Query psy3963
Match_columns 128
No_of_seqs 160 out of 276
Neff 5.6
Searched_HMMs 29240
Date Fri Aug 16 21:49:11 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3963.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/3963hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3l2n_A Peptidase M14, carboxyp 97.7 1.4E-05 4.7E-10 66.8 2.5 75 32-110 222-297 (395)
2 4a37_A Metallo-carboxypeptidas 97.5 2.9E-05 9.8E-10 64.5 2.4 73 32-108 217-290 (388)
3 3k2k_A Putative carboxypeptida 97.5 2.9E-05 1E-09 65.0 2.5 76 32-111 231-307 (403)
4 3l2n_A Peptidase M14, carboxyp 96.7 0.0011 3.8E-08 55.2 3.8 76 2-81 308-391 (395)
5 3k2k_A Putative carboxypeptida 95.2 0.015 5.1E-07 48.5 4.0 76 2-81 317-400 (403)
6 2qvp_A Uncharacterized protein 93.9 0.025 8.6E-07 44.1 2.2 57 50-107 121-185 (275)
7 4a37_A Metallo-carboxypeptidas 93.1 0.085 2.9E-06 43.6 4.3 64 17-81 314-385 (388)
8 1dtd_A Carboxypeptidase A2; ca 92.5 0.14 4.8E-06 40.3 4.6 34 65-103 166-199 (303)
9 1h8l_A Carboxypeptidase GP180 91.3 0.1 3.4E-06 42.5 2.5 55 47-106 132-192 (380)
10 3prt_A Carboxypeptidase T; hyd 90.5 0.21 7.1E-06 39.8 3.7 37 65-104 175-214 (323)
11 1z5r_A Procarboxypeptidase B; 90.3 0.22 7.5E-06 39.2 3.6 38 64-105 168-207 (306)
12 2c1c_A Carboxypeptidase B; ins 89.0 0.31 1.1E-05 38.4 3.6 54 48-105 132-206 (312)
13 1aye_A PCPA2, procarboxypeptid 88.7 0.36 1.2E-05 39.8 3.9 33 65-102 264-296 (401)
14 3d4u_A Tafia, carboxypeptidase 88.5 0.36 1.2E-05 37.9 3.6 37 65-105 171-209 (309)
15 1jqg_A Carboxypeptidase A; Pro 88.1 0.37 1.3E-05 40.2 3.6 38 64-105 280-317 (433)
16 3mn8_A LP15968P; catalytic dom 87.4 0.43 1.5E-05 39.8 3.6 56 47-108 165-231 (435)
17 1kwm_A Procarboxypeptidase B; 86.9 0.48 1.6E-05 39.0 3.6 35 64-102 263-297 (402)
18 1m4l_A Carboxypeptidase A; met 86.7 0.51 1.7E-05 37.2 3.5 34 65-103 172-205 (307)
19 2bo9_A Carboxypeptidase A4; me 86.4 0.52 1.8E-05 37.0 3.4 36 65-105 171-208 (308)
20 3b2y_A Metallopeptidase contai 85.5 0.22 7.6E-06 39.0 0.8 56 49-107 121-186 (275)
21 2boa_A Carboxypeptidase A4; me 85.4 0.59 2E-05 38.5 3.4 37 65-106 267-305 (404)
22 1uwy_A Carboxypeptidase M; met 85.0 0.53 1.8E-05 39.0 3.0 45 48-96 128-178 (426)
23 2nsm_A Carboxypeptidase N cata 83.1 0.74 2.5E-05 38.2 3.0 36 65-106 174-211 (439)
24 3dgv_A TAFI, carboxypeptidase 76.8 1.9 6.6E-05 35.6 3.6 34 65-102 263-296 (401)
25 1pca_A Procarboxypeptidase A P 76.7 0.51 1.7E-05 39.0 0.0 29 65-95 267-295 (403)
26 3v38_A Carboxypeptidase T; hyd 65.1 3.1 0.00011 33.3 2.2 39 65-106 175-216 (326)
27 1dtd_A Carboxypeptidase A2; ca 43.6 28 0.00095 26.9 4.4 40 38-79 255-294 (303)
28 1m4l_A Carboxypeptidase A; met 39.9 36 0.0012 26.4 4.5 41 37-79 260-300 (307)
29 1vq8_P 50S ribosomal protein L 39.3 15 0.00051 26.8 2.0 48 48-95 12-60 (149)
30 1z5r_A Procarboxypeptidase B; 36.4 46 0.0016 25.6 4.6 41 38-80 259-299 (306)
31 3d4u_A Tafia, carboxypeptidase 35.5 49 0.0017 25.5 4.6 41 38-80 262-302 (309)
32 1aye_A PCPA2, procarboxypeptid 34.4 46 0.0016 27.1 4.5 40 38-79 353-392 (401)
33 2ehp_A AQ_1627 protein; putati 33.0 60 0.002 22.6 4.2 36 41-77 2-37 (126)
34 2c1c_A Carboxypeptidase B; ins 28.7 58 0.002 25.1 4.0 40 38-79 262-303 (312)
35 3cdx_A Succinylglutamatedesucc 27.7 37 0.0013 27.0 2.8 45 51-96 110-154 (354)
36 4hhu_A OR280; engineered prote 26.2 41 0.0014 24.2 2.4 44 36-81 67-110 (170)
37 1kwm_A Procarboxypeptidase B; 26.0 73 0.0025 25.8 4.3 41 38-80 354-394 (402)
38 2ds5_A CLPX, ATP-dependent CLP 24.9 24 0.00082 21.1 0.9 13 45-57 11-23 (51)
39 2zkr_p 60S ribosomal protein L 24.8 22 0.00077 27.0 0.9 49 47-95 11-60 (196)
40 1ovx_A ATP-dependent CLP prote 21.9 28 0.00094 22.1 0.8 14 45-58 18-31 (67)
41 2bo9_A Carboxypeptidase A4; me 21.8 1.2E+02 0.0041 23.2 4.6 40 38-79 260-299 (308)
42 3jyw_P 60S ribosomal protein L 20.5 31 0.001 25.8 0.9 48 48-95 11-59 (176)
43 2qj8_A MLR6093 protein; struct 20.3 47 0.0016 26.0 2.0 44 51-95 102-145 (332)
No 1
>3l2n_A Peptidase M14, carboxypeptidase A; putative carboxypeptidase A, structural genomics, joint CENT structural genomics, JCSG; 2.39A {Shewanella denitrificans}
Probab=97.69 E-value=1.4e-05 Score=66.80 Aligned_cols=75 Identities=17% Similarity=0.270 Sum_probs=57.4
Q ss_pred EEEeeeecceeeeeeeccccccccCC-ccccchhHHHHHHHHHHHHHHHhcCCCeEEEecCCCCCccceeEeccCCCCCc
Q psy3963 32 ITIWREYGVVRSYTMESTYCGFDQGS-FKIGTKESMKIVRGLIEFCTRVLKKTPYFYCDFHGHSLKKNIFLYGCSSQESW 110 (128)
Q Consensus 32 V~~~~~~gi~~syTlE~Sf~G~dlg~-~kf~~kdL~pigk~L~e~l~~ll~~~~~~y~D~HGHSrk~N~F~yGc~~~~~~ 110 (128)
|.+.+..|+..+. -.++..|.|+|+ |.-+....+|.++++.+++.+. .+.+|+|+|++|+..+.|+|||.....|
T Consensus 222 vP~~NPDG~~~~~-~R~n~~GvDLNRnf~g~~~~sepEt~a~~~~l~~~---~~~~~iDlHs~~~~p~~f~~g~~~~p~~ 297 (395)
T 3l2n_A 222 VPNMNPDGSVRGH-LRTNAVGANLNREWQTPSLERSPEVYYVVNKMHET---GVDLFYDVHGDEGLPYVFLAGCEGIPNY 297 (395)
T ss_dssp ESCSCHHHHHTTC-SSCCTTSCCGGGCSSSCCTTTCHHHHHHHHHHHHH---CCSEEEEEEEESSCSSBEEECCTTSTTC
T ss_pred EeccCCchhhhcc-cccccCCCCcccccCCCCcCCCHHHHHHHHHHHhC---CCcEEEEeccCCCCCceEeccccCCCCc
Confidence 5666777776543 367889999996 3333445678899988887653 7999999999999999999999765444
No 2
>4a37_A Metallo-carboxypeptidase; metallo-protease, hydrolase; 1.60A {Pseudomonas aeruginosa} PDB: 4a38_A 4a39_A*
Probab=97.55 E-value=2.9e-05 Score=64.54 Aligned_cols=73 Identities=16% Similarity=0.216 Sum_probs=55.4
Q ss_pred EEEeeeecceeeeeeeccccccccCC-ccccchhHHHHHHHHHHHHHHHhcCCCeEEEecCCCCCccceeEeccCCCC
Q psy3963 32 ITIWREYGVVRSYTMESTYCGFDQGS-FKIGTKESMKIVRGLIEFCTRVLKKTPYFYCDFHGHSLKKNIFLYGCSSQE 108 (128)
Q Consensus 32 V~~~~~~gi~~syTlE~Sf~G~dlg~-~kf~~kdL~pigk~L~e~l~~ll~~~~~~y~D~HGHSrk~N~F~yGc~~~~ 108 (128)
|.+.+..|+..+. -.++..|.|+|+ +..+....+|.++++.+++.+. .+.+|+|+|++++..+.|+|||....
