHHHHHHHCCEEEEECCC-HHHHTEEEEEECCSSCCTT--CCCEEEEEEEEEEETTEEEEEEECSBCTTSTBT
T ss_pred CCCCHHHHHHHHHhcCCeEEEEecc-hhhhhCCCceecCCCCCCC--CCCEEEEEEEEeccCCceEEEEEeCCCCccCCC
Confidence 8789999999999999999999998 6999999999998888643 689999999999999999999999999999999
Q ss_pred cEEEEEecC-CeeeecCCcEEeeC
Q psy3960 329 GYVLMSIKD-NNCGVMTAPTYVTM 351 (351)
Q Consensus 329 GY~~Is~~~-n~cgi~~~~~~~~~ 351 (351)
|||||+|+. |.|||+++++||++
T Consensus 283 GY~~i~r~~~n~Cgi~~~~~~p~~ 306 (310)
T 2o6x_A 283 GYIRMVRNRGNMCGIASLASLPMV 306 (310)
T ss_dssp TEEEEECSSSSGGGTTTSEEEEEE
T ss_pred cEEEEEcCCCCcCCccceeeEEEe
Confidence 999999986 88999999999974
No 7
>2xu3_A Cathepsin L1; hydrolase, drug design, thiol protease; HET: XU3 BTB; 0.90A {Homo sapiens} PDB: 2xu4_A* 2xu5_A* 2yj2_A* 2yj8_A* 2yj9_A* 2yjb_A* 2yjc_A* 3bc3_A* 3h89_A* 3h8b_A* 3h8c_A* 3of9_A* 3of8_A* 3hha_A* 2xu1_A* 3iv2_A* 3k24_A* 2nqd_B* 3kse_A* 2vhs_A ...
Probab=100.00 E-value=1e-60 Score=437.16 Aligned_cols=211 Identities=43% Similarity=0.855 Sum_probs=191.6
Q ss_pred cCcceeecC--C-CccccCCccCchhhhhhHHHHHHHHHHhcCCceecCHHHHhhhcCCCCCCCCCCCchHHHHHHHH-H
Q psy3960 137 IPVRYEMKG--Y-NSLLDQSVCGSCWSFGTTGAVEGAYYMKHKKLAVLSQQALIDCSWGYGNNGCDGGEDFRSYQWIM-K 212 (351)
Q Consensus 137 lP~~~d~r~--~-~~v~dQg~cGSCWAfA~~~alE~~~~~~~g~~~~LS~q~l~dc~~~~~~~gC~GG~~~~a~~~l~-~ 212 (351)
+|.+||+|. + .+|+||+.||||||||++++||+++++++++.++||+|+|+||+..+++.||+||++..|++|+. +
T Consensus 1 lP~~~DwR~~~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~~g~~gC~GG~~~~a~~y~~~~ 80 (220)
T 2xu3_A 1 APRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDN 80 (220)
T ss_dssp CCSCEEGGGGTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTTTTCCTTBCCCHHHHHHHHHHH
T ss_pred CCCcEeCCCCCCCCCCcccCcccHHHHHHhHHHHHHHHHHhcCCceecCHHHHHhhccCCCCCCCCCCCHHHHHHHHHHh
Confidence 466666664 4 48899999999999999999999999999999999999999999766689999999999999996 6
Q ss_pred cCCCCCCCCCCCCCCCCccccCCCCceeeEeeEEEecCCCHHHHHHHHHcCCCEEEEEEcCccccccccCcEEecCCCCC
Q psy3960 213 HGLPTQDDYGPYLGQDAYCHIANTTATATMTGFVNVTPNSEDALKLALAKHGPVSVAIDASQKSFSFYVNGVYYDEKCNN 292 (351)
Q Consensus 213 ~Gi~~e~~y~PY~~~~~~C~~~~~~~~~~i~~y~~v~~~~~~~ik~aL~~~GPV~v~i~~~~~~f~~y~~Giy~~~~~~~ 292 (351)
+|+++|++| ||.+.++.|+.......+++++|..++. ++++||++|+++|||+++|++..++|++|++|||..+.|..
T Consensus 81 ~Gi~~e~~y-PY~~~~~~C~~~~~~~~~~i~~~~~v~~-~~~~ik~~l~~~GPV~v~~~~~~~~f~~Y~~Gvy~~~~c~~ 158 (220)
T 2xu3_A 81 GGLDSEESY-PYEATEESCKYNPKYSVANDTGFVDIPK-QEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSS 158 (220)
T ss_dssp TCEEBTTTS-CCCSSCCCCCCCGGGEEECCSEEEECCS-CHHHHHHHHHHTCCEEEEECCCSHHHHTCCSSEECCTTCCS
T ss_pred CCccccccc-CCcccCcCccCCCCCcceeeeeEEEeCC-CHHHHHHHHHhcCCEEEEEeecCcccccccceEEcCCCCCC
Confidence 799999999 9999999998766667789999999977 89999999999999999999985689999999998877864
Q ss_pred CCCCCCeEEEEEEEe----eeCCeeEEEEEcCCCCCCCCCcEEEEEecC-CeeeecCCcEEeeC
Q psy3960 293 SPDGLDHAVLAVGYG----ELDGKPYWQVKNSWSTYWGNQGYVLMSIKD-NNCGVMTAPTYVTM 351 (351)
Q Consensus 293 ~~~~~~HaV~iVGyg----~~~g~~ywivkNSWG~~WG~~GY~~Is~~~-n~cgi~~~~~~~~~ 351 (351)
. .++|||+||||| +++|++|||||||||++||++|||||+|+. |.|||+++++||++
T Consensus 159 ~--~~~HaV~iVGygd~~~~~~g~~yWivkNSWG~~WG~~Gy~~i~~~~~n~Cgi~~~~~~p~~ 220 (220)
T 2xu3_A 159 E--DMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAASYPTV 220 (220)
T ss_dssp S--CCCEEEEEEEEEECCCSSSCCEEEEEECSBCTTSTBTTEEEEECSSSSGGGTTTSCEEEEC
T ss_pred C--CCCeEEEEEEcCCccccCCCCcEEEEEeCCCCCcccCcEEEEecCCCCcCCccccceeeeC
Confidence 3 689999999999 567899999999999999999999999986 88999999999986
No 8
>2c0y_A Procathepsin S; proenzyme, proteinase, hydrolase, thiol protease, prosegment binding loop, glycoprotein, lysosome, protease, zymogen; 2.1A {Homo sapiens}
Probab=100.00 E-value=1.7e-61 Score=464.48 Aligned_cols=248 Identities=35% Similarity=0.708 Sum_probs=210.6
Q ss_pred ccceeecCeeccceeeccccC---cccceeEEEEEccCCCCCCcCcceeecC---CCccccCCccCchhhhhhHHHHHHH
Q psy3960 97 IGEELVNGIILEKWRLVTSEG---EKVSKYSLWVRYNKASKDAIPVRYEMKG---YNSLLDQSVCGSCWSFGTTGAVEGA 170 (351)
Q Consensus 97 ~~~~~~~g~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~plP~~~d~r~---~~~v~dQg~cGSCWAfA~~~alE~~ 170 (351)
++++.|.|++.++|...+... ....... .........+|.+||+|. ..+|+|||.||||||||++++||++
T Consensus 59 ~g~N~FaDlt~eEf~~~~~g~~~~~~~~~~~---~~~~~~~~~lP~~~DwR~~g~vtpVkdQg~CGSCWAfs~~~alE~~ 135 (315)
T 2c0y_A 59 LGMNHLGDMTSEEVMSLMSSLRVPSQWQRNI---TYKSNPNRILPDSVDWREKGCVTEVKYQGSCGAAWAFSAVGALEAQ 135 (315)
T ss_dssp ECCCGGGGCCHHHHHHHTTSBCCCCGGGSCB---CC------CCCSCEETTTTTCCCCCCBCTTSCCHHHHHHHHHHHHH
T ss_pred eccCccccCCHHHHHHHhcCCCCCccccCCc---cccCcccCCCCCeEecCCCCCcCCCcCcccCCCcHHHHHHHHHHHH
Confidence 578889999998885433211 0000000 000111235788888775 3488999999999999999999999
Q ss_pred HHHhcCCceecCHHHHhhhc-CCCCCCCCCCCchHHHHHHHHH-cCCCCCCCCCCCCCCCCccccCCCCceeeEeeEEEe
Q psy3960 171 YYMKHKKLAVLSQQALIDCS-WGYGNNGCDGGEDFRSYQWIMK-HGLPTQDDYGPYLGQDAYCHIANTTATATMTGFVNV 248 (351)
Q Consensus 171 ~~~~~g~~~~LS~q~l~dc~-~~~~~~gC~GG~~~~a~~~l~~-~Gi~~e~~y~PY~~~~~~C~~~~~~~~~~i~~y~~v 248 (351)
+++++|+.+.||+|+|+||+ ..+++.||+||++..|++|+.+ .||++|++| ||.+.++.|+.......++|++|..+
T Consensus 136 ~~i~~g~~~~LSeq~lvdC~~~~~~~~gC~GG~~~~a~~yi~~~~Gi~~e~~y-PY~~~~~~C~~~~~~~~~~i~~~~~v 214 (315)
T 2c0y_A 136 LKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYIIDNKGIDSDASY-PYKAMDQKCQYDSKYRAATCSKYTEL 214 (315)
T ss_dssp HHHHHSCCCCBCHHHHHHHSCGGGTCCGGGCBCHHHHHHHHHHHTCEEBTTTS-CCCSSCCCCCCCGGGEEECCCEEEEC
T ss_pred HHHHhCCCcCcCHHHHHhhcccccCCCCCCCCCHHHHHHHHHHhCCcCchhcC-CCccCCCCcccCCcccccccCCeEEe
Confidence 99999999999999999998 5556899999999999999995 699999999 99999999997666667899999999
Q ss_pred cCCCHHHHHHHHHcCCCEEEEEEcCccccccccCcEEecCCCCCCCCCCCeEEEEEEEeeeCCeeEEEEEcCCCCCCCCC
Q psy3960 249 TPNSEDALKLALAKHGPVSVAIDASQKSFSFYVNGVYYDEKCNNSPDGLDHAVLAVGYGELDGKPYWQVKNSWSTYWGNQ 328 (351)
Q Consensus 249 ~~~~~~~ik~aL~~~GPV~v~i~~~~~~f~~y~~Giy~~~~~~~~~~~~~HaV~iVGyg~~~g~~ywivkNSWG~~WG~~ 328 (351)
+..++++||++|+++|||+|+|++++++|++|++|||..+.|+. .++|||+|||||+++|++|||||||||++||++
T Consensus 215 ~~~~~~~i~~al~~~GPV~v~i~~~~~~f~~Y~~Gvy~~~~c~~---~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~ 291 (315)
T 2c0y_A 215 PYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSCTQ---NVNHGVLVVGYGDLNGKEYWLVKNSWGHNFGEE 291 (315)
T ss_dssp CTTCHHHHHHHHHHTCCEEEEECCCSHHHHTEEEEEECCTTCCS---CCCEEEEEEEEEEETTEEEEEEECSBCTTSTBT
T ss_pred CCCCHHHHHHHHHHcCCEEEEEecCchhhhccCCCcccCCCCCC---cCCEEEEEEEEeecCCCcEEEEEcCCCCCcCCC
Confidence 88899999999999999999999986789999999999888865 689999999999999999999999999999999
Q ss_pred cEEEEEec-CCeeeecCCcEEeeC
Q psy3960 329 GYVLMSIK-DNNCGVMTAPTYVTM 351 (351)
Q Consensus 329 GY~~Is~~-~n~cgi~~~~~~~~~ 351 (351)
|||||+|+ .|.|||++.|+||++
T Consensus 292 GY~~i~r~~~n~CgI~~~~~~p~~ 315 (315)
T 2c0y_A 292 GYIRMARNKGNHCGIASFPSYPEI 315 (315)
T ss_dssp TEEEEECSSSSGGGTTTSCEEEEC
T ss_pred cEEEEEcCCCCccCcCceeEEeeC
Confidence 99999998 489999999999986
No 9
>1cs8_A Human procathepsin L; prosegment, propeptide, inhibition, hydrolase; HET: OCS; 1.80A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cjl_A 3hwn_A*
Probab=100.00 E-value=5.3e-61 Score=461.15 Aligned_cols=249 Identities=37% Similarity=0.734 Sum_probs=210.7
Q ss_pred ccceeecCeeccceeecccc-CcccceeEEEEEccCCCCCCcCcceeecC--C-CccccCCccCchhhhhhHHHHHHHHH
Q psy3960 97 IGEELVNGIILEKWRLVTSE-GEKVSKYSLWVRYNKASKDAIPVRYEMKG--Y-NSLLDQSVCGSCWSFGTTGAVEGAYY 172 (351)
Q Consensus 97 ~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~plP~~~d~r~--~-~~v~dQg~cGSCWAfA~~~alE~~~~ 172 (351)
++.+.|.|++.++|...... ......... .........+|.+||+|. . .+|+|||.||||||||++++||++++
T Consensus 58 ~g~N~F~Dlt~eEf~~~~~g~~~~~~~~~~--~~~~~~~~~lP~~~DwR~~g~vtpVkdQg~CGSCWAFsa~~alE~~~~ 135 (316)
T 1cs8_A 58 MAMNAFGDMTSEEFRQVMNGFQNRKPRKGK--VFQEPLFYEAPRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMF 135 (316)
T ss_dssp ECCCTTTTCCHHHHHHHHCCBCCCCCSCCE--ECCCCTTCCCCSCEEGGGGTCCCCCCBCCSSSCHHHHHHHHHHHHHHH
T ss_pred EccCccCCCCHHHHHHHhcCCCCCccccCc--cccCccccCCCCcEecCCCCCcCCCCcccCCccHHHHHHHHHHHHHHH
Confidence 58889999999888643321 100000000 111112335777777775 3 48899999999999999999999999
Q ss_pred HhcCCceecCHHHHhhhcCCCCCCCCCCCchHHHHHHHH-HcCCCCCCCCCCCCCCCCccccCCCCceeeEeeEEEecCC
Q psy3960 173 MKHKKLAVLSQQALIDCSWGYGNNGCDGGEDFRSYQWIM-KHGLPTQDDYGPYLGQDAYCHIANTTATATMTGFVNVTPN 251 (351)
Q Consensus 173 ~~~g~~~~LS~q~l~dc~~~~~~~gC~GG~~~~a~~~l~-~~Gi~~e~~y~PY~~~~~~C~~~~~~~~~~i~~y~~v~~~ 251 (351)
+++|+.+.||+|+|+||+..+++.||+||++..|++|+. +.|+++|++| ||.+.++.|+.......+++++|..|+.
T Consensus 136 i~~g~~~~LSeq~lvdC~~~~g~~gC~GG~~~~a~~yi~~~~Gi~~e~~y-PY~~~~~~C~~~~~~~~~~i~~~~~v~~- 213 (316)
T 1cs8_A 136 RKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDNGGLDSEESY-PYEATEESCKYNPKYSVANDAGFVDIPK- 213 (316)
T ss_dssp HHHSCCCCBCHHHHHHHCGGGTCCGGGCBCHHHHHHHHHHHTCEEBTTTS-CCCSSCCCCCCCGGGEEECCCCEEECCS-
T ss_pred HHcCCCcCcCHHHHHHhccccCCCCCCCCCHHHHHHHHHHhCCcCchhcc-CCCCCCCCcCCCCccceeEeccEEEeCC-
Confidence 999999999999999999655689999999999999997 6699999999 9999999999776667789999999987
Q ss_pred CHHHHHHHHHcCCCEEEEEEcCccccccccCcEEecCCCCCCCCCCCeEEEEEEEe---ee-CCeeEEEEEcCCCCCCCC
Q psy3960 252 SEDALKLALAKHGPVSVAIDASQKSFSFYVNGVYYDEKCNNSPDGLDHAVLAVGYG---EL-DGKPYWQVKNSWSTYWGN 327 (351)
Q Consensus 252 ~~~~ik~aL~~~GPV~v~i~~~~~~f~~y~~Giy~~~~~~~~~~~~~HaV~iVGyg---~~-~g~~ywivkNSWG~~WG~ 327 (351)
++++||++|+++|||+|+|++++++|++|++|||..+.|+.. .++|||+||||| ++ +|++|||||||||++||+
T Consensus 214 ~~~~ik~~l~~~GPV~v~i~~~~~~f~~Y~~Gvy~~~~c~~~--~~~HaV~iVGygd~~~~~~g~~yWivkNSWG~~WGe 291 (316)
T 1cs8_A 214 QEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSE--DMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGM 291 (316)
T ss_dssp CHHHHHHHHHHHCCEEEEECCCSHHHHTEEEEEECCTTCCSS--CCCEEEEEEEEEEECCSSCCEEEEEEECSBCTTSTB
T ss_pred CHHHHHHHHHhcCCEEEEEecCChhhccccCceECCCCCCCC--CCCEEEEEEEecCCcccCCCCcEEEEEcCCCCCccc
Confidence 899999999999999999999866899999999998878653 689999999999 66 789999999999999999
Q ss_pred CcEEEEEecC-CeeeecCCcEEeeC
Q psy3960 328 QGYVLMSIKD-NNCGVMTAPTYVTM 351 (351)
Q Consensus 328 ~GY~~Is~~~-n~cgi~~~~~~~~~ 351 (351)
+|||||+|+. |.|||++.++||++
T Consensus 292 ~GY~~i~r~~~n~CgI~~~~~~p~~ 316 (316)
T 1cs8_A 292 GGYVKMAKDRRNHCGIASAASYPTV 316 (316)
T ss_dssp TTEEEEECSSSSGGGTTTSCEEECC
T ss_pred CCEEEEECCCCCccCccceeeEeeC
Confidence 9999999986 88999999999986
No 10
>1by8_A Protein (procathepsin K); hydrolase(sulfhydryl proteinase), papain; 2.60A {Homo sapiens} SCOP: d.3.1.1 PDB: 7pck_A
Probab=100.00 E-value=3.8e-61 Score=461.81 Aligned_cols=250 Identities=38% Similarity=0.705 Sum_probs=209.7
Q ss_pred ccceeecCeeccceeeccccCcccc-eeEEEEEccCCCC-CCcCcceeecC--C-CccccCCccCchhhhhhHHHHHHHH
Q psy3960 97 IGEELVNGIILEKWRLVTSEGEKVS-KYSLWVRYNKASK-DAIPVRYEMKG--Y-NSLLDQSVCGSCWSFGTTGAVEGAY 171 (351)
Q Consensus 97 ~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~plP~~~d~r~--~-~~v~dQg~cGSCWAfA~~~alE~~~ 171 (351)
++.+.|.|++.++|...+....... ............. .++|.+||+|. . .+|+|||.||||||||++++||+++
T Consensus 58 ~g~N~FaDlt~eEf~~~~~g~~~~~~~~~~~~~~~~~~~~~~lP~~~DwR~~g~vtpVkdQg~CGSCWAFs~~~alE~~~ 137 (314)
T 1by8_A 58 LAMNHLGDMTSEEVVQKMTGLKVPLSHSRSNDTLYIPEWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQL 137 (314)
T ss_dssp ECCCTTSSSCHHHHHHHSCCCCCCSCCCCSSSSSBCCCCSSCCCSCCBSTTTTCSCCCCBCCSSSCHHHHHHHHHHHHHH
T ss_pred EcccccccCCHHHHHHHhccCCCCcccccCCccccccccccCCCCeEeCCCCCCCCCcccCCCCCCcHHHHHHHHHHHHH
Confidence 5788999999988854332111000 0000000111112 22677777775 3 4889999999999999999999999
Q ss_pred HHhcCCceecCHHHHhhhcCCCCCCCCCCCchHHHHHHHHH-cCCCCCCCCCCCCCCCCccccCCCCceeeEeeEEEecC
Q psy3960 172 YMKHKKLAVLSQQALIDCSWGYGNNGCDGGEDFRSYQWIMK-HGLPTQDDYGPYLGQDAYCHIANTTATATMTGFVNVTP 250 (351)
Q Consensus 172 ~~~~g~~~~LS~q~l~dc~~~~~~~gC~GG~~~~a~~~l~~-~Gi~~e~~y~PY~~~~~~C~~~~~~~~~~i~~y~~v~~ 250 (351)
++++|+.+.||+|+|+||+. ++.||+||++..|++|+.+ .||++|++| ||.+.++.|+.......++|++|..++.
T Consensus 138 ~i~~g~~~~LSeq~lvdC~~--~~~gC~GG~~~~a~~yi~~~~Gi~~e~~y-PY~~~~~~C~~~~~~~~~~i~~~~~v~~ 214 (314)
T 1by8_A 138 KKKTGKLLNLSPQNLVDCVS--ENDGCGGGYMTNAFQYVQKNRGIDSEDAY-PYVGQEESCMYNPTGKAAKCRGYREIPE 214 (314)
T ss_dssp HHHHSCCCCBCHHHHHTTCT--TSCGGGCCCSHHHHHHHHHTTCBCBTTTS-CCCSSCCCCCCCGGGCCBCCSCEEECCS
T ss_pred HHhcCCCcccCHHHHHHhcC--CCCCCcCCCHHHHHHHHHHcCCcCcHhhC-CCCCCCCCcCCCCccceeEECcEEEecC
Confidence 99999999999999999985 6899999999999999985 599999999 9999999998766666789999999988
Q ss_pred CCHHHHHHHHHcCCCEEEEEEcCccccccccCcEEecCCCCCCCCCCCeEEEEEEEeeeCCeeEEEEEcCCCCCCCCCcE
Q psy3960 251 NSEDALKLALAKHGPVSVAIDASQKSFSFYVNGVYYDEKCNNSPDGLDHAVLAVGYGELDGKPYWQVKNSWSTYWGNQGY 330 (351)
Q Consensus 251 ~~~~~ik~aL~~~GPV~v~i~~~~~~f~~y~~Giy~~~~~~~~~~~~~HaV~iVGyg~~~g~~ywivkNSWG~~WG~~GY 330 (351)
.++++||++|+++|||+|+|++++++|++|++|||..+.|+.. .++|||+|||||+++|++|||||||||++||++||
T Consensus 215 ~~~~~i~~al~~~GPV~v~i~~~~~~f~~Y~~Gvy~~~~c~~~--~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~GY 292 (314)
T 1by8_A 215 GNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSD--NLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGY 292 (314)
T ss_dssp SCHHHHHHHHHHHCCEEEEECCCSHHHHTEEEECBCCTTCCSS--CCCEEEEEEEEEEETTEEEEEEECSBTTTSTBTTE
T ss_pred CCHHHHHHHHHHcCCEEEEEEeChHHhhhccCceecCCCCCCC--CCCeEEEEEEEeccCCceEEEEEcCCCCCcCcCCE
Confidence 8999999999999999999999867999999999998888653 68999999999999999999999999999999999
Q ss_pred EEEEec-CCeeeecCCcEEeeC
Q psy3960 331 VLMSIK-DNNCGVMTAPTYVTM 351 (351)
Q Consensus 331 ~~Is~~-~n~cgi~~~~~~~~~ 351 (351)
|||+|+ .|.|||++.++||++
T Consensus 293 ~~i~r~~~n~CgI~~~~~~p~~ 314 (314)
T 1by8_A 293 ILMARNKNNACGIANLASFPKM 314 (314)
T ss_dssp EEECCSSSCGGGTTSSCEEECC
T ss_pred EEEEcCCCCcCCccCeeEEeeC
Confidence 999998 489999999999986
No 11
>3f5v_A DER P 1 allergen; allergy, asthma, DUST mites, glycoprotein, hydrola protease, secreted, thiol protease; HET: P6G; 1.36A {Dermatophagoides pteronyssinus} PDB: 2as8_A 3rvw_A* 3rvx_A 3rvv_A* 3d6s_A*
Probab=100.00 E-value=4.1e-60 Score=433.70 Aligned_cols=209 Identities=26% Similarity=0.529 Sum_probs=191.5
Q ss_pred CcCcceeecC--C-CccccCCccCchhhhhhHHHHHHHHHHhcCCceecCHHHHhhhcCCCCCCCCCCCchHHHHHHHHH
Q psy3960 136 AIPVRYEMKG--Y-NSLLDQSVCGSCWSFGTTGAVEGAYYMKHKKLAVLSQQALIDCSWGYGNNGCDGGEDFRSYQWIMK 212 (351)
Q Consensus 136 plP~~~d~r~--~-~~v~dQg~cGSCWAfA~~~alE~~~~~~~g~~~~LS~q~l~dc~~~~~~~gC~GG~~~~a~~~l~~ 212 (351)
.+|.+||+|. + .+|+||+.||||||||++++||+++++++++.++||+|+|+||+. +.||+||++..|++|+++
T Consensus 9 ~lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~lE~~~~~~~~~~~~lS~q~l~dc~~---~~gC~GG~~~~a~~~~~~ 85 (222)
T 3f5v_A 9 NAPAEIDLRQMRTVTPIRMQGGCGSAWAFSGVAATESAYLAYRQQSLDLAEQELVDCAS---QHGCHGDTIPRGIEYIQH 85 (222)
T ss_dssp CCCSCEEHHHHTCSCCCCBCCSSBCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHTC---SSTTBCCCHHHHHHHHHH
T ss_pred CCCCCCCCccCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHhCcC---CCCCCCCCHHHHHHHHHH
Confidence 4677777774 3 488999999999999999999999999999999999999999995 789999999999999999
Q ss_pred cCCCCCCCCCCCCCCCCccccCCCCceeeEeeEEEecCCCHHHHHHHHHc-CCCEEEEEEcC-ccccccccCcEEecCCC
Q psy3960 213 HGLPTQDDYGPYLGQDAYCHIANTTATATMTGFVNVTPNSEDALKLALAK-HGPVSVAIDAS-QKSFSFYVNGVYYDEKC 290 (351)
Q Consensus 213 ~Gi~~e~~y~PY~~~~~~C~~~~~~~~~~i~~y~~v~~~~~~~ik~aL~~-~GPV~v~i~~~-~~~f~~y~~Giy~~~~~ 290 (351)
+|+++|++| ||.+.++.|+ ......+++++|..++..++++||++|++ +|||+++|.+. .++|++|++|+++...|
T Consensus 86 ~Gi~~e~~y-PY~~~~~~C~-~~~~~~~~i~~~~~v~~~~~~~ik~~l~~~~gpV~v~~~~~~~~~f~~Y~~gi~~~~~~ 163 (222)
T 3f5v_A 86 NGVVQESYY-RYVAREQSCR-RPNAQRFGISNYCQIYPPNANKIREALAQTHSAIAVIIGIKDLDAFRHYDGRTIIQRDN 163 (222)
T ss_dssp HCEEBGGGS-CCCSSCCCCC-CCSSCEECCSEEEECCSCCHHHHHHHHHHHCCCEEEEEEESCHHHHHTCCSSSCBCCCC
T ss_pred cCCCchhhC-CCcccCCCcc-CCcCcceeeccEEEeCCCCHHHHHHHHHhcCCCEEEEEEeccchhhhccCCCceecCCC
Confidence 999999999 9999999999 55677899999999988899999999999 99999999984 26899999999877666
Q ss_pred CCCCCCCCeEEEEEEEeeeCCeeEEEEEcCCCCCCCCCcEEEEEecCCeeeecCCcEEeeC
Q psy3960 291 NNSPDGLDHAVLAVGYGELDGKPYWQVKNSWSTYWGNQGYVLMSIKDNNCGVMTAPTYVTM 351 (351)
Q Consensus 291 ~~~~~~~~HaV~iVGyg~~~g~~ywivkNSWG~~WG~~GY~~Is~~~n~cgi~~~~~~~~~ 351 (351)
.. ..++|||+|||||+++|++|||||||||++||++|||||+|++|.|||+++++||+|
T Consensus 164 ~~--~~~~HaV~iVGyg~~~g~~ywivkNSWG~~WGe~Gy~~i~r~~n~cgi~~~~~~p~~ 222 (222)
T 3f5v_A 164 GY--QPNYHAVNIVGYSNAQGVDYWIVRNSWDTNWGDNGYGYFAANIDLMMIEEYPYVVIL 222 (222)
T ss_dssp SS--SCEEEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSSCGGGTTTSCEEEEC
T ss_pred CC--CccCcEEEEEEEeccCCCEEEEEEcCCCCCcccCCEEEEEcCCCeecCCCceeEEeC
Confidence 43 368999999999999999999999999999999999999999999999999999986
No 12
>1ppo_A Protease omega; hydrolase(thiol protease); 1.80A {Carica papaya} SCOP: d.3.1.1 PDB: 1meg_A*
Probab=100.00 E-value=2.3e-59 Score=427.25 Aligned_cols=207 Identities=34% Similarity=0.710 Sum_probs=188.1
Q ss_pred cCcceeecC--C-CccccCCccCchhhhhhHHHHHHHHHHhcCCceecCHHHHhhhcCCCCCCCCCCCchHHHHHHHHHc
Q psy3960 137 IPVRYEMKG--Y-NSLLDQSVCGSCWSFGTTGAVEGAYYMKHKKLAVLSQQALIDCSWGYGNNGCDGGEDFRSYQWIMKH 213 (351)
Q Consensus 137 lP~~~d~r~--~-~~v~dQg~cGSCWAfA~~~alE~~~~~~~g~~~~LS~q~l~dc~~~~~~~gC~GG~~~~a~~~l~~~ 213 (351)
+|.+||+|. . .+|+||+.||||||||++++||+++++++++.++||+|+|+||+. .+.||+||++..|++|++++
T Consensus 1 lP~~~DwR~~~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~--~~~gC~GG~~~~a~~yi~~~ 78 (216)
T 1ppo_A 1 LPENVDWRKKGAVTPVRHQGSCGSCWAFSAVATVEGINKIRTGKLVELSEQELVDCER--RSHGCKGGYPPYALEYVAKN 78 (216)
T ss_dssp CCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCS--SSCTTBCCCHHHHHHHHHHH
T ss_pred CCCcCcCCCCCCCCCCccCCcCccHHHHHHHHHHHHHHHHccCCceecCHHHHHhccC--CCCCCCCCCHHHHHHHHHHh
Confidence 466667665 3 488999999999999999999999999999999999999999985 57899999999999999999
Q ss_pred CCCCCCCCCCCCCCCCccccCCC-CceeeEeeEEEecCCCHHHHHHHHHcCCCEEEEEEcCccccccccCcEEecCCCCC
Q psy3960 214 GLPTQDDYGPYLGQDAYCHIANT-TATATMTGFVNVTPNSEDALKLALAKHGPVSVAIDASQKSFSFYVNGVYYDEKCNN 292 (351)
Q Consensus 214 Gi~~e~~y~PY~~~~~~C~~~~~-~~~~~i~~y~~v~~~~~~~ik~aL~~~GPV~v~i~~~~~~f~~y~~Giy~~~~~~~ 292 (351)
|+++|++| ||.+.++.|+.... ...+++.+|..++..++++||++|++ |||+++|++++++|++|++|||.. +|..