T Consensus 217 vP~~NPDG~~~~~-~R~n~~GvDLNRnf~~~~~~s~pEt~al~~~~~~~---~~~~~iDlHs~~~~p~~~~yg~~~~p 290 (388)
T 4a37_A 217 VPNMNPDGAFHGN-LRTNAAGQDLNRAWLEPSAERSPEVWFVQQEMKRH---GVDLFLDIHGDEEIPHVFAAGCEGNP 290 (388)
T ss_dssp ESCSCHHHHHTTC-SSCCTTSCCGGGCSSSCCTTTCHHHHHHHHHHHHH---CCSEEEEEEEESSCSSCEEECCTTCT
T ss_pred EeccCchHHHhcC-CcccCCCcCCCCCCCCCCcccCHHHHHHHHHHHhc---CCcEEEEeccCCCCCCeEecCCccCC
Confidence 5566666766542 367889999996 3344455678888888887653 69999999999999999999997533
No 3
>3k2k_A Putative carboxypeptidase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; 2.49A {Burkholderia mallei atcc 23344}
Probab=97.55 E-value=2.9e-05 Score=64.96 Aligned_cols=76 Identities=13% Similarity=0.140 Sum_probs=57.3
Q ss_pred EEEeeeecceeeeeeeccccccccCC-ccccchhHHHHHHHHHHHHHHHhcCCCeEEEecCCCCCccceeEeccCCCCCc
Q psy3963 32 ITIWREYGVVRSYTMESTYCGFDQGS-FKIGTKESMKIVRGLIEFCTRVLKKTPYFYCDFHGHSLKKNIFLYGCSSQESW 110 (128)
Q Consensus 32 V~~~~~~gi~~syTlE~Sf~G~dlg~-~kf~~kdL~pigk~L~e~l~~ll~~~~~~y~D~HGHSrk~N~F~yGc~~~~~~ 110 (128)
|.+.+..|+..+. -.++..|.|+|+ +.-+....+|.++++.+++.+. .+.+|+|+|++++..+.|+|||.....|
T Consensus 231 vP~lNPDG~~~~~-~R~n~~GvDLNRnf~~~~~~sepEt~al~~~~~~~---~~~~~iDlHs~~~~P~~f~~g~~~~p~~ 306 (403)
T 3k2k_A 231 VPNMNPDGSVHGN-LRTNAAGANLNREWMEPDAERSPEVLVVRDAIHAI---GCDLFFDIHGDEDLPYVFAAGSEMLPGF 306 (403)
T ss_dssp ESCSCHHHHHTTC-SSCCTTSCCGGGCSSSCCTTTCHHHHHHHHHHHHH---CCSEEEEEEEESSCCSBEEECSTTSTTC
T ss_pred EeccCchHHhhcc-cccCCCCCCcccccccCCcCCCHHHHHHHHHHHhc---CCcEEEEeccCCCCCCccccCcccCCcc
Confidence 5556666666543 367889999996 3334455678889888887653 6999999999999999999999875554
Q ss_pred c
Q psy3963 111 L 111 (128)
Q Consensus 111 ~ 111 (128)
.
T Consensus 307 ~ 307 (403)
T 3k2k_A 307 T 307 (403)
T ss_dssp C
T ss_pred H
Confidence 3
No 4
>3l2n_A Peptidase M14, carboxypeptidase A; putative carboxypeptidase A, structural genomics, joint CENT structural genomics, JCSG; 2.39A {Shewanella denitrificans}
Probab=96.69 E-value=0.0011 Score=55.20 Aligned_cols=76 Identities=12% Similarity=0.155 Sum_probs=60.8
Q ss_pred hhhHHhHcCCCccCCCCeecccccccccceEE-----EeeeecceeeeeeeccccccccCC---ccccchhHHHHHHHHH
Q psy3963 2 LSRLLEQCALSFDPKSSHYKIERSKESTARIT-----IWREYGVVRSYTMESTYCGFDQGS---FKIGTKESMKIVRGLI 73 (128)
Q Consensus 2 ~P~lls~~~p~Fs~~~C~F~v~k~Ke~TaRV~-----~~~~~gi~~syTlE~Sf~G~dlg~---~kf~~kdL~pigk~L~ 73 (128)
++..+++.+|.|. +.|.+.+.+.+.+++. ++.++|+ -+||+|.+|+|.+.++ +.|..+++.++|+.++
T Consensus 308 ~~~al~~~~~~~g---~~y~~~~~~~~~~~~~~a~d~~~~~~g~-~s~T~El~~~~~~~~~~~~~g~~~~~~~~~g~e~l 383 (395)
T 3l2n_A 308 FVAALSLASADFQ---TEFGYDKDEPGKANLTVACNWVANTFKC-LSNTLEMPFKDNANLADPFQGWSPERSVYFGEASL 383 (395)
T ss_dssp HHHHHHHHCTTBC---SSSSCCCCCTTCCCTTSHHHHHHHHHTC-EEEEEEEESSCCGGGCCTTTSSCHHHHHHHHHHHH
T ss_pred HHHHHHhhchhcC---CcceeCCCCCCccccchHHHHHHHhcCc-EEEEEEecCcccCCCCCcccCcCHHHHHHHHHHHH
Confidence 4567888888874 7888888877766655 5566788 9999999999997643 4588999999999999
Q ss_pred HHHHHHhc
Q psy3963 74 EFCTRVLK 81 (128)
Q Consensus 74 e~l~~ll~ 81 (128)
+.|..+++
T Consensus 384 ~al~~~~~ 391 (395)
T 3l2n_A 384 IAMRAVID 391 (395)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHHH
Confidence 99987664
No 5
>3k2k_A Putative carboxypeptidase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; 2.49A {Burkholderia mallei atcc 23344}
Probab=95.22 E-value=0.015 Score=48.49 Aligned_cols=76 Identities=11% Similarity=0.083 Sum_probs=58.8
Q ss_pred hhhHHhHcCCCccCCCCeecccccccccceEE-----EeeeecceeeeeeeccccccccCCc---cccchhHHHHHHHHH
Q psy3963 2 LSRLLEQCALSFDPKSSHYKIERSKESTARIT-----IWREYGVVRSYTMESTYCGFDQGSF---KIGTKESMKIVRGLI 73 (128)
Q Consensus 2 ~P~lls~~~p~Fs~~~C~F~v~k~Ke~TaRV~-----~~~~~gi~~syTlE~Sf~G~dlg~~---kf~~kdL~pigk~L~ 73 (128)
++..|.+.+|.|. ..|.+..++.++++.. ++.++|+ -+||+|.+|.+.|.++. -++.+...++|..++
T Consensus 317 ~~~al~~~~~~~g---~~y~~~~~~~~~~~~~~a~~~~~~~~g~-~s~TlEmpf~~n~~~p~~~~g~~~~r~~~~g~~~l 392 (403)
T 3k2k_A 317 FIDSFKRASPDFQ---DEHGYPPGKYREDAFKLASKYIGHRFGC-LSLTLEMPFKDNANLPDEHIGWNGARSASLGAAML 392 (403)
T ss_dssp HHHHHHHHCTTBC---SSSCCCGGGSTTTGGGSHHHHHHHHHCS-EEEEEEEESSCCTTSCCTTTSSCHHHHHHHHHHHH
T ss_pred HHHHHHhhchhcC---CeEEecCcCCcccccchhHHHHHhhcCC-eEEEEecCCCCcCCCCCcccCcCHHHHHHHHHHHH
Confidence 3456677777763 6778777777777765 4466788 89999999999987752 388999999999999
Q ss_pred HHHHHHhc
Q psy3963 74 EFCTRVLK 81 (128)
Q Consensus 74 e~l~~ll~ 81 (128)
+.|..+++
T Consensus 393 ~a~~~~~~ 400 (403)
T 3k2k_A 393 GAILEHVR 400 (403)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 98877653
No 6
>2qvp_A Uncharacterized protein; putative metallopeptidase, structural genomics, joint center structural genomics, JCSG; HET: MSE; 2.00A {Shewanella amazonensis}
Probab=93.88 E-value=0.025 Score=44.08 Aligned_cols=57 Identities=12% Similarity=0.055 Sum_probs=42.0
Q ss_pred ccccccCCcccc--------chhHHHHHHHHHHHHHHHhcCCCeEEEecCCCCCccceeEeccCCC
Q psy3963 50 YCGFDQGSFKIG--------TKESMKIVRGLIEFCTRVLKKTPYFYCDFHGHSLKKNIFLYGCSSQ 107 (128)
Q Consensus 50 f~G~dlg~~kf~--------~kdL~pigk~L~e~l~~ll~~~~~~y~D~HGHSrk~N~F~yGc~~~ 107 (128)
-.|.|+|| .|+ ...-.+.++++.+++..+.+.++.+++|+|+.++....++|++...