T Consensus 79 Gi~~e~~y-PY~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~-GPV~v~~~~~~~~f~~Y~~Giy~~-~~~~ 155 (216)
T 1ppo_A 79 GIHLRSKY-PYKAKQGTCRAKQVGGPIVKTSGVGRVQPNNEGNLLNAIAK-QPVSVVVESKGRPFQLYKGGIFEG-PCGT 155 (216)
T ss_dssp CBCBTTTS-CCCSSCCCCCGGGCCSCCBCCCEEEECCSSCHHHHHHHHHH-SCEEEEECCCSHHHHHCCSSEECC-SCCS
T ss_pred CcCccccC-CccCCCCCcCCCCCCCceEEeccEEEECCCCHHHHHHHHHh-CCEEEEEecCChhhhhcCCceECC-CCCC
Confidence 99999999 99999999987643 56789999999988889999999998 999999999757999999999975 5754
Q ss_pred CCCCCCeEEEEEEEeeeCCeeEEEEEcCCCCCCCCCcEEEEEecC----CeeeecCCcEEeeC
Q psy3960 293 SPDGLDHAVLAVGYGELDGKPYWQVKNSWSTYWGNQGYVLMSIKD----NNCGVMTAPTYVTM 351 (351)
Q Consensus 293 ~~~~~~HaV~iVGyg~~~g~~ywivkNSWG~~WG~~GY~~Is~~~----n~cgi~~~~~~~~~ 351 (351)
.++|||+|||||+++|++|||||||||++||++|||||+|+. |.|||+++++||++
T Consensus 156 ---~~~HaV~iVGyg~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~n~Cgi~~~~~~p~~ 215 (216)
T 1ppo_A 156 ---KVDHAVTAVGYGKSGGKGYILIKNSWGTAWGEKGYIRIKRAPGNSPGVCGLYKSSYYPTK 215 (216)
T ss_dssp ---CCCEEEEEEEEEEETTEEEEEEECSBCSSSTBTTEEEEECCCSSSSCGGGTTSCCEEEEC
T ss_pred ---CCCEEEEEEEeeccCCccEEEEEeCCCCCcccCcEEEEEcCCCCCCCcCccccceeeEee
Confidence 479999999999999999999999999999999999999984 89999999999986
No 13
>1cqd_A Protein (protease II); cysteine protease, glycoprotein, proline specificity, carboh papain family, hydrolase; HET: NAG FUL FUC; 2.10A {Zingiber officinale} SCOP: d.3.1.1
Probab=100.00 E-value=2.8e-59 Score=428.02 Aligned_cols=207 Identities=35% Similarity=0.753 Sum_probs=189.6
Q ss_pred cCcceeecC---CCccccCCccCchhhhhhHHHHHHHHHHhcCCceecCHHHHhhhcCCCCCCCCCCCchHHHHHHHHHc
Q psy3960 137 IPVRYEMKG---YNSLLDQSVCGSCWSFGTTGAVEGAYYMKHKKLAVLSQQALIDCSWGYGNNGCDGGEDFRSYQWIMKH 213 (351)
Q Consensus 137 lP~~~d~r~---~~~v~dQg~cGSCWAfA~~~alE~~~~~~~g~~~~LS~q~l~dc~~~~~~~gC~GG~~~~a~~~l~~~ 213 (351)
+|.+||+|. ..+|+||+.||||||||++++||+++++++++.++||+|+|+||+.. +.||+||++..||+|++++
T Consensus 3 lP~~~DwR~~~~v~~VkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~--~~gC~GG~~~~a~~y~~~~ 80 (221)
T 1cqd_A 3 LPDSIDWRENGAVVPVKNQGGCGSCWAFSTVAAVEGINQIVTGDLISLSEQQLVDCTTA--NHGCRGGWMNPAFQFIVNN 80 (221)
T ss_dssp CCSCEETTTTTCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTT--SCTTBCCCHHHHHHHHHHH
T ss_pred CCCcCcCCCCCCcCCcccCCCCccHHHHHHHHHHHHHHHHhcCCeeeeccceeEECCCC--CCCCCCCCHHHHHHHHHHh
Confidence 677777776 34889999999999999999999999999999999999999999853 7899999999999999998
Q ss_pred -CCCCCCCCCCCCCCCCccccCCCCceeeEeeEEEecCCCHHHHHHHHHcCCCEEEEEEcCccccccccCcEEecCCCCC
Q psy3960 214 -GLPTQDDYGPYLGQDAYCHIANTTATATMTGFVNVTPNSEDALKLALAKHGPVSVAIDASQKSFSFYVNGVYYDEKCNN 292 (351)
Q Consensus 214 -Gi~~e~~y~PY~~~~~~C~~~~~~~~~~i~~y~~v~~~~~~~ik~aL~~~GPV~v~i~~~~~~f~~y~~Giy~~~~~~~ 292 (351)
|+++|++| ||.+.++.|+.......+++++|..++..++++||++|++ |||+++|++..++|++|++|||.. .|..
T Consensus 81 ~Gi~~e~~y-PY~~~~~~C~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~-GPV~v~i~~~~~~f~~Y~~Giy~~-~~~~ 157 (221)
T 1cqd_A 81 GGINSEETY-PYRGQDGICNSTVNAPVVSIDSYENVPSHNEQSLQKAVAN-QPVSVTMDAAGRDFQLYRSGIFTG-SCNI 157 (221)
T ss_dssp TSBCBTTTS-CCCSSCCCCCSSSCCCSBCCSEEEECCSSCHHHHHHHHTT-SCEEEEECCCSHHHHTCCSSEECC-CCCC
T ss_pred CCccccccC-CccCCCCCcCCCCCCceEEeccEEEeCCchHHHHHHHHHh-CCEEEEEeccCcccccccCccccC-CCCC
Confidence 99999999 9999999998776677789999999988889999999986 999999999867899999999976 5754
Q ss_pred CCCCCCeEEEEEEEeeeCCeeEEEEEcCCCCCCCCCcEEEEEec----CCeeeecCCcEEeeC
Q psy3960 293 SPDGLDHAVLAVGYGELDGKPYWQVKNSWSTYWGNQGYVLMSIK----DNNCGVMTAPTYVTM 351 (351)
Q Consensus 293 ~~~~~~HaV~iVGyg~~~g~~ywivkNSWG~~WG~~GY~~Is~~----~n~cgi~~~~~~~~~ 351 (351)
.++|||+|||||+++|++|||||||||++||++|||||+|+ .|.|||+++++||++
T Consensus 158 ---~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~~~~~p~~ 217 (221)
T 1cqd_A 158 ---SANHALTVVGYGTENDKDFWIVKNSWGKNWGESGYIRAERNIENPDGKCGITRFASYPVK 217 (221)
T ss_dssp ---CCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSCSSTTCGGGTTSSCEEEEC
T ss_pred ---cCCeEEEEEEEcccCCCcEEEEEeCCCCCcccCCEEEEEcCCCCCCcccceeeeeeEEEe
Confidence 58999999999999999999999999999999999999997 488999999999985
No 14
>3f75_A Toxopain-2, cathepsin L protease; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} SCOP: d.3.1.0
Probab=100.00 E-value=1.2e-59 Score=430.88 Aligned_cols=210 Identities=42% Similarity=0.833 Sum_probs=192.8
Q ss_pred CcCcceeecC--C-CccccCCccCchhhhhhHHHHHHHHHHhcCCceecCHHHHhhhcCCCCCCCCCCCchHHHHHHHHH
Q psy3960 136 AIPVRYEMKG--Y-NSLLDQSVCGSCWSFGTTGAVEGAYYMKHKKLAVLSQQALIDCSWGYGNNGCDGGEDFRSYQWIMK 212 (351)
Q Consensus 136 plP~~~d~r~--~-~~v~dQg~cGSCWAfA~~~alE~~~~~~~g~~~~LS~q~l~dc~~~~~~~gC~GG~~~~a~~~l~~ 212 (351)
.+|.+||+|. + .+|+||+.||||||||++++||+++++++++.++||+|+|++|+...++.||+||.+..|++|+.+
T Consensus 6 ~lP~~~Dwr~~~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~~c~~~~~~~gC~GG~~~~a~~~~~~ 85 (224)
T 3f75_A 6 ELPAGVDWRSRGCVTPVKDQRDCGSCWAFSTTGALEGAHCAKTGKLVSLSEQELMDCSRAEGNQSCSGGEMNDAFQYVLD 85 (224)
T ss_dssp GSCSCEEHHHHTCCCCCCBCCSSSCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCGGGTCCGGGCBCHHHHHHHHHH
T ss_pred CCCCceecccCCCCCCCccCCCCccHHHHHHHHHHHHHHHHhcCCCceeCHHHHhhcccCCCCCCCCCCCHHHHHHHHHH
Confidence 4677777774 3 488999999999999999999999999999999999999999997556899999999999999998
Q ss_pred -cCCCCCCCCCCCCCCCCccccCCCCceeeEeeEEEecCCCHHHHHHHHHcCCCEEEEEEcCccccccccCcEEecCCCC
Q psy3960 213 -HGLPTQDDYGPYLGQDAYCHIANTTATATMTGFVNVTPNSEDALKLALAKHGPVSVAIDASQKSFSFYVNGVYYDEKCN 291 (351)
Q Consensus 213 -~Gi~~e~~y~PY~~~~~~C~~~~~~~~~~i~~y~~v~~~~~~~ik~aL~~~GPV~v~i~~~~~~f~~y~~Giy~~~~~~ 291 (351)
+|+++|++| ||.+.++.|+.......+++.+|..++..++++||++|+ +|||+++|++..++|++|++|||. +.|.
T Consensus 86 ~~Gi~~e~~y-PY~~~~~~C~~~~~~~~~~i~~~~~~~~~~~~~l~~~l~-~gPV~v~i~~~~~~f~~y~~Giy~-~~~~ 162 (224)
T 3f75_A 86 SGGICSEDAY-PYLARDEECRAQSCEKVVKILGFKDVPRRSEAAMKAALA-KSPVSIAIEADQMPFQFYHEGVFD-ASCG 162 (224)
T ss_dssp HTCBCBTTTS-CCCSSCCCCCGGGSCCCBCCSEEEECCSSCHHHHHHHHH-HSCEEEEECCCSHHHHTEEEEEEC-CCCC
T ss_pred hCCccccccC-CCcCCCCCCCcCCCCceEEeccEEEeCCChHHHHHHHHc-CCCEEEEEeccchhhhcCccceEC-CCCC
Confidence 699999999 999999999987777778899999998889999999999 899999999985689999999997 6674
Q ss_pred CCCCCCCeEEEEEEEeee--CCeeEEEEEcCCCCCCCCCcEEEEEecC---CeeeecCCcEEeeC
Q psy3960 292 NSPDGLDHAVLAVGYGEL--DGKPYWQVKNSWSTYWGNQGYVLMSIKD---NNCGVMTAPTYVTM 351 (351)
Q Consensus 292 ~~~~~~~HaV~iVGyg~~--~g~~ywivkNSWG~~WG~~GY~~Is~~~---n~cgi~~~~~~~~~ 351 (351)
. .++|||+|||||++ ++++|||||||||++||++|||||+|+. |.|||+++++||+|
T Consensus 163 ~---~~~Hav~iVGyg~~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~cgi~~~~~~p~~ 224 (224)
T 3f75_A 163 T---DLDHGVLLVGYGTDKESKKDFWIMKNSWGTGWGRDGYMYMAMHKGEEGQCGLLLDASFPVM 224 (224)
T ss_dssp C---CCCEEEEEEEEEEETTTTEEEEEEECSBCTTSTBTTEEEEESCSCTTCGGGTTSSCEEEEC
T ss_pred C---ccCeEEEEEEEecccCCCCCEEEEECCcCcchhhCCEEEEEcCCCCCCcCcccCceeeeeC
Confidence 3 68999999999998 8999999999999999999999999987 99999999999986
No 15
>1pci_A Procaricain; zymogen, hydrolase, thiol protease; 3.20A {Carica papaya} SCOP: d.3.1.1
Probab=100.00 E-value=9.2e-60 Score=453.50 Aligned_cols=248 Identities=29% Similarity=0.588 Sum_probs=207.9
Q ss_pred ccccccceeecCeeccceeeccccCc--ccc--eeEEEEEccCCCCCCcCcceeecCC---CccccCCccCchhhhhhHH
Q psy3960 93 NWTYIGEELVNGIILEKWRLVTSEGE--KVS--KYSLWVRYNKASKDAIPVRYEMKGY---NSLLDQSVCGSCWSFGTTG 165 (351)
Q Consensus 93 ~~~~~~~~~~~g~~~~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~plP~~~d~r~~---~~v~dQg~cGSCWAfA~~~ 165 (351)
.|+ ++.+.|.|++.++|...+.... ... .... .........+|.+||+|.. .+|+|||.||||||||+++
T Consensus 62 ~~~-~g~N~FaDlt~eEf~~~~~g~~~~~~~~~~~~~--~~~~~~~~~lP~~~DwR~~g~vt~VkdQg~CGSCWAFaa~~ 138 (322)
T 1pci_A 62 SYW-LGLNEFADLSNDEFNEKYVGSLIDATIEQSYDE--EFINEDIVNLPENVDWRKKGAVTPVRHQGSCGSCWAFSAVA 138 (322)
T ss_dssp SEE-ECSCTTTTSCHHHHHHHHCCCBCCCSSCCCCSE--ECCCCCCCCSCSCEETTTTTCCCCCCBCTTSCCHHHHHHHH
T ss_pred ceE-EecCccccCCHHHHHHHhcCCCCcccccccccc--ccccccccCCCCeEecccCCCCCCccccccCCccHHHHHHH
Confidence 344 4788899998888765432110 000 0000 0111122357878887753 4889999999999999999
Q ss_pred HHHHHHHHhcCCceecCHHHHhhhcCCCCCCCCCCCchHHHHHHHHHcCCCCCCCCCCCCCCCCccccCCC-CceeeEee
Q psy3960 166 AVEGAYYMKHKKLAVLSQQALIDCSWGYGNNGCDGGEDFRSYQWIMKHGLPTQDDYGPYLGQDAYCHIANT-TATATMTG 244 (351)
Q Consensus 166 alE~~~~~~~g~~~~LS~q~l~dc~~~~~~~gC~GG~~~~a~~~l~~~Gi~~e~~y~PY~~~~~~C~~~~~-~~~~~i~~ 244 (351)
+||+++++++|+.+.||+|+|+||+. .+.||+||++..|++|+.++||++|++| ||.+.++.|+.... ...++|.+
T Consensus 139 alE~~~~i~~g~~~~lSeq~lvdC~~--~~~gC~GG~~~~a~~yi~~~Gi~~e~~y-PY~~~~~~C~~~~~~~~~~~i~~ 215 (322)
T 1pci_A 139 TVEGINKIRTGKLVELSEQELVDCER--RSHGCKGGYPPYALEYVAKNGIHLRSKY-PYKAKQGTCRAKQVGGPIVKTSG 215 (322)
T ss_dssp HHHHHHHHHHSCCCCBCHHHHHHSCT--TSCGGGCBCHHHHHHHHHHHCBCBTTTS-CCCSSCCCCTTTTCCSCCBCCCC
T ss_pred HHHHHHHHHcCCccccCHHHHHhhcC--CCCCCCCCCHHHHHHHHHHhCCCchhhC-CCCCCCCCCCCCCCCCceEEEee
Confidence 99999999999999999999999985 6889999999999999999999999999 99999999987643 45688999
Q ss_pred EEEecCCCHHHHHHHHHcCCCEEEEEEcCccccccccCcEEecCCCCCCCCCCCeEEEEEEEeeeCCeeEEEEEcCCCCC
Q psy3960 245 FVNVTPNSEDALKLALAKHGPVSVAIDASQKSFSFYVNGVYYDEKCNNSPDGLDHAVLAVGYGELDGKPYWQVKNSWSTY 324 (351)
Q Consensus 245 y~~v~~~~~~~ik~aL~~~GPV~v~i~~~~~~f~~y~~Giy~~~~~~~~~~~~~HaV~iVGyg~~~g~~ywivkNSWG~~ 324 (351)
|..|+..++++||++|++ |||+|+|++++++|++|++|||.. .|+. .++|||+|||||+++|++|||||||||++
T Consensus 216 ~~~v~~~~e~~l~~~l~~-GPV~v~i~~~~~~f~~Y~~Gvy~~-~c~~---~~~HaV~iVGyg~~~g~~yWivkNSWG~~ 290 (322)
T 1pci_A 216 VGRVQPNNEGNLLNAIAK-QPVSVVVESKGRPFQLYKGGIFEG-PCGT---KVDGAVTAVGYGKSGGKGYILIKNSWGTA 290 (322)
T ss_dssp EEECCSSBHHHHHHHHHH-SCEEEEECTTCHHHHTEEEEEECC-SCCS---CCCEEEEEEEEEEETTEEEEEEECSBCSS
T ss_pred EEEeCCCcHHHHHHHHHH-CCEEEEEecccccccccCCeEeCC-CCCC---CCCEEEEEEEEeccCCccEEEEEeCCCCc
Confidence 999988889999999998 999999999767999999999965 5754 47999999999999999999999999999
Q ss_pred CCCCcEEEEEecC----CeeeecCCcEEeeC
Q psy3960 325 WGNQGYVLMSIKD----NNCGVMTAPTYVTM 351 (351)
Q Consensus 325 WG~~GY~~Is~~~----n~cgi~~~~~~~~~ 351 (351)
||++|||||+|+. |.|||+++++||++
T Consensus 291 WGe~GY~~i~r~~~~~~n~CgI~~~~~yp~~ 321 (322)
T 1pci_A 291 WGEKGYIRIKRAPGNSPGVCGLYKSSYYPTK 321 (322)
T ss_dssp STBTTEEEEECCCSBSSCGGGGGGCCEEECC
T ss_pred ccCCeEEEEEcCCCCCCCcCCcccceeEEEe
Confidence 9999999999985 89999999999985
No 16
>1m6d_A Cathepsin F, catsf; papain family cysteine protease, hydrolase; HET: MYP; 1.70A {Homo sapiens} SCOP: d.3.1.1
Probab=100.00 E-value=2.1e-59 Score=426.78 Aligned_cols=207 Identities=37% Similarity=0.729 Sum_probs=186.7
Q ss_pred cCcceeecC--C-CccccCCccCchhhhhhHHHHHHHHHHhcCCceecCHHHHhhhcCCCCCCCCCCCchHHHHHHHHHc
Q psy3960 137 IPVRYEMKG--Y-NSLLDQSVCGSCWSFGTTGAVEGAYYMKHKKLAVLSQQALIDCSWGYGNNGCDGGEDFRSYQWIMKH 213 (351)
Q Consensus 137 lP~~~d~r~--~-~~v~dQg~cGSCWAfA~~~alE~~~~~~~g~~~~LS~q~l~dc~~~~~~~gC~GG~~~~a~~~l~~~ 213 (351)
+|.+||+|. . .+|+||+.||||||||++++||+++++++++.++||+|+|+||.. .+.||+||++..|++|++++
T Consensus 1 lP~~~DwR~~~~vt~VkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~--~~~gC~GG~~~~a~~~i~~~ 78 (214)
T 1m6d_A 1 APPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDK--MDKACMGGLPSNAYSAIKNL 78 (214)
T ss_dssp CCSCEEGGGGTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCS--SSCTTBCCCHHHHHHHHHHH
T ss_pred CCCcCcCCCCCCCCCCccCCCCchHHHHHHHHHHHHHHHHHcCCCcccCHHHHHHhcC--CCCCCCCCCHHHHHHHHHHh
Confidence 456666664 3 488999999999999999999999999999999999999999984 46899999999999999987
Q ss_pred -CCCCCCCCCCCCCCCCccccCCCCceeeEeeEEEecCCCHHHHHHHHHcCCCEEEEEEcCccccccccCcEEecC--CC
Q psy3960 214 -GLPTQDDYGPYLGQDAYCHIANTTATATMTGFVNVTPNSEDALKLALAKHGPVSVAIDASQKSFSFYVNGVYYDE--KC 290 (351)
Q Consensus 214 -Gi~~e~~y~PY~~~~~~C~~~~~~~~~~i~~y~~v~~~~~~~ik~aL~~~GPV~v~i~~~~~~f~~y~~Giy~~~--~~ 290 (351)
|+++|++| ||.+.++.|+.......+++.++..++. ++++||++|+++|||+++|++. .|++|++|||..+ .|
T Consensus 79 ~Gi~~e~~y-PY~~~~~~C~~~~~~~~~~i~~~~~i~~-~~~~ik~~l~~~GPV~v~i~~~--~f~~Y~~Giy~~~~~~c 154 (214)
T 1m6d_A 79 GGLETEDDY-SYQGHMQSCQFSAEKAKVYIQDSVELSQ-NEQKLAAWLAKRGPISVAINAF--GMQFYRHGISRPLRPLC 154 (214)
T ss_dssp TCBCBTTTS-CCCSSCCCCCCCGGGCCBCCSEEEECCS-CHHHHHHHHHHHCCEEEEECTH--HHHHCCSSEECCCGGGS
T ss_pred cCcccccCc-CcCCCCCcCCCCcccceEEecCEEEeCh-HHHHHHHHHHhCCCEEEEEEec--hhhhcCCceecCCCCcC
Confidence 89999999 9999999998766666788999998865 8999999999999999999997 5999999999763 36
Q ss_pred CCCCCCCCeEEEEEEEeeeCCeeEEEEEcCCCCCCCCCcEEEEEecCCeeeecCCcEEeeC
Q psy3960 291 NNSPDGLDHAVLAVGYGELDGKPYWQVKNSWSTYWGNQGYVLMSIKDNNCGVMTAPTYVTM 351 (351)
Q Consensus 291 ~~~~~~~~HaV~iVGyg~~~g~~ywivkNSWG~~WG~~GY~~Is~~~n~cgi~~~~~~~~~ 351 (351)
... .++|||+|||||+++|++|||||||||++||++|||||+|+.|.|||++.++||++
T Consensus 155 ~~~--~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~n~Cgi~~~~~~~~~ 213 (214)
T 1m6d_A 155 SPW--LIDHAVLLVGYGQRSDVPFWAIKNSWGTDWGEKGYYYLHRGSGACGVNTMASSAVV 213 (214)
T ss_dssp CTT--CCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEESSSCGGGTTTTCEEEEC
T ss_pred CCC--cCCEEEEEEEEeecCCcEEEEEEeCCCCCcccCcEEEEEcCCCccccCceeEEEEe
Confidence 542 68999999999999999999999999999999999999999999999999999985
No 17
>3p5u_A Actinidin; SAD, cysteine proteinases, hydrolase; 1.50A {Actinidia arguta} SCOP: d.3.1.1 PDB: 3p5v_A 3p5w_A 3p5x_A 1aec_A* 2act_A
Probab=100.00 E-value=2.8e-59 Score=427.64 Aligned_cols=209 Identities=35% Similarity=0.703 Sum_probs=188.4
Q ss_pred cCcceeecC--C-CccccCCccCchhhhhhHHHHHHHHHHhcCCceecCHHHHhhhcCCCCCCCCCCCchHHHHHHHHHc
Q psy3960 137 IPVRYEMKG--Y-NSLLDQSVCGSCWSFGTTGAVEGAYYMKHKKLAVLSQQALIDCSWGYGNNGCDGGEDFRSYQWIMKH 213 (351)
Q Consensus 137 lP~~~d~r~--~-~~v~dQg~cGSCWAfA~~~alE~~~~~~~g~~~~LS~q~l~dc~~~~~~~gC~GG~~~~a~~~l~~~ 213 (351)
+|.+||+|. . .+|+||+.||||||||++++||+++++++++.++||+|+|+||+...++.||+||++..|++|+.++
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~lE~~~~i~~~~~~~LS~q~l~dC~~~~~~~gC~GG~~~~a~~~~~~~ 80 (220)
T 3p5u_A 1 LPDYVDWRSSGAVVDIKDQGQCGSAWAFSTIAAVEGINKIATGDLISLSEQELVDCGRTQNTRGCDGGFMTDGFQFIINN 80 (220)
T ss_dssp CCSCEETTTTTCSCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCCCSSCCTTBCCCHHHHHHHHHHH
T ss_pred CCCCCcCCcCCCCCCCCcCCCChhHHHHHHHHHHHHHHHHHcCCCCCcCHhHcEECCCCCCCCCCCCCCHHHHHHHHHHh
Confidence 466677775 3 4889999999999999999999999999999999999999999976568999999999999999988
Q ss_pred -CCCCCCCCCCCCCCCCccccCCC-CceeeEeeEEEecCCCHHHHHHHHHcCCCEEEEEEcCccccccccCcEEecCCCC
Q psy3960 214 -GLPTQDDYGPYLGQDAYCHIANT-TATATMTGFVNVTPNSEDALKLALAKHGPVSVAIDASQKSFSFYVNGVYYDEKCN 291 (351)
Q Consensus 214 -Gi~~e~~y~PY~~~~~~C~~~~~-~~~~~i~~y~~v~~~~~~~ik~aL~~~GPV~v~i~~~~~~f~~y~~Giy~~~~~~ 291 (351)
|+++|++| ||.+.++.|+.... ...+++.+|..++..++++||++| .+|||+++|++..++|++|++|||.. .|.
T Consensus 81 ~Gi~~e~~y-PY~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~l~~~l-~~GPV~v~~~~~~~~f~~Y~~Giy~~-~~~ 157 (220)
T 3p5u_A 81 GGINTEANY-PYTAEEGQCNLDLQQEKYVSIDTYENVPYNNEWALQTAV-AYQPVSVALEAAGYNFQHYSSGIFTG-PCG 157 (220)
T ss_dssp TCBCBTTTS-CCCSSCCCCCHHHHTCCSBCCCEEEECCTTCHHHHHHHH-TTSCEEEEECCCSHHHHTCCSSEECC-CCC
T ss_pred CCcCccccc-ccccCCCCcCcCCCCCceEEEccEEEeCCCcHHHHHHHH-hcCCEEEEEecCchhhccccCceECC-CCC
Confidence 89999999 99999999986433 345789999999888999999999 67999999999767899999999965 565
Q ss_pred CCCCCCCeEEEEEEEeeeCCeeEEEEEcCCCCCCCCCcEEEEEecCC---eeeecCCcEEeeC
Q psy3960 292 NSPDGLDHAVLAVGYGELDGKPYWQVKNSWSTYWGNQGYVLMSIKDN---NCGVMTAPTYVTM 351 (351)
Q Consensus 292 ~~~~~~~HaV~iVGyg~~~g~~ywivkNSWG~~WG~~GY~~Is~~~n---~cgi~~~~~~~~~ 351 (351)
. .++|||+|||||+++|++|||||||||++||++|||||+|+.| .|||++.++||++
T Consensus 158 ~---~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~Cgi~~~~~~p~~ 217 (220)
T 3p5u_A 158 T---AVDHAVTIVGYGTEGGIDYWIVKNSWGTTWGEEGYMRIQRNVGGVGQCGIAKKASYPVK 217 (220)
T ss_dssp C---SCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECCCCTTCGGGTTSSCEEEEC
T ss_pred C---ccceEEEEEEEecCCCceEEEEECCCCCCcccCCEEEEECCCCCCCccCcccccceEEE
Confidence 4 4799999999999999999999999999999999999999877 8999999999985
No 18
>1iwd_A Ervatamin B; cysteine protease, alpha-beta protein, catalytic DYAD, L-DOM domain., hydrolase; 1.63A {Tabernaemontana divaricata} SCOP: d.3.1.1
Probab=100.00 E-value=6.7e-59 Score=423.87 Aligned_cols=206 Identities=38% Similarity=0.777 Sum_probs=186.6
Q ss_pred cCcceeecC--C-CccccCCccCchhhhhhHHHHHHHHHHhcCCceecCHHHHhhhcCCCCCCCCCCCchHHHHHHHHHc
Q psy3960 137 IPVRYEMKG--Y-NSLLDQSVCGSCWSFGTTGAVEGAYYMKHKKLAVLSQQALIDCSWGYGNNGCDGGEDFRSYQWIMKH 213 (351)
Q Consensus 137 lP~~~d~r~--~-~~v~dQg~cGSCWAfA~~~alE~~~~~~~g~~~~LS~q~l~dc~~~~~~~gC~GG~~~~a~~~l~~~ 213 (351)
+|.+||+|. . .+|+||+.||||||||++++||+++++++++.++||+|+|+||+. .+.||+||++..|++|++++
T Consensus 1 lP~~~DwR~~~~v~~VkdQg~cGsCWAfa~~~~~e~~~~i~~g~~~~lS~q~l~dC~~--~~~gC~GG~~~~a~~~~~~~ 78 (215)
T 1iwd_A 1 LPSFVDWRSKGAVNSIKNQKQCGSCWAFSAVAAVESINKIRTGQLISLSEQELVDCDT--ASHGCNGGWMNNAFQYIITN 78 (215)
T ss_dssp CCSCEEGGGGTCSCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT--TSCTTBCCCHHHHHHHHHHH
T ss_pred CCCcEeCCCCCCCCCcccCCCCchHHHHHHHHHHHHHHHHhcCCccccChhHeEECcC--CCCCCCCCCHHHHHHHHHHh
Confidence 466666664 3 488999999999999999999999999999999999999999985 37899999999999999998
Q ss_pred -CCCCCCCCCCCCCCCCccccCCCCceeeEeeEEEecCCCHHHHHHHHHcCCCEEEEEEcCccccccccCcEEecCCCCC
Q psy3960 214 -GLPTQDDYGPYLGQDAYCHIANTTATATMTGFVNVTPNSEDALKLALAKHGPVSVAIDASQKSFSFYVNGVYYDEKCNN 292 (351)
Q Consensus 214 -Gi~~e~~y~PY~~~~~~C~~~~~~~~~~i~~y~~v~~~~~~~ik~aL~~~GPV~v~i~~~~~~f~~y~~Giy~~~~~~~ 292 (351)
|+++|++| ||.+.++.|+... ...+++.+|..++..++++||++|++ |||+++|++..++|++|++|||.. .|..