T Consensus 121 ~~g~DlNR-~f~~~~~~~~~~~~~~pE~~a~~~~~~~~~~~~~~~~idlHs~~~~~~~~~~~~~~~ 185 (275)
T 2qvp_A 121 ELGENPNR-GFFIENGKAKPGADTSAEGRILLEHAHLLQVASRDGILTCHEDVLMTDTYVYTFEPS 185 (275)
T ss_dssp TTSCCTTS-CCEEETTEEECCTTCCHHHHHHHHTHHHHHHHTTTCEEEEEEETTCSSBEEEEECSS
T ss_pred CCCccCCC-CCCcccccCCCCCCCcHHHHHHHHHHHHhccCCceEEEEecCCCCCCCeEEecCCCC
Confidence 46899996 222 1124677888888876544468999999999998888888887654
No 7
>4a37_A Metallo-carboxypeptidase; metallo-protease, hydrolase; 1.60A {Pseudomonas aeruginosa} PDB: 4a38_A 4a39_A*
Probab=93.10 E-value=0.085 Score=43.57 Aligned_cols=64 Identities=13% Similarity=0.200 Sum_probs=50.4
Q ss_pred CCeecccccccccceEEEe-----eeecceeeeeeeccccccccCC---ccccchhHHHHHHHHHHHHHHHhc
Q psy3963 17 SSHYKIERSKESTARITIW-----REYGVVRSYTMESTYCGFDQGS---FKIGTKESMKIVRGLIEFCTRVLK 81 (128)
Q Consensus 17 ~C~F~v~k~Ke~TaRV~~~-----~~~gi~~syTlE~Sf~G~dlg~---~kf~~kdL~pigk~L~e~l~~ll~ 81 (128)
.+.|....++.++++..+. .++|+ .+||+|++|.|.+.++ +.++.+...++|..+++.|..+++
T Consensus 314 ~t~~~y~~~~~~~~~l~~a~~~~~~~~g~-~s~TlEmpf~~~~~~~~~~~g~~~~~~~~~g~~~l~~l~~~~~ 385 (388)
T 4a37_A 314 QIRHGYPRSAPGQANLALACNFVGQTYDC-LAFTIEMPFKDHDDNPEPGTGWSGARSKRLGQDVLSTLAVLVD 385 (388)
T ss_dssp CSSSCSCCCCTTCCCTTSHHHHHHHHHTC-EEEEEEEESSCCTTSCCTTTCSCHHHHHHHHHHHHHHHHHHGG
T ss_pred CCCcccCCcCCCchhhhHHHHHHHhhcCc-eEEEEeCCCCCCCCCCCcCcCcCHHHHHHHHHHHHHHHHHHHH
Confidence 3567777777788776543 34677 9999999999998764 348899999999999999987764
No 8
>1dtd_A Carboxypeptidase A2; carboxypeptidase A2, leech carboxypeptidase inhibitor, hydrolase/hydrolase inhibitor complex; HET: GLU; 1.65A {Homo sapiens} SCOP: c.56.5.1
Probab=92.46 E-value=0.14 Score=40.31 Aligned_cols=34 Identities=15% Similarity=0.253 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHHHHhcCCCeEEEecCCCCCccceeEec
Q psy3963 65 SMKIVRGLIEFCTRVLKKTPYFYCDFHGHSLKKNIFLYG 103 (128)
Q Consensus 65 L~pigk~L~e~l~~ll~~~~~~y~D~HGHSrk~N~F~yG 103 (128)
.+|.++++.+++.+. .++.+++|+|+++. +++|.
T Consensus 166 sepEt~a~~~~~~~~--~~~~~~idlHs~~~---~~~~P 199 (303)
T 1dtd_A 166 SEVEVKSIVDFIKSH--GKVKAFIILHSYSQ---LLMFP 199 (303)
T ss_dssp CSHHHHHHHHHHHHH--CCEEEEEEEEESSC---EEEES
T ss_pred CcHHHHHHHHHHHhC--CCeEEEEEeeCCCC---eEEeC
Confidence 567889999988654 57999999999994 45553
No 9
>1h8l_A Carboxypeptidase GP180 residues 503-882; hydrolase, zinc-dependent protease; HET: NAG BMA NDG GEM; 2.6A {Lophonetta specularioides} SCOP: b.3.2.1 c.56.5.1 PDB: 1qmu_A*
Probab=91.26 E-value=0.1 Score=42.51 Aligned_cols=55 Identities=9% Similarity=0.145 Sum_probs=38.2
Q ss_pred eccccccccCCccccch------hHHHHHHHHHHHHHHHhcCCCeEEEecCCCCCccceeEeccCC
Q psy3963 47 ESTYCGFDQGSFKIGTK------ESMKIVRGLIEFCTRVLKKTPYFYCDFHGHSLKKNIFLYGCSS 106 (128)
Q Consensus 47 E~Sf~G~dlg~~kf~~k------dL~pigk~L~e~l~~ll~~~~~~y~D~HGHSrk~N~F~yGc~~ 106 (128)
++...|.|+|| .|+.. -.+|.++++.+++.+ .++.+++|+||+++.- .+-||+..
T Consensus 132 R~n~~GvDLNR-nf~~~~~~~~~~sepEt~a~~~~~~~---~~~~~~idlH~~~~~~-~~py~~~~ 192 (380)
T 1h8l_A 132 RNNSNNYDLNR-NFPDQFFQVTDPPQPETLAVMSWLKT---YPFVLSANLHGGSLVV-NYPFDDDE 192 (380)
T ss_dssp TSCTTSCCGGG-CSCCSSSCCCSCCCHHHHHHHHHHHH---SCEEEEEEEECSEEEE-EESCSCCT
T ss_pred CCCCCCCcccC-CCcccccccCCCCChHHHHHHHHHHh---CCceEEEEEecCCEEE-EecCCCCC
Confidence 34568999995 22221 146788988888765 3789999999999764 45677754
No 10
>3prt_A Carboxypeptidase T; hydrolase; 1.66A {Thermoactinomyces vulgaris} PDB: 1obr_A 3qnv_A
Probab=90.51 E-value=0.21 Score=39.82 Aligned_cols=37 Identities=22% Similarity=0.240 Sum_probs=28.4
Q ss_pred HHHHHHHHHHHHHHHh---cCCCeEEEecCCCCCccceeEecc
Q psy3963 65 SMKIVRGLIEFCTRVL---KKTPYFYCDFHGHSLKKNIFLYGC 104 (128)
Q Consensus 65 L~pigk~L~e~l~~ll---~~~~~~y~D~HGHSrk~N~F~yGc 104 (128)
.+|.++++.+++.+.. ..++.+++|+|+++. +++|..
T Consensus 175 sepEt~a~~~~~~~~~~~~~~~~~~~idlHs~~~---~~~ypy 214 (323)
T 3prt_A 175 SAPETAAMRDFINSRVVGGKQQIKTLITFHTYSE---LILYPY 214 (323)
T ss_dssp CSHHHHHHHHHHHHTEETTEECEEEEEEEEESSS---EEEESC
T ss_pred CcHHHHHHHHHHHHhhhccccCeEEEEEccCCCc---eEEecC
Confidence 4688999999988753 237899999999996 555544
No 11
>1z5r_A Procarboxypeptidase B; exopeptidase, hydrolase; 1.40A {Sus scrofa} SCOP: c.56.5.1 PDB: 1zg7_A* 1zg8_A* 1zg9_A* 2jew_A* 2piy_A* 2piz_A* 2pj0_A* 2pj1_A* 2pj2_A* 2pj3_A* 2pj4_A* 2pj5_A* 2pj6_A* 2pj7_A* 2pj8_A* 2pj9_A* 2pja_A* 2pjb_A* 2pjc_A* 1zli_A ...
Probab=90.32 E-value=0.22 Score=39.16 Aligned_cols=38 Identities=26% Similarity=0.350 Sum_probs=28.0
Q ss_pred hHHHHHHHHHHHHHHHhcCCCeEEEecCCCCCccceeE--eccC
Q psy3963 64 ESMKIVRGLIEFCTRVLKKTPYFYCDFHGHSLKKNIFL--YGCS 105 (128)
Q Consensus 64 dL~pigk~L~e~l~~ll~~~~~~y~D~HGHSrk~N~F~--yGc~ 105 (128)
...|.++++.+++.+. ..++.+++|+|+++ .+++ ||+.