T Consensus 79 ~Gi~~e~~y-PY~~~~~~C~~~~-~~~~~i~~~~~v~~~~~~~ik~~l~~-GPV~v~i~~~~~~f~~Y~~Gvy~~-~c~~ 154 (215)
T 1iwd_A 79 GGIDTQQNY-PYSAVQGSCKPYR-LRVVSINGFQRVTRNNESALQSAVAS-QPVSVTVEAAGAPFQHYSSGIFTG-PCGT 154 (215)
T ss_dssp TCBCBTTTS-CCCSSCCCCCTTC-CCCBCCCEEEECCTTCHHHHHHHHHH-SCEEEEECCCSHHHHTCCSSEECC-CCCC
T ss_pred CCccccccc-CccCCCCCCCCCC-CceEEeCcEEEeCCCcHHHHHHHHHh-CCEEEEEecCCcchhhcCCceECC-CCCC
Confidence 99999999 9999999998754 46789999999988889999999987 999999999844899999999975 5753
Q ss_pred CCCCCCeEEEEEEEeeeCCeeEEEEEcCCCCCCCCCcEEEEEecC----CeeeecCCcEEeeC
Q psy3960 293 SPDGLDHAVLAVGYGELDGKPYWQVKNSWSTYWGNQGYVLMSIKD----NNCGVMTAPTYVTM 351 (351)
Q Consensus 293 ~~~~~~HaV~iVGyg~~~g~~ywivkNSWG~~WG~~GY~~Is~~~----n~cgi~~~~~~~~~ 351 (351)
.++|||+|||||+++|++|||||||||++||++|||||+|+. |.|||+++++||++
T Consensus 155 ---~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 214 (215)
T 1iwd_A 155 ---AQNHGVVIVGYGTQSGKNYWIVRNSWGQNWGNQGYIWMERNVASSAGLCGIAQLPSYPTK 214 (215)
T ss_dssp ---CCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSCSSTTCGGGTTSSCEEEEC
T ss_pred ---cCCEEEEEEEEeccCCccEEEEEeCCCCCcCCCcEEEEEcCCCCCCCCCCccccceeeee
Confidence 579999999999999999999999999999999999999986 89999999999986
No 19
>3u8e_A Papain-like cysteine protease; papain-like cysteine peptidase, peptidase_C1A, hydrolase, in form; 1.31A {Crocus sativus} SCOP: d.3.1.0
Probab=100.00 E-value=1.8e-59 Score=429.53 Aligned_cols=209 Identities=37% Similarity=0.782 Sum_probs=183.9
Q ss_pred cCcceeec--CC-CccccCCccCchhhhhhHHHHHHHHHHhcCCceecCHHHHhhhcCCCCCCCCCCCchHHHHHHHHHc
Q psy3960 137 IPVRYEMK--GY-NSLLDQSVCGSCWSFGTTGAVEGAYYMKHKKLAVLSQQALIDCSWGYGNNGCDGGEDFRSYQWIMKH 213 (351)
Q Consensus 137 lP~~~d~r--~~-~~v~dQg~cGSCWAfA~~~alE~~~~~~~g~~~~LS~q~l~dc~~~~~~~gC~GG~~~~a~~~l~~~ 213 (351)
+|.+||+| ++ .+|+||+.||||||||++++||+++++++++.+.||+|+|+||+.. +.||+||++..|++|++++
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGSCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~--~~gC~GG~~~~a~~~~~~~ 78 (222)
T 3u8e_A 1 APASIDWRKKGAVTSVKDQGACGMCWAFGATGAIEGIDAITTGRLISVSEQQIVDCDTX--XXXXXGGDADDAFRWVITN 78 (222)
T ss_dssp CCSCEEGGGGTCCCCCCBCCSCSSCTTTTHHHHHHHHHHHHHSCCCCBCHHHHHHHCC--------CCCHHHHHHHHHHH
T ss_pred CCCcCcCCcCCCCCCcccCCCCccHHHHHHHHHHHHHHHHHcCCCcccCHHHHHhccCc--ccccCCCCHHHHHHHHHHc
Confidence 45666666 44 4889999999999999999999999999999999999999999953 8899999999999999999
Q ss_pred -CCCCCCCCCCCCCCCCccccCCCCceeeEeeEEEecCCCHHHHHHHHHcCCCEEEEEEcCccccccccC-cEEecCCCC
Q psy3960 214 -GLPTQDDYGPYLGQDAYCHIANTTATATMTGFVNVTPNSEDALKLALAKHGPVSVAIDASQKSFSFYVN-GVYYDEKCN 291 (351)
Q Consensus 214 -Gi~~e~~y~PY~~~~~~C~~~~~~~~~~i~~y~~v~~~~~~~ik~aL~~~GPV~v~i~~~~~~f~~y~~-Giy~~~~~~ 291 (351)
|+++|++| ||.+.++.|+..... .+++.+|..++ .++++||++|. +|||+++|+++.++|++|++ |||..+.|.
T Consensus 79 ~Gi~~e~~y-PY~~~~~~C~~~~~~-~~~i~~~~~v~-~~~~~i~~~l~-~GPV~v~i~~~~~~f~~Y~~~Giy~~~~~~ 154 (222)
T 3u8e_A 79 GGIASDANY-PYTGVDGTCDLNKPI-AARIDGYTNVP-NSSSALLDAVA-KQPVSVNIYTSSTSFQLYTGPGIFAGSSCS 154 (222)
T ss_dssp TCBCBTTTS-CCCSSCCCCCCCSCC-CBCCCEEEECC-SCHHHHHHHHH-HSCEEEEECCCSHHHHTCCCSSCBCCTTCC
T ss_pred CCccchhcC-CCcccCCccccCCCC-eEEEccEEEeC-CcHHHHHHHHh-CCCEEEEEEecChhhhcEeCCceECCCccc
Confidence 99999999 999999999876555 78999999997 78999999995 59999999998569999999 999887786
Q ss_pred CCCCCCCeEEEEEEEeeeC-CeeEEEEEcCCCCCCCCCcEEEEEecCC----eeeecCCcEEeeC
Q psy3960 292 NSPDGLDHAVLAVGYGELD-GKPYWQVKNSWSTYWGNQGYVLMSIKDN----NCGVMTAPTYVTM 351 (351)
Q Consensus 292 ~~~~~~~HaV~iVGyg~~~-g~~ywivkNSWG~~WG~~GY~~Is~~~n----~cgi~~~~~~~~~ 351 (351)
.....++|||+|||||+++ +++|||||||||++||++|||||+|+.| .|||+++++||++
T Consensus 155 ~~~~~~~HaV~iVGyg~~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~g~Cgi~~~~~~p~~ 219 (222)
T 3u8e_A 155 DDPATVDHTVLIVGYGSNGTNADYWIVKNSWGTEWGIDGYILIRRNTNRPDGVCAIDAWGSYPTK 219 (222)
T ss_dssp CCGGGCCEEEEEEEEEESSTTCEEEEEECSBCTTSTBTTEEEEECSCSCTTCGGGTTSSCEEEEC
T ss_pred CCCCcCCEEEEEEEEeecCCCCcEEEEECCCCCCcccCCEEEEEcCCCCCCCcCCccccceEEEE
Confidence 5334679999999999987 8999999999999999999999999887 8999999999985
No 20
>1yal_A Chymopapain; hydrolase, thiol protease; 1.70A {Carica papaya} SCOP: d.3.1.1 PDB: 1gec_E*
Probab=100.00 E-value=5.3e-59 Score=425.36 Aligned_cols=207 Identities=36% Similarity=0.710 Sum_probs=187.9
Q ss_pred cCcceeecC--C-CccccCCccCchhhhhhHHHHHHHHHHhcCCceecCHHHHhhhcCCCCCCCCCCCchHHHHHHHHHc
Q psy3960 137 IPVRYEMKG--Y-NSLLDQSVCGSCWSFGTTGAVEGAYYMKHKKLAVLSQQALIDCSWGYGNNGCDGGEDFRSYQWIMKH 213 (351)
Q Consensus 137 lP~~~d~r~--~-~~v~dQg~cGSCWAfA~~~alE~~~~~~~g~~~~LS~q~l~dc~~~~~~~gC~GG~~~~a~~~l~~~ 213 (351)
+|.+||+|. . .+|+||+.||||||||++++||+++++++++.++||+|+|+||+ ..+.||+||++..|++|++++
T Consensus 1 lP~~~DwR~~~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~--~~~~gC~GG~~~~a~~~~~~~ 78 (218)
T 1yal_A 1 YPQSIDWRAKGAVTPVKNQGACGSCWAFSTIATVEGINKIVTGNLLELSEQELVDCD--KHSYGCKGGYQTTSLQYVANN 78 (218)
T ss_dssp CCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHC--TTSCTTBCCCHHHHHHHHHHH
T ss_pred CCCcCcCCCCCCCCCCccCccchhHHHHHHHHHHHHHHHHhcCCccccCHHHHHHhc--CCCCCCCCCCHHHHHHHHHHc
Confidence 466777775 3 48899999999999999999999999999999999999999998 367899999999999999999
Q ss_pred CCCCCCCCCCCCCCCCccccCCC-CceeeEeeEEEecCCCHHHHHHHHHcCCCEEEEEEcCccccccccCcEEecCCCCC
Q psy3960 214 GLPTQDDYGPYLGQDAYCHIANT-TATATMTGFVNVTPNSEDALKLALAKHGPVSVAIDASQKSFSFYVNGVYYDEKCNN 292 (351)
Q Consensus 214 Gi~~e~~y~PY~~~~~~C~~~~~-~~~~~i~~y~~v~~~~~~~ik~aL~~~GPV~v~i~~~~~~f~~y~~Giy~~~~~~~ 292 (351)
|+++|++| ||.+.++.|+.... ...+++.+|..++..++++||++|++ |||+++|++++++|++|++|||.. +|..
T Consensus 79 Gi~~e~~y-PY~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~-GPV~v~i~~~~~~f~~Y~~Giy~~-~~~~ 155 (218)
T 1yal_A 79 GVHTSKVY-PYQAKQYKCRATDKPGPKVKITGYKRVPSNCETSFLGALAN-QPLSVLVEAGGKPFQLYKSGVFDG-PCGT 155 (218)
T ss_dssp CBCBTTTS-CCCSSCCCCCGGGCCSCCBCCSEEEECCSSBHHHHHHHHTT-SCEEEEECCCSHHHHTCCSSEECC-SCCS
T ss_pred CCCccccc-cccCCCCCcccCcCCCceEEEeeEEEeCCCCHHHHHHHHHh-CCEEEEEeccchhccccCCceECC-CCCC
Confidence 99999999 99999999987643 46789999999988889999999987 999999999767999999999975 5754
Q ss_pred CCCCCCeEEEEEEEeeeCCeeEEEEEcCCCCCCCCCcEEEEEecC----CeeeecCCcEEeeC
Q psy3960 293 SPDGLDHAVLAVGYGELDGKPYWQVKNSWSTYWGNQGYVLMSIKD----NNCGVMTAPTYVTM 351 (351)
Q Consensus 293 ~~~~~~HaV~iVGyg~~~g~~ywivkNSWG~~WG~~GY~~Is~~~----n~cgi~~~~~~~~~ 351 (351)
.++|||+|||||+++|++|||||||||++||++|||||+|+. |.|||+++++||++
T Consensus 156 ---~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 215 (218)
T 1yal_A 156 ---KLDHAVTAVGYGTSDGKNYIIIKNSWGPNWGEKGYMRLKRQSGNSQGTCGVYKSSYYPFK 215 (218)
T ss_dssp ---CCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECCCSBSCCGGGTTSSCEEEEC
T ss_pred ---CCCEEEEEEEeeccCCccEEEEEeCCCCCcccCcEEEEECCCCCCCCccccccceeeEEE
Confidence 479999999999999999999999999999999999999974 89999999999985
No 21
>2b1m_A SPE31; papain-like, sugar binding protein; HET: NAG FUC PG4; 2.00A {Pachyrhizus erosus} PDB: 2b1n_A*
Probab=100.00 E-value=5.9e-59 Score=432.42 Aligned_cols=209 Identities=35% Similarity=0.737 Sum_probs=190.6
Q ss_pred cCcceeecC--C-CccccCCccCchhhhhhHHHHHHHHHHhcCCceecCHHHHhhhcCCCCCCCCCCCchHHHHHHHHHc
Q psy3960 137 IPVRYEMKG--Y-NSLLDQSVCGSCWSFGTTGAVEGAYYMKHKKLAVLSQQALIDCSWGYGNNGCDGGEDFRSYQWIMKH 213 (351)
Q Consensus 137 lP~~~d~r~--~-~~v~dQg~cGSCWAfA~~~alE~~~~~~~g~~~~LS~q~l~dc~~~~~~~gC~GG~~~~a~~~l~~~ 213 (351)
+|.+||+|. + .+|+||+.||||||||++++||+++++++++.+.||+|+|+||+. .+.||+||++..|++|++++
T Consensus 2 lP~~~DwR~~g~vtpVkdQg~CGsCWAfa~~~~lE~~~~i~~g~~~~LS~q~lvdC~~--~~~gC~GG~~~~a~~y~~~~ 79 (246)
T 2b1m_A 2 APESWDWSKKGVITKVKFQGQCGSGWAFSATGAIEAAHAIATGNLVSLSEQELIDCVD--ESEGCYNGWHYQSFEWVVKH 79 (246)
T ss_dssp CCSCEEGGGTTCCCCCCBCCSSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT--TSBTTTBCCHHHHHHHHHHT
T ss_pred CCCcCCCCCCCCCCCcccCCCCchHHHHHHHHHHHHHHHHHcCCCcccCHHHHHhhcC--CCCCCCCCCHHHHHHHHHHh
Confidence 577777775 3 488999999999999999999999999999999999999999985 67899999999999999998
Q ss_pred -CCCCCCCCCCCCCCCCccccCCCCceeeEeeE---EEecCCCHHHHHHHHHc---CCCEEEEEEcCccccccccCcEEe
Q psy3960 214 -GLPTQDDYGPYLGQDAYCHIANTTATATMTGF---VNVTPNSEDALKLALAK---HGPVSVAIDASQKSFSFYVNGVYY 286 (351)
Q Consensus 214 -Gi~~e~~y~PY~~~~~~C~~~~~~~~~~i~~y---~~v~~~~~~~ik~aL~~---~GPV~v~i~~~~~~f~~y~~Giy~ 286 (351)
|+++|++| ||.+.++.|+.......+++++| ..++..++++||++|++ +|||+++|++ ++|++|++|||.
T Consensus 80 ~Gi~~e~~y-PY~~~~~~C~~~~~~~~~~i~~y~~~~~v~~~~~~~ik~~l~~~~~~GPV~v~i~~--~~f~~Y~~Giy~ 156 (246)
T 2b1m_A 80 GGIASEADY-PYKARDGKCKANEIQDKVTIDNYGVQILSNESTESEAESSLQSFVLEQPISVSIDA--KDFHFYSGGIYD 156 (246)
T ss_dssp TCBCBTTTS-CCCSSCCCCCGGGCCCCBCCSEEEEEECCTTSCHHHHHHHHHHHHHHSCEEEEECC--TTGGGCCSSEEC
T ss_pred CCcCccccc-cccCCCCcCcCCCCCCceeEcCcceeeecCCChHHHHHHHHHhhccCCCEEEEEEc--chhhcccceeec
Confidence 99999999 99999999987666667899999 88877789999999999 6999999999 589999999998
Q ss_pred cCCCCCCCCCCCeEEEEEEEeeeCCeeEEEEEcCCCCCCCCCcEEEEEecC----CeeeecCCcEEeeC
Q psy3960 287 DEKCNNSPDGLDHAVLAVGYGELDGKPYWQVKNSWSTYWGNQGYVLMSIKD----NNCGVMTAPTYVTM 351 (351)
Q Consensus 287 ~~~~~~~~~~~~HaV~iVGyg~~~g~~ywivkNSWG~~WG~~GY~~Is~~~----n~cgi~~~~~~~~~ 351 (351)
.+.|+... .++|||+|||||+++|++|||||||||++||++|||||+|+. |.|||++.++||++
T Consensus 157 ~~~c~~~~-~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~n~CgI~~~~~~p~~ 224 (246)
T 2b1m_A 157 GGNCSSPY-GINHFVLIVGYGSEDGVDYWIAKNSWGEDWGIDGYIRIQRNTGNLLGVCGMNYFASYPII 224 (246)
T ss_dssp CTTCCSSC-CCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECCSSCTTCGGGTTSEEEEEEC
T ss_pred CCCCCCCC-cCceEEEEEEEeccCCceEEEEEeCCCCcccCCcEEEEEcCCCCCCccccccceeeEEEe
Confidence 87786531 379999999999999999999999999999999999999987 89999999999985
No 22
>1xkg_A DER P I, major mite fecal allergen DER P 1; major allergen, cysteine protease, house DUST mite, dermatop pteronyssinus; 1.61A {Dermatophagoides pteronyssinus} SCOP: d.3.1.1
Probab=100.00 E-value=4.6e-59 Score=446.52 Aligned_cols=208 Identities=26% Similarity=0.549 Sum_probs=191.7
Q ss_pred CcCcceeecCC---CccccCCccCchhhhhhHHHHHHHHHHhcCCceecCHHHHhhhcCCCCCCCCCCCchHHHHHHHHH
Q psy3960 136 AIPVRYEMKGY---NSLLDQSVCGSCWSFGTTGAVEGAYYMKHKKLAVLSQQALIDCSWGYGNNGCDGGEDFRSYQWIMK 212 (351)
Q Consensus 136 plP~~~d~r~~---~~v~dQg~cGSCWAfA~~~alE~~~~~~~g~~~~LS~q~l~dc~~~~~~~gC~GG~~~~a~~~l~~ 212 (351)
.+|.+||||.. .+|+|||.||||||||++++||+++++++|+.+.||+|+|+||+ ...||+||++..|++|+.+
T Consensus 89 ~lP~~~DwR~~g~vtpVkdQg~CGSCWAFsa~~alE~~~~i~~g~~~~LSeq~lvdC~---~~~GC~GG~~~~a~~yi~~ 165 (312)
T 1xkg_A 89 NAPAEIDLRQMRTVTPIRMQGGCGSAWAFSGVAATESAYLAYRDQSLDLAEQELVDCA---SQHGCHGDTIPRGIEYIQH 165 (312)
T ss_dssp CCCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHT---CSSTTBCCCHHHHHHHHHH
T ss_pred cCCCccccccCCCcCCccccCCCCccHHHHHHHHHHHHHHHHhCCCCCcCHHHHHhcc---CCCCCCCCCHHHHHHHHHH
Confidence 57777777754 48899999999999999999999999999999999999999998 1289999999999999999
Q ss_pred cCCCCCCCCCCCCCCCCccccCCCCceeeEeeEEEecCCCHHHHHHHHHc-CCCEEEEEEcCcc-ccccccCcEEecCCC
Q psy3960 213 HGLPTQDDYGPYLGQDAYCHIANTTATATMTGFVNVTPNSEDALKLALAK-HGPVSVAIDASQK-SFSFYVNGVYYDEKC 290 (351)
Q Consensus 213 ~Gi~~e~~y~PY~~~~~~C~~~~~~~~~~i~~y~~v~~~~~~~ik~aL~~-~GPV~v~i~~~~~-~f~~y~~Giy~~~~~ 290 (351)
.||++|++| ||.+.++.|+ ......++|++|..|+..++++||++|++ +|||+|+|+++.. +|++|++|||..+.|
T Consensus 166 ~Gi~~e~~y-PY~~~~~~C~-~~~~~~~~i~~y~~v~~~~~~~ik~al~~~~GPV~v~i~~~~~~~f~~Y~~GVy~~~~c 243 (312)
T 1xkg_A 166 NGVVQESYY-RYVAREQSCR-RPNAQRFGISNYCQIYPPNANKIREALAQTHSAIAVIIGIKDLDAFRHYDGRTIIQRDN 243 (312)
T ss_dssp HCEEBGGGS-CCCSSCCCCC-CCSSCEECCSEEEECCSCCHHHHHHHHHHHCCCEEEEEEESCHHHHHTCCSSSCBCCCC
T ss_pred cCCCccccC-CccCCCCCCC-CCCCceEEEeeEEEeCCCCHHHHHHHHHhcCCCEEEEEEecccccccccCCcEEcCCCC
Confidence 999999999 9999999999 55556799999999987899999999999 9999999999843 899999999998888
Q ss_pred C-CCCCCCCeEEEEEEEeeeCCeeEEEEEcCCCCCCCCCcEEEEEecCCeeeecCCcEEeeC
Q psy3960 291 N-NSPDGLDHAVLAVGYGELDGKPYWQVKNSWSTYWGNQGYVLMSIKDNNCGVMTAPTYVTM 351 (351)
Q Consensus 291 ~-~~~~~~~HaV~iVGyg~~~g~~ywivkNSWG~~WG~~GY~~Is~~~n~cgi~~~~~~~~~ 351 (351)
. .. . +|||+|||||+++|++|||||||||++||++|||||+|+.|.|||++.++||++
T Consensus 244 ~~~~--~-~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~n~CgI~~~~~~~~~ 302 (312)
T 1xkg_A 244 GYQP--N-YHAVNIVGYSNAQGVDYWIVRNSWDTNWGDNGYGYFAANIDLMMIEEYPYVVIL 302 (312)
T ss_dssp SSCC--E-EEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSSCGGGTTTCCEEEEC
T ss_pred CCCc--C-ceEEEEEEEeccCCceEEEEEeCCCCcccCCcEEEEEcCCCcccccceeEEeec
Confidence 6 32 5 999999999999999999999999999999999999999999999999999975
No 23
>3i06_A Cruzipain; autocatalytic cleavage, glycoprotein, protease, thiol protease, zymogen; HET: QL2; 1.10A {Trypanosoma cruzi} SCOP: d.3.1.1 PDB: 1ewm_A* 1ewo_A* 1ewl_A* 1f29_A* 1ewp_A* 1f2b_A* 1f2c_A* 1f2a_A* 1me4_A* 1u9q_X* 2aim_A* 2efm_A* 2oz2_A* 1me3_A* 3kku_A* 3lxs_A* 1aim_A* 3iut_A* 3hd3_A* 2p86_A* ...
Probab=100.00 E-value=1e-58 Score=422.60 Aligned_cols=205 Identities=37% Similarity=0.762 Sum_probs=182.3
Q ss_pred cCcceeec--CC-CccccCCccCchhhhhhHHHHHHHHHHhcCCceecCHHHHhhhcCCCCCCCCCCCchHHHHHHHHHc
Q psy3960 137 IPVRYEMK--GY-NSLLDQSVCGSCWSFGTTGAVEGAYYMKHKKLAVLSQQALIDCSWGYGNNGCDGGEDFRSYQWIMKH 213 (351)
Q Consensus 137 lP~~~d~r--~~-~~v~dQg~cGSCWAfA~~~alE~~~~~~~g~~~~LS~q~l~dc~~~~~~~gC~GG~~~~a~~~l~~~ 213 (351)
+|.+||+| ++ .+|+||+.||||||||++++||+++++++++.++||+|+|+||+. .+.||+||++..|++|++++
T Consensus 1 lP~~~Dwr~~g~vtpVkdQg~cGsCWAfa~~~ale~~~~i~~~~~~~lS~q~l~dC~~--~~~gC~GG~~~~a~~y~~~~ 78 (215)
T 3i06_A 1 APAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCDK--TDSGCSGGLMNNAFEWIVQE 78 (215)
T ss_dssp CCSEEEGGGGTCCCCCCBCCSSCCHHHHHHHHHHHHHHHHTTSCCCCCCHHHHHHHCS--SSCGGGCCCHHHHHHHHHHH
T ss_pred CCCcccCCcCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHhCCCCCccCHHHHhccCC--CCCCCCCCCHHHHHHHHHHh
Confidence 35555655 44 488999999999999999999999999999999999999999984 57899999999999999986
Q ss_pred ---CCCCCCCCCCCCCCCC---ccccCCCCceeeEeeEEEecCCCHHHHHHHHHcCCCEEEEEEcCccccccccCcEEec
Q psy3960 214 ---GLPTQDDYGPYLGQDA---YCHIANTTATATMTGFVNVTPNSEDALKLALAKHGPVSVAIDASQKSFSFYVNGVYYD 287 (351)
Q Consensus 214 ---Gi~~e~~y~PY~~~~~---~C~~~~~~~~~~i~~y~~v~~~~~~~ik~aL~~~GPV~v~i~~~~~~f~~y~~Giy~~ 287 (351)
|+++|++| ||.+.++ .|+.......+++++|..++. ++++||++|+++|||+++|++. +|++|++|||..
T Consensus 79 ~~gGi~~e~~y-PY~~~~~~~~~C~~~~~~~~~~i~~~~~v~~-~~~~ik~~l~~~gPV~v~~~~~--~f~~Y~~Giy~~ 154 (215)
T 3i06_A 79 NNGAVYTEDSY-PYASGEGISPPCTTSGHTVGATITGHVELPQ-DEAQIAAWLAVNGPVAVAVDAS--SWMTYTGGVMTS 154 (215)
T ss_dssp STTEEEC-CCS-CCCCTTSCCCCCCCSSCCEEEEEEEEEECCS-CHHHHHHHHHHHCCEEEEECCT--TGGGCCSSEECS
T ss_pred ccccccccCcc-CCcCCCCCCCccccCCcccceEecceEEeCC-hHHHHHHHHHHCCCEEEEEEch--HHhcCCCCcccC
Confidence 69999999 9997654 688766667789999999965 8999999999999999999984 899999999963
Q ss_pred CCCCCCCCCCCeEEEEEEEeeeCCeeEEEEEcCCCCCCCCCcEEEEEecCCeeeecCCcEEeeC
Q psy3960 288 EKCNNSPDGLDHAVLAVGYGELDGKPYWQVKNSWSTYWGNQGYVLMSIKDNNCGVMTAPTYVTM 351 (351)
Q Consensus 288 ~~~~~~~~~~~HaV~iVGyg~~~g~~ywivkNSWG~~WG~~GY~~Is~~~n~cgi~~~~~~~~~ 351 (351)
|... .++|||+|||||++++++|||||||||++||++|||||+|+.|+|||+++++||+|
T Consensus 155 --~~~~--~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~Gy~~i~rg~n~cgi~~~~~~~~~ 214 (215)
T 3i06_A 155 --CVSE--QLDHGVLLVGYNDSAAVPYWIIKNSWTTQWGEEGYIRIAKGSNQCLVKEEASSAVV 214 (215)
T ss_dssp --CCCS--CCCEEEEEEEEESSSSSCEEEEECSBCTTSTBTTEEEEESSSCGGGTTSSEEEEEE
T ss_pred --CCCC--ccCcEEEEEEEeccCCcEEEEEECCCCCCcccCceEEEecCCCeecCCCceeEEec
Confidence 5332 57999999999999999999999999999999999999999999999999999975
No 24
>2cio_A Papain; hydrolase/inhibitor, complex hydrolase/inhibitor, ICP, cysteine protease, allergen, protease, thiol protease; 1.5A {Carica papaya} PDB: 1khq_A 1khp_A 1ppn_A 3e1z_B 3ima_A 3lfy_A 9pap_A 1bqi_A* 1bp4_A* 1pad_A 1pe6_A* 1pip_A* 1pop_A* 1ppd_A 1ppp_A* 1stf_E* 2pad_A 4pad_A* 5pad_A* 6pad_A* ...