T Consensus 168 ~sepEt~a~~~~~~~~-~~~~~~~idlHs~~---~~~~~Py~~~ 207 (306)
T 1z5r_A 168 ESEKETKALADFIRNN-LSSIKAYLTIHSYS---QMILYPYSYD 207 (306)
T ss_dssp TCSHHHHHHHHHHHHT-TTTEEEEEEEEESS---SEEEESCSSS
T ss_pred CCcHHHHHHHHHHHHh-ccCeEEEEEEeCCC---CeEEeCCCCC
Confidence 3467889999988763 34799999999998 3455 4654
No 12
>2c1c_A Carboxypeptidase B; insect, metalloprotease, insensitive, plant inhibitors, hydrolase; 2.3A {Helicoverpa zea} SCOP: c.56.5.1
Probab=89.03 E-value=0.31 Score=38.37 Aligned_cols=54 Identities=17% Similarity=0.186 Sum_probs=37.3
Q ss_pred ccccccccCC-cc--cc----------------chhHHHHHHHHHHHHHHHhcCCCeEEEecCCCCCccceeE--eccC
Q psy3963 48 STYCGFDQGS-FK--IG----------------TKESMKIVRGLIEFCTRVLKKTPYFYCDFHGHSLKKNIFL--YGCS 105 (128)
Q Consensus 48 ~Sf~G~dlg~-~k--f~----------------~kdL~pigk~L~e~l~~ll~~~~~~y~D~HGHSrk~N~F~--yGc~ 105 (128)
++..|.|+|+ +- +. .....|.++++.+++.+. ..++.+++|+|+++. +++ ||+.
T Consensus 132 ~~~~GvDLNRnf~~~w~~~g~s~~p~~~~y~G~~~~sepEt~al~~~~~~~-~~~~~~~idlHs~~~---~~~~P~~~~ 206 (312)
T 2c1c_A 132 QICRGADGNRNFDFVWNSIGTSNSPCSDIYAGTSAFSEVETRVVRDILHEH-LARMALYLTMHSFGS---MILYPWGHD 206 (312)
T ss_dssp GTSCCCCGGGCSSSSTTSSSCBSCTTSTTBCCSSTTCSHHHHHHHHHHHHH-GGGEEEEEEEEESSS---EEEESCTTT
T ss_pred ccccCCCcccCCCcCCCCCCCCCCCCccccCCCCCCCCHHHHHHHHHHHhc-cCCeeEEEEEecCCC---eEEeCCCCC
Confidence 5678999995 21 11 123467889999988764 347899999999984 455 5654
No 13
>1aye_A PCPA2, procarboxypeptidase A2; serine protease, zymogen, hydrolase; 1.80A {Homo sapiens} SCOP: c.56.5.1 d.58.3.1 PDB: 1o6x_A
Probab=88.73 E-value=0.36 Score=39.80 Aligned_cols=33 Identities=15% Similarity=0.299 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHHHHhcCCCeEEEecCCCCCccceeEe
Q psy3963 65 SMKIVRGLIEFCTRVLKKTPYFYCDFHGHSLKKNIFLY 102 (128)
Q Consensus 65 L~pigk~L~e~l~~ll~~~~~~y~D~HGHSrk~N~F~y 102 (128)
..|.++++.+++.+. .++.+++|+||++ ++++|
T Consensus 264 sepEt~al~~~~~~~--~~~~~~idlHs~~---~~~~~ 296 (401)
T 1aye_A 264 SEVEVKSIVDFIKSH--GKVKAFIILHSYS---QLLMF 296 (401)
T ss_dssp CSHHHHHHHHHHHHH--CCEEEEEEEEESS---CEEEE
T ss_pred cCHHHHHHHHHHHcc--CCEEEEEEEcCCC---CEEEe
Confidence 567899999988764 5799999999999 46664
No 14
>3d4u_A Tafia, carboxypeptidase B2; protease-inhibitor complex, glycoprotein, hydrolase, metal-binding, metalloprotease, protease, secret zymogen; 1.70A {Bos taurus} PDB: 3lms_A
Probab=88.45 E-value=0.36 Score=37.93 Aligned_cols=37 Identities=27% Similarity=0.319 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCeEEEecCCCCCccceeE--eccC
Q psy3963 65 SMKIVRGLIEFCTRVLKKTPYFYCDFHGHSLKKNIFL--YGCS 105 (128)
Q Consensus 65 L~pigk~L~e~l~~ll~~~~~~y~D~HGHSrk~N~F~--yGc~ 105 (128)
..|.++++.+++.+. ..++.+++|+|+++ .+++ ||+.
T Consensus 171 sepEt~a~~~~~~~~-~~~~~~~idlH~~~---~~~~~Py~~~ 209 (309)
T 3d4u_A 171 SEPEVKAVADFLRRN-IKHIKAYISMHSYS---QKIVFPYSYS 209 (309)
T ss_dssp CSHHHHHHHHHHHHT-TTTEEEEEEEEESS---SEEEESCSSC
T ss_pred CcHHHHHHHHHHHhc-ccceEEEEEEeCCC---cEEEeCCCCC
Confidence 457889999888763 33689999999998 4555 4553
No 15
>1jqg_A Carboxypeptidase A; Pro-protein, hydrolase; 2.50A {Helicoverpa armigera} SCOP: c.56.5.1 d.58.3.1
Probab=88.11 E-value=0.37 Score=40.15 Aligned_cols=38 Identities=18% Similarity=0.287 Sum_probs=29.1
Q ss_pred hHHHHHHHHHHHHHHHhcCCCeEEEecCCCCCccceeEeccC
Q psy3963 64 ESMKIVRGLIEFCTRVLKKTPYFYCDFHGHSLKKNIFLYGCS 105 (128)
Q Consensus 64 dL~pigk~L~e~l~~ll~~~~~~y~D~HGHSrk~N~F~yGc~ 105 (128)
...|.++++.+++.+. ..++.+++|+|+++ ..++|...
T Consensus 280 ~sepEt~al~~~~~~~-~~~~~~~idlHs~~---~~~~~Py~ 317 (433)
T 1jqg_A 280 FSEPESSVIRDIIAEH-RNRMALYLDIHSFG---SMILYGYG 317 (433)
T ss_dssp TCSHHHHHHHHHHHHT-TTTEEEEEEEEESS---SEEEESCT
T ss_pred CccHHHHHHHHHHHHh-cCCeEEEEEEcCCC---CEEEeCCC
Confidence 3567889999988763 35799999999999 46677554
No 16
>3mn8_A LP15968P; catalytic domain of alpha/beta-hydrolase fold, C-terminal, A transthyretin-like domain, hydrolase; HET: NAG GEM; 2.70A {Drosophila melanogaster}
Probab=87.36 E-value=0.43 Score=39.79 Aligned_cols=56 Identities=14% Similarity=0.277 Sum_probs=39.3
Q ss_pred eccccccccCC-cc--cc--------chhHHHHHHHHHHHHHHHhcCCCeEEEecCCCCCccceeEeccCCCC
Q psy3963 47 ESTYCGFDQGS-FK--IG--------TKESMKIVRGLIEFCTRVLKKTPYFYCDFHGHSLKKNIFLYGCSSQE 108 (128)
Q Consensus 47 E~Sf~G~dlg~-~k--f~--------~kdL~pigk~L~e~l~~ll~~~~~~y~D~HGHSrk~N~F~yGc~~~~ 108 (128)
.++-.|.|+|| |- +. ....+|.++++.+++.+ .++.+++|+||++. +++|....+.
T Consensus 165 R~n~~GvDLNRnf~~~w~~~~~~~g~~~~sepEt~al~~~~~~---~~~~~~idlHs~~~---~~~yPy~~~~ 231 (435)
T 3mn8_A 165 RGNAANIDLNRDFPDRLEQSHVHQLRAQSRQPETAALVNWIVS---KPFVLSANFHGGAV---VASYPYDNSL 231 (435)
T ss_dssp TSCTTCCCGGGCSCCTTC--------CCCSCHHHHHHHHHHTT---SCCCEEEEEECSSC---EEEESCSCCS
T ss_pred CccccCCCcccCCCcccCcccccCCCCccchHHHHHHHHHHhh---cCCEEEEEEeCCCe---EEEcCCCCCc
Confidence 45678999995 22 11 12356788988887654 47899999999986 6677665543
No 17
>1kwm_A Procarboxypeptidase B; hydrolase; HET: CIT; 1.60A {Homo sapiens} SCOP: c.56.5.1 d.58.3.1 PDB: 3glj_A 1nsa_A 1pba_A
Probab=86.89 E-value=0.48 Score=39.01 Aligned_cols=35 Identities=26% Similarity=0.376 Sum_probs=27.2
Q ss_pred hHHHHHHHHHHHHHHHhcCCCeEEEecCCCCCccceeEe
Q psy3963 64 ESMKIVRGLIEFCTRVLKKTPYFYCDFHGHSLKKNIFLY 102 (128)
Q Consensus 64 dL~pigk~L~e~l~~ll~~~~~~y~D~HGHSrk~N~F~y 102 (128)
...|.++++.+++.+. ..++.+++|+|+++ +.++|
T Consensus 263 ~sepEt~al~~~~~~~-~~~~~~~idlHs~~---~~~~~ 297 (402)
T 1kwm_A 263 ESEKETKALADFIRNK-LSSIKAYLTIHSYS---QMMIY 297 (402)
T ss_dssp TCSHHHHHHHHHHHHT-TTTEEEEEEEEESS---CEEEE
T ss_pred CCcHHHHHHHHHHHhh-ccCeeEEEEEeCCC---CEEEe
Confidence 3467899999988764 34799999999998 56664
No 18
>1m4l_A Carboxypeptidase A; metalloproteinase, metalloexoproteinase, hydrolase; 1.25A {Bos taurus} SCOP: c.56.5.1 PDB: 1cpx_A 1arl_A 1f57_A 2rfh_A* 3i1u_A* 1arm_A 1ell_P 1elm_P 1ee3_P 1zlh_A 2abz_A 3hlp_A 3huv_A 1yme_A* 3fvl_A* 3fx6_A* 2ctc_A* 1hdq_A 2ctb_A* 3kgq_A* ...