Probab=100.00 E-value=3.8e-58 Score=418.01 Aligned_cols=203 Identities=35% Similarity=0.716 Sum_probs=184.5
Q ss_pred cCcceeecC--C-CccccCCccCchhhhhhHHHHHHHHHHhcCCceecCHHHHhhhcCCCCCCCCCCCchHHHHHHHHHc
Q psy3960 137 IPVRYEMKG--Y-NSLLDQSVCGSCWSFGTTGAVEGAYYMKHKKLAVLSQQALIDCSWGYGNNGCDGGEDFRSYQWIMKH 213 (351)
Q Consensus 137 lP~~~d~r~--~-~~v~dQg~cGSCWAfA~~~alE~~~~~~~g~~~~LS~q~l~dc~~~~~~~gC~GG~~~~a~~~l~~~ 213 (351)
+|.+||+|. . .+|+||+.||||||||++++||+++++++++.++||+|+|+||+. .+.||+||++..|++|++++
T Consensus 1 lP~~~DwR~~~~v~pVkdQg~CGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~--~~~gC~GG~~~~a~~yi~~~ 78 (212)
T 2cio_A 1 IPEYVDWRQKGAVTPVKNQGSCGSCWAFSAVVTIEGIIKIRTGNLNQYSEQELLDCDR--RSYGCNGGYPWSALQLVAQY 78 (212)
T ss_dssp CCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT--TSCTTBCCCHHHHHHHHHHT
T ss_pred CCCcccCCCCCCCCCCccCCccchHHHHHHHHHHHHHHHHhcCCccccCHHHHHHhCC--CCCCCCCCCHHHHHHHHHHh
Confidence 466777775 3 488999999999999999999999999999999999999999985 57899999999999999999
Q ss_pred CCCCCCCCCCCCCCCCccccCC-CCceeeEeeEEEecCCCHHHHHHHHHcCCCEEEEEEcCccccccccCcEEecCCCCC
Q psy3960 214 GLPTQDDYGPYLGQDAYCHIAN-TTATATMTGFVNVTPNSEDALKLALAKHGPVSVAIDASQKSFSFYVNGVYYDEKCNN 292 (351)
Q Consensus 214 Gi~~e~~y~PY~~~~~~C~~~~-~~~~~~i~~y~~v~~~~~~~ik~aL~~~GPV~v~i~~~~~~f~~y~~Giy~~~~~~~ 292 (351)
|+++|++| ||.+.++.|+... ....+++++|..++..++++||++|++ |||+++|+++.++|++|++|||.. +|..
T Consensus 79 Gi~~e~~y-PY~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~-GPV~v~i~~~~~~f~~Y~~Gvy~~-~~~~ 155 (212)
T 2cio_A 79 GIHYRNTY-PYEGVQRYCRSREKGPYAAKTDGVRQVQPYNEGALLYSIAN-QPVSVVLEAAGKDFQLYRGGIFVG-PCGN 155 (212)
T ss_dssp CBCBTTTS-CCCSSCCCCCTTTTCSCSBCCSEEEECCSSCHHHHHHHHHH-SCEEEEECCCSHHHHTCCSSEECC-CCCS
T ss_pred CcCccccc-CCcCCCCCcCCCCCCCceEEEeeEEEeCCccHHHHHHHHHh-CCEEEEEeccCcchhhcCCceecC-CCCC
Confidence 99999999 9999999998765 356789999999988889999999987 999999999855899999999975 5754
Q ss_pred CCCCCCeEEEEEEEeeeCCeeEEEEEcCCCCCCCCCcEEEEEecC----CeeeecCCcEEeeC
Q psy3960 293 SPDGLDHAVLAVGYGELDGKPYWQVKNSWSTYWGNQGYVLMSIKD----NNCGVMTAPTYVTM 351 (351)
Q Consensus 293 ~~~~~~HaV~iVGyg~~~g~~ywivkNSWG~~WG~~GY~~Is~~~----n~cgi~~~~~~~~~ 351 (351)
.++|||+|||||+ +|||||||||++||++|||||+|+. |.|||+++++||++
T Consensus 156 ---~~~HaV~iVGyg~----~yWivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 211 (212)
T 2cio_A 156 ---KVDHAVAAVGYGP----NYILIKNSWGTGWGENGYIRIKRGTGNSYGVCGLYTSSFYPVK 211 (212)
T ss_dssp ---CCCEEEEEEEEET----TEEEEECSBCTTSTBTTEEEEECSSSCTTCGGGTTSCCEEEEC
T ss_pred ---CCCEEEEEEEecC----CeEEEEeCCCCCcccCcEEEEEcCCCCCCCccCcccceeEEEe
Confidence 4799999999997 8999999999999999999999986 89999999999986
No 25
>3pdf_A Cathepsin C, dipeptidyl peptidase 1; two domains, cystein protease, hydrolase-hydrolase inhibitor; HET: LXV NAG; 1.85A {Homo sapiens} PDB: 1jqp_A* 2djf_B* 1k3b_B* 2djg_B* 2djf_A* 1k3b_A* 2djg_A* 2djf_C* 1k3b_C* 2djg_C*
Probab=100.00 E-value=5.2e-58 Score=456.66 Aligned_cols=280 Identities=24% Similarity=0.447 Sum_probs=185.8
Q ss_pred CCCCceeceeeeeccCcc--ccchhhhhcccccccceeecCeeccceeeccccCccc--ceeEEEEEcc-CCCCCCcCcc
Q psy3960 66 DVSDFKVNIYRLFFLRPR--FHENEKIRYNWTYIGEELVNGIILEKWRLVTSEGEKV--SKYSLWVRYN-KASKDAIPVR 140 (351)
Q Consensus 66 ~~~~f~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~plP~~ 140 (351)
.+..+++..+|--|..+. ..++|.....|+...++.|.|++.++++..+...... ......+... .....++|.+
T Consensus 131 ~~~~~~~~~R~~if~~N~~~I~~~N~~~~~~~~~~~n~faDlT~eEf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~s 210 (441)
T 3pdf_A 131 HLKNSQEKYSNRLYKYDHNFVKAINAIQKSWTATTYMEYETLTLGDMIRRSGGHSRKIPRPKPAPLTAEIQQKILFLPTS 210 (441)
T ss_dssp ---------------------------------------------------------------------------CCCSC
T ss_pred cccchhHHHHHHHHHHHHHHHHHHHccCCceEeecccccccCCHHHHHHHhCCCcccccccccCccccccccccccCCCC
Confidence 333344444444454443 5566665667887668999999999988665321100 0000001100 1123457888
Q ss_pred eeecC------CCccccCCccCchhhhhhHHHHHHHHHHhcCCce--ecCHHHHhhhcCCCCCCCCCCCchHHH-HHHHH
Q psy3960 141 YEMKG------YNSLLDQSVCGSCWSFGTTGAVEGAYYMKHKKLA--VLSQQALIDCSWGYGNNGCDGGEDFRS-YQWIM 211 (351)
Q Consensus 141 ~d~r~------~~~v~dQg~cGSCWAfA~~~alE~~~~~~~g~~~--~LS~q~l~dc~~~~~~~gC~GG~~~~a-~~~l~ 211 (351)
||||. ..+|+|||.||||||||++++||++++++++..+ .||+|+|+||+. .+.||+||++..| ++|++
T Consensus 211 ~DwR~~~g~~~VtpVkdQG~CGSCWAFsa~~alE~~~~i~tg~~~~~~LSeQ~LvdC~~--~~~GC~GG~~~~aa~~yi~ 288 (441)
T 3pdf_A 211 WDWRNVHGINFVSPVRNQASCGSCYSFASMGMLEARIRILTNNSQTPILSPQEVVSCSQ--YAQGCEGGFPYLIAGKYAQ 288 (441)
T ss_dssp EETTCBTTBCCSCCCCBCTTSBCHHHHHHHHHHHHHHHHHHTTSCCCCBCHHHHHHHCT--TSCTTBCCCHHHHTTHHHH
T ss_pred EECCcCCCCCccCcccccCCCchHHHHHHHHHHHHHHHHhccCCCccccCHHHHHhhcc--CCCCCCCCchhHHHHHHHH
Confidence 88885 3489999999999999999999999999998654 599999999985 4889999999987 89999
Q ss_pred HcCCCCCCCCCCCCCCCCccccCCCCceeeEeeEEEec----CCCHHHHHHHHHcCCCEEEEEEcCccccccccCcEEec
Q psy3960 212 KHGLPTQDDYGPYLGQDAYCHIANTTATATMTGFVNVT----PNSEDALKLALAKHGPVSVAIDASQKSFSFYVNGVYYD 287 (351)
Q Consensus 212 ~~Gi~~e~~y~PY~~~~~~C~~~~~~~~~~i~~y~~v~----~~~~~~ik~aL~~~GPV~v~i~~~~~~f~~y~~Giy~~ 287 (351)
++||++|++| ||.+.++.|+.......+++.+|..+. ..++++||++|+++|||+|+|+++ ++|++|++|||..
T Consensus 289 ~~Gi~tE~~y-PY~~~~~~C~~~~~~~~~~~~~y~~v~~~~~~~~e~~ik~al~~~GPVsvai~a~-~~F~~Y~sGVy~~ 366 (441)
T 3pdf_A 289 DFGLVEEACF-PYTGTDSPCKMKEDCFRYYSSEYHYVGGFYGGCNEALMKLELVHHGPMAVAFEVY-DDFLHYKKGIYHH 366 (441)
T ss_dssp HTCBCBGGGS-CCCSSCCCSCCCSSCCCBCEEEEEETTSSTTCCCHHHHHHHHHHHCCEEEEECCC-GGGGGCCSSEECC
T ss_pred hcCCCcHHHe-eecccCCCCCCccccceeeeccEEEeCCccCCCcHHHHHHHHHHCCCeEEEEEec-ccccccCCceEec
Confidence 9999999999 999999999987666678889998886 357999999999999999999998 8999999999987
Q ss_pred CCCCC---CCCCCCeEEEEEEEeee--CCeeEEEEEcCCCCCCCCCcEEEEEecCCeeeecCCcEEe
Q psy3960 288 EKCNN---SPDGLDHAVLAVGYGEL--DGKPYWQVKNSWSTYWGNQGYVLMSIKDNNCGVMTAPTYV 349 (351)
Q Consensus 288 ~~~~~---~~~~~~HaV~iVGyg~~--~g~~ywivkNSWG~~WG~~GY~~Is~~~n~cgi~~~~~~~ 349 (351)
+.|.. ....++|||+|||||++ +|++|||||||||++||++|||||+|+.|+|||++.++++
T Consensus 367 ~~~~~~~~~~~~~~HaV~iVGyG~~~~~G~~YWIVkNSWG~~WGe~GYfri~rg~n~CGI~s~~~a~ 433 (441)
T 3pdf_A 367 TGLRDPFNPFELTNHAVLLVGYGTDSASGMDYWIVKNSWGTGWGENGYFRIRRGTDECAIESIAVAA 433 (441)
T ss_dssp C---CCCCCCCCCCEEEEEEEEEECTTTCCEEEEEECSBCTTSTBTTEEEEECSSCGGGTTSCCEEE
T ss_pred CCCCcccCCCCcCCeEEEEEEecccCCCCceEEEEEcCCCCCcCCCeEEEEEcCCCccCCCCceEEe
Confidence 76532 11358999999999985 6899999999999999999999999999999999999865
No 26
>1o0e_A Ervatamin C; plant cysteine protease, two domain, stable at PH 2-12, HYDR; 1.90A {Tabernaemontana divaricata} SCOP: d.3.1.1 PDB: 2pns_A* 2pre_A* 3bcn_A*
Probab=100.00 E-value=8.2e-58 Score=414.71 Aligned_cols=201 Identities=37% Similarity=0.750 Sum_probs=182.0
Q ss_pred cCcceeecC--C-CccccCCccCchhhhhhHHHHHHHHHHhcCCceecCHHHHhhhcCCCCCCCCCCCchHHHHHHHHHc
Q psy3960 137 IPVRYEMKG--Y-NSLLDQSVCGSCWSFGTTGAVEGAYYMKHKKLAVLSQQALIDCSWGYGNNGCDGGEDFRSYQWIMKH 213 (351)
Q Consensus 137 lP~~~d~r~--~-~~v~dQg~cGSCWAfA~~~alE~~~~~~~g~~~~LS~q~l~dc~~~~~~~gC~GG~~~~a~~~l~~~ 213 (351)
+|.+||+|. + .+|+||+.||||||||++++||+++++++++.++||+|+|+||+. .+.||+||++..|++|+.++
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~--~~~gC~GG~~~~a~~y~~~~ 78 (208)
T 1o0e_A 1 LPEQIDWRKKGAVTPVKNQGSCGSCWAFSTVSTVESINQIRTGNLISLSEQELVDCDK--KNHGCLGGAFVFAYQYIINN 78 (208)
T ss_dssp CCSCEEGGGGTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT--TSCTTBCCCHHHHHHHHHHH
T ss_pred CCCcCcCCCCCCCCCCccCCCCccHHHHHHHHHHHHHHHHhcCCceecCHHHhhhhcC--CCCCCCCCCHHHHHHHHHHh
Confidence 356666664 4 488999999999999999999999999999999999999999984 57899999999999999998
Q ss_pred -CCCCCCCCCCCCCCCCccccCCCCceeeEeeEEEecCCCHHHHHHHHHcCCCEEEEEEcCccccccccCcEEecCCCCC
Q psy3960 214 -GLPTQDDYGPYLGQDAYCHIANTTATATMTGFVNVTPNSEDALKLALAKHGPVSVAIDASQKSFSFYVNGVYYDEKCNN 292 (351)
Q Consensus 214 -Gi~~e~~y~PY~~~~~~C~~~~~~~~~~i~~y~~v~~~~~~~ik~aL~~~GPV~v~i~~~~~~f~~y~~Giy~~~~~~~ 292 (351)
|+++|++| ||.+.++.|+. ....+++++|..++..++++||++|++ |||+++|+++.++|++|++|||.. +|..
T Consensus 79 ~Gi~~e~~y-PY~~~~~~C~~--~~~~~~i~~~~~v~~~~~~~i~~~l~~-GPV~v~i~~~~~~f~~Y~~Gvy~~-~c~~ 153 (208)
T 1o0e_A 79 GGIDTQANY-PYKAVQGPCQA--ASKVVSIDGYNGVPFCNEXALKQAVAV-QPSTVAIDASSAQFQQYSSGIFSG-PCGT 153 (208)
T ss_dssp TCBCBTTTS-CCCSSCCCCCC--CCCCBCCCEEEECCTTCHHHHHHHHHH-SCEEEEECCCSHHHHTCCSSEECC-CCCS
T ss_pred CCcCccccc-CccCCCCcCCC--CCceEEeCeEEEeCCCCHHHHHHHHHh-CCEEEEEEccCcccccccCceECC-CCCC
Confidence 99999999 99999999986 445688999999988889999999997 999999999855899999999975 5754
Q ss_pred CCCCCCeEEEEEEEeeeCCeeEEEEEcCCCCCCCCCcEEEEEecC--CeeeecCCcEEeeC
Q psy3960 293 SPDGLDHAVLAVGYGELDGKPYWQVKNSWSTYWGNQGYVLMSIKD--NNCGVMTAPTYVTM 351 (351)
Q Consensus 293 ~~~~~~HaV~iVGyg~~~g~~ywivkNSWG~~WG~~GY~~Is~~~--n~cgi~~~~~~~~~ 351 (351)
.++|||+|||||+ +|||||||||++||++|||||+|+. |.|||+++++||++
T Consensus 154 ---~~~HaV~iVGyg~----~yWivkNSWG~~WGe~Gy~~i~~~~~~~~Cgi~~~~~~p~~ 207 (208)
T 1o0e_A 154 ---KLNHGVTIVGYQA----NYWIVRNSWGRYWGEKGYIRMLRVGGCGLCGIARLPYYPTK 207 (208)
T ss_dssp ---CCCEEEEEEEECS----SEEEEECSBCTTSTBTTEEEEECCSTTCGGGTTSSCEEEEC
T ss_pred ---cCCEEEEEEEeCC----CeEEEEcCCCCcccCCcEEEEEcCCCCCcCCCcccceeeec
Confidence 4799999999997 8999999999999999999999986 89999999999985
No 27
>2bdz_A Mexicain; cysteine protease, peptidase_C1, papain-like, HYDR; HET: E64; 2.10A {Jacaratia mexicana}
Probab=100.00 E-value=7.7e-58 Score=416.59 Aligned_cols=203 Identities=35% Similarity=0.728 Sum_probs=184.6
Q ss_pred cCcceeecCC---CccccCCccCchhhhhhHHHHHHHHHHhcCCceecCHHHHhhhcCCCCCCCCCCCchHHHHHHHHHc
Q psy3960 137 IPVRYEMKGY---NSLLDQSVCGSCWSFGTTGAVEGAYYMKHKKLAVLSQQALIDCSWGYGNNGCDGGEDFRSYQWIMKH 213 (351)
Q Consensus 137 lP~~~d~r~~---~~v~dQg~cGSCWAfA~~~alE~~~~~~~g~~~~LS~q~l~dc~~~~~~~gC~GG~~~~a~~~l~~~ 213 (351)
+|.+||+|.. .+|+||+.||||||||++++||+++++++++.++||+|+|+||+. .+.||+||++..|++|++++
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~--~~~gC~GG~~~~a~~y~~~~ 78 (214)
T 2bdz_A 1 YPESIDWREKGAVTPVKNQNPCGSCWAFSTVATIEGINKIITGQLISLSEQELLDCER--RSHGCDGGYQTTSLQYVVDN 78 (214)
T ss_dssp CCSCEETTTTTCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCBCCBCHHHHHHHCT--TSCTTBCCCHHHHHHHHHHH
T ss_pred CCCcEeCCCCCCCCCCccCCCCccHHHHHhHHHHHHHHHHhcCCccccCHHHHHhhcC--CCCCCCCCCHHHHHHHHHHh
Confidence 4666666653 488999999999999999999999999999999999999999985 57899999999999999999
Q ss_pred CCCCCCCCCCCCCCCCccccCCC-CceeeEeeEEEecCCCHHHHHHHHHcCCCEEEEEEcCccccccccCcEEecCCCCC
Q psy3960 214 GLPTQDDYGPYLGQDAYCHIANT-TATATMTGFVNVTPNSEDALKLALAKHGPVSVAIDASQKSFSFYVNGVYYDEKCNN 292 (351)
Q Consensus 214 Gi~~e~~y~PY~~~~~~C~~~~~-~~~~~i~~y~~v~~~~~~~ik~aL~~~GPV~v~i~~~~~~f~~y~~Giy~~~~~~~ 292 (351)
|+++|++| ||.+.++.|+.... ...+++++|..++..++++||++|++ |||+++|++..++|++|++|||.. +|..
T Consensus 79 Gi~~e~~y-PY~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~-gPV~v~i~~~~~~f~~Y~~Giy~~-~~~~ 155 (214)
T 2bdz_A 79 GVHTEREY-PYEKKQGRCRAKDKKGPKVYITGYKYVPANDEISLIQAIAN-QPVSVVTDSRGRGFQFYKGGIYEG-PCGT 155 (214)
T ss_dssp CEEBTTTS-CCCSSCCCCCTTTCCSCEECCCEEEEECSSBHHHHHHHHHH-SCEEEEECCCSHHHHTCCSSEECC-SCCS
T ss_pred CCCccccC-CCCCCCCCCCCCCCCCceeeecCEEEeCCCcHHHHHHHHHh-CCEEEEEeeChhHhhcccCceecC-CCCC
Confidence 99999999 99999999987655 46789999999988889999999998 999999999866899999999976 4653
Q ss_pred CCCCCCeEEEEEEEeeeCCeeEEEEEcCCCCCCCCCcEEEEEecC----CeeeecCCcEEeeC
Q psy3960 293 SPDGLDHAVLAVGYGELDGKPYWQVKNSWSTYWGNQGYVLMSIKD----NNCGVMTAPTYVTM 351 (351)
Q Consensus 293 ~~~~~~HaV~iVGyg~~~g~~ywivkNSWG~~WG~~GY~~Is~~~----n~cgi~~~~~~~~~ 351 (351)
.++|||+|||||+ +|||||||||++||++|||||+|+. |.|||+++++||++
T Consensus 156 ---~~~HaV~iVGyg~----~yWivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 211 (214)
T 2bdz_A 156 ---NTDHAVTAVGYGK----TYLLLKNSWGPNWGEKGYIRIKRASGRSKGTCGVYTSSFFPIK 211 (214)
T ss_dssp ---CCCEEEEEEEECS----SEEEEECSBCTTSTBTTEEEEECCCSBSSCGGGTTSCEEEEEC
T ss_pred ---CCCeEEEEEEcCC----CeEEEEeCCCCCcccCCEEEEEcCCCCCCCcccccccceEEEe
Confidence 5899999999997 8999999999999999999999985 88999999999985
No 28
>2oul_A Falcipain 2; cysteine protease, inhibitor, macromolecular interaction, HY hydrolase inhibitor complex; 2.20A {Plasmodium falciparum} SCOP: d.3.1.1 PDB: 2ghu_A 1yvb_A 3bpf_A* 3pnr_A
Probab=100.00 E-value=7.5e-58 Score=423.80 Aligned_cols=205 Identities=32% Similarity=0.706 Sum_probs=187.7
Q ss_pred CcCcceeecC--C-CccccCCccCchhhhhhHHHHHHHHHHhcCCceecCHHHHhhhcCCCCCCCCCCCchHHHHHHHHH
Q psy3960 136 AIPVRYEMKG--Y-NSLLDQSVCGSCWSFGTTGAVEGAYYMKHKKLAVLSQQALIDCSWGYGNNGCDGGEDFRSYQWIMK 212 (351)
Q Consensus 136 plP~~~d~r~--~-~~v~dQg~cGSCWAfA~~~alE~~~~~~~g~~~~LS~q~l~dc~~~~~~~gC~GG~~~~a~~~l~~ 212 (351)
.+|.+||+|. . .+|+||+.||||||||++++||+++++++++.++||+|+|++|+. .+.||+||++..|++|+.+
T Consensus 17 ~lP~~~DwR~~~~vtpVkdQg~CGsCWAFaa~~alE~~~~i~~~~~~~lSeq~l~dC~~--~~~gC~GG~~~~a~~yi~~ 94 (241)
T 2oul_A 17 FDHAAYDWRLHSGVTPVKDQKNCGSCWAFSSIGSVESQYAIRKNKLITLSEQELVDCSF--KNYGCNGGLINNAFEDMIE 94 (241)
T ss_dssp CCSSCEEGGGTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHCT--TSCTTBCBCHHHHHHHHHH
T ss_pred cCCCccccCcCCCCCCCccCccchHHHHHHHHHHHHHHHHHhcCCCcccCHHHHHhhcC--CCCCCCCCCHHHHHHHHHH
Confidence 4777788775 3 488999999999999999999999999999999999999999985 3789999999999999998
Q ss_pred -cCCCCCCCCCCCCCCCCc-cccCCCCceeeEeeEEEecCCCHHHHHHHHHcCCCEEEEEEcCccccccccCcEEecCCC
Q psy3960 213 -HGLPTQDDYGPYLGQDAY-CHIANTTATATMTGFVNVTPNSEDALKLALAKHGPVSVAIDASQKSFSFYVNGVYYDEKC 290 (351)
Q Consensus 213 -~Gi~~e~~y~PY~~~~~~-C~~~~~~~~~~i~~y~~v~~~~~~~ik~aL~~~GPV~v~i~~~~~~f~~y~~Giy~~~~~ 290 (351)
.|+++|++| ||.+.++. |+.......+++++|..++..++++||++| |||+++|++. ++|++|++|||.. .|
T Consensus 95 ~~Gi~~e~~y-PY~~~~~~~C~~~~~~~~~~i~~~~~v~~~~~~~ik~~l---GPV~v~i~~~-~~f~~Y~~Giy~~-~c 168 (241)
T 2oul_A 95 LGGICPDGDY-PYVSDAPNLCNIDRCTEKYGIKNYLSVPDNKLKEALRFL---GPISISVAVS-DDFAFYKEGIFDG-EC 168 (241)
T ss_dssp TTSBCBTTSS-CCCTTSCCCCCTTSSSCCBCCSEEEECCTTCHHHHHHHT---CCEEEEECBC-HHHHTCCSSBCCS-CB
T ss_pred hCCcCccccC-CCcCCCCCcCCCCCCccceeeeeEEEeCCCCHHHHHHhh---CCEEEEEecC-cchhhcCCcEEcC-cC
Confidence 599999999 99999888 998766778999999999888899999999 9999999997 7999999999976 67
Q ss_pred CCCCCCCCeEEEEEEEeeeC----------CeeEEEEEcCCCCCCCCCcEEEEEecCCe----eeecCCcEEeeC
Q psy3960 291 NNSPDGLDHAVLAVGYGELD----------GKPYWQVKNSWSTYWGNQGYVLMSIKDNN----CGVMTAPTYVTM 351 (351)
Q Consensus 291 ~~~~~~~~HaV~iVGyg~~~----------g~~ywivkNSWG~~WG~~GY~~Is~~~n~----cgi~~~~~~~~~ 351 (351)
+. .++|||+|||||+++ |++|||||||||++||++|||||+|+.|+ |||+++++||++
T Consensus 169 ~~---~~~HaV~iVGyg~~~~~~~~~~~~~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~g~Cgi~~~~~~~~~ 240 (241)
T 2oul_A 169 GD---QLNHAVMLVGFGMKEIVNPLTKKGEKHYYYIIKNSWGQQWGERGFINIETDESGLMRKCGLGTDAFIPLI 240 (241)
T ss_dssp CS---SCCEEEEEEEEEEEEEECTTTCSEEEEEEEEEECSBCTTSTBTTEEEEEECSSSCCCGGGTTSSEEEEEC
T ss_pred CC---CCCEEEEEEEeccccccccccccCCCCCEEEEEeCCCCCcccCCEEEEEcCCCCCCCcCCccceEEEEee
Confidence 54 289999999999885 78999999999999999999999999887 999999999986
No 29
>1s4v_A Cysteine endopeptidase; KDEL ER retention signal, endosperm, ricinosomes, SEED germi senescence, hydrolase-hydrolase inhibitor complex; 2.00A {Ricinus communis} SCOP: d.3.1.1
Probab=100.00 E-value=8.6e-58 Score=420.34 Aligned_cols=208 Identities=40% Similarity=0.777 Sum_probs=187.3
Q ss_pred cCcceeecCC---CccccCCccCchhhhhhHHHHHHHHHHhcCCceecCHHHHhhhcCCCCCCCCCCCchHHHHHHHHHc
Q psy3960 137 IPVRYEMKGY---NSLLDQSVCGSCWSFGTTGAVEGAYYMKHKKLAVLSQQALIDCSWGYGNNGCDGGEDFRSYQWIMKH 213 (351)
Q Consensus 137 lP~~~d~r~~---~~v~dQg~cGSCWAfA~~~alE~~~~~~~g~~~~LS~q~l~dc~~~~~~~gC~GG~~~~a~~~l~~~ 213 (351)
+|.+||+|.. .+|+||+.||||||||++++||+++++++++.+.||+|+|+||+.. .+.||+||++..||+|+.++
T Consensus 2 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~-~~~gC~GG~~~~a~~y~~~~ 80 (229)
T 1s4v_A 2 VPASVDWRKKGAVTSVKDQGQCGSCWAFSTIVAVEGINQIKTNKLVSLSEQELVDCDTD-QNQGCNGGLMDYAFEFIKQR 80 (229)
T ss_dssp CCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCCS-SCCTTBCBCHHHHHHHHHHH
T ss_pred CCCCEeCCCCCCCCCCccCccchHHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHhhCCC-CCCCCCCCCHHHHHHHHHHh
Confidence 6777777753 4889999999999999999999999999999999999999999853 57899999999999999998
Q ss_pred -CCCCCCCCCCCCCCCCccccCC-CCceeeEeeEEEecCCCHHHHHHHHHcCCCEEEEEEcCccccccccCcEEecCCCC
Q psy3960 214 -GLPTQDDYGPYLGQDAYCHIAN-TTATATMTGFVNVTPNSEDALKLALAKHGPVSVAIDASQKSFSFYVNGVYYDEKCN 291 (351)
Q Consensus 214 -Gi~~e~~y~PY~~~~~~C~~~~-~~~~~~i~~y~~v~~~~~~~ik~aL~~~GPV~v~i~~~~~~f~~y~~Giy~~~~~~ 291 (351)
|+++|++| ||.+.++.|+... ....+++++|..++..++++||++|++ |||+++|++..++|++|++|||.. .|.