Probab=86.67 E-value=0.51 Score=37.18 Aligned_cols=34 Identities=21% Similarity=0.361 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHHHHhcCCCeEEEecCCCCCccceeEec
Q psy3963 65 SMKIVRGLIEFCTRVLKKTPYFYCDFHGHSLKKNIFLYG 103 (128)
Q Consensus 65 L~pigk~L~e~l~~ll~~~~~~y~D~HGHSrk~N~F~yG 103 (128)
.+|.++++.+++.. ..++.+++|+|+++ .+++|-
T Consensus 172 sepEt~al~~~~~~--~~~~~~~idlH~~~---~~~~~P 205 (307)
T 1m4l_A 172 SEVEVKSIVDFVKD--HGNFKAFLSIHSYS---QLLLYP 205 (307)
T ss_dssp CSHHHHHHHHHHHH--HCCEEEEEEEEESS---CEEEES
T ss_pred CcHHHHHHHHHHHh--CCCeEEEEEEecCC---CEEEeC
Confidence 46788998888832 34799999999998 466643
No 19
>2bo9_A Carboxypeptidase A4; metallocarboxypeptidase, X-RAY endogenous protein inhibitor, metalloprotease carboxypeptidase, hydrolase; HET: NAG; 1.6A {Homo sapiens} SCOP: c.56.5.1 PDB: 4a94_A 2pcu_A*
Probab=86.35 E-value=0.52 Score=37.02 Aligned_cols=36 Identities=25% Similarity=0.427 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHHHHhcCCCeEEEecCCCCCccceeEe--ccC
Q psy3963 65 SMKIVRGLIEFCTRVLKKTPYFYCDFHGHSLKKNIFLY--GCS 105 (128)
Q Consensus 65 L~pigk~L~e~l~~ll~~~~~~y~D~HGHSrk~N~F~y--Gc~ 105 (128)
..|.++++.+++ +. ..++.+++|+|+++ .+++| |+.
T Consensus 171 sepEt~a~~~~~-~~-~~~~~~~idlHs~~---~~~~~P~~~~ 208 (308)
T 2bo9_A 171 SEVEVKSVVDFI-QK-HGNFKGFIDLHSYS---QLLMYPYGYS 208 (308)
T ss_dssp CSHHHHHHHHHH-HH-HCCEEEEEEEEESS---SEEEESCSSC
T ss_pred CCHHHHHHHHHH-Hh-CCCeEEEEEEecCC---cEEEeCCCCC
Confidence 467889888888 42 34689999999998 46664 554
No 20
>3b2y_A Metallopeptidase containing CO-catalytic metalloa site; metallopeptidase containing CO-catalytic metalloactive site; 1.74A {Shewanella denitrificans OS217} PDB: 3ieh_A*
Probab=85.50 E-value=0.22 Score=39.05 Aligned_cols=56 Identities=11% Similarity=0.110 Sum_probs=34.9
Q ss_pred cccccccCC-cc--ccchhHHHHH-------HHHHHHHHHHhcCCCeEEEecCCCCCccceeEeccCCC
Q psy3963 49 TYCGFDQGS-FK--IGTKESMKIV-------RGLIEFCTRVLKKTPYFYCDFHGHSLKKNIFLYGCSSQ 107 (128)
Q Consensus 49 Sf~G~dlg~-~k--f~~kdL~pig-------k~L~e~l~~ll~~~~~~y~D~HGHSrk~N~F~yGc~~~ 107 (128)
+-.|.|+|+ +. .+...-+|.+ +++++++.+ ..+.++.|+|+++....++.||+...
T Consensus 121 n~~gvDLNRnf~~~~~~~~sepEt~~l~~~~~a~~~~~~~---~~~~~~id~H~~~~~~g~y~~~~~~~ 186 (275)
T 3b2y_A 121 NRFGENPNRGFTLENGKPTPNEHTSLEGKLLLEHAQLLCA---ASRDGILTCHEDVLMNETYVYSFEPT 186 (275)
T ss_dssp CTTSCCTTSCCCC---------CCCHHHHHHHTTHHHHHH---HTTTEEEEEEEETTCSSBEEEEECSS
T ss_pred CCCCCccCcCCCCCCCCCCCCCCccccchHHHHHHHHHHh---cCCcEEEECCCCCcCCeEEecCCCCC
Confidence 468999996 22 1111123333 555555443 57899999999976778999998754
No 21
>2boa_A Carboxypeptidase A4; metalloprocarboxypeptidase, X-RAY zymogen, metalloprotease, exopropeptidase, hydrolase; HET: NAG; 2.20A {Homo sapiens} SCOP: c.56.5.1 d.58.3.1
Probab=85.40 E-value=0.59 Score=38.48 Aligned_cols=37 Identities=24% Similarity=0.407 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHHHHhcCCCeEEEecCCCCCccceeE--eccCC
Q psy3963 65 SMKIVRGLIEFCTRVLKKTPYFYCDFHGHSLKKNIFL--YGCSS 106 (128)
Q Consensus 65 L~pigk~L~e~l~~ll~~~~~~y~D~HGHSrk~N~F~--yGc~~ 106 (128)
..|.++++.+++ +. ..++.+++|+|+++ +.++ ||+..
T Consensus 267 sepEt~al~~~~-~~-~~~~~~~idlHs~~---~~~l~Py~~~~ 305 (404)
T 2boa_A 267 SEVEVKSVVDFI-QK-HGNFKGFIDLHSYS---QLLMYPYGYSV 305 (404)
T ss_dssp CSHHHHHHHHHH-HH-HCCEEEEEEEEESS---CEEEESCSSCS
T ss_pred CCHHHHHHHHHH-Hc-CCCEEEEEEEeCCC---CEEEeccCCCC
Confidence 457889999888 43 34689999999998 5566 46543
No 22
>1uwy_A Carboxypeptidase M; metallopeptidase, GPI-anchor, metalloprotease, zinc, lipoprotein, hydrolase, structural proteomics in europe, spine; HET: NAG; 3.0A {Homo sapiens} SCOP: b.3.2.1 c.56.5.1
Probab=84.99 E-value=0.53 Score=38.96 Aligned_cols=45 Identities=13% Similarity=0.220 Sum_probs=33.0
Q ss_pred ccccccccCCccccc------hhHHHHHHHHHHHHHHHhcCCCeEEEecCCCCCc
Q psy3963 48 STYCGFDQGSFKIGT------KESMKIVRGLIEFCTRVLKKTPYFYCDFHGHSLK 96 (128)
Q Consensus 48 ~Sf~G~dlg~~kf~~------kdL~pigk~L~e~l~~ll~~~~~~y~D~HGHSrk 96 (128)
++..|.|+|| .|+. ....|.++++.+++.+. ++.+++|+||++..
T Consensus 128 ~n~~GvDLNR-nf~~~w~~~~~~sepEt~al~~~~~~~---~~~~~idlHs~~~~ 178 (426)
T 1uwy_A 128 ENYNQYDLNR-NFPDAFEYNNVSRQPETVAVMKWLKTE---TFVLSANLHGGALV 178 (426)
T ss_dssp SCTTSCCTTS-CSCCSSSCCCCCCCHHHHHHHHHHHHS---CEEECCEEECSEEE
T ss_pred CCCcCCCCCC-CCCCCCCcCCccccHHHHHHHHHHhcc---CeEEEEEEcCCCeE
Confidence 4568999995 2332 23567888888877653 78999999999963
No 23
>2nsm_A Carboxypeptidase N catalytic chain; caroxypeptidase, zinc peptidase, transthyretin-like domain, processing, peptide modification, hydrolase; HET: NAG; 2.10A {Homo sapiens}
Probab=83.10 E-value=0.74 Score=38.15 Aligned_cols=36 Identities=17% Similarity=0.226 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHHHHhcCCCeEEEecCCCCCccceeEe--ccCC
Q psy3963 65 SMKIVRGLIEFCTRVLKKTPYFYCDFHGHSLKKNIFLY--GCSS 106 (128)
Q Consensus 65 L~pigk~L~e~l~~ll~~~~~~y~D~HGHSrk~N~F~y--Gc~~ 106 (128)
.+|.++++.+++.+. ++.+++|+||++. +++| |...
T Consensus 174 sepEt~al~~~~~~~---~~~~~idlHs~~~---~~~yPy~~~~ 211 (439)
T 2nsm_A 174 VEPETRAVIRWMHSF---NFVLSANLHGGAV---VANYPYDKSF 211 (439)
T ss_dssp SCHHHHHHHHHHHHS---CEEEEEEEECSEE---EEEESCCSCC
T ss_pred CCHHHHHHHHHHHhC---CcEEEEEcccCCE---EEEecCCCCc
Confidence 467889999988764 7899999999986 4444 6543
No 24
>3dgv_A TAFI, carboxypeptidase B2; blood coagulation, fibrinolysis, protein S glycoprotein, hydrolase, metal-binding, metalloprotease, PR secreted, zymogen; HET: NAG NDG FUL BMA; 2.50A {Bos taurus} PDB: 3osl_A 3d68_A* 3d66_A* 3d67_A*
Probab=76.81 E-value=1.9 Score=35.63 Aligned_cols=34 Identities=24% Similarity=0.278 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHHHHhcCCCeEEEecCCCCCccceeEe
Q psy3963 65 SMKIVRGLIEFCTRVLKKTPYFYCDFHGHSLKKNIFLY 102 (128)
Q Consensus 65 L~pigk~L~e~l~~ll~~~~~~y~D~HGHSrk~N~F~y 102 (128)
..|.++++.+++.+. ...+.+|.|+|+.+. +++|
T Consensus 263 sepEt~al~~~i~~~-~~~~~~~i~lHs~~~---~i~y 296 (401)
T 3dgv_A 263 SEPEVKAVADFLRRN-IKHIKAYISMHSYSQ---KIVF 296 (401)
T ss_dssp CSHHHHHHHHHHHHT-TTTEEEEEEEEESSC---EEEE
T ss_pred cCHHHHHHHHHHHHh-CcCceEEEEEecCCC---EEEe
Confidence 478999999998864 347889999999985 6664
No 25
>1pca_A Procarboxypeptidase A PCPA; hydrolase(C-terminal peptidase); HET: CIT; 2.00A {Sus scrofa} SCOP: d.58.3.1 PDB: 1pyt_A
Probab=76.65 E-value=0.51 Score=38.96 Aligned_cols=29 Identities=17% Similarity=0.211 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCeEEEecCCCCC
Q psy3963 65 SMKIVRGLIEFCTRVLKKTPYFYCDFHGHSL 95 (128)
Q Consensus 65 L~pigk~L~e~l~~ll~~~~~~y~D~HGHSr 95 (128)
..|.++++.+++ +. ..++.+++|+|+++.
T Consensus 267 sepEt~al~~~~-~~-~~~~~~~idlHs~~~ 295 (403)
T 1pca_A 267 SEVEVKSITDFV-KN-NGNIKAFISIHSYSQ 295 (403)
T ss_dssp -------------------------------
T ss_pred CcHHHHHHHHHH-Hh-cCCeEEEEEEcCCCC
Confidence 456788888877 31 236899999999995
No 26
>3v38_A Carboxypeptidase T; hydrolase; HET: GOL; 1.50A {Thermoactinomyces vulgaris} PDB: 1obr_A 3qnv_A 3prt_A
Probab=65.06 E-value=3.1 Score=33.34 Aligned_cols=39 Identities=21% Similarity=0.247 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHHHHHh---cCCCeEEEecCCCCCccceeEeccCC
Q psy3963 65 SMKIVRGLIEFCTRVL---KKTPYFYCDFHGHSLKKNIFLYGCSS 106 (128)
Q Consensus 65 L~pigk~L~e~l~~ll---~~~~~~y~D~HGHSrk~N~F~yGc~~ 106 (128)
.+|.++++.+++.+.. ..++.+|.|+|+.| ..++|....
T Consensus 175 sEpEt~av~~~i~~~~~~~~~~~~~~i~~Hs~~---~~il~Pyg~ 216 (326)
T 3v38_A 175 SAPETAAMRDFINSRVVGGKQQIKTLITFHTYS---ELILYPYGY 216 (326)
T ss_dssp CSHHHHHHHHHHHHTEETTEECEEEEEEEEESS---SEEEESCSS
T ss_pred ccHHHHHHHHHHHhhccccccCeEEEEEecCCC---CEEEecCCC
Confidence 5689999999998752 24799999999976 456665543
No 27
>1dtd_A Carboxypeptidase A2; carboxypeptidase A2, leech carboxypeptidase inhibitor, hydrolase/hydrolase inhibitor complex; HET: GLU; 1.65A {Homo sapiens} SCOP: c.56.5.1
Probab=43.62 E-value=28 Score=26.93 Aligned_cols=40 Identities=18% Similarity=0.255 Sum_probs=28.1
Q ss_pred ecceeeeeeeccccccccCCccccchhHHHHHHHHHHHHHHH
Q psy3963 38 YGVVRSYTMESTYCGFDQGSFKIGTKESMKIVRGLIEFCTRV 79 (128)
Q Consensus 38 ~gi~~syTlE~Sf~G~dlg~~kf~~kdL~pigk~L~e~l~~l 79 (128)
.|+..+||+|.+-+|. .| +..+.+++.++++...+.|..+
T Consensus 255 ~g~~~~~t~El~~~g~-~g-f~~p~~~i~~~~~e~~~~l~~~ 294 (303)
T 1dtd_A 255 YGIKYSFAFELRDTGR-YG-FLLPARQILPTAEETWLGLKAI 294 (303)
T ss_dssp HTCCEEEEEEESCSSS-ST-TCCCGGGHHHHHHHHHHHHHHH
T ss_pred cCCcEEEEEEecCCCC-CC-cCCCHHHHHHHHHHHHHHHHHH
Confidence 7899999999987764 22 3466778877776665555543
No 28
>1m4l_A Carboxypeptidase A; metalloproteinase, metalloexoproteinase, hydrolase; 1.25A {Bos taurus} SCOP: c.56.5.1 PDB: 1cpx_A 1arl_A 1f57_A 2rfh_A* 3i1u_A* 1arm_A 1ell_P 1elm_P 1ee3_P 1zlh_A 2abz_A 3hlp_A 3huv_A 1yme_A* 3fvl_A* 3fx6_A* 2ctc_A* 1hdq_A 2ctb_A* 3kgq_A* ...
Probab=39.87 E-value=36 Score=26.36 Aligned_cols=41 Identities=17% Similarity=0.184 Sum_probs=30.3
Q ss_pred eecceeeeeeeccccccccCCccccchhHHHHHHHHHHHHHHH
Q psy3963 37 EYGVVRSYTMESTYCGFDQGSFKIGTKESMKIVRGLIEFCTRV 79 (128)
Q Consensus 37 ~~gi~~syTlE~Sf~G~dlg~~kf~~kdL~pigk~L~e~l~~l 79 (128)
+.|+..+||+|...+|. .| +..+.+++.|+++.+.+.|..+
T Consensus 260 ~~g~~~~~T~El~~~g~-~G-f~lp~~~i~~~~~e~~~~l~~~ 300 (307)
T 1m4l_A 260 NQGIKYSFTFELRDTGR-YG-FLLPASQIIPTAQETWLGVLTI 300 (307)
T ss_dssp HTTCCEEEEEEESCSSS-ST-TSCCGGGHHHHHHHHHHHHHHH
T ss_pred hcCCCEEEEEEecCCCC-CC-CCCCHHHHHHHHHHHHHHHHHH
Confidence 37899999999987653 22 4567788888888777766644
No 29
>1vq8_P 50S ribosomal protein L19E; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: a.94.1.1 PDB: 1vq4_P* 1vq5_P* 1vq6_P* 1vq7_P* 1s72_P* 1vq9_P* 1vqk_P* 1vql_P* 1vqm_P* 1vqn_P* 1vqo_P* 1vqp_P* 1yhq_P* 1yi2_P* 1yij_P* 1yit_P* 1yj9_P* 1yjn_P* 1yjw_P* 2otj_P* ...
Probab=39.29 E-value=15 Score=26.83 Aligned_cols=48 Identities=10% Similarity=0.025 Sum_probs=36.7
Q ss_pred ccccccccCCccccchhHHHHHHH-HHHHHHHHhcCCCeEEEecCCCCC
Q psy3963 48 STYCGFDQGSFKIGTKESMKIVRG-LIEFCTRVLKKTPYFYCDFHGHSL 95 (128)
Q Consensus 48 ~Sf~G~dlg~~kf~~kdL~pigk~-L~e~l~~ll~~~~~~y~D~HGHSr 95 (128)
||.-||=.++.++++.++.++..+ ..+-+..+++..+++--...||||
T Consensus 12 A~vL~cG~~rVw~DP~~~~eI~~A~sR~~IR~LIkdG~I~~kp~~~~Sr 60 (149)
T 1vq8_P 12 ADVLDVGKNRVWFNPERQGDIADAITREDVRELVDEGAIQAKDKKGNSR 60 (149)
T ss_dssp HHHTTSCGGGEEECGGGHHHHHHCCSHHHHHHHHHTTSEEECCCCCCCC
T ss_pred HHHHCCCcCceecCHHHHHHHHhcccHHHHHHHHHCCCeEeccccCccH
Confidence 455555556678999999887753 356677777888999999999996
No 30
>1z5r_A Procarboxypeptidase B; exopeptidase, hydrolase; 1.40A {Sus scrofa} SCOP: c.56.5.1 PDB: 1zg7_A* 1zg8_A* 1zg9_A* 2jew_A* 2piy_A* 2piz_A* 2pj0_A* 2pj1_A* 2pj2_A* 2pj3_A* 2pj4_A* 2pj5_A* 2pj6_A* 2pj7_A* 2pj8_A* 2pj9_A* 2pja_A* 2pjb_A* 2pjc_A* 1zli_A ...