T Consensus 81 ~Gi~~e~~y-PY~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~-GPV~v~i~~~~~~f~~Y~~Giy~~-~c~ 157 (229)
T 1s4v_A 81 GGITTEANY-PYEAYDGTCDVSKENAPAVSIDGHENVPENDENALLKAVAN-QPVSVAIDAGGSDFQFYSEGVFTG-SCG 157 (229)
T ss_dssp TCBCBTTTS-CCCSSCCCCCHHHHTCCCBCCCEEEECCTTCHHHHHHHHHH-SCEEEEECCCSHHHHTCCSSEECC-CCC
T ss_pred CCccccccC-CccCCCCCCCCCCCCCcEEEeeeEEEeCCccHHHHHHHHhc-CCEEEEEEeCcHHHhhCCCcEECC-CCC
Confidence 99999999 9999999998642 345688999999988889999999998 999999999557999999999965 575
Q ss_pred CCCCCCCeEEEEEEEeeeC-CeeEEEEEcCCCCCCCCCcEEEEEecC----CeeeecCCcEEeeC
Q psy3960 292 NSPDGLDHAVLAVGYGELD-GKPYWQVKNSWSTYWGNQGYVLMSIKD----NNCGVMTAPTYVTM 351 (351)
Q Consensus 292 ~~~~~~~HaV~iVGyg~~~-g~~ywivkNSWG~~WG~~GY~~Is~~~----n~cgi~~~~~~~~~ 351 (351)
. .++|||+|||||+++ |++|||||||||++||++|||||+|+. |.|||+++++||++
T Consensus 158 ~---~~~HaV~iVGyg~~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~~~~~p~~ 219 (229)
T 1s4v_A 158 T---ELDHGVAIVGYGTTIDGTKYWTVKNSWGPEWGEKGYIRMERGISDKEGLCGIAMEASYPIK 219 (229)
T ss_dssp C---CCCEEEEEEEEEECTTSCEEEEEECSBCTTSTBTTEEEEECSCSSTTCGGGTTSSCEEEEC
T ss_pred C---CCCeEEEEEEeccccCCCCEEEEEeCCCCCccCCcEEEEEcCCCCCCCcCcccccceeeEe
Confidence 4 479999999999986 899999999999999999999999984 89999999999985
No 30
>3bwk_A Cysteine protease falcipain-3; malaria, hydrolase; HET: C1P; 2.42A {Plasmodium falciparum} PDB: 3bpm_A*
Probab=100.00 E-value=8.5e-58 Score=423.93 Aligned_cols=206 Identities=34% Similarity=0.700 Sum_probs=188.0
Q ss_pred CCcCcceeecC--C-CccccCCccCchhhhhhHHHHHHHHHHhcCCceecCHHHHhhhcCCCCCCCCCCCchHHHHHHHH
Q psy3960 135 DAIPVRYEMKG--Y-NSLLDQSVCGSCWSFGTTGAVEGAYYMKHKKLAVLSQQALIDCSWGYGNNGCDGGEDFRSYQWIM 211 (351)
Q Consensus 135 ~plP~~~d~r~--~-~~v~dQg~cGSCWAfA~~~alE~~~~~~~g~~~~LS~q~l~dc~~~~~~~gC~GG~~~~a~~~l~ 211 (351)
..+|.+||+|. . .+|+||+.||||||||++++||+++++++++.++||+|+|++|+. .+.||+||++..|++|+.
T Consensus 18 ~~lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~alE~~~~i~~~~~~~lSeq~lvdC~~--~~~gC~GG~~~~a~~y~~ 95 (243)
T 3bwk_A 18 KLDRIAYDWRLHGGVTPVKDQALCGSCWAFSSVGSVESQYAIRKKALFLFSEQELVDCSV--KNNGCYGGYITNAFDDMI 95 (243)
T ss_dssp CCCCSCEEGGGTTCCCCCCBCCSSCCHHHHHHHHHHHHHHHHHHCSCCCBCHHHHHHHCT--TSCGGGCCCHHHHHHHHH
T ss_pred ccCCCceecCcCCCCCCCccCCCCchHHHHHHHHHHHHHHHHhcCCCcccCHHHHHHhcC--CCCCCCCCCHHHHHHHHH
Confidence 34788888875 3 488999999999999999999999999999999999999999985 378999999999999999
Q ss_pred H-cCCCCCCCCCCCCCCCCc-cccCCCCceeeEeeEEEecCCCHHHHHHHHHcCCCEEEEEEcCccccccccCcEEecCC
Q psy3960 212 K-HGLPTQDDYGPYLGQDAY-CHIANTTATATMTGFVNVTPNSEDALKLALAKHGPVSVAIDASQKSFSFYVNGVYYDEK 289 (351)
Q Consensus 212 ~-~Gi~~e~~y~PY~~~~~~-C~~~~~~~~~~i~~y~~v~~~~~~~ik~aL~~~GPV~v~i~~~~~~f~~y~~Giy~~~~ 289 (351)
+ .|+++|++| ||.+.++. |+.......+++++|..++..++++||++| |||+++|++. ++|++|++|||.. .
T Consensus 96 ~~~Gi~~e~~y-PY~~~~~~~C~~~~~~~~~~i~~~~~v~~~~~~~ik~~l---GPV~v~i~~~-~~f~~Y~~Giy~~-~ 169 (243)
T 3bwk_A 96 DLGGLCSQDDY-PYVSNLPETCNLKRCNERYTIKSYVSIPDDKFKEALRYL---GPISISIAAS-DDFAFYRGGFYDG-E 169 (243)
T ss_dssp HTTSBCBTTTS-CCCTTSCCCCCGGGCSSCBCCCEEEECCTTCHHHHHHHT---CCEEEEECCC-HHHHTCCSSSCCC-C
T ss_pred HhCCccccccc-CCcCCCCCcCCCCCCccceeeeeEEEeCCCCHHHHHHhh---CCEEEEEecC-hhHHhcCCceecC-C
Confidence 8 599999999 99998888 987666677899999999888999999999 9999999997 8999999999977 6
Q ss_pred CCCCCCCCCeEEEEEEEeeeC----------CeeEEEEEcCCCCCCCCCcEEEEEecCCe----eeecCCcEEeeC
Q psy3960 290 CNNSPDGLDHAVLAVGYGELD----------GKPYWQVKNSWSTYWGNQGYVLMSIKDNN----CGVMTAPTYVTM 351 (351)
Q Consensus 290 ~~~~~~~~~HaV~iVGyg~~~----------g~~ywivkNSWG~~WG~~GY~~Is~~~n~----cgi~~~~~~~~~ 351 (351)
|.. .++|||+|||||+++ |++|||||||||++||++|||||+|+.|+ |||+++++||++
T Consensus 170 c~~---~~~HaV~iVGyg~~~~~~~~~~~~~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~g~Cgi~~~~~~~~~ 242 (243)
T 3bwk_A 170 CGA---APNHAVILVGYGMKDIYNEDTGRMEKFYYYIIKNSWGSDWGEGGYINLETDENGYKKTCSIGTEAYVPLL 242 (243)
T ss_dssp CCS---SCCEEEEEEEEEEEEEECTTTCSEEEEEEEEEECSBCTTSTBTTEEEEEECSSSCCCSTTTTSSEEEEEC
T ss_pred CCC---cCCeEEEEEEecCccccccccccCCCCCEEEEEeCCCCCcCCCcEEEEEcCCCCCCCcCCccceEEEEec
Confidence 754 289999999999885 78999999999999999999999998887 999999999986
No 31
>2fo5_A Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cysteine endoprotease, endopeptidase, LEUP hydrolase; HET: AR7; 2.20A {Hordeum vulgare}
Probab=100.00 E-value=1e-57 Score=427.37 Aligned_cols=208 Identities=40% Similarity=0.789 Sum_probs=187.8
Q ss_pred cCcceeecC--C-CccccCCccCchhhhhhHHHHHHHHHHhcCCceecCHHHHhhhcCCCCCCCCCCCchHHHHHHHHHc
Q psy3960 137 IPVRYEMKG--Y-NSLLDQSVCGSCWSFGTTGAVEGAYYMKHKKLAVLSQQALIDCSWGYGNNGCDGGEDFRSYQWIMKH 213 (351)
Q Consensus 137 lP~~~d~r~--~-~~v~dQg~cGSCWAfA~~~alE~~~~~~~g~~~~LS~q~l~dc~~~~~~~gC~GG~~~~a~~~l~~~ 213 (351)
+|.+||+|. . .+|+|||.||||||||++++||+++++++++.+.||+|+|+||+.. .+.||+||++..||+|++++
T Consensus 4 lP~~~DwR~~g~vtpVkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~LSeQ~lvdC~~~-~~~GC~GG~~~~a~~yi~~~ 82 (262)
T 2fo5_A 4 LPPSVDWRQKGAVTGVKDQGKCGSCWAFSTVVSVEGINAIRTGSLVSLSEQELIDCDTA-DNDGCQGGLMDNAFEYIKNN 82 (262)
T ss_dssp CCSCEETTTTTCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCCS-SCCGGGCBCHHHHHHHHHHT
T ss_pred CCCcccCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHhhcCC-CCCCCCCCCHHHHHHHHHHc
Confidence 677777775 3 4889999999999999999999999999999999999999999853 57899999999999999998
Q ss_pred -CCCCCCCCCCCCCCCCccccCC---CCc-eeeEeeEEEecCCCHHHHHHHHHcCCCEEEEEEcCccccccccCcEEecC
Q psy3960 214 -GLPTQDDYGPYLGQDAYCHIAN---TTA-TATMTGFVNVTPNSEDALKLALAKHGPVSVAIDASQKSFSFYVNGVYYDE 288 (351)
Q Consensus 214 -Gi~~e~~y~PY~~~~~~C~~~~---~~~-~~~i~~y~~v~~~~~~~ik~aL~~~GPV~v~i~~~~~~f~~y~~Giy~~~ 288 (351)
|+++|++| ||.+.++.|+... ... .++|.+|..++..++++||++|++ |||+++|+++.++|++|++|||..
T Consensus 83 ~Gi~~e~~y-PY~~~~~~C~~~~~~~~~~~~~~i~~y~~v~~~~e~~ik~al~~-GPV~v~i~~~~~~f~~Y~sGVy~~- 159 (262)
T 2fo5_A 83 GGLITEAAY-PYRAARGTCNVARAAQNSPVVVHIDGHQDVPANSEEDLARAVAN-QPVSVAVEASGKAFMFYSEGVFTG- 159 (262)
T ss_dssp TCEEBTTTS-CCCSSCCCCCHHHHHHHCCCEECCCEEEECCTTCHHHHHHHHHH-SCEEEEECCCSHHHHTCCSSEECC-
T ss_pred CCcCchhcC-CCcCccCccCCcccccCCceeEEeceEEEcCCchHHHHHHHHHh-CCEEEEEecChHHHhccCCceECC-
Confidence 99999999 9999999998654 345 789999999987889999999998 899999999767899999999965
Q ss_pred CCCCCCCCCCeEEEEEEEeee-CCeeEEEEEcCCCCCCCCCcEEEEEecCC----eeeecCCcEEeeC
Q psy3960 289 KCNNSPDGLDHAVLAVGYGEL-DGKPYWQVKNSWSTYWGNQGYVLMSIKDN----NCGVMTAPTYVTM 351 (351)
Q Consensus 289 ~~~~~~~~~~HaV~iVGyg~~-~g~~ywivkNSWG~~WG~~GY~~Is~~~n----~cgi~~~~~~~~~ 351 (351)
.|.. .++|||+|||||++ +|++|||||||||++||++|||||+|+.| .|||++.++||++
T Consensus 160 ~c~~---~~~HaV~IVGyg~~~~G~~YWivkNSWG~~WGe~GY~ri~r~~n~~~~~CgI~~~~~~p~~ 224 (262)
T 2fo5_A 160 ECGT---ELDHGVAVVGYGVAEDGKAYWTVKNSWGPSWGEQGYIRVEKDSGASGGLCGIAMEASYPVK 224 (262)
T ss_dssp CCCC---CCCEEEEEEEEEECTTSCEEEEEECSBCTTSTBTTEEEEESSCSCTTCGGGTTTSCEEEEC
T ss_pred CCCC---cCCEEEEEEEEcccCCCceEEEEEeCCCCCCCCCeEEEEEcCCCCCCCccceeeeeeEEEe
Confidence 5754 47999999999998 58999999999999999999999999864 4999999999985
No 32
>3ioq_A CMS1MS2; caricaceae, cysteine protease, papain family, hydrolase; HET: E64 SO4; 1.87A {Carica candamarcensis} SCOP: d.3.1.1
Probab=100.00 E-value=1.8e-57 Score=413.82 Aligned_cols=203 Identities=33% Similarity=0.685 Sum_probs=179.9
Q ss_pred cCcceeecC--C-CccccCCccCchhhhhhHHHHHHHHHHhcCCceecCHHHHhhhcCCCCCCCCCCCchHHHHHHHHHc
Q psy3960 137 IPVRYEMKG--Y-NSLLDQSVCGSCWSFGTTGAVEGAYYMKHKKLAVLSQQALIDCSWGYGNNGCDGGEDFRSYQWIMKH 213 (351)
Q Consensus 137 lP~~~d~r~--~-~~v~dQg~cGSCWAfA~~~alE~~~~~~~g~~~~LS~q~l~dc~~~~~~~gC~GG~~~~a~~~l~~~ 213 (351)
+|.+||+|. + .+|+||+.||||||||++++||+++++++++.++||+|+|+||+. .+.||+||++..|++|++++
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~--~~~gC~GG~~~~a~~~~~~~ 78 (213)
T 3ioq_A 1 IPTSIDWRQKGAVTPVRNQGGCGSCWTFSSVAAVEGINKIVTGQLLSLSEQELLDCER--RSYGCRGGFPLYALQYVANS 78 (213)
T ss_dssp CCSCEEGGGGTCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT--TSCTTBCCCHHHHHHHHHHH
T ss_pred CCCCCCcccCCCCCCCCcCCCChhHHHHHHHHHHHHHHHHHcCCCcccCHHHhhhhcC--CCCCCCCCCHHHHHHHHHHc
Confidence 355566654 3 488999999999999999999999999999999999999999995 57899999999999999999
Q ss_pred CCCCCCCCCCCCCCCCccccCC-CCceeeEeeEEEecCCCHHHHHHHHHcCCCEEEEEEcCccccccccCcEEecCCCCC
Q psy3960 214 GLPTQDDYGPYLGQDAYCHIAN-TTATATMTGFVNVTPNSEDALKLALAKHGPVSVAIDASQKSFSFYVNGVYYDEKCNN 292 (351)
Q Consensus 214 Gi~~e~~y~PY~~~~~~C~~~~-~~~~~~i~~y~~v~~~~~~~ik~aL~~~GPV~v~i~~~~~~f~~y~~Giy~~~~~~~ 292 (351)
|+++|++| ||.+.++.|+... ....+++.+|..++..+++.++.+| .+|||+++|+++.++|++|++|||.. .|..
T Consensus 79 Gi~~e~~y-PY~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~~~~~~-~~GPV~v~i~~~~~~f~~y~~Giy~~-~~~~ 155 (213)
T 3ioq_A 79 GIHLRQYY-PYEGVQRQCRASQAKGPKVKTDGVGRVPRNNEQALIQRI-AIQPVSIVVEAKGRAFQNYRGGIFAG-PCGT 155 (213)
T ss_dssp CEEBGGGS-CCCSSCCCCCGGGCCSCEECCCEEEECCSSCHHHHHHHH-TTSCEEEEECCCSHHHHTCCSSEECC-SCCS
T ss_pred CCCchhcc-CcCCCCCCCCCCccCCceEEeccEEEeCCchHHHHHHHH-HhCCEEEEEEechhhhhhccCCeEcC-CCCC
Confidence 99999999 9999999998643 4677899999999876766666655 55999999999867999999999977 5543
Q ss_pred CCCCCCeEEEEEEEeeeCCeeEEEEEcCCCCCCCCCcEEEEEecC----CeeeecCCcEEeeC
Q psy3960 293 SPDGLDHAVLAVGYGELDGKPYWQVKNSWSTYWGNQGYVLMSIKD----NNCGVMTAPTYVTM 351 (351)
Q Consensus 293 ~~~~~~HaV~iVGyg~~~g~~ywivkNSWG~~WG~~GY~~Is~~~----n~cgi~~~~~~~~~ 351 (351)
.++|||+|||||+ +|||||||||++||++|||||+|+. |.|||+++++||++
T Consensus 156 ---~~~HaV~iVGyg~----~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~~~~~p~~ 211 (213)
T 3ioq_A 156 ---SIDHAVAAVGYGN----DYILIKNSWGTGWGEGGYIRIKRGSGNPQGACGVLSDSVFPTK 211 (213)
T ss_dssp ---CCCEEEEEEEEET----TEEEEECSBCTTSTBTTEEEEESSCSSTTCGGGTTSCCEEEEC
T ss_pred ---ccCceEEEEecCC----CeEEEECCCCCCcccCCeEEEEcCCCCCCCcccccCcceEeEe
Confidence 5799999999996 8999999999999999999999976 89999999999986
No 33
>3hhi_A Cathepsin B-like cysteine protease; occluding loop, hydrolase, THIO protease; HET: 074; 1.60A {Trypanosoma brucei} SCOP: d.3.1.0 PDB: 4hwy_A* 3mor_A*
Probab=100.00 E-value=1.6e-57 Score=438.25 Aligned_cols=247 Identities=25% Similarity=0.481 Sum_probs=179.4
Q ss_pred ccccccce-eecCeeccceeeccccCcccce----eEEEEEccCCCCCCcCcceeecC------C-CccccCCccCchhh
Q psy3960 93 NWTYIGEE-LVNGIILEKWRLVTSEGEKVSK----YSLWVRYNKASKDAIPVRYEMKG------Y-NSLLDQSVCGSCWS 160 (351)
Q Consensus 93 ~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~plP~~~d~r~------~-~~v~dQg~cGSCWA 160 (351)
.|+. +.+ .|.|++.++|+........... ....+... ....++|.+||+|. . .+|+|||.||||||
T Consensus 25 ~~~~-~~n~~f~dlt~eE~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~lP~s~DwR~~w~~~g~vtpVkdQg~CGSCWA 102 (325)
T 3hhi_A 25 IWKA-KYDGVMQNITLREAKRLNGVIKKNNNASILPKRRFTEE-EARAPLPSSFDSAEAWPNCPTIPQIADQSACGSCWA 102 (325)
T ss_dssp --------------------------------CCSCBCCCCHH-HHHCCCCSCEEHHHHSTTCTTTTCCCBCCSSBCHHH
T ss_pred ceEE-ecccccccCCHHHHHHHhCCCCCCcccccccCcccccc-ccccCCCCcEehhHhcCCCCccccccCCCCccccHH
Confidence 4554 444 7899998888754321110000 00000000 00235788888773 2 48899999999999
Q ss_pred hhhHHHHHHHHHHhcCC-ceecCHHHHhhhcCCCCCCCCCCCchHHHHHHHHHcCCCCCCCCCCCC-CC----------C
Q psy3960 161 FGTTGAVEGAYYMKHKK-LAVLSQQALIDCSWGYGNNGCDGGEDFRSYQWIMKHGLPTQDDYGPYL-GQ----------D 228 (351)
Q Consensus 161 fA~~~alE~~~~~~~g~-~~~LS~q~l~dc~~~~~~~gC~GG~~~~a~~~l~~~Gi~~e~~y~PY~-~~----------~ 228 (351)
||++++||++++++++. .+.||+|+|+||+.. .+.||+||++..|++|++++|+++|++| ||. +. .
T Consensus 103 Fsa~~alE~~~~i~~~~~~~~LSeQ~LvdC~~~-~~~GC~GG~~~~A~~yi~~~Gi~~e~~y-PY~~~~c~~~~~~~~~~ 180 (325)
T 3hhi_A 103 VAAASAMSDRFCTMGGVQDVHISAGDLLACCSD-CGDGCNGGDPDRAWAYFSSTGLVSDYCQ-PYPFPHCSHHSKSKNGY 180 (325)
T ss_dssp HHHHHHHHHHHHHTSSCSSCCBCHHHHHHHCGG-GBCTTBCBCHHHHHHHHHHTCBCBTTTS-CCSSCCCBSSSCCTTCC
T ss_pred HHHHHHHHHHHHHHhCCCccccCHHHHHHhccC-CCCCCCCCCHHHHHHHHHHhCCCccccc-CCccccccccccccccC
Confidence 99999999999999986 899999999999853 4689999999999999999999999999 998 32 2
Q ss_pred CccccC-----C-----------CCceeeEeeEEEecCCCHHHHHHHHHcCCCEEEEEEcCccccccccCcEEecCCCCC
Q psy3960 229 AYCHIA-----N-----------TTATATMTGFVNVTPNSEDALKLALAKHGPVSVAIDASQKSFSFYVNGVYYDEKCNN 292 (351)
Q Consensus 229 ~~C~~~-----~-----------~~~~~~i~~y~~v~~~~~~~ik~aL~~~GPV~v~i~~~~~~f~~y~~Giy~~~~~~~ 292 (351)
+.|+.. . ....+.+..|. + .++++||++|+++|||+|+|+++ ++|++|++|||..+.+..
T Consensus 181 ~~C~~~~~~~~~c~~~c~~~~~~~~~~~~~~~y~-v--~~~~~i~~~i~~~GPV~v~i~~~-~~f~~Y~~GVy~~~~~~~ 256 (325)
T 3hhi_A 181 PPCSQFNFDTPKCDYTCDDPTIPVVNYRSWTSYA-L--QGEDDYMRELFFRGPFEVAFDVY-EDFIAYNSGVYHHVSGQY 256 (325)
T ss_dssp CBGGGCCCCCCCCCSSCSSTTSCCCCBCEEEEEE-E--CSHHHHHHHHHHHCCEEEEEEEE-HHHHTCCSSEECCCSCCE
T ss_pred CCCCCcccCCcchhhcccccccccceEEeecceE-e--CCHHHHHHHHHHCCCEEEEEEec-cccccccCceecCCCCCC
Confidence 567610 0 02234567776 5 68999999999999999999998 799999999997654322
Q ss_pred CCCCCCeEEEEEEEeeeCCeeEEEEEcCCCCCCCCCcEEEEEecCCeeeecCCcEEee
Q psy3960 293 SPDGLDHAVLAVGYGELDGKPYWQVKNSWSTYWGNQGYVLMSIKDNNCGVMTAPTYVT 350 (351)
Q Consensus 293 ~~~~~~HaV~iVGyg~~~g~~ywivkNSWG~~WG~~GY~~Is~~~n~cgi~~~~~~~~ 350 (351)
.++|||+|||||+++|++|||||||||++||++|||||+|+.|+|||++++++++
T Consensus 257 ---~~~HaV~iVGyG~~~g~~YWivkNSWG~~WGe~GY~~i~rg~n~CGI~~~~~~g~ 311 (325)
T 3hhi_A 257 ---LGGHAVRLVGWGTSNGVPYWKIANSWNTEWGMDGYFLIRRGSSECGIEDGGSAGI 311 (325)
T ss_dssp ---EEEEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSSCGGGTTSCEEEEE
T ss_pred ---CCCEEEEEEEEEecCCceEEEEEeCCCCCcccCCEEEEEcCCCeecCccceEEee
Confidence 5799999999999999999999999999999999999999999999999998764
No 34
>3tnx_A Papain; hydrolase, cytoplasm for recombinant expression; 2.62A {Carica papaya}
Probab=100.00 E-value=2.8e-57 Score=441.04 Aligned_cols=252 Identities=29% Similarity=0.574 Sum_probs=202.2
Q ss_pred chhhhhcccccccceeecCeeccceeeccccCcccceeE---EEEEccCCCCCCcCcceeecC--C-CccccCCccCchh
Q psy3960 86 ENEKIRYNWTYIGEELVNGIILEKWRLVTSEGEKVSKYS---LWVRYNKASKDAIPVRYEMKG--Y-NSLLDQSVCGSCW 159 (351)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~plP~~~d~r~--~-~~v~dQg~cGSCW 159 (351)
++|+-...|+ +|.+.|.|++.++|+..+.......... ............+|.+||||. . .+|+|||.|||||
T Consensus 99 ~~N~~~~sy~-~g~N~FaDlT~eEf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~s~DWR~~g~VtpVkdQG~CGSCW 177 (363)
T 3tnx_A 99 ETNKKNNSYW-LGLNVFADMSNDEFKEKYTGSIAGNYTTTELSYEEVLNDGDVNIPEYVDWRQKGAVTPVKNQGSCGSAW 177 (363)
T ss_dssp HHTTSCCSEE-ECSCTTTTSCHHHHHHHHSCSSCSCCCCSSSSSSCCCCCSCCCCCSCEEGGGGTCCCCCCBCCSSBCHH
T ss_pred HHHcCCCCeE-EeccccccCCHHHHHHHhcccccccccccccccccccCcccCCCCcceecccCCCCCCCccCCcCCchh
Confidence 3443333343 5889999999999976653221111000 000001112345677777764 3 3889999999999
Q ss_pred hhhhHHHHHHHHHHhcCCceecCHHHHhhhcCCCCCCCCCCCchHHHHHHHHHcCCCCCCCCCCCCCCCCccccC-CCCc
Q psy3960 160 SFGTTGAVEGAYYMKHKKLAVLSQQALIDCSWGYGNNGCDGGEDFRSYQWIMKHGLPTQDDYGPYLGQDAYCHIA-NTTA 238 (351)
Q Consensus 160 AfA~~~alE~~~~~~~g~~~~LS~q~l~dc~~~~~~~gC~GG~~~~a~~~l~~~Gi~~e~~y~PY~~~~~~C~~~-~~~~ 238 (351)
|||++++||+++++++|+++.||+|+|+||+. .+.||+||.+..|++|+.++|+++|++| ||.+.++.|... ....
T Consensus 178 AFsa~~alE~~~~i~tg~~~~LSeQ~LvdC~~--~~~GC~GG~~~~a~~yi~~~Gi~~e~~y-PY~~~~~~c~~~~~~~~ 254 (363)
T 3tnx_A 178 AFSAVSTIESIIKIRTGNLNEYSEQELLDCDR--RSYGCNGGYPWSALQLVAQYGIHYRNTY-PYEGVQRYCRSREKGPY 254 (363)
T ss_dssp HHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT--TSCTTBCCCHHHHHHHHHHTCBCBTTTS-CCCSSCCCCCGGGGCSC
T ss_pred hhhhcccHHHHHHHHcCCCCCcCHHHHhcccC--CCCCCCCCChHHHHhHHHhcCccccccC-CCcCcCCCcccCCCCCc
Confidence 99999999999999999999999999999985 5689999999999999999999999999 999998877644 3355
Q ss_pred eeeEeeEEEecCCCHHHHHHHHHcCCCEEEEEEcCccccccccCcEEecCCCCCCCCCCCeEEEEEEEeeeCCeeEEEEE
Q psy3960 239 TATMTGFVNVTPNSEDALKLALAKHGPVSVAIDASQKSFSFYVNGVYYDEKCNNSPDGLDHAVLAVGYGELDGKPYWQVK 318 (351)
Q Consensus 239 ~~~i~~y~~v~~~~~~~ik~aL~~~GPV~v~i~~~~~~f~~y~~Giy~~~~~~~~~~~~~HaV~iVGyg~~~g~~ywivk 318 (351)
..++.++..++..++..++.+|++ |||+|+|++..++|++|++|||..+ |.. .++|||+|||||+ +|||||
T Consensus 255 ~~~~~~~~~~~~~~e~~l~~~v~~-gPvsvai~a~~~~F~~Y~sGVy~~~-~~~---~lnHaV~iVGyG~----~YWIVK 325 (363)
T 3tnx_A 255 AAKTDGVRQVQPYNEGALLYSIAN-QPVSVVLEAAGKDFQLYRGGIFVGP-CGN---KVDHAVAAVGYGP----NYILIR 325 (363)
T ss_dssp SBCCCEEEEECSSCHHHHHHHHTT-SCEEEEECCCSHHHHTEEEEEECCC-CCS---CCCEEEEEEEEET----TEEEEE
T ss_pred eeeccceEEcchhhHHHHHHHHHc-CCcEEEEEecchhhhCCCCCEECCC-CCC---CCCeEEEEEEcCC----CcEEEE
Confidence 678888999988888888888865 9999999987789999999999764 644 4799999999985 599999
Q ss_pred cCCCCCCCCCcEEEEEecCCe----eeecCCcEEee
Q psy3960 319 NSWSTYWGNQGYVLMSIKDNN----CGVMTAPTYVT 350 (351)
Q Consensus 319 NSWG~~WG~~GY~~Is~~~n~----cgi~~~~~~~~ 350 (351)
||||++||++|||||+|+.|+ |||+++|+||+
T Consensus 326 NSWGt~WGe~GY~rI~Rg~~~~~~~CGI~~~a~yPi 361 (363)
T 3tnx_A 326 NSWGTGWGENGYIRIKRGTGNSYGVCGLYTSSFYPV 361 (363)
T ss_dssp CSBCTTSTBTTEEEEECCSCCSSCGGGTTSCEEEEE
T ss_pred eCCCCccccCcEEEEEcCCCCCCCcCCccceeeecc
Confidence 999999999999999998644 99999999997
No 35
>3pbh_A Procathepsin B; thiol protease, cysteine protease, proenzyme, papain; 2.50A {Homo sapiens} SCOP: d.3.1.1 PDB: 2pbh_A 1pbh_A 1mir_A
Probab=100.00 E-value=9.7e-56 Score=424.74 Aligned_cols=211 Identities=27% Similarity=0.542 Sum_probs=175.6
Q ss_pred CCcCcceeecCC-------CccccCCccCchhhhhhHHHHHHHHHHhcCC--ceecCHHHHhhhcCCCCCCCCCCCchHH
Q psy3960 135 DAIPVRYEMKGY-------NSLLDQSVCGSCWSFGTTGAVEGAYYMKHKK--LAVLSQQALIDCSWGYGNNGCDGGEDFR 205 (351)
Q Consensus 135 ~plP~~~d~r~~-------~~v~dQg~cGSCWAfA~~~alE~~~~~~~g~--~~~LS~q~l~dc~~~~~~~gC~GG~~~~ 205 (351)
..+|.+||+|.. .+|+|||.||||||||++++||++++++++. ++.||+|+|+||+....+.||+||++..