Probab=36.41 E-value=46 Score=25.61 Aligned_cols=41 Identities=20% Similarity=0.156 Sum_probs=28.9
Q ss_pred ecceeeeeeeccccccccCCccccchhHHHHHHHHHHHHHHHh
Q psy3963 38 YGVVRSYTMESTYCGFDQGSFKIGTKESMKIVRGLIEFCTRVL 80 (128)
Q Consensus 38 ~gi~~syTlE~Sf~G~dlg~~kf~~kdL~pigk~L~e~l~~ll 80 (128)
.++..+||+|...+|. .| +..+.+++.++++...+.|..++
T Consensus 259 ~~~~~~~T~El~~~~~-~g-f~~p~~~i~~~~~e~~~~l~~~~ 299 (306)
T 1z5r_A 259 QGIKYSFTFELRDKGR-YG-FILPESQIQATCEETMLAIKYVT 299 (306)
T ss_dssp TTCSEEEEEEESCSSS-ST-TSCCGGGHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEEecCCCC-CC-CCCCHHHHHHHHHHHHHHHHHHH
Confidence 5889999999998762 22 34567778888877666665443
No 31
>3d4u_A Tafia, carboxypeptidase B2; protease-inhibitor complex, glycoprotein, hydrolase, metal-binding, metalloprotease, protease, secret zymogen; 1.70A {Bos taurus} PDB: 3lms_A
Probab=35.46 E-value=49 Score=25.46 Aligned_cols=41 Identities=15% Similarity=0.129 Sum_probs=28.9
Q ss_pred ecceeeeeeeccccccccCCccccchhHHHHHHHHHHHHHHHh
Q psy3963 38 YGVVRSYTMESTYCGFDQGSFKIGTKESMKIVRGLIEFCTRVL 80 (128)
Q Consensus 38 ~gi~~syTlE~Sf~G~dlg~~kf~~kdL~pigk~L~e~l~~ll 80 (128)
.++..+||+|...+|. . .+..+..++.++++...+.|..++
T Consensus 262 ~~~~~~~T~El~~~~~-~-gf~~p~~~i~~~~~e~~~~l~~~~ 302 (309)
T 3d4u_A 262 LGIKYSFTFELRDKGK-Y-GFLLPESYIRPTCSEALVAVAKIA 302 (309)
T ss_dssp HTCSEEEEEEESCSSS-S-TTCCCGGGHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEEecCCCC-C-CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 4888999999998762 1 245677778887777666665443
No 32
>1aye_A PCPA2, procarboxypeptidase A2; serine protease, zymogen, hydrolase; 1.80A {Homo sapiens} SCOP: c.56.5.1 d.58.3.1 PDB: 1o6x_A
Probab=34.44 E-value=46 Score=27.06 Aligned_cols=40 Identities=18% Similarity=0.255 Sum_probs=29.7
Q ss_pred ecceeeeeeeccccccccCCccccchhHHHHHHHHHHHHHHH
Q psy3963 38 YGVVRSYTMESTYCGFDQGSFKIGTKESMKIVRGLIEFCTRV 79 (128)
Q Consensus 38 ~gi~~syTlE~Sf~G~dlg~~kf~~kdL~pigk~L~e~l~~l 79 (128)
.|+..+||+|....|. .| +..+.+++.++++.+...|..+
T Consensus 353 ~g~~~s~T~El~~~g~-~g-f~lp~~~i~~~~~e~~~~l~~~ 392 (401)
T 1aye_A 353 YGIKYSFAFELRDTGR-YG-FLLPARQILPTAEETWLGLKAI 392 (401)
T ss_dssp TTCSEEEEEEESCSSS-ST-TSCCGGGHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEEEeCCCCC-CC-CCCCHHHHHHHHHHHHHHHHHH
Confidence 6899999999988764 23 4567778888887776666544
No 33
>2ehp_A AQ_1627 protein; putative protein, NPPSFA, national project protein structural and functional analyses; 1.30A {Aquifex aeolicus} PDB: 2eiu_A
Probab=33.00 E-value=60 Score=22.65 Aligned_cols=36 Identities=17% Similarity=0.274 Sum_probs=29.5
Q ss_pred eeeeeeeccccccccCCccccchhHHHHHHHHHHHHH
Q psy3963 41 VRSYTMESTYCGFDQGSFKIGTKESMKIVRGLIEFCT 77 (128)
Q Consensus 41 ~~syTlE~Sf~G~dlg~~kf~~kdL~pigk~L~e~l~ 77 (128)
+..||+|-..-|. -|.|-.+.+.|+.+|-+||..+.
T Consensus 2 ~~~~~mEgkv~G~-pG~YPLTaENL~R~GLALCtLl~ 37 (126)
T 2ehp_A 2 PAIFTHEGKVEGV-PGNYPLTAENLFRIGLALCTLWI 37 (126)
T ss_dssp -CCSCTTSCEEEC-TTSTTSSHHHHHHHHHHHHHHHH
T ss_pred CceeeecceEecc-CCcccccHHHHHHHHHHHHHHHH
Confidence 4568888877776 56688999999999999999876
No 34
>2c1c_A Carboxypeptidase B; insect, metalloprotease, insensitive, plant inhibitors, hydrolase; 2.3A {Helicoverpa zea} SCOP: c.56.5.1
Probab=28.67 E-value=58 Score=25.11 Aligned_cols=40 Identities=25% Similarity=0.159 Sum_probs=27.5
Q ss_pred ecceeeeeeeccccccccCC--ccccchhHHHHHHHHHHHHHHH
Q psy3963 38 YGVVRSYTMESTYCGFDQGS--FKIGTKESMKIVRGLIEFCTRV 79 (128)
Q Consensus 38 ~gi~~syTlE~Sf~G~dlg~--~kf~~kdL~pigk~L~e~l~~l 79 (128)
.|+..+||+|...++ .|. +..+.+++.++++...+.|..+
T Consensus 262 ~~~~~~~T~El~~~~--~g~~gf~~p~~~i~~~~~e~~~~l~~~ 303 (312)
T 2c1c_A 262 IGVPLSYTYELPGLS--SGWDGFHLPPQYIEQVCRETWEGIVVG 303 (312)
T ss_dssp TTCSEEEEEEECCSS--SSGGGGSCCGGGHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEEEecCCC--CCCCCccCCHHHHHHHHHHHHHHHHHH
Confidence 588999999998753 232 3355678888777666665544
No 35
>3cdx_A Succinylglutamatedesuccinylase/aspartoacylase; structural genomics, PSI-2, protein structure initiative; 2.10A {Rhodobacter sphaeroides 2}
Probab=27.68 E-value=37 Score=26.99 Aligned_cols=45 Identities=16% Similarity=0.080 Sum_probs=23.5
Q ss_pred cccccCCccccchhHHHHHHHHHHHHHHHhcCCCeEEEecCCCCCc
Q psy3963 51 CGFDQGSFKIGTKESMKIVRGLIEFCTRVLKKTPYFYCDFHGHSLK 96 (128)
Q Consensus 51 ~G~dlg~~kf~~kdL~pigk~L~e~l~~ll~~~~~~y~D~HGHSrk 96 (128)
.|.|+|+ .|+...--.....+.+.+.+.+...+-++.|||+-++-
T Consensus 110 ~~~DLNR-~f~~~~~g~~~~~~a~~~~~~~~~~~d~~iDlHs~~~~ 154 (354)
T 3cdx_A 110 DGRDINR-CFPGDPRGTFSQMLAHFLDSVILPMADISVDMHTAGHS 154 (354)
T ss_dssp TCCCGGG-STTCCTTSCHHHHHHHHHHHTTGGGCSEEEEECCCTTT
T ss_pred CCccccc-cCCCCCCCCHHHHHHHHHHHHHHhcCCEEEEcCCCCCc
Confidence 5889985 33321100112223333333333467788999988754
No 36
>4hhu_A OR280; engineered protein, PSI-biology, structural genomi unknown function; HET: AE4 PG4; 2.00A {Synthetic construct}
Probab=26.17 E-value=41 Score=24.18 Aligned_cols=44 Identities=14% Similarity=0.197 Sum_probs=35.4
Q ss_pred eeecceeeeeeeccccccccCCccccchhHHHHHHHHHHHHHHHhc
Q psy3963 36 REYGVVRSYTMESTYCGFDQGSFKIGTKESMKIVRGLIEFCTRVLK 81 (128)
Q Consensus 36 ~~~gi~~syTlE~Sf~G~dlg~~kf~~kdL~pigk~L~e~l~~ll~ 81 (128)
++|+|.-.||+.-|=.|..- ..|.-.||...-|+|++++.+..+
T Consensus 67 ~efni~v~y~imgsgsgvm~--i~f~gddlea~ekalkemirqark 110 (170)
T 4hhu_A 67 AEFNINVQYQIMGSGSGVMV--IVFEGDDLEALEKALKEMIRQARK 110 (170)
T ss_dssp HHHTCEEEEEEECTTCCEEE--EEEECSCHHHHHHHHHHHHHHHHH
T ss_pred HhcceEEEEEEEeCCceEEE--EEEecCcHHHHHHHHHHHHHHHHh
Confidence 57889999999888766522 458889999999999999997543
No 37
>1kwm_A Procarboxypeptidase B; hydrolase; HET: CIT; 1.60A {Homo sapiens} SCOP: c.56.5.1 d.58.3.1 PDB: 3glj_A 1nsa_A 1pba_A
Probab=26.00 E-value=73 Score=25.81 Aligned_cols=41 Identities=20% Similarity=0.155 Sum_probs=28.6
Q ss_pred ecceeeeeeeccccccccCCccccchhHHHHHHHHHHHHHHHh
Q psy3963 38 YGVVRSYTMESTYCGFDQGSFKIGTKESMKIVRGLIEFCTRVL 80 (128)
Q Consensus 38 ~gi~~syTlE~Sf~G~dlg~~kf~~kdL~pigk~L~e~l~~ll 80 (128)
.|+..+||+|...+|. .| +..+.+++.++++...+.|..++
T Consensus 354 ~~~~~s~T~El~~~g~-~G-f~lp~~~i~~~~~e~~~~l~~~~ 394 (402)
T 1kwm_A 354 QGIRYSFTFELRDTGR-YG-FLLPESQIRATCEETFLAIKYVA 394 (402)
T ss_dssp TTCSEEEEEEESCSSS-SG-GGCCGGGHHHHHHHHHHHHHHHH
T ss_pred cCCcEEEEEEecCCCC-CC-CCCCHHHHHHHHHHHHHHHHHHH
Confidence 4889999999998763 12 34566778888877666665443
No 38
>2ds5_A CLPX, ATP-dependent CLP protease ATP-binding subunit CLPX; treble cleft zinc finger, metal binding protein, protein binding; HET: PG4; 1.50A {Escherichia coli} SCOP: g.39.1.11 PDB: 2ds6_A 2ds8_A 2ds7_A
Probab=24.88 E-value=24 Score=21.06 Aligned_cols=13 Identities=23% Similarity=0.572 Sum_probs=10.3
Q ss_pred eeeccccccccCC
Q psy3963 45 TMESTYCGFDQGS 57 (128)
Q Consensus 45 TlE~Sf~G~dlg~ 57 (128)
++.|||||.....