T Consensus 62 ~~lP~s~DwR~~~~~c~~vtpVkdQg~CGSCWAFsa~~ale~~~~i~~~~~~~~~LSeq~LvdC~~~~~~~GC~GG~~~~ 141 (317)
T 3pbh_A 62 LKLPASFDAREQWPQCPTIKEIRDQGSCGSCWAFGAVEAISDRICIHTNAHVSVEVSAEDLLTCCGSMCGDGCNGGYPAE 141 (317)
T ss_dssp CCCCSSEEHHHHCTTCGGGTCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTSCCCCBCHHHHHHHSCTTTBCGGGCBCHHH
T ss_pred cCCCCCEechhccCCCCCcCCccccCCccchHHHHHHHHHHHHHHHHhCCCCcccCCHHHHHHhccccCCCCCCCCCHHH
Confidence 467888888743 4899999999999999999999999999863 8999999999998644578999999999
Q ss_pred HHHHHHHcCCCCCCCCC------CCCC---------CCCccccCC--------CCcee---------eEeeEEEecCCCH
Q psy3960 206 SYQWIMKHGLPTQDDYG------PYLG---------QDAYCHIAN--------TTATA---------TMTGFVNVTPNSE 253 (351)
Q Consensus 206 a~~~l~~~Gi~~e~~y~------PY~~---------~~~~C~~~~--------~~~~~---------~i~~y~~v~~~~~ 253 (351)
|++|++++||++|++|. ||.. ..+.|+... +...+ .......++ .++
T Consensus 142 A~~yi~~~Gi~te~~Y~~~~~c~PY~~~~c~~~~~~~~~~C~~~~~~~~c~~~c~~~~~~~~~~~~~~~~~~~~v~-~~e 220 (317)
T 3pbh_A 142 AWNFWTRKGLVSGGLYESHVGCRPYSIPPCEHHVNGSRPPCTGEGDTPKCSKICEPGYSPTYKQDKHYGYNSYSVS-NSE 220 (317)
T ss_dssp HHHHHHHTCEEBBCSTTCCCBSSCCCSCCCCCCCTTCCSCCCSCCCCCCCCCSCCSSCCSCGGGSEECBCCCEEEC-SCH
T ss_pred HHHHHHHhCCCcchhccCCCCCcCcccCcccccccCcCCCCCCcCCCCcccccccCCCccceeeeeeeeeecccCC-cHH
Confidence 99999999999988773 8973 345564210 00011 112224553 589
Q ss_pred HHHHHHHHcCCCEEEEEEcCccccccccCcEEecCCCCCCCCCCCeEEEEEEEeeeCCeeEEEEEcCCCCCCCCCcEEEE
Q psy3960 254 DALKLALAKHGPVSVAIDASQKSFSFYVNGVYYDEKCNNSPDGLDHAVLAVGYGELDGKPYWQVKNSWSTYWGNQGYVLM 333 (351)
Q Consensus 254 ~~ik~aL~~~GPV~v~i~~~~~~f~~y~~Giy~~~~~~~~~~~~~HaV~iVGyg~~~g~~ywivkNSWG~~WG~~GY~~I 333 (351)
++||++|+++|||+|+|+++ ++|++|++|||..+ |.. ..++|||+|||||+++|++|||||||||++||++|||||
T Consensus 221 ~~i~~~i~~~GPV~v~i~~~-~~f~~Y~~GVy~~~-~~~--~~~~HaV~iVGyG~~~g~~YWivkNSWG~~WGe~GY~ri 296 (317)
T 3pbh_A 221 KDIMAEIYKNGPVEGAFSVY-SDFLLYKSGVYQHV-TGE--MMGGHAIRILGWGVENGTPYWLVANSWNTDWGDNGFFKI 296 (317)
T ss_dssp HHHHHHHHHHCCEEEEEEEE-GGGGGEEEEEECCC-SCC--EEEEEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEE
T ss_pred HHHHHHHHHCCCEEEEEEec-ccccCCCCcEEccC-CCC--CCCCEEEEEEEEEEeCCeeEEEEEcCCCCCcCCCcEEEE
Confidence 99999999999999999997 89999999999765 432 256999999999999999999999999999999999999
Q ss_pred EecCCeeeecCCcEEee
Q psy3960 334 SIKDNNCGVMTAPTYVT 350 (351)
Q Consensus 334 s~~~n~cgi~~~~~~~~ 350 (351)
+|+.|+|||+++++..+
T Consensus 297 ~rg~n~CgI~~~~~a~~ 313 (317)
T 3pbh_A 297 LRGQDHCGIESEVVAGI 313 (317)
T ss_dssp ECSSCGGGTTTSCEECC
T ss_pred EcCCCcccCCCceEeee
Confidence 99999999999988653
No 36
>3cbj_A Cathepsin B; cathepsin B, occluding loop, chagas disease, glyco hydrolase, lysosome, protease, thiol protease, zymogen, CYT vesicle; 1.80A {Homo sapiens} PDB: 3cbk_A 1gmy_A* 3ai8_B* 3k9m_A 1the_A* 1cpj_A* 1cte_A 2dcc_A* 2dc6_A* 1ito_A* 2dc8_A* 2dc9_A* 2dca_A* 2dcb_A* 2dc7_A* 2dcd_A* 1qdq_A* 1csb_B* 1huc_B 2ipp_B ...
Probab=100.00 E-value=1.8e-55 Score=413.36 Aligned_cols=208 Identities=26% Similarity=0.551 Sum_probs=175.0
Q ss_pred CcCcceeecCC-------CccccCCccCchhhhhhHHHHHHHHHHhcC--CceecCHHHHhhhcCCCCCCCCCCCchHHH
Q psy3960 136 AIPVRYEMKGY-------NSLLDQSVCGSCWSFGTTGAVEGAYYMKHK--KLAVLSQQALIDCSWGYGNNGCDGGEDFRS 206 (351)
Q Consensus 136 plP~~~d~r~~-------~~v~dQg~cGSCWAfA~~~alE~~~~~~~g--~~~~LS~q~l~dc~~~~~~~gC~GG~~~~a 206 (351)
.+|.+||+|.. .+|+|||.||||||||++++||++++++++ ..+.||+|+|+||+..+.+.||+||++..|
T Consensus 6 ~lP~~~D~R~~w~~~~~vt~VkdQg~CGSCWAfa~~~ale~~~~i~~~~~~~~~LS~q~lvdC~~~~~~~gC~GG~~~~a 85 (266)
T 3cbj_A 6 KLPASFDAREQWPQCPTIKEIRDQGSCGSAWAFGAVEAISDRICIHTNAHVSVEVSAEDLLTCCGSMCGDGCNGGYPAEA 85 (266)
T ss_dssp CCCSCEEHHHHSTTCGGGGCCCBCCSSBCHHHHHHHHHHHHHHHHHTTTSCCCCBCHHHHHHHCGGGGBCTTBCBCHHHH
T ss_pred CCCccCcchhccCCCCcCCCCCCCCCcchHHHHHHHHHHHHHHHHHhCCCCccccCHHHHHhhccccCCCCCCCCCHHHH
Confidence 47888887643 388999999999999999999999999875 479999999999985334689999999999
Q ss_pred HHHHHHcCCCC-------CCCCCCCC---------CCCCccccC----C----C----------CceeeEeeEEEecCCC
Q psy3960 207 YQWIMKHGLPT-------QDDYGPYL---------GQDAYCHIA----N----T----------TATATMTGFVNVTPNS 252 (351)
Q Consensus 207 ~~~l~~~Gi~~-------e~~y~PY~---------~~~~~C~~~----~----~----------~~~~~i~~y~~v~~~~ 252 (351)
|+|++++|+++ |++| ||. +..+.|+.. . + ...+.+ .+..++ .+
T Consensus 86 ~~y~~~~Gi~~~~~Y~~~e~~~-PY~~~~~~~~~~~~~~~C~~~~~~p~c~~~c~~~~~~~~~~~~~~~~-~~~~v~-~~ 162 (266)
T 3cbj_A 86 WNFWTRKGLVSGGLYESHVGCR-PYSIPPCEAHVNGARPPCTGEGDTPKCSKICEPGYSPTYKQDKHYGY-NSYSVS-NS 162 (266)
T ss_dssp HHHHHHTCBCBCCSTTCCCSSS-CCCSCCCSCCCSCSSCCCCSCCCCCCCCCSCCTTCCSCTGGGCBCBS-CCEECC-SC
T ss_pred HHHHHHhCcCcCcccccccccc-CcccccccccccCCCCCCccccCCCccccccCCCCcceeeeeeeeee-eeEEeC-CC
Confidence 99999999999 9999 998 345566431 0 0 011222 334564 58
Q ss_pred HHHHHHHHHcCCCEEEEEEcCccccccccCcEEecCCCCCCCCCCCeEEEEEEEeeeCCeeEEEEEcCCCCCCCCCcEEE
Q psy3960 253 EDALKLALAKHGPVSVAIDASQKSFSFYVNGVYYDEKCNNSPDGLDHAVLAVGYGELDGKPYWQVKNSWSTYWGNQGYVL 332 (351)
Q Consensus 253 ~~~ik~aL~~~GPV~v~i~~~~~~f~~y~~Giy~~~~~~~~~~~~~HaV~iVGyg~~~g~~ywivkNSWG~~WG~~GY~~ 332 (351)
+++||++|+++|||+++|++. ++|++|++|||..+ |.. ..++|||+|||||+++|++|||||||||++||++||||
T Consensus 163 ~~~i~~~i~~~GPV~v~i~~~-~~f~~Y~~Gvy~~~-~~~--~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~Gy~~ 238 (266)
T 3cbj_A 163 EKDIMAEIYKNGPVEGAFSVY-SDFLLYKSGVYQHV-TGE--MMGGHAIRILGWGVENGTPYWLVANSWNTDWGDNGFFK 238 (266)
T ss_dssp HHHHHHHHHHHCCEEEEEEEE-GGGGGCCSSEECCC-SSC--EEEEEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEE
T ss_pred HHHHHHHHHhcCCEEEEEEec-cchhhcCCeEEecC-CCC--ccCCeEEEEEEecccCCceEEEEEcCCCCccCCCCEEE
Confidence 999999999999999999998 79999999999764 432 25699999999999999999999999999999999999
Q ss_pred EEecCCeeeecCCcEEee
Q psy3960 333 MSIKDNNCGVMTAPTYVT 350 (351)
Q Consensus 333 Is~~~n~cgi~~~~~~~~ 350 (351)
|+|+.|+|||++.+++++
T Consensus 239 i~rg~n~cgI~~~~~~~~ 256 (266)
T 3cbj_A 239 ILRGQDHCGIESEVVAGI 256 (266)
T ss_dssp EECSSCGGGTTTSCEECC
T ss_pred EEcCCCcccccCceEEEE
Confidence 999999999999999875
No 37
>1deu_A Procathepsin X; cysteine protease, proregion, prosegment, HY; 1.70A {Homo sapiens} SCOP: d.3.1.1 PDB: 1ef7_A
Probab=100.00 E-value=8.1e-55 Score=411.18 Aligned_cols=205 Identities=25% Similarity=0.574 Sum_probs=182.2
Q ss_pred CcCcceeecCC------CccccCC---ccCchhhhhhHHHHHHHHHHhcC-C--ceecCHHHHhhhcCCCCCCCCCCCch
Q psy3960 136 AIPVRYEMKGY------NSLLDQS---VCGSCWSFGTTGAVEGAYYMKHK-K--LAVLSQQALIDCSWGYGNNGCDGGED 203 (351)
Q Consensus 136 plP~~~d~r~~------~~v~dQg---~cGSCWAfA~~~alE~~~~~~~g-~--~~~LS~q~l~dc~~~~~~~gC~GG~~ 203 (351)
.+|.+||+|.. .+|+||+ .||||||||++++||++++++++ + .++||+|+|+||+. ..||+||++
T Consensus 35 ~lP~~~DwR~~~~~~~vtpVkdQg~~~~CGSCWAfa~~~alE~~~~i~~~g~~~~~~LS~Q~lvdC~~---~~gC~GG~~ 111 (277)
T 1deu_A 35 DLPKSWDWRNVDGVNYASITRNQHIPQYCGSCWAHASTSAMADRINIKRKGAWPSTLLSVQNVIDCGN---AGSCEGGND 111 (277)
T ss_dssp GSCSCEETTSBTTBCCCCCCCBTTCSSCCBCHHHHHHHHHHHHHHHHHTTTCSSCCCBCHHHHHHHSS---SEETBEECH
T ss_pred cCCCceecccCCCCCcCCccccCCCCCCCcchHHHHHHHHHHHHHHHHhCCCCCCcccCHHHHHhCcC---CCCCCCCCH
Confidence 47888888863 4889999 99999999999999999999875 4 47999999999984 389999999
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCCCCCcccc-C--------------CCCceeeEeeEEEecCCCHHHHHHHHHcCCCEEE
Q psy3960 204 FRSYQWIMKHGLPTQDDYGPYLGQDAYCHI-A--------------NTTATATMTGFVNVTPNSEDALKLALAKHGPVSV 268 (351)
Q Consensus 204 ~~a~~~l~~~Gi~~e~~y~PY~~~~~~C~~-~--------------~~~~~~~i~~y~~v~~~~~~~ik~aL~~~GPV~v 268 (351)
..||+|+.++|+++|++| ||.+.++.|+. . .....+++.+|..++ ++++||++|+++|||++
T Consensus 112 ~~a~~yi~~~Gi~~e~~y-PY~~~~~~C~~~~~~~~~~~~~~c~~~~~~~~~~i~~y~~v~--~~~~i~~~i~~~GPV~v 188 (277)
T 1deu_A 112 LSVWDYAHQHGIPDETCN-NYQAKDQECDKFNQCGTCNEFKECHAIRNYTLWRVGDYGSLS--GREKMMAEIYANGPISC 188 (277)
T ss_dssp HHHHHHHHHTCBCBGGGS-CCCSSCCCCCHHHHSEEEEETTEEEECSSCCCBCEEEEEEEC--SHHHHHHHHHHHCCEEE
T ss_pred HHHHHHHHHcCCCcCccC-CCcCCCCCccccccccccccCcccccccCcceEEeceeEecC--CHHHHHHHHHHcCCEEE
Confidence 999999999999999999 99998888873 1 112457888898885 58899999999999999
Q ss_pred EEEcCccccccccCcEEecCCCCCCCCCCCeEEEEEEEeeeCCeeEEEEEcCCCCCCCCCcEEEEEecCC--------ee
Q psy3960 269 AIDASQKSFSFYVNGVYYDEKCNNSPDGLDHAVLAVGYGELDGKPYWQVKNSWSTYWGNQGYVLMSIKDN--------NC 340 (351)
Q Consensus 269 ~i~~~~~~f~~y~~Giy~~~~~~~~~~~~~HaV~iVGyg~~~g~~ywivkNSWG~~WG~~GY~~Is~~~n--------~c 340 (351)
+|+++ ++|++|++|||..+.|.. .++|||+|||||+++|++|||||||||++||++|||||+|+.| +|
T Consensus 189 ~i~~~-~~f~~Y~~GIy~~~~~~~---~~~HaV~iVGyg~~~g~~YWivkNSWG~~WGe~GY~~i~rg~n~~g~g~~~~c 264 (277)
T 1deu_A 189 GIMAT-ERLANYTGGIYAEYQDTT---YINHVVSVAGWGISDGTEYWIVRNSWGEPWGERGWLRIVTSTYKDGKGARYNL 264 (277)
T ss_dssp EECCC-HHHHTCCSSEECBCCSCC---CCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECTTHHHHTGGGTBT
T ss_pred EEecc-cccccCcCcEECCCCCCC---cCCeEEEEEEecccCCccEEEEEeCCCCccCCCcEEEEEcCCCcccccccccc
Confidence 99998 799999999998766532 6899999999999999999999999999999999999999998 99
Q ss_pred eecCCcEEee
Q psy3960 341 GVMTAPTYVT 350 (351)
Q Consensus 341 gi~~~~~~~~ 350 (351)
|||++++|++
T Consensus 265 gIe~~~~~~~ 274 (277)
T 1deu_A 265 AIEEHCTFGD 274 (277)
T ss_dssp TTTSCEEEEE
T ss_pred eeccccEeec
Confidence 9999999875
No 38
>3qsd_A Cathepsin B-like peptidase (C01 family); cysteine peptidase, digestive tract, hydrolase-hydrolase INH complex; HET: 074; 1.30A {Schistosoma mansoni} SCOP: d.3.1.0 PDB: 3s3q_A* 3s3r_A*
Probab=100.00 E-value=3e-54 Score=402.51 Aligned_cols=209 Identities=27% Similarity=0.526 Sum_probs=172.7
Q ss_pred CcCcceeecCC-------CccccCCccCchhhhhhHHHHHHHHHHhcC--CceecCHHHHhhhcCCCCCCCCCCCchHHH
Q psy3960 136 AIPVRYEMKGY-------NSLLDQSVCGSCWSFGTTGAVEGAYYMKHK--KLAVLSQQALIDCSWGYGNNGCDGGEDFRS 206 (351)
Q Consensus 136 plP~~~d~r~~-------~~v~dQg~cGSCWAfA~~~alE~~~~~~~g--~~~~LS~q~l~dc~~~~~~~gC~GG~~~~a 206 (351)
.+|.+||+|.. .+|+|||.||||||||++++||++++++++ ..+.||+|+|+||+.. .+.||+||++..|
T Consensus 2 ~lP~s~D~R~~~~~~~~vtpVkdQg~CGSCWAFaa~~ale~~~~i~~~~~~~~~LSeQ~lvdC~~~-~~~GC~GG~~~~a 80 (254)
T 3qsd_A 2 EIPSSFDSRKKWPRCKSIATIRDQSRCGSCWAFGAVEAMSDRSCIQSGGKQNVELSAVDLLSCCES-CGLGCEGGILGPA 80 (254)
T ss_dssp CCCSCEEHHHHCTTCGGGGCCCBCCSSBCHHHHHHHHHHHHHHHHHTTTCCCCCBCHHHHHHHCTT-SBCTTBCBCHHHH
T ss_pred CCCCcCccccccCCCCccCCCCCcccCccHHHHHHHHHHHHHHHHHhCCCccccCCHHHHHhhhcC-CCCCCCCCCHHHH
Confidence 36777787743 388999999999999999999999999986 7899999999999853 4689999999999
Q ss_pred HHHHHHcCCCCCCCCC------CCC---------CCCCccccCC---------CCc---------eeeEeeEEEecCCCH
Q psy3960 207 YQWIMKHGLPTQDDYG------PYL---------GQDAYCHIAN---------TTA---------TATMTGFVNVTPNSE 253 (351)
Q Consensus 207 ~~~l~~~Gi~~e~~y~------PY~---------~~~~~C~~~~---------~~~---------~~~i~~y~~v~~~~~ 253 (351)
|+|++++|+++|++|. ||. +..+.|+... +.. .........++ .++
T Consensus 81 ~~yi~~~Gi~~e~~y~~~~~c~PY~~~~c~~~~~~~~~~C~~~~~~~~~c~~~c~~~~~~~~~~~~~~~~~~~~~~-~~~ 159 (254)
T 3qsd_A 81 WDYWVKEGIVTGSSKENHAGCEPYPFPKCEHHTKGKYPPCGSKIYKTPRCKQTCQKKYKTPYTQDKHRGKSSYNVK-NDE 159 (254)
T ss_dssp HHHHHHTCBCBCCCTTTCCSSSCCSSCCCBCSSCSSSCBCCSCCCCCCCCCCCCCTTCCSCGGGGCBCCSEEEECC-SCH
T ss_pred HHHHHHcCCCcccccccCcCcCCcccccccccccCcCCCCcccccCCccccccccCCccceeeeeeeeeeeeEecC-CcH
Confidence 9999999999987762 886 3444553210 000 00111223453 489
Q ss_pred HHHHHHHHcCCCEEEEEEcCccccccccCcEEecCCCCCCCCCCCeEEEEEEEeeeCCeeEEEEEcCCCCCCCCCcEEEE
Q psy3960 254 DALKLALAKHGPVSVAIDASQKSFSFYVNGVYYDEKCNNSPDGLDHAVLAVGYGELDGKPYWQVKNSWSTYWGNQGYVLM 333 (351)
Q Consensus 254 ~~ik~aL~~~GPV~v~i~~~~~~f~~y~~Giy~~~~~~~~~~~~~HaV~iVGyg~~~g~~ywivkNSWG~~WG~~GY~~I 333 (351)
++||++|+++|||+++|++. ++|++|++|||..+.+. ..++|||+|||||++++++|||||||||++||++|||||
T Consensus 160 ~~i~~~l~~~gPv~~~~~~~-~~f~~y~~Gi~~~~~~~---~~~~Hav~iVGyg~~~g~~ywivkNSWG~~WG~~Gy~~i 235 (254)
T 3qsd_A 160 KAIQKEIMKYGPVEAGFTVY-EDFLNYKSGIYKHITGE---TLGGHAIRIIGWGVENKAPYWLIANSWNEDWGENGYFRI 235 (254)
T ss_dssp HHHHHHHHHHCCEEEEEEEE-GGGGGCCSSEECCCSSC---EEEEEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEE
T ss_pred HHHHHHHHHcCCEEEEEEec-cccccccCCeeccCCCC---CCCCeEEEEEEEeecCCeeEEEEEeCCCCCcccCCeEEE
Confidence 99999999999999999997 79999999999865442 257999999999999999999999999999999999999
Q ss_pred EecCCeeeecCCcEEee
Q psy3960 334 SIKDNNCGVMTAPTYVT 350 (351)
Q Consensus 334 s~~~n~cgi~~~~~~~~ 350 (351)
+|+.|+|||+++++..+
T Consensus 236 ~rg~n~CgI~~~~~~~~ 252 (254)
T 3qsd_A 236 VRGRDECSIESEVTAGR 252 (254)
T ss_dssp ECSSCGGGTTSSEEEEE
T ss_pred EcCCCeecCCCceEeec
Confidence 99999999999998754
No 39
>2wbf_X Serine-repeat antigen protein; SERA, malaria, vacuole, protease, cathepsin, hydrolase, glycoprotein, thiol protease; HET: DMS; 1.60A {Plasmodium falciparum} PDB: 3ch3_X 3ch2_X
Probab=100.00 E-value=1.8e-51 Score=385.77 Aligned_cols=208 Identities=27% Similarity=0.501 Sum_probs=166.9
Q ss_pred cCcceeec-CCC---ccccCCccCchhhhhhHHHHHHHHHHhcCCceecCHHHHhhhcCCCCCCCCCCCc-hHHHHHHHH
Q psy3960 137 IPVRYEMK-GYN---SLLDQSVCGSCWSFGTTGAVEGAYYMKHKKLAVLSQQALIDCSWGYGNNGCDGGE-DFRSYQWIM 211 (351)
Q Consensus 137 lP~~~d~r-~~~---~v~dQg~cGSCWAfA~~~alE~~~~~~~g~~~~LS~q~l~dc~~~~~~~gC~GG~-~~~a~~~l~ 211 (351)
.-.|||.+ +.+ +|+|||.||||||||++++||+++++++++++.||+|+|+||+...++.||+||. ...++++++
T Consensus 9 ~~~dWR~~~~~~~it~VkdQg~CGSCWAFaa~~alE~~~~i~~~~~~~LS~Q~lvdC~~~~~~~GC~GG~~~~~~~~~i~ 88 (265)
T 2wbf_X 9 YCNRLKDENNCISNLQVEDQGNCDTSWIFASKYHLETIRCMKGYEPTKISALYVANCYKGEHKDRCDEGSSPMEFLQIIE 88 (265)
T ss_dssp CBCGGGCTTSTGGGSCCCBCTTSSCHHHHHHHHHHHHHHHHTTCCCCCBCHHHHHHCCSSSCCCTTTCCCCHHHHHHHHH
T ss_pred HHHhhccCCCCCCCCCCcCCCCChhHHHHHHHHHHHHHHHHhcCCCCCcCHHHHHHhhcccCCCCCCCCCCHHHHHHHHH
Confidence 45566666 333 6899999999999999999999999999899999999999999755689999996 455568888
Q ss_pred HcC-CCCCCCCCCCCCC--CCccccCCC-----------------CceeeEeeEEEecCC----C----HHHHHHHHHcC
Q psy3960 212 KHG-LPTQDDYGPYLGQ--DAYCHIANT-----------------TATATMTGFVNVTPN----S----EDALKLALAKH 263 (351)
Q Consensus 212 ~~G-i~~e~~y~PY~~~--~~~C~~~~~-----------------~~~~~i~~y~~v~~~----~----~~~ik~aL~~~ 263 (351)
++| +++|++| ||.+. ++.|+.... ...+++.+|..++.. + +++||++|+++
T Consensus 89 ~~Ggi~~e~~y-PY~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~ik~~i~~~ 167 (265)
T 2wbf_X 89 DYGFLPAESNY-PYNYVKVGEQCPKVEDHWMNLWDNGKILHNKNEPNSLDGKGYTAYESERFHDNMDAFVKIIKTEVMNK 167 (265)
T ss_dssp HHCCCCBTTTS-CCCGGGTTSCCCCCCTTCCCTTTTCEECCCCCSSSTTCCSSEEEEEGGGGTTCHHHHHHHHHHHHHHH
T ss_pred HcCCCCCcccc-CCcCCCCCCCCCCccccccccccccccccccCCCceeecCCceEeeccccccchhhHHHHHHHHHHhc
Confidence 887 9999999 99863 567875321 234578888887652 4 47899999999
Q ss_pred CCEEEEEEcCcccccccc-CcEEecCCCCCCCCCCCeEEEEEEEeee---CC--eeEEEEEcCCCCCCCCCcEEEEEe-c
Q psy3960 264 GPVSVAIDASQKSFSFYV-NGVYYDEKCNNSPDGLDHAVLAVGYGEL---DG--KPYWQVKNSWSTYWGNQGYVLMSI-K 336 (351)
Q Consensus 264 GPV~v~i~~~~~~f~~y~-~Giy~~~~~~~~~~~~~HaV~iVGyg~~---~g--~~ywivkNSWG~~WG~~GY~~Is~-~ 336 (351)
|||+++|++. +|..|. +|++....|+.. .++|||+|||||++ +| ++|||||||||++||++|||||+| +
T Consensus 168 GPV~v~i~~~--~f~~y~~~g~~~~~~c~~~--~~~HaV~iVGyG~~~~~~g~~~~YWivkNSWG~~WGe~GY~ri~~~g 243 (265)
T 2wbf_X 168 GSVIAYIKAE--NVMGYEFSGKKVKNLCGDD--TADHAVNIVGYGNYVNSEGEKKSYWIVRNSWGPYWGDEGYFKVDMYG 243 (265)
T ss_dssp SCEEEEECGG--GGCSGGGGSSSEECCCCCS--CCCEEEEEEEEEEEECTTSCEEEEEEEECSBCTTSTBTTEEEEESSC
T ss_pred CCEEEEEEcc--cccccccCCcEEcCCCCCC--cCCEEEEEEEEeCCcccCCCcCCEEEEEcCCCCccCCCCEEEEEecC
Confidence 9999999985 466664 454443457543 68999999999985 55 689999999999999999999997 5
Q ss_pred CCeeeecCCcEEe
Q psy3960 337 DNNCGVMTAPTYV 349 (351)
Q Consensus 337 ~n~cgi~~~~~~~ 349 (351)
.|.|||++.++++
T Consensus 244 ~n~Cgi~~~~~~~ 256 (265)
T 2wbf_X 244 PTHCHFNFIHSVV 256 (265)
T ss_dssp CTTCSSCSCCEEE
T ss_pred CCccCcceeEEEE
Confidence 7899976655443
No 40
>3ois_A Cysteine protease; alpha and beta, hydrolase; HET: UDP; 1.65A {Xylella fastidiosa}
Probab=100.00 E-value=4.9e-48 Score=367.30 Aligned_cols=194 Identities=21% Similarity=0.255 Sum_probs=164.6
Q ss_pred CcCcceeecCCCccccCCccCchhhhhhHHHHHHHHHHhcCCceecCHHHHh--hhcCC-CCC-CCCCCCchHHHHHHHH
Q psy3960 136 AIPVRYEMKGYNSLLDQSVCGSCWSFGTTGAVEGAYYMKHKKLAVLSQQALI--DCSWG-YGN-NGCDGGEDFRSYQWIM 211 (351)
Q Consensus 136 plP~~~d~r~~~~v~dQg~cGSCWAfA~~~alE~~~~~~~g~~~~LS~q~l~--dc~~~-~~~-~gC~GG~~~~a~~~l~ 211 (351)
++|.+||+|...+|+|||.||||||||++++||+++++ ++..+.||+|+|+ +|... .++ .+|.||++..|++|++
T Consensus 56 ~lP~s~DwR~~~pVkdQG~CGSCWAFAa~~alE~~~~~-~g~~~~lS~q~l~~~~c~~~~~~~~~~c~GG~~~~A~~yi~ 134 (291)
T 3ois_A 56 ALPPKVDLTPPFQVYDQGRIGSCTANALAAAIQFERIH-DKQSPEFIPSRLFIYYNERKIEGHVNYDSGAMIRDGIKVLH 134 (291)
T ss_dssp TCCSEEECCCSSCCCBCTTSSCHHHHHHHHHHHHHHHH-TTCSSCCCBCHHHHHHHHHHHSSCTTSCCCEEHHHHHHHHH
T ss_pred cCCcceecccCCCcccCCCCccHHHHHHHHHHHHHHHH-hCCCCCcCcCHHHHHhhhhhhhcCCCCCCCcCHHHHHHHHH
Confidence 47778888766699999999999999999999999864 6777899999998 67642 233 3588999999999999
Q ss_pred HcCCCCCCCCCCCCCCC---CccccC--------------CCCceeeEeeEEEecCCCHHHHHHHHHcCCCEEEEEEcCc
Q psy3960 212 KHGLPTQDDYGPYLGQD---AYCHIA--------------NTTATATMTGFVNVTPNSEDALKLALAKHGPVSVAIDASQ 274 (351)
Q Consensus 212 ~~Gi~~e~~y~PY~~~~---~~C~~~--------------~~~~~~~i~~y~~v~~~~~~~ik~aL~~~GPV~v~i~~~~ 274 (351)
++||++|++| ||.+.+ +.|+.. .....+++++|..|+. ++++||++|+++|||+++|.++
T Consensus 135 ~~Gi~~e~~y-PY~~~~~~~~~C~~~~~~~~~~~p~~~C~~~~~~~~i~~y~~v~~-~e~~i~~al~~~gPV~v~~~~~- 211 (291)
T 3ois_A 135 KLGVCPEKEW-PYGDTPADPRTEEFPPGAPASKKPSDQCYKDAQNYKITEYSRVAQ-DIDHLKACLAVGSPFVFGFSVY- 211 (291)
T ss_dssp HTCCCBGGGS-CCCCCCCCTTTCSCCTTCGGGSCCCHHHHHHHGGGCCCEEEECCS-CHHHHHHHHHTTCCEEEEEEEE-
T ss_pred HhCCCCHhhC-CCCCCccccccccccccccccCCCCHHHHhhcccceeccEEEcCc-CHHHHHHHHHcCCCEEEEEEec-
Confidence 9999999999 999874 345441 0134688999999976 8999999999999999999998
Q ss_pred cccccccC--cEEecCCCCCCCCCCCeEEEEEEEeeeCCeeEEEEEcCCCCCCCCCcEEEEEec
Q psy3960 275 KSFSFYVN--GVYYDEKCNNSPDGLDHAVLAVGYGELDGKPYWQVKNSWSTYWGNQGYVLMSIK 336 (351)
Q Consensus 275 ~~f~~y~~--Giy~~~~~~~~~~~~~HaV~iVGyg~~~g~~ywivkNSWG~~WG~~GY~~Is~~ 336 (351)
++|+.|++ |||..+.|.. ...++|||+|||||+ +++|||||||||++||++|||||+|+
T Consensus 212 ~~f~~y~~~~Gi~~~~~~~~-~~~~~Hav~iVGy~~--~~~ywivkNSWG~~WG~~Gy~~i~~~ 272 (291)
T 3ois_A 212 NSWVGNNSLPVRIPLPTKND-TLEGGHAVLCVGYDD--EIRHFRIRNSWGNNVGEDGYFWMPYE 272 (291)
T ss_dssp HHHHGGGCCCSBCCCCCTTS-CEEEEEEEEEEEEET--TTTEEEEECSBCTTSTBTTEEEEEHH
T ss_pred cchhhcCCCCeEEeCCCCCC-CCcCCeEEEEEEEeC--CCCEEEEEeCCCCCCCCCcEEEEEHH
Confidence 79999998 9998877743 224699999999984 57899999999999999999999995
No 41
>2cb5_A Protein (bleomycin hydrolase); aminopeptidase, cysteine protease, SELF- compartmentalizing, cylinase; 1.85A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cb5_A
Probab=100.00 E-value=3.7e-39 Score=319.81 Aligned_cols=187 Identities=18% Similarity=0.241 Sum_probs=145.7
Q ss_pred CccccCCccCchhhhhhHHHHHHHHHHh-cCCceecCH----------------HHHhhhcCC------------CCCCC
Q psy3960 147 NSLLDQSVCGSCWSFGTTGAVEGAYYMK-HKKLAVLSQ----------------QALIDCSWG------------YGNNG 197 (351)
Q Consensus 147 ~~v~dQg~cGSCWAfA~~~alE~~~~~~-~g~~~~LS~----------------q~l~dc~~~------------~~~~g 197 (351)
.||+||++||+|||||++++||++++++ +++.+.||+ |+|+||+.. .++.|
T Consensus 61 tpVknQg~cGsCWaFs~~~~le~~~~~k~~~~~~~lSe~yl~fwDKlEkan~flq~lidc~~~~~~~d~R~v~~l~~~~g 140 (453)
T 2cb5_A 61 KPITNQKSSGRSWIFSCLNVMRLPFMKKLNIEEFEFSQSYLFFWDKVERCYFFLSAFVDTAQRKEPEDGRLVQFLLMNPA 140 (453)
T ss_dssp SSCCBCCBSSCHHHHHHHHHHHHHHHHHTTCSCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTSHHHHHHHHCTT
T ss_pred CCcccCCCccchHhhhhHHHHHHHHHHHhcCCeEeeChHHHHHHHHHHHhhHHHHHHHHHHhccCCcchhhHHHhcCCCC
Confidence 4789999999999999999999999999 578999999 999999854 34789
Q ss_pred CCCCchHHHHHHHHHcCCCCCCCCCCCCCCC---------------------------C------c--------------
Q psy3960 198 CDGGEDFRSYQWIMKHGLPTQDDYGPYLGQD---------------------------A------Y-------------- 230 (351)
Q Consensus 198 C~GG~~~~a~~~l~~~Gi~~e~~y~PY~~~~---------------------------~------~-------------- 230 (351)
|+||....|++++.++|+++|++| ||.... + .