T Consensus 11 ~~~CSFCGk~~~e 23 (51)
T 2ds5_A 11 LLYCSFCGKSQHE 23 (51)
T ss_dssp CCBCTTTCCBTTT
T ss_pred CcEecCCCCCHHH
Confidence 3689999987765
No 39
>2zkr_p 60S ribosomal protein L19; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=24.80 E-value=22 Score=27.01 Aligned_cols=49 Identities=12% Similarity=0.055 Sum_probs=35.3
Q ss_pred eccccccccCCccccchhHHHHHHH-HHHHHHHHhcCCCeEEEecCCCCC
Q psy3963 47 ESTYCGFDQGSFKIGTKESMKIVRG-LIEFCTRVLKKTPYFYCDFHGHSL 95 (128)
Q Consensus 47 E~Sf~G~dlg~~kf~~kdL~pigk~-L~e~l~~ll~~~~~~y~D~HGHSr 95 (128)
-||.-||=.++.++++.++.++..+ ..+-+..+++..+++.-...||||
T Consensus 11 AA~VL~cG~~rVWlDP~~~~eI~~A~sR~~IR~LIkdG~I~~Kp~~~~SR 60 (196)
T 2zkr_p 11 ASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60 (196)
T ss_dssp HHHHHTSCGGGEEECSTTHHHHHHCCSHHHHHHHHHHTSEEECCCCC-CC
T ss_pred HHHHHCCCcCceecChHHHHHHHHhhhHHHHHHHHHCCCeEecCcccccH
Confidence 3455556556678999998887753 346677777778999999999996
No 40
>1ovx_A ATP-dependent CLP protease ATP-binding subunit CL; treble CLEF zinc finger, homodimer, metal binding protein; NMR {Escherichia coli} SCOP: g.39.1.11
Probab=21.92 E-value=28 Score=22.10 Aligned_cols=14 Identities=21% Similarity=0.534 Sum_probs=10.7
Q ss_pred eeeccccccccCCc
Q psy3963 45 TMESTYCGFDQGSF 58 (128)
Q Consensus 45 TlE~Sf~G~dlg~~ 58 (128)
++.|||||......
T Consensus 18 ~~~CSFCGK~e~eV 31 (67)
T 1ovx_A 18 LLYCSFCGKSQHEV 31 (67)
T ss_dssp CCCCTTTCCCTTTS
T ss_pred CcEecCCCCCHHHH
Confidence 46899999877653
No 41
>2bo9_A Carboxypeptidase A4; metallocarboxypeptidase, X-RAY endogenous protein inhibitor, metalloprotease carboxypeptidase, hydrolase; HET: NAG; 1.6A {Homo sapiens} SCOP: c.56.5.1 PDB: 4a94_A 2pcu_A*
Probab=21.77 E-value=1.2e+02 Score=23.25 Aligned_cols=40 Identities=13% Similarity=0.115 Sum_probs=27.0
Q ss_pred ecceeeeeeeccccccccCCccccchhHHHHHHHHHHHHHHH
Q psy3963 38 YGVVRSYTMESTYCGFDQGSFKIGTKESMKIVRGLIEFCTRV 79 (128)
Q Consensus 38 ~gi~~syTlE~Sf~G~dlg~~kf~~kdL~pigk~L~e~l~~l 79 (128)
.|+..+||+|....|. . .+..+.+++.++++...+.|..+
T Consensus 260 ~~~~~~~T~El~~~~~-~-gf~~p~~~i~~~~~e~~~~l~~~ 299 (308)
T 2bo9_A 260 NGIKFAFTFELRDTGT-Y-GFLLPANQIIPTAEETWLGLKTI 299 (308)
T ss_dssp TTCCEEEEEEESCSSS-S-TTCCCGGGHHHHHHHHHHHHHHH
T ss_pred cCCcEEEEEEecCCCC-C-CCCCCHHHHHHHHHHHHHHHHHH
Confidence 6888999999986652 1 13355577888777666655543
No 42
>3jyw_P 60S ribosomal protein L19; eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus}
Probab=20.53 E-value=31 Score=25.79 Aligned_cols=48 Identities=13% Similarity=0.135 Sum_probs=33.7
Q ss_pred ccccccccCCccccchhHHHHHHH-HHHHHHHHhcCCCeEEEecCCCCC
Q psy3963 48 STYCGFDQGSFKIGTKESMKIVRG-LIEFCTRVLKKTPYFYCDFHGHSL 95 (128)
Q Consensus 48 ~Sf~G~dlg~~kf~~kdL~pigk~-L~e~l~~ll~~~~~~y~D~HGHSr 95 (128)
+|--||=.++.++++.++.++..+ ..|-|..+++..+++--...||||
T Consensus 11 a~vL~cG~~rVWlDP~e~~eIa~A~sR~~IRkLIkdG~I~~kp~~~~Sr 59 (176)
T 3jyw_P 11 ASVVGVGKRKVWLDPNETSEIAQANSRNAIRKLVKNGTIVKKAVTVHSK 59 (176)
T ss_dssp HHHHTCCTTTEECCSSCCHHHHHCCSHHHHHHHHHHTCSEECCCCCCCS
T ss_pred HHHhCCCCCccccChHHHHHHHhhccHHHHHHHHHCCCEEeCCCcCCCh
Confidence 344444445677888888876643 356677777778888899999995
No 43
>2qj8_A MLR6093 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.00A {Mesorhizobium loti}
Probab=20.30 E-value=47 Score=25.98 Aligned_cols=44 Identities=11% Similarity=0.088 Sum_probs=23.3
Q ss_pred cccccCCccccchhHHHHHHHHHHHHHHHhcCCCeEEEecCCCCC
Q psy3963 51 CGFDQGSFKIGTKESMKIVRGLIEFCTRVLKKTPYFYCDFHGHSL 95 (128)
Q Consensus 51 ~G~dlg~~kf~~kdL~pigk~L~e~l~~ll~~~~~~y~D~HGHSr 95 (128)
.|.|+|+ .|+...--.....+...+.+.+..++-++.|||+-++
T Consensus 102 ~~~DLNR-~f~~~~~g~~e~~~a~~~~~~~~~~~d~~iDlHs~~~ 145 (332)
T 2qj8_A 102 DGKNLNR-VFPGRSDGSVSERIADAISRLLLPVVDTVLDLHSFGP 145 (332)
T ss_dssp TCCCTTT-TTTCCTTSCHHHHHHHHHHHHTGGGCSEEEEEEEEET
T ss_pred CCCcccc-cCCCCCCCCHHHHHHHHHHHhhhhcCCEEEECCCCCC
Confidence 5899985 3332110011233334443333346778999998764
Done!