T Consensus 141 cdGG~~~~a~~~i~kyGl~p~~~y-P~~~~s~ns~~mn~~L~~kLr~~a~~LR~~~~~g~~~~~l~~~k~~~l~~iy~il 219 (453)
T 2cb5_A 141 NDGGQWDMLVNIVEKYGVIPKKCF-PESYTTEATRRMNDILNHKMREFCIRLRNLVHSGATKGEISATQDVMMEEIFRVV 219 (453)
T ss_dssp CSCBCHHHHHHHHHHHCCCBGGGS-CCCTGGGBCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCChHHHHHHHHHcCccchhhc-cccccccchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999 998741 1 1
Q ss_pred --c----------cc-------------CC-----CCcee--eEeeEEE-------------------------------
Q psy3960 231 --C----------HI-------------AN-----TTATA--TMTGFVN------------------------------- 247 (351)
Q Consensus 231 --C----------~~-------------~~-----~~~~~--~i~~y~~------------------------------- 247 (351)
| .. .+ ..... .+.+|+.
T Consensus 220 ~~clG~pP~~F~~~~~dkd~~~~~~~~~TP~~F~~~~~~~~~~~~~yv~l~n~p~~~~py~~~y~v~~~~Nv~~g~~~~y 299 (453)
T 2cb5_A 220 CICLGNPPETFTWEYRDKDKNYEKIGPITPLEFYREHVKPLFNMEDKICLVNDPRPQHKHNKLYTVEYLSNMVGGRKTLY 299 (453)
T ss_dssp HHHHCCCCSSEEEEEECTTSCEEEEEEECHHHHHHHHTTTTSCGGGEEEEECCCCTTSCSSEEEEETTCCSSTTCCCCCE
T ss_pred HHHcCCCCceeeEEEEccCCcccccCCCCHHHHHHHhcCCcCCCCCeEEEecCCCCcCcccceeEEeecCcccccccccc
Confidence 4 11 00 00011 3444443
Q ss_pred --ecCCCH-HHHHHHHHcCCCEEEEEEcCccccccccCcEEecCCCC-------------------CCCCCCCeEEEEEE
Q psy3960 248 --VTPNSE-DALKLALAKHGPVSVAIDASQKSFSFYVNGVYYDEKCN-------------------NSPDGLDHAVLAVG 305 (351)
Q Consensus 248 --v~~~~~-~~ik~aL~~~GPV~v~i~~~~~~f~~y~~Giy~~~~~~-------------------~~~~~~~HaV~iVG 305 (351)
++..+. +.++.+|.++|||++++++.. +.++++|||....|. ......+|||+|||
T Consensus 300 ~Nvp~~~l~~~~~~al~~g~PV~~~~Dv~~--~~~~k~GI~~~~~~~~~~~fg~~~~~m~KaeRl~~~~s~~~HAmlivG 377 (453)
T 2cb5_A 300 NNQPIDFLKKMVAASIKDGEAVWFGCDVGK--HFNSKLGLSDMNLYDHELVFGVSLKNMNKAERLTFGESLMTHAMTFTA 377 (453)
T ss_dssp EECCHHHHHHHHHHHHHTTCCEEEEECTTT--TEETTTTEECTTSBCHHHHHSCCSCSSCHHHHHHTTSCCCCEEEEEEE
T ss_pred cccCHHHHHHHHHHHHHcCCCEEEEEEeCh--hhccCCcEEcCccccchhhcCccccccCHHHHhhccCCCCCeEEEEEE
Confidence 322121 455688999999999999983 445599998765441 01125799999999
Q ss_pred Ee--ee-CCe-eEEEEEcCCCCCCCCCcEEEEEec
Q psy3960 306 YG--EL-DGK-PYWQVKNSWSTYWGNQGYVLMSIK 336 (351)
Q Consensus 306 yg--~~-~g~-~ywivkNSWG~~WG~~GY~~Is~~ 336 (351)
|| .+ +|+ +|||||||||++||++||++|+++
T Consensus 378 yg~~~d~~G~~~yWiVkNSWG~~wG~~GY~~ms~~ 412 (453)
T 2cb5_A 378 VSEKDDQDGAFTKWRVENSWGEDHGHKGYLCMTDE 412 (453)
T ss_dssp EEECTTSCSCEEEEEEECSBCTTSTBTTEEEEEHH
T ss_pred eccccccCCCccEEEEEcCcCCCcCcCceEEechh
Confidence 99 65 677 899999999999999999999984
No 42
>2e01_A Cysteine proteinase 1; bleomycin hydrolase, thiol protease, C1 protease, hydrolase; 1.73A {Saccharomyces cerevisiae} PDB: 2e02_A 2e03_A 2dzy_A 1a6r_A 2e00_A 2dzz_A 3gcb_A 1gcb_A
Probab=100.00 E-value=8.3e-37 Score=303.28 Aligned_cols=203 Identities=19% Similarity=0.181 Sum_probs=140.5
Q ss_pred ceeecCC-CccccCCccCchhhhhhHHHHHHHHHHh-cCCceecCH----------------HHHhhhcCC-C-------
Q psy3960 140 RYEMKGY-NSLLDQSVCGSCWSFGTTGAVEGAYYMK-HKKLAVLSQ----------------QALIDCSWG-Y------- 193 (351)
Q Consensus 140 ~~d~r~~-~~v~dQg~cGSCWAfA~~~alE~~~~~~-~g~~~~LS~----------------q~l~dc~~~-~------- 193 (351)
+++.... .||+|||+||||||||++++||++++++ +++.++||| |+|+||+.. .
T Consensus 58 ~~~~~~~vtpVknQg~cGsCWaFs~~~~lE~~~~~~~~~~~~~LSe~yl~~~dklEkan~flq~lvdc~~~~~~~r~v~~ 137 (457)
T 2e01_A 58 NTVVSTDSTPVTNQKSSGRCWLFAATNQLRLNVLSELNLKEFELSQAYLFFYDKLEKANYFLDQIVSSADQDIDSRLVQY 137 (457)
T ss_dssp SEECC------------CCHHHHHHHHHHHHHHHHHTTCSSCCBCHHHHHHHHHHHHHHHHHHHHHHTTTSCTTSHHHHH
T ss_pred EEEecCCccCcccCCCCccchhHHhHHHHHHHHHHHhCCCceeeCChhhhhhhHHHHHHHHHHHHHHhcCCcccchhhhh
Confidence 3344433 4799999999999999999999999998 788999999 788999742 1
Q ss_pred --CCCCCCCCchHHHHHHHHHcCCCCCCCCCCC-CCC---------------------------------C---------
Q psy3960 194 --GNNGCDGGEDFRSYQWIMKHGLPTQDDYGPY-LGQ---------------------------------D--------- 228 (351)
Q Consensus 194 --~~~gC~GG~~~~a~~~l~~~Gi~~e~~y~PY-~~~---------------------------------~--------- 228 (351)
.+.+|+||....+++++.++|+++|++| || +.. .
T Consensus 138 l~~~~gcdGG~~~~a~~~i~kyGivpe~~y-P~~s~~s~ns~~~n~~L~~kLr~~a~~lR~~~~~~~~~~~~l~~~~~~~ 216 (457)
T 2e01_A 138 LLAAPTEDGGQYSMFLNLVKKYGLIPKDLY-GDLPYSTTASRKWNSLLTTKLREFAETLRTALKERSADDSIIVTLREQM 216 (457)
T ss_dssp HHHCTTCSCBCHHHHHHHHHHHCCCBGGGS-CSCSHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHSCTTSHHHHHHHHHH
T ss_pred hccCCCCCCCCHHHHHHHHHHcCccchhhc-CCcccCcccHHHHHHHHHHHHHHHHHHHHHHHhccCchhhhHHHHHHHH
Confidence 4789999999999999999999999999 99 311 0
Q ss_pred ------------CccccC---CC--------------------------------------------CceeeE-------
Q psy3960 229 ------------AYCHIA---NT--------------------------------------------TATATM------- 242 (351)
Q Consensus 229 ------------~~C~~~---~~--------------------------------------------~~~~~i------- 242 (351)
|.|... .. ...+.+
T Consensus 217 l~~iy~il~~~LG~pP~~~~~~F~~~~~dkd~~~~~~~~TP~~F~~~~v~~~~~dyV~l~n~p~~py~~~y~ve~~~N~~ 296 (457)
T 2e01_A 217 QREIFRLMSLFMDIPPVQPNEQFTWEYVDKDKKIHTIKSTPLEFASKYAKLDPSTPVSLINDPRHPYGKLIKIDRLGNVL 296 (457)
T ss_dssp HHHHHHHHHHHSCCCSSCTTSCEEEEEECTTSCEEEEEECHHHHHHHTTCCCTTSEEEEECCTTSCTTCEEEETTCCSST
T ss_pred HHHHHHHHHHHcCCCCCCCCceEEEEEEcCCCCccCCCcChHHHHHHHcCCCchheEEEeecCCCccCeeEEEeccCCee
Confidence 001110 00 000010
Q ss_pred ----eeEEEecCCC-HHHHHHHHHcCCCEEEEEEcCccccccccCcEEecCCCC-----------------CCCCCCCeE
Q psy3960 243 ----TGFVNVTPNS-EDALKLALAKHGPVSVAIDASQKSFSFYVNGVYYDEKCN-----------------NSPDGLDHA 300 (351)
Q Consensus 243 ----~~y~~v~~~~-~~~ik~aL~~~GPV~v~i~~~~~~f~~y~~Giy~~~~~~-----------------~~~~~~~Ha 300 (351)
..|.+++... .+.++.+|.++|||++++++. .|++|++||+....|. ......+||
T Consensus 297 ~g~~~~y~Nvp~d~l~~~~~~aL~~g~PV~~~~Dv~--~~~~~~~GI~~~~~~~~~~fg~~~~m~KaeRl~~~~s~~~HA 374 (457)
T 2e01_A 297 GGDAVIYLNVDNETLSKLVVKRLQNNKAVFFGSHTP--KFMDKKTGVMDIELWNYPAIGYNLPQQKASRIRYHESLMTAA 374 (457)
T ss_dssp TCCCEEEEECCHHHHHHHHHHHHHTTCCEEEEECTT--TTEETTTTEECTTSBCGGGGTCCCCCCHHHHHHTTSCCCCEE
T ss_pred cCCceeEEEcCHHHHHHHHHHHHHhCCCEEEEEEcC--HhHcccCceecccccchhhcCcccccCHHHhhccCCCCCCeE
Confidence 1244443211 155677899999999999998 3777899999644320 011257999
Q ss_pred EEEEEEeee-CCe--eEEEEEcCCCCCCCCCcEEEEEecCCeeeecCCcEEe
Q psy3960 301 VLAVGYGEL-DGK--PYWQVKNSWSTYWGNQGYVLMSIKDNNCGVMTAPTYV 349 (351)
Q Consensus 301 V~iVGyg~~-~g~--~ywivkNSWG~~WG~~GY~~Is~~~n~cgi~~~~~~~ 349 (351)
|+|||||.+ +|+ +|||||||||++||++||++|+++ .++..+..+
T Consensus 375 mlivGyg~d~~G~~p~yW~VkNSWG~~wG~~GY~~ms~~----wf~ey~~~i 422 (457)
T 2e01_A 375 MLITGCHVDETSKLPLRYRVENSWGKDSGKDGLYVMTQK----YFEEYCFQI 422 (457)
T ss_dssp EEEEEEEECTTTCCEEEEEEECSSCTTSTBTTEEEEEHH----HHHHHEEEE
T ss_pred EEEEEEEeccCCCccCEEEEEeCccCCcCCCceEEeehh----hHhhccEEE
Confidence 999999986 788 899999999999999999999984 444444443
No 43
>3pw3_A Aminopeptidase C; bleomycin, cysteine proteinase fold, structural genomics, JO center for structural genomics, JCSG; HET: MSE; 2.23A {Parabacteroides distasonis}
Probab=100.00 E-value=1.3e-33 Score=274.89 Aligned_cols=186 Identities=18% Similarity=0.245 Sum_probs=136.9
Q ss_pred CccccCCccCchhhhhhHHHHHHHHHHhcCCceecCHHHHhhhcC----------CCCCCCCCCCchHHHHHHHHHcCCC
Q psy3960 147 NSLLDQSVCGSCWSFGTTGAVEGAYYMKHKKLAVLSQQALIDCSW----------GYGNNGCDGGEDFRSYQWIMKHGLP 216 (351)
Q Consensus 147 ~~v~dQg~cGSCWAfA~~~alE~~~~~~~g~~~~LS~q~l~dc~~----------~~~~~gC~GG~~~~a~~~l~~~Gi~ 216 (351)
.||+||++||||||||++++||+++++++++.+.||+|+|++|.. ...+.||+||....|+++++++||+
T Consensus 23 tpVknQg~cGsCWaFSa~~~lE~~~~~k~~~~~~LSeq~Lvdcd~~ekan~~l~~~g~~~gcdGG~~~~a~~~i~k~Giv 102 (383)
T 3pw3_A 23 TSVKNQNRAGTCWCYSSYSFLESELLRMGKGEYDLSEMFTVYNTYLDRADAAVRTHGDVSFSQGGSFYDALYGMETFGLV 102 (383)
T ss_dssp CCCCBCCBSSCHHHHHHHHHHHHHHHHTTCCCCCBCHHHHHHHHHHHHHHHHHHTTTCSCCCSCCCHHHHHHHHHHTCCC
T ss_pred CCcccCCCCcHHHHHHhHHHHHHHHHHHcCCCCccChHHHHhhchhhhhhhhhhhccCCCCCCCCCHHHHHHHHHHcCcC
Confidence 589999999999999999999999999999999999999999973 1235799999999999999999999
Q ss_pred CCCCCCC------CCCCCC-------------cccc--C--------C-------------------------C------
Q psy3960 217 TQDDYGP------YLGQDA-------------YCHI--A--------N-------------------------T------ 236 (351)
Q Consensus 217 ~e~~y~P------Y~~~~~-------------~C~~--~--------~-------------------------~------ 236 (351)
+|++| | +...+. .+.. . . .
T Consensus 103 pe~~Y-P~~~~~~~~s~n~~~m~~~L~~~Lr~~a~~~~r~l~~~~~~~~~~~~~i~~il~~~LG~pP~~F~~~gk~~TP~ 181 (383)
T 3pw3_A 103 PEEEM-RPGMMYADTLSNHTELSALTDAMVAAIAKGKLRKLQSDENNAMLWKKAVAAVHQIYLGVPPEKFTYKGKEYTPK 181 (383)
T ss_dssp BGGGS-CTTGGGTCSSCBCHHHHHHHHHHHHHHHSSCCSSCCBCTTCCBHHHHHHHHHHHHHHCCCCSSEEETTEEECHH
T ss_pred cHHhC-CCCCCCCccchhHHHHHHHHHHHHHHHHHHHhhhhhhchhhHHHHHHHHHHHHHHHhCCCCceEEecCCCcCHH
Confidence 99999 8 221110 0000 0 0 0
Q ss_pred ----CceeeEeeE----------------------------EEecCCC-HHHHHHHHHcCCCEEEEEEcCccccccccCc
Q psy3960 237 ----TATATMTGF----------------------------VNVTPNS-EDALKLALAKHGPVSVAIDASQKSFSFYVNG 283 (351)
Q Consensus 237 ----~~~~~i~~y----------------------------~~v~~~~-~~~ik~aL~~~GPV~v~i~~~~~~f~~y~~G 283 (351)
.......+| .+++-.. .+.+..+|.++-||.++.+|+...|. +.|
T Consensus 182 ~F~~~v~~~~~dyV~l~n~p~~py~~~y~ve~~~N~~~g~~~Nvp~d~l~~~~~~~Lk~G~~V~fg~DV~~~~f~--~~G 259 (383)
T 3pw3_A 182 SFFESTGLKASDYVSLTSYTHHPFYTQFPLEIQDNWRHGMSYNLPLDEFMEVFDNAINTGYTIAWGSDVSESGFT--RDG 259 (383)
T ss_dssp HHHHHHTCCGGGEEEEECCSSSCTTCEEECCCTTCTTCCEEEECCHHHHHHHHHHHHHTTCCEEEEEECCSTTBC--TTS
T ss_pred HHHHHhCCCccceEEEeeCCCCccCceEEEecCCCccCCccCCcCHHHHHHHHHHHHHcCCcEEEEcccCccccC--CCc
Confidence 000011122 2222101 23455666778899999999944555 889
Q ss_pred EEecCCCC-------------------------------------------CCCCCCCeEEEEEEEee-eCCeeEEEEEc
Q psy3960 284 VYYDEKCN-------------------------------------------NSPDGLDHAVLAVGYGE-LDGKPYWQVKN 319 (351)
Q Consensus 284 iy~~~~~~-------------------------------------------~~~~~~~HaV~iVGyg~-~~g~~ywivkN 319 (351)
|...+... +.....+|||+|||||. ++|++||+|||
T Consensus 260 i~~~~~~~~~~~~~g~~~~~~~~~~kaer~~~~~~~~e~~~tk~~R~~~~d~~~t~~~Ha~~ivG~~~d~~g~~yw~vkN 339 (383)
T 3pw3_A 260 VAVMPDDEKVQELSGSDMAHWLKLKPEEKKLNTKPQPQKWCTQAERQLAYDNYETTDDHGMQIYGIAKDQEGNEYYMVKN 339 (383)
T ss_dssp EECCBCHHHHHHHSSCCHHHHHTSCHHHHCTTTSCCCBCCCCHHHHHHHHHTTSSCCEEEEEEEEEEECTTCCEEEEEEC
T ss_pred eeeCcchhhHHHhcCcchhhhccCCHHHhhhccCCCcccCCCHHHHHHHhhhccCcCCeEEEEEEEEEcCCCceEEEEEe
Confidence 88543110 01124579999999997 57889999999
Q ss_pred CCCCCCCCCcEEEEEe
Q psy3960 320 SWSTYWGNQGYVLMSI 335 (351)
Q Consensus 320 SWG~~WG~~GY~~Is~ 335 (351)
|||++||++||++|++
T Consensus 340 SWg~~~g~~Gy~~m~~ 355 (383)
T 3pw3_A 340 SWGTNSKYNGIWYASK 355 (383)
T ss_dssp SBCSCSTTTTEEEEEH
T ss_pred CCCCCCCcCCeEEecH
Confidence 9999999999999997
No 44
>1pxv_A Cysteine protease; hydrolase; 1.80A {Staphylococcus aureus} SCOP: d.3.1.1 PDB: 1y4h_A
Probab=97.55 E-value=0.0022 Score=55.21 Aligned_cols=132 Identities=12% Similarity=0.095 Sum_probs=92.4
Q ss_pred cCCccCchhhhhhHHHHHHHHHHhc--------CCceecCHHHHhhhcCCCCCCCCCCCchHHHHHHHHHcCCCCCCCCC
Q psy3960 151 DQSVCGSCWSFGTTGAVEGAYYMKH--------KKLAVLSQQALIDCSWGYGNNGCDGGEDFRSYQWIMKHGLPTQDDYG 222 (351)
Q Consensus 151 dQg~cGSCWAfA~~~alE~~~~~~~--------g~~~~LS~q~l~dc~~~~~~~gC~GG~~~~a~~~l~~~Gi~~e~~y~ 222 (351)
.||.-+-|-+|+.++.|........ -....+|+|+|.+ .|..+...++|++..|-... +
T Consensus 26 TQg~~~WCa~Y~~aAilN~~~nt~~~nA~~iMr~~yPN~s~~~l~~----------t~~~~~q~Iky~~s~G~~~~--~- 92 (183)
T 1pxv_A 26 QQFDNSWAAGFSMAALLNATKNTDTYNAHDIMRTLYPEVSEQDLPN----------CATFPNQMIEYGKSQGRDIH--Y- 92 (183)
T ss_dssp CCCSSSCHHHHHHHHHHHHHHTCSCCCHHHHHHHHSTTSCTTTGGG----------CCBCHHHHHHHHHHTTCCCE--E-
T ss_pred ccCcCchHHHHHHHHHHHhhhccCcCCHHHHHHHHCCCCChhHHhh----------cCCCHHHHHHHHHHcCcChh--H-
Confidence 6999999999999998877652111 0123455555554 36678899999987664311 1
Q ss_pred CCCCCCCccccCCCCceeeEeeEEEecCCCHHHHHHHHHcCCCEEEEEEcCccccccccCcEEecCCCCCCCCCCCeEEE
Q psy3960 223 PYLGQDAYCHIANTTATATMTGFVNVTPNSEDALKLALAKHGPVSVAIDASQKSFSFYVNGVYYDEKCNNSPDGLDHAVL 302 (351)
Q Consensus 223 PY~~~~~~C~~~~~~~~~~i~~y~~v~~~~~~~ik~aL~~~GPV~v~i~~~~~~f~~y~~Giy~~~~~~~~~~~~~HaV~ 302 (351)
.+- .-+.+++|+.|.++-||.+...-. +. +......+||++
T Consensus 93 -----------------------~nr-~ls~neV~~~i~~Nk~I~v~~~~v-----------~e----~~~~~~~gHA~a 133 (183)
T 1pxv_A 93 -----------------------QEG-VPSYNQVDQLTKDNVGIMILAQSV-----------SQ----NPNDPHLGHALA 133 (183)
T ss_dssp -----------------------EES-CCCHHHHHHHHHTTCCEEEEEECC-----------CS----STTSCCCEEEEE
T ss_pred -----------------------hcC-CCCHHHHHHHHhcCCcEEEEcccc-----------cc----CCCCccCceeEE
Confidence 110 125889999999999999887532 11 111226799999
Q ss_pred EEEEeeeCCeeEEEEEcCCCCCCCCCcEEEEEecCCe
Q psy3960 303 AVGYGELDGKPYWQVKNSWSTYWGNQGYVLMSIKDNN 339 (351)
Q Consensus 303 iVGyg~~~g~~ywivkNSWG~~WG~~GY~~Is~~~n~ 339 (351)
||||-..++.++.+|-|=| ++|++-++.+.+.
T Consensus 134 v~Gya~~~~~~~y~~WNPW-----~~~~~~~~a~S~~ 165 (183)
T 1pxv_A 134 VVGNAKINDQEKLIYWNPW-----DTELSIQDADSSL 165 (183)
T ss_dssp EEEEEEETTEEEEEEECTT-----CSSCEEEETTCCE
T ss_pred EEeeeecCCCeEEEEeCCc-----cCCcEeecCCCCe
Confidence 9999998899999999988 3488888877553
No 45
>1x9y_A Cysteine proteinase; half-barrel, barrel-sandwich-hybrid, hydrolase; 2.50A {Staphylococcus aureus} SCOP: d.3.1.1 d.17.1.4
Probab=97.31 E-value=0.004 Score=58.91 Aligned_cols=132 Identities=12% Similarity=0.097 Sum_probs=90.0
Q ss_pred cCCccCchhhhhhHHHHHHHHHHhc--------CCceecCHHHHhhhcCCCCCCCCCCCchHHHHHHHHHcCCCCCCCCC
Q psy3960 151 DQSVCGSCWSFGTTGAVEGAYYMKH--------KKLAVLSQQALIDCSWGYGNNGCDGGEDFRSYQWIMKHGLPTQDDYG 222 (351)
Q Consensus 151 dQg~cGSCWAfA~~~alE~~~~~~~--------g~~~~LS~q~l~dc~~~~~~~gC~GG~~~~a~~~l~~~Gi~~e~~y~ 222 (351)
-||.-+-|-+||.+++|........ .....+|+++|.+ .|..+...++|++..|..
T Consensus 202 TQg~~pWCa~Ya~aailN~~~~t~~~nA~~iMr~~yPN~S~~~l~~----------ts~~~~q~Iky~qsyG~~------ 265 (367)
T 1x9y_A 202 QQFDNSWCAGFSMAALLNATKNTDTYNAHDIMRTLYPEVSEQDLPN----------CATFPNQMIEYGKSQGRD------ 265 (367)
T ss_dssp CCSSSSCHHHHHHHHHHHHHTTCSCCCHHHHHHHHCTTSCTTTGGG----------CCCCHHHHHHHHHHTTEE------
T ss_pred ccCCCchHHHHHHHHHHHhhhccCcCCHHHHHHHHCCCCChhHHhh----------cCCCHHHHHHHHHHhCcc------
Confidence 7999999999999998866542110 0123445555544 366788999999865542
Q ss_pred CCCCCCCccccCCCCceeeEeeEEEecCCCHHHHHHHHHcCCCEEEEEEcCccccccccCcEEecCCCCCCCCCCCeEEE
Q psy3960 223 PYLGQDAYCHIANTTATATMTGFVNVTPNSEDALKLALAKHGPVSVAIDASQKSFSFYVNGVYYDEKCNNSPDGLDHAVL 302 (351)
Q Consensus 223 PY~~~~~~C~~~~~~~~~~i~~y~~v~~~~~~~ik~aL~~~GPV~v~i~~~~~~f~~y~~Giy~~~~~~~~~~~~~HaV~ 302 (351)
+.-.... -+.+.+++.+.++-||++......+. ......+|||+
T Consensus 266 -------------------~~~~n~~--ls~deVk~~id~Nk~I~v~~~~v~~~---------------~n~~~~gHAla 309 (367)
T 1x9y_A 266 -------------------IHYQEGV--PSYNQVDQLTKDNVGIMILAQSVSQN---------------PNDPHLGHALA 309 (367)
T ss_dssp -------------------EEEEESC--CCHHHHHHHHHTTCCEEEEEEETTSC---------------SSSCCCSEEEE
T ss_pred -------------------hhhhcCC--CCHHHHHHHHhcCCcEEEEccccccC---------------CCCccCceeEE
Confidence 1111112 25789999999999999888654111 01125799999
Q ss_pred EEEEeeeCCeeEEEEEcCCCCCCCCCcEEEEEecCCe
Q psy3960 303 AVGYGELDGKPYWQVKNSWSTYWGNQGYVLMSIKDNN 339 (351)
Q Consensus 303 iVGyg~~~g~~ywivkNSWG~~WG~~GY~~Is~~~n~ 339 (351)
||||-..++.+|.++-|=| | ++++-++...+.
T Consensus 310 vvGyA~~~~~~~y~~WNPW---~--~~~~~~sa~S~~ 341 (367)
T 1x9y_A 310 VVGNAKINDQEKLIYWNPW---D--TELSIQDADSSL 341 (367)
T ss_dssp EEEEEEETTEEEEEEECTT---C--SSCEEEETTCCE
T ss_pred EEeccccCCCcEEEEecCc---c--CCceeecCCCCe
Confidence 9999887888999998888 3 457887775543
No 46
>1cv8_A Staphopain; cysteine protease, thiol protease, papain family; HET: E64; 1.75A {Staphylococcus aureus} SCOP: d.3.1.1
Probab=97.10 E-value=0.028 Score=48.12 Aligned_cols=131 Identities=16% Similarity=0.203 Sum_probs=92.2
Q ss_pred cCCccCchhhhhhHHHHHHHHHHhc--------CCceecCHHHHhhhcCCCCCCCCCCCchHHHHHHHHHcCCCCCCCCC
Q psy3960 151 DQSVCGSCWSFGTTGAVEGAYYMKH--------KKLAVLSQQALIDCSWGYGNNGCDGGEDFRSYQWIMKHGLPTQDDYG 222 (351)
Q Consensus 151 dQg~cGSCWAfA~~~alE~~~~~~~--------g~~~~LS~q~l~dc~~~~~~~gC~GG~~~~a~~~l~~~Gi~~e~~y~ 222 (351)
-||.-+-|-+|+.+++|........ .....+|+++|..+ |..+...++|++..|-.. ++
T Consensus 17 TQg~~pWCa~Ya~aailN~~~~~~~~~A~~imr~~yPn~S~~~l~~~----------~~t~~e~iky~~s~g~~~--~~- 83 (174)
T 1cv8_A 17 TQGNNGWCAGYTMSALLNATYNTNKYHAEAVMRFLHPNLQGQQFQFT----------GLTPREMIYFGQTQGRSP--QL- 83 (174)
T ss_dssp CCCSSSCHHHHHHHHHHHHHHTCCCCCHHHHHHHHCSSCCHHHHHHC----------CCCHHHHHHHHHHTTCCC--EE-
T ss_pred ccCCCchHHHHHHHHHHHhhhccCcCCHHHHHHHHCCCCCHHHHhhc----------CCCHHHHHHHHHHcCCCh--hh-
Confidence 6999999999999999877662211 12457888888854 456788999988765410 11
Q ss_pred CCCCCCCccccCCCCceeeEeeEEEecCCCHHHHHHHHHcCCCEEEEEEcCccccccccCcEEecCCCCCCCCCCCeEEE
Q psy3960 223 PYLGQDAYCHIANTTATATMTGFVNVTPNSEDALKLALAKHGPVSVAIDASQKSFSFYVNGVYYDEKCNNSPDGLDHAVL 302 (351)
Q Consensus 223 PY~~~~~~C~~~~~~~~~~i~~y~~v~~~~~~~ik~aL~~~GPV~v~i~~~~~~f~~y~~Giy~~~~~~~~~~~~~HaV~ 302 (351)
.+ ..-+.+++|+++.++-|+.+..+-. + ... ....+||++
T Consensus 84 -----------------------~n-~~ls~~eV~~~~~~nk~i~i~~~~v-e----~~~-----------~~~~gHAla 123 (174)
T 1cv8_A 84 -----------------------LN-RMTTYNEVDNLTKNNKGIAILGSRV-E----SRN-----------GMHAGHAMA 123 (174)
T ss_dssp -----------------------ES-SCCCHHHHHHHHHTTCCEEEEEEES-S----CBT-----------TBCCEEEEE
T ss_pred -----------------------hc-CCCCHHHHHHHHhcCCceEEEcccc-c----CCC-----------CCCCceeEE
Confidence 00 0125789999999999998877532 1 111 115789999
Q ss_pred EEEEeee-CCeeEEEEEcCCCCCCCCCcEEEEEecCCe
Q psy3960 303 AVGYGEL-DGKPYWQVKNSWSTYWGNQGYVLMSIKDNN 339 (351)
Q Consensus 303 iVGyg~~-~g~~ywivkNSWG~~WG~~GY~~Is~~~n~ 339 (351)
||||-.. +|.++.++-|=| +++.+-++.+.+.
T Consensus 124 v~Gy~~~~ng~~~y~~WNPW-----~~~~~~~s~~s~~ 156 (174)
T 1cv8_A 124 VVGNAKLNNGQEVIIIWNPW-----DNGFMTQDAKNNV 156 (174)
T ss_dssp EEEEEEETTSCEEEEEECTT-----CSSCEEEETTCCE
T ss_pred EEeeeeecCCceEEEEeCCc-----cCCcEEecCCCCe
Confidence 9999985 778999999988 3567777776543
No 47
>3erv_A Putative C39-like peptidase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.10A {Bacillus anthracis}
Probab=90.44 E-value=0.61 Score=42.09 Aligned_cols=66 Identities=21% Similarity=0.299 Sum_probs=42.3
Q ss_pred EEEecCCCHHHHHHHHHcCCCEEEEEEcCcc-----ccccc--cCcEEecCCCCCCCCCCCeEEEEEEEeeeCCeeEEEE
Q psy3960 245 FVNVTPNSEDALKLALAKHGPVSVAIDASQK-----SFSFY--VNGVYYDEKCNNSPDGLDHAVLAVGYGELDGKPYWQV 317 (351)
Q Consensus 245 y~~v~~~~~~~ik~aL~~~GPV~v~i~~~~~-----~f~~y--~~Giy~~~~~~~~~~~~~HaV~iVGyg~~~g~~ywiv 317 (351)
...++..+.++|+.+|.++-||.|-+...-+ .|..+ .+|-... ....|+|+|+||++ +..+|
T Consensus 124 ~~dltG~sl~~L~~~I~~G~PVIv~~t~~~~p~~~~~~~~W~~~~G~~~~-------~~~~H~VVl~GYd~----~~vyi 192 (236)
T 3erv_A 124 AVDLTGKSIEELYKSVKAGQPVVIITNATFAPLDEDEFTTWETNNGDVSI-------TYNEHCVVLIGYDQ----ESVYI 192 (236)
T ss_dssp EEECTTSCHHHHHHHHHTTCCEEEEEETTSSCCCGGGCEEEEETTEEEEE-------CTTEEEEEEEEECS----SEEEE
T ss_pred eeecCCCCHHHHHHHHHCCCeEEEEEeCCcccccccccceeecCCCceee-------ccCCeEEEEEEEeC----CEEEE
Confidence 3456667899999999999999998754310 11111 1233211 13579999999996 24455
Q ss_pred EcCC
Q psy3960 318 KNSW 321 (351)
Q Consensus 318 kNSW 321 (351)
.+.+
T Consensus 193 ~DP~ 196 (236)
T 3erv_A 193 RDPL 196 (236)
T ss_dssp ECTT
T ss_pred ECCC
Confidence 5554
No 48
>4d8b_A Streptopain; papain fold, cysteine protease, secreted, hydrolase; 1.06A {Streptococcus pyogenes} PDB: 4d8e_A* 4d8i_A* 2uzj_A* 2jtc_A
Probab=80.15 E-value=2.1 Score=39.13 Aligned_cols=54 Identities=22% Similarity=0.498 Sum_probs=40.8
Q ss_pred HHHHHHHHHcCCCEEEEEEcCccccccccCcEEecCCCCCCCCCCCeEEEEEEEeeeCCeeEEEEEcCCCCCCC--CCcE
Q psy3960 253 EDALKLALAKHGPVSVAIDASQKSFSFYVNGVYYDEKCNNSPDGLDHAVLAVGYGELDGKPYWQVKNSWSTYWG--NQGY 330 (351)
Q Consensus 253 ~~~ik~aL~~~GPV~v~i~~~~~~f~~y~~Giy~~~~~~~~~~~~~HaV~iVGyg~~~g~~ywivkNSWG~~WG--~~GY 330 (351)
.+.|+.+|.++.||.++-.- . .++||.+|=||+. ++|+-| -|| || .+||
T Consensus 171 ~~~I~~eL~~grPV~~~G~~--------------------~--~gGHAwViDGY~~---~~~~H~--NwG--WgG~~nGY 221 (261)
T 4d8b_A 171 EAQIDKELSQNQPVYYQGVG--------------------K--VGGHAFVIDGADG---RNFYHV--NWG--WGGVSDGF 221 (261)
T ss_dssp HHHHHHHHHTTCCEEEEEEE--------------------T--TEEEEEEEEEEES---SSCEEE--ECS--STTTTCEE
T ss_pred HHHHHHHHHcCCCEEEEeec--------------------C--CCceEEEEccccc---CCEEEE--EcC--CCCCCCce
Confidence 36799999999999876520 0 4789999999985 467777 355 44 5899
Q ss_pred EEEEe
Q psy3960 331 VLMSI 335 (351)
Q Consensus 331 ~~Is~ 335 (351)
+.+..
T Consensus 222 y~l~~ 226 (261)
T 4d8b_A 222 FRLDA 226 (261)
T ss_dssp ECTTC
T ss_pred eeccc
Confidence 98875
No 49
>2r9f_A Calpain-1 catalytic subunit; protease, peptidase, inhibitor, alpha-ketoamide, hydrolase, thiol protease; HET: K2Z; 1.60A {Rattus norvegicus} SCOP: d.3.1.3 PDB: 1tlo_A* 2g8e_A* 1tl9_A* 2nqg_A* 2nqi_A* 2r9c_A* 2g8j_A* 1kxr_A 2ary_A 1zcm_A* 1mdw_A
Probab=58.56 E-value=17 Score=34.11 Aligned_cols=76 Identities=18% Similarity=0.245 Sum_probs=46.7
Q ss_pred HHHHHHHHHcCCCEEEEEEcCccccccccCcEEecCCCCCCCCCCCeEEEEEEEeee--C--CeeEEEEEcCCCC-CC--
Q psy3960 253 EDALKLALAKHGPVSVAIDASQKSFSFYVNGVYYDEKCNNSPDGLDHAVLAVGYGEL--D--GKPYWQVKNSWST-YW-- 325 (351)
Q Consensus 253 ~~~ik~aL~~~GPV~v~i~~~~~~f~~y~~Giy~~~~~~~~~~~~~HaV~iVGyg~~--~--g~~ywivkNSWG~-~W-- 325 (351)
-+.|++++.++..+++++.+. .... . .......-..+||-.|++.... . +.....+||-||. .|
T Consensus 210 ~~~l~~~~~~g~l~~~s~~~t-~~~~------~--~~~~~~GLv~~HaYsVl~v~~v~~~~~~~~Lv~LrNPWg~~eW~G 280 (339)
T 2r9f_A 210 YQIILKALERGSLLGCSINIS-DIRD------L--EAITFKNLVRGHAYSVTDAKQVTYQGQRVNLIRMRNPWGEVEWKG 280 (339)
T ss_dssp HHHHHHHHHHTCEEEEECCCS-SSST------T--CSBCTTSCBTTCCEEEEEEEEEEETTEEEEEEEEECTTSCCCCCS
T ss_pred HHHHHHHHHCCCeEEEEecCC-Cccc------h--hhhhccCCcCCceEEEeEEEEEecCCCceEEEEEeCCCCCccccC
Confidence 456788888866666655432 1100 0 0001111246899999999863 2 3468899999995 23
Q ss_pred --C---------------------CCcEEEEEecC
Q psy3960 326 --G---------------------NQGYVLMSIKD 337 (351)
Q Consensus 326 --G---------------------~~GY~~Is~~~ 337 (351)
. ++|-|||+..+
T Consensus 281 ~wsd~s~~W~~~~~~~~~~l~~~~~dG~FWMs~~D 315 (339)
T 2r9f_A 281 PWSDNSYEWNKVDPYEREQLRVKMEDGEFWMSFRD 315 (339)
T ss_dssp TTSTTCGGGGGSCHHHHHHHCCCCCSSEEEEEHHH
T ss_pred CCCcCCccccccCHHHHHHhCCCCCCCEEEEEHHH
Confidence 2 56999999854
No 50
>1ziv_A Calpain 9; cysteine protease, papain, calcium-dependent, thiol protease, structural genomics consortium, SGC, hydrolase; 2.31A {Homo sapiens} SCOP: d.3.1.3 PDB: 2p0r_A*
Probab=58.49 E-value=18 Score=34.03 Aligned_cols=62 Identities=18% Similarity=0.195 Sum_probs=37.2
Q ss_pred HHHHHHHHHcCCCEEEEEEcCccccccccCcEEecCCCCCCCCCCCeEEEEEEEeee----CCeeEEEEEcCCCC
Q psy3960 253 EDALKLALAKHGPVSVAIDASQKSFSFYVNGVYYDEKCNNSPDGLDHAVLAVGYGEL----DGKPYWQVKNSWST 323 (351)
Q Consensus 253 ~~~ik~aL~~~GPV~v~i~~~~~~f~~y~~Giy~~~~~~~~~~~~~HaV~iVGyg~~----~g~~ywivkNSWG~ 323 (351)
-+.|++++.++..+++++.+. ..-. . .......-..+||-.|++.... ++.....+||-||.
T Consensus 209 ~~~l~~~~~~g~l~~~~~~~t-~~~~------~--e~~~~~GLv~~HaYsVl~v~~v~~~~~~~~Lv~LrNPWg~ 274 (339)
T 1ziv_A 209 YEILEKALKRGSLLGCFIDTR-SAAE------S--EARTPFGLIKGHAYSVTGIDQVSFRGQRIELIRIRNPWGQ 274 (339)
T ss_dssp HHHHHHHHHHTCEEEEECCCS-SGGG------T--TCBCTTSCBTTCCEEEEEEEEEEETTEEEEEEEEECCSSC
T ss_pred HHHHHHHHhCCCeEEEEeccC-Cccc------h--hhhhccCcccCeeEEEeEEEEEecCCCceEEEEecCCCCC
Confidence 366788888766666655432 1100 0 0011111246899999999754 34568899999996
No 51
>2nqa_A Calpain 8; calpain, calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC; HET: AR7; 2.20A {Homo sapiens}
Probab=55.53 E-value=23 Score=33.10 Aligned_cols=62 Identities=18% Similarity=0.246 Sum_probs=36.3
Q ss_pred HHHHHHHHHcCCCEEEEEEcCccccccccCcEEecCCCCCCCCCCCeEEEEEEEeee--C--CeeEEEEEcCCCC
Q psy3960 253 EDALKLALAKHGPVSVAIDASQKSFSFYVNGVYYDEKCNNSPDGLDHAVLAVGYGEL--D--GKPYWQVKNSWST 323 (351)
Q Consensus 253 ~~~ik~aL~~~GPV~v~i~~~~~~f~~y~~Giy~~~~~~~~~~~~~HaV~iVGyg~~--~--g~~ywivkNSWG~ 323 (351)
-+.|++++.++-.+++++... +... . .......-..+||-.|++.... . +.....+||-||.
T Consensus 205 ~~~l~~~~~~g~l~~~~~~~~-~~~~---~-----~~~~~~GLv~~HaYsVl~v~~v~~~~~~~~lv~lrNPWg~ 270 (326)
T 2nqa_A 205 YQIIRKALCAGSLLGCSIDVY-SAAE---A-----EAITSQKLVKSHAYSVTGVEEVNFQGHPEKLIRLRNPWGE 270 (326)
T ss_dssp HHHHHHHHHTTCEEEEECCCS-SGGG---T-----TCBCTTSCBSSCCEEEEEEEEEEETTEEEEEEEEECTTCC
T ss_pred HHHHHHHHhCCCceEEeecCC-Cccc---c-----hhhhccCCccCceEEEEEEEEEecCCCceEEEEecCCCcC
Confidence 356777787765666655432 1110 0 0011111246899999999853 2 2467899999995
No 52
>1dki_A Pyrogenic exotoxin B zymogen; cysteine protease, papain-like; 1.60A {Streptococcus pyogenes} SCOP: d.3.1.1 PDB: 1pvj_A*
Probab=54.66 E-value=22 Score=33.99 Aligned_cols=56 Identities=18% Similarity=0.325 Sum_probs=39.9
Q ss_pred HHHHHHHHHcCCCEEEEEEcCccccccccCcEEecCCCCCCCCCCCeEEEEEEEeeeCCeeEEEEEcCCCCCCCCCcEEE
Q psy3960 253 EDALKLALAKHGPVSVAIDASQKSFSFYVNGVYYDEKCNNSPDGLDHAVLAVGYGELDGKPYWQVKNSWSTYWGNQGYVL 332 (351)
Q Consensus 253 ~~~ik~aL~~~GPV~v~i~~~~~~f~~y~~Giy~~~~~~~~~~~~~HaV~iVGyg~~~g~~ywivkNSWG~~WG~~GY~~ 332 (351)
.+.|+..|.++.||...-.-. .++||.++=||+. .+||-|==.||-. .+||+.
T Consensus 289 ~~~i~~eL~~~rPV~~~G~~~----------------------~gGHAfV~DGy~~---~~~~H~NwGWgG~--~nGyy~ 341 (371)
T 1dki_A 289 EAQIDKELSQNQPVYYQGVGK----------------------VGGHAFVIDGADG---RNFYHVNWGWGGV--SDGFFR 341 (371)
T ss_dssp HHHHHHHHHTTCCEEEEEEET----------------------TEEEEEEEEEECS---SSEEEEECSSTTT--TCEEEE
T ss_pred HHHHHHHHHcCCCEEEEeecC----------------------CCceEEEECcccC---CCeEEEEeCcCCC--CCccee
Confidence 356899999999997543110 2689999999985 5688883334422 589999
Q ss_pred EEe
Q psy3960 333 MSI 335 (351)
Q Consensus 333 Is~ 335 (351)
+..
T Consensus 342 l~~ 344 (371)
T 1dki_A 342 LDA 344 (371)
T ss_dssp SCC
T ss_pred ccC
Confidence 875
No 53
>3bb7_A Interpain A; cysteine protease, zymogen activation, bacterial odontopatho hydrolase; 1.50A {Prevotella intermedia} PDB: 3bba_A
Probab=44.21 E-value=38 Score=31.61 Aligned_cols=60 Identities=20% Similarity=0.284 Sum_probs=40.0
Q ss_pred HHHHHHHHcCCCEEEEEEcCccccccccCcEEecCCCCCCCCCCCeEEEEEEEeeeCCeeEEEEEcCCCCCCCCCcEEEE
Q psy3960 254 DALKLALAKHGPVSVAIDASQKSFSFYVNGVYYDEKCNNSPDGLDHAVLAVGYGELDGKPYWQVKNSWSTYWGNQGYVLM 333 (351)
Q Consensus 254 ~~ik~aL~~~GPV~v~i~~~~~~f~~y~~Giy~~~~~~~~~~~~~HaV~iVGyg~~~g~~ywivkNSWG~~WG~~GY~~I 333 (351)
+.|+..|.++.||...-.-. . +.. ..++||.++=||+. ++||-+==.||-. .+||+.+
T Consensus 239 ~~i~~eL~~~rPV~~~G~~~--~------~~~---------~~~GHafV~DGY~~---~~~~H~NwGWgG~--~nGyy~l 296 (321)
T 3bb7_A 239 DIVFSELTKGHPLIYGGVSP--G------SMG---------QDAGHAFVIDGYNK---AGLVSVNWGWNGD--VDGYYKI 296 (321)
T ss_dssp HHHHHHHHTTCCEEEEEC------------------------CCCEEEEEEEECT---TSCEEEECSSTTT--TCEEECC
T ss_pred HHHHHHHHhCCCEEEEEecC--C------CCC---------CCCceEEEEccccC---CCeEEEecCCCCC--CCceEec
Confidence 47899999999987654211 1 110 15799999999986 4788884444422 3899988
Q ss_pred Ee
Q psy3960 334 SI 335 (351)
Q Consensus 334 s~ 335 (351)
..
T Consensus 297 ~~ 298 (321)
T 3bb7_A 297 DL 298 (321)
T ss_dssp TT
T ss_pred cC
Confidence 64
No 54
>3m4w_A Sigma-E factor regulatory protein RSEB; RSEA, RSEB, RSEP, stress response, sigma factor, periplasm, membrane, transmembrane; 2.30A {Escherichia coli} PDB: 2p4b_A 2v43_A 2v42_A
Probab=43.75 E-value=62 Score=29.68 Aligned_cols=110 Identities=15% Similarity=0.286 Sum_probs=72.4
Q ss_pred eeEEeeeccccceeeeecccccCCCCCCcCC----cccccCCCCceeceeeeeccCccccc--hhhh--hccccccccee
Q psy3960 30 SLKVAPMTTETELNKISCFHAYGIPDATIEP----QSVLPDVSDFKVNIYRLFFLRPRFHE--NEKI--RYNWTYIGEEL 101 (351)
Q Consensus 30 ~~~~~p~~~~~~~~~~~c~~~~g~~~~~~~~----~~~~p~~~~f~~~~~~~~~~~~~~~~--~~~~--~~~~~~~~~~~ 101 (351)
+++|.....+... ...=.+++|..++.|+- .-+.|+..-|..+-.+..-..|.+-. -..+ .++.+.+|.+.
T Consensus 34 s~ri~H~~~~~~~-~e~L~~LdG~~reviR~~~~v~~~~p~~~~~~~~~~~~~~~~p~~l~~~~~~l~~~Y~~~~~g~er 112 (295)
T 3m4w_A 34 SLRYRHARLDNRP-LAQLLQMDGPRREVVQRGNEISYFEPGLEPFTLNGDYIVDSLPSLIYTDFKRLSPYYDFISVGRTR 112 (295)
T ss_dssp EEEEEEEECSSSE-EEEEEECSSSCCEEEEETTEEEEECTTSCCEEEECSSCTTSSCGGGGCCHHHHTTTEEEEEEEEEE
T ss_pred EEEEEEEeeCCEE-EEEEEEcCCCcEEEEEECCEEEEEcCCCceEEEecccccccCccccccChhHHhhCceEEEcCceE
Confidence 4566655554432 34446678888777743 34679988888666665544555322 1233 35667789999
Q ss_pred ecCeeccceeeccccCcccceeEEEEEccCCCCCCcCcceeecC
Q psy3960 102 VNGIILEKWRLVTSEGEKVSKYSLWVRYNKASKDAIPVRYEMKG 145 (351)
Q Consensus 102 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~plP~~~d~r~ 145 (351)
++|..|...+..-... ....|.+|++.... +|++.++-+
T Consensus 113 VaGr~~~vv~l~PkD~-~ry~y~lWiD~et~----lpLk~e~~d 151 (295)
T 3m4w_A 113 IADRLCEVIRVVARDG-TRYSYIVWMDTESK----LPMRVDLLD 151 (295)
T ss_dssp ETTEEEEEEEEEETTS-CSCEEEEEEETTTC----CEEEEEEEC
T ss_pred ECCeEEEEEEEEECCC-CceeEEEEEEccCC----CEEEEEEEc
Confidence 9999998888766544 33568999987655 888877754
No 55
>3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L
Probab=36.63 E-value=54 Score=33.88 Aligned_cols=76 Identities=24% Similarity=0.363 Sum_probs=45.1
Q ss_pred HHHHHHHHHcCCCEEEEEEcCccccccccCcEEecCCCCCCCCCCCeEEEEEEEeee--CC--eeEEEEEcCCCC-CC--
Q psy3960 253 EDALKLALAKHGPVSVAIDASQKSFSFYVNGVYYDEKCNNSPDGLDHAVLAVGYGEL--DG--KPYWQVKNSWST-YW-- 325 (351)
Q Consensus 253 ~~~ik~aL~~~GPV~v~i~~~~~~f~~y~~Giy~~~~~~~~~~~~~HaV~iVGyg~~--~g--~~ywivkNSWG~-~W-- 325 (351)
-+.|++++.++.++++++.+.+ . +-. .......-..+||-.|++...- .+ ...-.+||-||. .|
T Consensus 225 ~~~l~~~~~~g~l~~~~~~~~~-~------~~~--~~~~~~GL~~~HaYsvl~~~~v~~~~~~~~lv~lrNPWg~~ew~G 295 (714)
T 3bow_A 225 FKIIQKALEKGSLLGCSIDITS-A------ADS--EAVTYQKLVKGHAYSVTGAEEVESSGSLQKLIRIRNPWGQVEWTG 295 (714)
T ss_dssp HHHHHHHHHTTCEEEEECCSTT-S------CTT--CCBCTTSCBTTSCEEEEEEEEEEETTEEEEEEEEECTTSCCCCCS
T ss_pred HHHHHHHHhCCCeEEEEcccCC-c------ccc--cchhcCCCcCCceEEEeeeEEeecCCCceEEEEEECCCCCcccCC
Confidence 3567777777656655553321 0 000 0011111246899999998853 23 456779999995 22
Q ss_pred --C---------------------CCcEEEEEecC
Q psy3960 326 --G---------------------NQGYVLMSIKD 337 (351)
Q Consensus 326 --G---------------------~~GY~~Is~~~ 337 (351)
. ++|-|||+..+
T Consensus 296 ~wsd~s~~W~~~~~~~~~~l~~~~~dg~FWm~~~d 330 (714)
T 3bow_A 296 KWNDNCPSWNTVDPEVRANLTERQEDGEFWMSFSD 330 (714)
T ss_dssp TTSTTCGGGGGSCHHHHHHHCCCCCSSEEEEEHHH
T ss_pred CCCCCCccccccCHHHHHHhCCCCCCCeEEEEhHH
Confidence 2 57999999854
No 56
>1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3
Probab=23.96 E-value=61 Score=34.30 Aligned_cols=76 Identities=17% Similarity=0.212 Sum_probs=43.0
Q ss_pred HHHHHHHHHcCCCEEEEEEcCccccccccCcEEecCCCCCCCCCCCeEEEEEEEeee----CCeeEEEEEcCCCC-----
Q psy3960 253 EDALKLALAKHGPVSVAIDASQKSFSFYVNGVYYDEKCNNSPDGLDHAVLAVGYGEL----DGKPYWQVKNSWST----- 323 (351)
Q Consensus 253 ~~~ik~aL~~~GPV~v~i~~~~~~f~~y~~Giy~~~~~~~~~~~~~HaV~iVGyg~~----~g~~ywivkNSWG~----- 323 (351)
.+.|++++.++.++++++.+. .. +... ......-..+||-.|++.... .+...-.+||-||.
T Consensus 225 ~~~l~~~~~~~~~~~~~~~~~-~~------~~~~--~~~~~gl~~~haY~v~~~~~~~~~~~~~~lv~lrNPwg~~ew~G 295 (900)
T 1qxp_A 225 YQIILKALERGSLLGCSINIS-DI------RDLE--AITFKNLVRGHAYSVTDAKQVTYQGQRVNLIRMRNPWGEVEWKG 295 (900)
T ss_dssp HHHHHHHHTTTCEEEEECCC------------------CCCCC---CCCEEEEEEECCCSSSCCEEEEEECTTCCCCCSC
T ss_pred HHHHHHHHhCCCEEEEEecCC-Cc------cccc--hhhcCCCCCCceEEEeEEEEEecCCCceEEEEEeCCCCCCCcCC
Confidence 456777777766666655432 10 1000 011111246899999999864 23567899999994
Q ss_pred -------CCC--------------CCcEEEEEecC
Q psy3960 324 -------YWG--------------NQGYVLMSIKD 337 (351)
Q Consensus 324 -------~WG--------------~~GY~~Is~~~ 337 (351)
.|- ++|-|||+..+
T Consensus 296 ~wsd~s~~W~~~~~~~~~~l~~~~~dg~Fwm~~~d 330 (900)
T 1qxp_A 296 PWSDNSYEWNKVDPYEREQLRVKMEDGEFWMSFRD 330 (900)
T ss_dssp SCC-CCSCSSSSCCTHHHHTTCCCCSSCCCCBSTT
T ss_pred CCCCCCcccccCCHHHHHHhCCCCCCCeEEeEHHH
Confidence 231 46999999965
Done!